Science.gov

Sample records for 3d rigid bodies

  1. Rigid Body Motion in Stereo 3D Simulation

    ERIC Educational Resources Information Center

    Zabunov, Svetoslav

    2010-01-01

    This paper addresses the difficulties experienced by first-grade students studying rigid body motion at Sofia University. Most quantities describing the rigid body are in relations that the students find hard to visualize and understand. They also lose the notion of cause-result relations between vector quantities, such as the relation between…

  2. Detection of micromechanical deformation under rigid body displacement using twin-pulsed 3D digital holography

    NASA Astrophysics Data System (ADS)

    Perez-Lopez, Carlos; Hernandez-Montes, Maria del Socorro; Mendoza-Santoyo, Fernando

    2005-02-01

    Twin-pulsed digital holography in its 3D set up is used to recover exclusively the micro-mechanical deformation of an object. The test object is allowed to have rigid body movements such as rotation and translation, with the result that the fringe patterns contain information of the latter and the object deformation, a feature that may significantly modify the interpretation of the results. Experimental results from a flat metal plate subject to micro stress and a displacement in the x-z plane are presented to demonstrate that using this optical method it is possible to recover exclusively the contribution of the micro stress.

  3. Curvilinear Immersed Boundary Method for Simulating Fluid Structure Interaction with Complex 3D Rigid Bodies

    PubMed Central

    Borazjani, Iman; Ge, Liang; Sotiropoulos, Fotis

    2010-01-01

    The sharp-interface CURVIB approach of Ge and Sotiropoulos [L. Ge, F. Sotiropoulos, A Numerical Method for Solving the 3D Unsteady Incompressible Navier-Stokes Equations in Curvilinear Domains with Complex Immersed Boundaries, Journal of Computational Physics 225 (2007) 1782–1809] is extended to simulate fluid structure interaction (FSI) problems involving complex 3D rigid bodies undergoing large structural displacements. The FSI solver adopts the partitioned FSI solution approach and both loose and strong coupling strategies are implemented. The interfaces between immersed bodies and the fluid are discretized with a Lagrangian grid and tracked with an explicit front-tracking approach. An efficient ray-tracing algorithm is developed to quickly identify the relationship between the background grid and the moving bodies. Numerical experiments are carried out for two FSI problems: vortex induced vibration of elastically mounted cylinders and flow through a bileaflet mechanical heart valve at physiologic conditions. For both cases the computed results are in excellent agreement with benchmark simulations and experimental measurements. The numerical experiments suggest that both the properties of the structure (mass, geometry) and the local flow conditions can play an important role in determining the stability of the FSI algorithm. Under certain conditions unconditionally unstable iteration schemes result even when strong coupling FSI is employed. For such cases, however, combining the strong-coupling iteration with under-relaxation in conjunction with the Aitken’s acceleration technique is shown to effectively resolve the stability problems. A theoretical analysis is presented to explain the findings of the numerical experiments. It is shown that the ratio of the added mass to the mass of the structure as well as the sign of the local time rate of change of the force or moment imparted on the structure by the fluid determine the stability and convergence of the

  4. Non-linear dynamic analyses of 3D masonry structures by means of a homogenized rigid body and spring model (HRBSM)

    NASA Astrophysics Data System (ADS)

    Bertolesi, Elisa; Milani, Gabriele; Casolo, Siro

    2016-12-01

    A simple homogenized rigid body and spring model (HRBSM) is presented and applied for the non-linear dynamic analysis of 3D masonry structures. The approach, previously developed by the authors for the modeling of in-plane loaded walls is herein extended to real 3D buildings subjected to in- and out-of-plane deformation modes. The elementary cell is discretized by means of three-noded plane stress elements and non-linear interfaces. At a structural level, the non-linear analyses are performed replacing the homogenized orthotropic continuum with a rigid element and non-linear spring assemblage (RBSM) by means of which both in and out of plane mechanisms are allowed. All the simulations here presented are performed using the commercial software Abaqus. In order to validate the proposed model for the analyses of full scale structures subjected to seismic actions, two different examples are critically discussed, namely a church façade and an in-scale masonry building, both subjected to dynamic excitation. The results obtained are compared with experimental or numerical results available in literature.

  5. A 3D, fully Eulerian, VOF-based solver to study the interaction between two fluids and moving rigid bodies using the fictitious domain method

    NASA Astrophysics Data System (ADS)

    Pathak, Ashish; Raessi, Mehdi

    2016-04-01

    We present a three-dimensional (3D) and fully Eulerian approach to capturing the interaction between two fluids and moving rigid structures by using the fictitious domain and volume-of-fluid (VOF) methods. The solid bodies can have arbitrarily complex geometry and can pierce the fluid-fluid interface, forming contact lines. The three-phase interfaces are resolved and reconstructed by using a VOF-based methodology. Then, a consistent scheme is employed for transporting mass and momentum, allowing for simulations of three-phase flows of large density ratios. The Eulerian approach significantly simplifies numerical resolution of the kinematics of rigid bodies of complex geometry and with six degrees of freedom. The fluid-structure interaction (FSI) is computed using the fictitious domain method. The methodology was developed in a message passing interface (MPI) parallel framework accelerated with graphics processing units (GPUs). The computationally intensive solution of the pressure Poisson equation is ported to GPUs, while the remaining calculations are performed on CPUs. The performance and accuracy of the methodology are assessed using an array of test cases, focusing individually on the flow solver and the FSI in surface-piercing configurations. Finally, an application of the proposed methodology in simulations of the ocean wave energy converters is presented.

  6. Scanning 3D full human bodies using Kinects.

    PubMed

    Tong, Jing; Zhou, Jin; Liu, Ligang; Pan, Zhigeng; Yan, Hao

    2012-04-01

    Depth camera such as Microsoft Kinect, is much cheaper than conventional 3D scanning devices, and thus it can be acquired for everyday users easily. However, the depth data captured by Kinect over a certain distance is of extreme low quality. In this paper, we present a novel scanning system for capturing 3D full human body models by using multiple Kinects. To avoid the interference phenomena, we use two Kinects to capture the upper part and lower part of a human body respectively without overlapping region. A third Kinect is used to capture the middle part of the human body from the opposite direction. We propose a practical approach for registering the various body parts of different views under non-rigid deformation. First, a rough mesh template is constructed and used to deform successive frames pairwisely. Second, global alignment is performed to distribute errors in the deformation space, which can solve the loop closure problem efficiently. Misalignment caused by complex occlusion can also be handled reasonably by our global alignment algorithm. The experimental results have shown the efficiency and applicability of our system. Our system obtains impressive results in a few minutes with low price devices, thus is practically useful for generating personalized avatars for everyday users. Our system has been used for 3D human animation and virtual try on, and can further facilitate a range of home–oriented virtual reality (VR) applications.

  7. Interactive initialization of 2D/3D rigid registration

    SciTech Connect

    Gong, Ren Hui; Güler, Özgür; Kürklüoglu, Mustafa; Lovejoy, John; Yaniv, Ziv

    2013-12-15

    Purpose: Registration is one of the key technical components in an image-guided navigation system. A large number of 2D/3D registration algorithms have been previously proposed, but have not been able to transition into clinical practice. The authors identify the primary reason for the lack of adoption with the prerequisite for a sufficiently accurate initial transformation, mean target registration error of about 10 mm or less. In this paper, the authors present two interactive initialization approaches that provide the desired accuracy for x-ray/MR and x-ray/CT registration in the operating room setting. Methods: The authors have developed two interactive registration methods based on visual alignment of a preoperative image, MR, or CT to intraoperative x-rays. In the first approach, the operator uses a gesture based interface to align a volume rendering of the preoperative image to multiple x-rays. The second approach uses a tracked tool available as part of a navigation system. Preoperatively, a virtual replica of the tool is positioned next to the anatomical structures visible in the volumetric data. Intraoperatively, the physical tool is positioned in a similar manner and subsequently used to align a volume rendering to the x-ray images using an augmented reality (AR) approach. Both methods were assessed using three publicly available reference data sets for 2D/3D registration evaluation. Results: In the authors' experiments, the authors show that for x-ray/MR registration, the gesture based method resulted in a mean target registration error (mTRE) of 9.3 ± 5.0 mm with an average interaction time of 146.3 ± 73.0 s, and the AR-based method had mTREs of 7.2 ± 3.2 mm with interaction times of 44 ± 32 s. For x-ray/CT registration, the gesture based method resulted in a mTRE of 7.4 ± 5.0 mm with an average interaction time of 132.1 ± 66.4 s, and the AR-based method had mTREs of 8.3 ± 5.0 mm with interaction times of 58 ± 52 s. Conclusions: Based on the

  8. Articulated Non-Rigid Point Set Registration for Human Pose Estimation from 3D Sensors

    PubMed Central

    Ge, Song; Fan, Guoliang

    2015-01-01

    We propose a generative framework for 3D human pose estimation that is able to operate on both individual point sets and sequential depth data. We formulate human pose estimation as a point set registration problem, where we propose three new approaches to address several major technical challenges in this research. First, we integrate two registration techniques that have a complementary nature to cope with non-rigid and articulated deformations of the human body under a variety of poses. This unique combination allows us to handle point sets of complex body motion and large pose variation without any initial conditions, as required by most existing approaches. Second, we introduce an efficient pose tracking strategy to deal with sequential depth data, where the major challenge is the incomplete data due to self-occlusions and view changes. We introduce a visible point extraction method to initialize a new template for the current frame from the previous frame, which effectively reduces the ambiguity and uncertainty during registration. Third, to support robust and stable pose tracking, we develop a segment volume validation technique to detect tracking failures and to re-initialize pose registration if needed. The experimental results on both benchmark 3D laser scan and depth datasets demonstrate the effectiveness of the proposed framework when compared with state-of-the-art algorithms. PMID:26131673

  9. Computing 3-D structure of rigid objects using stereo and motion

    NASA Technical Reports Server (NTRS)

    Nguyen, Thinh V.

    1987-01-01

    Work performed as a step toward an intelligent automatic machine vision system for 3-D imaging is discussed. The problem considered is the quantitative 3-D reconstruction of rigid objects. Motion and stereo are the two clues considered in this system. The system basically consists of three processes: the low level process to extract image features, the middle level process to establish the correspondence in the stereo (spatial) and motion (temporal) modalities, and the high level process to compute the 3-D coordinates of the corner points by integrating the spatial and temporal correspondences.

  10. Kinematic problem of rigid body orientation control

    NASA Astrophysics Data System (ADS)

    Plotnikov, P. K.; Sergeev, A. N.; Chelnokov, Iu. N.

    1991-10-01

    The problem of reducing a coordinate system linked with a rigid body to a reference coordinate system rotating with a specified (programmed) angular velocity is analyzed using a kinematic formulation. The mathematic model of motion includes kinematic equations of the angular motion of a rigid body in nonnormalized quaternions; used as the controls are projections of the absolute angular velocity of body rotation to the coordinate axes. Two kinds of correction are proposed which represent quaternion analogs of the positional and integral corrections. Linear error equations for the orientation control system are obtained for the types of correction proposed here.

  11. Langevin thermostat for rigid body dynamics.

    PubMed

    Davidchack, Ruslan L; Handel, Richard; Tretyakov, M V

    2009-06-21

    We present a new method for isothermal rigid body simulations using the quaternion representation and Langevin dynamics. It can be combined with the traditional Langevin or gradient (Brownian) dynamics for the translational degrees of freedom to correctly sample the canonical distribution in a simulation of rigid molecules. We propose simple, quasisymplectic second-order numerical integrators and test their performance on the TIP4P model of water. We also investigate the optimal choice of thermostat parameters.

  12. Quantum mechanics of a generalised rigid body

    NASA Astrophysics Data System (ADS)

    Gripaios, Ben; Sutherland, Dave

    2016-05-01

    We consider the quantum version of Arnold’s generalisation of a rigid body in classical mechanics. Thus, we quantise the motion on an arbitrary Lie group manifold of a particle whose classical trajectories correspond to the geodesics of any one-sided-invariant metric. We show how the derivation of the spectrum of energy eigenstates can be simplified by making use of automorphisms of the Lie algebra and (for groups of type I) by methods of harmonic analysis. We show how the method can be extended to cosets, generalising the linear rigid rotor. As examples, we consider all connected and simply connected Lie groups up to dimension 3. This includes the universal cover of the archetypical rigid body, along with a number of new exactly solvable models. We also discuss a possible application to the topical problem of quantising a perfect fluid.

  13. 3D surface and body documentation in forensic medicine: 3-D/CAD Photogrammetry merged with 3D radiological scanning.

