Science.gov

Sample records for 3d phase-field simulations

  1. Surface rippling during solidification of binary polycrystalline alloy: Insights from 3-D phase-field simulations

    NASA Astrophysics Data System (ADS)

    Ankit, Kumar; Xing, Hui; Selzer, Michael; Nestler, Britta; Glicksman, Martin E.

    2017-01-01

    The mechanisms by which crystalline imperfections initiate breakdown of a planar front during directional solidification remain a topic of longstanding interest. Previous experimental findings show that the solid-liquid interface adjacent to a grain boundary provides a potential site where morphological instabilities initiate. However, interpretation of experimental data is difficult for complex 3-D diffusion fields that develop around grain multi-junctions and boundary ridges. We apply a phase-field approach to investigate factors that induce interfacial instabilities during directional solidification of a binary polycrystalline alloy. Using 2-D simulations, we establish the influence of solid-liquid interfacial energies on the spatial localization of initial interfacial perturbations. Based on parametric studies, we predict that grain misorientation and supersaturation in the melt provide major crystal growth factors determining solute segregation responsible for surface rippling. Subsequent breakdown of boundary ridges into periodic rows of hills, as simulated in 3-D, conform well with experiments. Finally, the significance of crystal misorientation relationships is elucidated in inducing spatial alignment of surface ripples.

  2. Non-linear dynamics of viscous bilayers subjected to an electric field: 3D phase field simulations

    NASA Astrophysics Data System (ADS)

    Dritselis, Christos; Karapetsas, George; Bontozoglou, Vasilis

    2014-11-01

    The scope of this work is to investigate the non-linear dynamics of the electro-hydrodynamic instability of a bilayer of immiscible liquids. We consider the case of two viscous films which is separated from the top electrode by air. We assume that the liquids are perfect dielectrics and consider the case of both flat and patterned electrodes. We develop a computational model using the diffuse interface method and carry out 3D numerical simulations fully accounting for the flow and electric field in all phases. We perform a parametric study and investigate the influence of the electric properties of fluids, applied voltage and various geometrical characteristics of the mask. The authors acknowledge the support by the General Secretariat of Research and Technology of Greece under the action ``Supporting Postdoctoral Researchers'' (Grant Number PE8/906), co-funded by the European Social Fund and National Resources.

  3. 3D Surgical Simulation

    PubMed Central

    Cevidanes, Lucia; Tucker, Scott; Styner, Martin; Kim, Hyungmin; Chapuis, Jonas; Reyes, Mauricio; Proffit, William; Turvey, Timothy; Jaskolka, Michael

    2009-01-01

    This paper discusses the development of methods for computer-aided jaw surgery. Computer-aided jaw surgery allows us to incorporate the high level of precision necessary for transferring virtual plans into the operating room. We also present a complete computer-aided surgery (CAS) system developed in close collaboration with surgeons. Surgery planning and simulation include construction of 3D surface models from Cone-beam CT (CBCT), dynamic cephalometry, semi-automatic mirroring, interactive cutting of bone and bony segment repositioning. A virtual setup can be used to manufacture positioning splints for intra-operative guidance. The system provides further intra-operative assistance with the help of a computer display showing jaw positions and 3D positioning guides updated in real-time during the surgical procedure. The CAS system aids in dealing with complex cases with benefits for the patient, with surgical practice, and for orthodontic finishing. Advanced software tools for diagnosis and treatment planning allow preparation of detailed operative plans, osteotomy repositioning, bone reconstructions, surgical resident training and assessing the difficulties of the surgical procedures prior to the surgery. CAS has the potential to make the elaboration of the surgical plan a more flexible process, increase the level of detail and accuracy of the plan, yield higher operative precision and control, and enhance documentation of cases. Supported by NIDCR DE017727, and DE018962 PMID:20816308

  4. Memory Optimization for Phase-field Simulations

    SciTech Connect

    Derek Gaston; John Peterson; Andrew Slaughter; Cody Permann; David Andrs

    2014-08-01

    Phase-field simulations are computationally and memory intensive applications. Many of the phase-field simulations being conducted in support of NEAMS were not capable of running on “normal clusters” with 2-4GB of RAM per core, and instead required specialized “big-memory” clusters with 64GB per core. To address this issue, the MOOSE team developed a new Python-based utility called MemoryLogger, and applied it to locate, diagnose, and eradicate memory bottlenecks within the MOOSE framework. MemoryLogger allows for a better understanding of the memory usage of an application being run in parallel across a cluster. Memory usage information is captured for every individual process in a parallel job, and communicated to the head node of the cluster. Console text output from the application itself is automatically matched with this memory usage information to produce a detailed picture of memory usage over time, making it straightforward to identify the subroutines which contribute most to the application’s peak memory usage. The information produced by the MemoryLogger quickly and effectively narrows the search for memory optimizations to the most data-intensive parts of the simulation.

  5. 3D phase-field modelling of dislocation loop sink strengths

    NASA Astrophysics Data System (ADS)

    Thuinet, L.; Rouchette, H.; Legris, A.

    2017-01-01

    This work presents a 3D phase-field model to correctly evaluate dislocation loop sink strength. This method is applied to a wide range of microstructures (dislocation loops of various types with isotropic or anisotropic elasticity, like in Zr, cohabitation of different types of loop in the same calculation domain), which allows to exhibit several original results. Among them, in the case of isotropic elasticity, our model shows that the sink strength of vacancy loops is higher than that of interstitial ones for low loop radii. In the case of Zr, the effect on sink biases of the shape anisotropy of self-interstitial atoms, already exhibited in the case of straight dislocations, is enhanced for loops and stabilizes basal vacancy and prism-plane interstitial ones. Moreover, isotropic elastic interactions promote the coexistence of parallel vacancy and interstitial loops. This result is still valid in the case of prism-plane loops in Zr, which could provide explanations to several experimental facts.

  6. 3D electrohydrodynamic simulation of electrowetting displays

    NASA Astrophysics Data System (ADS)

    Hsieh, Wan-Lin; Lin, Chi-Hao; Lo, Kuo-Lung; Lee, Kuo-Chang; Cheng, Wei-Yuan; Chen, Kuo-Ching

    2014-12-01

    The fluid dynamic behavior within a pixel of an electrowetting display (EWD) is thoroughly investigated through a 3D simulation. By coupling the electrohydrodynamic (EHD) force deduced from the Maxwell stress tensor with the laminar phase field of the oil-water dual phase, the complete switch processes of an EWD, including the break-up and the electrowetting stages in the switch-on process (with voltage) and the oil spreading in the switch-off process (without voltage), are successfully simulated. By considering the factor of the change in the apparent contact angle at the contact line, the electro-optic performance obtained from the simulation is found to agree well with its corresponding experiment. The proposed model is used to parametrically predict the effect of interfacial (e.g. contact angle of grid) and geometric (e.g. oil thickness and pixel size) properties on the defects of an EWD, such as oil dewetting patterns, oil overflow, and oil non-recovery. With the help of the defect analysis, a highly stable EWD is both experimentally realized and numerically analyzed.

  7. Polymorphism, crystal nucleation and growth in the phase-field crystal model in 2D and 3D

    NASA Astrophysics Data System (ADS)

    Tóth, Gyula I.; Tegze, György; Pusztai, Tamás; Tóth, Gergely; Gránásy, László

    2010-09-01

    We apply a simple dynamical density functional theory, the phase-field crystal (PFC) model of overdamped conservative dynamics, to address polymorphism, crystal nucleation, and crystal growth in the diffusion-controlled limit. We refine the phase diagram for 3D, and determine the line free energy in 2D and the height of the nucleation barrier in 2D and 3D for homogeneous and heterogeneous nucleation by solving the respective Euler-Lagrange (EL) equations. We demonstrate that, in the PFC model, the body-centered cubic (bcc), the face-centered cubic (fcc), and the hexagonal close-packed structures (hcp) compete, while the simple cubic structure is unstable, and that phase preference can be tuned by changing the model parameters: close to the critical point the bcc structure is stable, while far from the critical point the fcc prevails, with an hcp stability domain in between. We note that with increasing distance from the critical point the equilibrium shapes vary from the sphere to specific faceted shapes: rhombic dodecahedron (bcc), truncated octahedron (fcc), and hexagonal prism (hcp). Solving the equation of motion of the PFC model supplied with conserved noise, solidification starts with the nucleation of an amorphous precursor phase, into which the stable crystalline phase nucleates. The growth rate is found to be time dependent and anisotropic; this anisotropy depends on the driving force. We show that due to the diffusion-controlled growth mechanism, which is especially relevant for crystal aggregation in colloidal systems, dendritic growth structures evolve in large-scale isothermal single-component PFC simulations. An oscillatory effective pair potential resembling those for model glass formers has been evaluated from structural data of the amorphous phase obtained by instantaneous quenching. Finally, we present results for eutectic solidification in a binary PFC model.

  8. 3D Simulation: Microgravity Environments and Applications

    NASA Technical Reports Server (NTRS)

    Hunter, Steve L.; Dischinger, Charles; Estes, Samantha; Parker, Nelson C. (Technical Monitor)

    2001-01-01

    Most, if not all, 3-D and Virtual Reality (VR) software programs are designed for one-G gravity applications. Space environments simulations require gravity effects of one one-thousandth to one one-million of that of the Earth's surface (10(exp -3) - 10(exp -6) G), thus one must be able to generate simulations that replicate those microgravity effects upon simulated astronauts. Unfortunately, the software programs utilized by the National Aeronautical and Space Administration does not have the ability to readily neutralize the one-G gravity effect. This pre-programmed situation causes the engineer or analysis difficulty during micro-gravity simulations. Therefore, microgravity simulations require special techniques or additional code in order to apply the power of 3D graphic simulation to space related applications. This paper discusses the problem and possible solutions to allow microgravity 3-D/VR simulations to be completed successfully without program code modifications.

  9. Application of Phase Field Simulations to Fuel Behavior

    SciTech Connect

    Radhakrishnan, Balasubramaniam; Gorti, Sarma B; Clarno, Kevin T

    2015-01-01

    The application of the phase filed method to simulate the formation and the stress induced re-orientation of zirconium hydride during dry storage of the spent fuel and clad assembly is discussed. The phase field technique is able to capture qualitatively the effect of external stress on the hydride orientation in Zr-H system. However, the modeling effort to-date is far from adequate and several issues remain to be addressed before the simulations can be used as a predictive tool for the behavior of the clad during long time dry storage.

  10. INCORPORATING DYNAMIC 3D SIMULATION INTO PRA

    SciTech Connect

    Steven R Prescott; Curtis Smith

    2011-07-01

    Through continued advancement in computational resources, development that was previously done by trial and error production is now performed through computer simulation. These virtual physical representations have the potential to provide accurate and valid modeling results and are being used in many different technical fields. Risk assessment now has the opportunity to use 3D simulation to improve analysis results and insights, especially for external event analysis. By using simulations, the modeler only has to determine the likelihood of an event without having to also predict the results of that event. The 3D simulation automatically determines not only the outcome of the event, but when those failures occur. How can we effectively incorporate 3D simulation into traditional PRA? Most PRA plant modeling is made up of components with different failure modes, probabilities, and rates. Typically, these components are grouped into various systems and then are modeled together (in different combinations) as a “system” with logic structures to form fault trees. Applicable fault trees are combined through scenarios, typically represented by event tree models. Though this method gives us failure results for a given model, it has limitations when it comes to time-based dependencies or dependencies that are coupled to physical processes which may themselves be space- or time-dependent. Since, failures from a 3D simulation are naturally time related, they should be used in that manner. In our simulation approach, traditional static models are converted into an equivalent state diagram representation with start states, probabilistic driven movements between states and terminal states. As the state model is run repeatedly, it converges to the same results as the PRA model in cases where time-related factors are not important. In cases where timing considerations are important (e.g., when events are dependent upon each other), then the simulation approach will typically

  11. Comparison between phase field simulations and experimental data from intragranular bubble growth in UO{sub 2}

    SciTech Connect

    Tonks, M. R.; Biner, S. B.; Mille, P. C.; Andersson, D. A.

    2013-07-01

    In this work, we used the phase field method to simulate the post-irradiation annealing of UO{sub 2} described in the experimental work by Kashibe et al., 1993 [1]. The simulations were carried out in 2D and 3D using the MARMOT FEM-based phase-field modeling framework. The 2-D results compared fairly well with the experiments, in spite of the assumptions made in the model. The 3-D results compare even more favorably to experiments, indicating that diffusion in all three directions must be considered to accurate represent the bubble growth. (authors)

  12. Simulation of 3D diamond detectors

    NASA Astrophysics Data System (ADS)

    Forcolin, G. T.; Oh, A.; Murphy, S. A.

    2017-02-01

    3D diamond detectors present an interesting prospect for future Particle Physics experiments. They have been studied in detail at beam tests with 120 GeV protons and 4 MeV protons. To understand the observations that have been made, simulations have been carried out using Synopsys TCAD in order to explain the movement of charge carriers within the sample, as well as the effects of charge sharing. Reasonable agreement has been observed between simulation and experiment.

  13. 3D MHD Simulations of Tokamak Disruptions

    NASA Astrophysics Data System (ADS)

    Woodruff, Simon; Stuber, James

    2014-10-01

    Two disruption scenarios are modeled numerically by use of the CORSICA 2D equilibrium and NIMROD 3D MHD codes. The work follows the simulations of pressure-driven modes in DIII-D and VDEs in ITER. The aim of the work is to provide starting points for simulation of tokamak disruption mitigation techniques currently in the CDR phase for ITER. Pressure-driven instability growth rates previously observed in simulations of DIIID are verified; Halo and Hiro currents produced during vertical displacements are observed in simulations of ITER with implementation of resistive walls in NIMROD. We discuss plans to exercise new code capabilities and validation.

  14. Polymorphism of iron at high pressure: A 3D phase-field model for displacive transitions with finite elastoplastic deformations

    NASA Astrophysics Data System (ADS)

    Vattré, A.; Denoual, C.

    2016-07-01

    A thermodynamically consistent framework for combining nonlinear elastoplasticity and multivariant phase-field theory is formulated at large strains. In accordance with the Clausius-Duhem inequality, the Helmholtz free energy and time-dependent constitutive relations give rise to displacive driving forces for pressure-induced martensitic phase transitions in materials. Inelastic forces are obtained by using a representation of the energy landscape that involves the concept of reaction pathways with respect to the point group symmetry operations of crystal lattices. On the other hand, additional elastic forces are derived for the most general case of large strains and rotations, as well as nonlinear, anisotropic, and different elastic pressure-dependent properties of phases. The phase-field formalism coupled with finite elastoplastic deformations is implemented into a three-dimensional Lagrangian finite element approach and is applied to analyze the iron body-centered cubic (α-Fe) into hexagonal close-packed (ɛ-Fe) phase transitions under high hydrostatic compression. The simulations exhibit the major role played by the plastic deformation in the morphological and microstructure evolution processes. Due to the strong long-range elastic interactions between variants without plasticity, a forward α → ɛ transition is energetically unfavorable and remains incomplete. However, plastic dissipation releases considerably the stored strain energy, leading to the α ↔ ɛ ↔α‧ (forward and reverse) polymorphic phase transformations with an unexpected selection of variants.

  15. Crashworthiness simulations with DYNA3D

    SciTech Connect

    Schauer, D.A.; Hoover, C.G.; Kay, G.J.; Lee, A.S.; De Groot, A.J.

    1996-04-01

    Current progress in parallel algorithm research and applications in vehicle crash simulation is described for the explicit, finite element algorithms in DYNA3D. Problem partitioning methods and parallel algorithms for contact at material interfaces are the two challenging algorithm research problems that are addressed. Two prototype parallel contact algorithms have been developed for treating the cases of local and arbitrary contact. Demonstration problems for local contact are crashworthiness simulations with 222 locally defined contact surfaces and a vehicle/barrier collision modeled with arbitrary contact. A simulation of crash tests conducted for a vehicle impacting a U-channel small sign post embedded in soil has been run on both the serial and parallel versions of DYNA3D. A significant reduction in computational time has been observed when running these problems on the parallel version. However, to achieve maximum efficiency, complex problems must be appropriately partitioned, especially when contact dominates the computation.

  16. Faster Aerodynamic Simulation With Cart3D

    NASA Technical Reports Server (NTRS)

    2003-01-01

    A NASA-developed aerodynamic simulation tool is ensuring the safety of future space operations while providing designers and engineers with an automated, highly accurate computer simulation suite. Cart3D, co-winner of NASA's 2002 Software of the Year award, is the result of over 10 years of research and software development conducted by Michael Aftosmis and Dr. John Melton of Ames Research Center and Professor Marsha Berger of the Courant Institute at New York University. Cart3D offers a revolutionary approach to computational fluid dynamics (CFD), the computer simulation of how fluids and gases flow around an object of a particular design. By fusing technological advancements in diverse fields such as mineralogy, computer graphics, computational geometry, and fluid dynamics, the software provides a new industrial geometry processing and fluid analysis capability with unsurpassed automation and efficiency.

  17. Crystal growth of pure substances: Phase-field simulations in comparison with analytical and experimental results

    NASA Astrophysics Data System (ADS)

    Nestler, B.; Danilov, D.; Galenko, P.

    2005-07-01

    A phase-field model for non-isothermal solidification in multicomponent systems [SIAM J. Appl. Math. 64 (3) (2004) 775-799] consistent with the formalism of classic irreversible thermodynamics is used for numerical simulations of crystal growth in a pure material. The relation of this approach to the phase-field model by Bragard et al. [Interface Science 10 (2-3) (2002) 121-136] is discussed. 2D and 3D simulations of dendritic structures are compared with the analytical predictions of the Brener theory [Journal of Crystal Growth 99 (1990) 165-170] and with recent experimental measurements of solidification in pure nickel [Proceedings of the TMS Annual Meeting, March 14-18, 2004, pp. 277-288; European Physical Journal B, submitted for publication]. 3D morphology transitions are obtained for variations in surface energy and kinetic anisotropies at different undercoolings. In computations, we investigate the convergence behaviour of a standard phase-field model and of its thin interface extension at different undercoolings and at different ratios between the diffuse interface thickness and the atomistic capillary length. The influence of the grid anisotropy is accurately analyzed for a finite difference method and for an adaptive finite element method in comparison.

  18. ALE-Phase-field simulations of floating particles

    NASA Astrophysics Data System (ADS)

    Yue, Pengtao

    2015-11-01

    In this talk, we will present a hybrid Arbitrary-Lagrangian-Eulerian(ALE)-Phase-Field method for the direct numerical simulation of multiphase flows where fluid interfaces, moving rigid particles, and moving contact lines coexist. Practical applications include Pickering emulsions, froth flotation, and biolocomotion at fluid interface. An ALE algorithm based on the finite element method and an adaptive moving mesh is used to track the moving boundaries of rigid particles. A phase-field method based on the same moving mesh is used to capture the fluid interfaces; meanwhile, the Cahn-Hilliard diffusion automatically takes care of the stress singularity at the moving contact line when a fluid interface intersects a solid surface. To fully resolve the diffuse interface, mesh is locally refined at the fluid interface. All the governing equations, i.e., equations for fluids, interfaces, and particles, are solved implicitly in a unified variational framework. In the end we will present some recent results on the water entry problem and the capillary interaction between floating particles (a.k.a. the Cheerios effect), with a focus on the effect of contact-line dynamics.

  19. Phase-field simulations of nuclei and early stage solidification microstructures

    NASA Astrophysics Data System (ADS)

    Nestler, B.; Selzer, M.; Danilov, D.

    2009-11-01

    To investigate the local properties of heterogeneous nuclei on substrates, a phase-field model is extended to incorporate volume constraints and a third order line tension in the gradient free energy density formulation. The new model is applied to sessile drop simulations of Cu nuclei on Ni substrates to precisely analyse 3D equilibrium shapes and diffusion processes across the phase boundaries. In particular, the formalism with higher order potentials is used to investigate the length-scale dependent effect of the line tension on Young's force balance at triple lines in 3D. The employment of parallel and adaptive simulation techniques is essential for three-dimensional numerical computations. Early stage solidification microstructures of cubic Ni crystals are simulated by scale-bridging molecular dynamics (MD) and phase-field (PF) simulations. The domain of the PF computations is initialized by transferring MD data of the atomic positions and of the shape of the nuclei. The combined approach can be used to study the responses of microstructures upon nucleation.

  20. Order parameter re-mapping algorithm for 3D phase field model of grain growth using FEM

    SciTech Connect

    Permann, Cody J.; Tonks, Michael R.; Fromm, Bradley; Gaston, Derek R.

    2016-01-14

    Phase field modeling (PFM) is a well-known technique for simulating microstructural evolution. To model grain growth using PFM, typically each grain is assigned a unique non-conserved order parameter and each order parameter field is evolved in time. Traditional approaches using a one-to-one mapping of grains to order parameters present a challenge when modeling large numbers of grains due to the computational expense of using many order parameters. This problem is exacerbated when using an implicit finite element method (FEM), as the global matrix size is proportional to the number of order parameters. While previous work has developed methods to reduce the number of required variables and thus computational complexity and run time, none of the existing approaches can be applied for an implicit FEM implementation of PFM. Here, we present a modular, dynamic, scalable reassignment algorithm suitable for use in such a system. Polycrystal modeling with grain growth and stress require careful tracking of each grain’s position and orientation which is lost when using a reduced order parameter set. In conclusion, the method presented in this paper maintains a unique ID for each grain even after reassignment, to allow the PFM to be tightly coupled to calculations of the stress throughout the polycrystal. Implementation details and comparative results of our approach are presented.

  1. Order parameter re-mapping algorithm for 3D phase field model of grain growth using FEM

    DOE PAGES

    Permann, Cody J.; Tonks, Michael R.; Fromm, Bradley; ...

    2016-01-14

    Phase field modeling (PFM) is a well-known technique for simulating microstructural evolution. To model grain growth using PFM, typically each grain is assigned a unique non-conserved order parameter and each order parameter field is evolved in time. Traditional approaches using a one-to-one mapping of grains to order parameters present a challenge when modeling large numbers of grains due to the computational expense of using many order parameters. This problem is exacerbated when using an implicit finite element method (FEM), as the global matrix size is proportional to the number of order parameters. While previous work has developed methods to reducemore » the number of required variables and thus computational complexity and run time, none of the existing approaches can be applied for an implicit FEM implementation of PFM. Here, we present a modular, dynamic, scalable reassignment algorithm suitable for use in such a system. Polycrystal modeling with grain growth and stress require careful tracking of each grain’s position and orientation which is lost when using a reduced order parameter set. In conclusion, the method presented in this paper maintains a unique ID for each grain even after reassignment, to allow the PFM to be tightly coupled to calculations of the stress throughout the polycrystal. Implementation details and comparative results of our approach are presented.« less

  2. Quasi-3D space charge simulation

    SciTech Connect

    Yang, Xi; /Fermilab

    2007-04-01

    The longitudinal space charge effect is simulated by binning the longitudinal beam profile in order to calculate the force on the bins using the binned particle distribution via FFT, and applying momentum kick based upon this space charge force to macro-particles. Usually, the longitudinal space charge kick is calculated once per turn since the longitudinal profile doesn't change much in a single turn. Besides, the longitudinal profile is used as a weighting factor for the transverse space charge force. The transverse space charge effect is simulated by projecting the 3-D beam to a 2-D Gaussian distribution in order to use the complex error function to compute the transverse space charge force, and applying this space charge force to macro-particles. One transverse space charge calculation per scale length of the beam shape variation requires at least ten transverse space charge force calculations per betatron oscillation.

  3. 3-D Simulations of Ion Rings

    NASA Astrophysics Data System (ADS)

    Omelchenko, Yu. A.; Sudan, R. N.

    1996-11-01

    The FIREX (Field-Reversed Ion Ring Experiment) program is underway at Cornell University to demonstrate an ion ring magnetic field-reversed configuration (IRC) by injecting an intense annular proton beam across a plasma-filled magnetic cusp into a neutral gas immersed in a ramped solenoidal magnetic field. The previous axisymmetric PIC simulations performed with the 21\\over 2-D FIRE code have predicted [1] that strong ion rings (with a self-magnetic field large enough to reverse the applied field on axis) can be produced using this technique. We have constructed a new, parallel, object-oriented (C++), 3-D, hybrid, PIC code, FLAME to study the 3-D aspects of the ion ring formation in strongly magnetized plasmas and stability of ion ring configurations to the toroidal perturbations. These questions are extremely important for the practical realization of the FIREX ideas and are expected to be clarified in the course of investigation of the ion beam injection and ring formation in a toroidally aberrated applied magnetic field. The nonlinear evolution of ion ring tilt and precession modes as well as code testing and performance issues will also be addressed. 1. Yu.A. Omelchenko and R.N. Sudan, Phys. Plasmas, 2773 (1995)

  4. (abstract) 3D Electromagnetic Plasma Particle Simulations

    NASA Technical Reports Server (NTRS)

    Wang, J.; Liewer, P. C.; Lyster, P.; Decyk, V. K.

    1993-01-01

    A 3D electromagnetic plasma particle-in-cell code has been developed using the General Concurrent PIC algorithm. The GCPIC algorithm uses a domain decomposition to divide the computation among the processors. Particles must be exchanged between processors as they move. The efficiencies for 1-, 2-, and 3-dimensional partitions of the three dimensional domain are compared, and the algorithm is found to be very efficient even when a large fraction (e.g., 30%) of the particles must be exchanged at every time step. This PIC code has been used to perform simulations of a variety of space plasma physics problems. Results of three applications will be discussed: 1) plasma disturbances induced by moving conducting bodies in a magnetized plasma; 2) plasma plume interactions; and 3) solar wind termination shock.

  5. Non-isothermal 3D SDPD Simulations

    NASA Astrophysics Data System (ADS)

    Yang, Jun; Potami, Raffaele; Gatsonis, Nikolaos

    2012-11-01

    The study of fluids at micro and nanoscale requires new modeling and computational approaches. Smooth Particle Dissipative Dynamics (SDPD) is a mesh-free method that provides a bridge between the continuum equations of hydrodynamics embedded in the Smooth Particle Hydrodynamics approach and the molecular nature embedded in the DPD approach. SDPD is thermodynamically consistent, does not rely on arbitrary coefficients for its thermostat, involves realistic transport coefficients, and includes fluctuation terms. SDPD is implemented in our work for arbitrary 3D geometries with a methodology to model solid wall boundary conditions. We present simulations for isothermal flows for verification of our approach. The entropy equation is implemented with a velocity-entropy Verlet integration algorithm Flows with heat transfer are simulated for verification of the SDPD. We present also the self-diffusion coefficient derived from SDPD simulations for gases and liquids. Results show the scale dependence of self-diffusion coefficient on SDPD particle size. Computational Mathematics Program of the Air Force Office of Scientific Research under grant/contract number FA9550-06-1-0236.

  6. 3D Simulations of the Beehive Proplyd

    NASA Astrophysics Data System (ADS)

    Feitosa, J. A.; Vasconcelos, M. J.; Cerqueira, A. H.

    2014-10-01

    Some star formation regions, like the Orion nebula, have stars of different masses, from massive stars, responsible for strong ionizing winds and HII regions, to low-mass stars, which spend a long time in the protostellar phase, and are frequently associated with protostellar disks and jets. Massive O or B stars emit a great deal of UV radiation, able to dissociate the hydrogen molecule (FUV radiation, energies between 6-13 eV), to ionize the atomic hydrogen (EUV radiation, energies greater than 13.6 eV) and heat the gas. Around these stars, a large and hot (10^{4}K) region is formed, known as HII region. T-Tauri stars inside HII regions produce a type of young stellar object, a proplyd, described with accuracy in O'Dell et al. (1993). Proplyds exhibit a cometary shape from which we can distinguish a central low-mass star with an accretion disk, an ionization front, a photodissociation region and, sometimes, an external bow shock and a protostellar jet. Its morphological characteristics depends on the distance between the low-mass star and the source of the ionizing radiation. The Beehive, a giant proplyd in Orion Nebula, has attracted attention due to its exotic system of rings coaxial to the HH540 jet's axis. Bally et al. (2005) suggested that the rings are perturbations due to the crossing of the ionization front by the jet. In this work, we test this hypothesis making 3D hydrodynamic numerical simulations over an adaptive grid, using the Yguazú-A code (Raga et al., 2000), properly adapted for the Beehive conditions. Our results show that the jet causes a perturbation in the ionization front of the proplyd, but is necessary to adjust carefully some parameters of the jet like its velocity and ejection frequency in order to have the results matching the observations.

  7. 3D Numerical simulations of oblique subduction

    NASA Astrophysics Data System (ADS)

    Malatesta, C.; Gerya, T.; Scambelluri, M.; Crispini, L.; Federico, L.; Capponi, G.

    2012-04-01

    In the past 2D numerical studies (e.g. Gerya et al., 2002; Gorczyk et al., 2007; Malatesta et al., 2012) provided evidence that during intraoceanic subduction a serpentinite channel forms above the downgoing plate. This channel forms as a result of hydration of the mantle wedge by uprising slab-fluids. Rocks buried at high depths are finally exhumed within this buoyant low-viscosity medium. Convergence rate in these 2D models was described by a trench-normal component of velocity. Several present and past subduction zones worldwide are however driven by oblique convergence between the plates, where trench-normal motion of the subducting slab is coupled with trench-parallel displacement of the plates. Can the exhumation mechanism and the exhumation rates of high-pressure rocks be affected by the shear component of subduction? And how uprise of these rocks can vary along the plate margin? We tried to address these questions performing 3D numerical models that simulate an intraoceanic oblique subduction. The models are based on thermo-mechanical equations that are solved with finite differences method and marker-in-cell techniques combined with multigrid approach (Gerya, 2010). In most of the models a narrow oceanic basin (500 km-wide) surrounded by continental margins is depicted. The basin is floored by either layered or heterogeneous oceanic lithosphere with gabbro as discrete bodies in serpentinized peridotite and a basaltic layer on the top. A weak zone in the mantle is prescribed to control the location of subduction initiation and therefore the plate margins geometry. Finally, addition of a third dimension in the simulations allowed us to test the role of different plate margin geometries on oblique subduction dynamics. In particular in each model we modified the dip angle of the weak zone and its "lateral" geometry (e.g. continuous, segmented). We consider "continuous" weak zones either parallel or increasingly moving away from the continental margins

  8. 3D Magnetron simulation with CST STUDIO SUITE

    SciTech Connect

    Balk, Monika C.

    2011-07-01

    The modeling of magnetrons compared to other tubes is more difficult since it requires 3D modeling rather than a 2D investigation. This is not only due to the geometry which can include complicated details to be modeled in 3D but also due to the interaction process itself. The electric field, magnetic field and particle movement span a 3D space. In this paper 3D simulations of a strapped magnetron with CSTSTUDIO SUITE{sup TM} are presented. (author)

  9. 3D visualization of port simulation.

    SciTech Connect

    Horsthemke, W. H.; Macal, C. M.; Nevins, M. R.

    1999-06-14

    Affordable and realistic three dimensional visualization technology can be applied to large scale constructive simulations such as the port simulation model, PORTSIM. These visualization tools enhance the experienced planner's ability to form mental models of how seaport operations will unfold when the simulation model is implemented and executed. They also offer unique opportunities to train new planners not only in the use of the simulation model but on the layout and design of seaports. Simulation visualization capabilities are enhanced by borrowing from work on interface design, camera control, and data presentation. Using selective fidelity, the designers of these visualization systems can reduce their time and efforts by concentrating on those features which yield the most value for their simulation. Offering the user various observational tools allows the freedom to simply watch or engage in the simulation without getting lost. Identifying the underlying infrastructure or cargo items with labels can provide useful information at the risk of some visual clutter. The PortVis visualization expands the PORTSIM user base which can benefit from the results provided by this capability, especially in strategic planning, mission rehearsal, and training. Strategic planners will immediately reap the benefits of seeing the impact of increased throughput visually without keeping track of statistical data. Mission rehearsal and training users will have an effective training tool to supplement their operational training exercises which are limited in number because of their high costs. Having another effective training modality in this visualization system allows more training to take place and more personnel to gain an understanding of seaport operations. This simulation and visualization training can be accomplished at lower cost than would be possible for the operational training exercises alone. The application of PORTSIM and PortVis will lead to more efficient

  10. 3D simulation for falling papers

    NASA Astrophysics Data System (ADS)

    Aoki, Takayuki

    2001-12-01

    The combination of IDO (Interpolated Differential Operator) scheme, Cut Cell technique, and overlapping grid method make it possible to simulate the falling process of papers. We have the result of the falling with fluttering trajectory for a certain initial angle of the paper, and the fluttering mechanism becomes clear. It is shown that the simulation is applicable to the phenomena of falling leaves with complex shape.

  11. Simulation of Damage Evolution in Composites: A Phase-field Model

    SciTech Connect

    Biner, S.B.; Hu, Shenyang Y.

    2009-04-01

    First, a phase-field model for elastic-plastic solids obeying von Mises yield criterion will be described. Then, this phase-field model will be extended to simulate the damage evolution due to nucleation and growth of voids in ductile matrix for discontinuously reinforced composites. The role of reinforcement morphology and the modulus effects leading to final failure all included in the simulations in an effort to make a parametric investigation. The advantages and disadvantages of such phase-field modeling approach in comparison to well established other continuum methods will be elucidated.

  12. Interactive 3D display simulator for autostereoscopic smart pad

    NASA Astrophysics Data System (ADS)

    Choe, Yeong-Seon; Lee, Ho-Dong; Park, Min-Chul; Son, Jung-Young; Park, Gwi-Tae

    2012-06-01

    There is growing interest of displaying 3D images on a smart pad for entertainments and information services. Designing and realizing various types of 3D displays on the smart pad is not easy for costs and given time. Software simulation can be an alternative method to save and shorten the development. In this paper, we propose a 3D display simulator for autostereoscopic smart pad. It simulates light intensity of each view and crosstalk for smart pad display panels. Designers of 3D display for smart pad can interactively simulate many kinds of autostereoscopic displays interactively by changing parameters required for panel design. Crosstalk to reduce leakage of one eye's image into the image of the other eye, and light intensity for computing visual comfort zone are important factors in designing autostereoscopic display for smart pad. Interaction enables intuitive designs. This paper describes an interactive 3D display simulator for autostereoscopic smart pad.

  13. Surviving sepsis--a 3D integrative educational simulator.

    PubMed

    Ježek, Filip; Tribula, Martin; Kulhánek, Tomáš; Mateják, Marek; Privitzer, Pavol; Šilar, Jan; Kofránek, Jiří; Lhotská, Lenka

    2015-08-01

    Computer technology offers greater educational possibilities, notably simulation and virtual reality. This paper presents a technology which serves to integrate multiple modalities, namely 3D virtual reality, node-based simulator, Physiomodel explorer and explanatory physiological simulators employing Modelica language and Unity3D platform. This emerging tool chain should allow the authors to concentrate more on educational content instead of application development. The technology is demonstrated through Surviving sepsis educational scenario, targeted on Microsoft Windows Store platform.

  14. 3D simulation for solitons used in optical fibers

    NASA Astrophysics Data System (ADS)

    Vasile, F.; Tebeica, C. M.; Schiopu, P.; Vladescu, M.

    2016-12-01

    In this paper is described 3D simulation for solitions used in optical fibers. In the scientific works is started from nonlinear propagation equation and the solitons represents its solutions. This paper presents the simulation of the fundamental soliton in 3D together with simulation of the second order soliton in 3D. These simulations help in the study of the optical fibers for long distances and in the interactions between the solitons. This study helps the understanding of the nonlinear propagation equation and for nonlinear waves. These 3D simulations are obtained using MATLAB programming language, and we can observe fundamental difference between the soliton and the second order/higher order soliton and in their evolution.

  15. Convection Effects During Bulk Transparent Alloy Solidification in DECLIC-DSI and Phase-Field Simulations in Diffusive Conditions

    NASA Astrophysics Data System (ADS)

    Mota, F. L.; Song, Y.; Pereda, J.; Billia, B.; Tourret, D.; Debierre, J.-M.; Trivedi, R.; Karma, A.; Bergeon, N.

    2017-08-01

    To study the dynamical formation and evolution of cellular and dendritic arrays under diffusive growth conditions, three-dimensional (3D) directional solidification experiments were conducted in microgravity on a model transparent alloy onboard the International Space Station using the Directional Solidification Insert in the DEvice for the study of Critical LIquids and Crystallization. Selected experiments were repeated on Earth under gravity-driven fluid flow to evidence convection effects. Both radial and axial macrosegregation resulting from convection are observed in ground experiments, and primary spacings measured on Earth and microgravity experiments are noticeably different. The microgravity experiments provide unique benchmark data for numerical simulations of spatially extended pattern formation under diffusive growth conditions. The results of 3D phase-field simulations highlight the importance of accurately modeling thermal conditions that strongly influence the front recoil of the interface and the selection of the primary spacing. The modeling predictions are in good quantitative agreements with the microgravity experiments.

  16. 3D Simulations of Irradiated One-Sided Dual-Column 3D Silicon Detector

    SciTech Connect

    Li, Z.; Gronland, T.

    2010-01-07

    We undertook, at Brookhaven National Laboratory (BNL), full 3D simulations of one-sided dual-type column 3D Si detectors (p-type substrate) after irradiation levels up to 1 x 10{sup 16} n{sub eq}/cm{sup 2}. Etching does not extend all the way through the substrate, so that all electrodes are on the front side; the backside was neither supported nor processed, covered only with a layer of silicon dioxide. Hence, BNL's one-sided dual-type column 3D detectors are true one-sided detectors. Our simulations of the electric fields at various fluences will add to our knowledge about the practicable applicability of these detectors in the high-radiation environment of future colliders. Simulations show that the full depletion voltage, V{sub fd}, for a dual-column 3D detector is about 1.4 times higher than that of a 2D (planar) pad detector with a thickness d, the same as the column spacing, L{sub p}, in the 3D detector. Moreover, the highest E-field is near the n{sup +} column, while the high E-field mainly is distributed between the n{sup +} and p{sup +} columns. The low E-field is between the two p{sup +} columns, with its lowest point in the center of the unit cell with two p{sup +} columns and two n{sup +} columns. To fully deplete a dual-column 3D detector at 1 x 10{sup 16} n{sub eq}/cm{sup 2} with a reasonable bias ({le} 200 V) necessitates reducing the column spacing, L{sub p}, to 30 {mu}m. The volume under the columns (10% of the total volume) can be depleted with a modest bias ({le}200 V); this underlying volume is not a dead volume. In addition, this depletion volume can support detection sensitivity directly under the columns, thereby lowering the effective dead volume in a 3D Si detector.

  17. Coarsening of Dendrites in Solid-Liquid Mixtures under Microgravity: Experiments and Phase Field Simulations

    NASA Astrophysics Data System (ADS)

    Cool, Thomas

    The morphological and topological evolution of dendritic structures during coarsening remains poorly understood. In particular, predicting the fissioning of secondary arms from the main dendrite stem and coalescence and retraction events remains controversial. We perform experiments on the International Space Station (ISS) since arms that fission from the stem do not sediment and thus can be detected. In addition, it is also possible to follow the morphological evolution of the structure in the absence of convection. 30% Pb-Sn samples were coarsened for different lengths of time from 10 min to 48 hrs. The morphology of the structure and the number of fissioned arms were determined using three-dimensional reconstructions. The evolution of the microstructure, the change in length scale, the number of independent bodies, the evolution of the anisotropy of the structure and the interfacial shape distributions as a function of time during coarsening were studied. Key findings are that 1) the inverse of surface area per unit volume SV -1 increases with time as t1/3 that is almost identical to a sample coarsened on earth; 2) independent bodies were found in all samples; 3) the number of independent bodies per unit volume multiplied by SV-3 is independent of coarsening time. Thus it is possible to predict the number of fragments during coarsening by a measurement of SV; 4) the genus scaled by SV{-3}$ is independent of coarsening time. A 3D reconstruction of a PbSn sample, 30% solid, that was coarsened aboard the ISS was used as an initial condition in a phase-field model to study pinching (fisioning), retraction and coalescence (fusioning) of secondary dendrite arms. The overall simulation box was 472x496x248 voxels; the phase field model was coded in OpenCL to run on a D700 FirePro GPU. In spite of the high speed of the simulations, evolving the PbSn structure from 10 min to 1.6 hrs still required 23 days. Two variants were run of the model that differ along the length of

  18. Design of 3D simulation engine for oilfield safety training

    NASA Astrophysics Data System (ADS)

    Li, Hua-Ming; Kang, Bao-Sheng

    2015-03-01

    Aiming at the demand for rapid custom development of 3D simulation system for oilfield safety training, this paper designs and implements a 3D simulation engine based on script-driven method, multi-layer structure, pre-defined entity objects and high-level tools such as scene editor, script editor, program loader. A scripting language been defined to control the system's progress, events and operating results. Training teacher can use this engine to edit 3D virtual scenes, set the properties of entity objects, define the logic script of task, and produce a 3D simulation training system without any skills of programming. Through expanding entity class, this engine can be quickly applied to other virtual training areas.

  19. An Evaluative Review of Simulated Dynamic Smart 3d Objects

    NASA Astrophysics Data System (ADS)

    Romeijn, H.; Sheth, F.; Pettit, C. J.

    2012-07-01

    Three-dimensional (3D) modelling of plants can be an asset for creating agricultural based visualisation products. The continuum of 3D plants models ranges from static to dynamic objects, also known as smart 3D objects. There is an increasing requirement for smarter simulated 3D objects that are attributed mathematically and/or from biological inputs. A systematic approach to plant simulation offers significant advantages to applications in agricultural research, particularly in simulating plant behaviour and the influences of external environmental factors. This approach of 3D plant object visualisation is primarily evident from the visualisation of plants using photographed billboarded images, to more advanced procedural models that come closer to simulating realistic virtual plants. However, few programs model physical reactions of plants to external factors and even fewer are able to grow plants based on mathematical and/or biological parameters. In this paper, we undertake an evaluation of plant-based object simulation programs currently available, with a focus upon the components and techniques involved in producing these objects. Through an analytical review process we consider the strengths and weaknesses of several program packages, the features and use of these programs and the possible opportunities in deploying these for creating smart 3D plant-based objects to support agricultural research and natural resource management. In creating smart 3D objects the model needs to be informed by both plant physiology and phenology. Expert knowledge will frame the parameters and procedures that will attribute the object and allow the simulation of dynamic virtual plants. Ultimately, biologically smart 3D virtual plants that react to changes within an environment could be an effective medium to visually represent landscapes and communicate land management scenarios and practices to planners and decision-makers.

  20. Preliminary investigations on 3D PIC simulation of DPHC structure using NEPTUNE3D code

    NASA Astrophysics Data System (ADS)

    Zhao, Hailong; Dong, Ye; Zhou, Haijing; Zou, Wenkang; Wang, Qiang

    2016-10-01

    Cubic region (34cm × 34cm × 18cm) including the double post-hole convolute (DPHC) structure was chosen to perform a series of fully 3D PIC simulations using NEPTUNE3D codes, massive data ( 200GB) could be acquired and solved in less than 5 hours. Cold-chamber tests were performed during which only cathode electron emission was considered without temperature rise or ion emission, current loss efficiency was estimated by comparisons between output magnetic field profiles with or without electron emission. PIC simulation results showed three stages of current transforming process with election emission in DPHC structure, the maximum ( 20%) current loss was 437kA at 15ns, while only 0.46% 0.48% was lost when driving current reached its peak. DPHC structure proved valuable functions during energy transform process in PTS facility, and NEPTUNE3D provided tools to explore this sophisticated physics. Project supported by the National Natural Science Foundation of China, Grant No. 11571293, 11505172.

  1. 3D Ultrasonic Wave Simulations for Structural Health Monitoring

    NASA Technical Reports Server (NTRS)

    Campbell, Leckey Cara A/; Miler, Corey A.; Hinders, Mark K.

    2011-01-01

    Structural health monitoring (SHM) for the detection of damage in aerospace materials is an important area of research at NASA. Ultrasonic guided Lamb waves are a promising SHM damage detection technique since the waves can propagate long distances. For complicated flaw geometries experimental signals can be difficult to interpret. High performance computing can now handle full 3-dimensional (3D) simulations of elastic wave propagation in materials. We have developed and implemented parallel 3D elastodynamic finite integration technique (3D EFIT) code to investigate ultrasound scattering from flaws in materials. EFIT results have been compared to experimental data and the simulations provide unique insight into details of the wave behavior. This type of insight is useful for developing optimized experimental SHM techniques. 3D EFIT can also be expanded to model wave propagation and scattering in anisotropic composite materials.

  2. M3D project for simulation studies of plasmas

    SciTech Connect

    Park, W.; Belova, E.V.; Fu, G.Y.; Strauss, H.R.; Sugiyama, L.E.

    1998-12-31

    The M3D (Multi-level 3D) project carries out simulation studies of plasmas of various regimes using multi-levels of physics, geometry, and mesh schemes in one code package. This paper and papers by Strauss, Sugiyama, and Belova in this workshop describe the project, and present examples of current applications. The currently available physics models of the M3D project are MHD, two-fluids, gyrokinetic hot particle/MHD hybrid, and gyrokinetic particle ion/two-fluid hybrid models. The code can be run with both structured and unstructured meshes.

  3. Simulating nanoparticle transport in 3D geometries with MNM3D

    NASA Astrophysics Data System (ADS)

    Bianco, Carlo; Tosco, Tiziana; Sethi, Rajandrea

    2017-04-01

    The application of NP transport to real cases, such as the design of a field-scale injection or the prediction of the long term fate of nanoparticles (NPs) in the environment, requires the support of mathematical tools to effectively assess the expected NP mobility at the field scale. In general, micro- and nanoparticle transport in porous media is controlled by particle-particle and particle-porous media interactions, which are in turn affected by flow velocity and pore water chemistry. During the injection, a strong perturbation of the flow field is induced around the well, and the NP transport is mainly controlled by the consequent sharp variation of pore-water velocity. Conversely, when the injection is stopped, the particles are transported solely due to the natural flow, and the influence of groundwater geochemistry (ionic strength, IS, in particular) on the particle behaviour becomes predominant. Pore-water velocity and IS are therefore important parameters influencing particle transport in groundwater, and have to be taken into account by the numerical codes used to simulate NP transport. Several analytical and numerical tools have been developed in recent years to model the transport of colloidal particles in simplified geometry and boundary conditions. For instance, the numerical tool MNMs was developed by the authors of this work to simulate colloidal transport in 1D Cartesian and radial coordinates. Only few simulation tools are instead available for 3D colloid transport, and none of them implements direct correlations accounting for variations of groundwater IS and flow velocity. In this work a new modelling tool, MNM3D (Micro and Nanoparticle transport Model in 3D geometries), is proposed for the simulation of injection and transport of nanoparticle suspensions in generic complex scenarios. MNM3D implements a new formulation to account for the simultaneous dependency of the attachment and detachment kinetic coefficients on groundwater IS and velocity

  4. Comparison of Actual Surgical Outcomes and 3D Surgical Simulations

    PubMed Central

    Tucker, Scott; Cevidanes, Lucia; Styner, Martin; Kim, Hyungmin; Reyes, Mauricio; Proffit, William; Turvey, Timothy

    2009-01-01

    Purpose The advent of imaging software programs have proved to be useful for diagnosis, treatment planning, and outcome measurement, but precision of 3D surgical simulation still needs to be tested. This study was conducted to determine if the virtual surgery performed on 3D models constructed from Cone-beam CT (CBCT) can correctly simulate the actual surgical outcome and to validate the ability of this emerging technology to recreate the orthognathic surgery hard tissue movements in 3 translational and 3 rotational planes of space. Methods Construction of pre- and post-surgery 3D models from CBCTs of 14 patients who had combined maxillary advancement and mandibular setback surgery and 6 patients who had one-piece maxillary advancement surgery was performed. The post-surgery and virtually simulated surgery 3D models were registered at the cranial base to quantify differences between simulated and actual surgery models. Hotelling T-test were used to assess the differences between simulated and actual surgical outcomes. Results For all anatomic regions of interest, there was no statistically significant difference between the simulated and the actual surgical models. The right lateral ramus was the only region that showed a statistically significant, but small difference when comparing two- and one-jaw surgeries. Conclusions Virtual surgical methods were reliably reproduced, oral surgery residents could benefit from virtual surgical training, and computer simulation has the potential to increase predictability in the operating room. PMID:20591553

  5. Development of a Simulation Tool for 3D Braiding Architectures

    NASA Astrophysics Data System (ADS)

    Tolosana, N.; Lomov, S.; Stüve, J.; Miravete, A.

    2007-04-01

    The usage of textile technologies for composites is widely extended in aeronautic applications. They provide an improvement on mechanical properties in the thickness direction, and offer some other advantages in comparison with prepreg technology regarding production. Nowadays 3D-braiding machines do not only enable the production of solid profiles but enable also the production of complex near-net-shape reinforcement structures with changing cross section geometry. In order to attain a full understanding on structure of 3d braids to be able to predict mechanical properties, simulation tools including machine operation are needed. A simulation tool is being developed as a part of the EU project "Integrated Tool for Simulation of Textile Composites", starting from 3d braiding machinery description and operation. This information is required to reproduce yarn paths in the produced unit cell, based on the interlacing pattern of the braid.

  6. 3d visualization of atomistic simulations on every desktop

    NASA Astrophysics Data System (ADS)

    Peled, Dan; Silverman, Amihai; Adler, Joan

    2013-08-01

    Once upon a time, after making simulations, one had to go to a visualization center with fancy SGI machines to run a GL visualization and make a movie. More recently, OpenGL and its mesa clone have let us create 3D on simple desktops (or laptops), whether or not a Z-buffer card is present. Today, 3D a la Avatar is a commodity technique, presented in cinemas and sold for home TV. However, only a few special research centers have systems large enough for entire classes to view 3D, or special immersive facilities like visualization CAVEs or walls, and not everyone finds 3D immersion easy to view. For maximum physics with minimum effort a 3D system must come to each researcher and student. So how do we create 3D visualization cheaply on every desktop for atomistic simulations? After several months of attempts to select commodity equipment for a whole room system, we selected an approach that goes back a long time, even predating GL. The old concept of anaglyphic stereo relies on two images, slightly displaced, and viewed through colored glasses, or two squares of cellophane from a regular screen/projector or poster. We have added this capability to our AViz atomistic visualization code in its new, 6.1 version, which is RedHat, CentOS and Ubuntu compatible. Examples using data from our own research and that of other groups will be given.

  7. Simulation of 3D food printing extrusion and deposition

    NASA Astrophysics Data System (ADS)

    Makino, Masato; Fukuzawa, Daisuke; Murashima, Takahiro; Furukawa, Hidemitsu

    2017-04-01

    In our 3D food printer, gel food such as gelatin is extruded from syringe and deposited to make a shape. Low viscosity is reasonable when the food is injected. On the other hand, high viscosity or solid state is desirable to keep the food shape after the food is deposited. The selection of the food viscoelastic property is difficult to succeed in the food printing. In general, we need trial and error to appropriate food viscosity. To avoid the trial and error, we are developing a simulation system of 3D food printing using Smoothed Particle Hydrodynamics (SPH) which is a kind of particle based simulation method.

  8. GPU-accelerated phase-field simulation of dendritic solidification in a binary alloy

    NASA Astrophysics Data System (ADS)

    Yamanaka, Akinori; Aoki, Takayuki; Ogawa, Satoi; Takaki, Tomohiro

    2011-03-01

    The phase-field simulation for dendritic solidification of a binary alloy has been accelerated by using a graphic processing unit (GPU). To perform the phase-field simulation of the alloy solidification on GPU, a program code was developed with computer unified device architecture (CUDA). In this paper, the implementation technique of the phase-field model on GPU is presented. Also, we evaluated the acceleration performance of the three-dimensional solidification simulation by using a single NVIDIA TESLA C1060 GPU and the developed program code. The results showed that the GPU calculation for 5763 computational grids achieved the performance of 170 GFLOPS by utilizing the shared memory as a software-managed cache. Furthermore, it can be demonstrated that the computation with the GPU is 100 times faster than that with a single CPU core. From the obtained results, we confirmed the feasibility of realizing a real-time full three-dimensional phase-field simulation of microstructure evolution on a personal desktop computer.

  9. An Object-Oriented Finite Element Framework for Multiphysics Phase Field Simulations

    SciTech Connect

    Michael R Tonks; Derek R Gaston; Paul C Millett; David Andrs; Paul Talbot

    2012-01-01

    The phase field approach is a powerful and popular method for modeling microstructure evolution. In this work, advanced numerical tools are used to create a phase field framework that facilitates rapid model development. This framework, called MARMOT, is based on Idaho National Laboratory's finite element Multiphysics Object-Oriented Simulation Environment. In MARMOT, the system of phase field partial differential equations (PDEs) are solved simultaneously with PDEs describing additional physics, such as solid mechanics and heat conduction, using the Jacobian-Free Newton Krylov Method. An object-oriented architecture is created by taking advantage of commonalities in phase fields models to facilitate development of new models with very little written code. In addition, MARMOT provides access to mesh and time step adaptivity, reducing the cost for performing simulations with large disparities in both spatial and temporal scales. In this work, phase separation simulations are used to show the numerical performance of MARMOT. Deformation-induced grain growth and void growth simulations are included to demonstrate the muliphysics capability.

  10. 3D Fiber Orientation Simulation for Plastic Injection Molding

    NASA Astrophysics Data System (ADS)

    Lin, Baojiu; Jin, Xiaoshi; Zheng, Rong; Costa, Franco S.; Fan, Zhiliang

    2004-06-01

    Glass fiber reinforced polymer is widely used in the products made using injection molding processing. The distribution of fiber orientation inside plastic parts has direct effects on quality of molded parts. Using computer simulation to predict fiber orientation distribution is one of most efficient ways to assist engineers to do warpage analysis and to find a good design solution to produce high quality plastic parts. Fiber orientation simulation software based on 2-1/2D (midplane /Dual domain mesh) techniques has been used in industry for a decade. However, the 2-1/2D technique is based on the planar Hele-Shaw approximation and it is not suitable when the geometry has complex three-dimensional features which cannot be well approximated by 2D shells. Recently, a full 3D simulation software for fiber orientation has been developed and integrated into Moldflow Plastics Insight 3D simulation software. The theory for this new 3D fiber orientation calculation module is described in this paper. Several examples are also presented to show the benefit in using 3D fiber orientation simulation.

  11. Optimized phase field models in confinement: fast and accurate simulations of directed self-assembly

    NASA Astrophysics Data System (ADS)

    Liu, Jimmy; Delaney, Kris T.; Fredrickson, Glenn H.

    2017-03-01

    To design processes that effectively use polymer directed self-assembly, we would like to have a complete picture of stable and defective polymer configurations. Field-theoretic simulations are an effective way to gain knowledge about these configurations and predict defect populations: we can easily vary design parameters such as prepattern dimensions, wetting conditions and polymer composition/architecture and observe their effects on pattern formation. We previously showed that an optimized phase field model, a modification of the Ohta-Kawasaki model, is more accurate at predicting domain spacing and defect formation in bulk systems. This accuracy is achieved by a systematic mapping procedure that optimizes parameters in the model using inexpensive, low-dimensional selfconsistent field theory (SCFT) calculations. We now make two improvements to the model. First, we implement a conjugate gradient method, a more efficient numerical solver for phase field models not available to SCFT, and characterize its performance. We find that an optimized phase field model simulation requires one to two orders of magnitude less computation time than an SCFT simulation of the same system. Second, we extend our model to confined templates and demonstrate that the new model does not suffer from the nonphysical behavior found in other phase field models in the presence of confining walls.

  12. Automatic 3D virtual scenes modeling for multisensors simulation

    NASA Astrophysics Data System (ADS)

    Latger, Jean; Le Goff, Alain; Cathala, Thierry; Larive, Mathieu

    2006-05-01

    SEDRIS that stands for Synthetic Environment Data Representation and Interchange Specification is a DoD/DMSO initiative in order to federate and make interoperable 3D mocks up in the frame of virtual reality and simulation. This paper shows an original application of SEDRIS concept for research physical multi sensors simulation, when SEDRIS is more classically known for training simulation. CHORALE (simulated Optronic Acoustic Radar battlefield) is used by the French DGA/DCE (Directorate for Test and Evaluation of the French Ministry of Defense) to perform multi-sensors simulations. CHORALE enables the user to create virtual and realistic multi spectral 3D scenes, and generate the physical signal received by a sensor, typically an IR sensor. In the scope of this CHORALE workshop, French DGA has decided to introduce a SEDRIS based new 3D terrain modeling tool that enables to create automatically 3D databases, directly usable by the physical sensor simulation CHORALE renderers. This AGETIM tool turns geographical source data (including GIS facilities) into meshed geometry enhanced with the sensor physical extensions, fitted to the ray tracing rendering of CHORALE, both for the infrared, electromagnetic and acoustic spectrum. The basic idea is to enhance directly the 2D source level with the physical data, rather than enhancing the 3D meshed level, which is more efficient (rapid database generation) and more reliable (can be generated many times, changing some parameters only). The paper concludes with the last current evolution of AGETIM in the scope mission rehearsal for urban war using sensors. This evolution includes indoor modeling for automatic generation of inner parts of buildings.

  13. Parallelization of Program to Optimize Simulated Trajectories (POST3D)

    NASA Technical Reports Server (NTRS)

    Hammond, Dana P.; Korte, John J. (Technical Monitor)

    2001-01-01

    This paper describes the parallelization of the Program to Optimize Simulated Trajectories (POST3D). POST3D uses a gradient-based optimization algorithm that reaches an optimum design point by moving from one design point to the next. The gradient calculations required to complete the optimization process, dominate the computational time and have been parallelized using a Single Program Multiple Data (SPMD) on a distributed memory NUMA (non-uniform memory access) architecture. The Origin2000 was used for the tests presented.

  14. VISRAD, 3-D Target Design and Radiation Simulation Code

    NASA Astrophysics Data System (ADS)

    Golovkin, Igor; Macfarlane, Joseph; Golovkina, Viktoriya

    2016-10-01

    The 3-D view factor code VISRAD is widely used in designing HEDP experiments at major laser and pulsed-power facilities, including NIF, OMEGA, OMEGA-EP, ORION, LMJ, Z, and PLX. It simulates target designs by generating a 3-D grid of surface elements, utilizing a variety of 3-D primitives and surface removal algorithms, and can be used to compute the radiation flux throughout the surface element grid by computing element-to-element view factors and solving power balance equations. Target set-up and beam pointing are facilitated by allowing users to specify positions and angular orientations using a variety of coordinates systems (e.g., that of any laser beam, target component, or diagnostic port). Analytic modeling for laser beam spatial profiles for OMEGA DPPs and NIF CPPs is used to compute laser intensity profiles throughout the grid of surface elements. We will discuss recent improvements to the software package and plans for future developments.

  15. 3-D General Relativistic MHD Simulations of Generating Jets

    NASA Astrophysics Data System (ADS)

    Nishikawa, K.-I.; Koide, S.; Shibata, K.; Kudoh, T.; Frank, J.; Sol, H.

    1999-05-01

    Koide et al have investigated the dynamics of an accretion disk initially threaded by a uniform poloidal magnetic field in a non-rotating corona (either in a steady-state infalling state or in hydrostatic equilibrium) around a non-rotating black hole using a 3-D GRMHD with the ``axisymmetry'' along the z-direction. Magnetic field is tightly twisted by the rotation of the disk, and plasmas in the shocked region of the disk are accelerated by J x B force to form bipolar relativistic jets. In order to investigate variabilities of generated relativistic jets and magnetic field structure inside jets, we have performed calculations using the 3-D GRMHD code on a full 3-dimensional system. We will investigate how the third dimension affects the global disk dynamics. 3-D RMHD simulations wil be also performed to investigate the dynamics of a jet with a helical mangetic field in it.

  16. 3D finite element simulations of high velocity projectile impact

    NASA Astrophysics Data System (ADS)

    Ožbolt, Joško; İrhan, Barış; Ruta, Daniela

    2015-09-01

    An explicit three-dimensional (3D) finite element (FE) code is developed for the simulation of high velocity impact and fragmentation events. The rate sensitive microplane material model, which accounts for large deformations and rate effects, is used as a constitutive law. In the code large deformation frictional contact is treated by forward incremental Lagrange multiplier method. To handle highly distorted and damaged elements the approach based on the element deletion is employed. The code is then used in 3D FE simulations of high velocity projectile impact. The results of the numerical simulations are evaluated and compared with experimental results. It is shown that it realistically predicts failure mode and exit velocities for different geometries of plain concrete slab. Moreover, the importance of some relevant parameters, such as contact friction, rate sensitivity, bulk viscosity and deletion criteria are addressed.

  17. GPU phase-field lattice Boltzmann simulations of growth and motion of a binary alloy dendrite

    NASA Astrophysics Data System (ADS)

    Takaki, T.; Rojas, R.; Ohno, M.; Shimokawabe, T.; Aoki, T.

    2015-06-01

    A GPU code has been developed for a phase-field lattice Boltzmann (PFLB) method, which can simulate the dendritic growth with motion of solids in a dilute binary alloy melt. The GPU accelerated PFLB method has been implemented using CUDA C. The equiaxed dendritic growth in a shear flow and settling condition have been simulated by the developed GPU code. It has been confirmed that the PFLB simulations were efficiently accelerated by introducing the GPU computation. The characteristic dendrite morphologies which depend on the melt flow and the motion of the dendrite could also be confirmed by the simulations.

  18. 3D simulation of coaxial carbon nanotube field effect transistor

    NASA Astrophysics Data System (ADS)

    Hien, Dinh Sy; Thi Luong, Nguyen; Tuan, Thi Tran Anh; Viet Nga, Dinh

    2009-09-01

    We provide a model of coaxial CNTFET geometry. Coaxial devices are of special interest because their geometry allows for better electrostatics. We explore the possibilities of using non-equilibrium Green's function method to get I-V characteristics for CNTFETs. This simulator also includes a graphic user interface (GUI) of Matlab. We review the capabilities of the simulator, and give examples of typical CNTFET's 3D simulations (current-voltage characteristics are a function of parameters such as the length of CNTFET, gate thickness and temperature). The obtained I-V characteristics of the CNTFET are also presented by analytical equations.

  19. Phase-Field Simulations at the Atomic Scale in Comparison to Molecular Dynamics

    PubMed Central

    Selzer, Michael; Nestler, Britta

    2013-01-01

    Early solidification is investigated using two different simulation techniques: the molecular dynamics (MD) and the phase-field (PF) methods. While the first describes the evolution of a system on the basis of motion equations of particles, the second grounds on the evolution of continuous local order parameter field. The aim of this study is to probe the ability of the mesoscopic phase-field method to make predictions of growth velocity at the nanoscopic length scale. For this purpose the isothermal growth of a spherical crystalline cluster embedded in a melt is considered. The system in study is Ni modeled with the embedded atom method (EAM). The bulk and interfacial properties required in the PF method are obtained from MD simulations. Also the initial configuration obtained from MD data is used in the PF as input. Results for the evolution of the cluster volume at high and moderate undercooling are presented. PMID:24453874

  20. Comparative visual analysis of 3D urban wind simulations

    NASA Astrophysics Data System (ADS)

    Röber, Niklas; Salim, Mohamed; Grawe, David; Leitl, Bernd; Böttinger, Michael; Schlünzen, Heinke

    2016-04-01

    Climate simulations are conducted in large quantity for a variety of different applications. Many of these simulations focus on global developments and study the Earth's climate system using a coupled atmosphere ocean model. Other simulations are performed on much smaller regional scales, to study very small fine grained climatic effects. These microscale climate simulations pose similar, yet also different, challenges for the visualization and the analysis of the simulation data. Modern interactive visualization and data analysis techniques are very powerful tools to assist the researcher in answering and communicating complex research questions. This presentation discusses comparative visualization for several different wind simulations, which were created using the microscale climate model MITRAS. The simulations differ in wind direction and speed, but are all centered on the same simulation domain: An area of Hamburg-Wilhelmsburg that hosted the IGA/IBA exhibition in 2013. The experiments contain a scenario case to analyze the effects of single buildings, as well as examine the impact of the Coriolis force within the simulation. The scenario case is additionally compared with real measurements from a wind tunnel experiment to ascertain the accuracy of the simulation and the model itself. We also compare different approaches for tree modeling and evaluate the stability of the model. In this presentation, we describe not only our workflow to efficiently and effectively visualize microscale climate simulation data using common 3D visualization and data analysis techniques, but also discuss how to compare variations of a simulation and how to highlight the subtle differences in between them. For the visualizations we use a range of different 3D tools that feature techniques for statistical data analysis, data selection, as well as linking and brushing.

  1. 3-D Particle Simulation of Current Sheet Instabilities

    NASA Astrophysics Data System (ADS)

    Wang, Zhenyu; Lin, Yu; Wang, Xueyi; Tummel, Kurt; Chen, Liu

    2015-11-01

    The electrostatic (ES) and electromagnetic (EM) instabilities of a Harris current sheet are investigated using a 3-D linearized (δf) gyrokinetic (GK) electron and fully kinetic (FK) ion (GeFi) particle simulation code. The equilibrium magnetic field consists of an asymptotic anti-parallel Bx 0 and a guide field BG. The ES simulations show the excitation of lower-hybrid drift instability (LHDI) at the current sheet edge. The growth rate of the 3-D LHDI is scanned through the (kx ,ky) space. The most unstable modes are found to be at k∥ = 0 for smaller ky. As ky increases, the growth rate shows two peaks at k∥ ≠ 0 , consistent with analytical GK theory. The eigenmode structure and growth rate of LHDI obtained from the GeFi simulation agree well with those obtained from the FK PIC simulation. Decreasing BG, the asymptotic βe 0, or background density can destabilize the LHDI. In the EM simulation, tearing mode instability is dominant in the cases with ky kx , there exist two unstable modes: a kink-like (LHDI) mode at the current sheet edge and a sausage-like mode at the sheet center. The results are compared with the GK eigenmode theory and the FK simulation.

  2. Implementation of virtual models from sheet metal forming simulation into physical 3D colour models using 3D printing

    NASA Astrophysics Data System (ADS)

    Junk, S.

    2016-08-01

    Today the methods of numerical simulation of sheet metal forming offer a great diversity of possibilities for optimization in product development and in process design. However, the results from simulation are only available as virtual models. Because there are any forming tools available during the early stages of product development, physical models that could serve to represent the virtual results are therefore lacking. Physical 3D-models can be created using 3D-printing and serve as an illustration and present a better understanding of the simulation results. In this way, the results from the simulation can be made more “comprehensible” within a development team. This paper presents the possibilities of 3D-colour printing with particular consideration of the requirements regarding the implementation of sheet metal forming simulation. Using concrete examples of sheet metal forming, the manufacturing of 3D colour models will be expounded upon on the basis of simulation results.

  3. Simulation of human ischemic stroke in realistic 3D geometry

    NASA Astrophysics Data System (ADS)

    Dumont, Thierry; Duarte, Max; Descombes, Stéphane; Dronne, Marie-Aimée; Massot, Marc; Louvet, Violaine

    2013-06-01

    In silico research in medicine is thought to reduce the need for expensive clinical trials under the condition of reliable mathematical models and accurate and efficient numerical methods. In the present work, we tackle the numerical simulation of reaction-diffusion equations modeling human ischemic stroke. This problem induces peculiar difficulties like potentially large stiffness which stems from the broad spectrum of temporal scales in the nonlinear chemical source term as well as from the presence of steep spatial gradients in the reaction fronts, spatially very localized. Furthermore, simulations on realistic 3D geometries are mandatory in order to describe correctly this type of phenomenon. The main goal of this article is to obtain, for the first time, 3D simulations on realistic geometries and to show that the simulation results are consistent with those obtain in experimental studies or observed on MRI images in stroke patients. For this purpose, we introduce a new resolution strategy based mainly on time operator splitting that takes into account complex geometry coupled with a well-conceived parallelization strategy for shared memory architectures. We consider then a high order implicit time integration for the reaction and an explicit one for the diffusion term in order to build a time operator splitting scheme that exploits efficiently the special features of each problem. Thus, we aim at solving complete and realistic models including all time and space scales with conventional computing resources, that is on a reasonably powerful workstation. Consequently and as expected, 2D and also fully 3D numerical simulations of ischemic strokes for a realistic brain geometry, are conducted for the first time and shown to reproduce the dynamics observed on MRI images in stroke patients. Beyond this major step, in order to improve accuracy and computational efficiency of the simulations, we indicate how the present numerical strategy can be coupled with spatial

  4. Coniferous canopy BRF simulation based on 3-D realistic scene.

    PubMed

    Wang, Xin-Yun; Guo, Zhi-Feng; Qin, Wen-Han; Sun, Guo-Qing

    2011-09-01

    It is difficulties for the computer simulation method to study radiation regime at large-scale. Simplified coniferous model was investigated in the present study. It makes the computer simulation methods such as L-systems and radiosity-graphics combined method (RGM) more powerful in remote sensing of heterogeneous coniferous forests over a large-scale region. L-systems is applied to render 3-D coniferous forest scenarios, and RGM model was used to calculate BRF (bidirectional reflectance factor) in visible and near-infrared regions. Results in this study show that in most cases both agreed well. Meanwhile at a tree and forest level, the results are also good.

  5. 3D simulation of the Cluster-Cluster Aggregation model

    NASA Astrophysics Data System (ADS)

    Li, Chao; Xiong, Hailing

    2014-12-01

    We write a program to implement the Cluster-Cluster Aggregation (CCA) model with java programming language. By using the simulation program, the fractal aggregation growth process can be displayed dynamically in the form of a three-dimensional (3D) figure. Meanwhile, the related kinetics data of aggregation simulation can be also recorded dynamically. Compared to the traditional programs, the program has better real-time performance and is more helpful to observe the fractal growth process, which contributes to the scientific study in fractal aggregation. Besides, because of adopting java programming language, the program has very good cross-platform performance.

  6. 3D Numerical Simulations of the Breakout Model

    NASA Astrophysics Data System (ADS)

    Choe, G. S.; Cheng, C. Z.; Lee, J.; Lynch, B. J.; Antiochos, S. K.; DeVore, C. R.; Zurbuchen, T. H.

    2005-05-01

    We present the continuing progress of the numerical simulations of the breakout model for coronal mass ejection initiation. To validate the 3D spherical ARMS code we have run the 2.5D breakout problem and compare the eruption to the published 2D results. The ARMS 2.5D CME also forms a large magnetic island ahead of the erupting plasmoid due to the code's excellent maintenance of equatorial symmetry. Progress on the fully 3D breakout problem is also discussed. To build up enough magnetic free energy for an eruption the active region field must be strong with a steep gradient near the polarity inversion line and the shear must be highly concentrated there. This requires adaptive griding techniques. In the current simulation, the active region to background field ratio is 20-to-1 and the neutral line is long compared to the active region width. We present the evolution of this topology under Br-conserving shearing flow and discuss implications for a 3D eruption. This work is supported by NASA and ONR. BJL is supported by NASA GSRP grant NGT5-50453.

  7. USM3D Simulations for Second Sonic Boom Workshop

    NASA Technical Reports Server (NTRS)

    Elmiligui, Alaa; Carter, Melissa B.; Nayani, Sudheer N.; Cliff, Susan; Pearl, Jason M.

    2017-01-01

    The NASA Tetrahedral Unstructured Software System with the USM3D flow solver was used to compute test cases for the Second AIAA Sonic Boom Prediction Workshop. The intent of this report is to document the USM3D results for SBPW2 test cases. The test cases included an axisymmetric equivalent area body, a JAXA wing body, a NASA low boom supersonic configuration modeled with flow through nacelles and engine boundary conditions. All simulations were conducted for a free stream Mach number of 1.6, zero degrees angle of attack, and a Reynolds number of 5.7 million per meter. Simulations were conducted on tetrahedral grids provided by the workshop committee, as well as a family of grids generated by an in-house approach for sonic boom analyses known as BoomGrid using current best practices. The near-field pressure signatures were extracted and propagated to the ground with the atmospheric propagation code, sBOOM. The USM3D near-field pressure signatures, corresponding sBOOM ground signatures, and loudness levels on the ground are compared with mean values from other workshop participants.

  8. 3D EFT imaging with planar electrode array: Numerical simulation

    NASA Astrophysics Data System (ADS)

    Tuykin, T.; Korjenevsky, A.

    2010-04-01

    Electric field tomography (EFT) is the new modality of the quasistatic electromagnetic sounding of conductive media recently investigated theoretically and realized experimentally. The demonstrated results pertain to 2D imaging with circular or linear arrays of electrodes (and the linear array provides quite poor quality of imaging). In many applications 3D imaging is essential or can increase value of the investigation significantly. In this report we present the first results of numerical simulation of the EFT imaging system with planar array of electrodes which allows 3D visualization of the subsurface conductivity distribution. The geometry of the system is similar to the geometry of our EIT breast imaging system providing 3D conductivity imaging in form of cross-sections set with different depth from the surface. The EFT principle of operation and reconstruction approach differs from the EIT system significantly. So the results of numerical simulation are important to estimate if comparable quality of imaging is possible with the new contactless method. The EFT forward problem is solved using finite difference time domain (FDTD) method for the 8×8 square electrodes array. The calculated results of measurements are used then to reconstruct conductivity distributions by the filtered backprojections along electric field lines. The reconstructed images of the simple test objects are presented.

  9. Phase-Field Models for Simulating Physical Vapor Deposition and Microstructure Evolution of Thin Films

    NASA Astrophysics Data System (ADS)

    Stewart, James A., Jr.

    The focus of this research is to develop, implement, and utilize phase-field models to study microstructure evolution in thin films during physical vapor deposition (PVD). There are four main goals to this dissertation. First, a phase-field model is developed to simulate PVD of a single-phase polycrystalline material by coupling previous modeling efforts on deposition of single-phase materials and grain evolution in polycrystalline materials. Second, a phase-field model is developed to simulate PVD of a polymorphic material by coupling previous modeling efforts on PVD of a single-phase material, evolution in multiphase materials, and phase nucleation. Third, a novel free energy functional is proposed that incorporates appropriate energetics and dynamics for simultaneous modeling of PVD and grain evolution in single-phase polycrystalline materials. Finally, these phase-field models are implemented into custom simulation codes and utilized to illustrate these models' capabilities in capturing PVD thin film growth, grain and grain boundary (GB) evolution, phase evolution and nucleation, and temperature evolution. In general, these simulations show: grain coarsening through grain rotation and GB migration such that grains tend to align with the thin film surface features and GBs migrate to locations between these features so that each surface feature has a distinct grain and orientation; the incident vapor flux rate controls the density of the thin film and the formation of surface and subsurface features; the substrate phase distribution initially acts as a template for the growing microstructure until the thin film becomes sufficiently thick; latent heat released during PVD increases the surface temperature of the thin film creating a temperature gradient within the thin film influencing phase evolution and nucleation; and temperature distributions lead to regions within the thin film that allow for multiple phases to be stable and coexist. Further, this work shows

  10. Virtual environment display for a 3D audio room simulation

    NASA Technical Reports Server (NTRS)

    Chapin, William L.; Foster, Scott H.

    1992-01-01

    The development of a virtual environment simulation system integrating a 3D acoustic audio model with an immersive 3D visual scene is discussed. The system complements the acoustic model and is specified to: allow the listener to freely move about the space, a room of manipulable size, shape, and audio character, while interactively relocating the sound sources; reinforce the listener's feeling of telepresence in the acoustical environment with visual and proprioceptive sensations; enhance the audio with the graphic and interactive components, rather than overwhelm or reduce it; and serve as a research testbed and technology transfer demonstration. The hardware/software design of two demonstration systems, one installed and one portable, are discussed through the development of four iterative configurations.

  11. Virtual environment display for a 3D audio room simulation

    NASA Technical Reports Server (NTRS)

    Chapin, William L.; Foster, Scott H.

    1992-01-01

    The development of a virtual environment simulation system integrating a 3D acoustic audio model with an immersive 3D visual scene is discussed. The system complements the acoustic model and is specified to: allow the listener to freely move about the space, a room of manipulable size, shape, and audio character, while interactively relocating the sound sources; reinforce the listener's feeling of telepresence in the acoustical environment with visual and proprioceptive sensations; enhance the audio with the graphic and interactive components, rather than overwhelm or reduce it; and serve as a research testbed and technology transfer demonstration. The hardware/software design of two demonstration systems, one installed and one portable, are discussed through the development of four iterative configurations.

  12. 3-D General Relativistic MHD Simulations of Generating Jets

    NASA Astrophysics Data System (ADS)

    Nishikawa, K.-I.; Koide, S.; Shibata, K.; Kudoh, T.; Sol, H.; Hughes, J. P.

    2001-12-01

    We have investigated the dynamics of an accretion disk around Schwarzschild black holes initially threaded by a uniform poloidal magnetic field in a non-rotating corona (either in a steady-state infalling state) around a non-rotating black hole using a 3-D GRMHD with the ``axisymmetry'' along the z-direction. Magnetic field is tightly twisted by the rotation of the disk, and plasmas in the shocked region of the disk are accelerated by J x B force to form bipolar relativistic jets. In order to investigate variabilities of generated relativistic jets and magnetic field structure inside jets, we have performed calculations using the 3-D GRMHD code with a full 3-dimensional system without the axisymmetry. We have investigated how the third dimension affects the global disk dynamics and jet generation. We will perform simulations with various incoming flows from an accompanying star.

  13. Jet Formation with 3-D General Relativistic MHD Simulations

    NASA Astrophysics Data System (ADS)

    Richardson, G. A.; Nishikawa, K.-I.; Preece, R.; Hardee, P.; Koide, S.; Shibata, K.; Kudoh, T.; Sol, H.; Hughes, J. P.; Fishman, J.

    2002-12-01

    We have investigated the dynamics of an accretion disk around Schwarzschild black holes initially threaded by a uniform poloidal magnetic field in a non-rotating corona (in a steady-state infalling state) around a non-rotating black hole using 3-D GRMHD with the ``axisymmetry'' along the z-direction. The magnetic field is tightly twisted by the rotation of the accretion disk, and plasmas in the shocked region of the disk are accelerated by the J x B force to form bipolar relativistic jets. In order to investigate variabilities of generated relativistic jets and the magnetic field structure inside jets, we have performed calculations using the 3-D GRMHD code with a full 3-dimensional system without the axisymmetry. We have investigated how the third dimension affects the global disk dynamics and jet generation. We will perform simulations with various incoming flows from an accompanying star.

  14. 3-D General Relativistic MHD Simulations of Generating Jets

    NASA Astrophysics Data System (ADS)

    Nishikawa, Ken-Ichi; Koide, Shinji; Shibata, Kazunari; Kudoh, Takashiro; Sol, Helene; Hughes, John

    2002-04-01

    We have investigated the dynamics of an accretion disk around Schwarzschild black holes initially threaded by a uniform poloidal magnetic field in a non-rotating corona (either in a steady-state infalling state) around a non-rotating black hole using a 3-D GRMHD with the ``axisymmetry'' along the z-direction. Magnetic field is tightly twisted by the rotation of the disk, and plasmas in the shocked region of the disk are accelerated by J × B force to form bipolar relativistic jets. In order to investigate variabilities of generated relativistic jets and magnetic field structure inside jets, we have performed calculations using the 3-D GRMHD code with a full 3-dimensional system without the axisymmetry. We have investigated how the third dimension affects the global disk dynamics and jet generation. We will perform simulations with various incoming flows from an accompanying star.

  15. Computational issues connected with 3D N-body simulations

    NASA Astrophysics Data System (ADS)

    Pfenniger, D.; Friedli, D.

    1993-03-01

    Computational problems related to modeling gravitational systems, and running and analyzing 3D N-body models are discussed. N-body simulations using Particle-Mesh techniques with polar grids are especially well-suited, and physically justified, when studying quiet evolutionary processes in disk galaxies. This technique allows large N, high central resolution, and is still the fastest one. Regardless of the method chosen to compute gravitation, softening is a compromise between HF amplification and resolution. Softened spherical and ellipsoidal kernels with variable resolution are set up. Detailed characteristics of the 3D polar grid, tests, code performances, and vectorization rates are also given. For integrating motion in rotating coordinates, a stable symplectic extension of the leap-frog algorithm is described. The technique used to search for periodic orbits in arbitrary N-body potentials and to determine their stability is explained.

  16. 3D-CANVENT: An interactive mine ventilation simulator

    SciTech Connect

    Hardcastle, S.G.

    1995-12-31

    3D-CANVENT is a software package that integrates advanced computer aided design (ACAD) true 3D graphics with a mine ventilation simulator. The package runs as a Windows{trademark} application to access its printer drivers environment and does not need third party CAD software. It is composed of two primary modules: DMVENT and MINEDESIGNER. DMVENT is a traditional Fortran coded Hardy-Cross iterative ventilation network solver written in 1980 with thermodynamic capabilities. This module is relatively unchanged with the traditional data input options for branch type, specified or calculated resistances, fixed flows, and fixed or variable pressure fans. MINEDESIGNER is the graphics engine that optimizes the ventilation design process. It performs the front-end transformation of input data entered in the graphical interface into the correct format for the solver. At the back-end it reconverts the historically standard tabular data output from the solver into an easily viewed graphical format. ACAD features of MINEDESIGNER are used to generate a 3D wire-frame node and branch network of the mine`s ventilation system. The network can be displayed in up to 4 views orientated to XYZ planes or a 3D view. AU the views have zoom, pan, slice and rotate options. The graphical interface efficiently permits data entry and editing via a mouse with pick-and-point item selection. Branches can be found or added with {open_quotes}search{close_quotes} and {open_quotes}join{close_quotes} options. Visual interpretation is enhanced by the 16 colour options for branches and numerous graphical attributes. Network locations are readily identified by alpha-numeric names for branches, junctions and fans, and also the logical numbering of junctions. The program is also readily expandable for pollutant simulation and control/monitoring applications.

  17. Using Delft3D to Simulate Current Energy Conversion

    NASA Astrophysics Data System (ADS)

    James, S. C.; Chartrand, C.; Roberts, J.

    2015-12-01

    As public concern with renewable energy increases, current energy conversion (CEC) technology is being developed to optimize energy output and minimize environmental impact. CEC turbines generate energy from tidal and current systems and create wakes that interact with turbines located downstream of a device. The placement of devices can greatly influence power generation and structural reliability. CECs can also alter the ecosystem process surrounding the turbines, such as flow regimes, sediment dynamics, and water quality. Software is needed to investigate specific CEC sites to simulate power generation and hydrodynamic responses of a flow through a CEC turbine array. This work validates Delft3D against several flume experiments by simulating the power generation and hydrodynamic response of flow through a turbine or actuator disc(s). Model parameters are then calibrated against these data sets to reproduce momentum removal and wake recovery data with 3-D flow simulations. Simulated wake profiles and turbulence intensities compare favorably to the experimental data and demonstrate the utility and accuracy of a fast-running tool for future siting and analysis of CEC arrays in complex domains.

  18. 3-D Imaging and Simulation for Nephron Sparing Surgical Training.

    PubMed

    Ahmadi, Hamed; Liu, Jen-Jane

    2016-08-01

    Minimally invasive partial nephrectomy (MIPN) is now considered the procedure of choice for small renal masses largely based on functional advantages over traditional open surgery. Lack of haptic feedback, the need for spatial understanding of tumor borders, and advanced operative techniques to minimize ischemia time or achieve zero-ischemia PN are among factors that make MIPN a technically demanding operation with a steep learning curve for inexperienced surgeons. Surgical simulation has emerged as a useful training adjunct in residency programs to facilitate the acquisition of these complex operative skills in the setting of restricted work hours and limited operating room time and autonomy. However, the majority of available surgical simulators focus on basic surgical skills, and procedure-specific simulation is needed for optimal surgical training. Advances in 3-dimensional (3-D) imaging have also enhanced the surgeon's ability to localize tumors intraoperatively. This article focuses on recent procedure-specific simulation models for laparoscopic and robotic-assisted PN and advanced 3-D imaging techniques as part of pre- and some cases, intraoperative surgical planning.

  19. Statistical 3D 'Atomistic' Simulation of Decanano MOSFETs

    NASA Technical Reports Server (NTRS)

    Asenov, Asen; Slavcheva, G.; Brown, A. R.; Balasubramaniam, R.; Davies, J. H.

    2000-01-01

    A 3D statistical 'atomistic' simulation technique has been developed to study the effect of the random dopant induced parameter fluctuations in aggressively scaled MOSFETs. Efficient implementation of the 'atomistic' simulation approach has been used to investigate the threshold voltage standard deviation and lowering in the case of uniformly doped MOSFETs, and in fluctuation-resistant architectures utilising epitaxial-layers and delta-doping. The effect of the random doping in the polysilicon gate on the threshold voltage fluctuations has also been thoroughly investigated. The influence of a single-charge trapping on the channel conductivity in decanano MOSFETs is studied in the 'atomistic' framework as well. Quantum effects are taken into consideration in our 'atomistic' simulations using the density gradient formalism.

  20. Computer simulations of ferroelectric domain structure and switching using phase-field approach

    NASA Astrophysics Data System (ADS)

    Choudhury, Samrat

    Ferroelectrics are important functional materials with wide applications in various microelectronic and electrooptical devices such as memories, sensors, and actuators. For the application to information storage devices, the switchability of domains in a ferroelectric by an applied electric field is utilized. The conventional thermodynamic approach to describe switching behavior typically assumes a material to be a perfect crystal while a real ferroelectric material is generally inhomogeneous and contains domains and domain walls, as well as defects such as surfaces, grain boundaries, dislocations and dipolar defects. As a result, prior thermodynamic calculations predicted coercive fields, the minimum applied field to switch a domain, are at least one or more orders of magnitude too high compared to those measured experimentally. In this work, I developed a three-dimensional (3-D) phase-field model for predicting the domain structures and ferroelectric properties in the presence of structural inhomogeneities in both bulk crystals and thin films. The model takes into account realistic polycrystalline grain structures as well as various energetic contributions including elastic energy, electrostatic energy, and domain wall energy. It is shown that the defects such as existing domain walls, and grain boundaries play a critical role in domain switching and in determining the magnitude of coercive field. It will be demonstrated that the phase-field approach is able to predict the coercive fields and remanent polarizations that are in excellent agreement with experimental measurements. The effect of substrate constraint on phase stability and ferroelectric properties is also discussed. Further, the phase-field model developed has been extended to study the local tip-induced polarization switching in the presence of twin defects. Epitaxial lead zirconate titanate (PbZr(1-x)TixO3) thin film were studied as a model system. It was observed that the electric potential

  1. Development of a 3D particle treecode for plasma simulations

    NASA Astrophysics Data System (ADS)

    Ong, Benjamin; Christlieb, Andrew; Krasny, Robert

    2008-11-01

    In this work we present a fully 3-D Boundary Integral Treecode (BIT). We apply the method to several classic problems such as sheath formation and 3D simulations of a Penning trap. In addition, we investigate the ability of the solver to naturally capture Coloumb scattering. A key point in the investigation is to understand the effect of different types of regularizations, and how to appropriately incorporate the regularization in the BIT framework. This work builds on substantial efforts in 1- and 2-D. [1] R. Krasny and K. Lindsay, A particle method and adaptive treecode for vortex sheet motion in 3-D flow, JCP, Vol. 172, No. 2, 879-907 [2] K. Matyash, R. Schneider, R. Sydora, and F. Taccogna, Application of a Grid-Free Kinetic Model to the Collisionless Sheath, Contrib. Plasma Phys, Vol. 48, No. 1-3, 116-120 (2008) [3] K. Cartwright and A. Christlieb, Boundary Integral Corrected Particle in Cell, SIAM Journal on Sci. Comput., submitted [4] A. Christlieb, R. Krasny, B. Ong and J. Qiu, A Step Towards Addressing Temporal Multi-scale Problems in Plasma Physics, in prep.

  2. 3D hydrodynamic simulations of carbon burning in massive stars

    NASA Astrophysics Data System (ADS)

    Cristini, A.; Meakin, C.; Hirschi, R.; Arnett, D.; Georgy, C.; Viallet, M.; Walkington, I.

    2017-10-01

    We present the first detailed 3D hydrodynamic implicit large eddy simulations of turbulent convection of carbon burning in massive stars. Simulations begin with radial profiles mapped from a carbon-burning shell within a 15 M⊙ 1D stellar evolution model. We consider models with 1283, 2563, 5123, and 10243 zones. The turbulent flow properties of these carbon-burning simulations are very similar to the oxygen-burning case. We performed a mean field analysis of the kinetic energy budgets within the Reynolds-averaged Navier-Stokes framework. For the upper convective boundary region, we find that the numerical dissipation is insensitive to resolution for linear mesh resolutions above 512 grid points. For the stiffer, more stratified lower boundary, our highest resolution model still shows signs of decreasing sub-grid dissipation suggesting it is not yet numerically converged. We find that the widths of the upper and lower boundaries are roughly 30 per cent and 10 per cent of the local pressure scaleheights, respectively. The shape of the boundaries is significantly different from those used in stellar evolution models. As in past oxygen-shell-burning simulations, we observe entrainment at both boundaries in our carbon-shell-burning simulations. In the large Péclet number regime found in the advanced phases, the entrainment rate is roughly inversely proportional to the bulk Richardson number, RiB (∝RiB-α, 0.5 ≲ α ≲ 1.0). We thus suggest the use of RiB as a means to take into account the results of 3D hydrodynamics simulations in new 1D prescriptions of convective boundary mixing.

  3. Unstructured 3D grid toolbox for modeling and simulation

    SciTech Connect

    George, D.

    1997-11-01

    Computable 3D grids that accurately represent complex multimaterial geometries are essential for both static and time-dependent modeling and simulation. LaGriT, the grid toolbox developed at Los Alamos provides a sophisticated set of initial grid generation, grid maintenance and grid optimization tools. We present example grids that demonstrate the flexibility of the grid generator. Additionally, we present the results of an electrostatic calculation and a grain growth problem that illustrate the grid optimization features and the utility of the grid server architecture.

  4. Composite manufacturing: Simulation of 3-D resin transfer molding

    NASA Astrophysics Data System (ADS)

    Tan, Cheng Ping

    1998-10-01

    A technique was developed for simulating the resin transfer molding (RTM) process. The major feature of the technique is a computational steering system that enables the user to make changes during the simulation. Specifically, at any instance, the user can inspect the progress of the resin front. On the basis of the observed resin front position, the user can, as needed, change the port and vent locations, open and close ports and vents, adjust the inlet and exit pressures or flow rates, and reorient the mold with respect to the gravitational field. Additionally, the user can "rewind" the simulator to any previous time in the mold filling process, make any of the above changes and then continue the simulation. The technique is augmented by a computer code which has three main components, the Simulator, the Graphics User Interface (GUI), and the Global Data Storage. The Simulator is a finite element code that calculates the resin flow inside the fiber preform. The GUI serves as the interface between the user and the Simulator; it provides the commands to the Simulator and displays the results. The Global Data Storage is the module that manages the exchange of data between the GUI and the Simulator. The computer code (designated as SUPERTMsb-3D) is suitable for simulating the resin flow inside two-dimensional as well as three-dimensional fiber preforms of arbitrary shapes. The use of this computer code is illustrated through sample problems. These problems demonstrate how (with this code) the designer can establish the port and vent locations, opening and closing sequences of ports and vents such that the fiber preform is filled completely in the shortest time with the fewest number of vents.

  5. 3D FEM Simulation of Flank Wear in Turning

    NASA Astrophysics Data System (ADS)

    Attanasio, Aldo; Ceretti, Elisabetta; Giardini, Claudio

    2011-05-01

    This work deals with tool wear simulation. Studying the influence of tool wear on tool life, tool substitution policy and influence on final part quality, surface integrity, cutting forces and power consumption it is important to reduce the global process costs. Adhesion, abrasion, erosion, diffusion, corrosion and fracture are some of the phenomena responsible of the tool wear depending on the selected cutting parameters: cutting velocity, feed rate, depth of cut, …. In some cases these wear mechanisms are described by analytical models as a function of process variables (temperature, pressure and sliding velocity along the cutting surface). These analytical models are suitable to be implemented in FEM codes and they can be utilized to simulate the tool wear. In the present paper a commercial 3D FEM software has been customized to simulate the tool wear during turning operations when cutting AISI 1045 carbon steel with uncoated tungsten carbide tip. The FEM software was improved by means of a suitable subroutine able to modify the tool geometry on the basis of the estimated tool wear as the simulation goes on. Since for the considered couple of tool-workpiece material the main phenomena generating wear are the abrasive and the diffusive ones, the tool wear model implemented into the subroutine was obtained as combination between the Usui's and the Takeyama and Murata's models. A comparison between experimental and simulated flank tool wear curves is reported demonstrating that it is possible to simulate the tool wear development.

  6. Advanced system for 3D dental anatomy reconstruction and 3D tooth movement simulation during orthodontic treatment

    NASA Astrophysics Data System (ADS)

    Monserrat, Carlos; Alcaniz-Raya, Mariano L.; Juan, M. Carmen; Grau Colomer, Vincente; Albalat, Salvador E.

    1997-05-01

    This paper describes a new method for 3D orthodontics treatment simulation developed for an orthodontics planning system (MAGALLANES). We develop an original system for 3D capturing and reconstruction of dental anatomy that avoid use of dental casts in orthodontic treatments. Two original techniques are presented, one direct in which data are acquired directly form patient's mouth by mean of low cost 3D digitizers, and one mixed in which data are obtained by 3D digitizing of hydrocollids molds. FOr this purpose we have designed and manufactured an optimized optical measuring system based on laser structured light. We apply these 3D dental models to simulate 3D movement of teeth, including rotations, during orthodontic treatment. The proposed algorithms enable to quantify the effect of orthodontic appliance on tooth movement. The developed techniques has been integrated in a system named MAGALLANES. This original system present several tools for 3D simulation and planning of orthodontic treatments. The prototype system has been tested in several orthodontic clinic with very good results.

  7. Dust emission in simulated dwarf galaxies using GRASIL-3D

    NASA Astrophysics Data System (ADS)

    Santos-Santos, I. M.; Domínguez-Tenreiro, R.; Granato, G. L.; Brook, C. B.; Obreja, A.

    2017-03-01

    Recent Herschel observations of dwarf galaxies have shown a wide diversity in the shapes of their IR-submm spectral energy distributions as compared to more massive galaxies, presenting features that cannot be explained with the current models. In order to understand the physics driving these differences, we have computed the emission of a sample of simulated dwarf galaxies using the radiative transfer code GRASIL-3D. This code separately treats the radiative transfer in dust grains from molecular clouds and cirri. The simulated galaxies have masses ranging from 10^6-10^9 M_⊙ and have evolved within a Local Group environment by using CLUES initial conditions. We show that their IR band luminosities are in agreement with observations, with their SEDs reproducing naturally the particular spectral features observed. We conclude that the GRASIL-3D two-component model gives a physical interpretation to the emission of dwarf galaxies, with molecular clouds (cirri) as the warm (cold) dust components needed to recover observational data.

  8. Simulation of 3D Global Wave Propagation Through Geodynamic Models

    NASA Astrophysics Data System (ADS)

    Schuberth, B.; Piazzoni, A.; Bunge, H.; Igel, H.; Steinle-Neumann, G.

    2005-12-01

    This project aims at a better understanding of the forward problem of global 3D wave propagation. We use the spectral element program "SPECFEM3D" (Komatitsch and Tromp, 2002a,b) with varying input models of seismic velocities derived from mantle convection simulations (Bunge et al., 2002). The purpose of this approach is to obtain seismic velocity models independently from seismological studies. In this way one can test the effects of varying parameters of the mantle convection models on the seismic wave field. In order to obtain the seismic velocities from the temperature field of the geodynamical simulations we follow a mineral physics approach. Assuming a certain mantle composition (e.g. pyrolite with CMASF composition) we compute the stable phases for each depth (i.e. pressure) and temperature by system Gibbs free energy minimization. Elastic moduli and density are calculated from the equations of state of the stable mineral phases. For this we use a mineral physics database derived from calorimetric experiments (enthalphy and entropy of formation, heat capacity) and EOS parameters.

  9. Phase-field-based lattice Boltzmann finite-difference model for simulating thermocapillary flows.

    PubMed

    Liu, Haihu; Valocchi, Albert J; Zhang, Yonghao; Kang, Qinjun

    2013-01-01

    A phase-field-based hybrid model that combines the lattice Boltzmann method with the finite difference method is proposed for simulating immiscible thermocapillary flows with variable fluid-property ratios. Using a phase field methodology, an interfacial force formula is analytically derived to model the interfacial tension force and the Marangoni stress. We present an improved lattice Boltzmann equation (LBE) method to capture the interface between different phases and solve the pressure and velocity fields, which can recover the correct Cahn-Hilliard equation (CHE) and Navier-Stokes equations. The LBE method allows not only use of variable mobility in the CHE, but also simulation of multiphase flows with high density ratio because a stable discretization scheme is used for calculating the derivative terms in forcing terms. An additional convection-diffusion equation is solved by the finite difference method for spatial discretization and the Runge-Kutta method for time marching to obtain the temperature field, which is coupled to the interfacial tension through an equation of state. The model is first validated against analytical solutions for the thermocapillary driven convection in two superimposed fluids at negligibly small Reynolds and Marangoni numbers. It is then used to simulate thermocapillary migration of a three-dimensional deformable droplet and bubble at various Marangoni numbers and density ratios, and satisfactory agreement is obtained between numerical results and theoretical predictions.

  10. Coniferous Canopy BRF Simulation Based on 3-D Realistic Scene

    NASA Technical Reports Server (NTRS)

    Wang, Xin-yun; Guo, Zhi-feng; Qin, Wen-han; Sun, Guo-qing

    2011-01-01

    It is difficulties for the computer simulation method to study radiation regime at large-scale. Simplified coniferous model was investigate d in the present study. It makes the computer simulation methods such as L-systems and radiosity-graphics combined method (RGM) more powerf ul in remote sensing of heterogeneous coniferous forests over a large -scale region. L-systems is applied to render 3-D coniferous forest scenarios: and RGM model was used to calculate BRF (bidirectional refle ctance factor) in visible and near-infrared regions. Results in this study show that in most cases both agreed well. Meanwhiie at a tree and forest level. the results are also good.

  11. 3-D MHD Simulation of Oscillating Field Current Drive

    NASA Astrophysics Data System (ADS)

    Ebrahimi, F.; Prager, S. C.; Wright, J. C.

    2000-10-01

    Oscillating Field Current Drive (OFCD) is a proposed low frequency steady-state current drive technique for the Reversed Field Pinch (RFP). In OFCD toroidal and poloidal oscillating electric fields are applied with 90^circ phase difference to inject magnetic helicity. In the present work, the 3-D nonlinear, resistive MHD code DEBS is used to simulate OFCD in relaxed RFP plasmas. The present simulations are at high Lundquist number S=10^5 and low spect ratio R/a=1.5. The physics issues investigated are the response of background magnetic fluctuations to the oscillating fields, the relative contributions of the tearing mode dynamo and the oscillating fields to the current profile, and the sustainment and control of the steady-state current profile. Initial results with low amplitude oscillating fields show the expected increase in magnetic helicity and current. Results with higher amplitude will also be presented.

  12. MHD instabilities in accretion mounds - II. 3D simulations

    NASA Astrophysics Data System (ADS)

    Mukherjee, Dipanjan; Bhattacharya, Dipankar; Mignone, Andrea

    2013-10-01

    We investigate the onset of pressure-driven toroidal-mode instabilities in accretion mounds on neutron stars by 3D magnetohydrodynamic (MHD) simulations using the PLUTO MHD code. Our results confirm that for mounds beyond a threshold mass, instabilities form finger-like channels at the periphery, resulting in mass-loss from the magnetically confined mound. Ring-like mounds with hollow interior show the instabilities at the inner edge as well. We perform the simulations for mounds of different sizes to investigate the effect of the mound mass on the growth rate of the instabilities. We also investigate the effect of such instabilities on observables such as cyclotron resonant scattering features and timing properties of such systems.

  13. GBS: Global 3D simulation of tokamak edge region

    NASA Astrophysics Data System (ADS)

    Zhu, Ben; Fisher, Dustin; Rogers, Barrett; Ricci, Paolo

    2012-10-01

    A 3D two-fluid global code, namely Global Braginskii Solver (GBS), is being developed to explore the physics of turbulent transport, confinement, self-consistent profile formation, pedestal scaling and related phenomena in the edge region of tokamaks. Aimed at solving drift-reduced Braginskii equations [1] in complex magnetic geometry, the GBS is used for turbulence simulation in SOL region. In the recent upgrade, the simulation domain is expanded into close flux region with twist-shift boundary conditions. Hence, the new GBS code is able to explore global transport physics in an annular full-torus domain from the top of the pedestal into the far SOL. We are in the process of identifying and analyzing the linear and nonlinear instabilities in the system using the new GBS code. Preliminary results will be presented and compared with other codes if possible.[4pt] [1] A. Zeiler, J. F. Drake and B. Rogers, Phys. Plasmas 4, 2134 (1997)

  14. Optimizing prostate needle biopsy through 3D simulation

    NASA Astrophysics Data System (ADS)

    Zeng, Jianchao; Kaplan, Charles; Xuan, Jian Hua; Sesterhenn, Isabell A.; Lynch, John H.; Freedman, Matthew T.; Mun, Seong K.

    1998-06-01

    Prostate needle biopsy is used for the detection of prostate cancer. The protocol of needle biopsy that is currently routinely used in the clinical environment is the systematic sextant technique, which defines six symmetric locations on the prostate surface for needle insertion. However, this protocol has been developed based on the long-term observation and experience of urologists. Little quantitative or scientific evidence supports the use of this biopsy technique. In this research, we aim at developing a statistically optimized new prostate needle biopsy protocol to improve the quality of diagnosis of prostate cancer. This new protocol will be developed by using a three-dimensional (3-D) computer- based probability map of prostate cancer. For this purpose, we have developed a computer-based 3-D visualization and simulation system with prostate models constructed from the digitized prostate specimens, in which the process of prostate needle biopsy can be simulated automatically by the computer. In this paper, we first develop an interactive biopsy simulation mode in the system, and evaluate the performance of the automatic biopsy simulation with the sextant biopsy protocol by comparing the results by the urologist using the interactive simulation mode with respect to 53 prostate models. This is required to confirm that the automatic simulation is accurate and reliable enough for the simulation with respect to a large number of prostate models. Then we compare the performance of the existing protocols using the automatic biopsy simulation system with respect to 107 prostate models, which will statistically identify if one protocol is better than another. Since the estimation of tumor volume is extremely important in determining the significance of a tumor and in deciding appropriate treatment methods, we further investigate correlation between the tumor volume and the positive core volume with 89 prostate models. This is done in order to develop a method to

  15. Physics and 3D in Flash Simulations: Open Source Reality

    NASA Astrophysics Data System (ADS)

    Harold, J. B.; Dusenbery, P.

    2009-12-01

    Over the last decade our ability to deliver simulations over the web has steadily advanced. The improvements in speed of the Adobe Flash engine, and the development of open source tools to expand it, allow us to deliver increasingly sophisticated simulation based games through the browser, with no additional downloads required. In this paper we will present activities we are developing as part of two asteroids education projects: Finding NEO (funded through NSF and NASA SMD), and Asteroids! (funded through NSF). The first activity is Rubble!, an asteroids deflection game built on the open source Box2D physics engine. This game challenges players to push asteroids in to safe orbits before they crash in to the Earth. The Box2D engine allows us to go well beyond simple 2-body orbital calculations and incorporate “rubble piles”. These objects, which are representative of many asteroids, are composed of 50 or more individual rocks which gravitationally bind and separate in realistic ways. Even bombs can be modeled with sufficient physical accuracy to convince players of the hazards of trying to “blow up” incoming asteroids. The ability to easily build games based on underlying physical models allows us to address physical misconceptions in a natural way: by having the player operate in a world that directly collides with those misconceptions. Rubble! provides a particularly compelling example of this due to the variety of well documented misconceptions regarding gravity. The second activity is a Light Curve challenge, which uses the open source PaperVision3D tools to analyze 3D asteroid models. The goal of this activity is to introduce the player to the concept of “light curves”, measurements of asteroid brightness over time which are used to calculate the asteroid’s period. These measurements can even be inverted to generate three dimensional models of asteroids that are otherwise too small and distant to directly image. Through the use of the Paper

  16. Dual-scale phase-field simulation of Mg-Al alloy solidification

    NASA Astrophysics Data System (ADS)

    Monas, A.; Shchyglo, O.; Höche, D.; Tegeler, M.; Steinbach, I.

    2015-06-01

    Phase-field simulations of the nucleation and growth of primary α-Mg phase as well as secondary, β-phase of a Mg-Al alloy are presented. The nucleation model for α- and β-Mg phases is based on the “free growth model” by Greer et al.. After the α-Mg phase solidification we study a divorced eutectic growth of α- and β-Mg phases in a zoomed in melt channel between α-phase dendrites. The simulated cooling curves and final microstructures of α-grains are compared with experiments. In order to further enhance the resolution of the interdendritic region a high-performance computing approach has been used allowing significant simulation speed gain when using supercomputing facilities.

  17. Study, simulation and design of a 3D clinostat

    NASA Astrophysics Data System (ADS)

    Pavone, Valentina; Guarnieri, Vincenzo; Lobascio, Cesare; Soma, Aurelio; Bosso, Nicola; Lamantea, Matteo Maria

    High cost and limited number of physically executable experiments in space have introduced the need for ground simulation systems that enable preparing experiments to be carried out on board, identifying phenomena associated with the altered gravity conditions, and taking advantage of these conditions, as in Biotechnology. Among systems developed to simulate microgravity, especially for life sciences experiments, different types of clinostats were realized. This work deals with mechanical design of a three-dimensional clinostat and simulation of the dynamic behavior of the system by varying the operating parameters. The design and simulation phase was preceded by a careful analysis of the state of art and by the review of the most recent results, in particular from the major investigators of Life Sciences in Space. The mechanical design is quite innovative by adoption of a structure entirely in aluminum, which allows robustness while reducing the overall weight. The transmission system of motion has been optimized by means of brushless DC micro motors, light and compact, which helped to reduce weight, dimensions, power consumption and increase the reliability and durability of the system. The study of the dynamic behavior using SIMPACK, a multibody simulation software, led to results in line with those found in the most important and recent scientific publications. This model was also appropriately configured to represent any desired operating condition, and for eventual system scalability. It would be interesting to generate simulated hypogravity - e.g.: 0.38-g (Mars) or 0.17-g (Moon). This would allow to investigate how terrestrial life forms can grow in other planetary habitats, or to determine the gravity threshold response of different organisms. At the moment, such a system can only be achieved by centrifuges in real microgravity. We are confident that simulation and associated tests with our 3D clinostat can help adjusting the parameters allowing variable g

  18. Ground Motion and Variability from 3-D Deterministic Broadband Simulations

    NASA Astrophysics Data System (ADS)

    Withers, Kyle Brett

    The accuracy of earthquake source descriptions is a major limitation in high-frequency (> 1 Hz) deterministic ground motion prediction, which is critical for performance-based design by building engineers. With the recent addition of realistic fault topography in 3D simulations of earthquake source models, ground motion can be deterministically calculated more realistically up to higher frequencies. We first introduce a technique to model frequency-dependent attenuation and compare its impact on strong ground motions recorded for the 2008 Chino Hills earthquake. Then, we model dynamic rupture propagation for both a generic strike-slip event and blind thrust scenario earthquakes matching the fault geometry of the 1994 Mw 6.7 Northridge earthquake along rough faults up to 8 Hz. We incorporate frequency-dependent attenuation via a power law above a reference frequency in the form Q0fn, with high accuracy down to Q values of 15, and include nonlinear effects via Drucker-Prager plasticity. We model the region surrounding the fault with and without small-scale medium complexity in both a 1D layered model characteristic of southern California rock and a 3D medium extracted from the SCEC CVMSi.426 including a near-surface geotechnical layer. We find that the spectral acceleration from our models are within 1-2 interevent standard deviations from recent ground motion prediction equations (GMPEs) and compare well with that of recordings from strong ground motion stations at both short and long periods. At periods shorter than 1 second, Q(f) is needed to match the decay of spectral acceleration seen in the GMPEs as a function of distance from the fault. We find that the similarity between the intraevent variability of our simulations and observations increases when small-scale heterogeneity and plasticity are included, extremely important as uncertainty in ground motion estimates dominates the overall uncertainty in seismic risk. In addition to GMPEs, we compare with simple

  19. 3D Simulation Modeling of the Tooth Wear Process

    PubMed Central

    Dai, Ning; Hu, Jian; Liu, Hao

    2015-01-01

    Severe tooth wear is the most common non-caries dental disease, and it can seriously affect oral health. Studying the tooth wear process is time-consuming and difficult, and technological tools are frequently lacking. This paper presents a novel method of digital simulation modeling that represents a new way to study tooth wear. First, a feature extraction algorithm is used to obtain anatomical feature points of the tooth without attrition. Second, after the alignment of non-attrition areas, the initial homogeneous surface is generated by means of the RBF (Radial Basic Function) implicit surface and then deformed to the final homogeneous by the contraction and bounding algorithm. Finally, the method of bilinear interpolation based on Laplacian coordinates between tooth with attrition and without attrition is used to inversely reconstruct the sequence of changes of the 3D tooth morphology during gradual tooth wear process. This method can also be used to generate a process simulation of nonlinear tooth wear by means of fitting an attrition curve to the statistical data of attrition index in a certain region. The effectiveness and efficiency of the attrition simulation algorithm are verified through experimental simulation. PMID:26241942

  20. Unsteady 3D flow simulations in cranial arterial tree

    NASA Astrophysics Data System (ADS)

    Grinberg, Leopold; Anor, Tomer; Madsen, Joseph; Karniadakis, George

    2008-11-01

    High resolution unsteady 3D flow simulations in major cranial arteries have been performed. Two cases were considered: 1) a healthy volunteer with a complete Circle of Willis (CoW); and 2) a patient with hydrocephalus and an incomplete CoW. Computation was performed on 3344 processors of the new half petaflop supercomputer in TACC. Two new numerical approaches were developed and implemented: 1) a new two-level domain decomposition method, which couples continuous and discontinuous Galerkin discretization of the computational domain; and 2) a new type of outflow boundary conditions, which imposes, in an accurate and computationally efficient manner, clinically measured flow rates. In the first simulation, a geometric model of 65 cranial arteries was reconstructed. Our simulation reveals a high degree of asymmetry in the flow at the left and right parts of the CoW and the presence of swirling flow in most of the CoW arteries. In the second simulation, one of the main findings was a high pressure drop at the right anterior communicating artery (PCA). Due to the incompleteness of the CoW and the pressure drop at the PCA, the right internal carotid artery supplies blood to most regions of the brain.

  1. 3D Simulation Modeling of the Tooth Wear Process.

    PubMed

    Dai, Ning; Hu, Jian; Liu, Hao

    2015-01-01

    Severe tooth wear is the most common non-caries dental disease, and it can seriously affect oral health. Studying the tooth wear process is time-consuming and difficult, and technological tools are frequently lacking. This paper presents a novel method of digital simulation modeling that represents a new way to study tooth wear. First, a feature extraction algorithm is used to obtain anatomical feature points of the tooth without attrition. Second, after the alignment of non-attrition areas, the initial homogeneous surface is generated by means of the RBF (Radial Basic Function) implicit surface and then deformed to the final homogeneous by the contraction and bounding algorithm. Finally, the method of bilinear interpolation based on Laplacian coordinates between tooth with attrition and without attrition is used to inversely reconstruct the sequence of changes of the 3D tooth morphology during gradual tooth wear process. This method can also be used to generate a process simulation of nonlinear tooth wear by means of fitting an attrition curve to the statistical data of attrition index in a certain region. The effectiveness and efficiency of the attrition simulation algorithm are verified through experimental simulation.

  2. MPSalsa 3D Simulations of Chemically Reacting Flows

    DOE Data Explorer

    Many important scientific and engineering applications require a detailed analysis of complex systems with coupled fluid flow, thermal energy transfer, mass transfer and nonequilibrium chemical reactions. Currently, computer simulations of these complex reacting flow problems are limited to idealized systems in one or two spatial dimensions when coupled with a detailed, fundamental chemistry model. The goal of our research is to develop, analyze and implement advanced MP numerical algorithms that will allow high resolution 3D simulations with an equal emphasis on fluid flow and chemical kinetics modeling. In our research, we focus on the development of new, fully coupled, implicit solution strategies that are based on robust MP iterative solution methods (copied from http://www.cs.sandia.gov/CRF/MPSalsa/). These simulations are needed for scientific and technical areas such as: combustion research for transportation, atmospheric chemistry modeling for pollution studies, chemically reacting flow models for analysis and control of manufacturing processes, surface catalytic reactors for methane to methanol conversion and chemical vapor deposition (CVD) process modeling for production of advanced semiconductor materials (http://www.cs.sandia.gov/CRF/MPSalsa/).

    This project website provides six QuickTime videos of these simulations, along with a small image gallery and slideshow animations. A list of related publications and conference presentations is also made available.

  3. Massive parallel 3D PIC simulation of negative ion extraction

    NASA Astrophysics Data System (ADS)

    Revel, Adrien; Mochalskyy, Serhiy; Montellano, Ivar Mauricio; Wünderlich, Dirk; Fantz, Ursel; Minea, Tiberiu

    2017-09-01

    The 3D PIC-MCC code ONIX is dedicated to modeling Negative hydrogen/deuterium Ion (NI) extraction and co-extraction of electrons from radio-frequency driven, low pressure plasma sources. It provides valuable insight on the complex phenomena involved in the extraction process. In previous calculations, a mesh size larger than the Debye length was used, implying numerical electron heating. Important steps have been achieved in terms of computation performance and parallelization efficiency allowing successful massive parallel calculations (4096 cores), imperative to resolve the Debye length. In addition, the numerical algorithms have been improved in terms of grid treatment, i.e., the electric field near the complex geometry boundaries (plasma grid) is calculated more accurately. The revised model preserves the full 3D treatment, but can take advantage of a highly refined mesh. ONIX was used to investigate the role of the mesh size, the re-injection scheme for lost particles (extracted or wall absorbed), and the electron thermalization process on the calculated extracted current and plasma characteristics. It is demonstrated that all numerical schemes give the same NI current distribution for extracted ions. Concerning the electrons, the pair-injection technique is found well-adapted to simulate the sheath in front of the plasma grid.

  4. 3D MHD disruptions simulations of tokamaks plasmas

    NASA Astrophysics Data System (ADS)

    Paccagnella, Roberto; Strauss, Hank; Breslau, Joshua

    2008-11-01

    Tokamaks Vertical Displacement Events (VDEs) and disruptions simulations in toroidal geometry by means of a single fluid visco-resistive magneto-hydro-dynamic (MHD) model are presented in this paper. The plasma model, implemented in the M3D code [1], is completed with the presence of a 2D homogeneous wall with finite resistivity. This allows the study of the relatively slowly growing magneto-hydro-dynamical perturbation, the resistive wall mode (RWM), which is, in this work, the main drive of the disruptions. Amplitudes and asymmetries of the halo currents pattern at the wall are also calculated and comparisons with tokamak experimental databases and predictions for ITER are given. [1] W. Park, E.V. Belova, G.Y. Fu, X.Z. Tang, H.R. Strauss, L.E. Sugiyama, Phys. Plasmas 6 (1999) 1796.

  5. Photon Scattering in 3D Radiative MHD Simulations

    NASA Astrophysics Data System (ADS)

    Hayek, Wolfgang

    2009-09-01

    Recent results from 3D time-dependent radiative hydrodynamic simulations of stellar atmospheres are presented, which include the effects of coherent scattering in the radiative transfer treatment. Rayleigh scattering and electron scattering are accounted for in the source function, requiring an iterative solution of the transfer equation. Opacities and scattering coefficients are treated in the multigroup opacity approximation. The impact of scattering on the horizontal mean temperature structure is investigated, which is an important diagnostic for model atmospheres, with implications for line formation and stellar abundance measurements. We find that continuum scattering is not important for the atmosphere of a metal-poor Sun with metailicity [Fe/H] = -3.0, similar to the previously investigated photosphere at solar metallicity.

  6. 3D simulations of an electrostatic quadrupole injector

    SciTech Connect

    Grote, D.P. |; Friedman, A.; Yu, S.

    1993-02-01

    Analysis of the dynamics of a space charge dominated beam in a lattice of electrostatic focusing structures requires a full three-dimensional conic that includes self-consistent space charge fields and the fields from the complex conductor shapes. The existing WARP3d code, a particle simulation code which has been developed for heavy-ion fusion (HIF) applications contains machinery for handling particles in three-dimensional fields. A successive overrelaxation field solver with subgrid-scale placement of boundaries for rounded surface and four-fold symmetry has been added to the code. The electrostatic quadrupole (ESQ) injector for the ILSE accelerator facility being planned at Lawrence Berkeley Laboratory is shown as an application. The issue of concern is possible emittance degradation because the focusing voltages are a significant fraction of the particles` energy and because there are significant nonlinear fields arising from the shapes of the quadrupole structures.

  7. Colossal Tooling Design: 3D Simulation for Ergonomic Analysis

    NASA Technical Reports Server (NTRS)

    Hunter, Steve L.; Dischinger, Charles; Thomas, Robert E.; Babai, Majid

    2003-01-01

    The application of high-level 3D simulation software to the design phase of colossal mandrel tooling for composite aerospace fuel tanks was accomplished to discover and resolve safety and human engineering problems. The analyses were conducted to determine safety, ergonomic and human engineering aspects of the disassembly process of the fuel tank composite shell mandrel. Three-dimensional graphics high-level software, incorporating various ergonomic analysis algorithms, was utilized to determine if the process was within safety and health boundaries for the workers carrying out these tasks. In addition, the graphical software was extremely helpful in the identification of material handling equipment and devices for the mandrel tooling assembly/disassembly process.

  8. Simulation of 3D Chaotic Electroconvection in Shear Flow

    NASA Astrophysics Data System (ADS)

    Davidson, Scott; Mani, Ali

    2016-11-01

    Electroconvection, a microscale electrohydrodynamic phenomenon with chaotic features reminiscent of turbulence, provides the dominant transport mechanism in many electrochemical processes where ions are driven through ion-selective surfaces under large applied voltages. Electrodialysis, for example, desalinates water by flowing it between layers of ion-selective membranes with alternating selectivity while an electric field is applied normal to the membranes. This process leads to alternating channels becoming enriched and depleted of ions. Despite its key importance, much about how electroconvection enhances ion transport, particularly in the presence of crossflow, remains a mystery. We present results of 3D direct numerical simulations of electroconvection in a canonical geometry of an electrolyte between an ion-selective membrane and a reservoir with periodic sides subject to applied shear flow. We analyze the effects of crossflow on both flow statistics and qualitative structures in the fully chaotic regime. Stanford Graduate Fellowship, NSF GRFP.

  9. PAB3D Simulations for the CAWAPI F-16XL

    NASA Technical Reports Server (NTRS)

    Elmiligui, Alaa; Abdol-Hamid, K. S.; Massey, Steven J.

    2007-01-01

    Numerical simulations of the flow around F-16XL are performed as a contribution to the Cranked Arrow Wing Aerodynamic Project International (CAWAPI) using the PAB3D CFD code. Two turbulence models are used in the calculations: a standard k-! model, and the Shih-Zhu-Lumley (SZL) algebraic stress model. Seven flight conditions are simulated for the flow around the F-16XL where the free stream Mach number varies from 0.242 to 0.97. The range of angles of attack varies from 0deg to 20deg. Computational results, surface static pressure, boundary layer velocity profiles, and skin friction are presented and compared with flight data. Numerical results are generally in good agreement with flight data, considering that only one grid resolution is utilized for the different flight conditions simulated in this study. The ASM results are closer to the flight data than the k-! model results. The ASM predicted a stronger primary vortex, however, the origin of the vortex and footprint is approximately the same as in the k-! predictions.

  10. Enhancing Simulation of Sand Behavior through 3D Subdivision Techniques

    NASA Astrophysics Data System (ADS)

    Clothier, M.; Bailey, M.

    2011-12-01

    is a planetary rover interacting with our sand simulation. Sand that is actively interacting with a rover wheel will be represented as an individual particle whereas sand that is further under the surface will be represented by a 3D region that represents several particles. As a particle region moves closer to the surface, it subdivides into smaller regions until individual sand particles are left. Our technique uses a variation of a 3D Voronoi decomposition in order to generate regions of sand. However, in our iteration, sand on the surface will be subdivided as particles whereas sand deeper into the earth will be subdivided into subsequently larger regions. By doing this, we can represent many more particles of sand than through traditional means. In addition, we have the added benefit of being able to parallelize the interaction between active particles through the use of the GPU. As such, not only are we able to represent vast amounts of sand, but we can also utilize more individual particles at the interaction source. An enhanced sand model through the use of subdivision techniques and GPUs has great potential for earth science research. Our collaborations with JPL have helped to further refine our simulation framework. As a result, we feel this work could also benefit other earth science fields, such as understanding sinkholes and debris flows.

  11. 3D Dynamic Earthquake Fracture Simulation (Test Case)

    NASA Astrophysics Data System (ADS)

    Korkusuz Öztürk, Yasemin; Meral Özel, Nurcan; Ando, Ryosuke

    2016-04-01

    A 3D dynamic earthquake fracture simulation is being developed for the fault structures which are non-planar to understand heterogeneous stress states in the Marmara Sea. Locating in a seismic gap, a large earthquake is expected in the center of the Sea of Marmara. Concerning the fact that more than 14 million inhabitants of İstanbul, located very closely to the Marmara Sea, the importance of the analysis of the Central Marmara Sea is extremely high. A few 3D dynamic earthquake fracture studies have been already done in the Sea of Marmara for pure right lateral strike-slip stress regimes (Oglesby and Mai, 2012; Aochi and Ulrich, 2015). In this study, a 3D dynamic earthquake fracture model with heterogeneous stress patches from the TPV5, a SCEC code validation case, is adapted. In this test model, the fault and the ground surfaces are gridded by a scalene triangulation technique using GMSH program. For a grid size changing between 0.616 km and 1.050 km the number of elements for the fault surface is 1984 and for the ground surface is 1216. When these results are compared with Kaneko's results for TPV5 from SPECFEM3D, reliable findings could be observed for the first 6.5 seconds (stations on the fault) although a stability problem is encountered after this time threshold. To solve this problem grid sizes are made smaller, so the number of elements increase 7986 for the fault surface and 4867 for the ground surface. On the other hand, computational problems arise in that case, since the computation time is directly proportional to the number of total elements and the required memory also increases with the square of that. Therefore, it is expected that this method can be adapted for less coarse grid cases, regarding the main difficulty coming from the necessity of an effective supercomputer and run time limitations. The main objective of this research is to obtain 3D dynamic earthquake rupture scenarios, concerning not only planar and non-planar faults but also

  12. 3D mapping and simulation of Geneva Lake environmental data

    NASA Astrophysics Data System (ADS)

    Villard, Roch; Maignan, Michel; Kanevski, Mikhail; Rapin, Francois; Klein, Audrey

    2010-05-01

    The Geneva Lake is the biggest alpine and subalpine lake in central Europe. The depth of this lake is 309 meters and its total volume of water is 89 billions m3. It takes, on average, around twelve years so that waters of the lake are completely brewed. Furthermore the Geneva lake waters are rich in dissolved substances as carbonate, sulfate. The quantity of particles in suspension in the lake, which mainly arrived from the Rhône, is nowadays around height million of tones. The International Commission for the Leman Lake (CIPEL) works about the improvement of the quality of this lake since 1962. In the present study three dimensional environmental data (temperature, oxygen and nitrate) which cover the period from 1954 to 2008, for a total of 27'500 cases are investigated. We are interested to study the evolution of the temperature of the lake because there is an impact on the reproduction of fishes and also because the winter brewing of the water makes the re-oxygenation of deep-water. In order that biological balance is maintained in a lake, there must be enough oxygen in the water. Moreover, we work on nitrate distribution and evolution because contributions in fertilizers cause eutrophication of lake. The data are very numerous when we consider the time series, some of them with more than 300 occurrences, but there are between 2 and 15 data available for spatial cartography. The basic methodology used for the analysis, mapping and simulations of 3D patterns of environmental data is based on geostatistical predictions (family of kriging models) and conditional stochastic simulations. Spatial and temporal variability, 3D monitoring networks changing over time, make this study challenging. An important problem is also to make interpolation/simulations over a long period of time, like ten years. One way used to overcome this problem, consists in using a weighted average of ten variograms during this period. 3D mapping was carried out using environment data for

  13. Simulation of underwater explosion benchmark experiments with ALE3D

    SciTech Connect

    Couch, R.; Faux, D.

    1997-05-19

    Some code improvements have been made during the course of this study. One immediately obvious need was for more flexibility in the constitutive representation for materials in shell elements. To remedy this situation, a model with a tabular representation of stress versus strain and rate dependent effects was implemented. This was required in order to obtain reasonable results in the IED cylinder simulation. Another deficiency was in the ability to extract and plot variables associated with shell elements. The pipe whip analysis required the development of a scheme to tally and plot time dependent shell quantities such as stresses and strains. This capability had previously existed only for solid elements. Work was initiated to provide the same range of plotting capability for structural elements that exist with the DYNA3D/TAURUS tools. One of the characteristics of these problems is the disparity in zoning required in the vicinity of the charge and bubble compared to that needed in the far field. This disparity can cause the equipotential relaxation logic to provide a less than optimal solution. Various approaches were utilized to bias the relaxation to obtain more optimal meshing during relaxation. Extensions of these techniques have been developed to provide more powerful options, but more work still needs to be done. The results presented here are representative of what can be produced with an ALE code structured like ALE3D. They are not necessarily the best results that could have been obtained. More experience in assessing sensitivities to meshing and boundary conditions would be very useful. A number of code deficiencies discovered in the course of this work have been corrected and are available for any future investigations.

  14. First 3-D simulations of meteor plasma dynamics and turbulence

    NASA Astrophysics Data System (ADS)

    Oppenheim, Meers M.; Dimant, Yakov S.

    2015-02-01

    Millions of small but detectable meteors hit the Earth's atmosphere every second, creating trails of hot plasma that turbulently diffuse into the background atmosphere. For over 60 years, radars have detected meteor plasmas and used these signals to infer characteristics of the meteoroid population and upper atmosphere, but, despite the importance of meteor radar measurements, the complex processes by which these plasmas evolve have never been thoroughly explained or modeled. In this paper, we present the first fully 3-D simulations of meteor evolution, showing meteor plasmas developing instabilities, becoming turbulent, and inhomogeneously diffusing into the background ionosphere. These instabilities explain the characteristics and strength of many radar observations, in particular the high-resolution nonspecular echoes made by large radars. The simulations reveal how meteors create strong electric fields that dig out deep plasma channels along the Earth's magnetic fields. They also allow researchers to explore the impacts of the intense winds and wind shears, commonly found at these altitudes, on meteor plasma evolution. This study will allow the development of more sophisticated models of meteor radar signals, enabling the extraction of detailed information about the properties of meteoroid particles and the atmosphere.

  15. Morphology of uranium electrodeposits on cathode in electrorefining process: A phase-field simulation

    NASA Astrophysics Data System (ADS)

    Shibuta, Yasushi; Sato, Takumi; Suzuki, Toshio; Ohta, Hirokazu; Kurata, Masaki

    2013-05-01

    Morphology of uranium electrodeposits on cathode with respect to applied voltage, zirconium concentration in the molten salt and the size of primary deposit during pyroprocessing is systematically investigated by the phase-field simulation. It is found that there is a threshold zirconium concentration in the molten salt demarcating planar and cellular/needle-like electrodeposits, which agrees with experimental results. In addition, the effect of size of primary deposits on the morphology of electrodeposits is examined. It is then confirmed that cellular/needle-like electrodeposits are formed from large primary deposits at all applied voltages considered, whereas both the planar and cellular/needle-like electrodeposits are formed from the primary deposits of 10 μm and less.

  16. Comparison of Phase Field Crystal and Molecular Dynamics Simulations for a Shrinking Grain

    SciTech Connect

    Radhakrishnan, Balasubramaniam; Gorti, Sarma B; Nicholson, Don M

    2012-01-01

    The Phase-Field Crystal (PFC) model represents the atomic density as a continuous function, whose spatial distribution evolves at diffusional, rather than vibrational time scales. PFC provides a tool to study defect interactions at the atomistic level but over longer time scales than in molecular dynamics (MD). We examine the behavior of the PFC model with the goal of relating the PFC parameters to physical parameters of real systems, derived from MD simulations. For this purpose we model the phenomenon of the shrinking of a spherical grain situated in a matrix. By comparing the rate of shrinking of the central grain using MD and PFC we obtain a relationship between PFC and MD time scales for processes driven by grain boundary diffusion. The morphological changes in the central grain including grain shape and grain rotation are also examined in order to assess the accuracy of the PFC in capturing the evolution path predicted by MD.

  17. Precipitation of T₁ and θ' Phase in Al-4Cu-1Li-0.25Mn During Age Hardening: Microstructural Investigation and Phase-Field Simulation.

    PubMed

    Häusler, Ines; Schwarze, Christian; Bilal, Muhammad Umer; Ramirez, Daniela Valencia; Hetaba, Walid; Kamachali, Reza Darvishi; Skrotzki, Birgit

    2017-01-28

    Experimental and phase field studies of age hardening response of a high purity Al-4Cu-1Li-0.25Mn-alloy (mass %) during isothermal aging are conducted. In the experiments, two hardening phases are identified: the tetragonal θ' (Al₂Cu) phase and the hexagonal T₁ (Al₂CuLi) phase. Both are plate shaped and of nm size. They are analyzed with respect to the development of their size, number density and volume fraction during aging by applying different analysis techniques in TEM in combination with quantitative microstructural analysis. 3D phase-field simulations of formation and growth of θ' phase are performed in which the full interfacial, chemical and elastic energy contributions are taken into account. 2D simulations of T₁ phase are also investigated using multi-component diffusion without elasticity. This is a first step toward a complex phase-field study of T₁ phase in the ternary alloy. The comparison between experimental and simulated data shows similar trends. The still unsaturated volume fraction indicates that the precipitates are in the growth stage and that the coarsening/ripening stage has not yet been reached.

  18. 3D Numerical Simulation on the Rockslide Generated Tsunamis

    NASA Astrophysics Data System (ADS)

    Chuang, M.; Wu, T.; Wang, C.; Chu, C.

    2013-12-01

    The rockslide generated tsunami is one of the most devastating nature hazards. However, the involvement of the moving obstacle and dynamic free-surface movement makes the numerical simulation a difficult task. To describe both the fluid motion and solid movement at the same time, we newly developed a two-way fully-coupled moving solid algorithm with 3D LES turbulent model. The free-surface movement is tracked by volume of fluid (VOF) method. The two-step projection method is adopted to solve the Navier-Stokes type government equations. In the new moving solid algorithm, a fictitious body force is implicitly prescribed in MAC correction step to make the cell-center velocity satisfied with the obstacle velocity. We called this method the implicit velocity method (IVM). Because no extra terms are added to the pressure Poission correction, the pressure field of the fluid part is stable, which is the key of the two-way fluid-solid coupling. Because no real solid material is presented in the IVM, the time marching step is not restricted to the smallest effective grid size. Also, because the fictitious force is implicitly added to the correction step, the resulting velocity is accurate and fully coupled with the resulting pressure field. We validated the IVM by simulating a floating box moving up and down on the free-surface. We presented the time-history obstacle trajectory and compared it with the experimental data. Very accurate result can be seen in terms of the oscillating amplitude and the period (Fig. 1). We also presented the free-surface comparison with the high-speed snapshots. At the end, the IVM was used to study the rock-slide generated tsunamis (Liu et al., 2005). Good validations on the slide trajectory and the free-surface movement will be presented in the full paper. From the simulation results (Fig. 2), we observed that the rockslide generated waves are manly caused by the rebounding waves from two sides of the sliding rock after the water is dragging

  19. 3D radiative transfer in colliding wind binaries: Application of the SimpleX algorithm to 3D SPH simulations

    NASA Astrophysics Data System (ADS)

    Madura, Thomas; Clementel, Nicola; Kruip, Chael; Icke, Vincent; Gull, Theodore

    2014-09-01

    We present the first results of full 3D radiative transfer simulations of the colliding stellar winds in a massive binary system. We accomplish this by applying the SIMPLEX algorithm for 3D radiative transfer on an unstructured Delaunay grid to recent 3D smoothed particle hydrodynamics (SPH) simulations of the colliding winds in the binary system η Carinae. We use SIMPLEX to obtain detailed ionization fractions of hydrogen and helium, in 3D, at the resolution of the original SPH simulations. We show how the SIMPLEX simulations can be used to generate synthetic spectral data cubes for comparison to data obtained with the Hubble Space Telescope (HST)/Space Telescope Imaging Spectrograph as part of a multi-cycle program to map changes in η Car's extended interacting wind structures across one binary cycle. Comparison of the HST observations to the SIMPLEX models can help lead to more accurate constraints on the orbital, stellar, and wind parameters of the η Car system, such as the primary's mass-loss rate and the companion's temperature and luminosity. While we initially focus specifically on the η Car binary, the numerical methods employed can be applied to numerous other colliding wind (WR140, WR137, WR19) and dusty 'pinwheel' (WR104, WR98a) binary systems. One of the biggest remaining mysteries is how dust can form and survive in such systems that contain a hot, luminous O star. Coupled with 3D hydrodynamical simulations, SIMPLEX simulations have the potential to help determine the regions where dust can form and survive in these unique objects.

  20. Phase-field simulation of microstructural development induced by interdiffusion fluxes under multiple gradients

    NASA Astrophysics Data System (ADS)

    Mohanty, Rashmi Ranjan

    2009-12-01

    The diffuse-interface phase-field model is a powerful method to simulate and predict mesoscale microstructure evolution in materials using fundamental properties of thermodynamics and kinetics. The objective of this dissertation is to develop phase-field model for simulation and prediction of interdiffusion behavior and evolution of microstructure in multiphase binary and ternary systems under composition and/or temperature gradients. Simulations were carried out with emphasis on multicomponent diffusional interactions in single-phase system, and microstructure evolution in multiphase systems using thermodynamics and kinetics of real systems such as Ni-Al and Ni-Cr-Al. In addition, selected experimental studies were carried out to examine interdiffusion and microstructure evolution in Ni-Cr-Al and Fe-Ni-Al alloys at 1000°C. Based on Onsager's formalism, a phase-field model was developed for the first time to simulate the diffusion process under an applied temperature gradient (i.e., thermotransport) in single- and two-phase binary alloys. Development of concentration profiles with uphill diffusion and the occurrence of zero-flux planes were studied in single-phase diffusion couples using a regular solution model for a hypothetical ternary system. Zero-flux plane for a component was observed to develop for diffusion couples at the composition that corresponds to the activity of that component in one of the terminal alloys. Morphological evolution of interphase boundary in solid-to-solid two-phase diffusion couples (fcc-gamma vs. B2-beta) was examined in Ni-Cr-Al system with actual thermodynamic data and concentration dependent chemical mobility. With the instability introduced as a small initial compositional fluctuation at the interphase boundary, the evolution of the interface morphology was found to vary largely as a function of terminal alloys and related composition-dependent chemical mobility. In a binary Ni-Al system, multiphase diffusion couples of fcc

  1. Phase field simulations of autocatalytic formation of alpha lamellar colonies in Ti-6Al-4V

    DOE PAGES

    Radhakrishnan, Bala; Gorti, Sarma; Babu, Suresh Sudharsanam

    2016-09-13

    Here, we present phase field simulations incorporating energy contributions due to thermodynamics, and anisotropic interfacial and strain energies, to demonstrate the nucleation and growth of multiple variants of alpha from beta in Ti-6Al-4V under isothermal conditions. The simulations focused on the effect of thermodynamic driving force and nucleation rate on the morphology of the transformed alpha assuming that the partitioning of V between beta and alpha is negligible for short isothermal holds. The results indicate that a high nucleation rate favors the formation of the basket-weave structure. However, at a lower nucleation rate the simulations show the intragranular nucleation ofmore » a colony structure by an autocatalytic nucleation mechanism adjacent to a pre-existing alpha variant. New side-plates of the same variant appear to nucleate progressively and grow to form the colony. The isothermal simulation results are used to offer a possible explanation for the transition from a largely basket weave structure to a colony structure inside narrow layer bands occurring during continuous heating and cooling conditions encountered during laser additive manufacturing of Ti-6Al-4V.« less

  2. Phase-field simulation of weld solidification microstructure in an Al Cu alloy

    NASA Astrophysics Data System (ADS)

    Farzadi, A.; Do-Quang, M.; Serajzadeh, S.; Kokabi, A. H.; Amberg, G.