    PubMed

    Thali, Michael J; Braun, Marcel; Wirth, Joachim; Vock, Peter; Dirnhofer, Richard

    2003-11-01

    A main goal of forensic medicine is to document and to translate medical findings to a language and/or visualization that is readable and understandable for judicial persons and for medical laymen. Therefore, in addition to classical methods, scientific cutting-edge technologies can and should be used. Through the use of the Forensic, 3-D/CAD-supported Photogrammetric method the documentation of so-called "morphologic fingerprints" has been realized. Forensic, 3-D/CAD-supported Photogrammetry creates morphologic data models of the injury and of the suspected injury-causing instrument allowing the evaluation of a match between the injury and the instrument. In addition to the photogrammetric body surface registration, the radiological documentation provided by a volume scan (i.e., spiral, multi-detector CT, or MRI) registers the sub-surface injury, which is not visible to Photogrammetry. The new, combined method of merging Photogrammetry and Radiology data sets creates the potential to perform many kinds of reconstructions and postprocessing of (patterned) injuries in the realm of forensic medical case work. Using this merging method of colored photogrammetric surface and gray-scale radiological internal documentation, a great step towards a new kind of reality-based, high-tech wound documentation and visualization in forensic medicine is made. The combination of the methods of 3D/CAD Photogrammetry and Radiology has the advantage of being observer-independent, non-subjective, non-invasive, digitally storable over years or decades and even transferable over the web for second opinion.

  14. Particle Filters and Occlusion Handling for Rigid 2D-3D Pose Tracking

    PubMed Central

    Lee, Jehoon; Sandhu, Romeil; Tannenbaum, Allen

    2013-01-01

    In this paper, we address the problem of 2D-3D pose estimation. Specifically, we propose an approach to jointly track a rigid object in a 2D image sequence and to estimate its pose (position and orientation) in 3D space. We revisit a joint 2D segmentation/3D pose estimation technique, and then extend the framework by incorporating a particle filter to robustly track the object in a challenging environment, and by developing an occlusion detection and handling scheme to continuously track the object in the presence of occlusions. In particular, we focus on partial occlusions that prevent the tracker from extracting an exact region properties of the object, which plays a pivotal role for region-based tracking methods in maintaining the track. To this end, a dynamical choice of how to invoke the objective functional is performed online based on the degree of dependencies between predictions and measurements of the system in accordance with the degree of occlusion and the variation of the object’s pose. This scheme provides the robustness to deal with occlusions of an obstacle with different statistical properties from that of the object of interest. Experimental results demonstrate the practical applicability and robustness of the proposed method in several challenging scenarios. PMID:24058277

  15. Optimizing Simulated Trajectories Of Rigid Bodies

    NASA Technical Reports Server (NTRS)

    Brauer, Garry L.; Olson, David W.; Stevenson, Robert

    1989-01-01

    6D POST is general-purpose, six-degree-of-freedom computer program for optimization of simulated trajectories of rigid bodies. Direct extension of three-degree-of-freedom POST program. 6D POST program models trajectory of powered or unpowered vehicle operating at or near rotating planet. Used to solve variety of performance, guidance, and flight-control problems for atmospheric and orbital vehicles. Written in FORTRAN 77 and FORTRAN V.

  16. Computational issues connected with 3D N-body simulations

    NASA Astrophysics Data System (ADS)

    Pfenniger, D.; Friedli, D.

    1993-03-01

    Computational problems related to modeling gravitational systems, and running and analyzing 3D N-body models are discussed. N-body simulations using Particle-Mesh techniques with polar grids are especially well-suited, and physically justified, when studying quiet evolutionary processes in disk galaxies. This technique allows large N, high central resolution, and is still the fastest one. Regardless of the method chosen to compute gravitation, softening is a compromise between HF amplification and resolution. Softened spherical and ellipsoidal kernels with variable resolution are set up. Detailed characteristics of the 3D polar grid, tests, code performances, and vectorization rates are also given. For integrating motion in rotating coordinates, a stable symplectic extension of the leap-frog algorithm is described. The technique used to search for periodic orbits in arbitrary N-body potentials and to determine their stability is explained.

  17. New 3-D coordination polymers based on semi-rigid V-shape tetracarboxylates

    SciTech Connect

    Huang, Jing-Jing; Xu, Wei; Wang, Yan-Ning; Yu, Jie-Hui; Zhang, Ping; Xu, Ji-Qing

    2015-03-15

    Under the hydrothermal conditions, the reactions of transition-metal salts, tetracarboxylic acids and N,N′-donor ligands yielded three new coordination polymers as [Cu{sub 4}(fph){sub 2}(bpe){sub 3}(H{sub 2}O){sub 2}]·2H{sub 2}O (fph=4,4′-(hexafluoroisopropylidene)diphthalate, bpe=1,2-bis(pyridyl)ethylene) 1, [Co{sub 2}(fph)(bpa){sub 2}(H{sub 2}O){sub 2}]·3H{sub 2}O (bpa=1,2-bis(pyridyl)ethylane) 2, and [Ni(H{sub 2}O)(H{sub 2}oph)(bpa)] (oph=4,4′-oxydiphthalate) 3. X-ray single-crystal diffraction analysis revealed that the title three compounds all possess the three-dimensional (3-D) network structures. For compound 1, the fph molecules first link the Cu{sup 2+} ions into a two-dimensional (2-D) wave-like layer with a (4,4) topology. The bpe molecules act as the second linkers, extending the 2-D layers into a 3-D network. For compound 2, the fph molecules still serve as the first connectors, linking the Co{sup 2+} ions into a one-dimensional (1-D) tube-like chain. Then the bpa molecules propagate the chains into a 3-D (4,4,4)-connected network. In the formation of the 3-D network of compound 3, the oph molecule does not play a role. The bpa molecules as well as the water molecules act as a mixed bridge. Only a kind of 4-connected metal node is observed in compound 3. The magnetic properties of compounds 1–3 were investigated and all exhibit the predominant antiferromegnetic magnetic behaviors. - Graphical abstract: Structures of three semi-rigid V-shape tetracarboxylate-based coordination polymers were reported, and their magnetic properties were investigated. - Highlights: • Structures of three tetracarboxylate-based coordination polymers were reported. • Role of organic bases in metal–tetracarboxylate compounds was discussed. • Characters of V-shape and semi-rigidity for tetracarboxylate play a key role in crystal growth. • Their magnetic properties were investigated.

  18. Pulling rigid bodies through granular material

    NASA Astrophysics Data System (ADS)

    Kubik, Ryan; Dressaire, Emilie

    2016-11-01

    The need for anchoring systems in granular materials such as sand is present in the marine transportation industry, e.g. to layout moorings, keep vessels and docks fixed in bodies of water, build oil rigs, etc. The holding power of an anchor is associated with the force exerted by the granular media. Empirical evidence indicates that the holding power depends on the size and shape of the anchoring structure. In this model study, we use a two-dimensional geometry in which a rigid body is pulled through a granular media at constant velocity to determine the drag and lift forces exerted by a granular medium on a moving object. The method allows measuring the drag force and recording the trajectory of the rigid object through the sand. We systematically vary the size and geometry of the rigid body, the properties of the granular medium and the extraction speed. For different initial positions of a cylindrical object pulled horizontally through the medium, we record large variations in magnitude of the drag and a significant lift force that pulls the object out of the sand.

  19. Non-rigid registration of 3D point clouds under isometric deformation

    NASA Astrophysics Data System (ADS)

    Ge, Xuming

    2016-11-01

    An algorithm for pairwise non-rigid registration of 3D point clouds is presented in the specific context of isometric deformations. The critical step is registration of point clouds at different epochs captured from an isometric deformation surface within overlapping regions. Based on characteristics invariant under isometric deformation, a variant of the four-point congruent sets algorithm is applied to generate correspondences between two deformed point clouds, and subsequently a RANSAC framework is used to complete cluster extraction in preparation for global optimal alignment. Examples are presented and the results compared with existing approaches to demonstrate the two main contributions of the technique: a success rate for generating true correspondences of 90% and a root mean square error after final registration of 2-3 mm.

  20. Bioinspired Tuning of Hydrogel Permeability-Rigidity Dependency for 3D Cell Culture

    NASA Astrophysics Data System (ADS)

    Lee, Min Kyung; Rich, Max H.; Baek, Kwanghyun; Lee, Jonghwi; Kong, Hyunjoon

    2015-03-01

    Hydrogels are being extensively used for three-dimensional immobilization and culture of cells in fundamental biological studies, biochemical processes, and clinical treatments. However, it is still a challenge to support viability and regulate phenotypic activities of cells in a structurally stable gel, because the gel becomes less permeable with increasing rigidity. To resolve this challenge, this study demonstrates a unique method to enhance the permeability of a cell-laden hydrogel while avoiding a significant change in rigidity of the gel. Inspired by the grooved skin textures of marine organisms, a hydrogel is assembled to present computationally optimized micro-sized grooves on the surface. Separately, a gel is engineered to preset aligned microchannels similar to a plant's vascular bundles through a uniaxial freeze-drying process. The resulting gel displays significantly increased water diffusivity with reduced changes of gel stiffness, exclusively when the microgrooves and microchannels are aligned together. No significant enhancement of rehydration is achieved when the microgrooves and microchannels are not aligned. Such material design greatly enhances viability and neural differentiation of stem cells and 3D neural network formation within the gel.

  1. Comparing 3D virtual methods for hemimandibular body reconstruction.

    PubMed

    Benazzi, Stefano; Fiorenza, Luca; Kozakowski, Stephanie; Kullmer, Ottmar

    2011-07-01

    Reconstruction of fractured, distorted, or missing parts in human skeleton presents an equal challenge in the fields of paleoanthropology, bioarcheology, forensics, and medicine. This is particularly important within the disciplines such as orthodontics and surgery, when dealing with mandibular defects due to tumors, developmental abnormalities, or trauma. In such cases, proper restorations of both form (for esthetic purposes) and function (restoration of articulation, occlusion, and mastication) are required. Several digital approaches based on three-dimensional (3D) digital modeling, computer-aided design (CAD)/computer-aided manufacturing techniques, and more recently geometric morphometric methods have been used to solve this problem. Nevertheless, comparisons among their outcomes are rarely provided. In this contribution, three methods for hemimandibular body reconstruction have been tested. Two bone defects were virtually simulated in a 3D digital model of a human hemimandible. Accordingly, 3D digital scaffolds were obtained using the mirror copy of the unaffected hemimandible (Method 1), the thin plate spline (TPS) interpolation (Method 2), and the combination between TPS and CAD techniques (Method 3). The mirror copy of the unaffected hemimandible does not provide a suitable solution for bone restoration. The combination between TPS interpolation and CAD techniques (Method 3) produces an almost perfect-fitting 3D digital model that can be used for biocompatible custom-made scaffolds generated by rapid prototyping technologies.

  2. Determination of Percent Body Fat Using 3D Whole Body Laser Scanning: A Preliminary Investigation

    DTIC Science & Technology

    2006-11-01

    circumferences, 3D whole body laser scans and DEXA scans were performed on fifty-one men and women age 18-62. Mean percent body fat was not statistically...3D whole body laser scan , and DEXA scan to measure individuals during a one hour measurement session. 1 Report Documentation Page Form...underwent a 6 minute whole body DEXA scan using a GE Lunar Prodigy DEXA scanner running software version 7.53. Percent body fat was calculated from the

  3. Understanding rigid body motion in arbitrary dimensions

    NASA Astrophysics Data System (ADS)

    Leyvraz, Francois

    2015-05-01

    Why would anyone wish to generalize the already unappetizing subject of rigid body motion to an arbitrary number of dimensions? At first sight, the subject seems to be both repellent and superfluous. The author will try to argue that an approach involving no specific three-dimensional constructs is actually easier to grasp than the traditional approach and might thus be generally useful to understand rigid body motion both in three dimensions and in the general case. Specific differences between the viewpoint suggested here and the usual one include the following: here angular velocities are systematically treated as antisymmetric matrices, a symmetric tensor I quite different from the moment of inertia tensor plays a central role, whereas the latter is shown to be a far more complex object, namely a tensor of rank four. A straightforward way to define it is given. The Euler equation is derived and the use of Noether’s theorem to obtain conserved quantities is illustrated. Finally the equations of motion for a heavy top as well as for two bodies linked by a spherical joint are derived to display the simplicity and the power of the method.

  4. Total body irradiation with a compensator fabricated using a 3D optical scanner and a 3D printer.

    PubMed

    Park, So-Yeon; Kim, Jung-In; Joo, Yoon Ha; Lee, Jung Chan; Park, Jong Min

    2017-05-07

    We propose bilateral total body irradiation (TBI) utilizing a 3D printer and a 3D optical scanner. We acquired surface information of an anthropomorphic phantom with the 3D scanner and fabricated the 3D compensator with the 3D printer, which could continuously compensate for the lateral missing tissue of an entire body from the beam's eye view. To test the system's performance, we measured doses with optically stimulated luminescent dosimeters (OSLDs) as well as EBT3 films with the anthropomorphic phantom during TBI without a compensator, conventional bilateral TBI, and TBI with the 3D compensator (3D TBI). The 3D TBI showed the most uniform dose delivery to the phantom. From the OSLD measurements of the 3D TBI, the deviations between the measured doses and the prescription dose ranged from  -6.7% to 2.4% inside the phantom and from  -2.3% to 0.6% on the phantom's surface. From the EBT3 film measurements, the prescription dose could be delivered to the entire body of the phantom within  ±10% accuracy, except for the chest region, where tissue heterogeneity is extreme. The 3D TBI doses were much more uniform than those of the other irradiation techniques, especially in the anterior-to-posterior direction. The 3D TBI was advantageous, owing to its uniform dose delivery as well as its efficient treatment procedure.