    2008-09-01

    Since the mechanical properties and the integrity of the weld metal depend on the solidification behaviour and the resulting microstructural characteristics, understanding weld pool solidification is of importance to engineers and scientists. Thermal and fluid flow conditions affect the weld pool geometry and solidification parameters. During solidification of the weld pool, a columnar grain structure develops in the weld metal. Prediction of the formation of the microstructure during welding may be an important and supporting factor for technology optimization. Nowadays, increasing computing power allows direct simulations of the dendritic and cell morphology of columnar grains in the molten zone for specific temperature conditions. In this study, the solidification microstructures of the weld pool at different locations along the fusion boundary are simulated during gas tungsten arc welding of Al-3wt%Cu alloy using the phase-field model for the directional solidification of dilute binary alloys. A macroscopic heat transfer and fluid flow model was developed to assess the solidification parameters, notably the temperature gradient and solidification growth rate. The effect of the welding speed is investigated. Computer simulations of the solidification conditions and the formation of a cellular morphology during the directional solidification in gas tungsten arc welding are described. Moreover, the simulation results are compared with existing theoretical models and experimental findings.

  3. Phase field simulations of autocatalytic formation of alpha lamellar colonies in Ti-6Al-4V

    SciTech Connect

    Radhakrishnan, Bala; Gorti, Sarma; Babu, Suresh Sudharsanam

    2016-09-13

    Here, we present phase field simulations incorporating energy contributions due to thermodynamics, and anisotropic interfacial and strain energies, to demonstrate the nucleation and growth of multiple variants of alpha from beta in Ti-6Al-4V under isothermal conditions. The simulations focused on the effect of thermodynamic driving force and nucleation rate on the morphology of the transformed alpha assuming that the partitioning of V between beta and alpha is negligible for short isothermal holds. The results indicate that a high nucleation rate favors the formation of the basket-weave structure. However, at a lower nucleation rate the simulations show the intragranular nucleation of a colony structure by an autocatalytic nucleation mechanism adjacent to a pre-existing alpha variant. New side-plates of the same variant appear to nucleate progressively and grow to form the colony. The isothermal simulation results are used to offer a possible explanation for the transition from a largely basket weave structure to a colony structure inside narrow layer bands occurring during continuous heating and cooling conditions encountered during laser additive manufacturing of Ti-6Al-4V.

  4. Phase field simulations of autocatalytic formation of alpha lamellar colonies in Ti-6Al-4V

    SciTech Connect

    Radhakrishnan, Bala; Gorti, Sarma; Babu, Suresh Sudharsanam

    2016-09-13

    Here, we present phase field simulations incorporating energy contributions due to thermodynamics, and anisotropic interfacial and strain energies, to demonstrate the nucleation and growth of multiple variants of alpha from beta in Ti-6Al-4V under isothermal conditions. The simulations focused on the effect of thermodynamic driving force and nucleation rate on the morphology of the transformed alpha assuming that the partitioning of V between beta and alpha is negligible for short isothermal holds. The results indicate that a high nucleation rate favors the formation of the basket-weave structure. However, at a lower nucleation rate the simulations show the intragranular nucleation of a colony structure by an autocatalytic nucleation mechanism adjacent to a pre-existing alpha variant. New side-plates of the same variant appear to nucleate progressively and grow to form the colony. The isothermal simulation results are used to offer a possible explanation for the transition from a largely basket weave structure to a colony structure inside narrow layer bands occurring during continuous heating and cooling conditions encountered during laser additive manufacturing of Ti-6Al-4V.

  5. Report on the Implementation of Homogeneous Nucleation Scheme in MARMOT-based Phase Field Simulation

    SciTech Connect

    Li, Yulan; Hu, Shenyang Y.; Sun, Xin

    2013-09-30

    In this report, we summarized our effort in developing mesoscale phase field models for predicting precipitation kinetics in alloys during thermal aging and/or under irradiation in nuclear reactors. The first part focused on developing a method to predict the thermodynamic properties of critical nuclei such as the sizes and concentration profiles of critical nuclei, and nucleation barrier. These properties are crucial for quantitative simulations of precipitate evolution kinetics with phase field models. Fe-Cr alloy was chosen as a model alloy because it has valid thermodynamic and kinetic data as well as it is an important structural material in nuclear reactors. A constrained shrinking dimer dynamics (CSDD) method was developed to search for the energy minimum path during nucleation. With the method we are able to predict the concentration profiles of the critical nuclei of Cr-rich precipitates and nucleation energy barriers. Simulations showed that Cr concentration distribution in the critical nucleus strongly depends on the overall Cr concentration as well as temperature. The Cr concentration inside the critical nucleus is much smaller than the equilibrium concentration calculated by the equilibrium phase diagram. This implies that a non-classical nucleation theory should be used to deal with the nucleation of Cr precipitates in Fe-Cr alloys. The growth kinetics of both classical and non-classical nuclei was investigated by the phase field approach. A number of interesting phenomena were observed from the simulations: 1) a critical classical nucleus first shrinks toward its non-classical nucleus and then grows; 2) a non-classical nucleus has much slower growth kinetics at its earlier growth stage compared to the diffusion-controlled growth kinetics. 3) a critical classical nucleus grows faster at the earlier growth stage than the non-classical nucleus. All of these results demonstrated that it is critical to introduce the correct critical nuclei into phase

  6. 3D finite element simulation of TIG weld pool

    NASA Astrophysics Data System (ADS)

    Kong, X.; Asserin, O.; Gounand, S.; Gilles, P.; Bergheau, J. M.; Medale, M.

    2012-07-01

    The aim of this paper is to propose a three-dimensional weld pool model for the moving gas tungsten arc welding (GTAW) process, in order to understand the main factors that limit the weld quality and improve the productivity, especially with respect to the welding speed. Simulation is a very powerful tool to help in understanding the physical phenomena in the weld process. A 3D finite element model of heat and fluid flow in weld pool considering free surface of the pool and traveling speed has been developed for the GTAW process. Cast3M software is used to compute all the governing equations. The free surface of the weld pool is calculated by minimizing the total surface energy. The combined effects of surface tension gradient, buoyancy force, arc pressure, arc drag force to drive the fluid flow is included in our model. The deformation of the weld pool surface and the welding speed affect fluid flow, heat flow and thus temperature gradients and molten pool dimensions. Welding trials study is presented to compare our numerical results with macrograph of the molten pool.

  7. Parallel Cartesian grid refinement for 3D complex flow simulations

    NASA Astrophysics Data System (ADS)

    Angelidis, Dionysios; Sotiropoulos, Fotis

    2013-11-01

    A second order accurate method for discretizing the Navier-Stokes equations on 3D unstructured Cartesian grids is presented. Although the grid generator is based on the oct-tree hierarchical method, fully unstructured data-structure is adopted enabling robust calculations for incompressible flows, avoiding both the need of synchronization of the solution between different levels of refinement and usage of prolongation/restriction operators. The current solver implements a hybrid staggered/non-staggered grid layout, employing the implicit fractional step method to satisfy the continuity equation. The pressure-Poisson equation is discretized by using a novel second order fully implicit scheme for unstructured Cartesian grids and solved using an efficient Krylov subspace solver. The momentum equation is also discretized with second order accuracy and the high performance Newton-Krylov method is used for integrating them in time. Neumann and Dirichlet conditions are used to validate the Poisson solver against analytical functions and grid refinement results to a significant reduction of the solution error. The effectiveness of the fractional step method results in the stability of the overall algorithm and enables the performance of accurate multi-resolution real life simulations. This material is based upon work supported by the Department of Energy under Award Number DE-EE0005482.

  8. Permafrost simulations in the Dolomites using Alpine3D

    NASA Astrophysics Data System (ADS)

    Steinkogler, W.; Bavay, M.; Lehning, M.

    2012-04-01

    Permafrost is a strong indicator for climate change and an important structural fact for Alpine infrastructures. Therefore, its spatial distribution and temporal evolution are of great interest for scientists and practitioners. The effects of permafrost degradation due to climate change on slope stability, and thus debris flows or rock falls generated in high alpine regions, seriously affects mountain communities. Simulations as will be presented in this work can aid to identify, simulate and forecast impacts of climate change scenarios on permafrost areas. The potential permafrost distribution in the Veneto region (Italy) was calculated for a spatial resolution of 150 m by applying the hydro-meteorological model Alpine3D and the one-dimensional model of vegetation, snow, and soil SNOWPACK. Information on land use and soil characteristics served as input data and for the initialization of the model, which was then run for 12 years with the meteorological data provided from up to 44 automatic weather stations inside or close to the investigation area as driving variables. Sub-surface temperatures calculated by the model served as indicators for the likelihood of permafrost. According to the sub-surface conditions the areas situated within the potential permafrost realm are further subdivided into different zones. Areas were defined as class 'permafrost likely' as long as they are < -1°C for the whole calculation period. Areas which are < -1°C for at least 50 % of the calculation period are classified as 'permafrost possible' based on the assumption that a short term warming would not be able to totally remove existing permafrost. Our calculations for the Veneto region show that only a comparatively small fraction of the total investigation area is likely to have permafrost under the given climatic conditions. For the whole Veneto region (21283 km2), a total area of 2.2 km2 is of class 'permafrost likely' and additionally 5.3 km2 are of class 'permafrost possible'.

  9. A space-time fractional phase-field model with tunable sharpness and decay behavior and its efficient numerical simulation

    NASA Astrophysics Data System (ADS)

    Li, Zheng; Wang, Hong; Yang, Danping

    2017-10-01

    We present a space-time fractional Allen-Cahn phase-field model that describes the transport of the fluid mixture of two immiscible fluid phases. The space and time fractional order parameters control the sharpness and the decay behavior of the interface via a seamless transition of the parameters. Although they are shown to provide more accurate description of anomalous diffusion processes and sharper interfaces than traditional integer-order phase-field models do, fractional models yield numerical methods with dense stiffness matrices. Consequently, the resulting numerical schemes have significantly increased computational work and memory requirement. We develop a lossless fast numerical method for the accurate and efficient numerical simulation of the space-time fractional phase-field model. Numerical experiments shows the utility of the fractional phase-field model and the corresponding fast numerical method.

  10. Identification of coronal heating events in 3D simulations

    NASA Astrophysics Data System (ADS)

    Kanella, Charalambos; Gudiksen, Boris V.

    2017-07-01

    Context. The solar coronal heating problem has been an open question in the science community since 1939. One of the proposed models for the transport and release of mechanical energy generated in the sub-photospheric layers and photosphere is the magnetic reconnection model that incorporates Ohmic heating, which releases a part of the energy stored in the magnetic field. In this model many unresolved flaring events occur in the solar corona, releasing enough energy to heat the corona. Aims: The problem with the verification and quantification of this model is that we cannot resolve small scale events due to limitations of the current observational instrumentation. Flaring events have scaling behavior extending from large X-class flares down to the so far unobserved nanoflares. Histograms of observable characteristics of flares show powerlaw behavior for energy release rate, size, and total energy. Depending on the powerlaw index of the energy release, nanoflares might be an important candidate for coronal heating; we seek to find that index. Methods: In this paper we employ a numerical three-dimensional (3D)-magnetohydrodynamic (MHD) simulation produced by the numerical code Bifrost, which enables us to look into smaller structures, and a new technique to identify the 3D heating events at a specific instant. The quantity we explore is the Joule heating, a term calculated directly by the code, which is explicitly correlated with the magnetic reconnection because it depends on the curl of the magnetic field. Results: We are able to identify 4136 events in a volume 24 × 24 × 9.5 Mm3 (i.e., 768 × 786 × 331 grid cells) of a specific snapshot. We find a powerlaw slope of the released energy per second equal to αP = 1.5 ± 0.02, and two powerlaw slopes of the identified volume equal to αV = 1.53 ± 0.03 and αV = 2.53 ± 0.22. The identified energy events do not represent all the released energy, but of the identified events, the total energy of the largest events

  11. 3-D numerical simulations of volcanic ash transport and deposition

    NASA Astrophysics Data System (ADS)

    Suzuki, Y. J.; Koyaguchi, T.

    2012-12-01

    During an explosive volcanic eruption, volcanic gas and pyroclasts are ejected from the volcanic vent. The pyroclasts are carried up within a convective plume, advected by the surrounding wind field, and sediment on the ground depending on their terminal velocity. The fine ash are expected to have atmospheric residence, whereas the coarser particles form fall deposits. Accurate modeling of particle transport and deposition is of critical importance from the viewpoint of disaster prevention. Previously, some particle-tracking models (e.g., PUFF) and advection-diffusion models (e.g., TEPHRA2 and FALL3D) tried to forecast particle concentration in the atmosphere and particle loading at ground level. However, these models assumed source conditions (the grain-size distribution, plume height, and mass release location) based on the simple 1-D model of convective plume. In this study, we aim to develop a new 3-D model which reproduces both of the dynamics of convective plume and the ash transport. The model is designed to describe the injection of eruption cloud and marker particles from a circular vent above a flat surface into the stratified atmosphere. Because the advection is the predominant mechanism of particle transport near the volcano, the diffusive process is not taken into account in this model. The distribution of wind velocity is given as an initial condition. The model of the eruption cloud dynamics is based on the 3-D time-dependent model of Suzuki et al. (2005). We apply a pseudo-gas model to calculate the eruption cloud dynamics: the effect of particle separation on the cloud dynamics is not considered. In order to reproduce the drastic change of eruption cloud density, we change the effective gas constant and heat capacity of the mixture in the equation of state for ideal gases with the mixing ratio between the ejected material and entrained air. In order to calculate the location and movement of ash particles, the present model employs Lagrangian marker

  12. Metos3D: a marine ecosystem toolkit for optimization and simulation in 3-D - Simulation Package v0.2

    NASA Astrophysics Data System (ADS)

    Piwonski, J.; Slawig, T.

    2015-06-01

    A general programming interface for parameter identification for marine ecosystem models is introduced. A comprehensive solver software for periodic steady-states is implemented that includes a fixed point iteration (spin-up) and a Newton solver. The software is based on the Portable, Extensible Toolkit for Scientific Computation (PETSc) library and uses transport matrices for efficient off-line simulation in 3-D. In addition to the usage of PETSc's parallel data structures and PETSc's Newton solver, an own load balancing algorithm is implemented. A simple verification is carried out using a well investigated biogeochemical model for phosphate (PO4) and dissolved organic phosphorous (DOP) with 7 parameters. The model is coupled via the interface to transport matrices that correspond to a longitudinal and latitudinal resolution of 2.8125° and 15 vertical layers. Initial tests show that both solvers and the load balancing algorithm work correctly. Further experiments demonstrate the robustness of the Newton solver with respect to parameter variations. Moreover, the numerical tests reveal that, with optimal control settings, the Newton solver converges at least 6 times faster towards a solution than the spin-up. However, additional twin experiments reveal differences between both solvers regarding a derivative-based black-box optimization. Whereas an optimization run with spin-up-based model evaluations is capable to identify model parameters of a reference solution, Newton-based model evaluations result in an inaccurate gradient approximation.

  13. 20 and 3D Numerical Simulations of Flux Cancellation

    NASA Technical Reports Server (NTRS)

    Karpen, Judith T.; DeVore, C.; Antiochos, S. K.; Linton, M. G.

    2009-01-01

    Cancellation of magnetic flux in the solar photosphere and chromosphere has been linked observationally and theoretically to a broad range of solar activity, from filament channel formation to CME initiation. Because this phenomenon is typically measured at only a single layer in the atmosphere, in the radial (line of sight) component of the magnetic field, the actual processes behind this observational signature are ambiguous. It is clear that reconnection is involved in some way, but the location of the reconnection sites and associated connectivity changes remain uncertain in most cases. We are using numerical modeling to demystify flux cancellation, beginning with the simplest possible configuration: a subphotospheric Lundquist flux tube surrounded by a potential field, immersed in a gravitationally stratified atmosphere, spanning many orders of magnitude in plasma beta. In this system, cancellation is driven slowly by a 2-cell circulation pattern imposed in the convection zone, such that the tops of the cells are located around the beta= 1 level (Le., the photosphere) and the flows converge and form a downdraft at the polarity inversion line; note however that no flow is imposed along the neutral line. We will present the results of 2D and 3D MHD-AMR simulations of flux cancellation, in which the flux at the photosphere begins in either an unsheared or sheared state. In all cases, a lOW-lying flux rope is formed by reconnection at the polarity inversion line within a few thousand seconds. The flux rope remains stable and does not rise, however, in contrast to models which do not include the presence of significant mass loading.

  14. 2D and 3D Numerical Simulations of Flux Cancellation

    NASA Technical Reports Server (NTRS)

    Karpen, Judith T.; DeVore, C.; Antiochos, S. K.; Linton, M. G.

    2009-01-01

    Cancellation of magnetic flux in the solar photosphere and chromosphere has been linked observationally and theoretically to a broad range of solar activity, from filament channel formation to CME initiation. Because this phenomenon is typically measured at only a single layer in the atmosphere, in the radial (line of sight) component of the magnetic field, the actual processes behind this observational signature are ambiguous. It is clear that reconnection is involved in some way, but the location of the reconnection sites and associated connectivity changes remain uncertain in most cases. We are using numerical modeling to demystify flux cancellation, beginning with the simplest possible configuration: a subphotospheric Lundquist flux tube surrounded by a potential field, immersed in a gravitationally stratified atmosphere, spanning many orders of magnitude in plasma beta. In this system, cancellation is driven slowly by a 2-cell circulation pattern imposed in the convection zone, such that the tops of the cells are located around the beta=1 level (i.e., the photosphere) and the flows converge and form a downdraft at the polarity inversion line; note however that no flow is imposed along the neutral line. We will present the results of 2D and 3D MHD-AMR simulations of flux cancellation, in which the flux at the photosphere begins in either an unsheared or sheared state. In all cases, a low-lying flux rope is formed by reconnection at the polarity inversion line within a few thousand seconds. The flux rope remains stable and does not rise, however, in contrast to models which do not include the presence of significant mass loading.

  15. 2D and 3D Numerical Simulations of Flux Cancellation

    NASA Technical Reports Server (NTRS)

    Karpen, Judith T.; DeVore, C.; Antiochos, S. K.; Linton, M. G.

    2009-01-01

    Cancellation of magnetic flux in the solar photosphere and chromosphere has been linked observationally and theoretically to a broad range of solar activity, from filament channel formation to CME initiation. Because this phenomenon is typically measured at only a single layer in the atmosphere, in the radial (line of sight) component of the magnetic field, the actual processes behind this observational signature are ambiguous. It is clear that reconnection is involved in some way, but the location of the reconnection sites and associated connectivity changes remain uncertain in most cases. We are using numerical modeling to demystify flux cancellation, beginning with the simplest possible configuration: a subphotospheric Lundquist flux tube surrounded by a potential field, immersed in a gravitationally stratified atmosphere, spanning many orders of magnitude in plasma beta. In this system, cancellation is driven slowly by a 2-cell circulation pattern imposed in the convection zone, such that the tops of the cells are located around the beta=1 level (i.e., the photosphere) and the flows converge and form a downdraft at the polarity inversion line; note however that no flow is imposed along the neutral line. We will present the results of 2D and 3D MHD-AMR simulations of flux cancellation, in which the flux at the photosphere begins in either an unsheared or sheared state. In all cases, a low-lying flux rope is formed by reconnection at the polarity inversion line within a few thousand seconds. The flux rope remains stable and does not rise, however, in contrast to models which do not include the presence of significant mass loading.

  16. Towards implementing plate tectonics in 3D mantle convection simulations

    NASA Astrophysics Data System (ADS)

    Bollada, Peter; Davies, Huw

    2010-05-01

    One of the great challenges in numerical mantle convection simulations is to achieve models that naturally develop plate tectonic like behaviour at the surface. In this work we are looking to achieve such models by investigating the set of models where a single consistent rheology is used for the whole model. We have started by investigating a viscoelastic rheology, related to the Oldroyd-B model from the field of polymers. The goal will be to have the parameter that controls the relaxation between elastic and viscous behaviour to depend upon temperature, pressure and strain-rate. With an appropriate choice of this dependence we have, on the near surface, high viscous/elastic regions interfaced with lower, pure viscous, regions of high strain-rate; while it also becomes more viscous at depth in the interior. In this way we hope to obtain plate like behaviour at the surface which naturally progresses to viscous convective behaviour in the interior. We have started to implement this model in the established mantle 3D finite element spherical mantle convection code TERRA (Baumgardner, 1984). Some parts of the model have been implemented as a force (to be combined with the gravitational body force) on the right hand side. The work has required us to develop and code in TERRA: (i) methods to overcome the continuity problem of the stress field stemming from the fact that the velocity field is represented by linear finite elements; (ii) new operators to handle stress and its gradients; (iii) methods to analyse plate-like behaviour at the surface (iv) the necessary functional dependence of viscosity and elastic relaxation time on temperature, strain-rate and pressure We will present the background to the work, its implementation and results.

  17. Phase-field simulation of stripe arrays on metal bcc(110) surfaces.

    PubMed

    Yu, Yan-Mei; Backofen, Rainer; Voigt, Axel

    2008-05-01

    By using a phase-field model, we simulate formation and growth of stripe arrays starting with anisotropic growth of islands under the Ehrlich-Schwoebel barrier on metal bcc(110) surfaces. The anisotropy is incorporated in terms of attachment kinetics that is locally limited at the island edge aligned to the y axis (or 100 ) and instantaneous at the island edge aligned to the x axis (or 110 ). By reproducing the stripe arrays under various anisotropy magnitudes, we investigate dynamics of formation and growth of the stripe arrays. While enhancing coarsening in the y direction, the anisotropy suppresses coarsening in the x direction at the early stage, which contributes to formation of stripe arrays. At long times, the stripe arrays develop the quasiperiodic uniaxial structure with the selected transversal slope and the decreasing longitudinal slope as consequence of competition between coarsening and roughening. At the case of the large anisotropy magnitude, the fast roughening is caused by the strongly limited attachment kinetics, where the transversal coarsening turns fast and then the uniaxial growth is broken finally. For the weak roughening at the case of the reduced anisotropy magnitude, the slow transversal coarsening is achieved with the fast longitudinal coarsening, which contributes to the stripe arrays of the regular period and the increasing uniaxial length. Such arrays have the potential to be used as templates to grow one-dimensional nanostructures.

  18. Atomistically Informed Extended Gibbs Energy Description for Phase-Field Simulation of Tempering of Martensitic Steel

    PubMed Central

    Shchyglo, Oleg; Hammerschmidt, Thomas; Čak, Miroslav; Drautz, Ralf; Steinbach, Ingo

    2016-01-01

    In this study we propose a unified multi-scale chemo-mechanical description of the BCT (Body-Centered Tetragonal) to BCC (Body-Centered Cubic) order-disorder transition in martensitic steel by adding the mechanical degrees of freedom to the standard CALPHAD (CALculation of PHAse Diagrams) type Gibbs energy description. The model takes into account external strain, the effect of carbon composition on the lattice parameter and elastic moduli. The carbon composition effect on the lattice parameters and elastic constants is described by a sublattice model with properties obtained from DFT (Density Functional Theory) calculations; the temperature dependence of the elasticity parameters is estimated from available experimental data. This formalism is crucial for studying the kinetics of martensite tempering in realistic microstructures. The obtained extended Gibbs energy description opens the way to phase-field simulations of tempering of martensitic steel comprising microstructure evolution, carbon diffusion and lattice symmetry change due to the ordering/disordering of carbon atoms under multiaxial load. PMID:28773790

  19. Phase-field simulations of coherent precipitate morphologies and coarsening kinetics

    NASA Astrophysics Data System (ADS)

    Vaithyanathan, Venugopalan

    2002-09-01

    The primary aim of this research is to enhance the fundamental understanding of coherent precipitation reactions in advanced metallic alloys. The emphasis is on a particular class of precipitation reactions which result in ordered intermetallic precipitates embedded in a disordered matrix. These precipitation reactions underlie the development of high-temperature Ni-base superalloys and ultra-light aluminum alloys. Phase-field approach, which has emerged as the method of choice for modeling microstructure evolution, is employed for this research with the focus on factors that control the precipitate morphologies and coarsening kinetics, such as precipitate volume fractions and lattice mismatch between precipitates and matrix. Two types of alloy systems are considered. The first involves L1 2 ordered precipitates in a disordered cubic matrix, in an attempt to model the gamma' precipitates in Ni-base superalloys and delta' precipitates in Al-Li alloys. The effect of volume fraction on coarsening kinetics of gamma' precipitates was investigated using two-dimensional (2D) computer simulations. With increase in volume fraction, larger fractions of precipitates were found to have smaller aspect ratios in the late stages of coarsening, and the precipitate size distributions became wider and more positively skewed. The most interesting result was associated with the effect of volume fraction on the coarsening rate constant. Coarsening rate constant as a function of volume fraction extracted from the cubic growth law of average half-edge length was found to exhibit three distinct regimes: anomalous behavior or decreasing rate constant with volume fraction at small volume fractions ( ≲ 20%), volume fraction independent or constant behavior for intermediate volume fractions (˜20--50%), and the normal behavior or increasing rate constant with volume fraction for large volume fractions ( ≳ 50%). The second alloy system considered was Al-Cu with the focus on understanding

  20. 3D GRMHD and GRPIC Simulations of Disk-Jet Coupling and Emission

    SciTech Connect

    Nishikawa, Ken-Ichi; Mizuno, Y.; Watson, M.; Hardee, P.; Fuerst, S.; Wu, K.; Fishman, G.J.; /NASA, Marshall

    2006-12-19

    We investigate jet formation in black-hole systems using 3-D General Relativistic Particle-In-Cell (GRPIC) and 3-D GRMHD simulations. GRPIC simulations, which allow charge separations in a collisionless plasma, do not need to invoke the frozen condition as in GRMHD simulations. 3-D GRPIC simulations show that jets are launched from Kerr black holes as in 3-D GRMHD simulations, but jet formation in the two cases may not be identical. Comparative study of black hole systems with GRPIC and GRMHD simulations with the inclusion of radiate transfer will further clarify the mechanisms that drive the evolution of disk-jet systems.

  1. 3D scientific visualization of reservoir simulation post-processing

    SciTech Connect

    Sousa, M.C.; Miranda-Filho, D.N.

    1994-12-31

    This paper describes a 3D visualization software designed at PETROBRAS and TecGraf/PUC-RJ in Brazil for the analysis of reservoir engineering post-processing data. It offers an advanced functional environment on graphical workstations with intuitive and ergonomic interface. Applications to real reservoir models show the enriching features of the software.

  2. 3-D General Relativistic MHD Simulations of Generating Jets

    NASA Astrophysics Data System (ADS)

    Nishikawa, K.-I.; Koide, S.; Shibata, K.; Kudoh, T.; Frank, J.; Sol, H.

    1999-12-01

    We have investigated the dynamics of an accretion disk around Schwarzschild black holes initially threaded by a uniform poloidal magnetic field in a non-rotating corona (either in a steady-state infalling state or in hydrostatic equilibrium) around a non-rotating black hole using a 3-D GRMHD with the ``axisymmetry'' along the z-direction. Magnetic field is tightly twisted by the rotation of the disk, and plasmas in the shocked region of the disk are accelerated by J x B force to form bipolar relativistic jets. In order to investigate variabilities of generated relativistic jets and magnetic field structure inside jets, we have performed calculations using the 3-D GRMHD code with a full 3-dimensional system. We will investigate how the third dimension affects the global disk dynamics and jet generation.

  3. 3-D General Relativistic MHD Simulations of Generating Jets

    NASA Astrophysics Data System (ADS)

    Nishikawa, K.-I.; Koide, S.; Shibata, K.; Kudoh, T.; Sol, H.; Hughes, J. P.

    2000-12-01

    We have investigated the dynamics of an accretion disk around Schwarzschild black holes initially threaded by a uniform poloidal magnetic field in a non-rotating corona (either in a steady-state infalling state) around a non-rotating black hole using a 3-D GRMHD with the ``axisymmetry'' along the z-direction. Magnetic field is tightly twisted by the rotation of the disk, and plasmas in the shocked region of the disk are accelerated by J x B force to form bipolar relativistic jets. In order to investigate variabilities of generated relativistic jets and magnetic field structure inside jets, we have performed calculations using the 3-D GRMHD code with a full 3-dimensional system. We will investigate how the third dimension affects the global disk dynamics and jet generation.

  4. DREAM3D simulations of inner-belt dynamics

    SciTech Connect

    Cunningham, Gregory Scott

    2015-05-26

    A 1973 paper by Lyons and Thorne explains the two-belt structure for electrons in the inner magnetosphere as a balance between inward radial diffusion and loss to the atmosphere, where the loss to the atmosphere is enabled by pitch-angle scattering from Coulomb and wave-particle interactions. In the 1973 paper, equilibrium solutions to a decoupled set of 1D radial diffusion equations, one for each value of the first invariant of motion, μ, were computed to produce the equilibrium two-belt structure. Each 1D radial diffusion equation incorporated an L-and μ-dependent `lifetime' due to the Coulomb and wave-particle interactions. This decoupling of the problem is appropriate under the assumption that radial diffusion is slow in comparison to pitch-angle scattering. However, for some values of μ and L the lifetime associated with pitch-angle scattering is comparable to the timescale associated with radial diffusion, suggesting that the true equilibrium solutions might reflect `coupled modes' involving pitch-angle scattering and radial diffusion and thus requiring a 3D diffusion model. In the work we show here, we have computed the equilibrium solutions using our 3D diffusion model, DREAM3D, that allows for such coupling. We find that the 3D equilibrium solutions are quite similar to the solutions shown in the 1973 paper when we use the same physical models for radial diffusion and pitch-angle scattering from hiss. However, we show that the equilibrium solutions are quite sensitive to various aspects of the physics model employed in the 1973 paper that can be improved, suggesting that additional work needs to be done to understand the two-belt structure.

  5. Using 3-D Numerical Weather Data in Piloted Simulations

    NASA Technical Reports Server (NTRS)

    Daniels, Taumi S.

    2016-01-01

    This report describes the process of acquiring and using 3-D numerical model weather data sets in NASA Langley's Research Flight Deck (RFD). A set of software tools implement the process and can be used for other purposes as well. Given time and location information of a weather phenomenon of interest, the user can download associated numerical weather model data. These data are created by the National Oceanic and Atmospheric Administration (NOAA) High Resolution Rapid Refresh (HRRR) model, and are then processed using a set of Mathworks' Matlab(TradeMark) scripts to create the usable 3-D weather data sets. Each data set includes radar re ectivity, water vapor, component winds, temperature, supercooled liquid water, turbulence, pressure, altitude, land elevation, relative humidity, and water phases. An open-source data processing program, wgrib2, is available from NOAA online, and is used along with Matlab scripts. These scripts are described with sucient detail to make future modi cations. These software tools have been used to generate 3-D weather data for various RFD experiments.

  6. Method and simulation to study 3D crosstalk perception

    NASA Astrophysics Data System (ADS)

    Khaustova, Dar'ya; Blondé, Laurent; Huynh-Thu, Quan; Vienne, Cyril; Doyen, Didier

    2012-03-01

    To various degrees, all modern 3DTV displays suffer from crosstalk, which can lead to a decrease of both visual quality and visual comfort, and also affect perception of depth. In the absence of a perfect 3D display technology, crosstalk has to be taken into account when studying perception of 3D stereoscopic content. In order to improve 3D presentation systems and understand how to efficiently eliminate crosstalk, it is necessary to understand its impact on human perception. In this paper, we present a practical method to study the perception of crosstalk. The approach consists of four steps: (1) physical measurements of a 3DTV, (2) building of a crosstalk surface based on those measurements and representing specifically the behavior of that 3TV, (3) manipulation of the crosstalk function and application on reference images to produce test images degraded by crosstalk in various ways, and (4) psychophysical tests. Our approach allows both a realistic representation of the behavior of a 3DTV and the easy manipulation of its resulting crosstalk in order to conduct psycho-visual experiments. Our approach can be used in all studies requiring the understanding of how crosstalk affects perception of stereoscopic content and how it can be corrected efficiently.

  7. Towards an integrated numerical simulator for crack-seal vein microstructure: Coupling phase-field with the Discrete Element Method

    NASA Astrophysics Data System (ADS)

    Virgo, Simon; Ankit, Kumar; Nestler, Britta; Urai, Janos L.

    2016-04-01

    Crack-seal veins form in a complex interplay of coupled thermal, hydraulic, mechanical and chemical processes. Their formation and cyclic growth involves brittle fracturing and dilatancy, phases of increased fluid flow and the growth of crystals that fill the voids and reestablish the mechanical strength. Existing numerical models of vein formation focus on selected aspects of the coupled process. Until today, no model exists that is able to use a realistic representation of the fracturing AND sealing processes, simultaneously. To address this challenge, we propose the bidirectional coupling of two numerical methods that have proven themselves as very powerful to model the fundamental processes acting in crack-seal systems: Phase-field and the Discrete Element Method (DEM). The phase-field Method was recently successfully extended to model the precipitation of quartz crystals from an aqueous solution and applied to model the sealing of a vein over multiple opening events (Ankit et al., 2013; Ankit et al., 2015a; Ankit et al., 2015b). The advantage over former, purely kinematic approaches is that in phase-field, the crystal growth is modeled based on thermodynamic and kinetic principles. Different driving forces for microstructure evolution, such as chemical bulk free energy, interfacial energy, elastic strain energy and different transport processes, such as mass diffusion and advection, can be coupled and the effect on the evolution process can be studied in 3D. The Discrete Element Method was already used in several studies to model the fracturing of rocks and the incremental growth of veins by repeated fracturing (Virgo et al., 2013; Virgo et al., 2014). Materials in DEM are represented by volumes of packed spherical particles and the response to the material to stress is modeled by interaction of the particles with their nearest neighbours. For rocks, in 3D, the method provides a realistic brittle failure behaviour. Exchange Routines are being developed that

  8. A parallel domain decomposition-based implicit method for the Cahn-Hilliard-Cook phase-field equation in 3D

    NASA Astrophysics Data System (ADS)

    Zheng, Xiang; Yang, Chao; Cai, Xiao-Chuan; Keyes, David

    2015-03-01

    We present a numerical algorithm for simulating the spinodal decomposition described by the three dimensional Cahn-Hilliard-Cook (CHC) equation, which is a fourth-order stochastic partial differential equation with a noise term. The equation is discretized in space and time based on a fully implicit, cell-centered finite difference scheme, with an adaptive time-stepping strategy designed to accelerate the progress to equilibrium. At each time step, a parallel Newton-Krylov-Schwarz algorithm is used to solve the nonlinear system. We discuss various numerical and computational challenges associated with the method. The numerical scheme is validated by a comparison with an explicit scheme of high accuracy (and unreasonably high cost). We present steady state solutions of the CHC equation in two and three dimensions. The effect of the thermal fluctuation on the spinodal decomposition process is studied. We show that the existence of the thermal fluctuation accelerates the spinodal decomposition process and that the final steady morphology is sensitive to the stochastic noise. We also show the evolution of the energies and statistical moments. In terms of the parallel performance, it is found that the implicit domain decomposition approach scales well on supercomputers with a large number of processors.

  9. A parallel domain decomposition-based implicit method for the Cahn–Hilliard–Cook phase-field equation in 3D

    SciTech Connect

    Zheng, Xiang; Yang, Chao; Cai, Xiao-Chuan; Keyes, David

    2015-03-15

    We present a numerical algorithm for simulating the spinodal decomposition described by the three dimensional Cahn–Hilliard–Cook (CHC) equation, which is a fourth-order stochastic partial differential equation with a noise term. The equation is discretized in space and time based on a fully implicit, cell-centered finite difference scheme, with an adaptive time-stepping strategy designed to accelerate the progress to equilibrium. At each time step, a parallel Newton–Krylov–Schwarz algorithm is used to solve the nonlinear system. We discuss various numerical and computational challenges associated with the method. The numerical scheme is validated by a comparison with an explicit scheme of high accuracy (and unreasonably high cost). We present steady state solutions of the CHC equation in two and three dimensions. The effect of the thermal fluctuation on the spinodal decomposition process is studied. We show that the existence of the thermal fluctuation accelerates the spinodal decomposition process and that the final steady morphology is sensitive to the stochastic noise. We also show the evolution of the energies and statistical moments. In terms of the parallel performance, it is found that the implicit domain decomposition approach scales well on supercomputers with a large number of processors.

  10. Phase-field model simulation of ferroelectric/antiferroelectric materials microstructure evolution under multiphysics loading

    NASA Astrophysics Data System (ADS)

    Zhang, Jingyi

    Ferroelectric (FE) and closely related antiferroelectric (AFE) materials have unique electromechanical properties that promote various applications in the area of capacitors, sensors, generators (FE) and high density energy storage (AFE). These smart materials with extensive applications have drawn wide interest in the industrial and scientific world because of their reliability and tunable property. However, reliability issues changes its paradigms and requires guidance from detailed mechanism theory as the materials applications are pushed for better performance. A host of modeling work were dedicated to study the macro-structural behavior and microstructural evolution in FE and AFE material under various conditions. This thesis is focused on direct observation of domain evolution under multiphysics loading for both FE and AFE material. Landau-Devonshire time-dependent phase field models were built for both materials, and were simulated in finite element software Comsol. In FE model, dagger-shape 90 degree switched domain was observed at preexisting crack tip under pure mechanical loading. Polycrystal structure was tested under same condition, and blocking effect of the growth of dagger-shape switched domain from grain orientation difference and/or grain boundary was directly observed. AFE ceramic model was developed using two sublattice theory, this model was used to investigate the mechanism of energy efficiency increase with self-confined loading in experimental tests. Consistent results was found in simulation and careful investigation of calculation results gave confirmation that origin of energy density increase is from three aspects: self-confinement induced inner compression field as the cause of increase of critical field, fringe leak as the source of elevated saturation polarization and uneven defects distribution as the reason for critical field shifting and phase transition speed. Another important affecting aspect in polycrystalline materials is the

  11. A phase-field simulation of uranium dendrite growth on the cathode in the electrorefining process

    NASA Astrophysics Data System (ADS)

    Shibuta, Yasushi; Unoura, Seiji; Sato, Takumi; Shibata, Hiroki; Kurata, Masaki; Suzuki, Toshio

    2011-07-01

    The uranium dendrite growth on the cathode during the pyroprocessing of uranium is investigated using a novel phase-field model, in which electrodeposition of uranium and zirconium from the molten-salt is taken into account. The threshold concentration of zirconium in the molten salt demarcating the dendritic and planar growth is then estimated as a function of the current density. Moreover, the growth process of both the dendritic and planar electrodeposits has been demonstrated by way of varying the mobility of the phase field, which consists of the effect of attachment kinetics and diffusion.

  12. Simulating the Cortical 3D Visuomotor Transformation of Reach Depth

    PubMed Central

    Blohm, Gunnar

    2012-01-01

    We effortlessly perform reach movements to objects in different directions and depths. However, how networks of cortical neurons compute reach depth from binocular visual inputs remains largely unknown. To bridge the gap between behavior and neurophysiology, we trained a feed-forward artificial neural network to uncover potential mechanisms that might underlie the 3D transformation of reach depth. Our physiologically-inspired 4-layer network receives distributed 3D visual inputs (1st layer) along with eye, head and vergence signals. The desired motor plan was coded in a population (3rd layer) that we read out (4th layer) using an optimal linear estimator. After training, our network was able to reproduce all known single-unit recording evidence on depth coding in the parietal cortex. Network analyses predict the presence of eye/head and vergence changes of depth tuning, pointing towards a gain-modulation mechanism of depth transformation. In addition, reach depth was computed directly from eye-centered (relative) visual distances, without explicit absolute depth coding. We suggest that these effects should be observable in parietal and pre-motor areas. PMID:22815979

  13. Phase-field simulation of counter-current spontaneous imbibition in a fractured heterogeneous porous medium

    NASA Astrophysics Data System (ADS)

    Rokhforouz, M. R.; Akhlaghi Amiri, H. A.

    2017-06-01

    Spontaneous imbibition is well-known to be one of the most effective processes of oil recovery in fractured reservoirs. However, the detailed pore-scale mechanisms of the counter-current imbibition process and the effects of different fluid/rock parameters on this phenomenon have not yet been deeply addressed. This work presents the results of a new pore-level numerical study of counter-current spontaneous imbibition, using coupled Cahn-Hilliard phase field and Navier-Stokes equations, solved by a finite element method. A 2D fractured medium was constructed consisting of a nonhomogeneous porous matrix, in which the grains were represented by an equilateral triangular array of circles with different sizes and initially saturated with oil, and a fracture, adjacent to the matrix, initially saturated with water and supported by low rate water inflow. Through invasion of water into the matrix, oil drops were expelled one by one from the matrix to the fracture, and in the matrix, water progressed by forming capillary fingerings, with characteristics corresponding to the experimental observations. The effects of wettability, viscosity ratio, and interfacial tension were investigated. In strongly water-wet matrix, with grain contact angles of θ < π/8, different micro-scale mechanisms were successfully captured, including oil film thinning and rupture, fluids' contact line movement, water bridging, and oil drop detachment. It was notified that there was a specific grain contact angle for this simulated model, θ = π/4, above it, matrix oil recovery was negligible by imbibition, while below it, the imbibition rate and oil recovery were significantly increased by decreasing the contact angle. In simulated mixed wet models, water, coming from the fracture, just invaded the neighboring water-wet grains; the water front was stopped moving as it met the oil-wet grains or wide pores/throats. Increasing water-oil interfacial tension, in the range of 0.005-0.05 N/m, resulted in

  14. 3D stress field simulation for Greater Munich, Germany

    NASA Astrophysics Data System (ADS)

    Ziegler, Moritz; Heidbach, Oliver; Reinecker, John; Przybycin, Anna Maria; Scheck-Wenderoth, Magdalena

    2016-04-01

    Geotechnical applications such as tunneling, storage of waste, wellbore planning, or reservoir engineering requires detailed 3D information on the rock properties and behavior of the continuum. One of the key parameters is the contemporary crustal in-situ stress state. However, generally the availability of stress data on reservoir scale is scarce or no data exists at all. Furthermore, stress data is often limited to the orientation of the maximum horizontal stress. Hence, geomechanical-numerical modelling provides an approximation of a continuous description of the 3D in-situ stress state. We present a model workflow that shows (1) how to calibrate a regional scale model of Greater Munich with stress orientations and magnitudes mainly from borehole data and (2) how to derive from the regional model boundary conditions for a local high-resolution model of a geothermal reservoir site. This approach using two models is an alternative to the required trade-off between resolution, computational cost and a sufficient number of calibration data which is otherwise inevitable for a single model. The incorporated 3D geological models contain the topography from a digital elevation model and 6 stratigraphic units with different elasto-plastic rock properties. The local model mimics the area of a planned reservoir and its resolution is significantly higher than in the regional model and down to 10 m near the planned borehole trajectories using 21×106 tetrahedron finite elements with linear approximation functions. The uncertainties of the calibrated regional model are large since no information on the magnitude of the maximum horizontal stress is available. Even in the entire Greater Munich area only two reliable leak-off tests that deliver the magnitude of the minimum horizontal stress could be used. These uncertainties are transferred also to the local model. Hence we also show how to quantify for the workflow in general the systematic uncertainties and discuss

  15. Building a 3D Virtual Liver: Methods for Simulating Blood Flow and Hepatic Clearance on 3D Structures

    PubMed Central

    Rezania, Vahid; Tuszynski, Jack

    2016-01-01

    In this paper, we develop a spatio-temporal modeling approach to describe blood and drug flow, as well as drug uptake and elimination, on an approximation of the liver. Extending on previously developed computational approaches, we generate an approximation of a liver, which consists of a portal and hepatic vein vasculature structure, embedded in the surrounding liver tissue. The vasculature is generated via constrained constructive optimization, and then converted to a spatial grid of a selected grid size. Estimates for surrounding upscaled lobule tissue properties are then presented appropriate to the same grid size. Simulation of fluid flow and drug metabolism (hepatic clearance) are completed using discretized forms of the relevant convective-diffusive-reactive partial differential equations for these processes. This results in a single stage, uniformly consistent method to simulate equations for blood and drug flow, as well as drug metabolism, on a 3D structure representative of a liver. PMID:27649537

  16. Building a 3D Virtual Liver: Methods for Simulating Blood Flow and Hepatic Clearance on 3D Structures.

    PubMed

    White, Diana; Coombe, Dennis; Rezania, Vahid; Tuszynski, Jack

    2016-01-01

    In this paper, we develop a spatio-temporal modeling approach to describe blood and drug flow, as well as drug uptake and elimination, on an approximation of the liver. Extending on previously developed computational approaches, we generate an approximation of a liver, which consists of a portal and hepatic vein vasculature structure, embedded in the surrounding liver tissue. The vasculature is generated via constrained constructive optimization, and then converted to a spatial grid of a selected grid size. Estimates for surrounding upscaled lobule tissue properties are then presented appropriate to the same grid size. Simulation of fluid flow and drug metabolism (hepatic clearance) are completed using discretized forms of the relevant convective-diffusive-reactive partial differential equations for these processes. This results in a single stage, uniformly consistent method to simulate equations for blood and drug flow, as well as drug metabolism, on a 3D structure representative of a liver.

  17. DREAM3D simulations of inner-belt dynamics

    NASA Astrophysics Data System (ADS)

    Cunningham, G.

    2015-12-01

    A 1973 paper by Lyons and Thorne explains the two-belt structure for electrons in the inner magnetosphere as a balance between inward radial diffusion and loss to the atmosphere due to pitch-angle scattering from Coulomb and VLF wave-particle interactions. In this paper, equilibrium solutions to a set of 1D radial diffusion equations, one for each value of the first invariant of motion, μ, were computed to produce the equilibrium structure. Each diffusion equation incorporated an L- and μ-dependent `lifetime' due to the Coulomb and wave-particle interactions. This model is appropriate under the assumption that radial diffusion is slow in comparison to pitch-angle scattering, and that there is no acceleration caused by the VLF wave-particle interactions. We have revisited this model using our DREAM3D 3D diffusion code, which allows the user to explicitly model the diffusion in pitch-angle and momentum rather than using a lifetime. We find that a) replacing the lifetimes with an explicit model of pitch-angle diffusion, thus allowing for coupling between radial and pitch-angle diffusion, affects the equilibrium structure, and b) over the long time scales needed to reach equilibrium, significant acceleration due to VLF wave particle interactions takes place due to the 'cross-terms' in pitch-angle and momentum and the sharp gradient in the equilibrium pitch-angle distributions. We also find that the equilibrium solutions are quite sensitive to various aspects of the physics model employed in the 1973 paper that can be improved, suggesting that additional work needs to be done to fully understand the equilibirum nature of the trapped electron radiation belts.

  18. 3-D Simulations of NSTAR Ion Thruster Plasma Interactions

    NASA Technical Reports Server (NTRS)

    Wang, J.; Brophy, J.; Polk, J.; Brinza, D.

    1996-01-01

    Described is a Particle-in-Cell with Monte Carlo Collision code developed to perform detailed three-dimensional ion thruster simulations. To capture the full kinetic behavior of ion thruster plumes, both the electrons and ions are treated as test particles. Simulation results are given of the NSTAR ion thruster under ground test and in space conditions. Numerical results are compared.

  19. Interaction between phase transformations and dislocations at the nanoscale. Part 2: Phase field simulation examples

    NASA Astrophysics Data System (ADS)

    Javanbakht, Mahdi; Levitas, Valery I.

    2015-09-01

    The complete system of phase field equations for coupled martensitic phase transformations (PTs), dislocation evolution, and mechanics at large strains is presented. Finite element method (FEM) is utilized to solve this system for two important problems. The first one is related to the simulation of shear strain-induced PT at the evolving dislocation pile-ups in a nanosized bicrystal. Plasticity plays a dual part in the interaction with PT. Dislocation pile-ups produce strong stress tensor concentrators that lead to barrierless martensite (M) nucleation. On the other hand, plasticity in the transforming grain relaxes these stress concentrators suppressing PT. The final stationary M morphology is governed by the local thermodynamic equilibrium, either at the interfaces or in terms of stresses averaged over the martensitic region or the entire grain. This is very surprising because of strong heterogeneity of stress fields and is in contrast to previous statements that phase equilibrium conditions do not enter the description of strain-induced PTs. The second problem is devoted to martensitic plate propagation through a bicrystal during temperature-induced PT. For elastic growth (without dislocations) and a large thermal driving force, a complex transformation path with plate branching and direct and reverse PTs is observed, which still ends with the same stationary nanostructure as for a smaller driving force and a traditional transformation path. Sharp grain boundary arrests plate growth at a relatively small driving force, exhibiting an athermal friction. For elastoplastic growth, the generation of dislocations produces athermal friction and arrests the plate below some critical driving force, leading to a morphological transition from plate to lath M. The width of the martensitic plate increases in comparison with elastic growth due to internal stress relaxation. Plate growth is accompanied by the nucleation of dislocations within M and remaining in M, the

  20. Simple 3-D stimulus for motion parallax and its simulation.

    PubMed

    Ono, Hiroshi; Chornenkyy, Yevgen; D'Amour, Sarah

    2013-01-01

    Simulation of a given stimulus situation should produce the same perception as the original. Rogers et al (2009 Perception 38 907-911) simulated Wheeler's (1982, PhD thesis, Rutgers University, NJ) motion parallax stimulus and obtained quite different perceptions. Wheeler's observers were unable to reliably report the correct direction of depth, whereas Rogers's were. With three experiments we explored the possible reasons for the discrepancy. Our results suggest that Rogers was able to see depth from the simulation partly due to his experience seeing depth with random dot surfaces.

  1. 3-D massively parallel impact simulations using PCTH

    SciTech Connect

    Fang, H.E.; Robinson, A.C.

    1992-12-31

    Simulations of hypervelocity impact problems are performed frequently by government laboratories and contractors for armor/anti-armor applications. These simulations need to deal with shock wave physics phenomena, large material deformation, motion of debris particles and complex geometries. As a result, memory and processing time requirements are large for detailed, three-dimensional calculations. The large massively parallel supercomputing systems of the future will provide the power necessary to greatly reduce simulation times currently required by shared-memory, vector supercomputers. This paper gives an introduction to PCTH, a next-generation shock wave physics code which is being built at Sandia National Laboratories for massively parallel supercomputers, and demonstrates that massively parallel hydrocodes, such as PCTH, can provide highly-detailed, three-dimensional simulations of armor/anti-armor systems.

  2. 3-D massively parallel impact simulations using PCTH

    SciTech Connect

    Fang, H.E.; Robinson, A.C.

    1992-01-01

    Simulations of hypervelocity impact problems are performed frequently by government laboratories and contractors for armor/anti-armor applications. These simulations need to deal with shock wave physics phenomena, large material deformation, motion of debris particles and complex geometries. As a result, memory and processing time requirements are large for detailed, three-dimensional calculations. The large massively parallel supercomputing systems of the future will provide the power necessary to greatly reduce simulation times currently required by shared-memory, vector supercomputers. This paper gives an introduction to PCTH, a next-generation shock wave physics code which is being built at Sandia National Laboratories for massively parallel supercomputers, and demonstrates that massively parallel hydrocodes, such as PCTH, can provide highly-detailed, three-dimensional simulations of armor/anti-armor systems.

  3. 3D Hydrodynamic Simulation of Classical Novae Explosions

    NASA Astrophysics Data System (ADS)

    Kendrick, Coleman J.

    2015-01-01

    This project investigates the formation and lifecycle of classical novae and determines how parameters such as: white dwarf mass, star mass and separation affect the evolution of the rotating binary system. These parameters affect the accretion rate, frequency of the nova explosions and light curves. Each particle in the simulation represents a volume of hydrogen gas and are initialized randomly in the outer shell of the companion star. The forces on each particle include: gravity, centrifugal, coriolis, friction, and Langevin. The friction and Langevin forces are used to model the viscosity and internal pressure of the gas. A velocity Verlet method with a one second time step is used to compute velocities and positions of the particles. A new particle recycling method was developed which was critical for computing an accurate and stable accretion rate and keeping the particle count reasonable. I used C++ and OpenCL to create my simulations and ran them on two Nvidia GTX580s. My simulations used up to 1 million particles and required up to 10 hours to complete. My simulation results for novae U Scorpii and DD Circinus are consistent with professional hydrodynamic simulations and observed experimental data (light curves and outburst frequencies). When the white dwarf mass is increased, the time between explosions decreases dramatically. My model was used to make the first prediction for the next outburst of nova DD Circinus. My simulations also show that the companion star blocks the expanding gas shell leading to an asymmetrical expanding shell.

  4. Modeling Airport Ground Operations using Discrete Event Simulation (DES) and X3D Visualization

    DTIC Science & Technology

    2008-03-01

    studies, because it offers a number of features as for example: 12 1. Open source 2. Character animation support (CAL3D) 3. Game engine with...Simulation, DES, Simkit, Diskit, Viskit, Savage, XML, Distributed Interactive Simulation, DIS, Blender , X3D Edit 16. PRICE CODE 17. SECURITY...10 5. Blender Authoring Tool

  5. Enhancing Pre-Service Teachers' Awareness to Pupils' Test-Anxiety with 3D Immersive Simulation

    ERIC Educational Resources Information Center

    Passig, David; Moshe, Ronit

    2008-01-01

    This study investigated whether participating in a 3D immersive virtual reality world simulating the experience of test-anxiety would affect preservice teachers' awareness to the phenomenon. Ninety subjects participated in this study, and were divided into three groups. The experimental group experienced a 3D immersive simulation which made…

  6. Tensor3D: A computer graphics program to simulate 3D real-time deformation and visualization of geometric bodies

    NASA Astrophysics Data System (ADS)

    Pallozzi Lavorante, Luca; Dirk Ebert, Hans

    2008-07-01

    Tensor3D is a geometric modeling program with the capacity to simulate and visualize in real-time the deformation, specified through a tensor matrix and applied to triangulated models representing geological bodies. 3D visualization allows the study of deformational processes that are traditionally conducted in 2D, such as simple and pure shears. Besides geometric objects that are immediately available in the program window, the program can read other models from disk, thus being able to import objects created with different open-source or proprietary programs. A strain ellipsoid and a bounding box are simultaneously shown and instantly deformed with the main object. The principal axes of strain are visualized as well to provide graphical information about the orientation of the tensor's normal components. The deformed models can also be saved, retrieved later and deformed again, in order to study different steps of progressive strain, or to make this data available to other programs. The shape of stress ellipsoids and the corresponding Mohr circles defined by any stress tensor can also be represented. The application was written using the Visualization ToolKit, a powerful scientific visualization library in the public domain. This development choice, allied to the use of the Tcl/Tk programming language, which is independent on the host computational platform, makes the program a useful tool for the study of geometric deformations directly in three dimensions in teaching as well as research activities.

  7. Phase-field simulations of crystal growth in a two-dimensional cavity flow

    NASA Astrophysics Data System (ADS)

    Lee, Seunggyu; Li, Yibao; Shin, Jaemin; Kim, Junseok

    2017-07-01

    In this paper, we consider a phase-field model for dendritic growth in a two-dimensional cavity flow and propose a computationally efficient numerical method for solving the model. The crystal is fixed in the space and cannot be convected in most of the previous studies, instead the supercooled melt flows around the crystal, which is hard to be realized in the real world experimental setting. Applying advection to the crystal equation, we have problems such as deformation of crystal shape and ambiguity of the crystal orientation for the anisotropy. To resolve these difficulties, we present a phase-field method by using a moving overset grid for the dendritic growth in a cavity flow. Numerical results show that the proposed method can predict the crystal growth under flow.

  8. 3D MHD Simulations of Stratified Accretion Disks

    NASA Astrophysics Data System (ADS)

    Stone, James M.; Hawley, John F.; Gammie, Charles

    1993-12-01

    We investigate the growth and nonlinear saturation of a powerful local shear instability in weakly magnetised accretion disks using three dimensional magnetohydrodynamic (MHD) simulations. To achieve a sufficiently high numerical resolution, we use a local approximation for the disk and carry out the simulations on massively parallel supercomputers. Here we investigate the linear growth and nonlinear saturation of the instability in a vertically stratified, intially isothermal disk. A variety of initial field configurations and strengths are considered. The simulations allow a quantitative analysis of the role of bouyancy as a saturation mechanism, and possible dynamo action in the disk. This work is partially supported by NSF grant PHY-9018251 and NASA grants NAGW-1510 and NAGW-2376. Code development is supported by the NASA HPCC Initiative through grant NAG5-2202. Computations were carried out on the CM200 system of the National Center for Supercomputing Applications.

  9. SIERRA - A 3-D device simulator for reliability modeling

    NASA Astrophysics Data System (ADS)

    Chern, Jue-Hsien; Arledge, Lawrence A., Jr.; Yang, Ping; Maeda, John T.

    1989-05-01

    SIERRA is a three-dimensional general-purpose semiconductor-device simulation program which serves as a foundation for investigating integrated-circuit (IC) device and reliability issues. This program solves the Poisson and continuity equations in silicon under dc, transient, and small-signal conditions. Executing on a vector/parallel minisupercomputer, SIERRA utilizes a matrix solver which uses an incomplete LU (ILU) preconditioned conjugate gradient square (CGS, BCG) method. The ILU-CGS method provides a good compromise between memory size and convergence rate. The authors have observed a 5x to 7x speedup over standard direct methods in simulations of transient problems containing highly coupled Poisson and continuity equations such as those found in reliability-oriented simulations. The application of SIERRA to parasitic CMOS latchup and dynamic random-access memory single-event-upset studies is described.

  10. A Phase Field Model of Deformation Twinning: Nonlinear Theory and Numerical Simulations

    DTIC Science & Technology

    2011-03-01

    numerical solutions require advanced computational methods such as level sets [18] for resolution of surfaces of discontinuity. Continuum phase field...conditions (28). Strong forms derived in Sections 2.4 and 3.3 are not needed by the numerical algorithms . Addressed in what follows are the following kinds of...inclusions in Fig. 3) because the algorithm seeks energy minima rather than saddle points. Recall that the total free energy is a non-convex functional

  11. Phase-field simulations of the interaction between a grain boundary and an evolving second-phase particle

    NASA Astrophysics Data System (ADS)

    Chang, Kunok; Moelans, Nele

    2015-04-01

    We performed phase-field simulations to analyse the interaction of a migrating grain boundary with an evolving second-phase particle. It is found that depending on the difference between the interfacial energies of the particle-matrix interface for the two grain orientations involved and the driving force for grain boundary movement, particles with a particle size well above the critical limit can dissolve due to passage of the boundary.

  12. 3D Simulations of methane convective storms on Titan's atmosphere

    NASA Astrophysics Data System (ADS)

    Hueso, R.; Sánchez-Lavega, A.

    2005-08-01

    The arrival of the Cassini/Huygens mission to Titan has opened an unprecedented opportunity to study the atmosphere of this satellite. Under the pressure-temperature conditions on Titan, methane, a large atmospheric component amounting perhaps to a 3-5% of the atmosphere, is close to its triple point, potentially playing a similar role as water on Earth. The Huygens probe has shown a terrain shaped by erosion of probably liquid origin, suggestive of past rain. On the other hand, Voyager IRIS spectroscopic observations of Titan imply a saturated atmosphere of methane (amounting perhaps to 150 covered by methane clouds, if we think on Earth meteorology. However, observations from Earth and Cassini have shown that clouds are localized, transient and fast evolving, in particular in the South Pole (currently in its summer season). This might imply a lack of widespread presence on Titan of nuclei where methane could initiate condensation and particle growth with subsequent precipitation. We investigate different scenarios of moist convective storms on Titan using a complete 3D atmospheric model that incorporates a full microphysics treatment required to study cloud formation processes under a saturated atmosphere with low concentration of condensation nuclei. We study local convective development under a variety of atmospheric conditions: sub-saturation, super-saturation, abundances of condensation nuclei fall, condensation nuclei lifted from the ground or gently falling from the stratosphere. We show that under the appropriate circumstances, precipitation rates comparable to typical tropical storms on Earth can be found. Acknowledgements: This work has been funded by Spanish MCYT PNAYA2003-03216, fondos FEDER and Grupos UPV 15946/2004. R. Hueso acknowledges a post-doc fellowship from Gobierno Vasco.

  13. 3-D Spreadsheet Simulation of a Modern Particle Detector

    ERIC Educational Resources Information Center

    Scott, Alan J.

    2004-01-01

    A spreadsheet simulation of a modern particle detector has been developed and can be readily used as an instructional tool in the physics classroom. The spreadsheet creates a three-dimensional model that can be rotated and helical trajectories can be highlighted. An associated student worksheet is also presented.

  14. 3-D Spreadsheet Simulation of a Modern Particle Detector

    ERIC Educational Resources Information Center

    Scott, Alan J.

    2004-01-01

    A spreadsheet simulation of a modern particle detector has been developed and can be readily used as an instructional tool in the physics classroom. The spreadsheet creates a three-dimensional model that can be rotated and helical trajectories can be highlighted. An associated student worksheet is also presented.

  15. 3-D MHD disk wind simulations of protostellar jets

    NASA Astrophysics Data System (ADS)

    Staff, Jan E.; Koning, Nico; Ouyed, Rachid; Tanaka, Kei; Tan, Jonathan C.

    2016-01-01

    We present the results of large scale, three-dimensional magnetohydrodynamics simulations of disk winds for different initial magnetic field configurations. The jets are followed from the source to distances, which are resolvable by HST and ALMA observations. Our simulations show that jets are heated along their length by many shocks. The mass of the protostar is a free parameter that can be inserted in the post processing of the data, and we apply the simulations to both low mass and high mass protostars. For the latter we also compute the expected diagnostics when the outflow is photoionized by the protostar. We compute the emission lines that are produced, and find excellent agreement with observations. For a one solar mass protostar, we find the jet width to be between 20 and 30 au while the maximum velocities perpendicular to the jet are found to be 100 km s-1. The initially less open magnetic field configuration simulations result in a wider, two-component jet; a cylindrically shaped outer jet surrounding a narrow and much faster, inner jet. For the initially most open magnetic field configuration the kink mode creates a narrow corkscrew-like jet without a clear Keplerian rotation profile and even regions where we observe rotation opposite to the disk (counter-rotating). This is not seen in the less open field configurations.

  16. [Accuracy of morphological simulation for orthognatic surgery. Assessment of a 3D image fusion software.

    PubMed

    Terzic, A; Schouman, T; Scolozzi, P

    2013-08-06

    The CT/CBCT data allows for 3D reconstruction of skeletal and untextured soft tissue volume. 3D stereophotogrammetry technology has strongly improved the quality of facial soft tissue surface texture. The combination of these two technologies allows for an accurate and complete reconstruction. The 3D virtual head may be used for orthognatic surgical planning, virtual surgery, and morphological simulation obtained with a software dedicated to the fusion of 3D photogrammetric and radiological images. The imaging material include: a multi-slice CT scan or broad field CBCT scan, a 3D photogrammetric camera. The operative image processing protocol includes the following steps: 1) pre- and postoperative CT/CBCT scan and 3D photogrammetric image acquisition; 2) 3D image segmentation and fusion of untextured CT/CBCT skin with the preoperative textured facial soft tissue surface of the 3D photogrammetric scan; 3) image fusion of the pre- and postoperative CT/CBCT data set virtual osteotomies, and 3D photogrammetric soft tissue virtual simulation; 4) fusion of virtual simulated 3D photogrammetric and real postoperative images, and assessment of accuracy using a color-coded scale to measure the differences between the two surfaces. Copyright © 2013. Published by Elsevier Masson SAS.

  17. Simulating 3D Spacecraft Constellations for Low Frequency Radio Imaging

    NASA Astrophysics Data System (ADS)

    Hegedus, A. M.; Amiri, N.; Lazio, J.; Belov, K.; Kasper, J. C.

    2016-12-01

    Constellations of small spacecraft could be used to realize a low-frequency phased array for either heliophysics or astrophysics observations. However, there are issues that arise with an orbiting array that do not occur on the ground, thus rendering much of the existing radio astronomy software inadequate for data analysis and simulation. In this work we address these issues and consider the performance of two constellation concepts. The first is a 32-spacecraft constellation for astrophysical observations, and the second is a 5-element concept for pointing to the location of radio emission from coronal mass ejections (CMEs). For the first, we fill the software gap by extending the APSYNSIM software to simulate the aperture synthesis for a radio interferometer in orbit. This involves using the dynamic baselines from the relative motion of the individual spacecraft as well as the capability to add galactic noise. The ability to simulate phase errors corresponding to positional uncertainty of the antennas was also added. The upgraded software was then used to model the imaging of a 32 spacecraft constellation that would orbit the moon to image radio galaxies like Cygnus A at .3-30 MHz. Animated images showing the improvement of the dirty image as the orbits progressed were made. RMSE plots that show how well the dirty image matches the input image as a function of integration time were made. For the second concept we performed radio interferometric simulations of the Sun Radio Interferometer Space Experiment (SunRISE) using the Common Astronomy Software Applications (CASA) package. SunRISE is a five spacecraft phased array that would orbit Earth to localize the low frequency radio emission from CMEs. This involved simulating the array in CASA, creating truth images for the CMEs over the entire frequency band of SunRISE, and observing them with the simulated array to see how well it could localize the true position of the CME. The results of our analysis show that we

  18. 3D simulation of drop impact on a fiber

    NASA Astrophysics Data System (ADS)

    Wang, Sheng; Desjardins, Olivier

    2016-11-01

    In this talk, an efficient numerical approach to simulate liquid-gas flows with moving contact lines is presented, then employed to investigate drop impact on a horizontal fiber. This approach combines a conservative level set method to capture the interface, an immersed boundary method to represent the curved boundary, and a curvature boundary method to treat the contact line. Simulations of drop-fiber impact are compared with experimental results with perticular focus on two key aspects: the critical velocity for a drop to be captured by a fiber, and the topology of the impacting drop. Numerical results show good agreement with experiments in predicting the critical velocity. A regime map of drop topology based on the Weber number and drop-to-fiber diameter ratio is compared to the experimental results.

  19. ROAR: A 3-D tethered rocket simulation code

    NASA Astrophysics Data System (ADS)

    York, A. R., II; Ludwigsen, J. S.

    1992-04-01

    A high-velocity impact testing technique, utilizing a tethered rocket, is being developed at Sandia National Laboratories. The technique involves tethering a rocket assembly to a pivot location and flying it in a semicircular trajectory to deliver the rocket and payload to an impact target location. Integral to developing this testing technique is the parallel development of accurate simulation models. An operational computer code, called ROAR (Rocket-on-a-Rope), has been developed to simulate the three-dimensional transient dynamic behavior of the tether and motor/payload assembly. This report presents a discussion of the parameters modeled, the governing set of equations, the through-time integration scheme, and the input required to set up a model. Also included is a sample problem and a comparison with experimental results.

  20. ROAR: A 3-D tethered rocket simulation code

    SciTech Connect

    York, A.R. II; Ludwigsen, J.S.

    1992-04-01

    A high-velocity impact testing technique, utilizing a tethered rocket, is being developed at Sandia National Laboratories. The technique involves tethering a rocket assembly to a pivot location and flying it in a semicircular trajectory to deliver the rocket and payload to an impact target location. Integral to developing this testing technique is the parallel development of accurate simulation models. An operational computer code, called ROAR (Rocket-on-a-Rope), has been developed to simulate the three-dimensional transient dynamic behavior of the tether and motor/payload assembly. This report presents a discussion of the parameters modeled, the governing set of equations, the through-time integration scheme, and the input required to set up a model. Also included is a sample problem and a comparison with experimental results.

  1. 3D Continuum-Particle Simulations for Multiscale Hydrodynamics

    NASA Astrophysics Data System (ADS)

    Wijesinghe, Sanith; Hornung, Richard; Garcia, Alejandro; Hadjiconstantinou, Nicolas

    2001-06-01

    An adaptive mesh and algorithmic refinement (AMAR) scheme to model multi-scale, continuum-particle hydrodynamic flows is presented. AMAR ensures the particle description is applied exclusively in regions with high flow gradients and discontinous material interfaces, i.e. regions where the continuum flow assumptions are typically invalid. Direct Simulation Monte Carlo (DSMC) is used to model the particle regions on the finest grid of the adaptive hierarchy. The continuum flow is modelled using the compressible flow Euler equations and is solved using a second order Godunov scheme. Coupling is achieved by conservation of fluxes across the continuum-particle grid boundaries. The AMAR data structures are supported by a C++ object oriented framework (Structured Adaptive Mesh Refinement Application Infrastructure - SAMRAI) which allows for efficient parallel implementation. The scheme also extends to simulations of gas mixtures. Results for test cases are compared with theory and experiment.

  2. Advanced 3D Photocathode Modeling and Simulations Final Report

    SciTech Connect

    Dimitre A Dimitrov; David L Bruhwiler

    2005-06-06

    High brightness electron beams required by the proposed Next Linear Collider demand strong advances in photocathode electron gun performance. Significant improvement in the production of such beams with rf photocathode electron guns is hampered by the lack high-fidelity simulations. The critical missing piece in existing gun codes is a physics-based, detailed treatment of the very complex and highly nonlinear photoemission process.

  3. Numerical simulations of 3D compressible vortex ring

    NASA Astrophysics Data System (ADS)

    Dora, C. L.; De, A.; Das, D.

    2017-07-01

    In this paper, the evolution and instability of compressible vortex rings at the open end of shock tube are investigated. Three-dimensional Navier-stokes simulations are performed to reveal the instability of circular-compressible vortex rings at different shock Mach numbers. Three shock Mach numbers Ms=1.26, 1.5 and 1.61 each corresponding to subsonic, moderately under-expanded, and highly under-expanded jet regimes, respectively are considered for simulations. It is observed that, in all the cases, the initial stable vortex ring becomes unstable to azimuthal disturbances. The azimuthal waves are seen to develop around the circumference of the vortex core and amplify with time, similar to incompressible vortex rings. At Ms=1.61, the results indicate that a counter-rotating vortex ring forms ahead of the primary vortex ring due to the roll-up of the slipstream vortices. With the presence of counter-rotating vortex ring, the primary vortex ring is severely stretched and the azimuthal waves are seen to be amplified. Furthermore, a preliminary analysis on the number of waves (n) formed around the circumference of the vortex ring is presented. The results show that incompressible instability analysis under-predicts the value of n. However, by incorporating the compressibility correction, the value of n closely matches with the present simulation.

  4. RoboCup 3D Soccer Simulation Server: A Progressing Testbed for AI Researchers

    NASA Astrophysics Data System (ADS)

    Darab, Mohammad Ali Darvish; Ebrahimi, Mosalam

    RoboCup 3D Soccer Simulation is a growing domain that makes a wide variety of AI and Multi-Agent researches possible. The RoboCup 3D Soccer Simulation Server is a Multi-Agent environment that supports 22 independent agents to play a soccer match within a real-time and complex environment. Many researchers from all over the world have been using this simulator to pursue their researches in a wide variety of areas such as multiagent learning, cooperative actions and multiagent planning. This paper illustrates the current organization of RoboCup 3D Soccer Simulation Server.

  5. [3D Virtual Reality Laparoscopic Simulation in Surgical Education - Results of a Pilot Study].

    PubMed

    Kneist, W; Huber, T; Paschold, M; Lang, H

    2016-06-01

    The use of three-dimensional imaging in laparoscopy is a growing issue and has led to 3D systems in laparoscopic simulation. Studies on box trainers have shown differing results concerning the benefit of 3D imaging. There are currently no studies analysing 3D imaging in virtual reality laparoscopy (VRL). Five surgical fellows, 10 surgical residents and 29 undergraduate medical students performed abstract and procedural tasks on a VRL simulator using conventional 2D and 3D imaging in a randomised order. No significant differences between the two imaging systems were shown for students or medical professionals. Participants who preferred three-dimensional imaging showed significantly better results in 2D as wells as in 3D imaging. First results on three-dimensional imaging on box trainers showed different results. Some studies resulted in an advantage of 3D imaging for laparoscopic novices. This study did not confirm the superiority of 3D imaging over conventional 2D imaging in a VRL simulator. In the present study on 3D imaging on a VRL simulator there was no significant advantage for 3D imaging compared to conventional 2D imaging. Georg Thieme Verlag KG Stuttgart · New York.

  6. 3D vesicle dynamics simulations with a linearly triangulated surface

    NASA Astrophysics Data System (ADS)

    Boedec, G.; Leonetti, M.; Jaeger, M.

    2011-02-01

    Simulations of biomembranes have gained an increasing interest in the past years. Specificities of these membranes propose new challenges for the numerics. In particular, vesicle dynamics are governed by bending forces as well as a surface incompressibility constraint. A method to compute the bending force density resultant onto piecewise linearly triangulated surface meshes is described. This method is coupled with a boundary element method solver for inner and outer fluids, to compute vesicle dynamics under external flows. The surface incompressibility constraint is satisfied by the construction of a projection operator.

  7. Photorealistic 3D omni-directional stereo simulator

    NASA Astrophysics Data System (ADS)

    Reiners, Dirk; Cruz-Neira, Carolina; Neumann, Carsten

    2015-03-01

    While a lot of areas in VR have made significant advances, visual rendering in VR is often not quite keeping up with the state of the art. There are many reasons for this, but one way to alleviate some of the issues is by using ray tracing instead of rasterization for image generation. Contrary to popular belief, ray tracing is a realistic, competitive technology nowadays. This paper looks at the pros and cons of using ray tracing and demonstrates the feasibility of employing it using the example of a helicopter flight simulator image generator.

  8. Numerical grid generation in 3D Euler-flow simulation

    NASA Astrophysics Data System (ADS)

    Boerstoel, J. W.

    1988-04-01

    The technical problems with grid generation are analyzed and an overview of proposed solutions is given. The usefulness of grid-generation techniques, for the numerical simulation of Euler (and Navier-Stokes) flows around complex three-dimensional aerodynamic configurations, is illustrated. It is shown that the core of the grid-generation problem is a topology problem. The following remarks are sketched: grid generation is a subtask in a numerical simulation of a flow in industrial and research environments; the design requirements of a grid generation concern the geometrical imput, the desired grid as output, the technical means to control grid resolution and quality and turnaround time performance; the construction of a blocked grid can be subdivided in a block-decomposition task and a grid-point distribution task. A technique for using connectivity relations to define conventions about local coordinate systems in edges, faces and blocks is presented. Experiences are reported and an example concerning a 96-blocked grid around a complex aerodynamic configuration is given. Concepts for improvements in the presented technique are discussed.

  9. Linking continuum mechanics and 3D discrete dislocation simulations

    SciTech Connect

    El-Azab, A. A.; Fivel, M.

    1998-10-18

    A technique is developed for linking the methods of discrete dislocation dynamics simulation and finite element to treat elasto-plasticity problems. The overall formulation views the plastically deforming crystal as an elastic crystal with continuously changing dislocation microstructure which is tracked by the numerical dynamics simulation. The FEM code needed in this regard is based on linear elasticity only. This formulation presented here is focused on a continuous updating of the outer shape of the crystal, for possible regeneration of the FEM mesh, and adjustment of the surface geometry, in particular the surface normal. The method is expected to be potentially applicable to the nano- indentation experiments, where the zone around the indenter-crystal contact undergoes significant permanent deformation, the rigorous determination of which is very important to the calculation of the indentation print area and in turn, the surface hardness. Furthermore, the technique is expected to account for the plastic history of the surface displacement under the indenter. Other potential applications are mentioned in the text.

  10. Chemical Oxygen-Iodine Laser Device Simulation Using the 3D, Unsteady Navier-Stokes Equations

    DTIC Science & Technology

    2007-06-01

    overall rate of dimensional ( 3D ) GASP model for the COIL flowfield dissociation of I2. was executed in time accurate mode utilizing lst-order The gas... 3D , Unsteady Navier-Stokes Equations DISTRIBUTION: Approved for public release, distribution unlimited This paper is part of the following report...ADP023803 UNCLASSIFIED Chemical Oxygen-Iodine Laser Device Simulation Using the 3D , Unsteady Navier- Stokes Equations Timothy J. Madden US Air Force

  11. Dynamic 3D simulations of earthquakes on en echelon faults

    USGS Publications Warehouse

    Harris, R.A.; Day, S.M.

    1999-01-01

    One of the mysteries of earthquake mechanics is why earthquakes stop. This process determines the difference between small and devastating ruptures. One possibility is that fault geometry controls earthquake size. We test this hypothesis using a numerical algorithm that simulates spontaneous rupture propagation in a three-dimensional medium and apply our knowledge to two California fault zones. We find that the size difference between the 1934 and 1966 Parkfield, California, earthquakes may be the product of a stepover at the southern end of the 1934 earthquake and show how the 1992 Landers, California, earthquake followed physically reasonable expectations when it jumped across en echelon faults to become a large event. If there are no linking structures, such as transfer faults, then strike-slip earthquakes are unlikely to propagate through stepovers >5 km wide. Copyright 1999 by the American Geophysical Union.

  12. 3D Simulation and Validation of Tube Piercing Process

    NASA Astrophysics Data System (ADS)

    Ceretti, Elisabetta; Giardini, Claudio; Attanasio, Aldo

    2007-05-01

    In many cases the development of analytical or simulative models of actual production processes can help in improving the product quality furnishing defect-free parts. In particular, when tube piercing processes are referring to, the main problem that can arise is the low quality of the internal tube surface. This type of defect cannot be eliminated during the successive production phases so compromising the final part quality. It is possible to overcome this problem by placing in the correct position the internal plug which defines the internal tube diameter. This position greatly depends on where the tube material begins to break due the acting internal stresses. This phenomenon is called Mannesmann effect. The farther the plug from the Mannesmann cone formation, the higher the oxidation of the internal tube surface. On the contrary the closer the plug, the higher the wear of the plug. In actual practice an on-line control of the position of the Mannesmann cone is impossible to be implemented. In the past, the Authors have developed a model to help the production line technicians in determining where to place the plug. This model was a two dimensional representation of the actual phenomenon, and it has already been proved to correctly represent the actual tube behavior since it was validated by comparing its results with experiments. Using the results of a wide simulation campaign, a neural network was trained and now it is used as an on-line plug position definition support. In the present paper the results obtained using a fully three dimensional model of the process are reported. This model will allow to confirm some simplifying assumption made in the 2D model definition and to study the tube behavior when it reaches and moves on the plug, too. Some comparisons with practical evidences are reported.

  13. PHASE-FIELD SIMULATION OF IRRADIATED METALS: PART II: GAS BUBBLE KINETICS

    SciTech Connect

    Paul C Millett; Anter El-Azab

    2011-01-01

    We present a phase-field model for inert gas bubble formation and evolution in irradiated metals. The model evolves vacancy, self-interstitial, and fission gas atoms through a coupled set of Cahn-Hilliard and Allen-Cahn equations, capturing the processes of defect generation, recombination, annihilation at GB sinks, as well as intragranular and intergranular bubble nucleation and growth in polycrystalline microstructures. Illustrative results are presented that characterize bubble growth and shrinkage, as well as the bubble density, size and nucleation rate as a function of varying irradiation conditions. Finally, intergranular bubble characteristics such as shape, pinning energy on GB motion, and bubble density are investigated.

  14. Development of 3D beam-beam simulation for the Tevatron

    SciTech Connect

    Stern, E.; Amundson, J.; Spentzouris, P.; Valishev, A.; Qiang, J.; Ryne, R.; /LBL, Berkeley

    2007-06-01

    We present status of development of a 3D Beam-Beam simulation code for simulating the Fermilab Tevatron collider. The essential features of the code are 3D particle-in-cell Poisson solver for calculating the Beam-Beam electromagnetic interactions with additional modules for linear optics, machine impedance and chromaticity, and multiple bunch tracking. The simulations match synchrobetatron oscillations measured at the VEPP-2M collider. The impedance calculations show beam instability development consistent with analytic expressions.

  15. A Quantitative Phase-Field Simulation of Soft-Impingement in Austenite to Ferrite Transformation with Mixed-Mode

    NASA Astrophysics Data System (ADS)

    Bhattacharya, Avisor; Upadhyay, C. S.; Sangal, S.

    2017-10-01

    The present work simulates the transformation of austenite to ferrite with mixed-mode in a simplified austenitic grain geometry. The quantitative phase-field model, developed on the basis of non-local equilibrium at the interface, simulates the transformation. The present work reveals that the soft-impingement takes place much earlier than has been so far considered. The accumulation of carbon in and around the meeting point of the diffusion layers is not continuous, and a detailed mechanism of soft-impingement is presented here. The growth of ferrite under mixed-mode of transformation is analyzed and found to be consistent with the theory.

  16. Detailed 3D Simulation of the GEM-based detector

    NASA Astrophysics Data System (ADS)

    Bhattacharya, P.; Biswas, S.; Mohanty, B.; Majumdar, N.; Mukhopadhyay, S.

    2016-10-01

    The operation of Micro Pattern Gaseous Detectors (MPGDs) has often suffered from effects such as distortion of the electric field due to space charge, despite their widespread use in particle-physics and nuclear-physics experiments, astro-particle research, medical imaging, material science etc. To keep distortions due to space-charge at a manageable level, a lower ion feedback is required while maintaining substantial detector gain and good resolution. Thus, a proper optimization of the detector geometry, field configuration and gas mixtures are required to have a higher electron transparency and lower ion backflow. In our work, Garfield simulation framework has been adopted as a tool to evaluate the fundamental features of Gas Electron Multiplier (GEM). Our study begins with the computation of electrostatic field and its variation with different geometrical and electrical parameters using the neBEM toolkit. Different efficient algorithms have been implemented to increase the computational efficiency of the field solver. Finally, ion backflow and electron transparency of single and quadruple GEMs with different geometry and field configurations suitable for the ALICE-TPC, have been studied.

  17. Particle image velocimetry on simulated 3D ultrafast ultrasound from pediatric matrix TEE transducers

    NASA Astrophysics Data System (ADS)

    Voorneveld, J. D.; Bera, D.; van der Steen, A. F. W.; de Jong, N.; Bosch, J. G.

    2017-03-01

    Ultrafast 3D transesophageal echocardiographic (TEE) imaging, combined with 3D echo particle image velocimetry (ePIV), would be ideal for tracking the complex blood flow patterns in the heart. We are developing a miniature pediatric matrix TEE transducer that employs micro-beamforming (μBF) and allows high framerate in 3D. In this paper, we assess the feasibility of 3D ePIV with a high frame rate, small aperture transducer and the influence of the micro-beamforming technique. We compare the results of 3D ePIV on simulated images using the μBF transducer and an idealized, fully sampled (FS) matrix transducer. For the two transducers, we have simulated high-framerate imaging of an 8.4mm diameter artery having a known 4D velocity field. The simulations were performed in FieldII. 1000 3D volumes, at a rate of 1000 volumes/sec, were created using a single diverging transmission per volume. The error in the 3D velocity estimation was measured by comparing the ePIV results of both transducers to the ground truth. The results on the simulated volumes show that ePIV can estimate the 4D velocity field of the arterial phantom using these small-aperture transducers suitable for pediatric 3D TEE. The μBF transducer (RMSE 44.0%) achieved comparable ePIV accuracy to that of the FS transducer (RMSE 42.6%).

  18. The Virtual Radiopharmacy Laboratory: A 3-D Simulation for Distance Learning

    ERIC Educational Resources Information Center

    Alexiou, Antonios; Bouras, Christos; Giannaka, Eri; Kapoulas, Vaggelis; Nani, Maria; Tsiatsos, Thrasivoulos

    2004-01-01

    This article presents Virtual Radiopharmacy Laboratory (VR LAB), a virtual laboratory accessible through the Internet. VR LAB is designed and implemented in the framework of the VirRAD European project. This laboratory represents a 3D simulation of a radio-pharmacy laboratory, where learners, represented by 3D avatars, can experiment on…

  19. The Virtual Radiopharmacy Laboratory: A 3-D Simulation for Distance Learning

    ERIC Educational Resources Information Center

    Alexiou, Antonios; Bouras, Christos; Giannaka, Eri; Kapoulas, Vaggelis; Nani, Maria; Tsiatsos, Thrasivoulos

    2004-01-01

    This article presents Virtual Radiopharmacy Laboratory (VR LAB), a virtual laboratory accessible through the Internet. VR LAB is designed and implemented in the framework of the VirRAD European project. This laboratory represents a 3D simulation of a radio-pharmacy laboratory, where learners, represented by 3D avatars, can experiment on…

  20. Computer-assisted three-dimensional surgical planning and simulation: 3D virtual osteotomy.

    PubMed

    Xia, J; Ip, H H; Samman, N; Wang, D; Kot, C S; Yeung, R W; Tideman, H

    2000-02-01

    A computer-assisted three-dimensional virtual osteotomy system for orthognathic surgery (CAVOS) is presented. The virtual reality workbench is used for surgical planning. The surgeon immerses in a virtual reality environment with stereo eyewear, holds a virtual "scalpel" (3D Mouse) and operates on a "real" patient (3D visualization) to obtain pre-surgical prediction (3D bony segment movements). Virtual surgery on a computer-generated 3D head model is simulated and can be visualized from any arbitrary viewing point in a personal computer system.

  1. Recent advances in 3D computed tomography techniques for simulation and navigation in hepatobiliary pancreatic surgery.

    PubMed

    Uchida, Masafumi

    2014-04-01

    A few years ago it could take several hours to complete a 3D image using a 3D workstation. Thanks to advances in computer science, obtaining results of interest now requires only a few minutes. Many recent 3D workstations or multimedia computers are equipped with onboard 3D virtual patient modeling software, which enables patient-specific preoperative assessment and virtual planning, navigation, and tool positioning. Although medical 3D imaging can now be conducted using various modalities, including computed tomography (CT), magnetic resonance imaging (MRI), positron emission tomography (PET), and ultrasonography (US) among others, the highest quality images are obtained using CT data, and CT images are now the most commonly used source of data for 3D simulation and navigation image. If the 2D source image is bad, no amount of 3D image manipulation in software will provide a quality 3D image. In this exhibition, the recent advances in CT imaging technique and 3D visualization of the hepatobiliary and pancreatic abnormalities are featured, including scan and image reconstruction technique, contrast-enhanced techniques, new application of advanced CT scan techniques, and new virtual reality simulation and navigation imaging.

  2. Computer simulations of phase field drops on super-hydrophobic surfaces

    NASA Astrophysics Data System (ADS)

    Fedeli, Livio

    2017-09-01

    We present a novel quasi-Newton continuation procedure that efficiently solves the system of nonlinear equations arising from the discretization of a phase field model for wetting phenomena. We perform a comparative numerical analysis that shows the improved speed of convergence gained with respect to other numerical schemes. Moreover, we discuss the conditions that, on a theoretical level, guarantee the convergence of this method. At each iterative step, a suitable continuation procedure develops and passes to the nonlinear solver an accurate initial guess. Discretization performs through cell-centered finite differences. The resulting system of equations is solved on a composite grid that uses dynamic mesh refinement and multi-grid techniques. The final code achieves three-dimensional, realistic computer experiments comparable to those produced in laboratory settings. This code offers not only new insights into the phenomenology of super-hydrophobicity, but also serves as a reliable predictive tool for the study of hydrophobic surfaces.

  3. Three-dimensional Phase-field Simulation of Domain Structures in Ferroelectric Islands

    SciTech Connect

    Zhang , J.X.; Wu, R.; Choudhury, S.; Li, Yulan; Hu, Shenyang Y.; Chen , L.Q.

    2008-03-24

    A three-dimensional phase-field model was developed for studying the domain structures and their evolution in ferroelectric islands attached onto a substrate. It simultaneously takes into account the long-range interactions such as electric and elastic interactions, substrate constraint, as well as the stress relaxation caused by the surfaces of an island. As an example, we studied the domain structures of PbZr0.2Ti0.8O3 islands. It was demonstrated that the domain structures of ferroelectric islands could be dramatically different from those of continuous thin films due to the relief of substrate constraint. The stress distribution inside islands is highly dependent on the aspect ratio, i.e., lateral dimension over island thickness, which provides us a new way for engineering the domain structures of ferroelectric materials. The effect of electrostatic energy on the domain structures of ferroelectric islands was also discussed.

  4. Computer-assisted three-dimensional surgical planning and simulation: 3D color facial model generation.

    PubMed

    Xia, J; Wang, D; Samman, N; Yeung, R W; Tideman, H

    2000-02-01

    A scheme for texture mapping a 3D individualized color photo-realistic facial model from real color portraits and CT data is described. First, 3D CT images including both soft and hard tissues should be reconstructed from sequential CT slices, using a surface rendering technique. Facial features are extracted from 3D soft tissue. A generic mesh is individualized by correspondence matching and interpolation from those feature vertices. Three digitized color portraits with the "third" dimension from reconstructed soft tissue are blended and texture-mapped onto the 3D head model (mesh). A color simulated human head generated from frontal, right and left real color portraits can be viewed from an arbitrary angle in an inexpensive and user-friendly conventional personal computer. This scheme is the basic procedure in 3D computer-assisted simulation surgery.

  5. 3D simulations of multipacting in the 56 MHz SRF cavity

    SciTech Connect

    Wu Q.; Belomestnykh, S.; Ge, L.; Ko, K.; Li, Z.; Ng, C.; Xiao, L.

    2012-05-20

    The 56 MHz SRF Quarter-Wave Resonator (QWR) is designed for RHIC as a storage cavity to improve the collider performance. 2D multipacting simulation has been done for the cavity alone. Ripples were added to the outer body of the cavity for multipacting suppression based on the simulation findings. During operation, there will be four higher order mode (HOM) couplers. All of these components will be exposed to high RF fields. In this paper we compare 2D and 3D codes simulation results for multipacting in the cavity. We also report 3D simulation results for multipacting simulation at the couplers.

  6. Representativeness of 2D models to simulate 3D unstable variable density flow in porous media

    NASA Astrophysics Data System (ADS)

    Knorr, Bastian; Xie, Yueqing; Stumpp, Christine; Maloszewski, Piotr; Simmons, Craig T.

    2016-11-01

    Variable density flow in porous media has been studied primarily using numerical models because it is a semi-chaotic and transient process. Most of these studies have been 2D, owing to the computational restrictions on 3D simulations, and the ability to observe variable density flow in 2D experimentation. However, it is recognised that variable density flow is a three-dimensional process. A 3D system may cause weaker variable density flow than a 2D system due to stronger dispersion, but may also result in bigger fingers and hence stronger variable density flow because of more space for fingers to coalesce. This study aimed to determine the representativeness of 2D modelling to simulate 3D variable density flow. 3D homogeneous sand column experiments were conducted at three different water flow velocities with three different bromide tracer solutions mixed with methanol resulting in different density ratios. Both 2D axisymmetric and 3D numerical simulations were performed to reproduce experimental data. Experimental results showed that the magnitude of variable density flow increases with decreasing flow rates and decreasing density ratios. The shapes of the observed breakthrough curves differed significantly from those produced by 2D axisymmetric and 3D simulations. Compared to 2D simulations, the onset of instabilities was delayed but the growth was more pronounced in 3D simulations. Despite this difference, both 2D axisymmetric and 3D models successfully simulated mass recovery with high efficiency (between 77% and 99%). This study indicates that 2D simulations are sufficient to understand integrated features of variable density flow in homogeneous sand column experiments.

  7. Phase-field simulations of GaN growth by selective area epitaxy on complex mask geometries

    SciTech Connect

    Aagesen, Larry K.; Coltrin, Michael Elliott; Han, Jung; Thornton, Katsuyo

    2015-05-15

    Three-dimensional phase-field simulations of GaN growth by selective area epitaxy were performed. Furthermore, this model includes a crystallographic-orientation-dependent deposition rate and arbitrarily complex mask geometries. The orientation-dependent deposition rate can be determined from experimental measurements of the relative growth rates of low-index crystallographic facets. Growth on various complex mask geometries was simulated on both c-plane and a-plane template layers. Agreement was observed between simulations and experiment, including complex phenomena occurring at the intersections between facets. The sources of the discrepancies between simulated and experimental morphologies were also investigated. We found that the model provides a route to optimize masks and processing conditions during materials synthesis for solar cells, light-emitting diodes, and other electronic and opto-electronic applications.

  8. Phase-field simulations of GaN growth by selective area epitaxy from complex mask geometries

    SciTech Connect

    Aagesen, Larry K.; Thornton, Katsuyo; Coltrin, Michael E.; Han, Jung

    2015-05-21

    Three-dimensional phase-field simulations of GaN growth by selective area epitaxy were performed. The model includes a crystallographic-orientation-dependent deposition rate and arbitrarily complex mask geometries. The orientation-dependent deposition rate can be determined from experimental measurements of the relative growth rates of low-index crystallographic facets. Growth on various complex mask geometries was simulated on both c-plane and a-plane template layers. Agreement was observed between simulations and experiment, including complex phenomena occurring at the intersections between facets. The sources of the discrepancies between simulated and experimental morphologies were also investigated. The model provides a route to optimize masks and processing conditions during materials synthesis for solar cells, light-emitting diodes, and other electronic and opto-electronic applications.

  9. Phase-field simulations of GaN growth by selective area epitaxy on complex mask geometries

    DOE PAGES

    Aagesen, Larry K.; Coltrin, Michael Elliott; Han, Jung; ...

    2015-05-15

    Three-dimensional phase-field simulations of GaN growth by selective area epitaxy were performed. Furthermore, this model includes a crystallographic-orientation-dependent deposition rate and arbitrarily complex mask geometries. The orientation-dependent deposition rate can be determined from experimental measurements of the relative growth rates of low-index crystallographic facets. Growth on various complex mask geometries was simulated on both c-plane and a-plane template layers. Agreement was observed between simulations and experiment, including complex phenomena occurring at the intersections between facets. The sources of the discrepancies between simulated and experimental morphologies were also investigated. We found that the model provides a route to optimize masks andmore » processing conditions during materials synthesis for solar cells, light-emitting diodes, and other electronic and opto-electronic applications.« less

  10. 3D Printed Surgical Instruments Evaluated by a Simulated Crew of a Mars Mission.

    PubMed

    Wong, Julielynn Y; Pfahnl, Andreas C

    2016-09-01

    The first space-based fused deposition modeling (FDM) 3D printer became operational in 2014. This study evaluated whether Mars simulation crewmembers of the Hawai'i Space Exploration Analog and Simulation (HI-SEAS) II mission with no prior surgical experience could utilize acrylonitrile butadiene styrene (ABS) thermoplastic surgical instruments FDM 3D printed on Earth to complete simulated surgical tasks. This study sought to examine the feasibility of using 3D printed surgical tools when the primary crew medical officer is incapacitated and the back-up crew medical officer must conduct a surgical procedure during a simulated extended space mission. During a 4 mo duration ground-based analog mission, five simulation crewmembers with no prior surgical experience completed 16 timed sets of simulated prepping, draping, incising, and suturing tasks to evaluate the relative speed of using four ABS thermoplastic instruments printed on Earth compared to conventional instruments. All four simulated surgical tasks were successfully performed using 3D printed instruments by Mars simulation crewmembers with no prior surgical experience. There was no substantial difference in time to completion of simulated tasks with control vs. 3D printed sponge stick, towel clamp, scalpel handle, and toothed forceps. These limited findings support further investigation into the creation of an onboard digital catalog of validated 3D printable surgical instrument design files to support autonomous, crew-administered healthcare on Mars missions. Future work could include addressing sterility, biocompatibility, and having astronaut crew medical officers test a wider range of surgical instruments printed in microgravity during actual surgical procedures. Wong JY, Pfahnl AC. 3D printed surgical instruments evaluated by a simulated crew of a Mars mission. Aerosp Med Hum Perform. 2016; 87(9):806-810.

  11. The Effects of 3D Computer Simulation on Biology Students' Achievement and Memory Retention

    ERIC Educational Resources Information Center

    Elangovan, Tavasuria; Ismail, Zurida

    2014-01-01

    A quasi experimental study was conducted for six weeks to determine the effectiveness of two different 3D computer simulation based teaching methods, that is, realistic simulation and non-realistic simulation on Form Four Biology students' achievement and memory retention in Perak, Malaysia. A sample of 136 Form Four Biology students in Perak,…

  12. The Effects of 3D Computer Simulation on Biology Students' Achievement and Memory Retention

    ERIC Educational Resources Information Center

    Elangovan, Tavasuria; Ismail, Zurida

    2014-01-01

    A quasi experimental study was conducted for six weeks to determine the effectiveness of two different 3D computer simulation based teaching methods, that is, realistic simulation and non-realistic simulation on Form Four Biology students' achievement and memory retention in Perak, Malaysia. A sample of 136 Form Four Biology students in Perak,…

  13. Tunable thermal conductivity via domain structure engineering in ferroelectric thin films: A phase-field simulation

    DOE PAGES

    Wang, Jian -Jun; Wang, Yi; Ihlefeld, Jon F.; ...

    2016-04-06

    Effective thermal conductivity as a function of domain structure is studied by solving the heat conduction equation using a spectral iterative perturbation algorithm in materials with inhomogeneous thermal conductivity distribution. Using this proposed algorithm, the experimentally measured effective thermal conductivities of domain-engineered {001}p-BiFeO3 thin films are quantitatively reproduced. In conjunction with two other testing examples, this proposed algorithm is proven to be an efficient tool for interpreting the relationship between the effective thermal conductivity and micro-/domain-structures. By combining this algorithm with the phase-field model of ferroelectric thin films, the effective thermal conductivity for PbZr1-xTixO3 films under different composition, thickness, strain,more » and working conditions is predicted. It is shown that the chemical composition, misfit strain, film thickness, film orientation, and a Piezoresponse Force Microscopy tip can be used to engineer the domain structures and tune the effective thermal conductivity. Furthermore, we expect our findings will stimulate future theoretical, experimental and engineering efforts on developing devices based on the tunable effective thermal conductivity in ferroelectric nanostructures.« less

  14. Tunable thermal conductivity via domain structure engineering in ferroelectric thin films: A phase-field simulation

    SciTech Connect

    Wang, Jian -Jun; Wang, Yi; Ihlefeld, Jon F.; Hopkins, Patrick E.; Chen, Long -Qing

    2016-04-06

    Effective thermal conductivity as a function of domain structure is studied by solving the heat conduction equation using a spectral iterative perturbation algorithm in materials with inhomogeneous thermal conductivity distribution. Using this proposed algorithm, the experimentally measured effective thermal conductivities of domain-engineered {001}p-BiFeO3 thin films are quantitatively reproduced. In conjunction with two other testing examples, this proposed algorithm is proven to be an efficient tool for interpreting the relationship between the effective thermal conductivity and micro-/domain-structures. By combining this algorithm with the phase-field model of ferroelectric thin films, the effective thermal conductivity for PbZr1-xTixO3 films under different composition, thickness, strain, and working conditions is predicted. It is shown that the chemical composition, misfit strain, film thickness, film orientation, and a Piezoresponse Force Microscopy tip can be used to engineer the domain structures and tune the effective thermal conductivity. Furthermore, we expect our findings will stimulate future theoretical, experimental and engineering efforts on developing devices based on the tunable effective thermal conductivity in ferroelectric nanostructures.

  15. Phase field simulation of domain switching dynamics in multiaxial lead zirconate titanate thin films

    NASA Astrophysics Data System (ADS)

    Britson, Jason

    The defining characteristic of ferroelectric materials is their ability to be switched between energetically equivalent polarization states. This behavior has led to an interest in ferroelectrics for a wide range of bulk and thin film applications such as mechanical actuators and ferroelectric random access memory devices. Ferroelectric switching depends on domain wall motion, however, and is critically influenced by the existence of defects such as dislocations and preexisting domains. Domain wall motion in thin film applications can be controlled by individual local defects due to the reduced length scale of the system. This dissertation describes the impact of preexisting ferroelastic domains and misfits dislocations in coherent (001)-oriented Pb(Zr0.2,Ti0.8)O3 (PZT) thin films on the switching response and domain structure. A phase field model based on the Landau-Ginzburg-Devonshire theory that accounts for the electrostatic and mechanical interactions is used to describe domain structures in ferroelectric PZT thin films. To solve the governing equations a semi-implicit Fourier-Spectral scheme is developed that accommodates boundary conditions appropriate to the thin film geometry. Errors are reduced in the solutions at the film edges through extensions to the model developed to correct the Fourier transform around stationary discontinuities at the thin film edges. This correction is shown to result in increased accuracy of the phase field model needed to appropriately describe dynamic switching responses in the thin film. Investigation of switching around preexisting ferroelastic domains showed these defects are strong obstacles to switching in PZT thin films. Directly above the ferroelastic domain the magnitude of the required nucleation bias underneath a tip-like electrode was found to be elevated compared to the required bias far from the domain. Locally both the piezoelectric and dielectric responses of the thin film were found to be suppressed, which is

  16. Misfit strain-temperature phase diagrams and domain stability of asymmetric ferroelectric capacitors: Thermodynamic calculation and phase-field simulation

    SciTech Connect

    Chen, W. J.; Zheng, Yue Wu, C. M.; Wang, B. Ma, D. C.

    2014-03-07

    Thermodynamic calculation and phase-field simulation have been conducted to investigate the misfit strain-temperature phase diagrams, dielectric property, and domain stability of asymmetric ferroelectric capacitors (FCs), with considering the effects of dissimilar screening properties and work function steps at the two interfaces. The distinct features of asymmetric FCs from their symmetric counterparts have been revealed and discussed. Polar states with nonzero out-of-plane polarization in parallel with the built-in field are found preferential to form in asymmetric FCs. Meanwhile, the built-in field breaks the degeneracy of states with out-of-plane polarization in anti-directions. This leads to the necessity of redefining phases according to the bistability of out-of-plane polarization. Moreover, the phase stability as well as the dielectric behavior can be significantly controlled by the properties of electrodes, misfit strain, and temperature. The phase-field simulation result also shows that polydomain instability would happen in asymmetric FCs as the equivalence of domain stability in anti-directions is destroyed.

  17. Quasi-3D Modeling and Efficient Simulation of Laminar Flows in Microfluidic Devices.

    PubMed

    Islam, Md Zahurul; Tsui, Ying Yin

    2016-10-03

    A quasi-3D model has been developed to simulate the flow in planar microfluidic systems with low Reynolds numbers. The model was developed by decomposing the flow profile along the height of a microfluidic system into a Fourier series. It was validated against the analytical solution for flow in a straight rectangular channel and the full 3D numerical COMSOL Navier-Stokes solver for flow in a T-channel. Comparable accuracy to the full 3D numerical solution was achieved by using only three Fourier terms with a significant decrease in computation time. The quasi-3D model was used to model flows in a micro-flow cytometer chip on a desktop computer and good agreement between the simulation and the experimental results was found.

  18. New insights on pulsating white dwarfs from 3D radiation-hydrodynamical simulations

    NASA Astrophysics Data System (ADS)

    Tremblay, Pier-Emmanuel; Fontaine, Gilles; Ludwig, Hans-Günter; Gianninas, Alexandros; Kilic, Mukremin

    We have recently computed a grid of 3D radiation-hydrodynamical simulations for the atmosphere of pure-hydrogen DA white dwarfs in the range 5.0 < log g < 9.0. Our grid covers the full ZZ Ceti instability strip where pulsating DA white dwarfs are located. We have significantly improved the theoretical framework to study these objects by removing the free parameters of 1D convection, which were previously a major modeling hurdle. We present improved atmospheric parameter determinations based on spectroscopic fits with 3D model spectra, allowing for an updated definition of the empirical edges of the ZZ Ceti instability strip. Our 3D simulations also precisely predict the depth of the convection zones, narrowing down the internal layers where pulsation are being driven. We hope that these 3D effects will be included in asteroseismic models in the future to predict the region of the HR diagram where white dwarfs are expected to pulsate.

  19. Quasi-3D Modeling and Efficient Simulation of Laminar Flows in Microfluidic Devices

    PubMed Central

    Islam, Md. Zahurul; Tsui, Ying Yin

    2016-01-01

    A quasi-3D model has been developed to simulate the flow in planar microfluidic systems with low Reynolds numbers. The model was developed by decomposing the flow profile along the height of a microfluidic system into a Fourier series. It was validated against the analytical solution for flow in a straight rectangular channel and the full 3D numerical COMSOL Navier-Stokes solver for flow in a T-channel. Comparable accuracy to the full 3D numerical solution was achieved by using only three Fourier terms with a significant decrease in computation time. The quasi-3D model was used to model flows in a micro-flow cytometer chip on a desktop computer and good agreement between the simulation and the experimental results was found. PMID:27706104

  20. Three-dimensional (3D) printed endovascular simulation models: a feasibility study

    PubMed Central

    Nesbitt, Craig; McCaslin, James; Bagnall, Alan; Davey, Philip; Bose, Pentop; Williams, Rob

    2017-01-01

    Background Three-dimensional (3D) printing is a manufacturing process in which an object is created by specialist printers designed to print in additive layers to create a 3D object. Whilst there are initial promising medical applications of 3D printing, a lack of evidence to support its use remains a barrier for larger scale adoption into clinical practice. Endovascular virtual reality (VR) simulation plays an important role in the safe training of future endovascular practitioners, but existing VR models have disadvantages including cost and accessibility which could be addressed with 3D printing. Methods This study sought to evaluate the feasibility of 3D printing an anatomically accurate human aorta for the purposes of endovascular training. Results A 3D printed model was successfully designed and printed and used for endovascular simulation. The stages of development and practical applications are described. Feedback from 96 physicians who answered a series of questions using a 5 point Likert scale is presented. Conclusions Initial data supports the value of 3D printed endovascular models although further educational validation is required. PMID:28251121

  1. 3D Simulation of External Flooding Events for the RISMC Pathway

    SciTech Connect

    Prescott, Steven; Mandelli, Diego; Sampath, Ramprasad; Smith, Curtis; Lin, Linyu

    2015-09-01

    Incorporating 3D simulations as part of the Risk-Informed Safety Margins Characterization (RISMIC) Toolkit allows analysts to obtain a more complete picture of complex system behavior for events including external plant hazards. External events such as flooding have become more important recently – however these can be analyzed with existing and validated simulated physics toolkits. In this report, we describe these approaches specific to flooding-based analysis using an approach called Smoothed Particle Hydrodynamics. The theory, validation, and example applications of the 3D flooding simulation are described. Integrating these 3D simulation methods into computational risk analysis provides a spatial/visual aspect to the design, improves the realism of results, and can prove visual understanding to validate the analysis of flooding.

  2. Simulations of Coulomb systems with slab geometry using an efficient 3D Ewald summation method.

    PubMed

    dos Santos, Alexandre P; Girotto, Matheus; Levin, Yan

    2016-04-14

    We present a new approach to efficiently simulate electrolytes confined between infinite charged walls using a 3d Ewald summation method. The optimal performance is achieved by separating the electrostatic potential produced by the charged walls from the electrostatic potential of electrolyte. The electric field produced by the 3d periodic images of the walls is constant inside the simulation cell, with the field produced by the transverse images of the charged plates canceling out. The non-neutral confined electrolyte in an external potential can be simulated using 3d Ewald summation with a suitable renormalization of the electrostatic energy, to remove a divergence, and a correction that accounts for the conditional convergence of the resulting lattice sum. The new algorithm is at least an order of magnitude more rapid than the usual simulation methods for the slab geometry and can be further sped up by adopting a particle-particle particle-mesh approach.

  3. 3-D GRMHD Simulations of Disk-Jet Coupling and Emission

    NASA Technical Reports Server (NTRS)

    Nishikawa, K.-I.; Mizuno, Y.; Fuerst, S.; zei. zl/; Watson, M.; Hardee, P.; Koide, S.; Fishman, G. J.

    2006-01-01

    We have performed a fully 3-D GRMHD simulation of jet formation from a thin accretion disk around a Schwarzschild black hole with a free-falling corona. The simulation results show that a bipolar jet is initially created. At later times, the accretion disk becomes thick and the jet fades resulting in a wind that is ejected from the surface of the thickened (torus-like) disk. This evolution of disk-jet coupling suggests that the jet fades with a thickened accretion disk. Recently we have developed two new codes: 3 -D GRMHD: RelAtivIStic magnetoHydrodynamica1 sImulatioN (RAISHIN) code constructed by modern high-resolution shock-capturing (HRSC) techniques and 3-D GRPIC code. We have calculated free-free and synchrotron emission from the disks and jet/outflows obtained from our GRMHD simulations using a fully covariant radiative transfer formulation.

  4. Prototype Development Capabilities of 3D Spatial Interactions and Failures During Scenario Simulation

    SciTech Connect

    Steven Prescott; Ramprasad Sampath; Curtis Smith; Tony Koonce

    2014-09-01

    Computers have been used for 3D modeling and simulation, but only recently have computational resources been able to give realistic results in a reasonable time frame for large complex models. This report addressed the methods, techniques, and resources used to develop a prototype for using 3D modeling and simulation engine to improve risk analysis and evaluate reactor structures and components for a given scenario. The simulations done for this evaluation were focused on external events, specifically tsunami floods, for a hypothetical nuclear power facility on a coastline.

  5. Scalable Iterative Solvers Applied to 3D Parallel Simulation of Advanced Semiconductor Devices

    NASA Astrophysics Data System (ADS)

    García-Loureiro, A. J.; Aldegunde, M.; Seoane, N.

    2009-08-01

    We have studied the performance of a preconditioned iterative solver to speed up a 3D semiconductor device simulator. Since 3D simulations necessitate large computing resources, the choice of algorithms and their parameters become of utmost importance. This code uses a density gradient drift-diffusion semiconductor transport model based on the finite element method which is one of the most general and complex discretisation techniques. It has been implemented for a distributed memory multiprocessor environment using the Message Passing Interface (MPI) library. We have applied this simulator to a 67 nm effective gate length Si MOSFET.

  6. Three dimensional image-based simulation of ultrasonic wave propagation in polycrystalline metal using phase-field modeling.

    PubMed

    Nakahata, K; Sugahara, H; Barth, M; Köhler, B; Schubert, F

    2016-04-01

    When modeling ultrasonic wave propagation in metals, it is important to introduce mesoscopic crystalline structures because the anisotropy of the crystal structure and the heterogeneity of grains disturb ultrasonic waves. In this paper, a three-dimensional (3D) polycrystalline structure generated by multiphase-field modeling was introduced to ultrasonic simulation for nondestructive testing. 3D finite-element simulations of ultrasonic waves were validated and compared with visualization results obtained from laser Doppler vibrometer measurements. The simulation results and measurements showed good agreement with respect to the velocity and front shape of the pressure wave, as well as multiple scattering due to grains. This paper discussed the applicability of a transversely isotropic approach to ultrasonic wave propagation in a polycrystalline metal with columnar structures. Copyright © 2016 Elsevier B.V. All rights reserved.

  7. Phase field simulations of plastic strain-induced phase transformations under high pressure and large shear

    NASA Astrophysics Data System (ADS)

    Javanbakht, Mahdi; Levitas, Valery I.

    2016-12-01

    Pressure and shear strain-induced phase transformations (PTs) in a nanograined bicrystal at the evolving dislocations pile-up have been studied utilizing a phase field approach (PFA). The complete system of PFA equations for coupled martensitic PT, dislocation evolution, and mechanics at large strains is presented and solved using the finite element method (FEM). The nucleation pressure for the high-pressure phase (HPP) under hydrostatic conditions near a single dislocation was determined to be 15.9 GPa. Under shear, a dislocation pile-up that appears in the left grain creates strong stress concentration near its tip and significantly increases the local thermodynamic driving force for PT, which causes nucleation of HPP even at zero pressure. At pressures of 1.59 and 5 GPa and shear, a major part of a grain transforms to HPP. When dislocations are considered in the transforming grain as well, they relax stresses and lead to a slightly smaller stationary HPP region than without dislocations. However, they strongly suppress nucleation of HPP and require larger shear. Unexpectedly, the stationary HPP morphology is governed by the simplest thermodynamic equilibrium conditions, which do not contain contributions from plasticity and surface energy. These equilibrium conditions are fulfilled either for the majority of points of phase interfaces or (approximately) in terms of stresses averaged over the HPP region or for the entire grain, despite the strong heterogeneity of stress fields. The major part of the driving force for PT in the stationary state is due to deviatoric stresses rather than pressure. While the least number of dislocations in a pile-up to nucleate HPP linearly decreases with increasing applied pressure, the least corresponding shear strain depends on pressure nonmonotonously. Surprisingly, the ratio of kinetic coefficients for PT and dislocations affect the stationary solution and the nanostructure. Consequently, there are multiple stationary solutions

  8. The benefits of enhanced integration capabilities in 3-D reservoir modelling and simulation

    SciTech Connect

    O`Rourke, S.T.; Ikwumonu, A.

    1996-12-31

    The use of proprietary, closely linked 3-D geological and reservoir simulation software has greatly enhanced the reservoir modelling process by enabling complete integration of geological and engineering data in a 3-D manner. The software were used to model and simulate a deltaic sandstone reservoir in the Nigerian Forcados Yokri field in order to describe the reservoir sweep pattern. A simple simulation of the reservoir was first carried out to identify the main controls on the reservoir performance, which in this case were the intra-reservoir shales. As they are the only baffles or barriers to flow, proper modelling of them was critical to achieving a history match. Well logs, 3-D seismic, limited core data and sequence stratigraphic concepts were used to define a three dimensional depositional model which was then used to guide the 3-D reservoir architecture modelling. The reservoir model was evaluated in the 3-D simulator and, when the initial model did not yield a proper match with the historical production data, alternative models were easily generated and simulated until an acceptable match was achieved. The result was a 10% increase in predicted ultimate recovery, a better understanding of the reservoir and an optimized reservoir depletion plan.

  9. Modeling and Simulation of Plasmonic Lithography Process with Coupling Between Electromagnetic Wave Model, Phase Field Model and Heat Transfer Model

    NASA Astrophysics Data System (ADS)

    Chao, Ion Hong

    Plasmonic lithography may become a mainstream nano-fabrication technique in the future. Experimental results show that feature size with 22 nm resolution can be achieved by plasmonic lithography [1]. In Pan's experiment, a plasmonic lens is used to focus the laser energy with resolution much higher than the diffraction limit and thereby create features in the thermally sensitive material layer. The energy transport mechanisms are still not fully understood in the plasmonic lithography process. In order to predict the lithography resolution and explore the energy transport mechanisms involved in the process, customized electromagnetic wave and heat transfer models were developed in COMSOL. Parametric studies on both operating parameters and material properties were performed to optimize the lithography process. The parametric studies showed that the lithography process can be improved by either reducing the thickness of the phase change material layer or using a material with smaller real refractive index for that layer. Moreover, a phase field model was also developed in COMSOL to investigate the phase separation mechanism involved in creating features in plasmonic lithography. By including the effect of bond energy in this model, phase separation was obtained from the phase field model under isothermal conditions with speed much faster than the classical diffusion theory can predict. Mathematical transformation was applied to the phase field model, which was necessary for solving numerical issues to obtain the result of complete phase separation. Under isothermal conditions, the phase field model confirmed the fact that the speed of phase separation is determined by both particle mobility and thermodynamic driving force. The fast phase separation in the phase change material is mainly due to strong thermodynamic driving force from the bond energy. The phase field model was coupled with a heat transfer model to simulate phase separation under laser pulse heating

  10. Cerebral Aneurysm Clipping Surgery Simulation Using Patient-Specific 3D Printing and Silicone Casting.

    PubMed

    Ryan, Justin R; Almefty, Kaith K; Nakaji, Peter; Frakes, David H

    2016-04-01

    Neurosurgery simulator development is growing as practitioners recognize the need for improved instructional and rehearsal platforms to improve procedural skills and patient care. In addition, changes in practice patterns have decreased the volume of specific cases, such as aneurysm clippings, which reduces the opportunity for operating room experience. The authors developed a hands-on, dimensionally accurate model for aneurysm clipping using patient-derived anatomic data and three-dimensional (3D) printing. Design of the model focused on reproducibility as well as adaptability to new patient geometry. A modular, reproducible, and patient-derived medical simulacrum was developed for medical learners to practice aneurysmal clipping procedures. Various forms of 3D printing were used to develop a geometrically accurate cranium and vascular tree featuring 9 patient-derived aneurysms. 3D printing in conjunction with elastomeric casting was leveraged to achieve a patient-derived brain model with tactile properties not yet available from commercial 3D printing technology. An educational pilot study was performed to gauge simulation efficacy. Through the novel manufacturing process, a patient-derived simulacrum was developed for neurovascular surgical simulation. A follow-up qualitative study suggests potential to enhance current educational programs; assessments support the efficacy of the simulacrum. The proposed aneurysm clipping simulator has the potential to improve learning experiences in surgical environment. 3D printing and elastomeric casting can produce patient-derived models for a dynamic learning environment that add value to surgical training and preparation. Copyright © 2016 Elsevier Inc. All rights reserved.

  11. 3D-printed pediatric endoscopic ear surgery simulator for surgical training.

    PubMed

    Barber, Samuel R; Kozin, Elliott D; Dedmon, Matthew; Lin, Brian M; Lee, Kyuwon; Sinha, Sumi; Black, Nicole; Remenschneider, Aaron K; Lee, Daniel J

    2016-11-01

    Surgical simulators are designed to improve operative skills and patient safety. Transcanal Endoscopic Ear Surgery (TEES) is a relatively new surgical approach with a slow learning curve due to one-handed dissection. A reusable and customizable 3-dimensional (3D)-printed endoscopic ear surgery simulator may facilitate the development of surgical skills with high fidelity and low cost. Herein, we aim to design, fabricate, and test a low-cost and reusable 3D-printed TEES simulator. The TEES simulator was designed in computer-aided design (CAD) software using anatomic measurements taken from anthropometric studies. Cross sections from external auditory canal samples were traced as vectors and serially combined into a mesh construct. A modified tympanic cavity with a modular testing platform for simulator tasks was incorporated. Components were fabricated using calcium sulfate hemihydrate powder and multiple colored infiltrants via a commercial inkjet 3D-printing service. All components of a left-sided ear were printed to scale. Six right-handed trainees completed three trials each. Mean trial time (n = 3) ranged from 23.03 to 62.77 s using the dominant hand for all dissection. Statistically significant differences between first and last completion time with the dominant hand (p < 0.05) and average completion time for junior and senior residents (p < 0.05) suggest construct validity. A 3D-printed simulator is feasible for TEES simulation. Otolaryngology training programs with access to a 3D printer may readily fabricate a TEES simulator, resulting in inexpensive yet high-fidelity surgical simulation. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

  12. 3D simulation of tungsten low-pressure chemical vapor deposition in contact holes

    NASA Astrophysics Data System (ADS)

    Bär, E.; Lorenz, J.

    1995-10-01

    We present a new method for three-dimensional (3D) simulation of low-pressure chemical vapor deposition in arbitrary geometries using a segment-based topography discretization with triangles combined with the calculation of particle fluxes to the wafer surface. The simulation program is applied to tungsten LPCVD using the reduction of tungsten hexafluoride (WF 6) by silane (SiH 4). We found that an approach in which the redistribution of the SiH 4 molecules is simulated and a constant reaction probability after collision of a SiH 4 molecule with the surface is assumed allows the simulation of this process with a reaction probability which is consistent with thermodynamic calculations. A comparison between a simulated 3D profile and experimental data from tungsten LPCVD in a contact hole shows very good agreement between experiment and simulation.

  13. Stem dependence on stiffness in 3D RNA simulation using SimRNA

    NASA Astrophysics Data System (ADS)

    Dawson, Wayne; Boniecki, Michal; Bujnicki, Janusz

    2015-03-01

    SimRNA is a recently developed de novo 3D structure prediction program in our laboratory that uses the Monte Carlo method to search the conformation space of RNA using knowledge based energy functions. In developing the 3D model, we have also be exploring the larger physical questions about what generates differences in Kuhn length (a measure of stiffness) in biopolymers. In previoius work, this was shown to depend on the stem length and to be a function of the length and Young's modulus. A complete theoretical model was of the entropy changes due to the freezing out of degrees of freedom was developed base on this model. In this study, we find that this is further supported in the development of the 3D statitstical potentials for actual 3D simulations of RNA.

  14. Mixed reality orthognathic surgical simulation by entity model manipulation and 3D-image display

    NASA Astrophysics Data System (ADS)

    Shimonagayoshi, Tatsunari; Aoki, Yoshimitsu; Fushima, Kenji; Kobayashi, Masaru

    2005-12-01

    In orthognathic surgery, the framing of 3D-surgical planning that considers the balance between the front and back positions and the symmetry of the jawbone, as well as the dental occlusion of teeth, is essential. In this study, a support system for orthodontic surgery to visualize the changes in the mandible and the occlusal condition and to determine the optimum position in mandibular osteotomy has been developed. By integrating the operating portion of a tooth model that is to determine the optimum occlusal position by manipulating the entity tooth model and the 3D-CT skeletal images (3D image display portion) that are simultaneously displayed in real-time, the determination of the mandibular position and posture in which the improvement of skeletal morphology and occlusal condition is considered, is possible. The realistic operation of the entity model and the virtual 3D image display enabled the construction of a surgical simulation system that involves augmented reality.

  15. 3D current source density imaging based on acoustoelectric effect: a simulation study using unipolar pulses

    PubMed Central

    Yang, Renhuan; Li, Xu; Liu, Jun; He, Bin

    2011-01-01

    It is of importance to image electrical activity and properties of biological tissues. Recently hybrid imaging modality combing ultrasound scanning and source imaging through the acousto-electric (AE) effect has generated considerable interest. Such modality has the potential to provide high spatial resolution current density imaging by utilizing the pressure induced AE resistivity change confined at the ultrasound focus. In this study, we investigate a novel 3-dimensional (3D) ultrasound current source density imaging (UCSDI) approach using unipolar ultrasound pulses. Utilizing specially designed unipolar ultrasound pulses and by combining AE signals associated to the local resistivity changes at the focusing point, we are able to reconstruct the 3D current density distribution with the boundary voltage measurements obtained while performing a 3D ultrasound scan. We have shown in computer simulation that using the present method, it is feasible to image with high spatial resolution an arbitrary 3D current density distribution in an inhomogeneous conductive media. PMID:21628774

  16. 3D Printing Meets Computational Astrophysics: Deciphering the Structure of Eta Carinae’s Colliding Winds Using 3D Prints of Smoothed Particle Hydrodynamics Simulations

    NASA Astrophysics Data System (ADS)

    Madura, Thomas; Gull, Theodore R.; Clementel, Nicola; Paardekooper, Jan-Pieter; Kruip, Chael; Corcoran, Michael F.; Hamaguchi, Kenji; Teodoro, Mairan

    2015-01-01

    We present the first 3D prints of output from a supercomputer simulation of a complex astrophysical system, the colliding stellar winds in the massive (>120 MSun), highly eccentric (e ~ 0.9) binary Eta Carinae. Using a consumer-grade 3D printer (Makerbot Replicator 2X), we successfully printed 3D smoothed particle hydrodynamics simulations of Eta Carinae's inner (r ~110 AU) wind-wind collision interface at multiple orbital phases. These 3D prints reveal important, previously unknown 'finger-like' structures at orbital phases shortly after periastron (φ ~1.045) that protrude radially outward from the spiral wind-wind collision region. We speculate that these fingers are related to instabilities (e.g. Rayleigh-Taylor) that arise at the interface between the radiatively-cooled layer of dense post-shock primary-star wind and the hot, adiabatic post-shock companion-star wind. The success of our work and easy identification of previously unknown physical features highlight the important role 3D printing can play in the visualization and understanding of complex 3D time-dependent numerical simulations of astrophysical phenomena.

  17. Benchmark and comparisons of FEL simulation programs TDA3D and GENESIS.

    SciTech Connect

    Chae, Y.-C.; Milton, S.V.

    1999-09-11

    A low-energy undulator test line (LEUTL) is under construction at the Advanced Photon Source (APS). This line will initially be used to demonstrate a free-electron laser (FEL) based on the self-amplified spontaneous-emission (SASE) process. The FEL simulation programs, TDA3D and GENESIS, together with several other codes have been used for the LEUTL project. In order to increase the confidence on the simulation results, we attempted to benchmark two programs TDA3D and GENESIS. The results are reported here.

  18. Simulation approach of atomic layer deposition in large 3D structures

    NASA Astrophysics Data System (ADS)

    Schwille, Matthias C.; Barth, Jonas; Schössler, Timo; Schön, Florian; Bartha, Johann W.; Oettel, Martin

    2017-04-01

    We present a new simulation method predicting thicknesses of thin films obtained by atomic layer deposition in high aspect ratio 3D geometries as they appear in MEMS manufacturing. The method features a Monte-Carlo computation of film deposition in free molecular flow, as well as in the Knudsen and diffusive gas regime, applicable for large structures. We compare our approach to analytic and simulation results from the literature. The capability of the method is demonstrated by a comparison to experimental film thicknesses in a large 3D structure. Finally, the feasability to extract process parameters, i.e. sticking coefficients is shown.

  19. Ground motion simulations in Marmara (Turkey) region from 3D finite difference method

    NASA Astrophysics Data System (ADS)

    Aochi, Hideo; Ulrich, Thomas; Douglas, John

    2016-04-01

    In the framework of the European project MARSite (2012-2016), one of the main contributions from our research team was to provide ground-motion simulations for the Marmara region from various earthquake source scenarios. We adopted a 3D finite difference code, taking into account the 3D structure around the Sea of Marmara (including the bathymetry) and the sea layer. We simulated two moderate earthquakes (about Mw4.5) and found that the 3D structure improves significantly the waveforms compared to the 1D layer model. Simulations were carried out for different earthquakes (moderate point sources and large finite sources) in order to provide shake maps (Aochi and Ulrich, BSSA, 2015), to study the variability of ground-motion parameters (Douglas & Aochi, BSSA, 2016) as well as to provide synthetic seismograms for the blind inversion tests (Diao et al., GJI, 2016). The results are also planned to be integrated in broadband ground-motion simulations, tsunamis generation and simulations of triggered landslides (in progress by different partners). The simulations are freely shared among the partners via the internet and the visualization of the results is diffused on the project's homepage. All these simulations should be seen as a reference for this region, as they are based on the latest knowledge that obtained during the MARSite project, although their refinement and validation of the model parameters and the simulations are a continuing research task relying on continuing observations. The numerical code used, the models and the simulations are available on demand.

  20. A theoretical model and phase field simulation on the evolution of interface roughness in the oxidation process

    NASA Astrophysics Data System (ADS)

    Yang, Fan; Fang, Dai-Ning; Liu, Bin

    2012-01-01

    An oxidation kinetics model is developed to account for the effects of the oxidation interface curvature and the oxidation-induced volume change or Pilling-Bedworth ratio. For the oxidation of Fe-Cr-Al-Y alloy fiber, the predictions agree well with experimental results. By considering the influence of the oxidation interface curvature on oxidation rates, the evolution of fluctuant oxidation interface is predicted. We also developed the phase field method (PFM) to simulate the evolution of the interface roughness. Both the theoretical model and the PFM results show that the interface will become smooth during high temperature oxidation. Stress distribution and evolution are calculated by PFM, which indicates that the stress level decreases as the interface morphology evolves.

  1. Precipitation Processes Developed During ARM (1997), TOGA COARE (1992) GATE (1974), SCSMEX (1998), and KWAJEX (1999): Consistent 3D, Semi-3D and 3D Cloud Resolving Model Simulations

    NASA Technical Reports Server (NTRS)

    Tao, W.-K.; Hou, A.; Atlas, R.; Starr, D.; Sud, Y.

    2003-01-01

    Real clouds and cloud systems are inherently three-dimensional (3D). Because of the limitations in computer resources, however, most cloud-resolving models (CRMs) today are still two-dimensional (2D) have been used to study the response of clouds to large-scale forcing. IN these 3D simulators, the model domain was small, and the integration time was 6 hours. Only recently have 3D experiments been performed for multi-day periods for tropical clouds systems with large horizontal domains at the National Center of Atmospheric Research (NCAR) and at NASA Goddard Space Center. At Goddard, a 3D cumulus Ensemble (GCE) model was used to simulate periods during TOGA COARE, GATE, SCSMEX, ARM, and KWAJEX using a 512 by 512 km domain (with 2-km resolution). The result indicate that surface precipitation and latent heating profiles are very similar between the 2D and 3D GCE model simulation. The major objective of this paper are: (1) to assess the performance of the super-parametrization technique, (2) calculate and examine the surface energy (especially radiation) and water budget, and (3) identify the differences and similarities in the organization and entrainment rates of convection between simulated 2D and 3D cloud systems.

  2. Accurate load prediction by BEM with airfoil data from 3D RANS simulations

    NASA Astrophysics Data System (ADS)

    Schneider, Marc S.; Nitzsche, Jens; Hennings, Holger

    2016-09-01

    In this paper, two methods for the extraction of airfoil coefficients from 3D CFD simulations of a wind turbine rotor are investigated, and these coefficients are used to improve the load prediction of a BEM code. The coefficients are extracted from a number of steady RANS simulations, using either averaging of velocities in annular sections, or an inverse BEM approach for determination of the induction factors in the rotor plane. It is shown that these 3D rotor polars are able to capture the rotational augmentation at the inner part of the blade as well as the load reduction by 3D effects close to the blade tip. They are used as input to a simple BEM code and the results of this BEM with 3D rotor polars are compared to the predictions of BEM with 2D airfoil coefficients plus common empirical corrections for stall delay and tip loss. While BEM with 2D airfoil coefficients produces a very different radial distribution of loads than the RANS simulation, the BEM with 3D rotor polars manages to reproduce the loads from RANS very accurately for a variety of load cases, as long as the blade pitch angle is not too different from the cases from which the polars were extracted.

  3. Simulation-Guided 3D Nanomanufacturing via Focused Electron Beam Induced Deposition

    DOE PAGES

    Fowlkes, Jason D.; Winkler, Robert; Lewis, Brett B.; ...

    2016-06-10

    Focused electron beam induced deposition (FEBID) is one of the few techniques that enables direct-write synthesis of free-standing 3D nanostructures. While the fabrication of simple architectures such as vertical or curving nanowires has been achieved by simple trial and error, processing complex 3D structures is not tractable with this approach. This is due, inpart, to the dynamic interplay between electron–solid interactions and the transient spatial distribution of absorbed precursor molecules on the solid surface. Here, we demonstrate the ability to controllably deposit 3D lattice structures at the micro/nanoscale, which have received recent interest owing to superior mechanical and optical properties.more » Moreover, a hybrid Monte Carlo–continuum simulation is briefly overviewed, and subsequently FEBID experiments and simulations are directly compared. Finally, a 3D computer-aided design (CAD) program is introduced, which generates the beam parameters necessary for FEBID by both simulation and experiment. In using this approach, we demonstrate the fabrication of various 3D lattice structures using Pt-, Au-, and W-based precursors.« less

  4. Simulation-Guided 3D Nanomanufacturing via Focused Electron Beam Induced Deposition

    SciTech Connect

    Fowlkes, Jason D.; Winkler, Robert; Lewis, Brett B.; Stanford, Michael G.; Plank, Harald; Rack, Philip D.

    2016-06-10

    Focused electron beam induced deposition (FEBID) is one of the few techniques that enables direct-write synthesis of free-standing 3D nanostructures. While the fabrication of simple architectures such as vertical or curving nanowires has been achieved by simple trial and error, processing complex 3D structures is not tractable with this approach. This is due, inpart, to the dynamic interplay between electron–solid interactions and the transient spatial distribution of absorbed precursor molecules on the solid surface. Here, we demonstrate the ability to controllably deposit 3D lattice structures at the micro/nanoscale, which have received recent interest owing to superior mechanical and optical properties. Moreover, a hybrid Monte Carlo–continuum simulation is briefly overviewed, and subsequently FEBID experiments and simulations are directly compared. Finally, a 3D computer-aided design (CAD) program is introduced, which generates the beam parameters necessary for FEBID by both simulation and experiment. In using this approach, we demonstrate the fabrication of various 3D lattice structures using Pt-, Au-, and W-based precursors.

  5. 2D-3D hybrid stabilized finite element method for tsunami runup simulations

    NASA Astrophysics Data System (ADS)

    Takase, S.; Moriguchi, S.; Terada, K.; Kato, J.; Kyoya, T.; Kashiyama, K.; Kotani, T.

    2016-09-01

    This paper presents a two-dimensional (2D)-three-dimensional (3D) hybrid stabilized finite element method that enables us to predict a propagation process of tsunami generated in a hypocentral region, which ranges from offshore propagation to runup to urban areas, with high accuracy and relatively low computational costs. To be more specific, the 2D shallow water equation is employed to simulate the propagation of offshore waves, while the 3D Navier-Stokes equation is employed for the runup in urban areas. The stabilized finite element method is utilized for numerical simulations for both of the 2D and 3D domains that are independently discretized with unstructured meshes. The multi-point constraint and transmission methods are applied to satisfy the continuity of flow velocities and pressures at the interface between the resulting 2D and 3D meshes, since neither their spatial dimensions nor node arrangements are consistent. Numerical examples are presented to demonstrate the performance of the proposed hybrid method to simulate tsunami behavior, including offshore propagation and runup to urban areas, with substantially lower computation costs in comparison with full 3D computations.

  6. Simulation-Guided 3D Nanomanufacturing via Focused Electron Beam Induced Deposition

    SciTech Connect

    Fowlkes, Jason D.; Winkler, Robert; Lewis, Brett B.; Stanford, Michael G.; Plank, Harald; Rack, Philip D.

    2016-06-10

    Focused electron beam induced deposition (FEBID) is one of the few techniques that enables direct-write synthesis of free-standing 3D nanostructures. While the fabrication of simple architectures such as vertical or curving nanowires has been achieved by simple trial and error, processing complex 3D structures is not tractable with this approach. This is due, inpart, to the dynamic interplay between electron–solid interactions and the transient spatial distribution of absorbed precursor molecules on the solid surface. Here, we demonstrate the ability to controllably deposit 3D lattice structures at the micro/nanoscale, which have received recent interest owing to superior mechanical and optical properties. Moreover, a hybrid Monte Carlo–continuum simulation is briefly overviewed, and subsequently FEBID experiments and simulations are directly compared. Finally, a 3D computer-aided design (CAD) program is introduced, which generates the beam parameters necessary for FEBID by both simulation and experiment. In using this approach, we demonstrate the fabrication of various 3D lattice structures using Pt-, Au-, and W-based precursors.

  7. Precipitation of T1 and θ′ Phase in Al-4Cu-1Li-0.25Mn During Age Hardening: Microstructural Investigation and Phase-Field Simulation

    PubMed Central

    Häusler, Ines; Schwarze, Christian; Bilal, Muhammad Umer; Valencia Ramirez, Daniela; Hetaba, Walid; Darvishi Kamachali, Reza; Skrotzki, Birgit

    2017-01-01

    Experimental and phase field studies of age hardening response of a high purity Al-4Cu-1Li-0.25Mn-alloy (mass %) during isothermal aging are conducted. In the experiments, two hardening phases are identified: the tetragonal θ′ (Al2Cu) phase and the hexagonal T1 (Al2CuLi) phase. Both are plate shaped and of nm size. They are analyzed with respect to the development of their size, number density and volume fraction during aging by applying different analysis techniques in TEM in combination with quantitative microstructural analysis. 3D phase-field simulations of formation and growth of θ′ phase are performed in which the full interfacial, chemical and elastic energy contributions are taken into account. 2D simulations of T1 phase are also investigated using multi-component diffusion without elasticity. This is a first step toward a complex phase-field study of T1 phase in the ternary alloy. The comparison between experimental and simulated data shows similar trends. The still unsaturated volume fraction indicates that the precipitates are in the growth stage and that the coarsening/ripening stage has not yet been reached. PMID:28772481

  8. A Novel Temporal Bone Simulation Model Using 3D Printing Techniques.

    PubMed

    Mowry, Sarah E; Jammal, Hachem; Myer, Charles; Solares, Clementino Arturo; Weinberger, Paul

    2015-09-01

    An inexpensive temporal bone model for use in a temporal bone dissection laboratory setting can be made using a commercially available, consumer-grade 3D printer. Several models for a simulated temporal bone have been described but use commercial-grade printers and materials to produce these models. The goal of this project was to produce a plastic simulated temporal bone on an inexpensive 3D printer that recreates the visual and haptic experience associated with drilling a human temporal bone. Images from a high-resolution CT of a normal temporal bone were converted into stereolithography files via commercially available software, with image conversion and print settings adjusted to achieve optimal print quality. The temporal bone model was printed using acrylonitrile butadiene styrene (ABS) plastic filament on a MakerBot 2x 3D printer. Simulated temporal bones were drilled by seven expert temporal bone surgeons, assessing the fidelity of the model as compared with a human cadaveric temporal bone. Using a four-point scale, the simulated bones were assessed for haptic experience and recreation of the temporal bone anatomy. The created model was felt to be an accurate representation of a human temporal bone. All raters felt strongly this would be a good training model for junior residents or to simulate difficult surgical anatomy. Material cost for each model was $1.92. A realistic, inexpensive, and easily reproducible temporal bone model can be created on a consumer-grade desktop 3D printer.