  5. Extracting Feature Points of the Human Body Using the Model of a 3D Human Body

    NASA Astrophysics Data System (ADS)

    Shin, Jeongeun; Ozawa, Shinji

    The purpose of this research is to recognize 3D shape features of a human body automatically using a 3D laser-scanning machine. In order to recognize the 3D shape features, we selected the 23 feature points of a body and modeled its 3D features. The set of 23 feature points consists of the motion axis of a joint, the main point for the bone structure of a human body. For extracting feature points of object model, we made 2.5D templates neighbor for each feature points were extracted according to the feature points of the standard model of human body. And the feature points were extracted by the template matching. The extracted feature points can be applied as body measurement, the 3D virtual fitting system for apparel etc.

  6. Recovering 3D human body configurations using shape contexts.

    PubMed

    Mori, Greg; Malik, Jitendra

    2006-07-01

    The problem we consider in this paper is to take a single two-dimensional image containing a human figure, locate the joint positions, and use these to estimate the body configuration and pose in three-dimensional space. The basic approach is to store a number of exemplar 2D views of the human body in a variety of different configurations and viewpoints with respect to the camera. On each of these stored views, the locations of the body joints (left elbow, right knee, etc.) are manually marked and labeled for future use. The input image is then matched to each stored view, using the technique of shape context matching in conjunction with a kinematic chain-based deformation model. Assuming that there is a stored view sufficiently similar in configuration and pose, the correspondence process will succeed. The locations of the body joints are then transferred from the exemplar view to the test shape. Given the 2D joint locations, the 3D body configuration and pose are then estimated using an existing algorithm. We can apply this technique to video by treating each frame independently--tracking just becomes repeated recognition. We present results on a variety of data sets.

  7. Fast Collision Detection for Fracturing Rigid Bodies.

    PubMed

    Glondu, Loeiz; Schvartzman, Sara C; Marchal, Maud; Dumont, Georges; Otaduy, Miguel A

    2013-07-03

    In complex scenes with many objects, collision detection plays a key role in the simulation performance. This is particularly true in fracture simulation for two main reasons. One is that fracture fragments tend to exhibit very intensive contact, and the other is that collision detection data structures for new fragments need to be computed on the fly. In this paper, we present novel collision detection algorithms and data structures for real-time simulation of fracturing rigid bodies. We build on a combination of well-known efficient data structures, namely distance fields and sphere trees, making our algorithm easy to integrate on existing simulation engines. We propose novel methods to construct these data structures, such that they can be efficiently updated upon fracture events and integrated in a simple yet effective self-adapting contact selection algorithm. Altogether, we drastically reduce the cost of both collision detection and collision response. We have evaluated our global solution for collision detection on challenging scenarios, achieving high frame rates suited for hard real-time applications such as video games or haptics. Our solution opens promising perspectives for complex fracture simulations involving many dynamically created rigid objects.

  8. Fast collision detection for fracturing rigid bodies.

    PubMed

    Glondu, Loeiz; Schvartzman, Sara C; Marchal, Maud; Dumont, Georges; Otaduy, Miguel A

    2014-01-01

    In complex scenes with many objects, collision detection plays a key role in the simulation performance. This is particularly true in fracture simulation for two main reasons. One is that fracture fragments tend to exhibit very intensive contact, and the other is that collision detection data structures for new fragments need to be computed on the fly. In this paper, we present novel collision detection algorithms and data structures for real-time simulation of fracturing rigid bodies. We build on a combination of well-known efficient data structures, namely, distance fields and sphere trees, making our algorithm easy to integrate on existing simulation engines. We propose novel methods to construct these data structures, such that they can be efficiently updated upon fracture events and integrated in a simple yet effective self-adapting contact selection algorithm. Altogether, we drastically reduce the cost of both collision detection and collision response. We have evaluated our global solution for collision detection on challenging scenarios, achieving high frame rates suited for hard real-time applications such as video games or haptics. Our solution opens promising perspectives for complex fracture simulations involving many dynamically created rigid objects.

  9. 3D body scanning technology for fashion and apparel industry

    NASA Astrophysics Data System (ADS)

    D'Apuzzo, Nicola

    2007-01-01

    This paper presents an overview of 3D body scanning technologies with applications to the fashion and apparel industry. Complete systems for the digitization of the human body exist since more than fifteen years. One of the main users of this technology with application in the textile field was the military industry. In fact, body scanning technology is being successfully employed since many years in military bases for a fast selection of the correct size of uniforms for the entire staff. Complete solutions were especially developed for this field of application. Many different research projects were issued for the exploitation of the same technology in the commercial field. Experiments were performed and start-up projects are to time running in different parts of the world by installing full body scanning systems in various locations such as shopping malls, boutiques or dedicated scanning centers. Everything is actually ready to be exploited and all the required hardware, software and solutions are available: full body scanning systems, software for the automatic and reliable extraction of body measurements, e-kiosk and web solutions for the presentation of garments, high-end and low-end virtual-try-on systems. However, complete solutions in this area have still not yet found the expected commercial success. Today, with the on-going large cost reduction given by the appearance of new competitors, methods for digitization of the human body becomes more interesting for the fashion and apparel industry. Therefore, a large expansion of these technologies is expected in the near future. To date, different methods are used commercially for the measurement of the human body. These can be divided into three major distinguished groups: laser-scanning, projection of light patterns, combination modeling and image processing. The different solutions have strengths and weaknesses that profile their suitability for specific applications. This paper gives an overview of their

  10. Whole-body 3D scanner and scan data report

    NASA Astrophysics Data System (ADS)

    Addleman, Stephen R.

    1997-03-01

    With the first whole-body 3D scanner now available the next adventure confronting the user is what to do with all of the data. While the system was built for anthropologists, it has created interest among users from a wide variety of fields. Users with applications in the fields of anthropology, costume design, garment design, entertainment, VR and gaming have a need for the data in formats unique to their fields. Data from the scanner is being converted to solid models for art and design and NURBS for computer graphics applications. Motion capture has made scan data move and dance. The scanner has created a need for advanced application software just as other scanners have in the past.

  11. 2D→3D polycatenated and 3D→3D interpenetrated metal–organic frameworks constructed from thiophene-2,5-dicarboxylate and rigid bis(imidazole) ligands

    SciTech Connect

    Erer, Hakan; Yeşilel, Okan Zafer; Arıcı, Mürsel; Keskin, Seda; Büyükgüngör, Orhan

    2014-02-15

    Hydrothermal reactions of rigid 1,4-bis(imidazol-1-yl)benzene (dib) and 1,4-bis(imidazol-1-yl)-2,5-dimethylbenzene (dimb) with deprotonated thiophene-2,5-dicarboxylic acid (H{sub 2}tdc) in the presence of Zn(II) and Cd(II) salts in H{sub 2}O produced three new metal–organic frameworks, namely, [Zn(µ-tdc)(H{sub 2}O)(µ-dib)]{sub n} (1), [Cd(µ-tdc)(H{sub 2}O)(µ-dib)]{sub n} (2), and ([Cd{sub 2}(µ{sub 3}-tdc){sub 2}(µ-dimb){sub 2}]·(H{sub 2}O)){sub n}(3). These MOFs were characterized by FT-IR spectroscopy, elemental, thermal (TG, DTA, DTG and DSC), and single-crystal X-ray diffraction analyses. Isomorphous complexes 1 and 2 reveal polycatenated 2D+2D→3D framework based on an undulated (4,4)-sql layer. Complex 3 exhibits a new 4-fold interpenetrating 3D framework with the point symbol of 6{sup 6}. Molecular simulations were used to assess the potentials of the complexes for H{sub 2} storage application. Moreover, these coordination polymers exhibit blue fluorescent emission bands in the solid state at room temperature. - Graphical abstract: In this study, hydrothermal reactions of rigid 1,4-bis(imidazol-1-yl)benzene (dib) and 1,4-bis(imidazol-1-yl)-2,5-dimethylbenzene (dimb) with deprotonated thiophene-2,5-dicarboxylic acid (H{sub 2}tdc) in the presence of Zn(II) and Cd(II) salts in H{sub 2}O produced three new metal–organic frameworks. Isomorphous complexes 1 and 2 reveal polycatenated 2D+2D→3D framework based on an undulated (4,4)-sql layer. Complex 3 exhibits a new 4-fold interpenetrating 3D framework with the point symbol of 6{sup 6}. Molecular simulations were used to assess the potentials of the complexes for H{sub 2} storage application. These coordination polymers exhibit blue fluorescent emission bands in the solid state at room temperature. Display Omitted - Highlights: • Complexes 1 and 2 display polycatenated 2D+2D→3D framework. • Complex 3 exhibits a new 4-fold interpenetrating 3D framework. • Complex 1 adsorbs the highest amount of

  12. Thin structured rigid body for acoustic absorption

    NASA Astrophysics Data System (ADS)

    Starkey, T. A.; Smith, J. D.; Hibbins, A. P.; Sambles, J. R.; Rance, H. J.

    2017-01-01

    We present a thin acoustic metamaterial absorber, comprised of only rigid metal and air, that gives rise to near unity absorption of airborne sound on resonance. This simple, easily fabricated, robust structure comprising a perforated metal plate separated from a rigid wall by a deeply subwavelength channel of air is an ideal candidate for a sound absorbing panel. The strong absorption in the system is attributed to the thermo-viscous losses arising from a sound wave guided between the plate and the wall, defining the subwavelength channel.

  13. Evaluation of low-dose limits in 3D-2D rigid registration for surgical guidance

    NASA Astrophysics Data System (ADS)

    Uneri, A.; Wang, A. S.; Otake, Y.; Kleinszig, G.; Vogt, S.; Khanna, A. J.; Gallia, G. L.; Gokaslan, Z. L.; Siewerdsen, J. H.

    2014-09-01

    An algorithm for intensity-based 3D-2D registration of CT and C-arm fluoroscopy is evaluated for use in surgical guidance, specifically considering the low-dose limits of the fluoroscopic x-ray projections. The registration method is based on a framework using the covariance matrix adaptation evolution strategy (CMA-ES) to identify the 3D patient pose that maximizes the gradient information similarity metric. Registration performance was evaluated in an anthropomorphic head phantom emulating intracranial neurosurgery, using target registration error (TRE) to characterize accuracy and robustness in terms of 95% confidence upper bound in comparison to that of an infrared surgical tracking system. Three clinical scenarios were considered: (1) single-view image + guidance, wherein a single x-ray projection is used for visualization and 3D-2D guidance; (2) dual-view image + guidance, wherein one projection is acquired for visualization, combined with a second (lower-dose) projection acquired at a different C-arm angle for 3D-2D guidance; and (3) dual-view guidance, wherein both projections are acquired at low dose for the purpose of 3D-2D guidance alone (not visualization). In each case, registration accuracy was evaluated as a function of the entrance surface dose associated with the projection view(s). Results indicate that images acquired at a dose as low as 4 μGy (approximately one-tenth the dose of a typical fluoroscopic frame) were sufficient to provide TRE comparable or superior to that of conventional surgical tracking, allowing 3D-2D guidance at a level of dose that is at most 10% greater than conventional fluoroscopy (scenario #2) and potentially reducing the dose to approximately 20% of the level in a conventional fluoroscopically guided procedure (scenario #3).

  14. Evaluation of low-dose limits in 3D-2D rigid registration for surgical guidance.

    PubMed

    Uneri, A; Wang, A S; Otake, Y; Kleinszig, G; Vogt, S; Khanna, A J; Gallia, G L; Gokaslan, Z L; Siewerdsen, J H

    2014-09-21

    An algorithm for intensity-based 3D-2D registration of CT and C-arm fluoroscopy is evaluated for use in surgical guidance, specifically considering the low-dose limits of the fluoroscopic x-ray projections. The registration method is based on a framework using the covariance matrix adaptation evolution strategy (CMA-ES) to identify the 3D patient pose that maximizes the gradient information similarity metric. Registration performance was evaluated in an anthropomorphic head phantom emulating intracranial neurosurgery, using target registration error (TRE) to characterize accuracy and robustness in terms of 95% confidence upper bound in comparison to that of an infrared surgical tracking system. Three clinical scenarios were considered: (1) single-view image+guidance, wherein a single x-ray projection is used for visualization and 3D-2D guidance; (2) dual-view image+guidance, wherein one projection is acquired for visualization, combined with a second (lower-dose) projection acquired at a different C-arm angle for 3D-2D guidance; and (3) dual-view guidance, wherein both projections are acquired at low dose for the purpose of 3D-2D guidance alone (not visualization). In each case, registration accuracy was evaluated as a function of the entrance surface dose associated with the projection view(s). Results indicate that images acquired at a dose as low as 4 μGy (approximately one-tenth the dose of a typical fluoroscopic frame) were sufficient to provide TRE comparable or superior to that of conventional surgical tracking, allowing 3D-2D guidance at a level of dose that is at most 10% greater than conventional fluoroscopy (scenario #2) and potentially reducing the dose to approximately 20% of the level in a conventional fluoroscopically guided procedure (scenario #3).