  9. Interactive virtual simulation using a 3D computer graphics model for microvascular decompression surgery.

    PubMed

    Oishi, Makoto; Fukuda, Masafumi; Hiraishi, Tetsuya; Yajima, Naoki; Sato, Yosuke; Fujii, Yukihiko

    2012-09-01

    The purpose of this paper is to report on the authors' advanced presurgical interactive virtual simulation technique using a 3D computer graphics model for microvascular decompression (MVD) surgery. The authors performed interactive virtual simulation prior to surgery in 26 patients with trigeminal neuralgia or hemifacial spasm. The 3D computer graphics models for interactive virtual simulation were composed of the brainstem, cerebellum, cranial nerves, vessels, and skull individually created by the image analysis, including segmentation, surface rendering, and data fusion for data collected by 3-T MRI and 64-row multidetector CT systems. Interactive virtual simulation was performed by employing novel computer-aided design software with manipulation of a haptic device to imitate the surgical procedures of bone drilling and retraction of the cerebellum. The findings were compared with intraoperative findings. In all patients, interactive virtual simulation provided detailed and realistic surgical perspectives, of sufficient quality, representing the lateral suboccipital route. The causes of trigeminal neuralgia or hemifacial spasm determined by observing 3D computer graphics models were concordant with those identified intraoperatively in 25 (96%) of 26 patients, which was a significantly higher rate than the 73% concordance rate (concordance in 19 of 26 patients) obtained by review of 2D images only (p < 0.05). Surgeons evaluated interactive virtual simulation as having "prominent" utility for carrying out the entire surgical procedure in 50% of cases. It was evaluated as moderately useful or "supportive" in the other 50% of cases. There were no cases in which it was evaluated as having no utility. The utilities of interactive virtual simulation were associated with atypical or complex forms of neurovascular compression and structural restrictions in the surgical window. Finally, MVD procedures were performed as simulated in 23 (88%) of the 26 patients . Our

  10. Flexible simulation framework to couple processes in complex 3D models for subsurface utilization assessment

    NASA Astrophysics Data System (ADS)

    Kempka, Thomas; Nakaten, Benjamin; De Lucia, Marco; Nakaten, Natalie; Otto, Christopher; Pohl, Maik; Tillner, Elena; Kühn, Michael

    2016-04-01

    Utilization of the geological subsurface for production and storage of hydrocarbons, chemical energy and heat as well as for waste disposal requires the quantification and mitigation of environmental impacts as well as the improvement of georesources utilization in terms of efficiency and sustainability. The development of tools for coupled process simulations is essential to tackle these challenges, since reliable assessments are only feasible by integrative numerical computations. Coupled processes at reservoir to regional scale determine the behaviour of reservoirs, faults and caprocks, generally demanding for complex 3D geological models to be considered besides available monitoring and experimenting data in coupled numerical simulations. We have been developing a flexible numerical simulation framework that provides efficient workflows for integrating the required data and software packages to carry out coupled process simulations considering, e.g., multiphase fluid flow, geomechanics, geochemistry and heat. Simulation results are stored in structured data formats to allow for an integrated 3D visualization and result interpretation as well as data archiving and its provision to collaborators. The main benefits in using the flexible simulation framework are the integration of data geological and grid data from any third party software package as well as data export to generic 3D visualization tools and archiving formats. The coupling of the required process simulators in time and space is feasible, while different spatial dimensions in the coupled simulations can be integrated, e.g., 0D batch with 3D dynamic simulations. User interaction is established via high-level programming languages, while computational efficiency is achieved by using low-level programming languages. We present three case studies on the assessment of geological subsurface utilization based on different process coupling approaches and numerical simulations.

  11. 3D simulations of fluctuation spectra in the hall-MHD plasma.

    PubMed

    Shaikh, Dastgeer; Shukla, P K

    2009-01-30

    Turbulent spectral cascades are investigated by means of fully three-dimensional (3D) simulations of a compressible Hall-magnetohydrodynamic (H-MHD) plasma in order to understand the observed spectral break in the solar wind turbulence spectra in the regime where the characteristic length scales associated with electromagnetic fluctuations are smaller than the ion gyroradius. In this regime, the results of our 3D simulations exhibit that turbulent spectral cascades in the presence of a mean magnetic field follow an omnidirectional anisotropic inertial-range spectrum close to k(-7/3). The latter is associated with the Hall current arising from nonequal electron and ion fluid velocities in our 3D H-MHD plasma model.

  12. 3-D FDTD simulation of shear waves for evaluation of complex modulus imaging.

    PubMed

    Orescanin, Marko; Wang, Yue; Insana, Michael

    2011-02-01

    The Navier equation describing shear wave propagation in 3-D viscoelastic media is solved numerically with a finite differences time domain (FDTD) method. Solutions are formed in terms of transverse scatterer velocity waves and then verified via comparison to measured wave fields in heterogeneous hydrogel phantoms. The numerical algorithm is used as a tool to study the effects on complex shear modulus estimation from wave propagation in heterogeneous viscoelastic media. We used an algebraic Helmholtz inversion (AHI) technique to solve for the complex shear modulus from simulated and experimental velocity data acquired in 2-D and 3-D. Although 3-D velocity estimates are required in general, there are object geometries for which 2-D inversions provide accurate estimations of the material properties. Through simulations and experiments, we explored artifacts generated in elastic and dynamic-viscous shear modulus images related to the shear wavelength and average viscosity.

  13. 3D numerical simulation analysis of passive drag near free surface in swimming

    NASA Astrophysics Data System (ADS)

    Zhan, Jie-min; Li, Tian-zeng; Chen, Xue-bin; Li, Yok-sheung; Wai, Wing-hong Onyx

    2015-04-01

    The aim of this work is to build a 3D numerical model to study the characteristics of passive drag on competitive swimmers taking into account the impact of the free surface. This model solves the 3D incompressible Navier-Stokes equations using RNG k- ɛ turbulence closure. The volume of fluid (VOF) method is used to locate the free surface. The 3D virtual model is created by Computer Aided Industrial Design (CAID) software, Rhinoceros. Firstly, a specific posture of swimming is studied. The simulation results are in good agreement with the data from mannequin towing experiments. The effects of a swimmer's arms and legs positions on swimming performance are then studied. Finally, it is demonstrated that the present method is capable of simulating gliding near the free surface.

  14. 3D particle simulations of space-charge-dominated beams in HIF accelerator experiments

    SciTech Connect

    Grote, D.P.; Friedman, A.; Lund, S.M.; Haber, I.

    1997-05-01

    The development of a high current, heavy-ion beam for inertial confinement fusion requires a detailed understanding of the behavior of the beam, including effects of the large self-fields. This necessity makes particle-in-cell (PIC) simulation the appropriate tool, and for this reason, the three-dimensional PIC/accelerator code WARP3d is being developed. WARP3d has been used extensively to study the creation and propagation of ion beams both to support experiments and for the understanding of basic beam physics. An overview of the structure of the code is presented along with a discussion of features that make the code an effective tool in the understanding of space-charge dominated beam behavior. A number of applications where WARP3d has played an important role is discussed, emphasizing the need of three-dimensional, first principles simulations. Results and comparisons with experiment are presented.

  15. Stochastic microstructure modeling and electrochemical simulation of lithium-ion cell anodes in 3D

    NASA Astrophysics Data System (ADS)

    Hein, Simon; Feinauer, Julian; Westhoff, Daniel; Manke, Ingo; Schmidt, Volker; Latz, Arnulf

    2016-12-01

    Thermodynamically consistent transport theory is used to compare 3D images of real anode microstructures from lithium-ion batteries to virtual ones created by a parametric stochastic 3D microstructure model. Half-cell simulations in 3D with spatially resolved microstructures at different applied currents show that for low currents the deviations between various electrochemical quantities like current density or overpotential are negligibly small. For larger currents small differences become more pronounced. Qualitative and quantitative differences of these features are discussed with respect to the microstructure and it is shown that the real and virtual structures behave similar during electrochemical simulations. Extensions of the stochastic microstructure model, which overcome small differences in electrochemical behavior, are proposed.

  16. Proving the possibility of using Delft3D in irrigation systems simulations

    NASA Astrophysics Data System (ADS)

    Theol, Shaimaa; Suryadi, Francisco; de-Fraiture, Charlotte; Jagers, Bert

    2017-04-01

    Irrigation system's performance and sustainability are highly affected by sediment deposition. A significant amount of research has been carried out regarding non-cohesive sedimentation in rivers, coastal, estuaries and irrigation canals. For cohesive sediments, research has been undertaken only in rivers and estuaries, but not in irrigation canals. Also most of mathematical models are used for rivers, few models are used for irrigation canals. There is hardly any mathematical model that simulates cohesive sediments in irrigation systems. From literature review it was found that Delft3d model, which is originally designed for rivers, is suitable because it can simulate cohesive sediments and it deals with networks, also because of the big similarities between rivers and irrigation systems. This study verifies the possibility of using Delft3d in simulation of irrigation canals from a hydrodynamic and morphodynamic points of view. For this purpose the Delft3D model was applied to a hypothetical case study where a main canal feeds one branch canal to simulate flow in several canals with different sizes. In scenario 1 and 2 it is assumed that no sediment is in the system and its results are compared with other results obtained from mathematical model which is originally used in irrigation canals named DUFLOW model. The results of scenario 1 and 2 were too close to each other and the flow was steady in the canal, therefore based on the results of the comparison it can be stated that Delft3d model is suitable to be used in irrigation systems from hydrodynamic point of view. After getting these satisfactory results and proved ability of delft3d, scenario 3 were taken assuming cohesive sediments enter an irrigation systems with concentration equal to 0.05 kg/m3. Delft3d gave good image about cohesive sediments behaviour, so it can be stated that Delft3d model is suitable to be used in irrigation systems from morphodynamic point of view despite some constrains As a forward

  17. "Just-In-Time" Simulation Training Using 3-D Printed Cardiac Models After Congenital Cardiac Surgery.

    PubMed

    Olivieri, Laura J; Su, Lillian; Hynes, Conor F; Krieger, Axel; Alfares, Fahad A; Ramakrishnan, Karthik; Zurakowski, David; Marshall, M Blair; Kim, Peter C W; Jonas, Richard A; Nath, Dilip S

    2016-03-01

    High-fidelity simulation using patient-specific three-dimensional (3D) models may be effective in facilitating pediatric cardiac intensive care unit (PCICU) provider training for clinical management of congenital cardiac surgery patients. The 3D-printed heart models were rendered from preoperative cross-sectional cardiac imaging for 10 patients undergoing congenital cardiac surgery. Immediately following surgical repair, a congenital cardiac surgeon and an intensive care physician conducted a simulation training session regarding postoperative care utilizing the patient-specific 3D model for the PCICU team. After the simulation, Likert-type 0 to 10 scale questionnaire assessed participant perception of impact of the training session. Seventy clinicians participated in training sessions, including 22 physicians, 38 nurses, and 10 ancillary care providers. Average response to whether 3D models were more helpful than standard hand off was 8.4 of 10. Questions regarding enhancement of understanding and clinical ability received average responses of 9.0 or greater, and 90% of participants scored 8 of 10 or higher. Nurses scored significantly higher than other clinicians on self-reported familiarity with the surgery (7.1 vs. 5.8; P = .04), clinical management ability (8.6 vs. 7.7; P = .02), and ability enhancement (9.5 vs. 8.7; P = .02). Compared to physicians, nurses and ancillary providers were more likely to consider 3D models more helpful than standard hand off (8.7 vs. 7.7; P = .05). Higher case complexity predicted greater enhancement of understanding of surgery (P = .04). The 3D heart models can be used to enhance congenital cardiac critical care via simulation training of multidisciplinary intensive care teams. Benefit may be dependent on provider type and case complexity. © The Author(s) 2016.

  18. Numerical simulations and vorticity dynamics of self-propelled swimming of 3D bionic fish

    NASA Astrophysics Data System (ADS)

    Xin, ZhiQiang; Wu, ChuiJie

    2012-02-01

    Numerical simulations and the control of self-propelled swimming of three-dimensional bionic fish in a viscous flow and the mechanism of fish swimming are carried out in this study, with a 3D computational fluid dynamics package, which includes the immersed boundary method and the volume of fluid method, the adaptive multi-grid finite volume method, and the control strategy of fish swimming. Firstly, the mechanism of 3D fish swimming was studied and the vorticity dynamics root was traced to the moving body surface by using the boundary vorticity-flux theory. With the change of swimming speed, the contributions of the fish body and caudal fin to thrust are analyzed quantitatively. The relationship between vortex structures of fish swimming and the forces exerted on the fish body are also given in this paper. Finally, the 3D wake structure of self-propelled swimming of 3D bionic fish is presented. The in-depth analysis of the 3D vortex structure in the role of 3D biomimetic fish swimming is also performed.

  19. Multi-scale simulations of space problems with iPIC3D

    NASA Astrophysics Data System (ADS)

    Lapenta, Giovanni; Bettarini, Lapo; Markidis, Stefano

    The implicit Particle-in-Cell method for the computer simulation of space plasma, and its im-plementation in a three-dimensional parallel code, called iPIC3D, are presented. The implicit integration in time of the Vlasov-Maxwell system removes the numerical stability constraints and enables kinetic plasma simulations at magnetohydrodynamics scales. Simulations of mag-netic reconnection in plasma are presented to show the effectiveness of the algorithm. In particular we will show a number of simulations done for large scale 3D systems using the physical mass ratio for Hydrogen. Most notably one simulation treats kinetically a box of tens of Earth radii in each direction and was conducted using about 16000 processors of the Pleiades NASA computer. The work is conducted in collaboration with the MMS-IDS theory team from University of Colorado (M. Goldman, D. Newman and L. Andersson). Reference: Stefano Markidis, Giovanni Lapenta, Rizwan-uddin Multi-scale simulations of plasma with iPIC3D Mathematics and Computers in Simulation, Available online 17 October 2009, http://dx.doi.org/10.1016/j.matcom.2009.08.038

  20. Peach Bottom 2 Turbine Trip Simulation Using TRAC-BF1/COS3D, a Best-Estimate Coupled 3-D Core and Thermal-Hydraulic Code System

    SciTech Connect

    Ui, Atsushi; Miyaji, Takamasa

    2004-10-15

    The best-estimate coupled three-dimensional (3-D) core and thermal-hydraulic code system TRAC-BF1/COS3D has been developed. COS3D, based on a modified one-group neutronic model, is a 3-D core simulator used for licensing analyses and core management of commercial boiling water reactor (BWR) plants in Japan. TRAC-BF1 is a plant simulator based on a two-fluid model. TRAC-BF1/COS3D is a coupled system of both codes, which are connected using a parallel computing tool. This code system was applied to the OECD/NRC BWR Turbine Trip Benchmark. Since the two-group cross-section tables are provided by the benchmark team, COS3D was modified to apply to this specification. Three best-estimate scenarios and four hypothetical scenarios were calculated using this code system. In the best-estimate scenario, the predicted core power with TRAC-BF1/COS3D is slightly underestimated compared with the measured data. The reason seems to be a slight difference in the core boundary conditions, that is, pressure changes and the core inlet flow distribution, because the peak in this analysis is sensitive to them. However, the results of this benchmark analysis show that TRAC-BF1/COS3D gives good precision for the prediction of the actual BWR transient behavior on the whole. Furthermore, the results with the modified one-group model and the two-group model were compared to verify the application of the modified one-group model to this benchmark. This comparison shows that the results of the modified one-group model are appropriate and sufficiently precise.

  1. 3D simulation of silicon micro-ring resonator with Comsol

    NASA Astrophysics Data System (ADS)

    Degtyarev, S. A.; Podlipnov, V. V.; Verma, Payal; Khonina, S. N.

    2016-12-01

    In this paper we provide 3d full-vector static electromagnetic simulation of silicon micro-ring resonator operating. We show that geometrical and scalar approaches are not sufficiently accurate for calculating resonator parameters. Quite strong dependence of ring resonator radius on waveguide width is revealed.

  2. An Object-Oriented Simulator for 3D Digital Breast Tomosynthesis Imaging System

    PubMed Central

    Cengiz, Kubra

    2013-01-01

    Digital breast tomosynthesis (DBT) is an innovative imaging modality that provides 3D reconstructed images of breast to detect the breast cancer. Projections obtained with an X-ray source moving in a limited angle interval are used to reconstruct 3D image of breast. Several reconstruction algorithms are available for DBT imaging. Filtered back projection algorithm has traditionally been used to reconstruct images from projections. Iterative reconstruction algorithms such as algebraic reconstruction technique (ART) were later developed. Recently, compressed sensing based methods have been proposed in tomosynthesis imaging problem. We have developed an object-oriented simulator for 3D digital breast tomosynthesis (DBT) imaging system using C++ programming language. The simulator is capable of implementing different iterative and compressed sensing based reconstruction methods on 3D digital tomosynthesis data sets and phantom models. A user friendly graphical user interface (GUI) helps users to select and run the desired methods on the designed phantom models or real data sets. The simulator has been tested on a phantom study that simulates breast tomosynthesis imaging problem. Results obtained with various methods including algebraic reconstruction technique (ART) and total variation regularized reconstruction techniques (ART+TV) are presented. Reconstruction results of the methods are compared both visually and quantitatively by evaluating performances of the methods using mean structural similarity (MSSIM) values. PMID:24371468

  3. Online Stereo 3D Simulation in Studying the Spherical Pendulum in Conservative Force Field

    ERIC Educational Resources Information Center

    Zabunov, Svetoslav S.

    2013-01-01

    The current paper aims at presenting a modern e-learning method and tool that is utilized in teaching physics in the universities. An online stereo 3D simulation is used for e-learning mechanics and specifically the teaching of spherical pendulum as part of the General Physics course for students in the universities. This approach was realized on…

  4. PEGASUS. 3D Direct Simulation Monte Carlo Code Which Solves for Geometrics

    SciTech Connect

    Bartel, T.J.

    1998-12-01

    Pegasus is a 3D Direct Simulation Monte Carlo Code which solves for geometries which can be represented by bodies of revolution. Included are all the surface chemistry enhancements in the 2D code Icarus as well as a real vacuum pump model. The code includes multiple species transport.

  5. 3D Direct Simulation Monte Carlo Code Which Solves for Geometrics

    SciTech Connect

    Bartel, Timothy J.

    1998-01-13

    Pegasus is a 3D Direct Simulation Monte Carlo Code which solves for geometries which can be represented by bodies of revolution. Included are all the surface chemistry enhancements in the 2D code Icarus as well as a real vacuum pump model. The code includes multiple species transport.

  6. Results of a 3-D full particle simulation of quasi-perpendicular shock

    NASA Astrophysics Data System (ADS)

    Shinohara, I.; Fujimoto, M.

    2010-12-01

    Recent progress of computational power enables us to perform really macro-scale three-dimensional situations with full particle codes. In this presentation, we will report results of a three-dimensional simulation of a quasi-perpendicular shock. The simulation parameters were selected to simulate a Cluster-II observational result reported by Seki et al. (2009), M_A=7.4 and beta=0.16. The realistic mass ratio mi/me=1840 was taken, and almost one ion inertia length square could be allocated to the plane perpendicular to the upstream flow axis. The result shows that both the self-reformation process and whistler emission are observed. However, the 3-D result is not a simple superposition of 2-D results. The most impressive feature is that quite complicated wave activity is found in the shock foot region. With the help of this wave activity, electron heating observed in the 3-D run is more efficient than those in the 1-D and 2-D runs with the same shock parameters. Moreover, non-thermal electrons are also produced only in the 3D run. In this paper, comparing the 3-D result with previous 1-D and 2-D simulation results, three dimensional nature of the shock transition region of quasi-perpendicular shock is discussed.

  7. Qualitative Assessment of a 3D Simulation Program: Faculty, Students, and Bio-Organic Reaction Animations

    ERIC Educational Resources Information Center

    Günersel, Adalet B.; Fleming, Steven A.

    2013-01-01

    Research shows that computer-based simulations and animations are especially helpful in fields such as chemistry where concepts are abstract and cannot be directly observed. Bio-Organic Reaction Animations (BioORA) is a freely available 3D visualization software program developed to help students understand the chemistry of biomolecular events.…

  8. Learning Patterns as Criterion for Forming Work Groups in 3D Simulation Learning Environments

    ERIC Educational Resources Information Center

    Maria Cela-Ranilla, Jose; Molías, Luis Marqués; Cervera, Mercè Gisbert

    2016-01-01

    This study analyzes the relationship between the use of learning patterns as a grouping criterion to develop learning activities in the 3D simulation environment at University. Participants included 72 Spanish students from the Education and Marketing disciplines. Descriptive statistics and non-parametric tests were conducted. The process was…

  9. Qualitative Assessment of a 3D Simulation Program: Faculty, Students, and Bio-Organic Reaction Animations

    ERIC Educational Resources Information Center

    Günersel, Adalet B.; Fleming, Steven A.

    2013-01-01

    Research shows that computer-based simulations and animations are especially helpful in fields such as chemistry where concepts are abstract and cannot be directly observed. Bio-Organic Reaction Animations (BioORA) is a freely available 3D visualization software program developed to help students understand the chemistry of biomolecular events.…

  10. Learning Patterns as Criterion for Forming Work Groups in 3D Simulation Learning Environments

    ERIC Educational Resources Information Center

    Maria Cela-Ranilla, Jose; Molías, Luis Marqués; Cervera, Mercè Gisbert

    2016-01-01

    This study analyzes the relationship between the use of learning patterns as a grouping criterion to develop learning activities in the 3D simulation environment at University. Participants included 72 Spanish students from the Education and Marketing disciplines. Descriptive statistics and non-parametric tests were conducted. The process was…

  11. Structured light imaging system for structural and optical characterization of 3D tissue-simulating phantoms

    NASA Astrophysics Data System (ADS)

    Liu, Songde; Smith, Zach; Xu, Ronald X.

    2016-10-01

    There is a pressing need for a phantom standard to calibrate medical optical devices. However, 3D printing of tissue-simulating phantom standard is challenged by lacking of appropriate methods to characterize and reproduce surface topography and optical properties accurately. We have developed a structured light imaging system to characterize surface topography and optical properties (absorption coefficient and reduced scattering coefficient) of 3D tissue-simulating phantoms. The system consisted of a hyperspectral light source, a digital light projector (DLP), a CMOS camera, two polarizers, a rotational stage, a translation stage, a motion controller, and a personal computer. Tissue-simulating phantoms with different structural and optical properties were characterized by the proposed imaging system and validated by a standard integrating sphere system. The experimental results showed that the proposed system was able to achieve pixel-level optical properties with a percentage error of less than 11% for absorption coefficient and less than 7% for reduced scattering coefficient for phantoms without surface curvature. In the meanwhile, 3D topographic profile of the phantom can be effectively reconstructed with an accuracy of less than 1% deviation error. Our study demonstrated that the proposed structured light imaging system has the potential to characterize structural profile and optical properties of 3D tissue-simulating phantoms.

  12. An object-oriented simulator for 3D digital breast tomosynthesis imaging system.

    PubMed

    Seyyedi, Saeed; Cengiz, Kubra; Kamasak, Mustafa; Yildirim, Isa

    2013-01-01

    Digital breast tomosynthesis (DBT) is an innovative imaging modality that provides 3D reconstructed images of breast to detect the breast cancer. Projections obtained with an X-ray source moving in a limited angle interval are used to reconstruct 3D image of breast. Several reconstruction algorithms are available for DBT imaging. Filtered back projection algorithm has traditionally been used to reconstruct images from projections. Iterative reconstruction algorithms such as algebraic reconstruction technique (ART) were later developed. Recently, compressed sensing based methods have been proposed in tomosynthesis imaging problem. We have developed an object-oriented simulator for 3D digital breast tomosynthesis (DBT) imaging system using C++ programming language. The simulator is capable of implementing different iterative and compressed sensing based reconstruction methods on 3D digital tomosynthesis data sets and phantom models. A user friendly graphical user interface (GUI) helps users to select and run the desired methods on the designed phantom models or real data sets. The simulator has been tested on a phantom study that simulates breast tomosynthesis imaging problem. Results obtained with various methods including algebraic reconstruction technique (ART) and total variation regularized reconstruction techniques (ART+TV) are presented. Reconstruction results of the methods are compared both visually and quantitatively by evaluating performances of the methods using mean structural similarity (MSSIM) values.

  13. [Pre-surgical simulation of microvascular decompression for hemifacial spasm using 3D-models].

    PubMed

    Mashiko, Toshihiro; Yang, Qiang; Kaneko, Naoki; Konno, Takehiko; Yamaguchi, Takashi; Watanabe, Eiju

    2015-01-01

    We have been performing pre-surgical simulations using custom-built patient-specific 3D-models. Here we report the advantageous use of 3D-models for simulating microvascular decompression(MVD)for hemifacial spasms. Seven cases of MVD surgery were performed. Two types of 3D-printers were used to fabricate the 3D-models:one using plaster as the modeling material(Z Printer®450, 3D systems, Rock Hill, SC, USA)and the other using acrylonitrile butadiene styrene(ABS)(UP! Plus 3D printer®, Beijing Tiertime Technology, Beijing). We tested three types of models. Type 1 was a plaster model of the brainstem, cerebellum, facial nerve, and the artery compressing the root exit zone of the facial nerve. Part of the cerebellum was digitally trimmed off to observe "the compressing point" from the same angle as that used during actual surgery. Type 2 was a modified Type 1 in which part of the skull was opened digitally to mimic a craniectomy. Type 3 was a combined model in which the cerebellum and the artery of the Type 2 model were replaced by a soft retractable cerebellum and an elastic artery. The cerebellum was made from polyurethane and cast from a plaster prototype. To fabricate elastic arteries, liquid silicone was painted onto the surface of an ABS artery and the inner ABS model was dissolved away using solvent. In all cases, the 3D-models were very useful. Although each type has advantages, the Type-3 model was judged extremely useful for training junior surgeons in microsurgical approaches.

  14. Three dimensional thermal-solute phase field simulation of binary alloy solidification

    NASA Astrophysics Data System (ADS)

    Bollada, P. C.; Goodyer, C. E.; Jimack, P. K.; Mullis, A. M.; Yang, F. W.

    2015-04-01

    We employ adaptive mesh refinement, implicit time stepping, a nonlinear multigrid solver and parallel computation to solve a multi-scale, time dependent, three dimensional, nonlinear set of coupled partial differential equations for three scalar field variables. The mathematical model represents the non-isothermal solidification of a metal alloy into a melt substantially cooled below its freezing point at the microscale. Underlying physical molecular forces are captured at this scale by a specification of the energy field. The time rate of change of the temperature, alloy concentration and an order parameter to govern the state of the material (liquid or solid) are controlled by the diffusion parameters and variational derivatives of the energy functional. The physical problem is important to material scientists for the development of solid metal alloys and, hitherto, this fully coupled thermal problem has not been simulated in three dimensions, due to its computationally demanding nature. By bringing together state of the art numerical techniques this problem is now shown here to be tractable at appropriate resolution with relatively moderate computational resources.

  15. The Vajont disaster: a 3D numerical simulation for the slide and the waves

    NASA Astrophysics Data System (ADS)

    Rubino, Angelo; Androsov, Alexey; Vacondio, Renato; Zanchettin, Davide; Voltzinger, Naum

    2016-04-01

    A very high resolution O(5 m), 3D hydrostatic nonlinear numerical model was used to simulate the dynamics of both the slide and the surface waves produced during the Vajont disaster (north Italy, 1963), one of the major landslide-induced tsunamis ever documented. Different simulated wave phenomena like, e.g., maximum run-up on the opposite shore, maximum height, and water velocity were analyzed and compared with data available in literature, including the results of a fully 3D simulation obtained with a Smoothed Particle Hydrodynamic code. The difference between measured and simulated after-slide bathymetries was calculated and used in an attempt to quantify the relative magnitude and extension of rigid and fluid motion components during the event.

  16. The computer simulation of 3d gas dynamics in a gas centrifuge

    NASA Astrophysics Data System (ADS)

    Borman, V. D.; Bogovalov, S. V.; Borisevich, V. D.; Tronin, I. V.; Tronin, V. N.

    2016-09-01

    We argue on the basis of the results of 2D analysis of the gas flow in gas centrifuges that a reliable calculation of the circulation of the gas and gas content in the gas centrifuge is possible only in frameworks of 3D numerical simulation of gas dynamics in the gas centrifuge (hereafter GC). The group from National research nuclear university, MEPhI, has created a computer code for 3D simulation of the gas flow in GC. The results of the computer simulations of the gas flows in GC are presented. A model Iguassu centrifuge is explored for the simulations. A nonaxisymmetric gas flow is produced due to interaction of the hypersonic rotating flow with the scoops for extraction of the product and waste flows from the GC. The scoops produce shock waves penetrating into a working camera of the GC and form spiral waves there.

  17. 3D Radiative Transfer in Eta Carinae: Application of the SimpleX Algorithm to 3D SPH Simulations of Binary Colliding Winds

    NASA Technical Reports Server (NTRS)

    Clementel, N.; Madura, T. I.; Kruip, C.J.H.; Icke, V.; Gull, T. R.

    2014-01-01

    Eta Carinae is an ideal astrophysical laboratory for studying massive binary interactions and evolution, and stellar wind-wind collisions. Recent three-dimensional (3D) simulations set the stage for understanding the highly complex 3D flows in eta Car. Observations of different broad high- and low-ionization forbidden emission lines provide an excellent tool to constrain the orientation of the system, the primary's mass-loss rate, and the ionizing flux of the hot secondary. In this work we present the first steps towards generating synthetic observations to compare with available and future HST/STIS data. We present initial results from full 3D radiative transfer simulations of the interacting winds in eta Car.We use the SimpleX algorithm to post-process the output from 3D SPH simulations and obtain the ionization fractions of hydrogen and helium assuming three different mass-loss rates for the primary star. The resultant ionization maps of both species constrain the regions where the observed forbidden emission lines can form. Including collisional ionization is necessary to achieve a better description of the ionization states, especially in the areas shielded from the secondary's radiation. We find that reducing the primary's mass-loss rate increases the volume of ionized gas, creating larger areas where the forbidden emission lines can form.We conclude that post processing 3D SPH data with SimpleX is a viable tool to create ionization maps for eta Car.

  18. 3D Radiative Transfer in Eta Carinae: Application of the SimpleX Algorithm to 3D SPH Simulations of Binary Colliding Winds

    NASA Technical Reports Server (NTRS)

    Clementel, N.; Madura, T. I.; Kruip, C. J. H.; Icke, V.; Gull, T. R.

    2014-01-01

    Eta Carinae is an ideal astrophysical laboratory for studying massive binary interactions and evolution, and stellar wind-wind collisions. Recent three-dimensional (3D) simulations set the stage for understanding the highly complex 3D flows in Eta Car. Observations of different broad high- and low-ionization forbidden emission lines provide an excellent tool to constrain the orientation of the system, the primary's mass-loss rate, and the ionizing flux of the hot secondary. In this work we present the first steps towards generating synthetic observations to compare with available and future HST/STIS data. We present initial results from full 3D radiative transfer simulations of the interacting winds in Eta Car. We use the SimpleX algorithm to post-process the output from 3D SPH simulations and obtain the ionization fractions of hydrogen and helium assuming three different mass-loss rates for the primary star. The resultant ionization maps of both species constrain the regions where the observed forbidden emission lines can form. Including collisional ionization is necessary to achieve a better description of the ionization states, especially in the areas shielded from the secondary's radiation. We find that reducing the primary's mass-loss rate increases the volume of ionized gas, creating larger areas where the forbidden emission lines can form. We conclude that post processing 3D SPH data with SimpleX is a viable tool to create ionization maps for Eta Car.

  19. Rise time of proton cut-off energy in 2D and 3D PIC simulations

    NASA Astrophysics Data System (ADS)

    Babaei, J.; Gizzi, L. A.; Londrillo, P.; Mirzanejad, S.; Rovelli, T.; Sinigardi, S.; Turchetti, G.

    2017-04-01

    The Target Normal Sheath Acceleration regime for proton acceleration by laser pulses is experimentally consolidated and fairly well understood. However, uncertainties remain in the analysis of particle-in-cell simulation results. The energy spectrum is exponential with a cut-off, but the maximum energy depends on the simulation time, following different laws in two and three dimensional (2D, 3D) PIC simulations so that the determination of an asymptotic value has some arbitrariness. We propose two empirical laws for the rise time of the cut-off energy in 2D and 3D PIC simulations, suggested by a model in which the proton acceleration is due to a surface charge distribution on the target rear side. The kinetic energy of the protons that we obtain follows two distinct laws, which appear to be nicely satisfied by PIC simulations, for a model target given by a uniform foil plus a contaminant layer that is hydrogen-rich. The laws depend on two parameters: the scaling time, at which the energy starts to rise, and the asymptotic cut-off energy. The values of the cut-off energy, obtained by fitting 2D and 3D simulations for the same target and laser pulse configuration, are comparable. This suggests that parametric scans can be performed with 2D simulations since 3D ones are computationally very expensive, delegating their role only to a correspondence check. In this paper, the simulations are carried out with the PIC code ALaDyn by changing the target thickness L and the incidence angle α, with a fixed a0 = 3. A monotonic dependence, on L for normal incidence and on α for fixed L, is found, as in the experimental results for high temporal contrast pulses.

  20. 3D range-modulator for scanned particle therapy: development, Monte Carlo simulations and experimental evaluation

    NASA Astrophysics Data System (ADS)

    Simeonov, Yuri; Weber, Uli; Penchev, Petar; Printz Ringbæk, Toke; Schuy, Christoph; Brons, Stephan; Engenhart-Cabillic, Rita; Bliedtner, Jens; Zink, Klemens

    2017-09-01

    The purpose of this work was to design and manufacture a 3D range-modulator for scanned particle therapy. The modulator is intended to create a highly conformal dose distribution with only one fixed energy, simultaneously reducing considerably the treatment time. As a proof of concept, a 3D range-modulator was developed for a spherical target volume with a diameter of 5 cm, placed at a depth of 25 cm in a water phantom. It consists of a large number of thin pins with a well-defined shape and different lengths to modulate the necessary shift of the Bragg peak. The 3D range-modulator was manufactured with a rapid prototyping technique. The FLUKA Monte Carlo package was used to simulate the modulating effect of the 3D range-modulator and the resulting dose distribution. For that purpose, a special user routine was implemented to handle its complex geometrical contour. Additionally, FLUKA was extended with the capability of intensity modulated scanning. To validate the simulation results, dose measurements were carried out at the Heidelberg Ion Beam Therapy Center with a 400.41 MeV/u 12C beam. The high resolution dosimetric measurements show a good agreement between simulated and measured dose distributions. Irradiation of the monoenergetic raster plan took 3 s, which is approximately 20 times shorter than a comparable plan with 16 different energies. The combination of only one energy and a 3D range-modulator leads to a tremendous decrease in irradiation time. ‘Interplay effects’, typical for moving targets and pencil beam scanning, can be immensely reduced or disappear completely, making the delivery of a homogeneous dose to moving targets more reliable. Combining high dose conformity, very good homogeneity and extremely short irradiation times, the 3D range-modulator is considered to become a clinically applicable method for very fast treatment of lung tumours.

  1. 3D Printing of Preoperative Simulation Models of a Splenic Artery Aneurysm: Precision and Accuracy.

    PubMed

    Takao, Hidemasa; Amemiya, Shiori; Shibata, Eisuke; Ohtomo, Kuni

    2017-05-01

    Three-dimensional (3D) printing is attracting increasing attention in the medical field. This study aimed to apply 3D printing to the production of hollow splenic artery aneurysm models for use in the simulation of endovascular treatment, and to evaluate the precision and accuracy of the simulation model. From 3D computed tomography (CT) angiography data of a splenic artery aneurysm, 10 hollow models reproducing the vascular lumen were created using a fused deposition modeling-type desktop 3D printer. After filling with water, each model was scanned using T2-weighted magnetic resonance imaging for the evaluation of the lumen. All images were coregistered, binarized, and then combined to create an overlap map. The cross-sectional area of the splenic artery aneurysm and its standard deviation (SD) were calculated perpendicular to the x- and y-axes. Most voxels overlapped among the models. The cross-sectional areas were similar among the models, with SDs <0.05 cm(2). The mean cross-sectional areas of the splenic artery aneurysm were slightly smaller than those calculated from the original mask images. The maximum mean cross-sectional areas calculated perpendicular to the x- and y-axes were 3.90 cm(2) (SD, 0.02) and 4.33 cm(2) (SD, 0.02), whereas those calculated from the original mask images were 4.14 cm(2) and 4.66 cm(2), respectively. The mean cross-sectional areas of the afferent artery were, however, almost the same as those calculated from the original mask images. The results suggest that 3D simulation modeling of a visceral artery aneurysm using a fused deposition modeling-type desktop 3D printer and computed tomography angiography data is highly precise and accurate. Copyright © 2017 The Association of University Radiologists. Published by Elsevier Inc. All rights reserved.

  2. XML-based 3D model visualization and simulation framework for dynamic models

    NASA Astrophysics Data System (ADS)

    Kim, Taewoo; Fishwick, Paul A.

    2002-07-01

    Relatively recent advances in computer technology enable us to create three-dimensional (3D) dynamic models and simulate them within a 3D web environment. The use of such models is especially valuable when teaching simulation, and the concepts behind dynamic models, since the models are made more accessible to the students. Students tend to enjoy a construction process in which they are able to employ their own cultural and aesthetic forms. The challenge is to create a language that allows for a grammar for modeling, while simultaneously permitting arbitrary presentation styles. For further flexibility, we need an effective way to represent and simulate dynamic models that can be shared by modelers over the Internet. We present an Extensible Markup Language (XML)-based framework that will guide a modeler in creating personalized 3D models, visualizing its dynamic behaviors, and simulating the created models. A model author will use XML files to represent geometries and topology of a dynamic model. Model Fusion Engine, written in Extensible Stylesheet Language Transformation (XSLT), expedites the modeling process by automating the creation of dynamic models with the user-defined XML files. Modelers can also link simulation programs with a created model to analyze the characteristics of the model. The advantages of this system lie in the education of modeling and simulating dynamic models, and in the exploitation of visualizing the dynamic model behaviors.

  3. GPU accelerated simulations of 3D deterministic particle transport using discrete ordinates method

    NASA Astrophysics Data System (ADS)

    Gong, Chunye; Liu, Jie; Chi, Lihua; Huang, Haowei; Fang, Jingyue; Gong, Zhenghu

    2011-07-01

    Graphics Processing Unit (GPU), originally developed for real-time, high-definition 3D graphics in computer games, now provides great faculty in solving scientific applications. The basis of particle transport simulation is the time-dependent, multi-group, inhomogeneous Boltzmann transport equation. The numerical solution to the Boltzmann equation involves the discrete ordinates ( Sn) method and the procedure of source iteration. In this paper, we present a GPU accelerated simulation of one energy group time-independent deterministic discrete ordinates particle transport in 3D Cartesian geometry (Sweep3D). The performance of the GPU simulations are reported with the simulations of vacuum boundary condition. The discussion of the relative advantages and disadvantages of the GPU implementation, the simulation on multi GPUs, the programming effort and code portability are also reported. The results show that the overall performance speedup of one NVIDIA Tesla M2050 GPU ranges from 2.56 compared with one Intel Xeon X5670 chip to 8.14 compared with one Intel Core Q6600 chip for no flux fixup. The simulation with flux fixup on one M2050 is 1.23 times faster than on one X5670.

  4. GPU accelerated simulations of 3D deterministic particle transport using discrete ordinates method

    SciTech Connect

    Gong Chunye; Liu Jie; Chi Lihua; Huang Haowei; Fang Jingyue; Gong Zhenghu

    2011-07-01

    Graphics Processing Unit (GPU), originally developed for real-time, high-definition 3D graphics in computer games, now provides great faculty in solving scientific applications. The basis of particle transport simulation is the time-dependent, multi-group, inhomogeneous Boltzmann transport equation. The numerical solution to the Boltzmann equation involves the discrete ordinates (S{sub n}) method and the procedure of source iteration. In this paper, we present a GPU accelerated simulation of one energy group time-independent deterministic discrete ordinates particle transport in 3D Cartesian geometry (Sweep3D). The performance of the GPU simulations are reported with the simulations of vacuum boundary condition. The discussion of the relative advantages and disadvantages of the GPU implementation, the simulation on multi GPUs, the programming effort and code portability are also reported. The results show that the overall performance speedup of one NVIDIA Tesla M2050 GPU ranges from 2.56 compared with one Intel Xeon X5670 chip to 8.14 compared with one Intel Core Q6600 chip for no flux fixup. The simulation with flux fixup on one M2050 is 1.23 times faster than on one X5670.

  5. Flow simulation in a 3D model of pig airways and connection to lung sounds

    NASA Astrophysics Data System (ADS)

    Kruse, Kara L.; Williams, Paul T.; Allgood, Glenn O.; Ward, Richard C.; Gleason, Shaun S.; Paulus, Michael J.; Munro, Nancy B.; Mahinthakumar, Gnanamanika; Narasimhan, Chandrasegaran; Hammersley, Jeffrey R.; Olson, Dan E.

    2001-08-01

    Fundamental to the understanding of the various transport processes within the respiratory system, airway fluid dynamics plays an important role in biomedical research. When air flows through the respiratory tract, it is constantly changing direction through a complex system of curved and bifurcating tubes. As a result, numerical simulations of the airflow through this tracheobronchial system must be capable of resolving such fluid dynamic phenomena as flow separation, recirculation, secondary flows due to centrifugal instabilities, and shear stress variation along the airway surface. Anatomic complexities within the tracheobronchial tree, such as sharp carinal regions at asymmetric bifurcations, have motivated the application of the incompressible Computational Fluid Dynamics code PHI3D to the modeling of airflow. Developed at ORNL, PHI3D implements the new Continuity Constraint Method. Using a finite-element methodology, complex geometries can be easily simulated with PHI3D using unstructured grids. A time- accurate integration scheme allows the simulation of both transient and steady-state flows. A realistic geometry model of the central airways for the fluid flow studies was obtained from pig lungs using a new high resolution x-ray computed tomography system developed at ORNL for generating 3D images of the internal structure of laboratory animals.

  6. Parallel implementation of 3D FFT with volumetric decomposition schemes for efficient molecular dynamics simulations

    NASA Astrophysics Data System (ADS)

    Jung, Jaewoon; Kobayashi, Chigusa; Imamura, Toshiyuki; Sugita, Yuji

    2016-03-01

    Three-dimensional Fast Fourier Transform (3D FFT) plays an important role in a wide variety of computer simulations and data analyses, including molecular dynamics (MD) simulations. In this study, we develop hybrid (MPI+OpenMP) parallelization schemes of 3D FFT based on two new volumetric decompositions, mainly for the particle mesh Ewald (PME) calculation in MD simulations. In one scheme, (1d_Alltoall), five all-to-all communications in one dimension are carried out, and in the other, (2d_Alltoall), one two-dimensional all-to-all communication is combined with two all-to-all communications in one dimension. 2d_Alltoall is similar to the conventional volumetric decomposition scheme. We performed benchmark tests of 3D FFT for the systems with different grid sizes using a large number of processors on the K computer in RIKEN AICS. The two schemes show comparable performances, and are better than existing 3D FFTs. The performances of 1d_Alltoall and 2d_Alltoall depend on the supercomputer network system and number of processors in each dimension. There is enough leeway for users to optimize performance for their conditions. In the PME method, short-range real-space interactions as well as long-range reciprocal-space interactions are calculated. Our volumetric decomposition schemes are particularly useful when used in conjunction with the recently developed midpoint cell method for short-range interactions, due to the same decompositions of real and reciprocal spaces. The 1d_Alltoall scheme of 3D FFT takes 4.7 ms to simulate one MD cycle for a virus system containing more than 1 million atoms using 32,768 cores on the K computer.

  7. 3D dynamic simulation of crack propagation in extracorporeal shock wave lithotripsy

    NASA Astrophysics Data System (ADS)

    Wijerathne, M. L. L.; Hori, Muneo; Sakaguchi, Hide; Oguni, Kenji

    2010-06-01

    Some experimental observations of Shock Wave Lithotripsy(SWL), which include 3D dynamic crack propagation, are simulated with the aim of reproducing fragmentation of kidney stones with SWL. Extracorporeal shock wave lithotripsy (ESWL) is the fragmentation of kidney stones by focusing an ultrasonic pressure pulse onto the stones. 3D models with fine discretization are used to accurately capture the high amplitude shear shock waves. For solving the resulting large scale dynamic crack propagation problem, PDS-FEM is used; it provides numerically efficient failure treatments. With a distributed memory parallel code of PDS-FEM, experimentally observed 3D photoelastic images of transient stress waves and crack patterns in cylindrical samples are successfully reproduced. The numerical crack patterns are in good agreement with the experimental ones, quantitatively. The results shows that the high amplitude shear waves induced in solid, by the lithotriptor generated shock wave, play a dominant role in stone fragmentation.

  8. The program FANS-3D (finite analytic numerical simulation 3-dimensional) and its applications

    NASA Technical Reports Server (NTRS)

    Bravo, Ramiro H.; Chen, Ching-Jen

    1992-01-01

    In this study, the program named FANS-3D (Finite Analytic Numerical Simulation-3 Dimensional) is presented. FANS-3D was designed to solve problems of incompressible fluid flow and combined modes of heat transfer. It solves problems with conduction and convection modes of heat transfer in laminar flow, with provisions for radiation and turbulent flows. It can solve singular or conjugate modes of heat transfer. It also solves problems in natural convection, using the Boussinesq approximation. FANS-3D was designed to solve heat transfer problems inside one, two and three dimensional geometries that can be represented by orthogonal planes in a Cartesian coordinate system. It can solve internal and external flows using appropriate boundary conditions such as symmetric, periodic and user specified.

  9. Simulations of 3D-Si sensors for the innermost layer of the ATLAS pixel upgrade

    NASA Astrophysics Data System (ADS)

    Baselga, M.; Pellegrini, G.; Quirion, D.

    2017-03-01

    The LHC is expected to reach luminosities up to 3000 fb-1 and the innermost layer of the ATLAS upgrade plans to cope with higher occupancy and to decrease the pixel size. 3D-Si sensors are a good candidate for the innermost layer of the ATLAS pixel upgrade since they exhibit good performance under high fluences and the new designs will have smaller pixel size to fulfill the electronics expectations. This paper reports TCAD simulations of the 3D-Si sensors designed at IMB-CNM with non-passing-through columns that are being fabricated for the next innermost layer of the ATLAS pixel upgrade. It shows the charge collection response before and after irradiation, and the response of 3D-Si sensors located at large η angles.

  10. Magnetic Dissipation in Asymmetric Strong Guide 3D Simulations: Examples of Magnetic Diffusion and Reconnection

    NASA Astrophysics Data System (ADS)

    Scudder, J. D.; Karimabadi, H.; Daughton, W. S.

    2013-12-01

    Interpretations of 2D simulations of magnetic reconnection are greatly simplified by using the flux function, usually the out of plane component of the vector potential. This theoretical device is no longer available when simulations are analyzed in 3-D. We illustrate the results of determining the locale rates of flux slippage in simulations by a technique based on Maxwell's equations. The technique recovers the usual results obtained for the flux function in 2D simulations, but remains viable in 3D simulations where there is no flux function. The method has also been successfully tested for full PIC simulations where reconnection is geometrically forbiddden. While such layers possess measurable flux slippages (diffusion) their level is not as strong as recorded in known 2D PIC reconnection sites using the same methodology. This approach will be used to explore the spatial incidence and strength of flux slippages across a 3D, asymmetric, strong guide field run discussed previously in the literature. Regions of diffusive behavior are illustrated where LHDI has been previously identified out on the separatrices, while much stronger flux slippages, typical of the X-regions of 2D simulations, are shown to occur elsewhere throughout the simulation. These results suggest that reconnection requires sufficiently vigorous flux slippage to be self sustaining, while non-zero flux slippage can and does occur without being at the reconnection site. A cross check of this approach is provided by the mixing ratio of tagged simulation particles of known spatial origin discussed by Daughton et al., 2013 (this meeting); they provide an integral measure of flux slippage up to the present point in the simulation. We will discuss the correlations between our Maxwell based flux slippage rates and the inferred rates of change of this mixing ratio (as recorded in the local fluid frame).

  11. 3-D land subsidence simulation using the NDIS package for MODFLOW

    NASA Astrophysics Data System (ADS)

    Kang, D. H.; Li, J.

    2015-11-01

    The standard subsidence package for MODFLOW, MODFLOW-SUB simulates aquifer-system compaction and subsidence assuming that only 1-D-vertical displacement of the aquifer system occurs in response to applied stresses such as drawdowns accompanying groundwater extraction. In the present paper, 3-D movement of an aquifer system in responses to one or more pumping wells is considered using the new aquifer-system deformation package for MODFLOW, NDIS. The simulation of aquifer- system 3-D movement using NDIS was conducted with a stress or hydraulic head dependent specific storage coefficient to simulate nonlinear deformation behavior of aquifer-system sedimentary materials. NDIS's numerical simulation for aquifer horizontal movement is consistent with an analytic solution for horizontal motion in response to pumping from a leaky confined aquifer (Li, 2007). For purposes of comparison, vertical subsidence of the aquifer system in response to groundwater pumping is simulated by the both the NDIS and MODFLOW-SUB models. The results of the simulations show that land subsidence simulated by MODFLOW-SUB is significantly larger and less sensitive to pumping rate and time than that simulated by NDIS. The NDIS simulations also suggest that if the total pumpage is the same, pumping from a single well may induce more land subsidence than pumping from multiple wells.

  12. Simulation of bootstrap current in 2D and 3D ideal magnetic fields in tokamaks

    NASA Astrophysics Data System (ADS)

    Raghunathan, M.; Graves, J. P.; Cooper, W. A.; Pedro, M.; Sauter, O.

    2016-09-01

    We aim to simulate the bootstrap current for a MAST-like spherical tokamak using two approaches for magnetic equilibria including externally caused 3D effects such as resonant magnetic perturbations (RMPs), the effect of toroidal ripple, and intrinsic 3D effects such as non-resonant internal kink modes. The first approach relies on known neoclassical coefficients in ideal MHD equilibria, using the Sauter (Sauter et al 1999 Phys. Plasmas 6 2834) expression valid for all collisionalities in axisymmetry, and the second approach being the quasi-analytic Shaing-Callen (Shaing and Callen 1983 Phys. Fluids 26 3315) model in the collisionless regime for 3D. Using the ideal free-boundary magnetohydrodynamic code VMEC, we compute the flux-surface averaged bootstrap current density, with the Sauter and Shaing-Callen expressions for 2D and 3D ideal MHD equilibria including an edge pressure barrier with the application of resonant magnetic perturbations, and equilibria possessing a saturated non-resonant 1/1 internal kink mode with a weak internal pressure barrier. We compare the applicability of the self-consistent iterative model on the 3D applications and discuss the limitations and advantages of each bootstrap current model for each type of equilibrium.

  13. Phase-field simulation of the stability of reaction phases at UO2/β-Zr interface

    NASA Astrophysics Data System (ADS)

    Nishida, Yuki; Tsukada, Yuhki; Koyama, Toshiyuki; Kurata, Masaki

    2015-11-01

    The stability of reaction phases at the UO2/Zr (β-Zr) interface in the O-U-Zr system was simulated by a newly constructed multi-phase-field model. At the UO2/Zr (β-Zr) interface, we assumed a liquid phase and an α-Zr (Hcp) phase. The phase growths and atomic diffusions of the constituent elements were simultaneously calculated in one-dimensional simulations. During isothermal aging at 1500 °C and 1600 °C, the thicknesses of both reaction phases increased. As O diffused much faster than U, O concentration increased immediately in the α-Zr (Hcp) phase. On account of its high O concentration, the α-Zr (Hcp) phase rapidly expanded toward the β-Zr (Bcc) side, blocking the diffusion of U from the liquid phase to the β-Zr (Bcc) phase. The stability of the liquid phase was influenced by the U concentration in the liquid phase and was correlated to the growth of the α-Zr (Hcp) phase that was accelerated by the diffusion of O from UO2 to the α-Zr (Hcp) phase.

  14. The simulation of 3D microcalcification clusters in 2D digital mammography and breast tomosynthesis

    SciTech Connect

    Shaheen, Eman; Van Ongeval, Chantal; Zanca, Federica; Cockmartin, Lesley; Marshall, Nicholas; Jacobs, Jurgen; Young, Kenneth C.; Dance, David R.; Bosmans, Hilde

    2011-12-15

    Purpose: This work proposes a new method of building 3D models of microcalcification clusters and describes the validation of their realistic appearance when simulated into 2D digital mammograms and into breast tomosynthesis images. Methods: A micro-CT unit was used to scan 23 breast biopsy specimens of microcalcification clusters with malignant and benign characteristics and their 3D reconstructed datasets were segmented to obtain 3D models of microcalcification clusters. These models were then adjusted for the x-ray spectrum used and for the system resolution and simulated into 2D projection images to obtain mammograms after image processing and into tomographic sequences of projection images, which were then reconstructed to form 3D tomosynthesis datasets. Six radiologists were asked to distinguish between 40 real and 40 simulated clusters of microcalcifications in two separate studies on 2D mammography and tomosynthesis datasets. Receiver operating characteristic (ROC) analysis was used to test the ability of each observer to distinguish between simulated and real microcalcification clusters. The kappa statistic was applied to assess how often the individual simulated and real microcalcification clusters had received similar scores (''agreement'') on their realistic appearance in both modalities. This analysis was performed for all readers and for the real and the simulated group of microcalcification clusters separately. ''Poor'' agreement would reflect radiologists' confusion between simulated and real clusters, i.e., lesions not systematically evaluated in both modalities as either simulated or real, and would therefore be interpreted as a success of the present models. Results: The area under the ROC curve, averaged over the observers, was 0.55 (95% confidence interval [0.44, 0.66]) for the 2D study, and 0.46 (95% confidence interval [0.29, 0.64]) for the tomosynthesis study, indicating no statistically significant difference between real and simulated

  15. The simulation of 3D microcalcification clusters in 2D digital mammography and breast tomosynthesis.

    PubMed

    Shaheen, Eman; Van Ongeval, Chantal; Zanca, Federica; Cockmartin, Lesley; Marshall, Nicholas; Jacobs, Jurgen; Young, Kenneth C; R Dance, David; Bosmans, Hilde

    2011-12-01

    This work proposes a new method of building 3D models of microcalcification clusters and describes the validation of their realistic appearance when simulated into 2D digital mammograms and into breast tomosynthesis images. A micro-CT unit was used to scan 23 breast biopsy specimens of microcalcification clusters with malignant and benign characteristics and their 3D reconstructed datasets were segmented to obtain 3D models of microcalcification clusters. These models were then adjusted for the x-ray spectrum used and for the system resolution and simulated into 2D projection images to obtain mammograms after image processing and into tomographic sequences of projection images, which were then reconstructed to form 3D tomosynthesis datasets. Six radiologists were asked to distinguish between 40 real and 40 simulated clusters of microcalcifications in two separate studies on 2D mammography and tomosynthesis datasets. Receiver operating characteristic (ROC) analysis was used to test the ability of each observer to distinguish between simulated and real microcalcification clusters. The kappa statistic was applied to assess how often the individual simulated and real microcalcification clusters had received similar scores ("agreement") on their realistic appearance in both modalities. This analysis was performed for all readers and for the real and the simulated group of microcalcification clusters separately. "Poor" agreement would reflect radiologists' confusion between simulated and real clusters, i.e., lesions not systematically evaluated in both modalities as either simulated or real, and would therefore be interpreted as a success of the present models. The area under the ROC curve, averaged over the observers, was 0.55 (95% confidence interval [0.44, 0.66]) for the 2D study, and 0.46 (95% confidence interval [0.29, 0.64]) for the tomosynthesis study, indicating no statistically significant difference between real and simulated lesions (p > 0.05). Agreement

  16. A fast convolution-based methodology to simulate 2-D/3-D cardiac ultrasound images.

    PubMed

    Gao, Hang; Choi, Hon Fai; Claus, Piet; Boonen, Steven; Jaecques, Siegfried; Van Lenthe, G Harry; Van der Perre, Georges; Lauriks, Walter; D'hooge, Jan

    2009-02-01

    This paper describes a fast convolution-based methodology for simulating ultrasound images in a 2-D/3-D sector format as typically used in cardiac ultrasound. The conventional convolution model is based on the assumption of a space-invariant point spread function (PSF) and typically results in linear images. These characteristics are not representative for cardiac data sets. The spatial impulse response method (IRM) has excellent accuracy in the linear domain; however, calculation time can become an issue when scatterer numbers become significant and when 3-D volumetric data sets need to be computed. As a solution to these problems, the current manuscript proposes a new convolution-based methodology in which the data sets are produced by reducing the conventional 2-D/3-D convolution model to multiple 1-D convolutions (one for each image line). As an example, simulated 2-D/3-D phantom images are presented along with their gray scale histogram statistics. In addition, the computation time is recorded and contrasted to a commonly used implementation of IRM (Field II). It is shown that COLE can produce anatomically plausible images with local Rayleigh statistics but at improved calculation time (1200 times faster than the reference method).

  17. Development of discrete gas kinetic scheme for simulation of 3D viscous incompressible and compressible flows

    NASA Astrophysics Data System (ADS)

    Yang, L. M.; Shu, C.; Wang, Y.; Sun, Y.

    2016-08-01

    The sphere function-based gas kinetic scheme (GKS), which was presented by Shu and his coworkers [23] for simulation of inviscid compressible flows, is extended to simulate 3D viscous incompressible and compressible flows in this work. Firstly, we use certain discrete points to represent the spherical surface in the phase velocity space. Then, integrals along the spherical surface for conservation forms of moments, which are needed to recover 3D Navier-Stokes equations, are approximated by integral quadrature. The basic requirement is that these conservation forms of moments can be exactly satisfied by weighted summation of distribution functions at discrete points. It was found that the integral quadrature by eight discrete points on the spherical surface, which forms the D3Q8 discrete velocity model, can exactly match the integral. In this way, the conservative variables and numerical fluxes can be computed by weighted summation of distribution functions at eight discrete points. That is, the application of complicated formulations resultant from integrals can be replaced by a simple solution process. Several numerical examples including laminar flat plate boundary layer, 3D lid-driven cavity flow, steady flow through a 90° bending square duct, transonic flow around DPW-W1 wing and supersonic flow around NACA0012 airfoil are chosen to validate the proposed scheme. Numerical results demonstrate that the present scheme can provide reasonable numerical results for 3D viscous flows.

  18. Lorentz boosted frame simulation of Laser wakefield acceleration in quasi-3D geometry

    NASA Astrophysics Data System (ADS)

    Yu, Peicheng; Xu, Xinlu; Davidson, Asher; Tableman, Adam; Meyers, Michael; Dalichaouch, Thamine; Tsung, Frank; Decyk, Viktor; Fiuza, Frederico; Vieira, Jorge; Fonseca, Ricardo; Lu, Wei; Silva, Luis; Mori, Warren

    2015-11-01

    We present results on a systematic study of Particle-In-Cell simulation of Laser Wakefield Acceleration (LWFA) by combining the Lorentz boosted frame technique with the quasi-3D algorithm, in which fields are expanded into azimuthal harmonics and solved on an r - z PIC grid keeping only a few harmonics. The studies emphasize on LWFA in the nonlinear blowout regime, which is more challenging from a computational standpoint. We first discuss strategies for eliminating the numerical Cerenkov instability (NCI) that inevitably arises due to the presence of plasma drifting across the grid with relativistic speeds in quasi-3D geometry. These strategies work for FFT based Maxwell solvers. We have incorporated these mitigation strategies into our PIC code OSIRIS by adding a new hybrid Yee-FFT Maxwell solver. With these strategies, OSIRIS can now be used to combine the quasi-3D algorithm and Lorentz boosted frame technique, and carry out high fidelity LWFA boosted frame simulation with no evidence of the NCI in the quasi-3D geometry, leading to unprecedented speedups. Work supported by NSF and DOE.

  19. Numerical simulation of 3D boundary-driven acoustic streaming in microfluidic devices.

    PubMed

    Lei, Junjun; Hill, Martyn; Glynne-Jones, Peter

    2014-02-07

    This article discusses three-dimensional (3D) boundary-driven streaming in acoustofluidic devices. Firstly, the 3D Rayleigh streaming pattern in a microchannel is simulated and its effect on the movement of microparticles of various sizes is demonstrated. The results obtained from this model show good comparisons with 3D experimental visualisations and demonstrate the fully 3D nature of the acoustic streaming field and the associated acoustophoretic motion of microparticles in acoustofluidic devices. This method is then applied to another acoustofluidic device in order to gain insights into an unusual in-plane streaming pattern. The origin of this streaming has not been fully described and its characteristics cannot be explained from the classical theory of Rayleigh streaming. The simulated in-plane streaming pattern was in good agreement with the experimental visualisation. The mechanism behind it is shown to be related to the active sound intensity field, which supports our previous findings on the mechanism of the in-plane acoustic streaming pattern visualised and modelled in a thin-layered capillary device.

  20. Real-time 3D radiation risk assessment supporting simulation of work in nuclear environments.

    PubMed

    Szőke, I; Louka, M N; Bryntesen, T R; Bratteli, J; Edvardsen, S T; RøEitrheim, K K; Bodor, K

    2014-06-01

    This paper describes the latest developments at the Institute for Energy Technology (IFE) in Norway, in the field of real-time 3D (three-dimensional) radiation risk assessment for the support of work simulation in nuclear environments. 3D computer simulation can greatly facilitate efficient work planning, briefing, and training of workers. It can also support communication within and between work teams, and with advisors, regulators, the media and public, at all the stages of a nuclear installation's lifecycle. Furthermore, it is also a beneficial tool for reviewing current work practices in order to identify possible gaps in procedures, as well as to support the updating of international recommendations, dissemination of experience, and education of the current and future generation of workers.IFE has been involved in research and development into the application of 3D computer simulation and virtual reality (VR) technology to support work in radiological environments in the nuclear sector since the mid 1990s. During this process, two significant software tools have been developed, the VRdose system and the Halden Planner, and a number of publications have been produced to contribute to improving the safety culture in the nuclear industry.This paper describes the radiation risk assessment techniques applied in earlier versions of the VRdose system and the Halden Planner, for visualising radiation fields and calculating dose, and presents new developments towards implementing a flexible and up-to-date dosimetric package in these 3D software tools, based on new developments in the field of radiation protection. The latest versions of these 3D tools are capable of more accurate risk estimation, permit more flexibility via a range of user choices, and are applicable to a wider range of irradiation situations than their predecessors.

  1. 3D thermal modeling of TRISO fuel coupled with neutronic simulation

    SciTech Connect

    Hu, Jianwei; Uddin, Rizwan

    2010-01-01

    The Very High Temperature Gas Reactor (VHTR) is widely considered as one of the top candidates identified in the Next Generation Nuclear Power-plant (NGNP) Technology Roadmap under the U.S . Depanment of Energy's Generation IV program. TRlSO particle is a common element among different VHTR designs and its performance is critical to the safety and reliability of the whole reactor. A TRISO particle experiences complex thermo-mechanical changes during reactor operation in high temperature and high burnup conditions. TRISO fuel performance analysis requires evaluation of these changes on micro scale. Since most of these changes are temperature dependent, 3D thermal modeling of TRISO fuel is a crucial step of the whole analysis package. In this paper, a 3D numerical thermal model was developed to calculate temperature distribution inside TRISO and pebble under different scenarios. 3D simulation is required because pebbles or TRISOs are always subjected to asymmetric thermal conditions since they are randomly packed together. The numerical model was developed using finite difference method and it was benchmarked against ID analytical results and also results reported from literature. Monte-Carlo models were set up to calculate radial power density profile. Complex convective boundary condition was applied on the pebble outer surface. Three reactors were simulated using this model to calculate temperature distribution under different power levels. Two asymmetric boundary conditions were applied to the pebble to test the 3D capabilities. A gas bubble was hypothesized inside the TRISO kernel and 3D simulation was also carried out under this scenario. Intuition-coherent results were obtained and reported in this paper.

  2. A cut cell method for the 3D simulation of Crookes radiometer

    SciTech Connect

    Dechriste, Guillaume; Mieussens, Luc

    2014-12-09

    Devices involved in engineering applications, such as vacuum pumps or MEMS, may be made of several moving parts. This raise the issue of the simulation of rarefied gas flow around moving boundaries. We propose a simple process, known as cut cell method, to treat the motion of a solid body in the framework of the deterministic solving of a kinetic equation. Up to our knowledge, this is the first time that this approach has been used for this kind of simulations. The method is illustrated by the 2D and 3D simulations of a Crookes radiometer.

  3. Determination of key parameters of SEU occurrence using 3-D full cell SRAM simulations

    SciTech Connect

    Roche, P.; Palau, J.M.; Bruguier, G.; Tavernier, C.; Ecoffet, R.; Gasiot, J.

    1999-12-01

    A 3-D entire SRAM cell, based on a 0.35-{micro}m current CMOS technology, is simulated in this work with a DEVICE simulator. The transient current, resulting from a heavy ion strike in the most sensitive region of the cell, is studied as a function of the LET value, the cell layout and the ion penetration depth. A definition of the critical charge is proposed and two new methods are presented to compute this basic amount of charge only using SPICE simulations. Numerical applications are performed with two different generations of submicron CMOS technologies, including the determination of the sensitive thicknesses.

  4. A cut cell method for the 3D simulation of Crookes radiometer

    NASA Astrophysics Data System (ADS)

    Dechriste, Guillaume; Mieussens, Luc

    2014-12-01

    Devices involved in engineering applications, such as vacuum pumps or MEMS, may be made of several moving parts. This raise the issue of the simulation of rarefied gas flow around moving boundaries. We propose a simple process, known as cut cell method, to treat the motion of a solid body in the framework of the deterministic solving of a kinetic equation. Up to our knowledge, this is the first time that this approach has been used for this kind of simulations. The method is illustrated by the 2D and 3D simulations of a Crookes radiometer.

  5. Reactive Flow Modeling of Liquid Explosives via ALE3D/Cheetah Simulations

    SciTech Connect

    Kuo, I W; Bastea, S; Fried, L E

    2010-03-10

    We carried out reactive flow simulations of liquid explosives such as nitromethane using the hydrodynamic code ALE3D coupled with equations of state and reaction kinetics modeled by the thermochemical code Cheetah. The simulation set-up was chosen to mimic cylinder experiments. For pure unconfined nitromethane we find that the failure diameter and detonation velocity dependence on charge diameter are in agreement with available experimental results. Such simulations are likely to be useful for determining detonability and failure behavior for a wide range of experimental conditions and explosive compounds.

  6. A 3D virtual reality simulator for training of minimally invasive surgery.

    PubMed

    Mi, Shao-Hua; Hou, Zeng-Gunag; Yang, Fan; Xie, Xiao-Liang; Bian, Gui-Bin

    2014-01-01

    For the last decade, remarkable progress has been made in the field of cardiovascular disease treatment. However, these complex medical procedures require a combination of rich experience and technical skills. In this paper, a 3D virtual reality simulator for core skills training in minimally invasive surgery is presented. The system can generate realistic 3D vascular models segmented from patient datasets, including a beating heart, and provide a real-time computation of force and force feedback module for surgical simulation. Instruments, such as a catheter or guide wire, are represented by a multi-body mass-spring model. In addition, a realistic user interface with multiple windows and real-time 3D views are developed. Moreover, the simulator is also provided with a human-machine interaction module that gives doctors the sense of touch during the surgery training, enables them to control the motion of a virtual catheter/guide wire inside a complex vascular model. Experimental results show that the simulator is suitable for minimally invasive surgery training.

  7. Comparison of flow and transport experiments on 3D printed 'rocks' with direct numerical simulations

    NASA Astrophysics Data System (ADS)

    Watson, F. E.; Geiger, S.; Mackay, E.; Singleton, M.; McGravie, T.; Anouilh, T.; Jobe, D.; Zhang, S.; Agar, S. M.; Ishutov, S.; Hasiuk, F.; Chalaturnyk, R. J.

    2016-12-01

    3D printing technology has the potential to revolutionise modelling of fluid flow and mass transport in porous media. Using 3D printing to replicate pore geometries from real rocks quickly and cheaply, and being able to assign specific properties to the samples, would enable us to repeat experiments where things such as permeability, porosity, reactivity, or wettability are known a priori. Destructive tests, such as reactive transport experiments, could then be performed using the same, realistic, initial geometry, in a repeatable fashion; in addition, specific properties of the porous media (e.g. the reactivity of individual grains) could be altered in a controlled way. Similarly, two-phase flow experiments could be carried out where relevant properties (e.g. individual grain wettability) are modified between experiments. Results from such experiments would shed new light on key physio-chemical processes occurring at the pore-scale during multi-phase reactive flow and would allow us to validate the suite of emerging direct numerical simulation techniques (e.g. Lattice Boltzman, Volume of Fluid) currently used to model pore-scale flow and transport. We have developed a novel experimental setup to investigate single-phase flow and transport through translucent 3D printed and Perspex samples and to visualise the experiments for comparison with numerical simulations. Dyed fluid is injected at one end of the sample and the behaviour of the system is recorded using a digital camera situated directly above it. Image processing techniques are employed to quantify dye concentration and location through time. We use the finite volume method to simulate the flow experiments in OpenFOAM, using the same input geometry that was used to print the sample. Comparison of experimental results with simulations enables us to identify similarities and differences between flow and transport observed in the 3D printed samples and behaviour expected from the numerical simulations.

  8. 3D modeling and simulation of 2G HTS stacks and coils

    NASA Astrophysics Data System (ADS)

    Zermeño, Víctor M. R.; Grilli, Francesco

    2014-04-01

    Use of 2G HTS coated conductors in several power applications has become popular in recent years. Their large current density under high magnetic fields makes them suitable candidates for high power capacity applications such as stacks of tapes, coils, magnets, cables and current leads. For this reason, modeling and simulation of their electromagnetic properties is very desirable in the design and optimization processes. For many applications, when symmetries allow it, simple models consisting of 1D or 2D representations are well suited for providing a satisfying description of the problem at hand. However, certain designs such as racetrack coils and finite-length or non-straight stacks, do pose a 3D problem that cannot be easily reduced to a 2D configuration. Full 3D models have been developed, but their use for simulating superconducting devices is a very challenging task involving a large-scale computational problem. In this work, we present a new method to simulate the electromagnetic transient behavior of 2G HTS stacks and coils. The method, originally used to model stacks of straight superconducting tapes or circular coils in 2D, is now extended to 3D. The main idea is to construct an anisotropic bulk-like equivalent for the stack or coil, such that the geometrical layout of the internal alternating structures of insulating, metallic, superconducting and substrate layers is reduced while keeping the overall electromagnetic behavior of the original device. Besides the aforementioned interest in modeling and simulating 2G HTS coated conductors, this work provides a further step towards efficient 3D modeling and simulation of superconducting devices for large-scale applications.

  9. Characteristics of tumor and host cells in 3-D simulated microgravity environment

    NASA Astrophysics Data System (ADS)

    Chopra, V.; Dinh, T.; Wood, T.; Pellis, N.; Hannigan, E.

    Co-cultures of three-dimensional (3-D) constructs of one cell type with dispersed cells of a second cell type in low-shear rotating suspension cultures in simulated microgravity environment have been used to investigate invasive properties of normal and malignant cell types. We have shown that the epithelial and endothelial cells undergo a switch in characteristics when grown in an in vitro 3-D environment, that mimics the in vivo host environment as compared with conventional two-dimensional (2-D) monolayer cultures. Histological preparations and immunohistochemical staining procedures of cocultured harvests demonstrated various markers of interest: like collagen vimentin, mucin, elastin, fibrin, fibrinogen, cytokeratin, adhesion molecules and various angiogenic factors by tumor cells from gynecological cancer patients along with fibroblasts, endothelial cells and patient-derived mononuclear cells (n=8). The growth rate was enhanced 10-15 folds by 3-D cocultures of patient-derived cells as compared with 2-D monolayer cultures and 3-D monocultures. The production of interleukin-2, interleukin-6, interleukin -8, vascular endothelial cell growth factor, basic fibroblast growth factor, and angiogenin was studied by using ELISA and RT- PCR. Human umbilical vein-derived endothelial cell (HUVEC) were used to study the mitogenic response of the conditioned medium collected from 3-D monocultures and cocultures during proliferation and migration assays. The conditioned medium collected from 3-D cocultures of cancer cells also 1) increased the expression of message levels of vascular endothelial growth factor and its receptor flt-1 and KDR was observed by HUVEC, and 2) increased the expression of intracellular and vascular cell adhesion molecules on the surface of HUVEC, when measured by using Live cell ELISA assays and immunofluorescent staining as compared with 3-D monocultures of normal epithelial cells. There was an increase in production of 1) enzymatic activity that

  10. Momentum Transport: 2D and 3D Cloud Resolving Model Simulations

    NASA Technical Reports Server (NTRS)

    Tao, Wei-Kuo

    2001-01-01

    The major objective of this study is to investigate the momentum budgets associated with several convective systems that developed during the TOGA COARE IOP (west Pacific warm pool region) and GATE (east Atlantic region). The tool for this study is the improved Goddard Cumulas Ensemble (GCE) model which includes a 3-class ice-phase microphysical scheme, explicit cloud radiative interactive processes and air-sea interactive surface processes. The model domain contains 256 x 256 grid points (with 2 km resolution) in the horizontal and 38 grid points (to a depth of 22 km) in the vertical. The 2D domain has 1024 grid points. The simulations were performed over a 7-day time period (December 19-26, 1992, for TOGA COARE and September 1-7, 1994 for GATE). Cyclic literal boundary conditions are required for this type of long-term integration. Two well organized squall systems (TOGA, COARE February 22, 1993, and GATE September 12, 1994) were also simulated using the 3D GCE model. Only 9 h simulations were required to cover the life time of the squall systems. the lateral boundary conditions were open for these two squall systems simulations. the following will be examined: (1) the momentum budgets in the convective and stratiform regions, (2) the relationship between momentum transport and cloud organization (i.e., well organized squall lines versus less organized convective), (3) the differences and similarities in momentum transport between 2D and 3D simulated convective systems, and (4) the differences and similarities in momentum budgets between cloud systems simulated with open and cyclic lateral boundary conditions. Preliminary results indicate that there are only small differences between 2D and 3D simulated momentum budgets. Major differences occur, however, between momentum budgets associated with squall systems simulated using different lateral boundary conditions.

  11. Fabrication and evaluation of novel rabbit model cardiovascular simulator with 3D printer

    NASA Astrophysics Data System (ADS)

    Jang, Min; Lee, Min-Woo; Seo, See-Yoon; Shin, Sang-Hoon

    2017-03-01

    Simulators allow researchers to study the hemodynamics of the cardiovascular system in a reproducible way without using complicated equations. Previous simulators focused on heart functions. However, a detailed model of the vessels is required to replicate the pulse wave of the arterial system. A computer simulation was used to simplify the arterial branch because producing every small artery is neither possible nor necessary. A 3D-printed zig was used to make a hand-made arterial tree. The simulator that was developed was evaluated by comparing its results to in-vivo data, in terms of the hemodynamic parameters (waveform, augmentation index, impedance, etc.) that were measured at three points: the ascending aorta, the thoracic aorta, and the brachiocephalic artery. The results from the simulator showed good agreement with the in-vivo data. Therefore, this simulator can be used as a research tool for the cardiovascular study of animal models, specifically rabbits.

  12. Blob Dynamics in 3D BOUT Simulations of Tokamak Edge Turbulence

    SciTech Connect

    Russell, D; D'Ippolito, D; Myra, J; Nevins, W; Xu, X

    2004-08-23

    Propagating filaments of enhanced plasma density, or blobs, observed in 3D numerical simulations of a diverted, neutral-fueled tokamak are studied. Fluctuations of vorticity, electrical potential {phi}, temperature T{sub e} and current density J{sub {parallel}} associated with the blobs have a dipole structure perpendicular to the magnetic field and propagate radially with large E {center_dot} B drift velocities (> 1 km/s). The simulation results are consistent with a 3D blob dynamics model that incorporates increased parallel plasma resistivity (from neutral cooling of the X-point region), blob disconnection from the divertor sheath, X-point closure of the current loops, and collisional physics to sustain the {phi}, T{sub e}, J{sub {parallel}} dipoles.

  13. 3D SPH numerical simulation of the wave generated by the Vajont rockslide

    NASA Astrophysics Data System (ADS)

    Vacondio, R.; Mignosa, P.; Pagani, S.

    2013-09-01

    A 3D numerical modeling of the wave generated by the Vajont slide, one of the most destructive ever occurred, is presented in this paper. A meshless Lagrangian Smoothed Particle Hydrodynamics (SPH) technique was adopted to simulate the highly fragmented violent flow generated by the falling slide in the artificial reservoir. The speed-up achievable via General Purpose Graphic Processing Units (GP-GPU) allowed to adopt the adequate resolution to describe the phenomenon. The comparison with the data available in literature showed that the results of the numerical simulation reproduce satisfactorily the maximum run-up, also the water surface elevation in the residual lake after the event. Moreover, the 3D velocity field of the flow during the event and the discharge hydrograph which overtopped the dam, were obtained.

  14. 3D Kinetic Simulation of Plasma Jet Penetration in Magnetic Field

    NASA Astrophysics Data System (ADS)

    Galkin, Sergei A.; Bogatu, I. N.; Kim, J. S.

    2009-11-01

    A high velocity plasmoid penetration through a magnetic barrier is a problem of a great experimental and theoretical interest. Our LSP PIC code 3D fully kinetic numerical simulations of high density (10^16 cm-3) high velocity (30-140 km/sec) plasma jet/bullet, penetrating through the transversal magnetic field, demonstrate three different regimes: reflection by field, penetration by magnetic field expulsion and penetration by magnetic self-polarization. The behavior depends on plasma jet parameters and its composition: hydrogen, carbon (A=12) and C60-fullerene (A=720) plasmas were investigated. The 3D simulation of two plasmoid head-on injections along uniform magnetic field lines is analyzed. Mini rail plasma gun (accelerator) modeling is also presented and discussed.

  15. Co-located haptic and 3D graphic interface for medical simulations.

    PubMed

    Berkelman, Peter; Miyasaka, Muneaki; Bozlee, Sebastian

    2013-01-01

    We describe a system which provides high-fidelity haptic feedback in the same physical location as a 3D graphical display, in order to enable realistic physical interaction with virtual anatomical tissue during modelled procedures such as needle driving, palpation, and other interventions performed using handheld instruments. The haptic feedback is produced by the interaction between an array of coils located behind a thin flat LCD screen, and permanent magnets embedded in the instrument held by the user. The coil and magnet configuration permits arbitrary forces and torques to be generated on the instrument in real time according to the dynamics of the simulated tissue by activating the coils in combination. A rigid-body motion tracker provides position and orientation feedback of the handheld instrument to the computer simulation, and the 3D display is produced using LCD shutter glasses and a head-tracking system for the user.

  16. Stability of 3D Textile Composite Reinforcement Simulations: Solutions to Spurious Transverse Modes

    NASA Astrophysics Data System (ADS)

    Mathieu, S.; Hamila, N.; Dupé, F.; Descamps, C.; Boisse, P.

    2016-08-01

    The simulation of thick 3D composite reinforcement forming brings to light new modeling challenges. The specific anisotropic material behavior due to the possible slippage between fibers induces, among other phenomena, the development of spurious transverse modes in bending-dominated 3D simulations. To obtain coherent finite element responses, two solutions are proposed. The first one uses a simple assumed strain formulation usually prescribed to prevent volumetric locking. This solution avoids spurious transverse modes by stiffening of the hourglass modes. Nevertheless the deformation obtained by this approach still suffers from the inability of the standard continuum mechanics of Cauchy to describe fibrous material deformation. The second proposed approach is based on the introduction of a bending stiffness which both avoids the spurious transverse modes and also improves the global behavior of the element formulation by enriching the underlying continuum. To emphasize the differences between different formulations, element stiffnesses are explicitly calculated and compared.

  17. Modeling and 3-D Simulation of Biofilm Dynamics in Aqueous Environment

    NASA Astrophysics Data System (ADS)

    Wang, Qi

    2011-11-01

    We present a complex fluid model for biofilms growing in an aqueous environment. The modeling approach represents a new paradigm to develop models for biofilm-environment interaction that can be used to systematically incorporate refined chemical and physiological mechanisms. Special solutions of the model are presented and analyzed. 3-D numerical simulations in aqueous environment with emphasis on biofilm- ambient fluid interaction will be discussed in detail.

  18. Effectiveness Evaluation of Force Protection Training Using Computer-Based Instruction and X3d Simulation

    DTIC Science & Technology

    2007-09-01

    to growing operational constraints accelerated by the Global War on Terror, the United States Navy is looking for alternative methods of training to...accomplished efficiently and effectively, saving the U.S. Navy time and resources while maintaining a high state of readiness. The goal of this thesis is...COMPUTER-BASED INSTRUCTION AND X3D SIMULATION Wilfredo Cruzbaez Lieutenant, United States Navy B.A., Norfolk State University, 2001 Submitted in

  19. Coupled Crystal Plasticity-Phase Field Fracture Simulation Study on Damage Evolution Around a Void: Pore Shape Versus Crystallographic Orientation

    NASA Astrophysics Data System (ADS)

    Diehl, Martin; Wicke, Marcel; Shanthraj, Pratheek; Roters, Franz; Brueckner-Foit, Angelika; Raabe, Dierk

    2017-05-01

    Various mechanisms such as anisotropic plastic flow, damage nucleation, and crack propagation govern the overall mechanical response of structural materials. Understanding how these mechanisms interact, i.e. if they amplify mutually or compete with each other, is an essential prerequisite for the design of improved alloys. This study shows—by using the free and open source software DAMASK (the Düsseldorf Advanced Material Simulation Kit)—how the coupling of crystal plasticity and phase field fracture methods can increase the understanding of the complex interplay between crystallographic orientation and the geometry of a void. To this end, crack initiation and propagation around an experimentally obtained pore with complex shape is investigated and compared to the situation of a simplified spherical void. Three different crystallographic orientations of the aluminum matrix hosting the defects are considered. It is shown that crack initiation and propagation depend in a non-trivial way on crystallographic orientation and its associated plastic behavior as well as on the shape of the pore.

  20. Coupled Crystal Plasticity-Phase Field Fracture Simulation Study on Damage Evolution Around a Void: Pore Shape Versus Crystallographic Orientation

    NASA Astrophysics Data System (ADS)

    Diehl, Martin; Wicke, Marcel; Shanthraj, Pratheek; Roters, Franz; Brueckner-Foit, Angelika; Raabe, Dierk

    2017-03-01

    Various mechanisms such as anisotropic plastic flow, damage nucleation, and crack propagation govern the overall mechanical response of structural materials. Understanding how these mechanisms interact, i.e. if they amplify mutually or compete with each other, is an essential prerequisite for the design of improved alloys. This study shows—by using the free and open source software DAMASK (the Düsseldorf Advanced Material Simulation Kit)—how the coupling of crystal plasticity and phase field fracture methods can increase the understanding of the complex interplay between crystallographic orientation and the geometry of a void. To this end, crack initiation and propagation around an experimentally obtained pore with complex shape is investigated and compared to the situation of a simplified spherical void. Three different crystallographic orientations of the aluminum matrix hosting the defects are considered. It is shown that crack initiation and propagation depend in a non-trivial way on crystallographic orientation and its associated plastic behavior as well as on the shape of the pore.

  1. Phase-field simulations of the impact of bimodal pore size distributions on solid-state densification

    NASA Astrophysics Data System (ADS)

    Berry, Bruce E.; Millett, Paul C.

    2017-08-01

    The densification behavior of a porous body subjected to elevated temperature is relevant to many nuclear fuel performance metrics. The diffusional processes that govern such densification occur on microscopic length scales, and depend on the type of material and the nature of the porosity. In this study, we explore how bimodal pore size distributions impact diffusion-based densification relative to monomodal pore sizes for a given overall value of porosity. We utilize a Cahn-Hilliard phase-field model implemented with the MOOSE framework to simulate densification evolution with a range of overall porosities and a variety of porosity distributions between small and large pores. The results demonstrate that bimodal porosity can resist densification to a much greater extent than monomodal porosity. These findings have implications for the microstructural design of metallic nuclear fuels, in which an initial, bimodal porosity may resist early-stage densification and therefore provide collection sites for fission gases, thus reducing in-pile fission gas swelling.

  2. Understanding the mixing process in 3D microfluidic nozzle/diffuser systems: simulations and experiments

    NASA Astrophysics Data System (ADS)

    Sayah, Abdeljalil; Gijs, Martin A. M.

    2016-11-01

    We characterise computationally and experimentally a three-dimensional (3D) microfluidic passive mixer for various Reynolds numbers ranging from 1 to 100, corresponding to primary flow rates of 10-870 µl min-1. The 3D mixing channel is composed of multiple curved segments: circular arcs situated in the substrate plane and curved nozzle/diffuser elements normal to the substrate plane. Numerical simulation provides a detailed understanding of the mixing mechanism resulting from the geometrical topology of the mixer. These Comsol software-based simulations reveal the development of two secondary flows perpendicular to the primary flow: a swirling flow resulting from tangential injection of the flow into the nozzle holes and Dean vortices present in the circular arcs. These phenomena are particularly important at a Reynolds number larger than 30, where mixing occurs by chaotic advection. Experimentally, the 3D mixer is fabricated in a monolithic glass substrate by powder blasting machining, exploiting eroding powder beams at various angles of impact with respect to the substrate plane. Experimental mixing was characterised using two coloured dyes, showing nearly perfect mixing for a microfluidic footprint of the order of a few mm2, in good agreement with the simulations.

  3. Simulation of a true-triaxial deformation test on anisotropic gneiss using FLAC3D

    NASA Astrophysics Data System (ADS)

    Ye, Shenghua; Sehizadeh, Mehdi; Nasseri, Mohammad; Young, Paul

    2016-04-01

    A series of true-triaxial experiments have been carried out at the University of Toronto's Rock Fracture Dynamics Laboratory. Isotropic pegmatite and gneiss have been used to systematically study the effect of anisotropy on the strength, behaviour and seismic response. Samples were loaded under true-triaxial stress conditions and subjected to complex loading and unloading histories associated with rock deformation around underground openings. The results show expected patterns of weakness from preferentially oriented samples and highlight the importance of unloading history under true-triaxial conditions on the deformation and seismic response of the samples. These tests have been used to validate a synthetic simulation using the Itasca FLAC3D numerical code. The paper describes the FLAC3D simulations of the complex true-triaxial loading and unloading history of the different anisotropic samples. Various parameters were created to describe the physico-mechanical properties of the synthetic rock samples. Foliation planes of preferential orientations with respect to the primary loading direction were added to the synthetic rock samples to reflect the anisotropy of the gneiss. These synthetic rock samples were subjected to the same loading and unloading paths as the real rock samples, and failed in the same mechanism as what was observed from the experiments, and thus it proved the validity of this numerical simulation with FLAC3D.

  4. 3D printing method for freeform fabrication of optical phantoms simulating heterogeneous biological tissue

    NASA Astrophysics Data System (ADS)

    Wang, Minjie; Shen, Shuwei; Yang, Jie; Dong, Erbao; Xu, Ronald

    2014-03-01

    The performance of biomedical optical imaging devices heavily relies on appropriate calibration. However, many of existing calibration phantoms for biomedical optical devices are based on homogenous materials without considering the multi-layer heterogeneous structures observed in biological tissue. Using such a phantom for optical calibration may result in measurement bias. To overcome this problem, we propose a 3D printing method for freeform fabrication of tissue simulating phantoms with multilayer heterogeneous structure. The phantom simulates not only the morphologic characteristics of biological tissue but also absorption and scattering properties. The printing system is based on a 3D motion platform with coordinated control of the DC motors. A special jet nozzle is designed to mix base, scattering, and absorption materials at different ratios. 3D tissue structures are fabricated through layer-by-layer printing with selective deposition of phantom materials of different ingredients. Different mixed ratios of base, scattering and absorption materials have been tested in order to optimize the printing outcome. A spectrometer and a tissue spectrophotometer are used for characterizing phantom absorption and scattering properties. The goal of this project is to fabricate skin tissue simulating phantoms as a traceable standard for the calibration of biomedical optical spectral devices.

  5. Progress on 3-D ICF simulations and Ray-Traced Power Deposition Method

    NASA Astrophysics Data System (ADS)

    Schmitt, Andrew J.; Fyfe, David E.

    2016-10-01

    We have performed 3D simulations of Omega-scale and NIF-scale spherical direct-drive targets with the massively parallel fastrad3d code. Of particular interest is the robustness of the targets to the low mode perturbations impressed on the target by the laser system and how it compares to the influence of the perturbations produced by laser imprinting. As part of this simulation capability, we have upgraded our smoothed 3D raytrace package to run in spherical geometry. This package, which connects rays to form bundles and performs power deposition calculations on the bundles, can decrease laser absorption noise while using fewer rays and less message passing. This model produces both the imprint and the low-mode asymmetry drive that we are interested in here. We show recent simulation results of directly-driven targets using conventional ignition drive, and report on the influences of the two sources - low mode asymmetry and laser imprint - as the pellet conditions (e.g. adiabat) are varied. Work supported by DoE/NNSA.

  6. Meso-Scale Damage Simulation of 3D Braided Composites under Quasi-Static Axial Tension

    NASA Astrophysics Data System (ADS)

    Zhang, Chao; Mao, Chunjian; Zhou, Yexin

    2017-01-01

    The microstructure of 3D braided composites is composed of three phases: braiding yarn, matrix and interface. In this paper, a representative unit-cell (RUC) model including these three phases is established. Coupling with the periodical boundary condition, the damage behavior of 3D braided composites under quasi-static axial tension is simulated by using finite element method based on this RUC model. An anisotropic damage model based on Murakami damage theory is proposed to predict the damage evolution of yarns and matrix; a damage-friction combination interface constitutive model is adopted to predict the interface debonding behavior. A user material subroutine (VUMAT) involving these damage models is developed and implemented in the finite element software ABAQUS/Explicit. The whole process of damage evolution of 3D braided composites under quasi-static axial tension with typical braiding angles is simulated, and the damage mechanisms are revealed in detail in the simulation process. The tensile strength properties of the braided composites are predicted from the calculated stress-strain curves. Numerical results agree with the available experiment data and thus validates the proposed damage analysis model. The effects of certain material parameters on the predicted stress-strain responses are also discussed by numerical parameter study.

  7. Simulation and testing of a multichannel system for 3D sound localization

    NASA Astrophysics Data System (ADS)

    Matthews, Edward Albert

    Three-dimensional (3D) audio involves the ability to localize sound anywhere in a three-dimensional space. 3D audio can be used to provide the listener with the perception of moving sounds and can provide a realistic listening experience for applications such as gaming, video conferencing, movies, and concerts. The purpose of this research is to simulate and test 3D audio by incorporating auditory localization techniques in a multi-channel speaker system. The objective is to develop an algorithm that can place an audio event in a desired location by calculating and controlling the gain factors of each speaker. A MATLAB simulation displays the location of the speakers and perceived sound, which is verified through experimentation. The scenario in which the listener is not equidistant from each of the speakers is also investigated and simulated. This research is envisioned to lead to a better understanding of human localization of sound, and will contribute to a more realistic listening experience.

  8. 3D Numerical Simulation on the Sloshing Waves Excited by the Seismic Shacking

    NASA Astrophysics Data System (ADS)

    Zhang, Lin; Wu, Tso-Ren

    2016-04-01

    In the event of 2015 Nepal earthquake, a video clip broadcasted worldwide showed a violent water spilling in a hotel swimming pool. This sloshing phenomenon indicates a potential water loss in the sensitive facilities, e.g. the spent fuel pools in nuclear power plant, has to be taken into account carefully under the consideration of seismic-induced ground acceleration. In the previous studies, the simulation of sloshing mainly focused on the pressure force on the structure by using a simplified Spring-Mass Method developed in the field of solid mechanics. However, restricted by the assumptions of plane water surface and limited wave height, significant error will be made in evaluating the amount of water loss in the tank. In this paper, the computational fluid dynamical model, Splash3D, was adopted for studying the sloshing problem accurately. Splash3D solved 3D Navier-Stokes Equation directly with Large-Eddy Simulation (LES) turbulent closure. The Volume-of-fluid (VOF) method with piecewise linear interface calculation (PLIC) was used to track the complex breaking water surface. The time series acceleration of a design seismic was loaded to excite the water. With few restrictions from the assumptions, the accuracy of the simulation results were improved dramatically. A series model validations were conducted by compared to a 2D theoretical solution, and a 3D experimental data. Good comparisons can be seen. After the validation, we performed the simulation for considering a sloshing case in a rectangular water tank with a dimension of 12 m long, 8 m wide, 8 m deep, which contained water with 7 m in depth. The seismic movement was imported by considering time-series acceleration in three dimensions, which were about 0.5 g to 1.2 g in the horizontal directions, and 0.3 g to 1 g in the vertical direction. We focused the discussions on the kinematics of the water surface, wave breaking, velocity field, pressure field, water force on the side walls, and, most

  9. Metos3D: the Marine Ecosystem Toolkit for Optimization and Simulation in 3-D - Part 1: Simulation Package v0.3.2

    NASA Astrophysics Data System (ADS)

    Piwonski, Jaroslaw; Slawig, Thomas

    2016-10-01

    We designed and implemented a modular software framework for the offline simulation of steady cycles of 3-D marine ecosystem models based on the transport matrix approach. It is intended for parameter optimization and model assessment experiments. We defined a software interface for the coupling of a general class of water column-based biogeochemical models, with six models being part of the package. The framework offers both spin-up/fixed-point iteration and a Jacobian-free Newton method for the computation of steady states. The simulation package has been tested with all six models. The Newton method converged for four models when using standard settings, and for two more complex models after alteration of a solver parameter or the initial guess. Both methods delivered the same steady states (within a reasonable precision) on convergence for all models employed, with the Newton iteration generally operating 6 times faster. The effects on performance of both the biogeochemical and the Newton solver parameters were investigated for one model. A profiling analysis was performed for all models used in this work, demonstrating that the number of tracers had a dominant impact on overall performance. We also implemented a geometry-adapted load balancing procedure which showed close to optimal scalability up to a high number of parallel processors.

  10. Full 3D opto-electronic simulation tool for nanotextured solar cells (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Michallon, Jérôme; Collin, Stéphane

    2017-04-01

    Increasing efforts on the photovoltaics research have recently been devoted to material savings, leading to the emergence of new designs based on nanotextured and nanowire-based solar cells. The use of small absorber volumes, light-trapping nanostructures and unconventional carrier collection schemes (radial nanowire junctions, point contacts in planar structures,…) increases the impact of surfaces recombination and induces homogeneity in the photogenerated carrier concentrations. The investigation of their impacts on the device performances need to be addressed using full 3D coupled opto-electrical modeling. In this context, we have developed a new tool for full 3D opto-electrical simulation using the most advanced optical and electrical simulation techniques. We will present an overview of its simulation capabilities and the key issues that have been solved to make it fully operational and reliable. We will provide various examples of opto-electronic simulation of (i) nanostructured solar cells with localized contacts and (ii) nanowire solar cells. We will also show how opto-electronic simulation can be used to simulate light- and electron-beam induced current (LBIC/EBIC) experiments, targeting quantitative analysis of the passivation properties of surfaces.

  11. Understanding fiber mixture by simulation in 3D Polarized Light Imaging.

    PubMed

    Dohmen, Melanie; Menzel, Miriam; Wiese, Hendrik; Reckfort, Julia; Hanke, Frederike; Pietrzyk, Uwe; Zilles, Karl; Amunts, Katrin; Axer, Markus

    2015-05-01

    3D Polarized Light Imaging (3D-PLI) is a neuroimaging technique that has opened up new avenues to study the complex architecture of nerve fibers in postmortem brains. The spatial orientations of the fibers are derived from birefringence measurements of unstained histological brain sections that are interpreted by a voxel-based analysis. This, however, implies that a single fiber orientation vector is obtained for each voxel and reflects the net effect of all comprised fibers. The mixture of various fiber orientations within an individual voxel is a priori not accessible by a standard 3D-PLI measurement. In order to better understand the effects of fiber mixture on the measured 3D-PLI signal and to improve the interpretation of real data, we have developed a simulation method referred to as SimPLI. By means of SimPLI, it is possible to reproduce the entire 3D-PLI analysis starting from synthetic fiber models in user-defined arrangements and ending with measurement-like tissue images. For the simulation, each synthetic fiber is considered as an optical retarder, i.e., multiple fibers within one voxel are described by multiple retarder elements. The investigation of different synthetic crossing fiber arrangements generated with SimPLI demonstrated that the derived fiber orientations are strongly influenced by the relative mixture of crossing fibers. In case of perpendicularly crossing fibers, for example, the derived fiber direction corresponds to the predominant fiber direction. The derived fiber inclination turned out to be not only influenced by myelin density but also systematically overestimated due to signal attenuation. Similar observations were made for synthetic models of optic chiasms of a human and a hooded seal which were opposed to experimental 3D-PLI data sets obtained from the chiasms of both species. Our study showed that SimPLI is a powerful method able to test hypotheses on the underlying fiber structure of brain tissue and, therefore, to improve the

  12. High Resolution 3D Simulations of the Impacts of Asteroids into the Venusian Atmosphere

    NASA Astrophysics Data System (ADS)

    Korycansky, D. G.; Zahnle, K. J.; Mac Low, M.-M.

    2000-10-01

    We compare high-resolution 2D and 3D numerical hydrocode simulations of asteroids striking the atmosphere of Venus. Our focus is on aerobraking and its effect on the size of impact craters. We consider impacts both by spheres and by the real asteroid 4769 Castalia, a severely nonspherical body in a Venus-crossing orbit. We compute mass and momentum fluxes as functions of altitude as global measures of the asteroid's progress. We find that, on average, the 2D and 3D simulations are in broad agreement over how quickly an asteroid slows down, but that the scatter about the average is much larger for the 2D models than for the 3D models. The 2D models appear to be strongly susceptible to the ``butterfly effect'', in which tiny changes in initial conditions (e.g., 0.05% change in the impact velocity) produce quite different chaotic evolutions. By contrast the global properties of the 3D models appear more reproducible despite seemingly large differences in initial conditions. We argue that this difference between 2D and 3D models has its root in the greater geometrical constraints present in any 2D model, and in particular in the conservation of enstrophy in 2D that forces energy to pool in large-scale structures. It is the interaction of these artificial large-scale structures that causes slightly different 2D models to diverge so greatly. These constraints do not apply in 3D and large scale structures are not observed to form. A one-parameter modified pancake model reproduces the crater-forming potential of the 3D Castalias quite well. This work was supported by NASA's Exobiology and Planetary Atmospheres Programs. Image rendering was done using the resources of UCSC Vizualizaton Lab. M-MML is partially supported by a CAREER fellowship from the US NSF. This work was partially supported by the National Computational Science Alliance, utilizing the NCSA SGI/CRAY Power Challenge array at the University of Illinois, Urbana-Champaign.

  13. The Impact of 3D Data Quality on Improving GNSS Performance Using City Models Initial Simulations

    NASA Astrophysics Data System (ADS)

    Ellul, C.; Adjrad, M.; Groves, P.

    2016-10-01

    There is an increasing demand for highly accurate positioning information in urban areas, to support applications such as people and vehicle tracking, real-time air quality detection and navigation. However systems such as GPS typically perform poorly in dense urban areas. A number of authors have made use of 3D city models to enhance accuracy, obtaining good results, but to date the influence of the quality of the 3D city model on these results has not been tested. This paper addresses the following question: how does the quality, and in particular the variation in height, level of generalization and completeness and currency of a 3D dataset, impact the results obtained for the preliminary calculations in a process known as Shadow Matching, which takes into account not only where satellite signals are visible on the street but also where they are predicted to be absent. We describe initial simulations to address this issue, examining the variation in elevation angle - i.e. the angle above which the satellite is visible, for three 3D city models in a test area in London, and note that even within one dataset using different available height values could cause a difference in elevation angle of up to 29°. Missing or extra buildings result in an elevation variation of around 85°. Variations such as these can significantly influence the predicted satellite visibility which will then not correspond to that experienced on the ground, reducing the accuracy of the resulting Shadow Matching process.

  14. OptogenSIM: a 3D Monte Carlo simulation platform for light delivery design in optogenetics

    PubMed Central

    Liu, Yuming; Jacques, Steven L.; Azimipour, Mehdi; Rogers, Jeremy D.; Pashaie, Ramin; Eliceiri, Kevin W.

    2015-01-01

    Optimizing light delivery for optogenetics is critical in order to accurately stimulate the neurons of interest while reducing nonspecific effects such as tissue heating or photodamage. Light distribution is typically predicted using the assumption of tissue homogeneity, which oversimplifies light transport in heterogeneous brain. Here, we present an open-source 3D simulation platform, OptogenSIM, which eliminates this assumption. This platform integrates a voxel-based 3D Monte Carlo model, generic optical property models of brain tissues, and a well-defined 3D mouse brain tissue atlas. The application of this platform in brain data models demonstrates that brain heterogeneity has moderate to significant impact depending on application conditions. Estimated light density contours can show the region of any specified power density in the 3D brain space and thus can help optimize the light delivery settings, such as the optical fiber position, fiber diameter, fiber numerical aperture, light wavelength and power. OptogenSIM is freely available and can be easily adapted to incorporate additional brain atlases. PMID:26713200

  15. Sedimentary basin effects in Seattle, Washington: Ground-motion observations and 3D simulations

    USGS Publications Warehouse

    Frankel, Arthur; Stephenson, William; Carver, David

    2009-01-01

    Seismograms of local earthquakes recorded in Seattle exhibit surface waves in the Seattle basin and basin-edge focusing of S waves. Spectral ratios of Swaves and later arrivals at 1 Hz for stiff-soil sites in the Seattle basin show a dependence on the direction to the earthquake, with earthquakes to the south and southwest producing higher average amplification. Earthquakes to the southwest typically produce larger basin surface waves relative to S waves than earthquakes to the north and northwest, probably because of the velocity contrast across the Seattle fault along the southern margin of the Seattle basin. S to P conversions are observed for some events and are likely converted at the bottom of the Seattle basin. We model five earthquakes, including the M 6.8 Nisqually earthquake, using 3D finite-difference simulations accurate up to 1 Hz. The simulations reproduce the observed dependence of amplification on the direction to the earthquake. The simulations generally match the timing and character of basin surface waves observed for many events. The 3D simulation for the Nisqually earth-quake produces focusing of S waves along the southern margin of the Seattle basin near the area in west Seattle that experienced increased chimney damage from the earthquake, similar to the results of the higher-frequency 2D simulation reported by Stephenson et al. (2006). Waveforms from the 3D simulations show reasonable agreement with the data at low frequencies (0.2-0.4 Hz) for the Nisqually earthquake and an M 4.8 deep earthquake west of Seattle.

  16. Implementation of Headtracking and 3D Stereo with Unity and VRPN for Computer Simulations

    NASA Technical Reports Server (NTRS)

    Noyes, Matthew A.

    2013-01-01

    This paper explores low-cost hardware and software methods to provide depth cues traditionally absent in monocular displays. The use of a VRPN server in conjunction with a Microsoft Kinect and/or Nintendo Wiimote to provide head tracking information to a Unity application, and NVIDIA 3D Vision for retinal disparity support, is discussed. Methods are suggested to implement this technology with NASA's EDGE simulation graphics package, along with potential caveats. Finally, future applications of this technology to astronaut crew training, particularly when combined with an omnidirectional treadmill for virtual locomotion and NASA's ARGOS system for reduced gravity simulation, are discussed.

  17. Numerical simulation of the 3D unsteady turbulent flow in a combustion chamber

    NASA Astrophysics Data System (ADS)

    Stuparu, Adrian; Holotescu, Sorin

    2011-06-01

    The influence of turbulence models on the 3D unsteady flow in a combustion chamber with a central bluff body is analyzed. Three different turbulence models are used (realizable k-ɛ, Reynolds Stress Model and Large Eddy Simulation) and a comparison is made on the evolution of the velocity field over time. The numerical simulation of the gas flow in the combustion chamber was performed using FLUENT 6.3 software and the computational geometry, consisting of a structured mesh with 810,000 cells, was built using the pre-processor GAMBIT 2.4. The extent of the recirculation region behind the bluff body was determined for each turbulence model.

  18. Numerical simulation of the 3D unsteady turbulent flow in a combustion chamber

    NASA Astrophysics Data System (ADS)

    Stuparu, Adrian; Holotescu, Sorin

    2011-06-01

    The influence of turbulence models on the 3D unsteady flow in a combustion chamber with a central bluff body is analyzed. Three different turbulence models are used ( realizable k-ɛ, Reynolds Stress Model and Large Eddy Simulation) and a comparison is made on the evolution of the velocity field over time. The numerical simulation of the gas flow in the combustion chamber was performed using FLUENT 6.3 software and the computational geometry, consisting of a structured mesh with 810,000 cells, was built using the pre-processor GAMBIT 2.4. The extent of the recirculation region behind the bluff body was determined for each turbulence model.

  19. Simulation of 3-D shear flows around a nozzle-afterbody at high speeds

    NASA Technical Reports Server (NTRS)

    Baysal, Oktay; Hoffman, Wendy B.

    1991-01-01

    3D, compressible, unsteady, Reynolds-averaged Navier-Stokes equations are presently solved by a finite-volume and alternating-direction-implicit method in order to simulate supersonic and hypersonic turbulent shear flows. The effect of turbulence is incorporated via a modified Baldwin-Lomax eddy viscosity model which reflects the influence of high-speed compressibility, multiple walls, near-wall vortices, and turbulent memory effects, as well as local equilibrium effects. Attention is given to the simulation of the flow around the nozzle-afterbody of a generic, scramjet-propelled hypersonic vehicle; computed pressure distributions are consonant with experimental surface and off-surface flow surveys.

  20. 2-D and 3-D PIC simulations of a SLAC Klystrino

    NASA Astrophysics Data System (ADS)

    Spencer, Thomas; Luginsland, John; Hackett, Kirk; Haworth, Michael; Song, Liqun; Scheitrum, Glenn

    2000-10-01

    The Air Force Research Laboratory is collaborating with the Stanford Linear Accelerator Center in performing 3-D PIC simulations using ARGUS and ICEPIC on a klystrino with the following parameters: voltage of 110 kV, current of 2.4 A, frequency of 94 GHz, peak magnetic field of 4 kG. Results wll be presented and will be compared to 2-D MAGIC simulations, as well as to experimental test data. This work is supported in part by the Air Force Office of Scientific Research.

  1. 3D MHD simulations of planet migration in turbulent stratified disks

    NASA Astrophysics Data System (ADS)

    Uribe, Ana; Klahr, Hubert; Flock, Mario; Henning, Thomas

    2011-11-01

    We performed 3D MHD numerical simulations of planet migration in stratified disks using the Godunov code PLUTO (Mignone et al. 2007). The disk is invaded by turbulence generated by the magnetorotational instability (MRI). We study the migration for planets with different mass to primary mass ratio. The migration of the low-mass planet (q=Mp/Ms=10-5) is dominated by random fluctuations in the torque and there is no defined direction of migration on timescales of 100 orbits. The intermediate-mass planet (q=Mp/Ms=10-4) can experience systematic outwards migration that was sustained for the times we were able to simulate.

  2. Improving light propagation Monte Carlo simulations with accurate 3D modeling of skin tissue

    SciTech Connect

    Paquit, Vincent C; Price, Jeffery R; Meriaudeau, Fabrice; Tobin Jr, Kenneth William

    2008-01-01

    In this paper, we present a 3D light propagation model to simulate multispectral reflectance images of large skin surface areas. In particular, we aim to simulate more accurately the effects of various physiological properties of the skin in the case of subcutaneous vein imaging compared to existing models. Our method combines a Monte Carlo light propagation model, a realistic three-dimensional model of the skin using parametric surfaces and a vision system for data acquisition. We describe our model in detail, present results from the Monte Carlo modeling and compare our results with those obtained with a well established Monte Carlo model and with real skin reflectance images.

  3. Simulation of the impact of 3-D porosity distribution in metallic U-10Zr fuels

    NASA Astrophysics Data System (ADS)

    Yun, Di; Yacout, Abdellatif M.; Stan, Marius; Bauer, Theodore H.; Wright, Arthur E.

    2014-05-01

    Evolution of porosity generated in metallic U-Zr fuel irradiated in fast spectrum reactors leads to changes in fuel properties and impacts important phenomena such as heat transport and constituent redistribution. The porosity is generated as a result of the accumulation of fission gases and is affected by the possible bond sodium infiltration into the fuel. Typically, the impact of porosity development on properties, such as thermal conductivity, is accounted for through empirical correlations that are dependent on porosity and infiltrated sodium fractions. Currently available simulation tools make it possible to take into account fuel 3-D porosity distributions, potentially eliminating the need for such correlations. This development allows for a more realistic representation of the porosity evolution in metallic fuel and creates a framework for truly mechanistic fuel development models. In this work, COMSOL multi-physics simulation platform is used to model 3-D porosity distributions and simulate heat transport in metallic U-10Zr fuel. Available experimental data regarding microstructural evolution of fuel that was irradiated in EBR-II and associated phase stability information are used to guide the simulation. The impact of changes in porosity characteristics on material properties is estimated and the results are compared with calculated temperature distributions. The simulations demonstrate the developed capability and importance of accounting for detailed porosity distribution features for accurate fuel performance evaluation.

  4. Performance of dental students versus prosthodontics residents on a 3D immersive haptic simulator.

    PubMed

    Eve, Elizabeth J; Koo, Samuel; Alshihri, Abdulmonem A; Cormier, Jeremy; Kozhenikov, Maria; Donoff, R Bruce; Karimbux, Nadeem Y

    2014-04-01

    This study evaluated the performance of dental students versus prosthodontics residents on a simulated caries removal exercise using a newly designed, 3D immersive haptic simulator. The intent of this study was to provide an initial assessment of the simulator's construct validity, which in the context of this experiment was defined as its ability to detect a statistically significant performance difference between novice dental students (n=12) and experienced prosthodontics residents (n=14). Both groups received equivalent calibration training on the simulator and repeated the same caries removal exercise three times. Novice and experienced subjects' average performance differed significantly on the caries removal exercise with respect to the percentage of carious lesion removed and volume of surrounding sound tooth structure removed (p<0.05). Experienced subjects removed a greater portion of the carious lesion, but also a greater volume of the surrounding tooth structure. Efficiency, defined as percentage of carious lesion removed over drilling time, improved significantly over the course of the experiment for both novice and experienced subjects (p<0.001). Within the limitations of this study, experienced subjects removed a greater portion of carious lesion on a 3D immersive haptic simulator. These results are a first step in establishing the validity of this device.

  5. 3D printing of microtube in solid phantom to simulate tissue oxygenation and perfusion (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Lv, Xiang; Xue, Yue; Wang, Haili; Shen, Shu Wei; Zhou, Ximing; Liu, Guangli; Dong, Erbao; Xu, Ronald X.

    2017-03-01

    Tissue-simulating phantoms with interior vascular network may facilitate traceable calibration and quantitative validation of many medical optical devices. However, a solid phantom that reliably simulates tissue oxygenation and blood perfusion is still not available. This paper presents a new method to fabricate hollow microtubes for blood vessel simulation in solid phantoms. The fabrication process combines ultraviolet (UV) rapid prototyping technique with fluid mechanics of a coaxial jet flow. Polydimethylsiloxane (PDMS) and a UV-curable polymer are mixed at the designated ratio and extruded through a coaxial needle device to produce a coaxial jet flow. The extruded jet flow is quickly photo-polymerized by ultraviolet (UV) light to form vessel-simulating solid structures at different sizes ranging from 700 μm to 1000 μm. Microtube structures with adequate mechanical properties can be fabricated by adjusting material compositions and illumination intensity. Curved, straight and stretched microtubes can be formed by adjusting the extrusion speed of the materials and the speed of the 3D printing platform. To simulate vascular structures in biologic tissue, we embed vessel-simulating microtubes in a gel wax phantom of 10 cm x10 cm x 5 cm at the depth from 1 to 2 mm. Bloods at different oxygenation and hemoglobin concentration levels are circulated through the microtubes at different flow rates in order to simulate different oxygenation and perfusion conditions. The simulated physiologic parameters are detected by a tissue oximeter and a laser speckle blood flow meter respectively and compared with the actual values. Our experiments demonstrate that the proposed 3D printing process is able to produce solid phantoms with simulated vascular networks for potential applications in medical device calibration and drug delivery studies.

  6. Simulations of Aperture Synthesis Imaging Radar for the EISCAT_3D Project

    NASA Astrophysics Data System (ADS)

    La Hoz, C.; Belyey, V.

    2012-12-01

    EISCAT_3D is a project to build the next generation of incoherent scatter radars endowed with multiple 3-dimensional capabilities that will replace the current EISCAT radars in Northern Scandinavia. Aperture Synthesis Imaging Radar (ASIR) is one of the technologies adopted by the EISCAT_3D project to endow it with imaging capabilities in 3-dimensions that includes sub-beam resolution. Complemented by pulse compression, it will provide 3-dimensional images of certain types of incoherent scatter radar targets resolved to about 100 metres at 100 km range, depending on the signal-to-noise ratio. This ability will open new research opportunities to map small structures associated with non-homogeneous, unstable processes such as aurora, summer and winter polar radar echoes (PMSE and PMWE), Natural Enhanced Ion Acoustic Lines (NEIALs), structures excited by HF ionospheric heating, meteors, space debris, and others. To demonstrate the feasibility of the antenna configurations and the imaging inversion algorithms a simulation of synthetic incoherent scattering data has been performed. The simulation algorithm incorporates the ability to control the background plasma parameters with non-homogeneous, non-stationary components over an extended 3-dimensional space. Control over the positions of a number of separated receiving antennas, their signal-to-noise-ratios and arriving phases allows realistic simulation of a multi-baseline interferometric imaging radar system. The resulting simulated data is fed into various inversion algorithms. This simulation package is a powerful tool to evaluate various antenna configurations and inversion algorithms. Results applied to realistic design alternatives of EISCAT_3D will be described.

  7. Multi-Cell Simulations of Development and Disease Using the CompuCell3D Simulation Environment

    PubMed Central

    Swat, Maciej H.; Hester, Susan D.; Heiland, Randy W.; Zaitlen, Benjamin L.; Glazier, James A.

    2009-01-01

    Mathematical modeling and computer simulation have become crucial to biological fields from genomics to ecology. However, multi-cell, tissue-level simulations of development and disease have lagged behind other areas because they are mathematically more complex and lack easy-to-use software tools that allow building and running in-silico experiments without requiring in-depth knowledge of programming. This tutorial introduces Glazier-Graner-Hogeweg (GGH) multi-cell simulations and CompuCell3D, a simulation framework that allows users to build, test and run GGH simulations. PMID:19399437

  8. 3D Monte Carlo simulation of light propagation for laser acupuncture and optimization of illumination parameters

    NASA Astrophysics Data System (ADS)

    Zhong, Fulin; Li, Ting; Pan, Boan; Wang, Pengbo

    2017-02-01

    Laser acupuncture is an effective photochemical and nonthermal stimulation of traditional acupuncture points with lowintensity laser irradiation, which is advantageous in painless, sterile, and safe compared to traditional acupuncture. Laser diode (LD) provides single wavelength and relatively-higher power light for phototherapy. The quantitative effect of illumination parameters of LD in use of laser acupuncture is crucial for practical operation of laser acupuncture. However, this issue is not fully demonstrated, especially since experimental methodologies with animals or human are pretty hard to address to this issue. For example, in order to protect viability of cells and tissue, and get better therapeutic effect, it's necessary to control the output power varied at 5mW 10mW range, while the optimized power is still not clear. This study aimed to quantitatively optimize the laser output power, wavelength, and irradiation direction with highly realistic modeling of light transport in acupunctured tissue. A Monte Carlo Simulation software for 3D vowelized media and the highest-precision human anatomical model Visible Chinese Human (VCH) were employed. Our 3D simulation results showed that longer wavelength/higher illumination power, larger absorption in laser acupuncture; the vertical direction emission of the acupuncture laser results in higher amount of light absorption in both the acupunctured voxel of tissue and muscle layer. Our 3D light distribution of laser acupuncture within VCH tissue model is potential to be used in optimization and real time guidance in clinical manipulation of laser acupuncture.

  9. Full Core 3-D Simulation of a Partial MOX LWR Core

    SciTech Connect

    S. Bays; W. Skerjanc; M. Pope

    2009-05-01

    A comparative analysis and comparison of results obtained between 2-D lattice calculations and 3-D full core nodal calculations, in the frame of MOX fuel design, was conducted. This study revealed a set of advantages and disadvantages, with respect to each method, which can be used to guide the level of accuracy desired for future fuel and fuel cycle calculations. For the purpose of isotopic generation for fuel cycle analyses, the approach of using a 2-D lattice code (i.e., fuel assembly in infinite lattice) gave reasonable predictions of uranium and plutonium isotope concentrations at the predicted 3-D core simulation batch average discharge burnup. However, it was found that the 2-D lattice calculation can under-predict the power of pins located along a shared edge between MOX and UO2 by as much as 20%. In this analysis, this error did not occur in the peak pin. However, this was a coincidence and does not rule out the possibility that the peak pin could occur in a lattice position with high calculation uncertainty in future un-optimized studies. Another important consideration in realistic fuel design is the prediction of the peak axial burnup and neutron fluence. The use of 3-D core simulation gave peak burnup conditions, at the pellet level, to be approximately 1.4 times greater than what can be predicted using back-of-the-envelope assumptions of average specific power and irradiation time.

  10. [Design of a 3D afterloading brachytherapy simulation system based on CT images].

    PubMed

    Yu, Hui; Xu, Hai-Rong; Zhang, Shu-Xu; Shi, Yu-Sheng; Qian, Jian-Yang

    2008-03-01

    To design a new afterloading brachytherapy simulation system based on CT images. This paper mainly focuses on the anthropomorphic pelvic phantom spiled by three pipelines and the nasopharyngeal carcinoma spiled by two pipelines. Microsoft Visual C++ was used to parse CT images for some information, then to reconstruct pipelines in the body of phantom or the patient and to give the three-dimensional coordinate of dwelling points. The dose distribution displayed on CT images was processed by the dose distribution calculation methods near single afterloading source and the dose optimization methods. VTK technology was used in the 3D display in the system. According to the reference points applied by doctors, the system can calculate reversely the dwelling time of dwelling points in pipelines and get satisfying dose distribution on CT images. Besides, it can reflect the 3D relationship between the dose volume and the normal tissues. This system overcomes some deficiencies of 2D afterloading brachytherapy simulation system based on X-ray films which are used widely in China. It supplies 3D display of dose distribution for clinical doctors. At present, the system is being tested in clinics.

  11. Phenomenological modelling and simulation of cell clusters in 3D cultures.

    PubMed

    González-Valverde, I; Semino, C; García-Aznar, J M

    2016-10-01

    Cell clustering and aggregation are fundamental processes in the development of several tissues and the progression of many diseases. The formation of these aggregates also has a direct impact on the oxygen concentration in their surroundings due to cellular respiration and poor oxygen diffusion through clusters. In this work, we propose a mathematical model that is capable of simulating cell cluster formation in 3D cultures through combining a particle-based and a finite element approach to recreate complex experimental conditions. Cells are modelled considering cell proliferation, cell death and cell-cell mechanical interactions. Additionally, the oxygen concentration profile is calculated through finite element analysis using a reaction-diffusion model that considers cell oxygen consumption and diffusion through the extracellular matrix and the cell clusters. In our model, the local oxygen concentration in the medium determines both cell proliferation and cell death. Numerical predictions are also compared with experimental data from the literature. The simulation results indicate that our model can predict cell clustering, cluster growth and oxygen distribution in 3D cultures. We conclude that the initial cell distribution, cell death and cell proliferation dynamics determine the size and density of clusters. Moreover, these phenomena are directly affected by the oxygen transport in the 3D culture. Copyright © 2016 Elsevier Ltd. All rights reserved.

  12. Usefulness of three-dimensional(3D) simulation software in hepatectomy for pediatric hepatoblastoma.

    PubMed

    Zhang, Gang; Zhou, Xian-Jun; Zhu, Cheng-Zhan; Dong, Qian; Su, Lin

    2016-09-01

    Hepatoblastoma (HB) is the most common malignant liver tumor in childhood. Complete HB surgical resection which is technically demanding is the cornerstone of effective therapy with a good prognosis. The aim of our study is to evaluate the usefulness of 3D simulation software in assisting hepatectomy in pediatric patients with HB. 21 children with HB who underwent hepatectomy were enrolled in this study. All patients underwent computer tomography (CT) imaging preoperatively. CT images from 11 cases (from September 2013 to August 2015) were reconstructed with Hisense CAS, and performed hetpatectomy. While 10 cases (from September 2011 to August 2013) without 3D simulation were token as the control group. The clinical outcome were analyzed and compared between the 2 groups. All the HB were successfully removed for all patients and there was no positive margins in the surgical specimens, no complications, and no recurrences. For the reconstructing group, 3D simulation software successfully reconstructed the 3D images of liver and were used as a navigator in the operation room during hepatectomy. Anatomic hepatectomy were successfully completed for all patients after operation planning using the software. There was no obvious discrepancy between the virtual and the actual hepatectomy. The mean operation time was shorter (142.18 ± 21.87 min VS. the control group, 173.5 ± 54.88 min, p = 0.047) and intraoperative bleeding was less (28.73 ± 14.17 ml VS. 42.8 ± 41.12 ml, p = 0.011) in the reconstructing group. Moreover, postoperative hospital stay tended to be shorter in the reconstructing group (11.18 ± 2.78d VS. the control group 13 ± 3.46d, P = 0.257). 3D simulation software facilitates the investigation of the complex liver structure, contributes to the optimal operation planning, and enables an individualized anatomic hepatectomy for each pediatric patient with HB. Copyright © 2016 Elsevier Ltd. All rights reserved.

  13. Lightning strike simulation using coaxial line technique and 3D linear injection current analysis

    NASA Astrophysics Data System (ADS)

    Flourens, F.; Gauthier, D.; Serafin, D.

    1989-09-01

    The GORFFD code for determining aircraft responses to either a lightning event or to simulated current injection is based on the finite-difference solution of Maxwell's equation, and allows the simulation of complex, 3D metallic and dielectric composite structures. A transfer method is used to analyze the EM environment associated with in-flight measurements. Attention is given to a linear-analysis numerical model in which the lightning channel is simulated as a thin wire that is driven by a current source. Surface E-fields and current mappings are produced for the Transall transport and Mirage fighter aircraft. An experimental method has been devised for verification of these lightning-strike simulations.

  14. Toward high-speed 3D nonlinear soft tissue deformation simulations using Abaqus software.

    PubMed

    Idkaidek, Ashraf; Jasiuk, Iwona

    2015-12-01

    We aim to achieve a fast and accurate three-dimensional (3D) simulation of a porcine liver deformation under a surgical tool pressure using the commercial finite element software Abaqus. The liver geometry is obtained using magnetic resonance imaging, and a nonlinear constitutive law is employed to capture large deformations of the tissue. Effects of implicit versus explicit analysis schemes, element type, and mesh density on computation time are studied. We find that Abaqus explicit and implicit solvers are capable of simulating nonlinear soft tissue deformations accurately using first-order tetrahedral elements in a relatively short time by optimizing the element size. This study provides new insights and guidance on accurate and relatively fast nonlinear soft tissue simulations. Such simulations can provide force feedback during robotic surgery and allow visualization of tissue deformations for surgery planning and training of surgical residents.

  15. Numerical simulation of pulsation processes in hydraulic turbine based on 3D model of cavitating flow

    NASA Astrophysics Data System (ADS)

    Panov, L. V.; Chirkov, D. V.; Cherny, S. G.; Pylev, I. M.

    2014-01-01

    A new approach was proposed for simulation of unsteady cavitating flow in the flow passage of a hydraulic power plant. 1D hydro-acoustics equations are solved in the penstock domain. 3D equations of turbulent flow of isothermal compressible liquid-vapor mixture are solved in the turbine domain. Cavitation is described by a transfer equation for liquid phase with a source term which is responsible for evaporation and condensation. The developed method was applied for simulation of pulsations in pressure, discharge, and total energy propagating along the flow conduit of the hydraulic power plant. Simulation results are in qualitative and quantitative agreement with experiment. The influence of key physical and numerical parameters like discharge, cavitation number, penstock length, time step, and vapor density on simulation results was studied.

  16. Anomalous Surface Deformation of Sapphire Clarified by 3D-FEM Simulation of the Nanoindentation

    NASA Astrophysics Data System (ADS)

    Nowak, Roman; Manninen, Timo; Li, Chunliang; Heiskanen, Kari; Hannula, Simo-Pekka; Lindroos, Veikko; Soga, Tetsuo; Yoshida, Fusahito

    This work clarifies the origin of anomalous surface deformation reflected by peculiar surface patterns around indentation impressions on various crystallographic planes of sapphire. The three-dimensional finite element simulation (3D-FEM) of nanoindentation in Al2O3 crystal allowed the authors to localize the regions in which various kinds of twinning and slip are most prone to be activated. The work provides a novel approach to the “hardness anisotropy”, which was modeled so far using a modified uniaxial-stress approximation of this essentially 3D, non-isotropic contact problem. The calculated results enabled the authors to unravel the asymmetric surface deformation detected on prismatic planes by the high-resolution microscopy, which cannot be explained using simple crystallographic considerations.

  17. Application of FUN3D Solver for Aeroacoustics Simulation of a Nose Landing Gear Configuration

    NASA Technical Reports Server (NTRS)

    Vatsa, Veer N.; Lockard, David P.; Khorrami, Mehdi R.

    2011-01-01

    Numerical simulations have been performed for a nose landing gear configuration corresponding to the experimental tests conducted in the Basic Aerodynamic Research Tunnel at NASA Langley Research Center. A widely used unstructured grid code, FUN3D, is examined for solving the unsteady flow field associated with this configuration. A series of successively finer unstructured grids has been generated to assess the effect of grid refinement. Solutions have been obtained on purely tetrahedral grids as well as mixed element grids using hybrid RANS/LES turbulence models. The agreement of FUN3D solutions with experimental data on the same size mesh is better on mixed element grids compared to pure tetrahedral grids, and in general improves with grid refinement.

  18. Comparison between 2D and 3D Numerical Modelling of a hot forging simulative test

    SciTech Connect

    Croin, M.; Ghiotti, A.; Bruschi, S.

    2007-04-07

    The paper presents the comparative analysis between 2D and 3D modelling of a simulative experiment, performed in laboratory environment, in which operating conditions approximate hot forging of a turbine aerofoil section. The plane strain deformation was chosen as an ideal case to analyze the process because of the thickness variations in the final section and the consequent distributions of contact pressure and sliding velocity at the interface that are closed to the conditions of the real industrial process. In order to compare the performances of 2D and 3D approaches, two different analyses were performed and compared with the experiments in terms of loads and temperatures peaks at the interface between the dies and the workpiece.

  19. Reconstruction of quadratic curves in 3D using two or more perspective views: simulation studies

    NASA Astrophysics Data System (ADS)

    Kumar, Sanjeev; Sukavanam, N.; Balasubramanian, R.

    2006-01-01

    The shapes of many natural and man-made objects have planar and curvilinear surfaces. The images of such curves usually do not have sufficient distinctive features to apply conventional feature-based reconstruction algorithms. In this paper, we describe a method of reconstruction of a quadratic curve in 3-D space as an intersection of two cones containing the respective projected curve images. The correspondence between this pair of projections of the curve is assumed to be established in this work. Using least-square curve fitting, the parameters of a curve in 2-D space are found. From this we are reconstructing the 3-D quadratic curve. Relevant mathematical formulations and analytical solutions for obtaining the equation of reconstructed curve are given. The result of the described reconstruction methodology are studied by simulation studies. This reconstruction methodology is applicable to LBW decision in cricket, path of the missile, Robotic Vision, path lanning etc.

  20. Novel 3D/VR interactive environment for MD simulations, visualization and analysis.

    PubMed

    Doblack, Benjamin N; Allis, Tim; Dávila, Lilian P

    2014-12-18

    The increasing development of computing (hardware and software) in the last decades has impacted scientific research in many fields including materials science, biology, chemistry and physics among many others. A new computational system for the accurate and fast simulation and 3D/VR visualization of nanostructures is presented here, using the open-source molecular dynamics (MD) computer program LAMMPS. This alternative computational method uses modern graphics processors, NVIDIA CUDA technology and specialized scientific codes to overcome processing speed barriers common to traditional computing methods. In conjunction with a virtual reality system used to model materials, this enhancement allows the addition of accelerated MD simulation capability. The motivation is to provide a novel research environment which simultaneously allows visualization, simulation, modeling and analysis. The research goal is to investigate the structure and properties of inorganic nanostructures (e.g., silica glass nanosprings) under different conditions using this innovative computational system. The work presented outlines a description of the 3D/VR Visualization System and basic components, an overview of important considerations such as the physical environment, details on the setup and use of the novel system, a general procedure for the accelerated MD enhancement, technical information, and relevant remarks. The impact of this work is the creation of a unique computational system combining nanoscale materials simulation, visualization and interactivity in a virtual environment, which is both a research and teaching instrument at UC Merced.

  1. Novel 3D/VR Interactive Environment for MD Simulations, Visualization and Analysis

    PubMed Central

    Doblack, Benjamin N.; Allis, Tim; Dávila, Lilian P.

    2014-01-01

    The increasing development of computing (hardware and software) in the last decades has impacted scientific research in many fields including materials science, biology, chemistry and physics among many others. A new computational system for the accurate and fast simulation and 3D/VR visualization of nanostructures is presented here, using the open-source molecular dynamics (MD) computer program LAMMPS. This alternative computational method uses modern graphics processors, NVIDIA CUDA technology and specialized scientific codes to overcome processing speed barriers common to traditional computing methods. In conjunction with a virtual reality system used to model materials, this enhancement allows the addition of accelerated MD simulation capability. The motivation is to provide a novel research environment which simultaneously allows visualization, simulation, modeling and analysis. The research goal is to investigate the structure and properties of inorganic nanostructures (e.g., silica glass nanosprings) under different conditions using this innovative computational system. The work presented outlines a description of the 3D/VR Visualization System and basic components, an overview of important considerations such as the physical environment, details on the setup and use of the novel system, a general procedure for the accelerated MD enhancement, technical information, and relevant remarks. The impact of this work is the creation of a unique computational system combining nanoscale materials simulation, visualization and interactivity in a virtual environment, which is both a research and teaching instrument at UC Merced. PMID:25549300

  2. 3D source localization derived from subdural strip and grid electrodes: a simulation study.

    PubMed

    Dümpelmann, Matthias; Fell, Jürgen; Wellmer, Jörg; Urbach, Horst; Elger, Christian E

    2009-06-01

    Little experience exists in the application of source reconstruction methods to recordings from subdural strip and grid electrodes. This study addressed the question, whether reliable and accurate 3D source localization is possible from the Electrocorticogram (ECoG). The accuracy of source reconstruction was investigated by simulations and a case study. Simulated sources were used to compute potentials at the electrode positions derived from the MRI of a patient with subdural electrodes. Used procedures were the linear estimation (minimum norm) algorithm and the MUSIC (MUltiple SIgnal Classification) scan. Maxima of linear estimation were attracted to adjacent electrodes. Reliable localization with a localization error 15 mm was only achieved for about 35% of the original source positions. Maxima of the MUSIC metric were identical to original positions for simulations without noise. Noise reduced the percentage of reliable solutions down to a 79.0%. Electrode contacts distant to the source had small influence on localization accuracy. The case study supported simulation results. Reliable source reconstruction derived from ECoG can be achieved by the application of the MUSIC algorithm. Linear estimation needs additional compensation mechanisms. MUSIC based 3D localization based on ECoG has the potential improving epilepsy diagnosis and cognitive research.

  3. Magnetospheric Magnetic Reconnection with Southward IMF by a 3D EMPM Simulation

    NASA Technical Reports Server (NTRS)

    Nishikawa, K.-I.; Yan, X. Y.; Cai, D. S.; Lembege, B.

    2004-01-01

    We report our new simulation results on magnetospheric magnetic reconnection with southward IMF using a 3D EMPM model, with greater resolution and more particles using the parallelized 3D HPF TRISTAN code on VPP5000 supercomputer. Main parameters used in the new simulation are: domain size is 215 x 145 x 145, grid size = 0.5 Earth radius, initial particle number is 16 per cell, the IMF is southward. Arrival of southward IMF will cause reconnection in the magnetopause, thus allowing particles to enter into the inner magnetosphere. Sunward and tailward high particle flow are observed by satellites, and these phenomena are also observed in the simulation near the neutral line (X line) of the near-Earth magnetotail. This high particle flow goes along with the reconnected island. The magnetic reconnection process contributes to direct plasma entry between the magnetosheath to the inner magnetosphere and plasma sheet, in which the entry process eats the magnetosheath plasma to plasma sheet temperatures. We investigate magnetic, electric fields, density, and current during this magnetic reconnection with southward IMF. Further investigation with this simulation will provide insight into unsolved problems, such as the triggering of storms and substorms, and the storm-substorm relationship. New results will be presented at the meeting.

  4. Aeroacoustic Simulations of a Nose Landing Gear with FUN3D: A Grid Refinement Study

    NASA Technical Reports Server (NTRS)

    Vatsa, Veer N.; Khorrami, Mehdi R.; Lockard, David P.

    2017-01-01

    A systematic grid refinement study is presented for numerical simulations of a partially-dressed, cavity-closed (PDCC) nose landing gear configuration that was tested in the University of Florida's open-jet acoustic facility known as the UFAFF. The unstructured-grid flow solver FUN3D is used to compute the unsteady flow field for this configuration. Mixed-element grids generated using the Pointwise (Registered Trademark) grid generation software are used for numerical simulations. Particular care is taken to ensure quality cells and proper resolution in critical areas of interest in an effort to minimize errors introduced by numerical artifacts. A set of grids was generated in this manner to create a family of uniformly refined grids. The finest grid was then modified to coarsen the wall-normal spacing to create a grid suitable for the wall-function implementation in FUN3D code. A hybrid Reynolds-averaged Navier-Stokes/large eddy simulation (RANS/LES) turbulence modeling approach is used for these simulations. Time-averaged and instantaneous solutions obtained on these grids are compared with the measured data. These CFD solutions are used as input to a FfowcsWilliams-Hawkings (FW-H) noise propagation code to compute the farfield noise levels. The agreement of the computed results with the experimental data improves as the grid is refined.

  5. Simulation of RBS spectra with known 3D sample surface roughness

    NASA Astrophysics Data System (ADS)

    Malinský, Petr; Siegel, Jakub; Hnatowicz, Vladimir; Macková, Anna; Švorčík, Václav

    2017-09-01

    The Rutherford Backscattering Spectrometry (RBS) is a technique for elemental depth profiling with a nanometer depth resolution. Possible surface roughness of analysed samples can deteriorate the RBS spectra and makes their interpretation more difficult and ambiguous. This work describes the simulation of RBS spectra which takes into account real 3D morphology of the sample surface obtained by AFM method. The RBS spectrum is calculated as a sum of the many particular spectra obtained for randomly chosen particle trajectories over sample 3D landscape. The spectra, simulated for different ion beam incidence angles, are compared to the experimental ones measured with 2.0 MeV 4He+ ions. The main aim of this work is to obtain more definite information on how a particular surface morphology and measuring geometry affects the RBS spectra and derived elemental depth profiles. A reasonable agreement between the measured and simulated spectra was found and the results indicate that the AFM data on the sample surface can be used for the simulation of RBS spectra.

  6. Simulating 3-D lung dynamics using a programmable graphics processing unit.

    PubMed

    Santhanam, Anand P; Hamza-Lup, Felix G; Rolland, Jannick P

    2007-09-01

    Medical simulations of lung dynamics promise to be effective tools for teaching and training clinical and surgical procedures related to lungs. Their effectiveness may be greatly enhanced when visualized in an augmented reality (AR) environment. However, the computational requirements of AR environments limit the availability of the central processing unit (CPU) for the lung dynamics simulation for different breathing conditions. In this paper, we present a method for computing lung deformations in real time by taking advantage of the programmable graphics processing unit (GPU). This will save the CPU time for other AR-associated tasks such as tracking, communication, and interaction management. An approach for the simulations of the three-dimensional (3-D) lung dynamics using Green's formulation in the case of upright position is taken into consideration. We extend this approach to other orientations as well as the subsequent changes in breathing. Specifically, the proposed extension presents a computational optimization and its implementation in a GPU. Results show that the computational requirements for simulating the deformation of a 3-D lung model are significantly reduced for point-based rendering.

  7. 3D simulations of young core-collapse supernova remnants undergoing efficient particle acceleration

    NASA Astrophysics Data System (ADS)

    Ferrand, Gilles; Safi-Harb, Samar

    2016-06-01

    Within our Galaxy, supernova remnants are believed to be the major sources of cosmic rays up to the 'knee'. However important questions remain regarding the share of the hadronic and leptonic components, and the fraction of the supernova energy channelled into these components. We address such question by the means of numerical simulations that combine a hydrodynamic treatment of the shock wave with a kinetic treatment of particle acceleration. Performing 3D simulations allows us to produce synthetic projected maps and spectra of the thermal and non-thermal emission, that can be compared with multi-wavelength observations (in radio, X-rays, and γ-rays). Supernovae come in different types, and although their energy budget is of the same order, their remnants have different properties, and so may contribute in different ways to the pool of Galactic cosmic-rays. Our first simulations were focused on thermonuclear supernovae, like Tycho's SNR, that usually occur in a mostly undisturbed medium. Here we present our 3D simulations of core-collapse supernovae, like the Cas A SNR, that occur in a more complex medium bearing the imprint of the wind of the progenitor star.