  15. Stochastic modeling of uncertain mass characteristics in rigid body dynamics

    NASA Astrophysics Data System (ADS)

    Richter, Lanae A.; Mignolet, Marc P.

    2017-03-01

    This paper focuses on the formulation, assessment, and application of a modeling strategy of uncertainty on the mass characteristics of rigid bodies, i.e. mass, position of center of mass, and inertia tensor. These characteristics are regrouped into a 4×4 matrix the elements of which are represented as random variables with joint probability density function derived following the maximum entropy framework. This stochastic model is first shown to satisfy all properties expected of the mass and tensor of inertia of rigid bodies. Its usefulness and computational efficiency are next demonstrated on the behavior of a rigid body in pure rotation exhibiting significant uncertainty in mass distribution.

  16. New 3-D coordination polymers based on semi-rigid V-shape tetracarboxylates

    NASA Astrophysics Data System (ADS)

    Huang, Jing-Jing; Xu, Wei; Wang, Yan-Ning; Yu, Jie-Hui; Zhang, Ping; Xu, Ji-Qing

    2015-03-01

    Under the hydrothermal conditions, the reactions of transition-metal salts, tetracarboxylic acids and N,N‧-donor ligands yielded three new coordination polymers as [Cu4(fph)2(bpe)3(H2O)2]·2H2O (fph=4,4‧-(hexafluoroisopropylidene)diphthalate, bpe=1,2-bis(pyridyl)ethylene) 1, [Co2(fph)(bpa)2(H2O)2]·3H2O (bpa=1,2-bis(pyridyl)ethylane) 2, and [Ni(H2O)(H2oph)(bpa)] (oph=4,4‧-oxydiphthalate) 3. X-ray single-crystal diffraction analysis revealed that the title three compounds all possess the three-dimensional (3-D) network structures. For compound 1, the fph molecules first link the Cu2+ ions into a two-dimensional (2-D) wave-like layer with a (4,4) topology. The bpe molecules act as the second linkers, extending the 2-D layers into a 3-D network. For compound 2, the fph molecules still serve as the first connectors, linking the Co2+ ions into a one-dimensional (1-D) tube-like chain. Then the bpa molecules propagate the chains into a 3-D (4,4,4)-connected network. In the formation of the 3-D network of compound 3, the oph molecule does not play a role. The bpa molecules as well as the water molecules act as a mixed bridge. Only a kind of 4-connected metal node is observed in compound 3. The magnetic properties of compounds 1-3 were investigated and all exhibit the predominant antiferromegnetic magnetic behaviors.

  17. Spatiotemporal non-rigid image registration for 3D ultrasound cardiac motion estimation

    NASA Astrophysics Data System (ADS)

    Loeckx, D.; Ector, J.; Maes, F.; D'hooge, J.; Vandermeulen, D.; Voigt, J.-U.; Heidbüchel, H.; Suetens, P.

    2007-03-01

    We present a new method to evaluate 4D (3D + time) cardiac ultrasound data sets by nonrigid spatio-temporal image registration. First, a frame-to-frame registration is performed that yields a dense deformation field. The deformation field is used to calculate local spatiotemporal properties of the myocardium, such as the velocity, strain and strain rate. The field is also used to propagate particular points and surfaces, representing e.g. the endo-cardial surface over the different frames. As such, the 4D path of these point is obtained, which can be used to calculate the velocity by which the wall moves and the evolution of the local surface area over time. The wall velocity is not angle-dependent as in classical Doppler imaging, since the 4D data allows calculating the true 3D motion. Similarly, all 3D myocardium strain components can be estimated. Combined they result in local surface area or volume changes which van be color-coded as a measure of local contractability. A diagnostic method that strongly benefits from this technique is cardiac motion and deformation analysis, which is an important aid to quantify the mechanical properties of the myocardium.

  18. Modeling the Collision with Friction of Rigid Bodies

    NASA Astrophysics Data System (ADS)

    Zabuga, A. G.

    2016-09-01

    Different models of a perfectly inelastic collision of rigid bodies in plane motion are compared. Formulas for the impact impulses are derived for the Kane-Levinson-Whittaker model based on the kinematic restitution factor, the Routh model based on the kinetic restitution factor, and the Stronge model based on the energy restitution factor. It is shown that these formulas coincide if the collision of rough rigid bodies in plane motion is perfectly inelastic

  19. Registration of 3D point clouds and meshes: a survey from rigid to nonrigid.

    PubMed

    Tam, Gary K L; Cheng, Zhi-Quan; Lai, Yu-Kun; Langbein, Frank C; Liu, Yonghuai; Marshall, David; Martin, Ralph R; Sun, Xian-Fang; Rosin, Paul L

    2013-07-01

    Three-dimensional surface registration transforms multiple three-dimensional data sets into the same coordinate system so as to align overlapping components of these sets. Recent surveys have covered different aspects of either rigid or nonrigid registration, but seldom discuss them as a whole. Our study serves two purposes: 1) To give a comprehensive survey of both types of registration, focusing on three-dimensional point clouds and meshes and 2) to provide a better understanding of registration from the perspective of data fitting. Registration is closely related to data fitting in which it comprises three core interwoven components: model selection, correspondences and constraints, and optimization. Study of these components 1) provides a basis for comparison of the novelties of different techniques, 2) reveals the similarity of rigid and nonrigid registration in terms of problem representations, and 3) shows how overfitting arises in nonrigid registration and the reasons for increasing interest in intrinsic techniques. We further summarize some practical issues of registration which include initializations and evaluations, and discuss some of our own observations, insights and foreseeable research trends.

  20. A vortex code for flow over rigid or flexible bluff bodies*

    NASA Astrophysics Data System (ADS)

    Strickland, James; Porter, Vicki; Homicz, Greg; Gossler, Albert

    2002-10-01

    In this paper we discuss version 1.0 of the computer code (CURL) that we have developed to simulate unsteady, 3D, incompressible flows around rigid and flexible bluff bodies whose geometries are made up from thin membrane or ribbon elements. The motivation for this work comes from Sandia National Laboratories' need to perform complete numerical simulations of parachute deployment, inflation, and steady descent. First-generation serial and parallel versions of the uncoupled fluids code have been developed. In addition, a fluid-structure coupling scheme has been developed. Preliminary results for both a rigid and a flexible cross parachute are presented herein.

  1. Rigid body constrained noisy point pattern matching.

    PubMed

    Morgera, S D; Cheong, P C

    1995-01-01

    Noisy pattern matching problems arise in many areas, e.g., computational vision, robotics, guidance and control, stereophotogrammetry, astronomy, genetics, and high-energy physics. Least-squares pattern matching over the Euclidean space E(n) for unordered sets of cardinalities p and q is commonly formulated as a combinatorial optimization problem having complexity p(p-1)...(p-q+1), q=/rigid motion constraints, which often apply. The method reduces the complexity to l(21).n(4)+l(12).p(3), where l(12) and l(21) are the number of iterations required by steepest-ascent and singular value decomposition (SVD)-based procedures, respectively.

  2. Interaction between a flexible filament and a downstream rigid body

    NASA Astrophysics Data System (ADS)

    Tian, Fang-Bao; Luo, Haoxiang; Zhu, Luoding; Lu, Xi-Yun

    2010-08-01

    A filament flapping in the bow wake of a rigid body is considered in order to study the hydrodynamic interaction between flexible and rigid bodies in tandem arrangement. Both numerical and experimental methods are adopted to analyze the motion of the filament, and the drag force on both bodies is computed. It is shown that the results largely depend on the gap between the two objects and the Reynolds number. The flexible body may have larger vibration amplitude but meanwhile experience a reduced drag force. On the other hand, the trailing rigid body enjoys a drag reduction. The qualitative behavior of the filament is independent of the filament’s length and mass ratio or the shape of the rigid body for the parameter regime considered. The result is in contrast with the interaction between two rigid or two flexible objects in tandem arrangement, and it may provide a physical insight into the understanding of the aquatic animals swimming in the bow wake of ships or staying in the bow wake of stationary structures.

  3. The Double Hierarchy Method. A parallel 3D contact method for the interaction of spherical particles with rigid FE boundaries using the DEM

    NASA Astrophysics Data System (ADS)

    Santasusana, Miquel; Irazábal, Joaquín; Oñate, Eugenio; Carbonell, Josep Maria

    2016-07-01

    In this work, we present a new methodology for the treatment of the contact interaction between rigid boundaries and spherical discrete elements (DE). Rigid body parts are present in most of large-scale simulations. The surfaces of the rigid parts are commonly meshed with a finite element-like (FE) discretization. The contact detection and calculation between those DE and the discretized boundaries is not straightforward and has been addressed by different approaches. The algorithm presented in this paper considers the contact of the DEs with the geometric primitives of a FE mesh, i.e. facet, edge or vertex. To do so, the original hierarchical method presented by Horner et al. (J Eng Mech 127(10):1027-1032, 2001) is extended with a new insight leading to a robust, fast and accurate 3D contact algorithm which is fully parallelizable. The implementation of the method has been developed in order to deal ideally with triangles and quadrilaterals. If the boundaries are discretized with another type of geometries, the method can be easily extended to higher order planar convex polyhedra. A detailed description of the procedure followed to treat a wide range of cases is presented. The description of the developed algorithm and its validation is verified with several practical examples. The parallelization capabilities and the obtained performance are presented with the study of an industrial application example.

  4. Scale Space Graph Representation and Kernel Matching for Non Rigid and Textured 3D Shape Retrieval.

    PubMed

    Garro, Valeria; Giachetti, Andrea

    2016-06-01

    In this paper we introduce a novel framework for 3D object retrieval that relies on tree-based shape representations (TreeSha) derived from the analysis of the scale-space of the Auto Diffusion Function (ADF) and on specialized graph kernels designed for their comparison. By coupling maxima of the Auto Diffusion Function with the related basins of attraction, we can link the information at different scales encoding spatial relationships in a graph description that is isometry invariant and can easily incorporate texture and additional geometrical information as node and edge features. Using custom graph kernels it is then possible to estimate shape dissimilarities adapted to different specific tasks and on different categories of models, making the procedure a powerful and flexible tool for shape recognition and retrieval. Experimental results demonstrate that the method can provide retrieval scores similar or better than state-of-the-art on textured and non textured shape retrieval benchmarks and give interesting insights on effectiveness of different shape descriptors and graph kernels.

  5. Tracking 3-D body motion for docking and robot control

    NASA Technical Reports Server (NTRS)

    Donath, M.; Sorensen, B.; Yang, G. B.; Starr, R.

    1987-01-01

    An advanced method of tracking three-dimensional motion of bodies has been developed. This system has the potential to dynamically characterize machine and other structural motion, even in the presence of structural flexibility, thus facilitating closed loop structural motion control. The system's operation is based on the concept that the intersection of three planes defines a point. Three rotating planes of laser light, fixed and moving photovoltaic diode targets, and a pipe-lined architecture of analog and digital electronics are used to locate multiple targets whose number is only limited by available computer memory. Data collection rates are a function of the laser scan rotation speed and are currently selectable up to 480 Hz. The tested performance on a preliminary prototype designed for 0.1 in accuracy (for tracking human motion) at a 480 Hz data rate includes a worst case resolution of 0.8 mm (0.03 inches), a repeatability of plus or minus 0.635 mm (plus or minus 0.025 inches), and an absolute accuracy of plus or minus 2.0 mm (plus or minus 0.08 inches) within an eight cubic meter volume with all results applicable at the 95 percent level of confidence along each coordinate region. The full six degrees of freedom of a body can be computed by attaching three or more target detectors to the body of interest.

  6. Virtual rigid body: a new optical tracking paradigm in image-guided interventions

    NASA Astrophysics Data System (ADS)

    Cheng, Alexis; Lee, David S.; Deshmukh, Nishikant; Boctor, Emad M.

    2015-03-01

    Tracking technology is often necessary for image-guided surgical interventions. Optical tracking is one the options, but it suffers from line of sight and workspace limitations. Optical tracking is accomplished by attaching a rigid body marker, having a pattern for pose detection, onto a tool or device. A larger rigid body results in more accurate tracking, but at the same time large size limits its usage in a crowded surgical workspace. This work presents a prototype of a novel optical tracking method using a virtual rigid body (VRB). We define the VRB as a 3D rigid body marker in the form of pattern on a surface generated from a light source. Its pose can be recovered by observing the projected pattern with a stereo-camera system. The rigid body's size is no longer physically limited as we can manufacture small size light sources. Conventional optical tracking also requires line of sight to the rigid body. VRB overcomes these limitations by detecting a pattern projected onto the surface. We can project the pattern onto a region of interest, allowing the pattern to always be in the view of the optical tracker. This helps to decrease the occurrence of occlusions. This manuscript describes the method and results compared with conventional optical tracking in an experiment setup using known motions. The experiments are done using an optical tracker and a linear-stage, resulting in targeting errors of 0.38mm+/-0.28mm with our method compared to 0.23mm+/-0.22mm with conventional optical markers. Another experiment that replaced the linear stage with a robot arm resulted in rotational errors of 0.50+/-0.31° and 2.68+/-2.20° and the translation errors of 0.18+/-0.10 mm and 0.03+/-0.02 mm respectively.