  8. Multiple-mode Lamb wave scattering simulations using 3D elastodynamic finite integration technique.

    PubMed

    Leckey, Cara A C; Rogge, Matthew D; Miller, Corey A; Hinders, Mark K

    2012-02-01

    We have implemented three-dimensional (3D) elastodynamic finite integration technique (EFIT) simulations to model Lamb wave scattering for two flaw-types in an aircraft-grade aluminum plate, a rounded rectangle flat-bottom hole and a disbond of the same shape. The plate thickness and flaws explored in this work include frequency-thickness regions where several Lamb wave modes exist and sometimes overlap in phase and/or group velocity. For the case of the flat-bottom hole the depth was incrementally increased to explore progressive changes in multiple-mode Lamb wave scattering due to the damage. The flat-bottom hole simulation results have been compared to experimental data and are shown to provide key insight for this well-defined experimental case by explaining unexpected results in experimental waveforms. For the rounded rectangle disbond flaw, which would be difficult to implement experimentally, we found that Lamb wave behavior differed significantly from the flat-bottom hole flaw. Most of the literature in this field is restricted to low frequency-thickness regions due to difficulties in interpreting data when multiple modes exist. We found that benchmarked 3D EFIT simulations can yield an understanding of scattering behavior for these higher frequency-thickness regions and in cases that would be difficult to set up experimentally. Additionally, our results show that 2D simulations would not have been sufficient for modeling the complicated scattering that occurred. Published by Elsevier B.V.

  9. Fast thermal simulations and temperature optimization for hyperthermia treatment planning, including realistic 3D vessel networks.

    PubMed

    Kok, H P; van den Berg, C A T; Bel, A; Crezee, J

    2013-10-01

    Accurate thermal simulations in hyperthermia treatment planning require discrete modeling of large blood vessels. The very long computation time of the finite difference based DIscrete VAsculature model (DIVA) developed for this purpose is impractical for clinical applications. In this work, a fast steady-state thermal solver was developed for simulations with realistic 3D vessel networks. Additionally, an efficient temperature-based optimization method including the thermal effect of discrete vasculature was developed. The steady-state energy balance for vasculature and tissue was described by a linear system, which was solved with an iterative method on the graphical processing unit. Temperature calculations during optimization were performed by superposition of several precomputed temperature distributions, calculated with the developed thermal solver. The thermal solver and optimization were applied to a human anatomy, with the prostate being the target region, heated with the eight waveguide 70 MHz AMC-8 system. Realistic 3D pelvic vasculature was obtained from angiography. Both the arterial and venous vessel networks consisted of 174 segments and 93 endpoints with a diameter of 1.2 mm. Calculation of the steady-state temperature distribution lasted about 3.3 h with the original DIVA model, while the newly developed method took only ≈ 1-1.5 min. Temperature-based optimization with and without taking the vasculature into account showed differences in optimized waveguide power of more than a factor 2 and optimized tumor T90 differed up to ≈ 0.5°C. This shows the necessity to take discrete vasculature into account during optimization. A very fast method was developed for thermal simulations with realistic 3D vessel networks. The short simulation time allows online calculations and makes temperature optimization with realistic vasculature feasible, which is an important step forward in hyperthermia treatment planning.

  10. A 3D TCAD simulation of a thermoelectric module configured for thermoelectric power generation, cooling and heating

    NASA Astrophysics Data System (ADS)

    Gould, C. A.; Shammas, N. Y. A.; Grainger, S.; Taylor, I.; Simpson, K.

    2012-06-01

    This paper documents the 3D modeling and simulation of a three couple thermoelectric module using the Synopsys Technology Computer Aided Design (TCAD) semiconductor simulation software. Simulation results are presented for thermoelectric power generation, cooling and heating, and successfully demonstrate the basic thermoelectric principles. The 3D TCAD simulation model of a three couple thermoelectric module can be used in the future to evaluate different thermoelectric materials, device structures, and improve the efficiency and performance of thermoelectric modules.

  11. Nanoelectronic Modeling (NEMO): Moving from commercial grade 1-D simulation to prototype 3-D simulation

    NASA Astrophysics Data System (ADS)

    Klimeck, Gerhard

    2001-03-01

    The quantum mechanical functionality of commercially pursued heterostructure devices such as resonant tunneling diodes (RTDs), quantum well infrared photodetectors, and quantum well lasers are enabled by material variations on an atomic scale. The creation of these heterostructure devices is realized in a vast design space of material compositions, layer thicknesses and doping profiles. The full experimental exploration of this design space is unfeasible and a reliable design tool is needed. The Nanoelectronic Modeling tool (NEMO) is one of the first commercial grade attempts for such a modeling tool. NEMO was developed as a general-purpose quantum mechanics-based 1-D device design and analysis tool from 1993-97 by the Central Research Laboratory of Texas Instruments (later Raytheon Systems). NEMO enables(R. Lake, G. Klimeck, R. C. Bowen, and D. Jovanovic, J. Appl. Phys. 81), 7845 (1997). the fundamentally sound inclusion of the required(G. Klimeck et al.), in the 1997 55th Annual Device Research Conference Digest, (IEEE, NJ, 1997), p. 92^,(R. C. Bowen et al.), J. Appl. Phys 81, 3207 (1997). physics: bandstructure, scattering, and charge self-consistency based on the non-equilibrium Green function approach. A new class of devices which require full 3-D quantum mechanics based models is starting to emerge: quantum dots, or in general semiconductor based deca-nano devices. We are currently building a 3-D modeling tool based on NEMO to include the important physics to understand electronic stated in such superscaled structures. This presentation will overview various facets of the NEMO 1-D tool such electron transport physics in RTDs, numerical technology, software engineering and graphical user interface. The lessons learned from that work are now entering the 3D>NEMO 3-D development and first results using the NEMO 3-D prototype will be shown. More information about

  12. 3D numerical simulations of negative hydrogen ion extraction using realistic plasma parameters, geometry of the extraction aperture and full 3D magnetic field map

    NASA Astrophysics Data System (ADS)

    Mochalskyy, S.; Wünderlich, D.; Ruf, B.; Franzen, P.; Fantz, U.; Minea, T.

    2014-02-01

    Decreasing the co-extracted electron current while simultaneously keeping negative ion (NI) current sufficiently high is a crucial issue on the development plasma source system for ITER Neutral Beam Injector. To support finding the best extraction conditions the 3D Particle-in-Cell Monte Carlo Collision electrostatic code ONIX (Orsay Negative Ion eXtraction) has been developed. Close collaboration with experiments and other numerical models allows performing realistic simulations with relevant input parameters: plasma properties, geometry of the extraction aperture, full 3D magnetic field map, etc. For the first time ONIX has been benchmarked with commercial positive ions tracing code KOBRA3D. A very good agreement in terms of the meniscus position and depth has been found. Simulation of NI extraction with different e/NI ratio in bulk plasma shows high relevance of the direct negative ion extraction from the surface produced NI in order to obtain extracted NI current as in the experimental results from BATMAN testbed.

  13. Fabrication of cerebral aneurysm simulator with a desktop 3D printer

    PubMed Central

    Liu, Yu; Gao, Qing; Du, Song; Chen, ZiChen; Fu, JianZhong; Chen, Bing; Liu, ZhenJie; He, Yong

    2017-01-01

    Now, more and more patients are suffering cerebral aneurysm. However, long training time limits the rapid growth of cerebrovascular neurosurgeons. Here we developed a novel cerebral aneurysm simulator which can be better represented the dynamic bulging process of cerebral aneurysm The proposed simulator features the integration of a hollow elastic vascular model, a skull model and a brain model, which can be affordably fabricated at the clinic (Fab@Clinic), under $25.00 each with the help of a low-cost desktop 3D printer. Moreover, the clinical blood flow and pulsation pressure similar to the human can be well simulated, which can be used to train the neurosurgical residents how to clip aneurysms more effectively. PMID:28513626

  14. Balloon Ascent: 3-D Simulation Tool for the Ascent and Float of High-Altitude Balloons

    NASA Technical Reports Server (NTRS)

    Farley, Rodger E.

    2005-01-01

    The BalloonAscent balloon flight simulation code represents a from-scratch development using Visual Basic 5 as the software platform. The simulation code is a transient analysis of balloon flight, predicting the skin and gas temperatures along with the 3-D position and velocity in a time and spatially varying environment. There are manual and automated controls for gas valving and the dropping of ballast. Also, there are many handy calculators, such as appropriate free lift, and steady-state thermal solutions with temperature gradients. The strength of this simulation model over others in the past is that the infrared environment is deterministic rather than guessed at. The ground temperature is specified along with the emissivity, which creates a ground level IR environment that is then partially absorbed as it travels upward through the atmosphere to the altitude of the balloon.

  15. Fabrication of cerebral aneurysm simulator with a desktop 3D printer

    NASA Astrophysics Data System (ADS)

    Liu, Yu; Gao, Qing; Du, Song; Chen, Zichen; Fu, Jianzhong; Chen, Bing; Liu, Zhenjie; He, Yong

    2017-05-01

    Now, more and more patients are suffering cerebral aneurysm. However, long training time limits the rapid growth of cerebrovascular neurosurgeons. Here we developed a novel cerebral aneurysm simulator which can be better represented the dynamic bulging process of cerebral aneurysm The proposed simulator features the integration of a hollow elastic vascular model, a skull model and a brain model, which can be affordably fabricated at the clinic (Fab@Clinic), under $25.00 each with the help of a low-cost desktop 3D printer. Moreover, the clinical blood flow and pulsation pressure similar to the human can be well simulated, which can be used to train the neurosurgical residents how to clip aneurysms more effectively.

  16. A 3D technique for simulation of irregular electron treatment fields using a digital camera

    SciTech Connect

    Bassalow, Roustem; Sidhu, Narinder P

    2003-09-30

    Cerrobend inserts, which define electron field apertures, are manufactured at our institution using perspex templates. Contours are reproduced manually on these templates at the simulator from the field outlines drawn on the skin or mask of a patient. A previously reported technique for simulation of electron treatment fields uses a digital camera to eliminate the need for such templates. However, avoidance of the image distortions introduced by non-flat surfaces on which the electron field outlines were drawn could only be achieved by limiting the application of this technique to surfaces which were flat or near flat. We present a technique that employs a digital camera and allows simulation of electron treatment fields contoured on an anatomical surface of an arbitrary three-dimensional (3D) shape, such as that of the neck, extremities, face, or breast. The procedure is fast, accurate, and easy to perform.

  17. pF3D Simulations of SBS and SRS in NIF Hohlraum Experiments

    NASA Astrophysics Data System (ADS)

    Langer, Steven; Strozzi, David; Amendt, Peter; Chapman, Thomas; Hopkins, Laura; Kritcher, Andrea; Sepke, Scott

    2016-10-01

    We present simulations of stimulated Brillouin scattering (SBS) and stimulated Raman scattering (SRS) for NIF experiments using high foot pulses in cylindrical hohlraums and for low foot pulses in rugby-shaped hohlraums. We use pF3D, a massively-parallel, paraxial-envelope laser plasma interaction code, with plasma profiles obtained from the radiation-hydrodynamics codes Lasnex and HYDRA. We compare the simulations to experimental data for SBS and SRS power and spectrum. We also show simulated SRS and SBS intensities at the target chamber wall and report the fraction of the backscattered light that passes through and misses the lenses. Work performed under the auspices of the U.S. Department of Energy by LLNL under Contract DE-AC52-07NA27344. Release number LLNL-ABS-697482.

  18. M3D-K simulations of sawteeth and energetic particle transport in tokamak plasmas

    SciTech Connect

    Shen, Wei; Sheng, Zheng-Mao; Fu, G. Y.; Breslau, J. A.; Wang, Feng

    2014-09-15

    Nonlinear simulations of sawteeth and related energetic particle transport are carried out using the kinetic/magnetohydrodynamic (MHD) hybrid code M3D-K. MHD simulations show repeated sawtooth cycles for a model tokamak equilibrium. Furthermore, test particle simulations are carried out to study the energetic particle transport due to a sawtooth crash. The results show that energetic particles are redistributed radially in the plasma core, depending on pitch angle and energy. For trapped particles, the redistribution occurs for particle energy below a critical value in agreement with existing theories. For co-passing particles, the redistribution is strong with little dependence on particle energy. In contrast, the redistribution level of counter-passing particles decreases with increasing particle energy.

  19. 3D Integration of MEMS and IC: Design, Technology and Simulations

    NASA Astrophysics Data System (ADS)

    Taklo, Maaike M. V.; Schjølberg-Henriksen, Kari; Lietaer, Nicolas; Prainsack, Josef; Elfving, Anders; Weber, Josef; Klein, Matthias; Schneider, Peter; Reitz, Sven

    A 3D integrated silicon stack consisting of two MEMS devices and two IC devices is presented. The MEMS devices are a pressure sensor and a bulk acoustic resonator (BAR). The stack was constructed for a tire pressure monitoring system (TPMS) which was one out of three demonstrators for an EU funded project called e-CUBES. Thermal simulations were performed to check the level of thermo-mechanical stresses induced on the pressure sensor membrane during extreme environmental conditions. Additional simulations were made to calculate the exact temperature on the BAR device during operation as this was important for the operational frequency. This paper presents and discusses the technology choices made for the stacking of the pressure sensor and the BAR. Results are given from simulations, initial short-loop experiments and for the final stacking.

  20. Jupiter Magnetotail Interaction with a Variable Solar Wind: A 3D MHD Simulation

    NASA Astrophysics Data System (ADS)

    Ranquist, D. A.; Bagenal, F.; Delamere, P. A.; Ma, X.

    2015-12-01

    Jupiter's magnetosphere is the largest object within the heliosphere. Voyager 2 detected its influence at Saturn's orbit, 4.3 AU away. It takes considerable time, therefore, for the solar wind to propagate such lengths down the tail. This propagation time is much greater than typical periods between changes in direction of the interplanetary magnetic field (IMF). We expect these variable magnetic fields to create a jumbled structure in Jupiter's magnetotail, resulting in magnetic reconnection and other magnetic processes. We simulate the global interaction of the solar wind with Jupiter's magnetosphere using a 3D magnetohydrodynamics (MHD) code. Delamere & Bagenal (2010) argue that the interaction is largely viscous, so we simulate the jovian magnetosphere as a region where the momentum equation has an added loss term. We also use in situ data gathered by the Ulysses spacecraft near Jupiter's orbit for solar wind input. Here, we report on the simulated dynamics in Jupiter's tail region.

  1. Fabrication of cerebral aneurysm simulator with a desktop 3D printer.

    PubMed

    Liu, Yu; Gao, Qing; Du, Song; Chen, ZiChen; Fu, JianZhong; Chen, Bing; Liu, ZhenJie; He, Yong

    2017-05-17

    Now, more and more patients are suffering cerebral aneurysm. However, long training time limits the rapid growth of cerebrovascular neurosurgeons. Here we developed a novel cerebral aneurysm simulator which can be better represented the dynamic bulging process of cerebral aneurysm The proposed simulator features the integration of a hollow elastic vascular model, a skull model and a brain model, which can be affordably fabricated at the clinic (Fab@Clinic), under $25.00 each with the help of a low-cost desktop 3D printer. Moreover, the clinical blood flow and pulsation pressure similar to the human can be well simulated, which can be used to train the neurosurgical residents how to clip aneurysms more effectively.

  2. Fully 3D Multiple Beam Dynamics Processes Simulation for the Fermilab Tevatron

    SciTech Connect

    Stern, E.; Amundson, J.; Spentzouris, P; Valishev, A.; /Fermilab

    2010-06-01

    The Fermilab Tevatron has been, until 2010, the premier high-energy physics collider in the world. The data collected over the last decade by high-energy physics experiments running at the Tevatron have been analyzed to make important measurements in fundamental areas such as B meson masses and flavor oscillation, searches for the Higgs boson, and supersymmetry. Collecting these data at the limits of detectability has required the Tevatron to operate reliably at high beam intensities to maximize the number of collisions to analyze. This impressive achievement has been assisted by the use of HPC resources and software provided through the SciDAC program. This paper describes the enhancements to the BeamBeam3d code to realistically simulate the Tevatron, the validation of these simulations, and the improvement in equipment reliability and personal safety achieved with the aid of simulations.

  3. Three-dimensional simulations of high-current beams in induction accelerators with WARP3d

    SciTech Connect

    Grote, D.P.; Friedman, A.; Haber, I.

    1995-09-01

    For many issues relevant to acceleration and propagation of heavy-ion beams for inertial confinement fusion, understanding the behavior of the beam requires the self-consistent inclusion of the self-fields of the beams in multiple dimensions. For these reasons, the three-dimensional simulation code WARP3d A.Friedman was developed. The code combines the particle-in-cell plasma simulation technique with a realistic description of the elements which make up an accelerator. In this paper, the general structure of the code is reviewed and details of two ongoing applications are presented along with a discussion of simulation techniques used. The most important results of this work are presented.

  4. 3D MHD Simulations of accreting neutron stars: evidence of QPO emission from the surface

    SciTech Connect

    Bachetti, Matteo; Burderi, Luciano; Romanova, Marina M.; Kulkarni, Akshay; Salvo, Tiziana di

    2010-07-15

    3D Magnetohydrodynamic simulations show that when matter accretes onto neutron stars, in particular if the misalignment angle is small, it does not constantly fall at a fixed spot. Instead, the location at which matter reaches the star moves. These moving hot spots can be produced both during stable accretion, where matter falls near the magnetic poles of the star, and unstable accretion, characterized by the presence of several tongues of matter which fall on the star near the equator, due to Rayleigh-Taylor instabilities. Precise modeling with Monte Carlo simulations shows that those movements could be observed as high frequency Quasi Periodic Oscillations. We performed a number of new simulation runs with a much wider set of parameters, focusing on neutron stars with a small misalignment angle. In most cases we observe oscillations whose frequency is correlated with the mass accretion rate M. Moreover, in some cases double QPOs appear, each of them showing the same correlation with M.

  5. Effect of Single-Electron Interface Trapping in Decanano MOSFETs: A 3D Atomistic Simulation Study

    NASA Technical Reports Server (NTRS)

    Asenov, Asen; Balasubramaniam, R.; Brown, A. R.; Davies, J. H.

    2000-01-01

    We study the effect of trapping/detrapping of a single-electron in interface states in the channel of n-type MOSFETs with decanano dimensions using 3D atomistic simulation techniques. In order to highlight the basic dependencies, the simulations are carried out initially assuming continuous doping charge, and discrete localized charge only for the trapped electron. The dependence of the random telegraph signal (RTS) amplitudes on the device dimensions and on the position of the trapped charge in the channel are studied in detail. Later, in full-scale, atomistic simulations assuming discrete charge for both randomly placed dopants and the trapped electron, we highlight the importance of current percolation and of traps with strategic position where the trapped electron blocks a dominant current path.

  6. 3-D Simulations of Plasma Wakefield Acceleration with Non-Idealized Plasmas and Beams

    SciTech Connect

    Deng, S.; Katsouleas, T.; Lee, S.; Muggli, P.; Mori, W.B.; Hemker, R.; Ren, C.; Huang, C.; Dodd, E.; Blue, B.E.; Clayton, C.E.; Joshi, C.; Wang, S.; Decker, F.J.; Hogan, M.J.; Iverson, R.H.; O'Connell, C.; Raimondi, P.; Walz, D.; /SLAC

    2005-09-27

    3-D Particle-in-cell OSIRIS simulations of the current E-162 Plasma Wakefield Accelerator Experiment are presented in which a number of non-ideal conditions are modeled simultaneously. These include tilts on the beam in both planes, asymmetric beam emittance, beam energy spread and plasma inhomogeneities both longitudinally and transverse to the beam axis. The relative importance of the non-ideal conditions is discussed and a worst case estimate of the effect of these on energy gain is obtained. The simulation output is then propagated through the downstream optics, drift spaces and apertures leading to the experimental diagnostics to provide insight into the differences between actual beam conditions and what is measured. The work represents a milestone in the level of detail of simulation comparisons to plasma experiments.

  7. Study of the internal magnetic field of Mercury through 3D hybrid simulations

    NASA Astrophysics Data System (ADS)

    Leclercq, Ludivine; Marcel Chanteur, Gerard; Modolo, Ronan; Leblanc, Francois; Schmidt, Carl; Langlais, Benoît; Thebault, Erwan

    2016-10-01

    In 1974, Mariner 10 discovered the intrinsic magnetic field of Mercury which interacts with the solar wind, leading to the formation of a magnetosphere. In spite of the recent MESSENGER observations, this magnetosphere remains quite unknown, especially in the Southern hemisphere. In order to improve our understanding of the Hermean magnetosphere, and to prepare the Bepi-Colombo mission (ESA/JAXA), we simulated the magnetized environment of Mercury using the model named LatHyS (LATMOS Hybrid Simulation). LatHyS is a 3D parallel multi-species hybrid code which has been applied to Mars, Titan and Ganymede, which has recently be improved by the implementation of a multi-grid method allowing to refine the spatial resolution near the planetary object (40 km in the case of Mercury). In order to investigate the Hermean environment, several hybrid simulations have been performed considering different internal field models, and results are compared with MESSENGER observations.

  8. 3D CFD simulations of trailing suction hopper dredger plume mixing: comparison with field measurements.

    PubMed

    de Wit, Lynyrd; Talmon, A M; van Rhee, C

    2014-11-15

    A 3D computational fluid dynamics (CFD) model is used to simulate mixing of an overflow plume within 400 m from a trailing suction hopper dredger (TSHD). The simulations are compared with new field measurements. It is the first time simulations of overflow dredging plumes are compared in such detail to field measurements this close to a TSHD. Seven cases with a large variety in overflow flux and plume characteristics are used. Measured maximum suspended sediment concentrations (SSC) vary between 30 and 500 mg/l and fluxes vary between 0.7% and 20% of the total overflow flux; the CFD model has, subject to the limitations of the field data, been shown to reproduce this in a satisfactory way. The model gives better understanding of important near field processes, which helps to assess the frequency, duration and intensity of stresses like turbidity and sedimentation needed to find the environmental impact of dredging projects. Copyright © 2014 Elsevier Ltd. All rights reserved.

  9. SVD-GFD scheme to simulate complex moving body problems in 3D space

    NASA Astrophysics Data System (ADS)

    Wang, X. Y.; Yu, P.; Yeo, K. S.; Khoo, B. C.

    2010-03-01

    The present paper presents a hybrid meshfree-and-Cartesian grid method for simulating moving body incompressible viscous flow problems in 3D space. The method combines the merits of cost-efficient and accurate conventional finite difference approximations on Cartesian grids with the geometric freedom of generalized finite difference (GFD) approximations on meshfree grids. Error minimization in GFD is carried out by singular value decomposition (SVD). The Arbitrary Lagrangian-Eulerian (ALE) form of the Navier-Stokes equations on convecting nodes is integrated by a fractional-step projection method. The present hybrid grid method employs a relatively simple mode of nodal administration. Nevertheless, it has the geometrical flexibility of unstructured mesh-based finite-volume and finite element methods. Boundary conditions are precisely implemented on boundary nodes without interpolation. The present scheme is validated by a moving patch consistency test as well as against published results for 3D moving body problems. Finally, the method is applied on low-Reynolds number flapping wing applications, where large boundary motions are involved. The present study demonstrates the potential of the present hybrid meshfree-and-Cartesian grid scheme for solving complex moving body problems in 3D.

  10. 2-D/3-D ECE imaging data for validation of turbulence simulations

    NASA Astrophysics Data System (ADS)

    Choi, Minjun; Lee, Jaehyun; Yun, Gunsu; Lee, Woochang; Park, Hyeon K.; Park, Young-Seok; Sabbagh, Steve A.; Wang, Weixing; Luhmann, Neville C., Jr.

    2015-11-01

    The 2-D/3-D KSTAR ECEI diagnostic can provide a local 2-D/3-D measurement of ECE intensity. Application of spectral analysis techniques to the ECEI data allows local estimation of frequency spectra S (f) , wavenumber spectra S (k) , wavernumber and frequency spectra S (k , f) , and bispectra b (f1 ,f2) of ECE intensity over the 2-D/3-D space, which can be used to validate turbulence simulations. However, the minimum detectable fluctuation amplitude and the maximum detectable wavenumber are limited by the temporal and spatial resolutions of the diagnostic system, respectively. Also, the finite measurement area of the diagnostic channel could introduce uncertainty in the spectra estimation. The limitations and accuracy of the ECEI estimated spectra have been tested by a synthetic ECEI diagnostic with the model and/or fluctuations calculated by GTS. Supported by the NRF of Korea under Contract No. NRF-2014M1A7A1A03029881 and NRF-2014M1A7A1A03029865 and by U.S. DOE grant DE-FG02-99ER54524.

  11. 3-D imaging and quantitative comparison of human dentitions and simulated bite marks.

    PubMed

    Blackwell, S A; Taylor, R V; Gordon, I; Ogleby, C L; Tanijiri, T; Yoshino, M; Donald, M R; Clement, J G

    2007-01-01

    This study presents a technique developed for 3-D imaging and quantitative comparison of human dentitions and simulated bite marks. A sample of 42 study models and the corresponding bites, made by the same subjects in acrylic dental wax, were digitised by laser scanning. This technique allows image comparison of a 3-D dentition with a 3-D bite mark, eliminating distortion due to perspective as experienced in conventional photography. Cartesian co-ordinates of a series of landmarks were used to describe the dentitions and bite marks, and a matrix was created to compare all possible combinations of matches and non-matches using cross-validation techniques. An algorithm, which estimated the probability of a dentition matching its corresponding bite mark, was developed. A receiver operating characteristic graph illustrated the relationship between values for specificity and sensitivity. This graph also showed for this sample that 15% of non-matches could not be distinguished from the true match, translating to a 15% probability of falsely convicting an innocent person.

  12. RV functional imaging: 3-D echo-derived dynamic geometry and flow field simulations.

    PubMed

    Pasipoularides, Ares D; Shu, Ming; Womack, Michael S; Shah, Ashish; Von Ramm, Olaf; Glower, Donald D

    2003-01-01

    We describe a novel functional imaging approach for quantitative analysis of right ventricular (RV) blood flow patterns in specific experimental animals (or humans) using real-time, three-dimensional (3-D) echocardiography (RT3D). The method is independent of the digital imaging modality used. It comprises three parts. First, a semiautomated segmentation aided by intraluminal contrast medium locates the RV endocardial surface. Second, a geometric scheme for dynamic RV chamber reconstruction applies a time interpolation procedure to the RT3D data to quantify wall geometry and motion at 400 Hz. A volumetric prism method validated the dynamic geometric reconstruction against simultaneous sonomicrometric canine measurements. Finally, the RV endocardial border motion information is used for mesh generation on a computational fluid dynamics solver to simulate development of the early RV diastolic inflow field. Boundary conditions (tessellated endocardial surface nodal velocities) for the solver are directly derived from the endocardial geometry and motion information. The new functional imaging approach may yield important kinematic information on the distribution of instantaneous velocities in the RV diastolic flow field of specific normal or diseased hearts.

  13. Recent Developments in the VISRAD 3-D Target Design and Radiation Simulation Code

    NASA Astrophysics Data System (ADS)

    Macfarlane, Joseph; Woodruff, P.; Golovkin, I.

    2011-10-01

    The 3-D view factor code VISRAD is widely used in designing HEDP experiments at major laser and pulsed-power facilities, including NIF, OMEGA, OMEGA-EP, ORION, Z, and PLX. It simulates target designs by generating a 3-D grid of surface elements, utilizing a variety of 3-D primitives and surface removal algorithms, and can be used to compute the radiation flux throughout the surface element grid by computing element-to-element view factors and solving power balance equations. Target set-up and beam pointing are facilitated by allowing users to specify positions and angular orientations using a variety of coordinates systems (e . g . , that of any laser beam, target component, or diagnostic port). Analytic modeling for laser beam spatial profiles for OMEGA DPPs and NIF CPPs is used to compute laser intensity profiles throughout the grid of surface elements. VISRAD includes a variety of user-friendly graphics for setting up targets and displaying results, can readily display views from any point in space, and can be used to generate image sequences for animations. We will discuss recent improvements to the software package and plans for future developments.

  14. Assessment of inlet efficiency through a 3D simulation: numerical and experimental comparison.

    PubMed

    Gómez, Manuel; Recasens, Joan; Russo, Beniamino; Martínez-Gomariz, Eduardo

    2016-10-01

    Inlet efficiency is a requirement for characterizing the flow transfers between surface and sewer flow during rain events. The dual drainage approach is based on the joint analysis of both upper and lower drainage levels, and the flow transfer is one of the relevant elements to define properly this joint behaviour. This paper presents the results of an experimental and numerical investigation about the inlet efficiency definition. A full scale (1:1) test platform located in the Technical University of Catalonia (UPC) reproduces both the runoff process in streets and the water entering the inlet. Data from tests performed on this platform allow the inlet efficiency to be estimated as a function of significant hydraulic and geometrical parameters. A reproduction of these tests through a numerical three-dimensional code (Flow-3D) has been carried out simulating this type of flow by solving the RANS equations. The aim of the work was to reproduce the hydraulic performance of a previously tested grated inlet under several flow and geometric conditions using Flow-3D as a virtual laboratory. This will allow inlet efficiencies to be obtained without previous experimental tests. Moreover, the 3D model allows a better understanding of the hydraulics of the flow interception and the flow patterns approaching the inlet.

  15. ShrinkWrap: 3D model abstraction for remote sensing simulation

    SciTech Connect

    Pope, Paul A

    2009-01-01

    Remote sensing simulations often require the use of 3D models of objects of interest. There are a multitude of these models available from various commercial sources. There are image processing, computational, database storage, and . data access advantages to having a regularized, encapsulating, triangular mesh representing the surface of a 3D object model. However, this is usually not how these models are stored. They can have too much detail in some areas, and not enough detail in others. They can have a mix of planar geometric primitives (triangles, quadrilaterals, n-sided polygons) representing not only the surface of the model, but also interior features. And the exterior mesh is usually not regularized nor encapsulating. This paper presents a method called SHRlNKWRAP which can be used to process 3D object models to achieve output models having the aforementioned desirable traits. The method works by collapsing an encapsulating sphere, which has a regularized triangular mesh on its surface, onto the surface of the model. A GUI has been developed to make it easy to leverage this capability. The SHRlNKWRAP processing chain and use of the GUI are described and illustrated.

  16. 3-D Simulations Of AGN Feedback via Radiation and Radiation-driven Outflows

    NASA Astrophysics Data System (ADS)

    Kurosawa, Ryuichi; Proga, D.

    2009-01-01

    We present numerical studies of non-axisymmetric, time-dependent gas hydrodynamic in a relatively large scale ( 10 pc). We consider the gas under the influence of the gravity of a super massive black hole (SMBH) and the radiation produced by a radiatively efficient flow accreting onto the SMBH. We examine two cases: (1) the formation of an outflow from the accretion of the ambient gas without rotation and (2) that with rotation. Our 3-D simulations of a non-rotating gas show small yet noticeable non-axisymmetric small-scale features inside the outflow; however, the outflow as a whole and the inflow do not seem to suffer from any large-scale instability. In the rotating case, the non-axisymmetric features are very prominent, especially in the outflow which consists of many cold dense clouds entrained in a smoother hot component. The 3-D outflow becomes non-axisymmetric due to the shear and thermal instabilities. We find that gas rotation increases the outflow thermal energy flux, but it reduces the outflow mass and kinetic energy fluxes and the outflow collimation. The virial mass estimated from the kinematics of the cold clouds found in our 3-D simulations of rotating gas underestimates the actual mass used in the simulations by about 40%. Overall the large scale outflow significantly reduces the rate at which mass accretes onto the SMBH. This work was supported by NASA through grant HST-AR-11276 from the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS5-26555.

  17. 3D CFDTD PIC Simulation Study on Low-Frequency Oscillations in a Gyrotron

    NASA Astrophysics Data System (ADS)

    Lin, M. C.; Smithe, D. N.

    2011-10-01

    Low-frequency oscillations (LFOs) have been observed in a high average power gyrotron and the trapped electron population contributing to the oscillation has been measured. As high average power gyrotrons are the most promising millimeter wave source for thermonuclear fusion research, it is important to get a better understanding of this parasitic phenomenon to avoid any deterioration of the electron beam quality thus reducing the gyrotron efficiency. However, understanding of the LFOs remains incomplete and a full picture of this parasitic phenomenon has not been seen yet. In this work, we use a 3D conformal finite-difference time-domain (CFDTD) particle-in-cell (PIC) method to accurately and efficiently study the LFOs in a magnetron injection gun (MIG) of a high average power gyrotron. Employing a highly parallelized computation, the model can be simulated in time domain more realistically. LFOs have been obtained in a 3D time domain simulation for the first time. From our preliminary simulation studies, it is found that not only magnetic compression profile but initial velocity or velocity ratio play an important role in the operation of a MIG electron gun. In addition, the secondary emission effects on the LFOs are also studied. Detailed results will be presented. Work supported by the U.S. Department of Energy under Grant No. DE-SC0004436.

  18. 3D numerical simulation of the evolutionary process of aeolian downsized crescent-shaped dunes

    NASA Astrophysics Data System (ADS)

    Zhou, Xiaosi; Zhang, Yang; Wang, Yuan; Li, Min

    2016-06-01

    A dune constitutive model was coupled with a large eddy simulation (LES) with the Smagorinsky subgrid-scale (SGS) model to accurately describe the evolutionary process of dunes from the macroscopic perspective of morphological dynamics. A 3D numerical simulation of the evolution of aeolian downsized crescent-shaped dunes was then performed. The evolution of the 3D structure of Gaussian-shaped dunes was simulated under the influence of gravity modulation, which was the same with the vertical oscillation of the sand bed to adjust the threshold of sand grain liftoff in wind tunnel experiments under the same wind speed. The influence of gravity modulation intensity on the characteristic scale parameter of the dune was discussed. Results indicated that the crescent shape of the dune was reproduced with the action of gravity during regulation of the saturation of wind-sand flow at specific times. The crescent shape was not dynamically maintained as time passed, and the dunes dwindled until they reached final decomposition because of wind erosion. The height of the dunes decreased over time, and the height-time curve converged as the intensity of modulation increased linearly. The results qualitatively agreed with those obtained from wind tunnel experiments.

  19. Aeroacoustic Simulation of a Nose Landing Gear in an Open Jet Facility Using FUN3D

    NASA Technical Reports Server (NTRS)

    Vatsa, Veer N.; Lockhard, David P.; Khorrami, Mehdi R.; Carlson, Jan-Renee

    2012-01-01

    Numerical simulations have been performed for a partially-dressed, cavity-closed nose landing gear configuration that was tested in NASA Langley s closed-wall Basic Aerodynamic Research Tunnel (BART) and in the University of Florida s open-jet acoustic facility known as UFAFF. The unstructured-grid flow solver, FUN3D, developed at NASA Langley Research center is used to compute the unsteady flow field for this configuration. A hybrid Reynolds-averaged Navier-Stokes/large eddy simulation (RANS/LES) turbulence model is used for these computations. Time-averaged and instantaneous solutions compare favorably with the measured data. Unsteady flowfield data obtained from the FUN3D code are used as input to a Ffowcs Williams-Hawkings noise propagation code to compute the sound pressure levels at microphones placed in the farfield. Significant improvement in predicted noise levels is obtained when the flowfield data from the open jet UFAFF simulations is used as compared to the case using flowfield data from the closed-wall BART configuration.

  20. 3D printing of tissue-simulating phantoms for calibration of biomedical optical devices

    NASA Astrophysics Data System (ADS)

    Zhao, Zuhua; Zhou, Ximing; Shen, Shuwei; Liu, Guangli; Yuan, Li; Meng, Yuquan; Lv, Xiang; Shao, Pengfei; Dong, Erbao; Xu, Ronald X.

    2016-10-01

    Clinical utility of many biomedical optical devices is limited by the lack of effective and traceable calibration methods. Optical phantoms that simulate biological tissues used for optical device calibration have been explored. However, these phantoms can hardly simulate both structural and optical properties of multi-layered biological tissue. To address this limitation, we develop a 3D printing production line that integrates spin coating, light-cured 3D printing and Fused Deposition Modeling (FDM) for freeform fabrication of optical phantoms with mechanical and optical heterogeneities. With the gel wax Polydimethylsiloxane (PDMS), and colorless light-curable ink as matrix materials, titanium dioxide (TiO2) powder as the scattering ingredient, graphite powder and black carbon as the absorption ingredient, a multilayer phantom with high-precision is fabricated. The absorption and scattering coefficients of each layer are measured by a double integrating sphere system. The results demonstrate that the system has the potential to fabricate reliable tissue-simulating phantoms to calibrate optical imaging devices.

  1. High-resolution 3D simulations of NIF ignition targets performed on Sequoia with HYDRA

    NASA Astrophysics Data System (ADS)

    Marinak, M. M.; Clark, D. S.; Jones, O. S.; Kerbel, G. D.; Sepke, S.; Patel, M. V.; Koning, J. M.; Schroeder, C. R.

    2015-11-01

    Developments in the multiphysics ICF code HYDRA enable it to perform large-scale simulations on the Sequoia machine at LLNL. With an aggregate computing power of 20 Petaflops, Sequoia offers an unprecedented capability to resolve the physical processes in NIF ignition targets for a more complete, consistent treatment of the sources of asymmetry. We describe modifications to HYDRA that enable it to scale to over one million processes on Sequoia. These include new options for replicating parts of the mesh over a subset of the processes, to avoid strong scaling limits. We consider results from a 3D full ignition capsule-only simulation performed using over one billion zones run on 262,000 processors which resolves surface perturbations through modes l = 200. We also report progress towards a high-resolution 3D integrated hohlraum simulation performed using 262,000 processors which resolves surface perturbations on the ignition capsule through modes l = 70. These aim for the most complete calculations yet of the interactions and overall impact of the various sources of asymmetry for NIF ignition targets. This work was performed under the auspices of the Lawrence Livermore National Security, LLC, (LLNS) under Contract No. DE-AC52-07NA27344.

  2. Interaction of a Variable Solar Wind with Jupiter's Magnetosphere: A 3D MHD Simulation

    NASA Astrophysics Data System (ADS)

    Ranquist, D. A.; Bagenal, F.; Delamere, P. A.; Ma, X.

    2016-12-01

    Jupiter's magnetosphere is the largest obstacle for the solar wind in the solar system. Voyager 2 even detected its presence on its approach to Saturn, 4.3 AU from Jupiter. Also, the time scale for the interplanetary magnetic field (IMF) to change directions is smaller than the time for the solar wind to propagate the entire length of Jupiter's magnetotail. Due to the large spatial extent and long time scales, varied solar wind conditions are expected to interact with Jupiter's magnetosphere simultaneously, which can lead to magnetic reconnection and other plasma phenomena. Using the FLASH 3D magnetohydrodynamics (MHD) code, we have simulated the global interaction between a variable solar wind and Jupiter's magnetosphere. We simulated Jupiter's magnetosphere as a viscous obstacle because of arguments made by Delamere & Bagenal (2010). For the solar wind, we used in situ data from the Ulysses spacecraft taken at 5 AU along the ecliptic plane. Here we present the 3D MHD simulation results with alternating IMF directions for several obstacle viscosities.

  3. RF study and 3-D simulations of a side-coupling thermionic RF-gun

    NASA Astrophysics Data System (ADS)

    Rimjaem, S.; Kusoljariyakul, K.; Thongbai, C.

    2014-02-01

    A thermionic RF-gun for generating ultra-short electron bunches was optimized, developed and used as a source at a linac-based THz radiation research laboratory of the Plasma and Beam Physics Research Facility, Chiang Mai University, Thailand. The RF-gun is a π/2-mode standing wave structure, which consists of two S-band accelerating cells and a side-coupling cavity. The 2856 MHz RF wave is supplied from an S-band klystron to the gun through the waveguide input-port at the cylindrical wall of the second cell. A fraction of the RF power is coupled from the second cell to the first one via a side-coupling cavity. Both the waveguide input-port and the side-coupling cavity lead to an asymmetric geometry of the gun. RF properties and electromagnetic field distributions inside the RF-gun were studied and numerically simulated by using computer codes SUPERFISH 7.19 and CST Microwave Studio 2012©. RF characterizations and tunings of the RF-gun were performed to ensure the reliability of the gun operation. The results from 3D simulations and measurements are compared and discussed in this paper. The influence of asymmetric field distributions inside the RF-gun on the electron beam properties was investigated via 3D beam dynamics simulations. A change in the coupling-plane of the side-coupling cavity is suggested to improve the gun performance.

  4. BioFVM: an efficient, parallelized diffusive transport solver for 3-D biological simulations

    PubMed Central

    Ghaffarizadeh, Ahmadreza; Friedman, Samuel H.; Macklin, Paul

    2016-01-01

    Motivation: Computational models of multicellular systems require solving systems of PDEs for release, uptake, decay and diffusion of multiple substrates in 3D, particularly when incorporating the impact of drugs, growth substrates and signaling factors on cell receptors and subcellular systems biology. Results: We introduce BioFVM, a diffusive transport solver tailored to biological problems. BioFVM can simulate release and uptake of many substrates by cell and bulk sources, diffusion and decay in large 3D domains. It has been parallelized with OpenMP, allowing efficient simulations on desktop workstations or single supercomputer nodes. The code is stable even for large time steps, with linear computational cost scalings. Solutions are first-order accurate in time and second-order accurate in space. The code can be run by itself or as part of a larger simulator. Availability and implementation: BioFVM is written in C ++ with parallelization in OpenMP. It is maintained and available for download at http://BioFVM.MathCancer.org and http://BioFVM.sf.net under the Apache License (v2.0). Contact: paul.macklin@usc.edu. Supplementary information: Supplementary data are available at Bioinformatics online. PMID:26656933

  5. Aeroacoustic Simulation of Nose Landing Gear on Adaptive Unstructured Grids With FUN3D

    NASA Technical Reports Server (NTRS)

    Vatsa, Veer N.; Khorrami, Mehdi R.; Park, Michael A.; Lockard, David P.

    2013-01-01

    Numerical simulations have been performed for a partially-dressed, cavity-closed nose landing gear configuration that was tested in NASA Langley s closed-wall Basic Aerodynamic Research Tunnel (BART) and in the University of Florida's open-jet acoustic facility known as the UFAFF. The unstructured-grid flow solver FUN3D, developed at NASA Langley Research center, is used to compute the unsteady flow field for this configuration. Starting with a coarse grid, a series of successively finer grids were generated using the adaptive gridding methodology available in the FUN3D code. A hybrid Reynolds-averaged Navier-Stokes/large eddy simulation (RANS/LES) turbulence model is used for these computations. Time-averaged and instantaneous solutions obtained on these grids are compared with the measured data. In general, the correlation with the experimental data improves with grid refinement. A similar trend is observed for sound pressure levels obtained by using these CFD solutions as input to a FfowcsWilliams-Hawkings noise propagation code to compute the farfield noise levels. In general, the numerical solutions obtained on adapted grids compare well with the hand-tuned enriched fine grid solutions and experimental data. In addition, the grid adaption strategy discussed here simplifies the grid generation process, and results in improved computational efficiency of CFD simulations.

  6. Exploratory Analysis Of The 3D Cloud Resolving Model Simulations of TOGA COARE: Preliminary Results

    NASA Astrophysics Data System (ADS)

    Mendes, S.; Bretherton, C.

    2007-12-01

    Global climate model studies suggest that cumulus momentum transport (CMT) in tropical oceanic convective cloud systems plays a significant role in the tropical mean circulation and transient variability. CMT is difficult to measure directly and can depend on the detailed structure and organization of the convection. Yet there have been comparatively few evaluations of CMT parameterizations and the assumptions underlying them using 3D cloud resolving model (CRM) simulations. We have analyzed CMT in a four month 3D 64x64x64 gridpoint CRM simulation of TOGA COARE with 1 km horizontal resolution. An additional 256x256x64 large-domain simulation was performed for a 10 day subperiod with strong convection combined with substantial mean vertical zonal wind shear, conditions favorably for strong CMT. Both simulations were identically forced with prescribed vertical motion, horizontal temperature and moisture advection, and relaxation of the domain-mean wind profile to observations on a one-hour timescale. Both were initialized with small amplitude white noise, but spun up realistic convection in less than a day. The domain-mean CMT in the small and large domain simulations for the 10-day common simulation period was compared. The two simulations showed remarkably similar CMT profiles on daily-mean timescales, suggesting that mesoscale contributions to CMT of scales greater than 64 km were small. The skill of a downgradient mixing-length parameterization CMT = Mc*L*DU/Dz was also tested. Here , Mc is convective mass flux, dU/dz is mean vertical shear, and L is a mixing length for updraft zonal velocity perturbations associated with entrainment and horizontal pressure gradient accelerations. This was done by regressing CMT at each height was regressed against Mc*DU/Dz at the same height across all 3D model snapshots over the 10 days. The correlation coefficient describes the accuracy of this downgradient parameterization, and L was calculated as the regression slope. In the

  7. 3D Simulation of an Audible Ultrasonic Electrolarynx Using Difference Waves

    PubMed Central

    Mills, Patrick; Zara, Jason

    2014-01-01

    A total laryngectomy removes the vocal folds which are fundamental in forming voiced sounds that make speech possible. Although implanted prosthetics are commonly used in developed countries, simple handheld vibrating electrolarynxes are still common worldwide. These devices are easy to use but suffer from many drawbacks including dedication of a hand, mechanical sounding voice, and sound leakage. To address some of these drawbacks, we introduce a novel electrolarynx that uses vibro-acoustic interference of dual ultrasonic waves to generate an audible fundamental frequency. A 3D simulation of the principles of the device is presented in this paper. PMID:25401965

  8. 3-D Hybrid Simulation of Quasi-Parallel Bow Shock and Its Effects on the Magnetosphere

    SciTech Connect

    Lin, Y.; Wang, X.Y.

    2005-08-01

    A three-dimensional (3-D) global-scale hybrid simulation is carried out for the structure of the quasi-parallel bow shock, in particular the foreshock waves and pressure pulses. The wave evolution and interaction with the dayside magnetosphere are discussed. It is shown that diamagnetic cavities are generated in the turbulent foreshock due to the ion beam plasma interaction, and these compressional pulses lead to strong surface perturbations at the magnetopause and Alfven waves/field line resonance in the magnetosphere.

  9. Pneumoperitoneum technique simulation in laparoscopic surgery on lamb liver samples and 3D reconstruction.

    PubMed

    Martínez-Martínez, F; Rupérez, M J; Lago, M A; López-Mir, F; Monserrat, C; Alcañíz, M

    2011-01-01

    In this paper, a procedure to experimentally simulate the behavior of the liver when the pneumoperitoneum technique is applied in laparoscopic surgery is presented, as well as methodology to make the comparison of each sample before and after insufflating the gas. This comparison is carried out using the 3D reconstruction of the volume from the CT images when either pneumoperitoneum is applied and when it is not. This methodology has showed that there are perceptible changes of volume when the pneumoperitoneum is applied.

  10. Parallel implementation of the FETI-DPEM algorithm for general 3D EM simulations

    NASA Astrophysics Data System (ADS)

    Li, Yu-Jia; Jin, Jian-Ming

    2009-05-01

    A parallel implementation of the electromagnetic dual-primal finite element tearing and interconnecting algorithm (FETI-DPEM) is designed for general three-dimensional (3D) electromagnetic large-scale simulations. As a domain decomposition implementation of the finite element method, the FETI-DPEM algorithm provides fully decoupled subdomain problems and an excellent numerical scalability, and thus is well suited for parallel computation. The parallel implementation of the FETI-DPEM algorithm on a distributed-memory system using the message passing interface (MPI) is discussed in detail along with a few practical guidelines obtained from numerical experiments. Numerical examples are provided to demonstrate the efficiency of the parallel implementation.

  11. 3D Simulations for a Micron-Scale, Dielectric-Based Acceleration Experiment

    SciTech Connect

    Yoder, R. B.; Travish, G.; Xu Jin; Rosenzweig, J. B.

    2009-01-22

    An experimental program to demonstrate a dielectric, slab-symmetric accelerator structure has been underway for the past two years. These resonant devices are driven by a side-coupled 800-nm laser and can be configured to maintain the field profile necessary for synchronous acceleration and focusing of relativistic or nonrelativistic particles. We present 3D simulations of various versions of the structure geometry, including a metal-walled structure relevant to ongoing cold tests on resonant properties, and an all-dielectric structure to be constructed for a proof-of-principle acceleration experiment.

  12. Numerical simulation of a combined oxidation ditch flow using 3D k-epsilon turbulence model.

    PubMed

    Luo, Lin; Li, Wei-min; Deng, Yong-sen; Wang, Tao

    2005-01-01

    The standard three dimensional(3D) k-epsilon turbulence model was applied to simulate the flow field of a small scale combined oxidation ditch. The moving mesh approach was used to model the rotor of the ditch. Comparison of the computed and the measured data is acceptable. A vertical reverse flow zone in the ditch was found, and it played a very important role in the ditch flow behavior. The flow pattern in the ditch is discussed in detail, and approaches are suggested to improve the hydrodynamic performance in the ditch.

  13. A uniform input data convention for the CALL 3-D crash victim simulation

    NASA Astrophysics Data System (ADS)

    Shaibani, S. J.

    1982-07-01

    Logical schemes for the labelling of planes (cards D) and functions (cards E) in the input decks used for the Calspan 3-D Crash Victim Simulation (CVS) program are proposed. One benefit of introducing such a standardized format for these inputs would be to facilitate greatly the interchange of data for different vehicles. A further advantage would be that the table of allowed contacts (cards F) could remain largely unaltered. It is hoped that the uniformity of the convention described by these schemes would help to promote the exchange of readily usable data between CVS users.

  14. Terascale direct numerical simulations of turbulent combustion using S3D.

    SciTech Connect

    Sankaran, Ramanan; Mellor-Crummy, J.; DeVries, M.; Yoo, Chun Sang; Ma, K. L.; Podhorski, N.; Liao, W. K.; Klasky, S.; de Supinski, B.; Choudhary, A.; Hawkes, Evatt R.; Chen, Jacqueline H.; Shende, Sameer

    2008-08-01

    Computational science is paramount to the understanding of underlying processes in internal combustion engines of the future that will utilize non-petroleum-based alternative fuels, including carbon-neutral biofuels, and burn in new combustion regimes that will attain high efficiency while minimizing emissions of particulates and nitrogen oxides. Next-generation engines will likely operate at higher pressures, with greater amounts of dilution and utilize alternative fuels that exhibit a wide range of chemical and physical properties. Therefore, there is a significant role for high-fidelity simulations, direct numerical simulations (DNS), specifically designed to capture key turbulence-chemistry interactions in these relatively uncharted combustion regimes, and in particular, that can discriminate the effects of differences in fuel properties. In DNS, all of the relevant turbulence and flame scales are resolved numerically using high-order accurate numerical algorithms. As a consequence terascale DNS are computationally intensive, require massive amounts of computing power and generate tens of terabytes of data. Recent results from terascale DNS of turbulent flames are presented here, illustrating its role in elucidating flame stabilization mechanisms in a lifted turbulent hydrogen/air jet flame in a hot air co-flow, and the flame structure of a fuel-lean turbulent premixed jet flame. Computing at this scale requires close collaborations between computer and combustion scientists to provide optimized scaleable algorithms and software for terascale simulations, efficient collective parallel I/O, tools for volume visualization of multiscale, multivariate data and automating the combustion workflow. The enabling computer science, applied to combustion science, is also required in many other terascale physics and engineering simulations. In particular, performance monitoring is used to identify the performance of key kernels in the DNS code, S3D and especially memory

  15. Simulated square kilometre array maps from Galactic 3D-emission models

    NASA Astrophysics Data System (ADS)

    Sun, X. H.; Reich, W.

    2009-11-01

    Context: Planning of the Square Kilometre Array (SKA) requires simulations of the expected sky emission at arcsec angular resolution to evaluate its scientific potential, to constrain its technical realization in the best possible way, and to guide the observing strategy. Aims: We simulate high-resolution total intensity, polarization, and rotation measure (RM) maps of selected fields based on our recent global 3D-model of Galactic emission. Methods: Simulations of diffuse Galactic emission were conducted using the hammurabi code modified for arcsec angular resolution patches towards various Galactic directions. The random magnetic field components are set to follow a Kolmogorov-like power-law spectrum. We analysed the simulated maps in terms of their probability density functions (PDFs) and structure functions. Results: We present maps for various Galactic longitudes and latitudes at 1.4 GHz, which is the frequency where deep SKA surveys are proposed. The maps are about 1.5 ° in size and have an angular resolution of about 1.6 °. Total intensity emission is smoother in the plane than at high latitudes because of the different contributions from the regular and random magnetic field. The high-latitude fields show more extended polarized emission and RM structures than those in the plane, where patchy emission structures dominate on very small scales. The RM PDFs in the plane are close to Gaussians, but clearly deviate from that at high latitudes. The RM structure functions show smaller amplitudes and steeper slopes towards high latitudes. These results emerge from much more turbulent cells being passed through by the line-of-sights in the plane. Although the simulated random magnetic field components distribute in 3D, the magnetic field spectrum extracted from the structure functions of RMs conforms to 2D in the plane and approaches 3D at high latitudes. This is partly related to the outer scale of the turbulent magnetic field, but mainly to the different lengths

  16. Terascale direct numerical simulations of turbulent combustion using S3D

    NASA Astrophysics Data System (ADS)

    Chen, J. H.; Choudhary, A.; de Supinski, B.; DeVries, M.; Hawkes, E. R.; Klasky, S.; Liao, W. K.; Ma, K. L.; Mellor-Crummey, J.; Podhorszki, N.; Sankaran, R.; Shende, S.; Yoo, C. S.

    2009-01-01

    Computational science is paramount to the understanding of underlying processes in internal combustion engines of the future that will utilize non-petroleum-based alternative fuels, including carbon-neutral biofuels, and burn in new combustion regimes that will attain high efficiency while minimizing emissions of particulates and nitrogen oxides. Next-generation engines will likely operate at higher pressures, with greater amounts of dilution and utilize alternative fuels that exhibit a wide range of chemical and physical properties. Therefore, there is a significant role for high-fidelity simulations, direct numerical simulations (DNS), specifically designed to capture key turbulence-chemistry interactions in these relatively uncharted combustion regimes, and in particular, that can discriminate the effects of differences in fuel properties. In DNS, all of the relevant turbulence and flame scales are resolved numerically using high-order accurate numerical algorithms. As a consequence terascale DNS are computationally intensive, require massive amounts of computing power and generate tens of terabytes of data. Recent results from terascale DNS of turbulent flames are presented here, illustrating its role in elucidating flame stabilization mechanisms in a lifted turbulent hydrogen/air jet flame in a hot air coflow, and the flame structure of a fuel-lean turbulent premixed jet flame. Computing at this scale requires close collaborations between computer and combustion scientists to provide optimized scaleable algorithms and software for terascale simulations, efficient collective parallel I/O, tools for volume visualization of multiscale, multivariate data and automating the combustion workflow. The enabling computer science, applied to combustion science, is also required in many other terascale physics and engineering simulations. In particular, performance monitoring is used to identify the performance of key kernels in the DNS code, S3D and especially memory

  17. Insights from 3D numerical simulations on the dynamics of the India-Asia collision zone

    NASA Astrophysics Data System (ADS)

    Pusok, A. E.; Kaus, B.; Popov, A.

    2013-12-01

    The dynamics of the India-Asia collision zone remains one of the most remarkable topics of the current research interest: the transition from subduction to collision and uplift, followed by the rise of the abnormally thick Tibetan plateau, and the deformation at its Eastern and Western syntaxes, are processes still not fully understood. Models that have addressed this topic include wholescale underthrusting of Indian lithospheric mantle under Tibet, distributed homogeneous shortening or the thin-sheet model, slip-line field model for lateral extrusion or lower crustal flow models for the exhumation of the Himalayan units and lateral spreading of the Tibetan plateau. Of these, the thin-sheet model has successfully illustrated some of the basic physics of continental collision and has the advantage of a 3D model being reduced to 2D, but one of its major shortcomings is that it cannot simultaneously represent channel flow and gravitational collapse of the mantle lithosphere, since these mechanisms require the lithosphere to interact with the underlying mantle, or to have a vertically non-homogeneous rheology. As a consequence, 3D models are emerging as powerful tools to understand the dynamics of coupled systems. However, because of yet recent developments and various complexities, the current 3D models simulating the dynamics of continent collision zones have relied on certain explicit assumptions, such as replacing part of the asthenosphere with various types of boundary conditions that mimic the effect of mantle flow, in order to focus on the lithospheric/crustal deformation. Here, we employ the parallel 3D code LaMEM (Lithosphere and Mantle Evolution Model), with a finite difference staggered grid solver, which is capable of simulating lithospheric deformation while simultaneously taking mantle flow and a free surface into account. We present qualitative results on lithospheric and upper-mantle scale simulations in which the Indian lithosphere is subducted and

  18. Fully kinetic 3D simulations of the Hermean magnetosphere under realistic conditions: a new approach

    NASA Astrophysics Data System (ADS)

    Amaya, Jorge; Gonzalez-Herrero, Diego; Lembège, Bertrand; Lapenta, Giovanni

    2017-04-01

    Simulations of the magnetosphere of planets are usually performed using the MHD and the hybrid approaches. However, these two methods still rely on approximations for the computation of the pressure tensor, and require the neutrality of the plasma at every point of the domain by construction. These approximations undermine the role of electrons on the emergence of plasma features in the magnetosphere of planets. The high mobility of electrons, their characteristic time and space scales, and the lack of perfect neutrality, are the source of many observed phenomena in the magnetospheres, including the turbulence energy cascade, the magnetic reconnection, the particle acceleration in the shock front and the formation of current systems around the magnetosphere. Fully kinetic codes are extremely demanding of computing time, and have been unable to perform simulations of the full magnetosphere at the real scales of a planet with realistic plasma conditions. This is caused by two main reasons: 1) explicit codes must resolve the electron scales limiting the time and space discretisation, and 2) current versions of semi-implicit codes are unstable for cell sizes larger than a few Debye lengths. In this work we present new simulations performed with ECsim, an Energy Conserving semi-implicit method [1], that can overcome these two barriers. We compare the solutions obtained with ECsim with the solutions obtained by the classic semi-implicit code iPic3D [2]. The new simulations with ECsim demand a larger computational effort, but the time and space discretisations are larger than those in iPic3D allowing for a faster simulation time of the full planetary environment. The new code, ECsim, can reach a resolution allowing the capture of significant large scale physics without loosing kinetic electron information, such as wave-electron interaction and non-Maxwellian electron velocity distributions [3]. The code is able to better capture the thickness of the different boundary

  19. A 3-D nonisothermal flow simulation and pulling force model for injection pultrusion processes

    NASA Astrophysics Data System (ADS)

    Mustafa, Ibrahim

    1998-12-01

    Injected Pultrusion (IP) is an efficient way of producing high quality, low cost, high volume and constant cross-section polymeric composites. This process has been developed recently, and the efforts to optimize it are still underway. This work is related to the development of a 3-D non-isothermal flow model for the IP processes. The governing equations for transport of mass, momentum and, energy are formulated by using a local volume averaging approach, and the Finite Element/Control Volume method is used to solve the system of equations numerically. The chemical species balance equation is solved in the Lagrangian frame of reference whereas the energy equation is solved using Galerkin, SU (Streamline Upwind), and SUPG (Streamline Upwind Petrov Galerkin) approaches. By varying degrees of freedom and the flow rates of the resin, it is shown that at high Peclet numbers the SUPG formulation performs better than the SU and the Galerkin methods in all cases. The 3-D model predictions for degree of cure and temperature are compared with a one dimensional analytical solution and the results are found satisfactory. Moreover, by varying the Brinkman Number, it is shown that the effect of viscous dissipation is insignificant. The 3-D flow simulations have been carried out for both thin and thick parts and the results are compared with the 2-D model. It is shown that for thick parts 2-D simulations render erroneous results. The effect of changing permeability on the flow fronts is also addressed. The effect of increasing taper angle on the model prediction is also investigated. A parametric study is conducted to isolate optimum conditions for both isothermal and non-isothermal cases using a straight rectangular die and a die with a tapered inlet. Finally, a simple pulling force model is developed and the pulling force required to pull the carbon-epoxy fiber resin system is estimated for dies of varying tapered inlet.

  20. Photon propagation correction in 3D photoacoustic image reconstruction using Monte Carlo simulation

    NASA Astrophysics Data System (ADS)

    Cheong, Yaw Jye; Stantz, Keith M.

    2010-02-01

    Purpose: The purpose of this study is to develop a new 3-D iterative Monte Carlo algorithm to recover the heterogeneous distribution of molecular absorbers with a solid tumor. Introduction: Spectroscopic imaging (PCT-S) has the potential to identify a molecular species and quantify its concentration with high spatial fidelity. To accomplish this task, tissue attenuation losses during photon propagation in heterogeneous 3D objects is necessary. An iterative recovery algorithm has been developed to extract 3D heterogeneous parametric maps of absorption coefficients implementing a MC algorithm based on a single source photoacoustic scanner and to determine the influence of the reduced scattering coefficient on the uncertainty of recovered absorption coefficient. Material and Methods: This algorithm is tested for spheres and ellipsoids embedded in simulated mouse torso with optical absorption values ranging from 0.01-0.5/cm, for the same objects where the optical scattering is unknown (μs'=7-13/cm), and for a heterogeneous distribution of absorbers. Results: Systemic and statistical errors in ma with a priori knowledge of μs' and g are <2% (sphere) and <4% (ellipsoid) for all ma and without a priori knowledge of ms' is <3% and <6%. For heterogenenous distributions of ma, errors are <4% and <5.5% for each object with a prior knowledge of ms' and g, and to 7 and 14% when μs' varied from 7-13/cm. Conclusions: A Monte Carlo code has been successfully developed and used to correct for photon propagation effects in simulated objects consistent with tumors.

  1. Development of Mould of Rheology Test Sample via CadMould 3D-F Simulation

    NASA Astrophysics Data System (ADS)

    Othman, M. H.; Yusof, M. A. M.; Hasan, S.; Ibrahim, M. H. I.; Amin, S. Y. M.; Marwah, O. M. F.; Shaari, M. F.; Johar, M. A.; Shahbudin, S. N. A.

    2017-08-01

    This research was about the development of mould for rheology test sample via simulation. The development work concerned with stages of design, simulation, analysis, and fabrication of the mould to produce good quality samples. In the design stage, three mould concepts have been prepared via Solid Works software. The simulation of injection moulding was conducted by using CadMould 3D-F software. Then, in the analysis stage, the main factor that has been studied were the cavity system, runner system and the gating system. For each design, different type of systems were applied to compare different simulation result. Through the simulation software, it was rectified that the parameter such as the number of cavities, filling time, shear stress were the main factors to contribute good rheological properties of the sample. The final result shows that Design 2 was chosen as the suitable mould due to number of cavities and good results in the analysis, as compare to other mould design. Finally, Design 2 have been fabricated and undergo fitting test to see whether the dimension had been done correctly. Based on this research findings, it was proven that to develop a mould suitable for rheology sample, the mould design selection should be made based on the type of system in simulations.

  2. Temporal 3D refined simulation of SF6 release in the ionosphere

    NASA Astrophysics Data System (ADS)

    Xu, Zheng-Wen; Zhao, Hai-Sheng; Wu, Jian; Feng, Jie; Xu, Bin; Zhang, Ya-Bin; Xue, Kun; Ma, Zheng-Zheng

    2017-04-01

    A number of significant studies have been dedicated to SF6 releases. However, given the complicated nature, the simulations provided at the design phases are still not consistent with those diagnosed in experiments. It is mainly because the actual conditions of experiments have not been fully introduced in the state-of-art models. A temporal 3D refined simulation model of SF6 release by a rocket payload is proposed in this paper. It first considers the release status (rocket attitude, velocity, etc.), release process (duration, injection velocity, the flux of the chemical release, etc.) and ambient neutral wind. This model is better than existing ones; the latter can only deal with release from a point source. The time-dependent drift of the released cloud, driven by the velocities of the rocket inertia and neutral wind, are calculated accurately. The non-uniform spherical structure of the electron density hole driven by the lasting release along the trajectory and the injection velocity are also described. The release flow field is calculated by using a new microcell method. The temporal 3D refined model proposed could be useful for improving the diagnosis and also helpful for the theory on chemical releases.

  3. 3D face recognition using simulated annealing and the surface interpenetration measure.

    PubMed

    Queirolo, Chauã C; Silva, Luciano; Bellon, Olga R P; Segundo, Maurício Pamplona

    2010-02-01

    This paper presents a novel automatic framework to perform 3D face recognition. The proposed method uses a Simulated Annealing-based approach (SA) for range image registration with the Surface Interpenetration Measure (SIM), as similarity measure, in order to match two face images. The authentication score is obtained by combining the SIM values corresponding to the matching of four different face regions: circular and elliptical areas around the nose, forehead, and the entire face region. Then, a modified SA approach is proposed taking advantage of invariant face regions to better handle facial expressions. Comprehensive experiments were performed on the FRGC v2 database, the largest available database of 3D face images composed of 4,007 images with different facial expressions. The experiments simulated both verification and identification systems and the results compared to those reported by state-of-the-art works. By using all of the images in the database, a verification rate of 96.5 percent was achieved at a False Acceptance Rate (FAR) of 0.1 percent. In the identification scenario, a rank-one accuracy of 98.4 percent was achieved. To the best of our knowledge, this is the highest rank-one score ever achieved for the FRGC v2 database when compared to results published in the literature.

  4. 3D Global Two-Fluid Simulations of Turbulence in LAPD

    NASA Astrophysics Data System (ADS)

    Fisher, Dustin; Rogers, Barrett; Ricci, Paolo

    2012-10-01

    3D global two-fluid simulations are presented in an ongoing effort to identify and understand the physics of instabilities that arise in the Large Plasma Device (LAPD) at UCLA's Basic Science Facility. The LAPD, with its wide range of tunable parameters and device configurations, is ideally suited for studying space and laboratory plasmas. Moreover, the highly detailed and reproducible measurements of the LAPD lend themselves amicably to comparisons with simulations. Ongoing modeling is done using a modified version of the Global Braginskii Solver (GBS) [1] that models the plasma from source to edge region in a fully 3D two-fluid code. The reduced Braginskii equations are solved on a field-aligned grid using a finite difference method and 4th order Runge-Kutta time stepping and are parallelized on Dartmouth's Discovery cluster. Recent progress has been made to account for the thermionic cathode emission of fast electrons at the source, the axial dependence of the plasma source, and it is now possible to vary the potential on the front and side walls. Preliminary results, seen from the density and temperature profiles, show that the low frequency Kelvin Helmholtz instability still dominates the turbulence in the device.[4pt] [1] B. Rogers and P. Ricci. Phys. Rev. Lett. 104:225002, 2010

  5. Vortices and spirals at gap edges in 3D self-gravitating disk-planet simulations

    NASA Astrophysics Data System (ADS)

    Lin, M.

    2012-12-01

    Numerical simulations of global 3D self-gravitating protoplanetary disks with a gap opened by an embedded planet are presented. The simulations are customised to examine planetary gap stability. Previous results, obtained by Lin & Papaloizou from 2D disk models, are reproduced in 3D. These include (i) the development of vortices associated with local potential vorticity minima at gap edges and their merging on dynamical timescales in weakly self-gravitating disks, (ii) the increased number of vortices as the strength of self-gravity is increased and their resisted merging, and (iii) suppression of the vortex instability and development of global spiral arms associated with local potential vorticity maxima in massive disks. The vertical structure of these disturbances are examined. In terms of the relative density perturbation, the vortex disturbance has weak vertical dependence when self-gravity is neglected. Vortices become more stratified with increasing self-gravity. This effect is seen even when the unperturbed region around the planet's orbital radius has a Toomre stability parameter ~ 10. The spiral modes display significant vertical structure at the gap edge, with the midplane density enhancement being several times larger than that near the upper disk boundary. However, for both instabilities the vertical Mach number is small, and on average vertical motions near the gap edge do not dominate over horizontal motions.