  7. 3D prostate MR-TRUS non-rigid registration using dual optimization with volume-preserving constraint

    NASA Astrophysics Data System (ADS)

    Qiu, Wu; Yuan, Jing; Fenster, Aaron

    2016-03-01

    We introduce an efficient and novel convex optimization-based approach to the challenging non-rigid registration of 3D prostate magnetic resonance (MR) and transrectal ultrasound (TRUS) images, which incorporates a new volume preserving constraint to essentially improve the accuracy of targeting suspicious regions during the 3D TRUS guided prostate biopsy. Especially, we propose a fast sequential convex optimization scheme to efficiently minimize the employed highly nonlinear image fidelity function using the robust multi-channel modality independent neighborhood descriptor (MIND) across the two modalities of MR and TRUS. The registration accuracy was evaluated using 10 patient images by calculating the target registration error (TRE) using manually identified corresponding intrinsic fiducials in the whole prostate gland. We also compared the MR and TRUS manually segmented prostate surfaces in the registered images in terms of the Dice similarity coefficient (DSC), mean absolute surface distance (MAD), and maximum absolute surface distance (MAXD). Experimental results showed that the proposed method with the introduced volume-preserving prior significantly improves the registration accuracy comparing to the method without the volume-preserving constraint, by yielding an overall mean TRE of 2:0+/-0:7 mm, and an average DSC of 86:5+/-3:5%, MAD of 1:4+/-0:6 mm and MAXD of 6:5+/-3:5 mm.

  8. Performing Accurate Rigid Kinematics Measurements from 3D in vivo Image Sequences through Median Consensus Simultaneous Registration.

    PubMed

    Cresson, T; Jacq, J; Burdin, V; Roux, Ch

    2005-01-01

    While focusing at accurate 3D joint kinematics, this paper explores the problem of how to perform a robust rigid registration for a sequence of object surfaces observed using standard 3D medical imaging techniques. Each object instance is assumed to give access to a polyhedral encoding of its boundary. We consider the case where object instances are noised with significant truncations and segmentation errors. The proposed method aims to tackle this problem in a global way, fully exploiting the duality between redundancy and complementarity of the available instances set. The algorithm operates through robust and simultaneous registration of all geometrical instances on a virtual instance accounting for their median consensus. When compared with standard robust techniques, trials reveal significant gains, as much in robustness as in accuracy. The considered applications are mainly focused on generating highly accurate kinematics in relation to the bone structures of the most complex joints - the tarsus and the carpus - for which no alternative examination techniques exist, enabling fine morphological analysis as well as access to internal joint motions.

  9. Laser welding on trough panel: 3D body part

    NASA Astrophysics Data System (ADS)

    Shirai, Masato; Hisano, Hirohiko

    2003-03-01

    Laser welding for automotive bodies has been introduced mainly by European car manufacturers since more than 10 years ago. Their purposes of laser welding introduction were mainly vehicle performance improvement and lightweight. And laser welding was applied to limited portion where shapes of panels are simple and easy to fit welded flanges. Toyota also has introduced laser welding onto 3 dimensional parts named trough panel since 1999. Our purpose of the introduction was common use of equipment. Trough panel has a complex shape and different shapes in each car type. In order to realize common use of welding equipment, we introduced parts locating equipment which had unique, small & simple jigs fo each car type and NC (Numerical Controlled) locators and air-cooled small laser head developed by ourselves to the trough welding process. Laser welding replaced spot welding and was applied linearly like stitches. Length of laser welding was determined according to comparison with statistic tensile strength and fatigue strength of spot welding.

  10. Integrability of two interactingN-dimensional rigid bodies

    NASA Astrophysics Data System (ADS)

    Perelomov, A. M.; Ragnisco, O.; Wojciechowski, S.

    1985-12-01

    A new class of integrable Euler equations on the Lie algebra so(2n) describing twon-dimensional interacting rigid bodies is found. A Lax representation of equations of motion which depends on a spectral parameter is given and complete integrability is proved. The double hamiltonian structure and the Lax representation of the general flow is discussed.

  11. Knowledge-In-Action: An Example with Rigid Body Motion

    ERIC Educational Resources Information Center

    Da Costa, Sayonara Salvador Cabral; Moreira, Marco Antonio

    2005-01-01

    This paper reports the analysis of the resolution of a paper-and-pencil problem, by eight undergraduate students majoring in engineering (six) and physics (two) at the Pontifcia Universidade Catlica do Rio Grande do Sul, in Porto Alegre, Brazil. The problem concerns kinetics of a rigid body, and the analysis was done in the light of Johnson-Lairds…

  12. An Experiment on the Inertial Properties of a Rigid Body.

    ERIC Educational Resources Information Center

    Armstrong, H. L.

    1985-01-01

    Presents an experiment which focuses on the inertial properties of a rigid body as expressed in terms of principal axes and moments of inertia. Background information, a description of the apparatus needed, and a discussion of results obtained are included. (JN)

  13. Tensor3D: A computer graphics program to simulate 3D real-time deformation and visualization of geometric bodies

    NASA Astrophysics Data System (ADS)

    Pallozzi Lavorante, Luca; Dirk Ebert, Hans

    2008-07-01

    Tensor3D is a geometric modeling program with the capacity to simulate and visualize in real-time the deformation, specified through a tensor matrix and applied to triangulated models representing geological bodies. 3D visualization allows the study of deformational processes that are traditionally conducted in 2D, such as simple and pure shears. Besides geometric objects that are immediately available in the program window, the program can read other models from disk, thus being able to import objects created with different open-source or proprietary programs. A strain ellipsoid and a bounding box are simultaneously shown and instantly deformed with the main object. The principal axes of strain are visualized as well to provide graphical information about the orientation of the tensor's normal components. The deformed models can also be saved, retrieved later and deformed again, in order to study different steps of progressive strain, or to make this data available to other programs. The shape of stress ellipsoids and the corresponding Mohr circles defined by any stress tensor can also be represented. The application was written using the Visualization ToolKit, a powerful scientific visualization library in the public domain. This development choice, allied to the use of the Tcl/Tk programming language, which is independent on the host computational platform, makes the program a useful tool for the study of geometric deformations directly in three dimensions in teaching as well as research activities.

  14. Non-rigid registration of small animal skeletons from micro-CT using 3D shape context

    NASA Astrophysics Data System (ADS)

    Xiao, Di; Bourgeat, Pierrick; Fripp, Jurgen; Acosta Tamayo, Oscar; Gregoire, Marie Claude; Salvado, Olivier

    2009-02-01

    Small animal registration is an important step for molecular image analysis. Skeleton registration from whole-body or only partial micro Computerized Tomography (CT) image is often performed to match individual rats to atlases and templates, for example to identify organs in positron emission tomography (PET). In this paper, we extend the shape context matching technique for 3D surface registration and apply it for rat hind limb skeleton registration from CT images. Using the proposed method, after standard affine iterative closest point (ICP) registration, correspondences between the 3D points from sour and target objects were robustly found and used to deform the limb skeleton surface with thin-plate-spline (TPS). Experiments are described using phantoms and actual rat hind limb skeletons. On animals, mean square errors were decreased by the proposed registration compared to that of its initial alignment. Visually, skeletons were successfully registered even in cases of very different animal poses.

  15. Parametric Study of the Flutter Stability of a Semi-Rigid 3-D Wing-With-Engine Nacelle Model in Subsonic Flow

    NASA Astrophysics Data System (ADS)

    Försching, H.; Knaack, J. M.

    1993-08-01

    A parametric investigation is performed of the aeroelastic flutter stability behaviour of a semi-rigid 3-D wing-with-engine nacelle model in subsonic flow. The system under investigation is a wind tunnel model that was flutter tested some years ago. It consists of a swept-back half wing with a pylon-mounted engine nacelle, representative of modern large transport aircraft, and is elastically restrained at its wing root, so that it may execute decoupled (rigid body) rolling and pitching oscillations about two orthogonal axes. For this binary aeroelastic system, first the equations of motion and then the aeroelastic stability equations are set up in terms of generalized coordinates. In addition to the basic wind tunnel model configuration, two artificial configurations with other positions of the rotation axes and corresponding mode shapes are investigated. For the computation of the motion-induced generalized airloads, a panel technique is used for both the wing and the engine nacelle that is replaced by an annular wing. Numerical results are presented for several systematic parameter variations and Mach numbers, where special emphasis is placed on the effects of the motion-induced unsteady airloads acting on the engine nacelle, the position of the rotation axes, and the frequency ratio of the two modes in roll and pitch. Moreover, a comparison is made with some wind tunnel test results.

  16. Effects of x-ray and CT image enhancements on the robustness and accuracy of a rigid 3D/2D image registration.

    PubMed

    Kim, Jinkoo; Yin, Fang-Fang; Zhao, Yang; Kim, Jae Ho

    2005-04-01

    A rigid body three-dimensional/two-dimensional (3D/2D) registration method has been implemented using mutual information, gradient ascent, and 3D texturemap-based digitally reconstructed radiographs. Nine combinations of commonly used x-ray and computed tomography (CT) image enhancement methods, including window leveling, histogram equalization, and adaptive histogram equalization, were examined to assess their effects on accuracy and robustness of the registration method. From a set of experiments using an anthropomorphic chest phantom, we were able to draw several conclusions. First, the CT and x-ray preprocessing combination with the widest attraction range was the one that linearly stretched the histograms onto the entire display range on both CT and x-ray images. The average attraction ranges of this combination were 71.3 mm and 61.3 deg in the translation and rotation dimensions, respectively, and the average errors were 0.12 deg and 0.47 mm. Second, the combination of the CT image with tissue and bone information and the x-ray images with adaptive histogram equalization also showed subvoxel accuracy, especially the best in the translation dimensions. However, its attraction ranges were the smallest among the examined combinations (on average 36 mm and 19 deg). Last the bone-only information on the CT image did not show convergency property to the correct registration.

  17. 3D and 4D atlas system of living human body structure.

    PubMed

    Suzuki, N; Takatsu, A; Hattori, A; Ezumi, T; Oda, S; Yanai, T; Tominaga, H

    1998-01-01

    A reference system for accessing anatomical information from a complete 3D structure of the whole body "living human", including 4D cardiac dynamics, was reconstructed with 3D and 4D data sets obtained from normal volunteers. With this system, we were able to produce a human atlas in which sectional images can be accessed from any part of the human body interactively by real-time image generation.

  18. 3D measurement of the human body for apparel mass customization

    NASA Astrophysics Data System (ADS)

    Xu, Bugao; Lin, Sheng; Chen, Tong

    2000-12-01

    An automatic body measurement system is essential for apparel mass customization. This paper introduces the development of a body-scanning system using the multi-line triangulation technique, and methods for body size extraction and body modeling. The scanning system can rapidly acquire the surface data of a body, provide accurate body dimensions, many of which are not measurable with conventional methods, and also construct a body form based on the scanned data as a digital model of the body for 3D garment design and for virtual try-on of a designed garment.

  19. 3-D, bluff body drag estimation using a Green's function/Gram-Charlier series approach.

    SciTech Connect

    Barone, Matthew Franklin; De Chant, Lawrence Justin

    2004-05-01

    In this study, we describe the extension of the 2-d preliminary design bluff body drag estimation tool developed by De Chant to apply for 3-d flows. As with the 2-d method, the 3-d extension uses a combined approximate Green's function/Gram-Charlier series approach to retain the body geometry information. Whereas, the 2-d methodology relied solely upon the use of small disturbance theory for the inviscid flow field associated with the body of interest to estimate the near-field initial conditions, e.g. velocity defect, the 3-d methodology uses both analytical (where available) and numerical inviscid solutions. The defect solution is then used as an initial condition in an approximate 3-d Green's function solution. Finally, the Green's function solution is matched to the 3-d analog of the classical 2-d Gram-Charlier series and then integrated to yield the net form drag on the bluff body. Preliminary results indicate that drag estimates computed are of accuracy equivalent to the 2-d method for flows with large separation, i.e. less than 20% relative error. As was the lower dimensional method, the 3-d concept is intended to be a supplement to turbulent Navier-Stokes and experimental solution for estimating drag coefficients over blunt bodies.

  20. 3-D, bluff body drag estimation using a Green's function/Gram-Charlier series approach.