  6. Simulation of metal forming processes with a 3D adaptive remeshing procedure

    NASA Astrophysics Data System (ADS)

    Zeramdini, Bessam; Robert, Camille; Germain, Guenael; Pottier, Thomas

    2016-10-01

    In this paper, a fully adaptive 3D numerical methodology based on a tetrahedral element was proposed in order to improve the finite element simulation of any metal forming process. This automatic methodology was implemented in a computational platform which integrates a finite element solver, 3D mesh generation and a field transfer algorithm. The proposed remeshing method was developed in order to solve problems associated with the severe distortion of elements subject to large deformations, to concentrate the elements where the error is large and to coarsen the mesh where the error is small. This leads to a significant reduction in the computation times while maintaining simulation accuracy. In addition, in order to enhance the contact conditions, this method has been coupled with a specific operator to maintain the initial contact between the workpiece nodes and the rigid tool after each remeshing step. In this paper special attention is paid to the data transfer methods and the necessary adaptive remeshing steps are given. Finally, a numerical example is detailed to demonstrate the efficiency of the approach and to compare the results for the different field transfer strategies.

  7. ALE3D Simulation of Heating and Violence in a Fast Cookoff Experiment with LX-10

    SciTech Connect

    McClelland, M A; Maienschein, J L; Howard, W M; Nichols, A L; deHaven, M R; Strand, O T

    2006-06-26

    We performed a computational and experimental analysis of fast cookoff of LX-10 (94.7% HMX, 5.3% Viton A) confined in a 2 kbar steel tube with reinforced end caps. A Scaled-Thermal-Explosion-eXperiment (STEX) was completed in which three radiant heaters were used to heat the vessel until ignition, resulting in a moderately violent explosion after 20.4 minutes. Thermocouple measurements showed tube temperatures as high as 340 C at ignition and LX-10 surface temperatures as high as 279 C, which is near the melting point of HMX. Three micro-power radar systems were used to measure mean fragment velocities of 840 m/s. Photonics Doppler Velocimeters (PDVs) showed a rapid acceleration of fragments over 80 {micro}s. A one-dimensional ALE3D cookoff model at the vessel midplane was used to simulate the heating, thermal expansion, LX-10 decomposition composition, and closing of the gap between the HE (High Explosive) and vessel wall. Although the ALE3D simulation terminated before ignition, the model provided a good representation of heat transfer through the case and across the dynamic gap to the explosive.

  8. ALE3D Simulation and Measurement of Violence in a Fast Cookoff Experiment with LX-10

    SciTech Connect

    McClelland, M A; Maienschein, J L; Howard, W M; deHaven, M R

    2006-11-22

    We performed a computational and experimental analysis of fast cookoff of LX-10 (94.7% HMX, 5.3% Viton A) confined in a 2 kbar steel tube with reinforced end caps. A Scaled-Thermal-Explosion-eXperiment (STEX) was completed in which three radiant heaters were used to heat the vessel until ignition, resulting in a moderately violent explosion after 20.4 minutes. Thermocouple measurements showed tube temperatures as high as 340 C at ignition and LX-10 surface temperatures as high as 279 C, which is near the melting point of HMX. Three micro-power radar systems were used to measure mean fragment velocities of 840 m/s. Photonics Doppler Velocimeters (PDVs) showed a rapid acceleration of fragments over 80 {micro}s. A one-dimensional ALE3D cookoff model at the vessel midplane was used to simulate the heating, thermal expansion, LX-10 decomposition composition, and closing of the gap between the HE (High Explosive) and vessel wall. Although the ALE3D simulation terminated before ignition, the model provided a good representation of heat transfer through the case and across the dynamic gap to the explosive.

  9. 3-D simulation of urban warming in Tokyo and proposal of air-cooled city project

    SciTech Connect

    Saitoh, T.S.; Yamada, Noboru

    1999-07-01

    Recent computer projection of the urban warming in Tokyo metropolitan area around the year 2030 showed the authors that the urban temperature near Otemachi, heart of Tokyo, will exceed 43{+-}2 degree Celsius (110 degree Fahrenheit) at 6 p.m. in the summer. In the present paper, modeling and 3-D simulation results of urban warming in the Tokyo metropolitan area were presented and discussed. Furthermore, the effect of the reduction of carbon dioxide (CO{sub 2}) emissions was discussed by using a newly developed 3-D simulation code. Finally, the authors proposed a new concept; cool-air ventilated city project, which alleviates the urban warming, air pollution, and urban discomfort. In this project, the urban outdoor and indoor spaces are ventilated by clean cooled-air, which is produced in the rural or mountainous regions located far away from the urban area. Water of a huge reservoir is cooled below 4 degree Celsius in winter by utilizing sky radiation cooling and will be kept until the summer for indoor and outdoor space cooling. In this study, the feasibility of this system was discussed.

  10. Reconstructing 3D CAD models for simulation using imaging-based reverse engineering

    NASA Astrophysics Data System (ADS)

    Voisin, Sophie; Page, David; Koschan, Andreas; Abidi, Mongi

    2006-05-01

    The purpose of this research is to investigate imaging-based methods to reconstruct 3D CAD models of real-world objects. The methodology uses structured lighting technologies such as coded-pattern projection and laser-based triangulation to sample 3D points on the surfaces of objects and then to reconstruct these surfaces from the dense point samples. This reverse engineering (RE) research presents reconstruction results for a military tire that is important to tire-soil simulations. The limitations of this approach are the current level of accuracy that imaging-based systems offer relative to more traditional CMM modeling systems. The benefit however is the potential for denser point samples and increased scanning speeds of objects, and with time, the imaging technologies should continue to improve to compete with CMM accuracy. This approach to RE should lead to high fidelity models of manufactured and prototyped components for comparison to the original CAD models and for simulation analysis. We focus this paper on the data collection and view registration problems within the RE pipeline.

  11. Comparing TID simulations using 3-D ray tracing and mirror reflection

    NASA Astrophysics Data System (ADS)

    Huang, X.; Reinisch, B. W.; Sales, G. S.; Paznukhov, V. V.; Galkin, I. A.

    2016-04-01

    Measuring the time variations of Doppler frequencies and angles of arrival (AoA) of ionospherically reflected HF waves has been proposed as a means of detecting the occurrence of traveling ionospheric disturbances (TIDs). Simulations are made using ray tracing through the International Reference Ionosphere (IRI) electron density model in an effort to reproduce measured signatures. The TID is represented by a wavelike perturbation of the 3-D electron density traveling horizontally in the ionosphere with an amplitude that varies sinusoidally with time. By judiciously selecting the TID parameters the ray tracing simulation reproduces the observed Doppler frequencies and AoAs. Ray tracing in a 3-D realistic ionosphere is, however, excessively time consuming considering the involved homing procedures. It is shown that a carefully selected reflecting corrugated mirror can reproduce the time variations of the AoA and Doppler frequency. The results from the ray tracing through the IRI model ionosphere and the mirror model reflections are compared to assess the applicability of the mirror-reflection model.

  12. Efficient physics-based predictive 3D image modeling and simulation of optical atmospheric refraction phenomena

    NASA Astrophysics Data System (ADS)

    Reinhardt, Colin N.; Hammel, Stephen M.; Tsintikidis, Dimitris

    2016-09-01

    We present some preliminary results and discussion of our ongoing effort to develop a prototype volumetric atmospheric optical refraction simulator which uses 3D nonlinear ray-tracing and state-of-art physics-based rendering techniques. The tool will allow simulation of optical curved-ray propagation through nonlinear refractivity gradient profiles in volumetric atmospheric participating media, and the generation of radiometrically accurate images of the resulting atmospheric refraction phenomena, including inferior and superior mirages, over-the-horizon viewing conditions, looming and sinking, towering and stooping of distant objects. The ability to accurately model and predict atmospheric optical refraction conditions and phenomena is important in both defense and commercial applications. Our nonlinear refractive ray-trace method is currently CPU-parallelized and is well-suited for GPU compute implementation.

  13. A 3-D collision handling algorithm for surgery simulation based on feedback fuzzy logic.

    PubMed

    García-Pérez, Verónica; Muñoz-Moreno, Emma; Aja-Fernández, Santiago; Alberola-López, Carlos

    2009-07-01

    In this paper, we propose a new method for collision handling between 3-D deformable (organs) and rigid (surgical tools) objects valid for nonstructured interaction scenes and, specifically, for laparoscopic surgery simulators. During the simulation step, vertices of the organ detected as collided must be accurately shifted out of the tool to elude a visual interpenetration. The proposed approach obtains the new position of each collided vertex of the organ taking into account both kinematic information of the surgical tool and geometric information of the organ surface that surrounds the vertex under analysis. Three parameters inferred from a fuzzy feedback system weigh the nature of the tool motion with respect to the organ. Experimental results show that the solution proposed in this paper is able to avoid the interpenetration among the multiple colliding points efficiently with physically and spatially coherent results.

  14. 3D simulations and modeling of new low capacitance silicon pixel detectors

    NASA Astrophysics Data System (ADS)

    Xiong, Bo; Li, Yu Yun; Li, Zheng

    2016-09-01

    With signal to noise ratio (S/N) being a key parameter of a high performance detector, reducing the detector noise has been one of the main tasks in detector development. A new low capacitance silicon pixel detector is proposed, which is based on a new electrode geometry with reduced effective electrode area while keeping the sensitive volume unchanged. Detector electrical characteristics including electrostatic potential, electric field, full depletion voltage, and capacitance have been simulated in detail using a 3D TCAD tool. From these simulations and calculations, we confirm that the new detector structure has a much reduced capacitance (by a factor of 3) as compared to the traditional pixel detectors with the same sensitive volume. This reduction in detector capacitance can certainly improve the detector signal to noise ratio. However, the full depletion voltage for the new structure is larger than that of the traditional one due to the small electrode effect.

  15. Design and validation of a multiphase 3D model to simulate tropospheric pollution.

    PubMed

    Carnevale, Claudio; Decanini, Edoardo; Volta, Marialuisa

    2008-02-01

    This work presents the Transport and Chemical Aerosol Model (TCAM) formulation and its validation in the frame of CityDelta-CAFE project. TCAM is a 3D eulerian multiphase model simulating tropospheric secondary pollution at mesoscale. It is included in the GAMES (Gas Aerosol Modelling Evaluation System) modelling system, designed to support the analysis of secondary pollution dynamics and to assess the impact of emission control strategies. The presented validation assessment has been performed in the frame of the CityDelta II project over the Milan domain and concerns both gas and aerosol 1999 simulations. Ozone, nitrogen oxides and aerosol computed and observed patterns have been compared and analysed by means of statistical indicators showing high model performances for both winter and summer pollution regimes.

  16. Use of albedo for neutron reflector regions in reactor core 3-D simulations

    NASA Astrophysics Data System (ADS)

    Mohanakrishnan, P.

    1989-10-01

    In this paper we present two new simplified schemes for the application of the albedo concept of replacing the reflector in 3-D reactor core simulations. Both involve the numerical derivation of albedoes from the fluxes at the core- (blanket-) reflector interface obtained from sample calculations including the reflector. Diffusion theory is used for core calculations in both cases. In the first scheme a new method for "diagonalising" the albedo matrix is demonstrated. This achieves easy applicability of the albedo parameters in core simulations of a fast breeder reactor core, resulting in significant savings in computing efforts. The second scheme, applied to light water reactors, achieves better accuracy in core periphery power predictions with the use of only uniform coarse meshes throughout the core and the numerically derived albedoes.

  17. 3D simulation of the image formation in soft x-ray microscopes.

    PubMed

    Selin, Mårten; Fogelqvist, Emelie; Holmberg, Anders; Guttmann, Peter; Vogt, Ulrich; Hertz, Hans M

    2014-12-15

    In water-window soft x-ray microscopy the studied object is typically larger than the depth of focus and the sample illumination is often partially coherent. This blurs out-of-focus features and may introduce considerable fringing. Understanding the influence of these phenomena on the image formation is therefore important when interpreting experimental data. Here we present a wave-propagation model operating in 3D for simulating the image formation of thick objects in partially coherent soft x-ray microscopes. The model is compared with present simulation methods as well as with experiments. The results show that our model predicts the image formation of transmission soft x-ray microscopes more accurately than previous models.

  18. Nonintrusive 3D reconstruction of human bone models to simulate their bio-mechanical response

    NASA Astrophysics Data System (ADS)

    Alexander, Tsouknidas; Antonis, Lontos; Savvas, Savvakis; Nikolaos, Michailidis

    2012-06-01

    3D finite element models representing functional parts of the human skeletal system, have been repeatedly introduced over the last years, to simulate biomechanical response of anatomical characteristics or investigate surgical treatment. The reconstruction of geometrically accurate FEM models, poses a significant challenge for engineers and physicians, as recent advances in tissue engineering dictate highly customized implants, while facilitating the production of alloplast materials that are employed to restore, replace or supplement the function of human tissue. The premises of every accurate reconstruction method, is to encapture the precise geometrical characteristics of the examined tissue and thus the selection of a sufficient imaging technique is of the up-most importance. This paper reviews existing and potential applications related to the current state-of-the-art of medical imaging and simulation techniques. The procedures are examined by introducing their concepts; strengths and limitations, while the authors also present part of their recent activities in these areas. [Figure not available: see fulltext.

  19. 3D nozzle flow simulations including state-to-state kinetics calculation

    NASA Astrophysics Data System (ADS)

    Cutrone, L.; Tuttafesta, M.; Capitelli, M.; Schettino, A.; Pascazio, G.; Colonna, G.

    2014-12-01

    In supersonic and hypersonic flows, thermal and chemical non-equilibrium is one of the fundamental aspects that must be taken into account for the accurate characterization of the plasma. In this paper, we present an optimized methodology to approach plasma numerical simulation by state-to-state kinetics calculations in a fully 3D Navier-Stokes CFD solver. Numerical simulations of an expanding flow are presented aimed at comparing the behavior of state-to-state chemical kinetics models with respect to the macroscopic thermochemical non-equilibrium models that are usually used in the numerical computation of high temperature hypersonic flows. The comparison is focused both on the differences in the numerical results and on the computational effort associated with each approach.

  20. M3D-K Simulations of Beam-Driven Fishbone Instability in DIIID

    NASA Astrophysics Data System (ADS)

    Fu, Guoyong; Tobias, Benjamin; van Zeeland, Michael

    2013-10-01

    Fishbone instability is often observed between sawtooth crashes in DIII-D with sufficient on-axis neutral beam power. In this work, hybrid simulations with the global kinetic/MHD hybrid code M3D-K have been carried out to investigate the linear stability and nonlinear dynamics of n = 1 mode with effects of energetic beam ions for parameters and profiles of a DIII-D discharge. The results show that the n = 1 internal kink mode is unstable in MHD limit. However, with kinetic effects of beam ions, a fishbone-like mode is found to be unstable with mode frequency about a few kHz, consistent with experimental observation. Nonlinear simulations are being performed to investigate mode saturation, frequency chirping as well as energetic particle transport. Numerical results will be compared with the experimental data from DIII-D.

  1. Daily hydro- and morphodynamic simulations at Duck, NC, USA using Delft3D

    NASA Astrophysics Data System (ADS)

    Penko, Allison; Veeramony, Jay; Palmsten, Margaret; Bak, Spicer; Brodie, Katherine; Hesser, Tyler

    2017-04-01

    Operational forecasting of the coastal nearshore has wide ranging societal and humanitarian benefits, specifically for the prediction of natural hazards due to extreme storm events. However, understanding the model limitations and uncertainty is as equally important as the predictions themselves. By comparing and contrasting the predictions of multiple high-resolution models in a location with near real-time collection of observations, we are able to perform a vigorous analysis of the model results in order to achieve more robust and certain predictions. In collaboration with the U.S. Army Corps of Engineers Field Research Facility (USACE FRF) as part of the Coastal Model Test Bed (CMTB) project, we have set up Delft3D at Duck, NC, USA to run in near-real time, driven by measured wave data at the boundary. The CMTB at the USACE FRF allows for the unique integration of operational wave, circulation, and morphology models with real-time observations. The FRF has an extensive array of in-situ and remotely sensed oceanographic, bathymetric, and meteorological data that is broadcast in near-real time onto a publically accessible server. Wave, current, and bed elevation instruments are permanently installed across the model domain including 2 waverider buoys in 17-m and 26-m water depths at 3.5-km and 17-km offshore, respectively, that record directional wave data every 30-min. Here, we present the workflow and output of the Delft3D hydro- and morphodynamic simulations at Duck, and show the tactical benefits and operational potential of such a system. A nested Delft3D simulation runs a parent grid that extends 12-km in the along-shore and 3.5-km in the cross-shore with 50-m resolution and a maximum depth of approximately 17-m. The bathymetry for the parent grid was obtained from a regional digital elevation model (DEM) generated by the Federal Emergency Management Agency (FEMA). The inner nested grid extends 1.8-km in the along-shore and 1-km in the cross-shore with 5-m

  2. Influences of 3D PET scanner components on increased scatter evaluated by a Monte Carlo simulation

    NASA Astrophysics Data System (ADS)

    Hirano, Yoshiyuki; Koshino, Kazuhiro; Iida, Hidehiro

    2017-05-01

    Monte Carlo simulation is widely applied to evaluate the performance of three-dimensional positron emission tomography (3D-PET). For accurate scatter simulations, all components that generate scatter need to be taken into account. The aim of this work was to identify the components that influence scatter. The simulated geometries of a PET scanner were: a precisely reproduced configuration including all of the components; a configuration with the bed, the tunnel and shields; a configuration with the bed and shields; and the simplest geometry with only the bed. We measured and simulated the scatter fraction using two different set-ups: (1) as prescribed by NEMA-NU 2007 and (2) a similar set-up but with a shorter line source, so that all activity was contained only inside the field-of-view (FOV), in order to reduce influences of components outside the FOV. The scatter fractions for the two experimental set-ups were, respectively, 45% and 38%. Regarding the geometrical configurations, the former two configurations gave simulation results in good agreement with the experimental results, but simulation results of the simplest geometry were significantly different at the edge of the FOV. From the simulation of the precise configuration, the object (scatter phantom) was the source of more than 90% of the scatter. This was also confirmed by visualization of photon trajectories. Then, the bed and the tunnel were mainly the sources of the rest of the scatter. From the simulation results, we concluded that the precise construction was not needed; the shields, the tunnel, the bed and the object were sufficient for accurate scatter simulations.

  3. Simulation of orographic effects with a Quasi-3-D Multiscale Modeling Framework: Basic algorithm and preliminary results

    NASA Astrophysics Data System (ADS)

    Jung, J.

    2016-12-01

    The global atmospheric models based on the Multi-scale Modeling Framework (MMF) are able to explicitly resolve subgrid-scale processes by using embedded 2-D Cloud-Resolving Models (CRMs). Up to now, however, those models do not include the orographic effects on the CRM grid scale. This study shows that the effects of CRM grid-scale orography can be simulated reasonably well by the Quasi-3-D MMF (Q3D MMF), which has been developed as a second-generation MMF. In the Q3D framework, the surface topography can be included in the CRM component by using a block representation of the mountains, so that no smoothing of the topographic height is necessary. To demonstrate the performance of such a model, the orographic effects over a steep mountain are simulated in an idealized experimental setup with each of the Q3D MMF and the full 3-D CRM. The latter is used as a benchmark. Comparison of the results shows that the Q3D MMF is able to reproduce the horizontal distribution of orographic precipitation and the flow changes around mountains as simulated by the 3-D CRM, even though the embedded CRMs of the Q3D MMF recognize only some aspects of the complex 3-D topography. It is also shown that the use of 3-D CRMs in the Q3D framework, rather than 2-D CRMs, has positive impacts on the simulation of wind fields but does not substantially change the simulated precipitation.

  4. Simulation of orographic effects with a Quasi-3-D Multiscale Modeling Framework: Basic algorithm and preliminary results

    SciTech Connect

    Jung, Joon -Hee

    2016-10-11

    Here, the global atmospheric models based on the Multi-scale Modeling Framework (MMF) are able to explicitly resolve subgrid-scale processes by using embedded 2-D Cloud-Resolving Models (CRMs). Up to now, however, those models do not include the orographic effects on the CRM grid scale. This study shows that the effects of CRM grid-scale orography can be simulated reasonably well by the Quasi-3-D MMF (Q3D MMF), which has been developed as a second-generation MMF. In the Q3D framework, the surface topography can be included in the CRM component by using a block representation of the mountains, so that no smoothing of the topographic height is necessary. To demonstrate the performance of such a model, the orographic effects over a steep mountain are simulated in an idealized experimental setup with each of the Q3D MMF and the full 3-D CRM. The latter is used as a benchmark. Comparison of the results shows that the Q3D MMF is able to reproduce the horizontal distribution of orographic precipitation and the flow changes around mountains as simulated by the 3-D CRM, even though the embedded CRMs of the Q3D MMF recognize only some aspects of the complex 3-D topography. It is also shown that the use of 3-D CRMs in the Q3D framework, rather than 2-D CRMs, has positive impacts on the simulation of wind fields but does not substantially change the simulated precipitation.

  5. Simulation of orographic effects with a Quasi-3-D Multiscale Modeling Framework: Basic algorithm and preliminary results

    DOE PAGES

    Jung, Joon -Hee

    2016-10-11

    Here, the global atmospheric models based on the Multi-scale Modeling Framework (MMF) are able to explicitly resolve subgrid-scale processes by using embedded 2-D Cloud-Resolving Models (CRMs). Up to now, however, those models do not include the orographic effects on the CRM grid scale. This study shows that the effects of CRM grid-scale orography can be simulated reasonably well by the Quasi-3-D MMF (Q3D MMF), which has been developed as a second-generation MMF. In the Q3D framework, the surface topography can be included in the CRM component by using a block representation of the mountains, so that no smoothing of themore » topographic height is necessary. To demonstrate the performance of such a model, the orographic effects over a steep mountain are simulated in an idealized experimental setup with each of the Q3D MMF and the full 3-D CRM. The latter is used as a benchmark. Comparison of the results shows that the Q3D MMF is able to reproduce the horizontal distribution of orographic precipitation and the flow changes around mountains as simulated by the 3-D CRM, even though the embedded CRMs of the Q3D MMF recognize only some aspects of the complex 3-D topography. It is also shown that the use of 3-D CRMs in the Q3D framework, rather than 2-D CRMs, has positive impacts on the simulation of wind fields but does not substantially change the simulated precipitation.« less

  6. Synthetic 3D modeling of active regions and simulation of their multi-wavelength emission

    NASA Astrophysics Data System (ADS)

    Nita, Gelu M.; Fleishman, Gregory; Kuznetsov, Alexey A.; Loukitcheva, Maria A.; Viall, Nicholeen M.; Klimchuk, James A.; Gary, Dale E.

    2015-04-01

    To facilitate the study of solar active regions, we have created a synthetic modeling framework that combines 3D magnetic structures obtained from magnetic extrapolations with simplified 1D thermal models of the chromosphere, transition region, and corona. To handle, visualize, and use such synthetic data cubes to compute multi-wavelength emission maps and compare them with observations, we have undertaken a major enhancement of our simulation tools, GX_Simulator (ftp://sohoftp.nascom.nasa.gov/solarsoft/packages/gx_simulator/), developed earlier for modeling emission from flaring loops. The greatly enhanced, object-based architecture, which now runs on Windows, Mac, and UNIX platform, offers important new capabilities that include the ability to either import 3D density and temperature distribution models, or to assign to each individual voxel numerically defined coronal or chromospheric temperature and densities, or coronal Differential Emission Measure distributions. Due to these new capabilities, the GX_Simulator can now apply parametric heating models involving average properties of the magnetic field lines crossing a given voxel volume, as well as compute and investigate the spatial and spectral properties of radio (to be compared with VLA or EOVSA data), (sub-)millimeter (ALMA), EUV (AIA/SDO), and X-ray (RHESSI) emission calculated from the model. The application integrates shared-object libraries containing fast free-free, gyrosynchrotron, and gyroresonance emission codes developed in FORTRAN and C++, and soft and hard X-ray and EUV codes developed in IDL. We use this tool to model and analyze an active region and compare the synthetic emission maps obtained in different wavelengths with observations.This work was partially supported by NSF grants AGS-1250374, AGS-1262772, NASA grant NNX14AC87G, the Marie Curie International Research Staff Exchange Scheme "Radiosun" (PEOPLE-2011-IRSES-295272), RFBR grants 14-02-91157, 15-02-01089, 15-02-03717, 15

  7. A simulation technique for 3D MR-guided acoustic radiation force imaging

    PubMed Central

    Payne, Allison; de Bever, Josh; Farrer, Alexis; Coats, Brittany; Parker, Dennis L.; Christensen, Douglas A.

    2015-01-01

    Purpose: In magnetic resonance-guided focused ultrasound (MRgFUS) therapies, the in situ characterization of the focal spot location and quality is critical. MR acoustic radiation force imaging (MR-ARFI) is a technique that measures the tissue displacement caused by the radiation force exerted by the ultrasound beam. This work presents a new technique to model the displacements caused by the radiation force of an ultrasound beam in a homogeneous tissue model. Methods: When a steady-state point-source force acts internally in an infinite homogeneous medium, the displacement of the material in all directions is given by the Somigliana elastostatic tensor. The radiation force field, which is caused by absorption and reflection of the incident ultrasound intensity pattern, will be spatially distributed, and the tensor formulation takes the form of a convolution of a 3D Green’s function with the force field. The dynamic accumulation of MR phase during the ultrasound pulse can be theoretically accounted for through a time-of-arrival weighting of the Green’s function. This theoretical model was evaluated experimentally in gelatin phantoms of varied stiffness (125-, 175-, and 250-bloom). The acoustic and mechanical properties of the phantoms used as parameters of the model were measured using independent techniques. Displacements at focal depths of 30- and 45-mm in the phantoms were measured by a 3D spin echo MR-ARFI segmented-EPI sequence. Results: The simulated displacements agreed with the MR-ARFI measured displacements for all bloom values and focal depths with a normalized RMS difference of 0.055 (range 0.028–0.12). The displacement magnitude decreased and the displacement pattern broadened with increased bloom value for both focal depths, as predicted by the theory. Conclusions: A new technique that models the displacements caused by the radiation force of an ultrasound beam in a homogeneous tissue model theory has been rigorously validated through comparison

  8. A simulation technique for 3D MR-guided acoustic radiation force imaging

    SciTech Connect

    Payne, Allison; Bever, Josh de; Farrer, Alexis; Coats, Brittany; Parker, Dennis L.; Christensen, Douglas A.

    2015-02-15

    Purpose: In magnetic resonance-guided focused ultrasound (MRgFUS) therapies, the in situ characterization of the focal spot location and quality is critical. MR acoustic radiation force imaging (MR-ARFI) is a technique that measures the tissue displacement caused by the radiation force exerted by the ultrasound beam. This work presents a new technique to model the displacements caused by the radiation force of an ultrasound beam in a homogeneous tissue model. Methods: When a steady-state point-source force acts internally in an infinite homogeneous medium, the displacement of the material in all directions is given by the Somigliana elastostatic tensor. The radiation force field, which is caused by absorption and reflection of the incident ultrasound intensity pattern, will be spatially distributed, and the tensor formulation takes the form of a convolution of a 3D Green’s function with the force field. The dynamic accumulation of MR phase during the ultrasound pulse can be theoretically accounted for through a time-of-arrival weighting of the Green’s function. This theoretical model was evaluated experimentally in gelatin phantoms of varied stiffness (125-, 175-, and 250-bloom). The acoustic and mechanical properties of the phantoms used as parameters of the model were measured using independent techniques. Displacements at focal depths of 30- and 45-mm in the phantoms were measured by a 3D spin echo MR-ARFI segmented-EPI sequence. Results: The simulated displacements agreed with the MR-ARFI measured displacements for all bloom values and focal depths with a normalized RMS difference of 0.055 (range 0.028–0.12). The displacement magnitude decreased and the displacement pattern broadened with increased bloom value for both focal depths, as predicted by the theory. Conclusions: A new technique that models the displacements caused by the radiation force of an ultrasound beam in a homogeneous tissue model theory has been rigorously validated through comparison

  9. BlazeDEM3D-GPU A Large Scale DEM simulation code for GPUs

    NASA Astrophysics Data System (ADS)

    Govender, Nicolin; Wilke, Daniel; Pizette, Patrick; Khinast, Johannes

    2017-06-01

    Accurately predicting the dynamics of particulate materials is of importance to numerous scientific and industrial areas with applications ranging across particle scales from powder flow to ore crushing. Computational discrete element simulations is a viable option to aid in the understanding of particulate dynamics and design of devices such as mixers, silos and ball mills, as laboratory scale tests comes at a significant cost. However, the computational time required to simulate an industrial scale simulation which consists of tens of millions of particles can take months to complete on large CPU clusters, making the Discrete Element Method (DEM) unfeasible for industrial applications. Simulations are therefore typically restricted to tens of thousands of particles with highly detailed particle shapes or a few million of particles with often oversimplified particle shapes. However, a number of applications require accurate representation of the particle shape to capture the macroscopic behaviour of the particulate system. In this paper we give an overview of the recent extensions to the open source GPU based DEM code, BlazeDEM3D-GPU, that can simulate millions of polyhedra and tens of millions of spheres on a desktop computer with a single or multiple GPUs.

  10. 3D Multistage Simulation of Each Component of the GE90 Turbofan Engine

    NASA Technical Reports Server (NTRS)

    Turner, Mark; Topp, Dave; Veres, Joe

    1999-01-01

    A 3D multistage simulation of each component of the GE90 Turbofan engine has been made. This includes 49 blade rows. A coupled simulation of all blade rows will be made very soon. The simulation is running using two levels of parallelism. The first level is on a blade row basis with information shared using files. The second level is using a grid domain decomposition with information shared using MPI. Timings will be shown for running on the SP2, an SGI Origin and a distributed system of HP workstations. On the HP workstations, the CHIMP version of MPI is used, with queuing supplied by LSF (Load Sharing Facility). A script-based control system is used to ensure reliability. An MPEG movie illustrating the flow simulation of the engine has been created using PV3, a parallel visualization library created by Bob Haimes of MIT. PVM is used to create a virtual machine from 10 HP workstations and display on an SGI workstation. A representative component simulation will be compared to rig data to demonstrate its usefulness in turbomachinery design and analysis.

  11. 3D Multistage Simulation of Each Component of the GE90 Turbofan Engine

    NASA Technical Reports Server (NTRS)

    Turner, Mark; Topp, Dave; Veres, Joe

    1999-01-01

    A 3D multistage simulation of each component of the GE90 Turbofan engine has been made. This includes 49 blade rows. A coupled simulation of all blade rows will be made very soon. The simulation is running using two levels of parallelism. The first level is on a blade row basis with information shared using files. The second level is using a grid domain decomposition with information shared using MPI. Timings will be shown for running on the SP2, an SGI Origin and a distributed system of HP workstations. On the HP workstations, the CHIMP version of MPI is used, with queuing supplied by LSF (Load Sharing Facility). A script-based control system is used to ensure reliability. An MPEG movie illustrating the flow simulation of the engine has been created using PV3, a parallel visualization library created by Bob Haimes of MIT. PVM is used to create a virtual machine from 10 HP workstations and display on an SGI workstation. A representative component simulation will be compared to rig data to demonstrate its usefulness in turbomachinery design and analysis.

  12. GADEN: A 3D Gas Dispersion Simulator for Mobile Robot Olfaction in Realistic Environments

    PubMed Central

    Hernandez-Bennetts, Victor; Fan, Han; Lilienthal, Achim; Gonzalez-Jimenez, Javier

    2017-01-01

    This work presents a simulation framework developed under the widely used Robot Operating System (ROS) to enable the validation of robotics systems and gas sensing algorithms under realistic environments. The framework is rooted in the principles of computational fluid dynamics and filament dispersion theory, modeling wind flow and gas dispersion in 3D real-world scenarios (i.e., accounting for walls, furniture, etc.). Moreover, it integrates the simulation of different environmental sensors, such as metal oxide gas sensors, photo ionization detectors, or anemometers. We illustrate the potential and applicability of the proposed tool by presenting a simulation case in a complex and realistic office-like environment where gas leaks of different chemicals occur simultaneously. Furthermore, we accomplish quantitative and qualitative validation by comparing our simulated results against real-world data recorded inside a wind tunnel where methane was released under different wind flow profiles. Based on these results, we conclude that our simulation framework can provide a good approximation to real world measurements when advective airflows are present in the environment. PMID:28644375

  13. 3D PIC-MCC simulations of positive streamers in air gaps

    NASA Astrophysics Data System (ADS)

    Jiang, M.; Li, Y.; Wang, H.; Liu, C.

    2017-10-01

    Simulation of positive streamer evolution is important for understanding the microscopic physical process in discharges. Simulations described in this paper are done using a 3D Particle-In-Cell, Monte-Carlo-Collision code with photoionization. Three phases of a positive streamer evolution, identified as initiation, propagation, and branching are studied during simulations. A homogeneous electric field is applied between parallel-flat electrodes forming a millimeter air gap to make simulations and analysis more simple and general. Free electrons created by the photoionization process determine initiation, propagation, and branching of the streamers. Electron avalanches form a positive streamer tip, when the space charge of ions at the positive tip dominates the local electric field. The propagation of the positive tip toward a cathode is the result of combinations of the positive tip and secondary avalanches ahead of it. A curved feather-like channel is formed without obvious branches when the electric field between electrodes is 50 kV/cm. However, a channel is formed with obvious branches when the electric field increases up to 60 kV/cm. In contrast to the branches around a sharp needle electrode, branches near the flat anode are formed at a certain distance away from it. Simulated parameters of the streamer such as diameter, maximum electric field, propagation velocity, and electron density at the streamer tip are in a good agreement with those published earlier.

  14. Parallel computing simulation of electrical excitation and conduction in the 3D human heart.

    PubMed

    Di Yu; Dongping Du; Hui Yang; Yicheng Tu

    2014-01-01

    A correctly beating heart is important to ensure adequate circulation of blood throughout the body. Normal heart rhythm is produced by the orchestrated conduction of electrical signals throughout the heart. Cardiac electrical activity is the resulted function of a series of complex biochemical-mechanical reactions, which involves transportation and bio-distribution of ionic flows through a variety of biological ion channels. Cardiac arrhythmias are caused by the direct alteration of ion channel activity that results in changes in the AP waveform. In this work, we developed a whole-heart simulation model with the use of massive parallel computing with GPGPU and OpenGL. The simulation algorithm was implemented under several different versions for the purpose of comparisons, including one conventional CPU version and two GPU versions based on Nvidia CUDA platform. OpenGL was utilized for the visualization / interaction platform because it is open source, light weight and universally supported by various operating systems. The experimental results show that the GPU-based simulation outperforms the conventional CPU-based approach and significantly improves the speed of simulation. By adopting modern computer architecture, this present investigation enables real-time simulation and visualization of electrical excitation and conduction in the large and complicated 3D geometry of a real-world human heart.

  15. GADEN: A 3D Gas Dispersion Simulator for Mobile Robot Olfaction in Realistic Environments.

    PubMed

    Monroy, Javier; Hernandez-Bennets, Victor; Fan, Han; Lilienthal, Achim; Gonzalez-Jimenez, Javier

    2017-06-23

    This work presents a simulation framework developed under the widely used Robot Operating System (ROS) to enable the validation of robotics systems and gas sensing algorithms under realistic environments. The framework is rooted in the principles of computational fluid dynamics and filament dispersion theory, modeling wind flow and gas dispersion in 3D real-world scenarios (i.e., accounting for walls, furniture, etc.). Moreover, it integrates the simulation of different environmental sensors, such as metal oxide gas sensors, photo ionization detectors, or anemometers. We illustrate the potential and applicability of the proposed tool by presenting a simulation case in a complex and realistic office-like environment where gas leaks of different chemicals occur simultaneously. Furthermore, we accomplish quantitative and qualitative validation by comparing our simulated results against real-world data recorded inside a wind tunnel where methane was released under different wind flow profiles. Based on these results, we conclude that our simulation framework can provide a good approximation to real world measurements when advective airflows are present in the environment.

  16. The Shock Dynamics of Heterogeneous YSO Jets: 3D Simulations Meet Multi-epoch Observations

    NASA Astrophysics Data System (ADS)

    Hansen, E. C.; Frank, A.; Hartigan, P.; Lebedev, S. V.

    2017-03-01

    High-resolution observations of young stellar object (YSO) jets show them to be composed of many small-scale knots or clumps. In this paper, we report results of 3D numerical simulations designed to study how such clumps interact and create morphologies and kinematic patterns seen in emission line observations. Our simulations focus on clump scale dynamics by imposing velocity differences between spherical, over-dense regions, which then lead to the formation of bow shocks as faster clumps overtake slower material. We show that much of the spatial structure apparent in emission line images of jets arises from the dynamics and interactions of these bow shocks. Our simulations show a variety of time-dependent features, including bright knots associated with Mach stems where the shocks intersect, a “frothy” emission structure that arises from the presence of the Nonlinear Thin Shell Instability along the surfaces of the bow shocks, and the merging and fragmentation of clumps. Our simulations use a new non-equilibrium cooling method to produce synthetic emission maps in Hα and [S ii]. These are directly compared to multi-epoch Hubble Space Telescope observations of Herbig–Haro jets. We find excellent agreement between features seen in the simulations and the observations in terms of both proper motion and morphologies. Thus we conclude that YSO jets may be dominated by heterogeneous structures and that interactions between these structures and the shocks they produce can account for many details of YSO jet evolution.

  17. The simulation of 3D mass models in 2D digital mammography and breast tomosynthesis

    SciTech Connect

    Shaheen, Eman De Keyzer, Frederik; Bosmans, Hilde; Ongeval, Chantal Van; Dance, David R.; Young, Kenneth C.

    2014-08-15

    Purpose: This work proposes a new method of building 3D breast mass models with different morphological shapes and describes the validation of the realism of their appearance after simulation into 2D digital mammograms and breast tomosynthesis images. Methods: Twenty-five contrast enhanced MRI breast lesions were collected and each mass was manually segmented in the three orthogonal views: sagittal, coronal, and transversal. The segmented models were combined, resampled to have isotropic voxel sizes, triangularly meshed, and scaled to different sizes. These masses were referred to as nonspiculated masses and were then used as nuclei onto which spicules were grown with an iterative branching algorithm forming a total of 30 spiculated masses. These 55 mass models were projected into 2D projection images to obtain mammograms after image processing and into tomographic sequences of projection images, which were then reconstructed to form 3D tomosynthesis datasets. The realism of the appearance of these mass models was assessed by five radiologists via receiver operating characteristic (ROC) analysis when compared to 54 real masses. All lesions were also given a breast imaging reporting and data system (BIRADS) score. The data sets of 2D mammography and tomosynthesis were read separately. The Kendall's coefficient of concordance was used for the interrater observer agreement assessment for the BIRADS scores per modality. Further paired analysis, using the Wilcoxon signed rank test, of the BIRADS assessment between 2D and tomosynthesis was separately performed for the real masses and for the simulated masses. Results: The area under the ROC curves, averaged over all observers, was 0.54 (95% confidence interval [0.50, 0.66]) for the 2D study, and 0.67 (95% confidence interval [0.55, 0.79]) for the tomosynthesis study. According to the BIRADS scores, the nonspiculated and the spiculated masses varied in their degrees of malignancy from normal (BIRADS 1) to highly

  18. Transient 3D numerical simulations of column collapse and pyroclastic density current scenarios at Vesuvius

    NASA Astrophysics Data System (ADS)

    Esposti Ongaro, T.; Neri, A.; Menconi, G.; de'Michieli Vitturi, M.; Marianelli, P.; Cavazzoni, C.; Erbacci, G.; Baxter, P. J.

    2008-12-01

    Numerical simulations of column collapse and pyroclastic density current (PDC) scenarios at Vesuvius were carried out using a transient 3D flow model based on multiphase transport laws. The model describes the dynamics of the collapse as well as the effects of the 3D topography of the volcano on PDC propagation. Source conditions refer to a medium-scale sub-Plinian event and consider a pressure-balanced jet. Simulation results provide new insights into the complex dynamics of these phenomena. In particular: 1) column collapse can be characterized by different regimes, from incipient collapse to partial or nearly total collapse, thus confirming the possibility of a transitional field of behaviour of the column characterized by the contemporaneous and/or intermittent occurrence of ash fallout and PDCs; 2) the collapse regime can be characterized by its fraction of eruptive mass reaching the ground and generating PDCs; 3) within the range of the investigated source conditions, the propagation and hazard potential of PDCs appear to be directly correlated with the flow-rate of the mass collapsing to the ground, rather than to the collapse height of the column (this finding is in contrast with predictions based on the energy-line concept, which simply correlates the PDC runout and kinetic energy with the collapse height of the column); 4) first-order values of hazard variables associated with PDCs (i.e., dynamic pressure, temperature, airborne ash concentration) can be derived from simulation results, thereby providing initial estimates for the quantification of damage scenarios; 5) for scenarios assuming a location of the central vent coinciding with that of the present Gran Cono, Mount Somma significantly influences the propagation of PDCs, largely reducing their propagation in the northern sector, and diverting mass toward the west and southeast, accentuating runouts and hazard variables for these sectors; 6) the 2D modelling approximation can force an artificial

  19. The simulation of 3D mass models in 2D digital mammography and breast tomosynthesis.

    PubMed

    Shaheen, Eman; De Keyzer, Frederik; Bosmans, Hilde; Dance, David R; Young, Kenneth C; Van Ongeval, Chantal

    2014-08-01

    This work proposes a new method of building 3D breast mass models with different morphological shapes and describes the validation of the realism of their appearance after simulation into 2D digital mammograms and breast tomosynthesis images. Twenty-five contrast enhanced MRI breast lesions were collected and each mass was manually segmented in the three orthogonal views: sagittal, coronal, and transversal. The segmented models were combined, resampled to have isotropic voxel sizes, triangularly meshed, and scaled to different sizes. These masses were referred to as nonspiculated masses and were then used as nuclei onto which spicules were grown with an iterative branching algorithm forming a total of 30 spiculated masses. These 55 mass models were projected into 2D projection images to obtain mammograms after image processing and into tomographic sequences of projection images, which were then reconstructed to form 3D tomosynthesis datasets. The realism of the appearance of these mass models was assessed by five radiologists via receiver operating characteristic (ROC) analysis when compared to 54 real masses. All lesions were also given a breast imaging reporting and data system (BIRADS) score. The data sets of 2D mammography and tomosynthesis were read separately. The Kendall's coefficient of concordance was used for the interrater observer agreement assessment for the BIRADS scores per modality. Further paired analysis, using the Wilcoxon signed rank test, of the BIRADS assessment between 2D and tomosynthesis was separately performed for the real masses and for the simulated masses. The area under the ROC curves, averaged over all observers, was 0.54 (95% confidence interval [0.50, 0.66]) for the 2D study, and 0.67 (95% confidence interval [0.55, 0.79]) for the tomosynthesis study. According to the BIRADS scores, the nonspiculated and the spiculated masses varied in their degrees of malignancy from normal (BIRADS 1) to highly suggestive for malignancy (BIRADS 5

  20. Augmented reality intravenous injection simulator based 3D medical imaging for veterinary medicine.

    PubMed

    Lee, S; Lee, J; Lee, A; Park, N; Lee, S; Song, S; Seo, A; Lee, H; Kim, J-I; Eom, K

    2013-05-01

    Augmented reality (AR) is a technology which enables users to see the real world, with virtual objects superimposed upon or composited with it. AR simulators have been developed and used in human medicine, but not in veterinary medicine. The aim of this study was to develop an AR intravenous (IV) injection simulator to train veterinary and pre-veterinary students to perform canine venipuncture. Computed tomographic (CT) images of a beagle dog were scanned using a 64-channel multidetector. The CT images were transformed into volumetric data sets using an image segmentation method and were converted into a stereolithography format for creating 3D models. An AR-based interface was developed for an AR simulator for IV injection. Veterinary and pre-veterinary student volunteers were randomly assigned to an AR-trained group or a control group trained using more traditional methods (n = 20/group; n = 8 pre-veterinary students and n = 12 veterinary students in each group) and their proficiency at IV injection technique in live dogs was assessed after training was completed. Students were also asked to complete a questionnaire which was administered after using the simulator. The group that was trained using an AR simulator were more proficient at IV injection technique using real dogs than the control group (P ≤ 0.01). The students agreed that they learned the IV injection technique through the AR simulator. Although the system used in this study needs to be modified before it can be adopted for veterinary educational use, AR simulation has been shown to be a very effective tool for training medical personnel. Using the technology reported here, veterinary AR simulators could be developed for future use in veterinary education.

  1. A faster method for 3D/2D medical image registration--a simulation study.

    PubMed

    Birkfellner, Wolfgang; Wirth, Joachim; Burgstaller, Wolfgang; Baumann, Bernard; Staedele, Harald; Hammer, Beat; Gellrich, Niels Claudius; Jacob, Augustinus Ludwig; Regazzoni, Pietro; Messmer, Peter

    2003-08-21

    3D/2D patient-to-computed-tomography (CT) registration is a method to determine a transformation that maps two coordinate systems by comparing a projection image rendered from CT to a real projection image. Iterative variation of the CT's position between rendering steps finally leads to exact registration. Applications include exact patient positioning in radiation therapy, calibration of surgical robots, and pose estimation in computer-aided surgery. One of the problems associated with 3D/2D registration is the fact that finding a registration includes solving a minimization problem in six degrees of freedom (dof) in motion. This results in considerable time requirements since for each iteration step at least one volume rendering has to be computed. We show that by choosing an appropriate world coordinate system and by applying a 2D/2D registration method in each iteration step, the number of iterations can be grossly reduced from n6 to n5. Here, n is the number of discrete variations around a given coordinate. Depending on the configuration of the optimization algorithm, this reduces the total number of iterations necessary to at least 1/3 of it's original value. The method was implemented and extensively tested on simulated x-ray images of a tibia, a pelvis and a skull base. When using one projective image and a discrete full parameter space search for solving the optimization problem, average accuracy was found to be 1.0 +/- 0.6(degrees) and 4.1 +/- 1.9 (mm) for a registration in six parameters, and 1.0 +/- 0.7(degrees) and 4.2 +/- 1.6 (mm) when using the 5 + 1 dof method described in this paper. Time requirements were reduced by a factor 3.1. We conclude that this hardware-independent optimization of 3D/2D registration is a step towards increasing the acceptance of this promising method for a wide number of clinical applications.

  2. Gravitational wave signals from 3D neutrino hydrodynamics simulations of core-collapse supernovae

    NASA Astrophysics Data System (ADS)

    Andresen, H.; Müller, B.; Müller, E.; Janka, H.-Th.

    2017-06-01

    We present gravitational wave (GW) signal predictions from four 3D multigroup neutrino hydrodynamics simulations of core-collapse supernovae of progenitors with 11.2, 20 and 27 M⊙. GW emission in the pre-explosion phase strongly depends on whether the post-shock flow is dominated by the standing accretion shock instability (SASI) or convection and differs considerably from 2D models. SASI activity produces a strong signal component below 250 Hz through asymmetric mass motions in the gain layer and a non-resonant coupling to the proto-neutron star (PNS). Both convection- and SASI-dominated models show GW emission above 250 Hz, but with considerably lower amplitudes than in 2D. This is due to a different excitation mechanism for high-frequency l = 2 motions in the PNS surface, which are predominantly excited by PNS convection in 3D. Resonant excitation of high-frequency surface g modes in 3D by mass motions in the gain layer is suppressed compared to 2D because of smaller downflow velocities and a lack of high-frequency variability in the downflows. In the exploding 20 M⊙ model, shock revival results in enhanced low-frequency emission due to a change of the preferred scale of the convective eddies in the PNS convection zone. Estimates of the expected excess power in two frequency bands suggest that second-generation detectors will only be able to detect very nearby events, but that third-generation detectors could distinguish SASI- and convection-dominated models at distances of ˜ 10 kpc.

  3. A faster method for 3D/2D medical image registration—a simulation study

    NASA Astrophysics Data System (ADS)

    Birkfellner, Wolfgang; Wirth, Joachim; Burgstaller, Wolfgang; Baumann, Bernard; Staedele, Harald; Hammer, Beat; Claudius Gellrich, Niels; Jacob, Augustinus Ludwig; Regazzoni, Pietro; Messmer, Peter

    2003-08-01

    3D/2D patient-to-computed-tomography (CT) registration is a method to determine a transformation that maps two coordinate systems by comparing a projection image rendered from CT to a real projection image. Iterative variation of the CT's position between rendering steps finally leads to exact registration. Applications include exact patient positioning in radiation therapy, calibration of surgical robots, and pose estimation in computer-aided surgery. One of the problems associated with 3D/2D registration is the fact that finding a registration includes solving a minimization problem in six degrees of freedom (dof) in motion. This results in considerable time requirements since for each iteration step at least one volume rendering has to be computed. We show that by choosing an appropriate world coordinate system and by applying a 2D/2D registration method in each iteration step, the number of iterations can be grossly reduced from n6 to n5. Here, n is the number of discrete variations around a given coordinate. Depending on the configuration of the optimization algorithm, this reduces the total number of iterations necessary to at least 1/3 of it's original value. The method was implemented and extensively tested on simulated x-ray images of a tibia, a pelvis and a skull base. When using one projective image and a discrete full parameter space search for solving the optimization problem, average accuracy was found to be 1.0 +/- 0.6(°) and 4.1 +/- 1.9 (mm) for a registration in six parameters, and 1.0 +/- 0.7(°) and 4.2 +/- 1.6 (mm) when using the 5 + 1 dof method described in this paper. Time requirements were reduced by a factor 3.1. We conclude that this hardware-independent optimization of 3D/2D registration is a step towards increasing the acceptance of this promising method for a wide number of clinical applications.

  4. Velocity and Density Models Incorporating the Cascadia Subduction Zone for 3D Earthquake Ground Motion Simulations

    USGS Publications Warehouse

    Stephenson, William J.

    2007-01-01

    INTRODUCTION In support of earthquake hazards and ground motion studies in the Pacific Northwest, three-dimensional P- and S-wave velocity (3D Vp and Vs) and density (3D rho) models incorporating the Cascadia subduction zone have been developed for the region encompassed from about 40.2?N to 50?N latitude, and from about -122?W to -129?W longitude. The model volume includes elevations from 0 km to 60 km (elevation is opposite of depth in model coordinates). Stephenson and Frankel (2003) presented preliminary ground motion simulations valid up to 0.1 Hz using an earlier version of these models. The version of the model volume described here includes more structural and geophysical detail, particularly in the Puget Lowland as required for scenario earthquake simulations in the development of the Seattle Urban Hazards Maps (Frankel and others, 2007). Olsen and others (in press) used the model volume discussed here to perform a Cascadia simulation up to 0.5 Hz using a Sumatra-Andaman Islands rupture history. As research from the EarthScope Program (http://www.earthscope.org) is published, a wealth of important detail can be added to these model volumes, particularly to depths of the upper-mantle. However, at the time of development for this model version, no EarthScope-specific results were incorporated. This report is intended to be a reference for colleagues and associates who have used or are planning to use this preliminary model in their research. To this end, it is intended that these models will be considered a beginning template for a community velocity model of the Cascadia region as more data and results become available.

  5. The dark side of photovoltaic — 3D simulation of glare assessing risk and discomfort

    SciTech Connect

    Rose, Thomas; Wollert, Alexander

    2015-04-15

    Photovoltaic (PV) systems form an important force in the implementation of renewable energies, but as we all know, the force has always its dark side. Besides efficiency considerations and discussions about architectures of power distribution networks, the increasing numbers of installations of PV systems for implementing renewable energies have secondary effects. PV systems can generate glare due to optical reflections and hence might be a serious concern. On the one hand, glare could affect safety, e.g. regarding traffic. On the other hand, glare is a constant source of discomfort in vicinities of PV systems. Hence, assessment of glare is decisive for the success of renewable energies near municipalities and traffic zones for the success of solar power. Several courts decided on the change of PV systems and even on their de-installation because of glare effects. Thus, location-based assessments are required to limit potential reflections and to avoid risks for public infrastructure or discomfort of residents. The question arises on how to calculate reflections accurately according to the environment's topography. Our approach is founded in a 3D-based simulation methodology to calculate and visualize reflections based on the geometry of the environment of PV systems. This computational model is implemented by an interactive tool for simulation and visualization. Hence, project planners receive flexible assistance for adjusting the parameters of solar panels amid the planning process and in particular before the installation of a PV system. - Highlights: • Solar panels cause glare that impacts neighborhoods and traffic infrastructures. • Glare might cause disability and discomfort. • 3D environment for the calculation of glare • Interactive tool to simulate and visualize reflections • Impact assessment of solar power plant farms.

  6. Large-eddy simulation of 3D turbulent flow past a complete marine hydrokinetic turbine

    NASA Astrophysics Data System (ADS)

    Kang, S.; Sotiropoulos, F.

    2011-12-01

    A high-resolution computational framework was recently developed by Kang et al (Adv. Water Resour., submitted) for simulating three-dimensional (3D), turbulent flow past real-life, complete marine hydrokinetic (MHK) turbine configurations. In this model the complex turbine geometry is resolved by employing the curvilinear immersed boundary (CURVIB) method, which solves the 3D unsteady incompressible Navier-Stokes equations in generalized curvilinear domains with embedded arbitrarily complex, moving and/or stationary immersed boundaries (Ge and Sotiropoulos, 2007). Turbulence is simulated using the large-eddy simulation (LES) approach adapted in the context of the CURVIB method, with a wall model based on solving the simplified boundary layer equations used to reconstruct boundary conditions near all solid surfaces (Kang et al., 2011). The model can resolve the flow patterns generated by the rotor and all stationary components of the turbine as well as the interactions of the flow structures with the channel bed. We apply this model to carry out LES of the flow past the model-size hydrokinetic turbine deployed in the St. Anthony Falls Laboratory main channel. The mean velocities and second-order turbulence statistics measured in the downstream wake using acoustic Doppler velocimetry (ADV) are compared with the LES results. The comparisons show that the computed mean velocities and turbulent stresses are in good agreement with the measurements. The high-resolution LES data are used to explore physically important downstream flow characteristics such as the time-averaged wake structure, recovery of cross-sectionally averaged power potential, near-bed scour potential, etc. This work is supported by Verdant Power.

  7. CONDENSED MATTER: STRUCTURE, THERMAL AND MECHANICAL PROPERTIES: Phase-field simulation of the effect of interaction among ordered domains on interdiffusion in Ni-Al-Cr alloys

    NASA Astrophysics Data System (ADS)

    Zhang, Yu-Xiang; Wang, Jin-Cheng; Yang, Yu-Juan; Yang, Gen-Cang; Zhou, Yao-He

    2009-10-01

    The effect of interaction among γ' ordered domains on the interdiffusion process in γ + γ'/γ and γ + γ'/γ + γ' diffusion couples is investigated by using the phase-field method, in which bulk free energy and mobility are linked with thermodynamic and kinetic databases. Simulated results show that the interaction among γ' ordered domains has great influence on the microstructure, the interdiffusion velocity and the volume fraction of γ' phase on both sides of the diffusion couples.

  8. Phast4Windows: A 3D graphical user interface for the reactive-transport simulator PHAST

    USGS Publications Warehouse

    Charlton, Scott R.; Parkhurst, David L.

    2013-01-01

    Phast4Windows is a Windows® program for developing and running groundwater-flow and reactive-transport models with the PHAST simulator. This graphical user interface allows definition of grid-independent spatial distributions of model properties—the porous media properties, the initial head and chemistry conditions, boundary conditions, and locations of wells, rivers, drains, and accounting zones—and other parameters necessary for a simulation. Spatial data can be defined without reference to a grid by drawing, by point-by-point definitions, or by importing files, including ArcInfo® shape and raster files. All definitions can be inspected, edited, deleted, moved, copied, and switched from hidden to visible through the data tree of the interface. Model features are visualized in the main panel of the interface, so that it is possible to zoom, pan, and rotate features in three dimensions (3D). PHAST simulates single phase, constant density, saturated groundwater flow under confined or unconfined conditions. Reactions among multiple solutes include mineral equilibria, cation exchange, surface complexation, solid solutions, and general kinetic reactions. The interface can be used to develop and run simple or complex models, and is ideal for use in the classroom, for analysis of laboratory column experiments, and for development of field-scale simulations of geochemical processes and contaminant transport.

  9. Application Of Moldex3D For Thin-wall Injection Moulding Simulation

    NASA Astrophysics Data System (ADS)

    Šercer, Mladen; Godec, Damir; Bujanić, Božo

    2007-05-01

    The benefits associated with decreasing wall thicknesses below their current values are still measurable and desired even if the final wall thickness is nowhere near those of the aggressive portable electronics industry. It is important to note that gains in wall section reduction do not always occur without investment, in this case, in tooling and machinery upgrades. Equally important is the fact that productivity and performance benefits of reduced material usage, fast cycle times, and lighter weight can often outweigh most of the added costs. In order to eliminate unnecessary mould trials, minimize product development cycle, reduce overall costs and improve product quality, polymeric engineers use new CAE technology (Computer Aided Engineering). This technology is a simulation tool, which combines proven theories, material properties and process conditions to generate realistic simulations and produce valuable recommendations. Based on these recommendations, an optional combination of product design, material and process conditions can be identified. In this work, Moldex3D software was used for simulation of injection moulding in order to avoid potential moulding problems. The results gained from the simulation were used for the optimization of an existing product design, for mould development and for optimization of processing parameters, e.g. injection pressure, mould cavity temperature, etc.

  10. Aeroacoustic Simulations of a Nose Landing Gear Using FUN3D on Pointwise Unstructured Grids

    NASA Technical Reports Server (NTRS)

    Vatsa, Veer N.; Khorrami, Mehdi R.; Rhoads, John; Lockard, David P.

    2015-01-01

    Numerical simulations have been performed for a partially-dressed, cavity-closed (PDCC) nose landing gear configuration that was tested in the University of Florida's open-jet acoustic facility known as the UFAFF. The unstructured-grid flow solver FUN3D is used to compute the unsteady flow field for this configuration. Mixed-element grids generated using the Pointwise(TradeMark) grid generation software are used for these simulations. Particular care is taken to ensure quality cells and proper resolution in critical areas of interest in an effort to minimize errors introduced by numerical artifacts. A hybrid Reynolds-averaged Navier-Stokes/large eddy simulation (RANS/LES) turbulence model is used for these simulations. Solutions are also presented for a wall function model coupled to the standard turbulence model. Time-averaged and instantaneous solutions obtained on these Pointwise grids are compared with the measured data and previous numerical solutions. The resulting CFD solutions are used as input to a Ffowcs Williams-Hawkings noise propagation code to compute the farfield noise levels in the flyover and sideline directions. The computed noise levels compare well with previous CFD solutions and experimental data.

  11. Global Transport of Aerosol and CO: Initial 3-D Simulations of MAPS, TOMS, and AVHRR

    NASA Technical Reports Server (NTRS)

    Chatfield, Robert B.; Li, Long; Hipskind, Stephen R. (Technical Monitor)

    1997-01-01

    Carbon monoxide concentrations and aerosol properties provide the tracers of global tropospheric perturbation by humankind that are most easily observed from satellite platforms. Aircraft field observations are additionally needed for us to simulate and understand the patterns observed. We report on our accumulating experience in making detailed, situation-specific, 3-D simulations of these tropospheric constituents as observed from the MAPS CO sensor, the Advanced Very High Resolution Radiometer (AVHRR) aerosol scattering data, and the Total Ozone Mapping Spectrometer (TOMS) absorbing-aerosol information. We have found a strong complimentarity of satellite and aircraft data in this effort, and recommend modelers use: (1) satellite data to pose initial questions; (2) aircraft data for modelers' first detailed simulations; and (3) a return to satellite data for global generalization. This work provides one example. Our main tools are the MM5 numerical model for meteorological assimilation and GRACES, our NASA Ames tracer-chemistry model, which incorporates emissions estimates. We report on several six-week simulations of global biomass burning effects as observed in the MAPS October 1994 dataset, and show the usefulness of two aircraft datasets, the TRACE-A (1992) and PEM-Tropics missions of NASA's Global Tropospheric Experiment. Additional information is contained in the original extended abstract.

  12. 3D design and electric simulation of a silicon drift detector using a spiral biasing adapter

    NASA Astrophysics Data System (ADS)

    Li, Yu-yun; Xiong, Bo; Li, Zheng

    2016-09-01

    The detector system of combining a spiral biasing adapter (SBA) with a silicon drift detector (SBA-SDD) is largely different from the traditional silicon drift detector (SDD), including the spiral SDD. It has a spiral biasing adapter of the same design as a traditional spiral SDD and an SDD with concentric rings having the same radius. Compared with the traditional spiral SDD, the SBA-SDD separates the spiral's functions of biasing adapter and the p-n junction definition. In this paper, the SBA-SDD is simulated using a Sentaurus TCAD tool, which is a full 3D device simulation tool. The simulated electric characteristics include electric potential, electric field, electron concentration, and single event effect. Because of the special design of the SBA-SDD, the SBA can generate an optimum drift electric field in the SDD, comparable with the conventional spiral SDD, while the SDD can be designed with concentric rings to reduce surface area. Also the current and heat generated in the SBA are separated from the SDD. To study the single event response, we simulated the induced current caused by incident heavy ions (20 and 50 μm penetration length) with different linear energy transfer (LET). The SBA-SDD can be used just like a conventional SDD, such as X-ray detector for energy spectroscopy and imaging, etc.

  13. Ventriculostomy Simulation Using Patient-Specific Ventricular Anatomy, 3D Printing, and Hydrogel Casting.

    PubMed

    Ryan, Justin R; Chen, Tsinsue; Nakaji, Peter; Frakes, David H; Gonzalez, L Fernando

    2015-11-01

    Educational simulators provide a means for students and experts to learn and refine surgical skills. Educators can leverage the strengths of medical simulators to effectively teach complex and high-risk surgical procedures, such as placement of an external ventricular drain. Our objective was to develop a cost-effective, patient-derived medical simulacrum for cerebral lateral ventriculostomy. A cost-effective, patient-derived medical simulacrum was developed for placement of an external lateral ventriculostomy. Elastomeric and gel casting techniques were used to achieve realistic brain geometry and material properties. 3D printing technology was leveraged to develop accurate cranial properties and dimensions. An economical, gravity-driven pump was developed to provide normal and abnormal ventricular pressures. A small pilot study was performed to gauge simulation efficacy using a technology acceptance model. An accurate geometric representation of the brain was developed with independent lateral cerebral ventricular chambers. A gravity-driven pump pressurized the ventricular cavities to physiologic values. A qualitative study illustrated that the simulation has potential as an educational tool to train medical professionals in the ventriculostomy procedure. The ventricular simulacrum can improve learning in a medical education environment. Rapid prototyping and multi-material casting techniques can produce patient-derived models for cost-effective and realistic surgical training scenarios. Copyright © 2015 Elsevier Inc. All rights reserved.

  14. Finite element simulation of HIP-process to produce 3d near net shape parts

    SciTech Connect

    Zadeh, M.K.

    1996-12-31

    One of the major problems when producing powder metallurgy parts through hot isostatic pressing (HIP) is the non homogeneous shrinkage of HIP-capsule during the process. This leads to time and cost consuming machining of the HIP parts. In order to reduce the machining to a minimum, one can try to simulate the HIP-process by means of numerical methods. Hereby, the part distortion can be predicted, and hence a new HIP-capsule can be designed in such a way to prevent the distortion partly or even completely. In the following, a finite element method is used, on one hand, to simulate part shrinkage during HIP process; on the other hand a method is integrated in this simulation to optimize the HIP-capsule geometry. For the determination of material dependent parameters, a mixture of theoretical and experimental methods is used. Results of simulation are verified for a complex 3d HIP part out of TiAl6V4.

  15. 3D simulation of detector parameters for backside illuminated InSb 2D arrays

    NASA Astrophysics Data System (ADS)

    Fishman, Tal; Nahum, Vered; Saguy, Erez; Calahorra, Zippora; Shtrichman, Itay

    2007-09-01

    Accurate and reliable numerical simulation tools are necessary for the development of advanced semiconductor devices. SCD is using the Silvaco Atlas simulation tool to simultaneously solve the Poisson, Continuity and transport equations for 3D detector structures. In this work we describe a set of systematic experiments performed in order to calibrate the Atlas simulation to SCD's backside illuminated InSb focal plane arrays (FPA) realized with planar technology. From these experiments we extract physical parameters such as diffusion length, surface recombination velocity, and SRH lifetime. The actual and predicted performance (e.g. dark-current and MTF) of present and future detectors is presented. We have studied arrays with pitch in the range of 15 to 30 μm. We find that the MTF width is inversely proportional to the pitch. Thus, the spatial resolution of the detector improves with decreasing pixel size as expected. Using the Atlas simulation we predict the performance of planar InSb arrays with smaller pixel dimensions, e.g., 12 and 10 μm.

  16. 3D NEGF quantum transport simulator for modeling ballistic transport in nano FinFETs

    NASA Astrophysics Data System (ADS)

    Khan, H. R.; Mamaluy, D.; Vasileska, D.

    2008-03-01

    Quantum effects play a dominant role in many of the state-of-the-art small size structures for which the applicability of the standard well-developed engineering tools based on a semi-classical transport description is very limited or even impossible. There are a number of methods developed by solid state theorists over the last several decades to address the issue of quantum transport. Among the most commonly used in nanostructure calculations schemes are the Wigner-function approach, the Pauli master equation, and the non-equilibrium Green's functions (NEGF). The growing popularity of the latest (sometimes referred to as the Keldysh or the Kadanoff-Baym) formalism is conditioned by its sound conceptual basis for the development of the new class of quantum transport simulators. We demonstrate in this work that the key to the successful application of the NEGF formalism to the 3D quantum transport problem in semiconductor nanostructures is the numerical efficiency of the contact block reduction (CBR) method. We also present some very important results from the 3D FinFET analysis, such as the importance of the third gate.

  17. A Completely 3D Model for the Simulation of Mechanized Tunnel Excavation

    NASA Astrophysics Data System (ADS)

    Zhao, Kai; Janutolo, Michele; Barla, Giovanni

    2012-07-01

    For long deep tunnels as currently under construction through the Alps, mechanized excavation using tunnel boring machines (TBMs) contributes significantly to savings in construction time and costs. Questions are, however, posed due to the severe ground conditions which are in cases anticipated or encountered along the main tunnel alignment. A major geological hazard is the squeezing of weak rocks, but also brittle failure can represent a significant problem. For the design of mechanized tunnelling in such conditions, the complex interaction between the rock mass, the tunnel machine, its system components, and the tunnel support need to be analysed in detail and this can be carried out by three-dimensional (3D) models including all these components. However, the state-of-the-art shows that very few fully 3D models for mechanical deep tunnel excavation in rock have been developed so far. A completely three-dimensional simulator of mechanised tunnel excavation is presented in this paper. The TBM of reference is a technologically advanced double shield TBM designed to cope with both conditions. Design analyses with reference to spalling hazard along the Brenner and squeezing along the Lyon-Turin Base Tunnel are discussed.

  18. New Insights on Pulsating White Dwarfs from 3D Radiation-Hydrodynamical Simulations

    NASA Astrophysics Data System (ADS)

    Tremblay, Pier-Emmanuel; Fontaine, Gilles; Ludwig, Hans-Günter

    2015-08-01

    We have recently computed a grid of 3D radiation-hydrodynamical simulations for the atmosphere of 70 pure-hydrogen DA white dwarfs in the range 7.0 < log g < 9.0. This includes the full ZZ Ceti instability strip where DA white dwarfs are pulsating, by far the most common type of degenerate pulsators. We have significantly improved the theoretical framework to study these objects by removing the free parameters of 1D convection, which were previously a major modeling hurdle. We will compare our new models with the observed sample of ZZ Ceti stars and highlight the improved derived properties of these objects. In particular, the new spectroscopically determined 3D atmospheric parameters allow for an improved definition of instability strip edges. We have also made new predictions for the size of convection zones, which significantly impact the position where the pulsations are driven, and the region of the HR diagram where white dwarfs are expected to pulsate. Finally, we will present new results from non-adiabatic pulsation calculations.

  19. Higher Order Finite Element Methods for Compositional Simulation in 3D Multiphase Multicomponent Flow

    NASA Astrophysics Data System (ADS)

    Shahraeeni, E.; Firoozabadi, A.

    2012-12-01

    We present a 3D model for fully compositional multi-phase multi-component flow in porous media with species transfer between the phases. Phase properties are modeled with the Peng-Robinson equation of state. Because phase properties may exhibit strong discontinuities, we approximate the mass transport update by the means of discontinuous Galerkin method. Pressure and velocity fields are continuous across the whole domain of solution, which is guaranteed by using the mixed hybrid finite element method. Complexity of the flow necessitates the use of either very fine mesh or higher-order schemes. The use of higher-order finite element methods significantly reduces n