    SciTech Connect

    Barone, Matthew Franklin; De Chant, Lawrence Justin

    2005-01-01

    In this study, we describe the extension of the 2-d preliminary design bluff body drag estimation tool developed by De Chant1 to apply for 3-d flows. As with the 2-d method, the 3-d extension uses a combined approximate Green's function/Gram-Charlier series approach to retain the body geometry information. Whereas, the 2-d methodology relied solely upon the use of small disturbance theory for the inviscid flow field associated with the body of interest to estimate the near-field initial conditions, e.g. velocity defect, the 3-d methodology uses both analytical (where available) and numerical inviscid solutions. The defect solution is then used as an initial condition in an approximate 3-d Green's function solution. Finally, the Green's function solution is matched to the 3-d analog of the classical 2-d Gram-Charlier series and then integrated to yield the net form drag on the bluff body. Preliminary results indicate that drag estimates computed are of accuracy equivalent to the 2-d method for flows with large separation, i.e. less than 20% relative error. As was the lower dimensional method, the 3-d concept is intended to be a supplement to turbulent Navier-Stokes and experimental solution for estimating drag coefficients over blunt bodies.

  1. A method for measuring the inertia properties of rigid bodies

    NASA Astrophysics Data System (ADS)

    Gobbi, M.; Mastinu, G.; Previati, G.

    2011-01-01

    A method for the measurement of the inertia properties of rigid bodies is presented. Given a rigid body and its mass, the method allows to measure (identify) the centre of gravity location and the inertia tensor during a single test. The proposed technique is based on the analysis of the free motion of a multi-cable pendulum to which the body under consideration is connected. The motion of the pendulum and the forces acting on the system are recorded and the inertia properties are identified by means of a proper mathematical procedure based on a least square estimation. After the body is positioned on the test rig, the full identification procedure takes less than 10 min. The natural frequencies of the pendulum and the accelerations involved are quite low, making this method suitable for many practical applications. In this paper, the proposed method is described and two test rigs are presented: the first is developed for bodies up to 3500 kg and the second for bodies up to 400 kg. A validation of the measurement method is performed with satisfactory results. The test rig holds a third part quality certificate according to an ISO 9001 standard and could be scaled up to measure the inertia properties of huge bodies, such as trucks, airplanes or even ships.

  2. Stability characterizations of fixtured rigid bodies with Coulomb friction

    SciTech Connect

    PANG,J.S.; TRINKLE,JEFFREY C.

    2000-02-15

    This paper formally introduces several stability characterizations of fixtured three-dimensional rigid bodies initially at rest and in unilateral contact with Coulomb friction. These characterizations, weak stability and strong stability, arise naturally from the dynamic model of the system, formulated as a complementarity problem. Using the tools of complementarity theory, these characterizations are studied in detail to understand their properties and to develop techniques to identify the stability classifications of general systems subjected to known external loads.

  3. Direct inversion of rigid-body rotational dynamics

    NASA Technical Reports Server (NTRS)

    Bach, Ralph; Paielli, Russell

    1990-01-01

    The global linearization (inversion) of rigid-body rotational dynamics is reviewed and representations in terms of quaternions and direction cosines are compared. Certain properties common to quaternions and direction cosines that make their use preferable to Euler angles and that simplify the inversion procedure are described. Applications of the inversion procedure for state estimation and attitude control are discussed. To avoid complexities caused by aerodynamics, an example of direct inversion for linear feedback control of spacecraft attitude is given.

  4. Direct inversion of rigid-body rotational dynamics

    NASA Technical Reports Server (NTRS)

    Bach, Ralph; Paielli, Russell

    1990-01-01

    The global linearization (inversion) of rigid-body rotational dynamics is reviewed, and representations in terms of quaternions and direction cosines are compared. Certain properties common to quaternions and direction cosines that make their use preferable to Euler angles and that simplify the inversion procedure are described. Applications of the inversion procedure for state estimation and attitude control are discussed. To avoid complexities caused by aerodynamics, an example of direct inversion for linear feedback control of spacecraft attitude is given.

  5. Quantifying Rigid and Nonrigid Motion of Liver Tumors During Stereotactic Body Radiation Therapy

    SciTech Connect

    Xu, Qianyi; Hanna, George; Grimm, Jimm; Kubicek, Gregory; Pahlajani, Niraj; Asbell, Sucha; Fan, Jiajin; Chen, Yan; LaCouture, Tamara

    2014-09-01

    Purpose: To quantify rigid and nonrigid motion of liver tumors using reconstructed 3-dimensional (3D) fiducials from stereo imaging during CyberKnife-based stereotactic body radiation therapy (SBRT). Methods and Materials: Twenty-three liver patients treated with 3 fractions of SBRT were used in this study. After 2 orthogonal kilovoltage images were taken during treatment, the 3D locations of the fiducials were generated by the CyberKnife system and validated using geometric derivations. A total of 4824 pairs of kilovoltage images from start to end of treatment were analyzed. For rigid motion, the rotational angles and translational shifts were reported by aligning 3D fiducial groups from different image pairs, using least-squares fitting. For nonrigid motion, we quantified interfractional tumor volume variations by using the proportional volume derived from the fiducials, which correlates to the sum of interfiducial distances. The individual fiducial displacements were also reported (1) after rigid corrections and (2) without angle corrections. Results: The proportional volume derived by the fiducials demonstrated a volume-increasing trend in the second (101.9% ± 3.6%) and third (101.0 ± 5.9%) fractions among most patients, possibly due to radiation-induced edema. For all patients, the translational shifts in left-right, anteroposterior, and superoinferior directions were 2.1 ± 2.3 mm, 2.9 ± 2.8 mm, and 6.4 ± 5.5 mm, respectively. The greatest translational shifts occurred in the superoinferior direction, likely due to respiratory motion from the diaphragm. The rotational angles in roll, pitch, and yaw were 1.2° ± 1.8°, 1.8° ± 2.4°, and 1.7° ± 2.1°, respectively. The 3D individual fiducial displacements with rigid corrections were 0.2 ± 0.2 mm and increased to 0.5 ± 0.4 mm without rotational corrections. Conclusions: Accurate 3D locations of internal fiducials can be reconstructed from stereo imaging during treatment. As an

  6. Human body 3D posture estimation using significant points and two cameras.

    PubMed

    Juang, Chia-Feng; Chen, Teng-Chang; Du, Wei-Chin

    2014-01-01

    This paper proposes a three-dimensional (3D) human posture estimation system that locates 3D significant body points based on 2D body contours extracted from two cameras without using any depth sensors. The 3D significant body points that are located by this system include the head, the center of the body, the tips of the feet, the tips of the hands, the elbows, and the knees. First, a linear support vector machine- (SVM-) based segmentation method is proposed to distinguish the human body from the background in red, green, and blue (RGB) color space. The SVM-based segmentation method uses not only normalized color differences but also included angle between pixels in the current frame and the background in order to reduce shadow influence. After segmentation, 2D significant points in each of the two extracted images are located. A significant point volume matching (SPVM) method is then proposed to reconstruct the 3D significant body point locations by using 2D posture estimation results. Experimental results show that the proposed SVM-based segmentation method shows better performance than other gray level- and RGB-based segmentation approaches. This paper also shows the effectiveness of the 3D posture estimation results in different postures.

  7. 3D Visual Data-Driven Spatiotemporal Deformations for Non-Rigid Object Grasping Using Robot Hands.

    PubMed

    Mateo, Carlos M; Gil, Pablo; Torres, Fernando

    2016-05-05

    Sensing techniques are important for solving problems of uncertainty inherent to intelligent grasping tasks. The main goal here is to present a visual sensing system based on range imaging technology for robot manipulation of non-rigid objects. Our proposal provides a suitable visual perception system of complex grasping tasks to support a robot controller when other sensor systems, such as tactile and force, are not able to obtain useful data relevant to the grasping manipulation task. In particular, a new visual approach based on RGBD data was implemented to help a robot controller carry out intelligent manipulation tasks with flexible objects. The proposed method supervises the interaction between the grasped object and the robot hand in order to avoid poor contact between the fingertips and an object when there is neither force nor pressure data. This new approach is also used to measure changes to the shape of an object's surfaces and so allows us to find deformations caused by inappropriate pressure being applied by the hand's fingers. Test was carried out for grasping tasks involving several flexible household objects with a multi-fingered robot hand working in real time. Our approach generates pulses from the deformation detection method and sends an event message to the robot controller when surface deformation is detected. In comparison with other methods, the obtained results reveal that our visual pipeline does not use deformations models of objects and materials, as well as the approach works well both planar and 3D household objects in real time. In addition, our method does not depend on the pose of the robot hand because the location of the reference system is computed from a recognition process of a pattern located place at the robot forearm. The presented experiments demonstrate that the proposed method accomplishes a good monitoring of grasping task with several objects and different grasping configurations in indoor environments.

  8. 3D Visual Data-Driven Spatiotemporal Deformations for Non-Rigid Object Grasping Using Robot Hands

    PubMed Central

    Mateo, Carlos M.; Gil, Pablo; Torres, Fernando

    2016-01-01

    Sensing techniques are important for solving problems of uncertainty inherent to intelligent grasping tasks. The main goal here is to present a visual sensing system based on range imaging technology for robot manipulation of non-rigid objects. Our proposal provides a suitable visual perception system of complex grasping tasks to support a robot controller when other sensor systems, such as tactile and force, are not able to obtain useful data relevant to the grasping manipulation task. In particular, a new visual approach based on RGBD data was implemented to help a robot controller carry out intelligent manipulation tasks with flexible objects. The proposed method supervises the interaction between the grasped object and the robot hand in order to avoid poor contact between the fingertips and an object when there is neither force nor pressure data. This new approach is also used to measure changes to the shape of an object’s surfaces and so allows us to find deformations caused by inappropriate pressure being applied by the hand’s fingers. Test was carried out for grasping tasks involving several flexible household objects with a multi-fingered robot hand working in real time. Our approach generates pulses from the deformation detection method and sends an event message to the robot controller when surface deformation is detected. In comparison with other methods, the obtained results reveal that our visual pipeline does not use deformations models of objects and materials, as well as the approach works well both planar and 3D household objects in real time. In addition, our method does not depend on the pose of the robot hand because the location of the reference system is computed from a recognition process of a pattern located place at the robot forearm. The presented experiments demonstrate that the proposed method accomplishes a good monitoring of grasping task with several objects and different grasping configurations in indoor environments. PMID

  9. Dynamic simulation of articulated rigid bodies with contact and collision.

    PubMed

    Weinstein, Rachel; Teran, Joseph; Fedkiw, Ron

    2006-01-01

    We propose a novel approach for dynamically simulating articulated rigid bodies undergoing frequent and unpredictable contact and collision. In order to leverage existing algorithms for nonconvex bodies, multiple collisions, large contact groups, stacking, etc., we use maximal rather than generalized coordinates and take an impulse-based approach that allows us to treat articulation, contact, and collision in a unified manner. Traditional constraint handling methods are subject to drift, and we propose a novel prestabilization method that does not require tunable potentially stiff parameters as does Baumgarte stabilization. This differs from poststabilization in that we compute allowable trajectories before moving the rigid bodies to their new positions, instead of correcting them after the fact when it can be difficult to incorporate the effects of contact and collision. A poststabilization technique is used for momentum and angular momentum. Our approach works with any black box method for specifying valid joint constraints and no special considerations are required for arbitrary closed loops or branching. Moreover, our implementation is linear both in the number of bodies and in the number of auxiliary contact and collision constraints, unlike many other methods that are linear in the number of bodies, but not in the number of auxiliary constraints.

  10. New Langevin and gradient thermostats for rigid body dynamics.

    PubMed

    Davidchack, R L; Ouldridge, T E; Tretyakov, M V

    2015-04-14

    We introduce two new thermostats, one of Langevin type and one of gradient (Brownian) type, for rigid body dynamics. We formulate rotation using the quaternion representation of angular coordinates; both thermostats preserve the unit length of quaternions. The Langevin thermostat also ensures that the conjugate angular momenta stay within the tangent space of the quaternion coordinates, as required by the Hamiltonian dynamics of rigid bodies. We have constructed three geometric numerical integrators for the Langevin thermostat and one for the gradient thermostat. The numerical integrators reflect key properties of the thermostats themselves. Namely, they all preserve the unit length of quaternions, automatically, without the need of a projection onto the unit sphere. The Langevin integrators also ensure that the angular momenta remain within the tangent space of the quaternion coordinates. The Langevin integrators are quasi-symplectic and of weak order two. The numerical method for the gradient thermostat is of weak order one. Its construction exploits ideas of Lie-group type integrators for differential equations on manifolds. We numerically compare the discretization errors of the Langevin integrators, as well as the efficiency of the gradient integrator compared to the Langevin ones when used in the simulation of rigid TIP4P water model with smoothly truncated electrostatic interactions. We observe that the gradient integrator is computationally less efficient than the Langevin integrators. We also compare the relative accuracy of the Langevin integrators in evaluating various static quantities and give recommendations as to the choice of an appropriate integrator.

  11. The two rigid body interaction using angular momentum theory formulae

    NASA Astrophysics Data System (ADS)

    Boué, Gwenaël

    2017-01-01

    This work presents an elegant formalism to model the evolution of the full two rigid body problem. The equations of motion, given in a Cartesian coordinate system, are expressed in terms of spherical harmonics and Wigner D-matrices. The algorithm benefits from the numerous recurrence relations satisfied by these functions allowing a fast evaluation of the mutual potential. Moreover, forces and torques are straightforwardly obtained by application of ladder operators taken from the angular momentum theory and commonly used in quantum mechanics. A numerical implementation of this algorithm is made. Tests show that the present code is significantly faster than those currently available in literature.

  12. Small Moving Rigid Body into a Viscous Incompressible Fluid

    NASA Astrophysics Data System (ADS)

    Lacave, Christophe; Takahashi, Takéo

    2017-03-01

    We consider a single disk moving under the influence of a two dimensional viscous fluid and we study the asymptotic as the size of the solid tends to zero. If the density of the solid is independent of ɛ, the energy equality is not sufficient to obtain a uniform estimate for the solid velocity. This will be achieved thanks to the optimal L p - L q decay estimates of the semigroup associated to the fluid-rigid body system and to a fixed point argument. Next, we will deduce the convergence to the solution of the Navier-Stokes equations in R2.

  13. The 3D scanner for measuring body surface area: a simplified calculation in the Chinese adult.

    PubMed

    Yu, Chi-Yuan; Lo, Yu-Hung; Chiou, Wen-Ko

    2003-05-01

    Three-dimensional (3D) surface anthropometry enables us to extend the study to 3D geometry and morphology of mainly external human body tissues. A model is presented for estimation of human body surface area (BSA), which is identical in form to the one proposed in 1916 by DuBois and DuBois is presented. The purpose of this study is to measure BSA, using 3D scanner, and to derive a simple BSA estimation formula for the Chinese adults. In as little as 12s, the Chang Gung Whole-Body Scanner (CGWBS) allows you to capture the shape of the entire human body. The total error in BSA measurement due to scanning measurement and software computational error is less than 1%. The 3D anthropometric measures in a healthy population (n=3951) were investigated, and the results were used to derive a BSA estimation formula. The results seem to be comparable to previous data that measured BSA using traditional methods. The BSA estimation model of this study also validated using 300 new measurements along with the formulae proposed in previous researches. The result suggests that our formula better fits our adults.

  14. YAP is essential for tissue tension to ensure vertebrate 3D body shape.

    PubMed

    Porazinski, Sean; Wang, Huijia; Asaoka, Yoichi; Behrndt, Martin; Miyamoto, Tatsuo; Morita, Hitoshi; Hata, Shoji; Sasaki, Takashi; Krens, S F Gabriel; Osada, Yumi; Asaka, Satoshi; Momoi, Akihiro; Linton, Sarah; Miesfeld, Joel B; Link, Brian A; Senga, Takeshi; Castillo-Morales, Atahualpa; Urrutia, Araxi O; Shimizu, Nobuyoshi; Nagase, Hideaki; Matsuura, Shinya; Bagby, Stefan; Kondoh, Hisato; Nishina, Hiroshi; Heisenberg, Carl-Philipp; Furutani-Seiki, Makoto

    2015-05-14

    Vertebrates have a unique 3D body shape in which correct tissue and organ shape and alignment are essential for function. For example, vision requires the lens to be centred in the eye cup which must in turn be correctly positioned in the head. Tissue morphogenesis depends on force generation, force transmission through the tissue, and response of tissues and extracellular matrix to force. Although a century ago D'Arcy Thompson postulated that terrestrial animal body shapes are conditioned by gravity, there has been no animal model directly demonstrating how the aforementioned mechano-morphogenetic processes are coordinated to generate a body shape that withstands gravity. Here we report a unique medaka fish (Oryzias latipes) mutant, hirame (hir), which is sensitive to deformation by gravity. hir embryos display a markedly flattened body caused by mutation of YAP, a nuclear executor of Hippo signalling that regulates organ size. We show that actomyosin-mediated tissue tension is reduced in hir embryos, leading to tissue flattening and tissue misalignment, both of which contribute to body flattening. By analysing YAP function in 3D spheroids of human cells, we identify the Rho GTPase activating protein ARHGAP18 as an effector of YAP in controlling tissue tension. Together, these findings reveal a previously unrecognised function of YAP in regulating tissue shape and alignment required for proper 3D body shape. Understanding this morphogenetic function of YAP could facilitate the use of embryonic stem cells to generate complex organs requiring correct alignment of multiple tissues.

  15. Plane stress problems using hysteretic rigid body spring network models

    NASA Astrophysics Data System (ADS)

    Christos, Sofianos D.; Vlasis, Koumousis K.

    2016-08-01

    In this work, a discrete numerical scheme is presented capable of modeling the hysteretic behavior of 2D structures. Rigid Body Spring Network (RBSN) models that were first proposed by Kawai (Nucl Eng Des 48(1):29-207, 1978) are extended to account for hysteretic elastoplastic behavior. Discretization is based on Voronoi tessellation, as proposed specifically for RBSN models to ensure uniformity. As a result, the structure is discretized into convex polygons that form the discrete rigid bodies of the model. These are connected with three zero length, i.e., single-node springs in the middle of their common facets. The springs follow the smooth hysteretic Bouc-Wen model which efficiently incorporates classical plasticity with no direct reference to a yield surface. Numerical results for both static and dynamic loadings are presented, which validate the proposed simplified spring-mass formulation. In addition, they verify the model's applicability on determining primarily the displacement field and plastic zones compared to the standard elastoplastic finite element method.

  16. Computational Fluid Dynamics Demonstration of Rigid Bodies in Motion

    NASA Technical Reports Server (NTRS)

    Camarena, Ernesto; Vu, Bruce T.

    2011-01-01

    The Design Analysis Branch (NE-Ml) at the Kennedy Space Center has not had the ability to accurately couple Rigid Body Dynamics (RBD) and Computational Fluid Dynamics (CFD). OVERFLOW-D is a flow solver that has been developed by NASA to have the capability to analyze and simulate dynamic motions with up to six Degrees of Freedom (6-DOF). Two simulations were prepared over the course of the internship to demonstrate 6DOF motion of rigid bodies under aerodynamic loading. The geometries in the simulations were based on a conceptual Space Launch System (SLS). The first simulation that was prepared and computed was the motion of a Solid Rocket Booster (SRB) as it separates from its core stage. To reduce computational time during the development of the simulation, only half of the physical domain with respect to the symmetry plane was simulated. Then a full solution was prepared and computed. The second simulation was a model of the SLS as it departs from a launch pad under a 20 knot crosswind. This simulation was reduced to Two Dimensions (2D) to reduce both preparation and computation time. By allowing 2-DOF for translations and 1-DOF for rotation, the simulation predicted unrealistic rotation. The simulation was then constrained to only allow translations.

  17. A new 3D reconstruction method of small solar system bodies

    NASA Astrophysics Data System (ADS)

    Capanna, C.; Jorda, L.; Lamy, P.; Gesquiere, G.

    2011-10-01

    The 3D reconstruction of small solar system bodies consitutes an essential step toward understanding and interpreting their physical and geological properties. We propose a new reconstruction method by photoclinometry based on the minimization of the chisquare difference between observed and synthetic images by deformation of a 3D triangular mesh. This method has been tested on images of the two asteroids (2867) Steins and (21) Lutetia observed during ESA's ROSETTA mission, and it will be applied to elaborate digital terrain models from images of the asteroid (4) Vesta, the target of NASA's DAWN spacecraft.

  18. Comparison of outcomes of tricuspid annuloplasty with 3D-rigid versus flexible prosthetic ring for functional tricuspid regurgitation secondary to rheumatic mitral valve disease

    PubMed Central

    Wang, Haiping; Wang, Xin; Lv, Zhenqian; Liu, Xiaojun

    2016-01-01

    Background Annuloplasty bands and rings are widely used for repairing functional tricuspid regurgitation (FTR). However, the question regarding which is the ideal annuloplasty device remains unclear. The aim of this study was to compare the efficacy and mid-term durability of tricuspid ring annuloplasty for FTR secondary to rheumatic mitral valve disease using flexible Cosgrove-Edwards band and the rigid Edwards MC3 ring (Edwards Lifesciences, LLC, Irvine, CA, USA). Methods We retrospectively collected the clinical data of those who underwent mitral valve replacement (MVR) in concomitant with tricuspid ring annuloplasty from 2009 to 2013. The flexible band was used in 46 patients (flexible group), and the 3D rigid ring was used in 60 patients (rigid group). Echocardiographic evaluation of tricuspid function was performed preoperatively and postoperatively. Results The grade of TR was significantly improved compared to preoperative values in two groups. There was no significant difference regarding postoperative TR grade between the two groups at 1 week and 2–3 months but there was statistical significant difference at postoperative 6–12 months, and 2–3 years. During the follow up period, 25 of 46 patients (54.3%) in flexible group and 22 of 60 patients (30.3%) in rigid group developed recurrent TR. Freedom from recurrent TR in flexible group is significant lower than rigid group in each postoperative follow up period. Conclusions These findings suggest that 3D rigid ring annuloplasty might be more effective for tricuspid ring annuloplasty in FTR in mid-term postoperative periods when compared to flexible band. PMID:28066587

  19. Robust automatic measurement of 3D scanned models for the human body fat estimation.

    PubMed

    Giachetti, Andrea; Lovato, Christian; Piscitelli, Francesco; Milanese, Chiara; Zancanaro, Carlo

    2015-03-01

    In this paper, we present an automatic tool for estimating geometrical parameters from 3-D human scans independent on pose and robustly against the topological noise. It is based on an automatic segmentation of body parts exploiting curve skeleton processing and ad hoc heuristics able to remove problems due to different acquisition poses and body types. The software is able to locate body trunk and limbs, detect their directions, and compute parameters like volumes, areas, girths, and lengths. Experimental results demonstrate that measurements provided by our system on 3-D body scans of normal and overweight subjects acquired in different poses are highly correlated with the body fat estimates obtained on the same subjects with dual-energy X-rays absorptiometry (DXA) scanning. In particular, maximal lengths and girths, not requiring precise localization of anatomical landmarks, demonstrate a good correlation (up to 96%) with the body fat and trunk fat. Regression models based on our automatic measurements can be used to predict body fat values reasonably well.

  20. Subject-specific body segment parameter estimation using 3D photogrammetry with multiple cameras

    PubMed Central

    Morris, Mark; Sellers, William I.

    2015-01-01

    Inertial properties of body segments, such as mass, centre of mass or moments of inertia, are important parameters when studying movements of the human body. However, these quantities are not directly measurable. Current approaches include using regression models which have limited accuracy: geometric models with lengthy measuring procedures or acquiring and post-processing MRI scans of participants. We propose a geometric methodology based on 3D photogrammetry using multiple cameras to provide subject-specific body segment parameters while minimizing the interaction time with the participants. A low-cost body scanner was built using multiple cameras and 3D point cloud data generated using structure from motion photogrammetric reconstruction algorithms. The point cloud was manually separated into body segments, and convex hulling applied to each segment to produce the required geometric outlines. The accuracy of the method can be adjusted by choosing the number of subdivisions of the body segments. The body segment parameters of six participants (four male and two female) are presented using the proposed method. The multi-camera photogrammetric approach is expected to be particularly suited for studies including populations for which regression models are not available in literature and where other geometric techniques or MRI scanning are not applicable due to time or ethical constraints. PMID:25780778

  1. 3D Reconstruction of Static Human Body with a Digital Camera

    NASA Astrophysics Data System (ADS)

    Remondino, Fabio

    2003-01-01

    Nowadays the interest in 3D reconstruction and modeling of real humans is one of the most challenging problems and a topic of great interest. The human models are used for movies, video games or ergonomics applications and they are usually created with 3D scanner devices. In this paper a new method to reconstruct the shape of a static human is presented. Our approach is based on photogrammetric techniques and uses a sequence of images acquired around a standing person with a digital still video camera or with a camcorder. First the images are calibrated and orientated using a bundle adjustment. After the establishment of a stable adjusted image block, an image matching process is performed between consecutive triplets of images. Finally the 3D coordinates of the matched points are computed with a mean accuracy of ca 2 mm by forward ray intersection. The obtained point cloud can then be triangulated to generate a surface model of the body or a virtual human model can be fitted to the recovered 3D data. Results of the 3D human point cloud with pixel color information are presented.

  2. Zebrafish response to 3D printed shoals of conspecifics: the effect of body size.

    PubMed

    Bartolini, Tiziana; Mwaffo, Violet; Showler, Ashleigh; Macrì, Simone; Butail, Sachit; Porfiri, Maurizio

    2016-02-18

    Recent progress in three-dimensional (3D) printing technology has enabled rapid prototyping of complex models at a limited cost. Virtually every research laboratory has access to a 3D printer, which can assist in the design and implementation of hypothesis-driven studies on animal behavior. In this study, we explore the possibility of using 3D printing technology to understand the role of body size in the social behavior of the zebrafish model organism. In a dichotomous preference test, we study the behavioral response of zebrafish to shoals of 3D printed replicas of varying size. We systematically vary the size of each replica without altering the coloration, aspect ratio, and stripe patterns, which are all selected to closely mimic zebrafish morphophysiology. The replicas are actuated through a robotic manipulator, mimicking the natural motion of live subjects. Zebrafish preference is assessed by scoring the time spent in the vicinity of the shoal of replicas, and the information theoretic construct of transfer entropy is used to further elucidate the influence of the replicas on zebrafish motion. Our results demonstrate that zebrafish adjust their behavior in response to variations in the size of the replicas. Subjects exhibit an avoidance reaction for larger replicas, and they are attracted toward and influenced by smaller replicas. The approach presented in this study, integrating 3D printing technology, robotics, and information theory, is expected to significantly aid preclinical research on zebrafish behavior.

  3. Leonhard Euler and the mechanics of rigid bodies

    NASA Astrophysics Data System (ADS)

    Marquina, J. E.; Marquina, M. L.; Marquina, V.; Hernández-Gómez, J. J.

    2017-01-01

    In this work we present the original ideas and the construction of the rigid bodies theory realised by Leonhard Euler between 1738 and 1775. The number of treatises written by Euler on this subject is enormous, including the most notorious Scientia Navalis (1749), Decouverte d’un noveau principe de mecanique (1752), Du mouvement de rotation des corps solides autour d’un axe variable (1765), Theoria motus corporum solidorum seu rigidorum (1765) and Nova methodus motu corporum rigidorum determinandi (1776), in which he developed the ideas of the instantaneous rotation axis, the so-called Euler equations and angles, the components of what is now known as the inertia tensor, the principal axes of inertia, and, finally, the generalisation of the translation and rotation movement equations for any system. Euler, the man who ‘put most of mechanics into its modern form’ (Truesdell 1968 Essays in the History of Mechanics (Berlin: Springer) p 106).

  4. Normal mode study of the earth's rigid body motions

    NASA Technical Reports Server (NTRS)

    Chao, B. F.

    1983-01-01

    In this paper it is shown that the earth's rigid body (rb) motions can be represented by an analytical set of eigensolutions to the equation of motion for elastic-gravitational free oscillations. Thus each degree of freedom in the rb motion is associated with a rb normal mode. Cases of both nonrotating and rotating earth models are studied, and it is shown that the rb modes do incorporate neatly into the earth's system of normal modes of free oscillation. The excitation formula for the rb modes are also obtained, based on normal mode theory. Physical implications of the results are summarized and the fundamental differences between rb modes and seismic modes are emphasized. In particular, it is ascertained that the Chandler wobble, being one of the rb modes belonging to the rotating earth, can be studied using the established theory of normal modes.

  5. Perineal body anatomy in living women: 3-D analysis using thin-slice magnetic resonance imaging

    PubMed Central

    Larson, Kindra A.; Yousuf, Aisha; Lewicky-Gaupp, Christina; Fenner, Dee E.; DeLancey, John O.L.

    2012-01-01

    Objective To describe a framework for visualizing the perineal body's complex anatomy using thin-slice MR imaging. Study Design Two mm-thick MR images were acquired in 11 women with normal pelvic support and no incontinence/prolapse symptoms. Anatomic structures were analyzed in axial, sagittal and coronal slices. 3-D models were generated from these images. Results Three distinct perineal body regions are visible on MRI: (1) a superficial region at the level of the vestibular bulb, (2) a mid region at the proximal end of the superficial transverse perineal muscle, and (3) a deep region at the level of the midurethra and puborectalis muscle. Structures are best visualized on axial scans while cranio-caudal relationships are appreciated on sagittal scans. The 3-D model further clarifies inter-relationships. Conclusion Advances in MR technology allow visualization of perineal body anatomy in living women and development of 3D models which enhance our understanding of its three different regions: superficial, mid and deep. PMID:21055513

  6. SVD-GFD scheme to simulate complex moving body problems in 3D space

    NASA Astrophysics Data System (ADS)

    Wang, X. Y.; Yu, P.; Yeo, K. S.; Khoo, B. C.

    2010-03-01

    The present paper presents a hybrid meshfree-and-Cartesian grid method for simulating moving body incompressible viscous flow problems in 3D space. The method combines the merits of cost-efficient and accurate conventional finite difference approximations on Cartesian grids with the geometric freedom of generalized finite difference (GFD) approximations on meshfree grids. Error minimization in GFD is carried out by singular value decomposition (SVD). The Arbitrary Lagrangian-Eulerian (ALE) form of the Navier-Stokes equations on convecting nodes is integrated by a fractional-step projection method. The present hybrid grid method employs a relatively simple mode of nodal administration. Nevertheless, it has the geometrical flexibility of unstructured mesh-based finite-volume and finite element methods. Boundary conditions are precisely implemented on boundary nodes without interpolation. The present scheme is validated by a moving patch consistency test as well as against published results for 3D moving body problems. Finally, the method is applied on low-Reynolds number flapping wing applications, where large boundary motions are involved. The present study demonstrates the potential of the present hybrid meshfree-and-Cartesian grid scheme for solving complex moving body problems in 3D.

  7. Fluid-Structure Interactions with Flexible and Rigid Bodies

    NASA Astrophysics Data System (ADS)

    Daily, David Jesse

    Fluid structure interactions occur to some extent in nearly every type of fluid flow. Understanding how structures interact with fluids and visa-versa is of vital importance in many engineering applications. The purpose of this research is to explore how fluids interact with flexible and rigid structures. A computational model was used to model the fluid structure interactions of vibrating synthetic vocal folds. The model simulated the coupling of the fluid and solid domains using a fluid-structure interface boundary condition. The fluid domain used a slightly compressible flow solver to allow for the possibility of acoustic coupling with the subglottal geometry and vibration of the vocal fold model. As the subglottis lengthened, the frequency of vibration decreased until a new acoustic mode could form in the subglottis. Synthetic aperture particle image velocimetry (SAPIV) is a three-dimensional particle tracking technique. SAPIV was used to image the jet of air that emerges from vibrating human vocal folds (glottal jet) during phonation. The three-dimensional reconstruction of the glottal jet found faint evidence of flow characteristics seen in previous research, such as axis-switching, but did not have sufficient resolution to detect small features. SAPIV was further applied to reconstruct the smaller flow characteristics of the glottal jet of vibrating synthetic vocal folds. Two- and four-layer synthetic vocal fold models were used to determine how the glottal jet from the synthetic models compared to the glottal jet from excised human vocal folds. The two- and four-layer models clearly exhibited axis-switching which has been seen in other 3D analyses of the glottal jet. Cavitation in a quiescent fluid can break a rigid structure such as a glass bottle. A new cavitation number was derived to include acceleration and pressure head at cavitation onset. A cavitation stick was used to validate the cavitation number by filling it with different depths and hitting

  8. 3D reconstruction of internal structure of animal body using near-infrared light

    NASA Astrophysics Data System (ADS)

    Tran, Trung Nghia; Yamamoto, Kohei; Namita, Takeshi; Kato, Yuji; Shimizu, Koichi

    2014-03-01

    To realize three-dimensional (3D) optical imaging of the internal structure of animal body, we have developed a new technique to reconstruct CT images from two-dimensional (2D) transillumination images. In transillumination imaging, the image is blurred due to the strong scattering in the tissue. We had developed a scattering suppression technique using the point spread function (PSF) for a fluorescent light source in the body. In this study, we have newly proposed a technique to apply this PSF for a light source to the image of unknown light-absorbing structure. The effectiveness of the proposed technique was examined in the experiments with a model phantom and a mouse. In the phantom experiment, the absorbers were placed in the tissue-equivalent medium to simulate the light-absorbing organs in mouse body. Near-infrared light was illuminated from one side of the phantom and the image was recorded with CMOS camera from another side. Using the proposed techniques, the scattering effect was efficiently suppressed and the absorbing structure can be visualized in the 2D transillumination image. Using the 2D images obtained in many different orientations, we could reconstruct the 3D image. In the mouse experiment, an anesthetized mouse was held in an acrylic cylindrical holder. We can visualize the internal organs such as kidneys through mouse's abdomen using the proposed technique. The 3D image of the kidneys and a part of the liver were reconstructed. Through these experimental studies, the feasibility of practical 3D imaging of the internal light-absorbing structure of a small animal was verified.

  9. Hamiltonian Dynamics of Several Rigid Bodies Interacting with Point Vortices

    NASA Astrophysics Data System (ADS)

    Weißmann, Steffen

    2014-04-01

    We derive the dynamics of several rigid bodies of arbitrary shape in a two-dimensional inviscid and incompressible fluid, whose vorticity is given by point vortices. We adopt the idea of Vankerschaver et al. (J. Geom. Mech. 1(2): 223-226, 2009) to derive the Hamiltonian formulation via symplectic reduction from a canonical Hamiltonian system. The reduced system is described by a noncanonical symplectic form, which has previously been derived for a single circular disk using heavy differential-geometric machinery in an infinite-dimensional setting. In contrast, our derivation makes use of the fact that the dynamics of the fluid, and thus the point vortex dynamics, is determined from first principles. Using this knowledge we can directly determine the dynamics on the reduced, finite-dimensional phase space, using only classical mechanics. Furthermore, our approach easily handles several bodies of arbitrary shape. From the Hamiltonian description we derive a Lagrangian formulation, which enables the system for variational time integrators. We briefly describe how to implement such a numerical scheme and simulate different configurations for validation.

  10. A method of 3D reconstruction via ISAR Sequences based on scattering centers association for space rigid object

    NASA Astrophysics Data System (ADS)

    Li, Gang; Zou, Jiangwei; Xu, Shiyou; Tian, Biao; Chen, Zengping

    2014-10-01

    In this paper the effects of orbits motion makes for scattering centers trajectory is analyzed, and introduced to scattering centers association, as a constraint. A screening method of feature points is presented to analysis the false points of reconstructed result, and the wrong association which lead these false points. The loop iteration between 3D reconstruction and association result makes the precision of final reconstructed result have a further improvement. The simulation data shows the validity of the algorithm.

  11. Evaluation of similarity measures for use in the intensity-based rigid 2D-3D registration for patient positioning in radiotherapy

    SciTech Connect

    Wu Jian; Kim, Minho; Peters, Jorg; Chung, Heeteak; Samant, Sanjiv S.

    2009-12-15

    Purpose: Rigid 2D-3D registration is an alternative to 3D-3D registration for cases where largely bony anatomy can be used for patient positioning in external beam radiation therapy. In this article, the authors evaluated seven similarity measures for use in the intensity-based rigid 2D-3D registration using a variation in Skerl's similarity measure evaluation protocol. Methods: The seven similarity measures are partitioned intensity uniformity, normalized mutual information (NMI), normalized cross correlation (NCC), entropy of the difference image, pattern intensity (PI), gradient correlation (GC), and gradient difference (GD). In contrast to traditional evaluation methods that rely on visual inspection or registration outcomes, the similarity measure evaluation protocol probes the transform parameter space and computes a number of similarity measure properties, which is objective and optimization method independent. The variation in protocol offers an improved property in the quantification of the capture range. The authors used this protocol to investigate the effects of the downsampling ratio, the region of interest, and the method of the digitally reconstructed radiograph (DRR) calculation [i.e., the incremental ray-tracing method implemented on a central processing unit (CPU) or the 3D texture rendering method implemented on a graphics processing unit (GPU)] on the performance of the similarity measures. The studies were carried out using both the kilovoltage (kV) and the megavoltage (MV) images of an anthropomorphic cranial phantom and the MV images of a head-and-neck cancer patient. Results: Both the phantom and the patient studies showed the 2D-3D registration using the GPU-based DRR calculation yielded better robustness, while providing similar accuracy compared to the CPU-based calculation. The phantom study using kV imaging suggested that NCC has the best accuracy and robustness, but its slow function value change near the global maximum requires a

  12. Web-based Three-dimensional Virtual Body Structures: W3D-VBS

    PubMed Central

    Temkin, Bharti; Acosta, Eric; Hatfield, Paul; Onal, Erhan; Tong, Alex

    2002-01-01

    Major efforts are being made to improve the teaching of human anatomy to foster cognition of visuospatial relationships. The Visible Human Project of the National Library of Medicine makes it possible to create virtual reality-based applications for teaching anatomy. Integration of traditional cadaver and illustration-based methods with Internet-based simulations brings us closer to this goal. Web-based three-dimensional Virtual Body Structures (W3D-VBS) is a next-generation immersive anatomical training system for teaching human anatomy over the Internet. It uses Visible Human data to dynamically explore, select, extract, visualize, manipulate, and stereoscopically palpate realistic virtual body structures with a haptic device. Tracking user’s progress through evaluation tools helps customize lesson plans. A self-guided “virtual tour” of the whole body allows investigation of labeled virtual dissections repetitively, at any time and place a user requires it. PMID:12223495

  13. Fluid force and static symmetry breaking modes of 3D bluff bodies.

    NASA Astrophysics Data System (ADS)

    Cadot, Olivier; Evrard, Antoine; DFA Team

    2015-11-01

    A cavity at the base of the squareback Ahmed model at Re =6.106 is able to reduce the base suction by 18% and the drag coefficient by 9%, while the flow at the separation remains unaffected. Instantaneous pressure measurements at the body base, fluid force measurements and wake velocity measurements are investigated varying the cavity depth from 0 to 35% of the base height. Due to the reflectional symmetry of the rectangular base, there are two Reflectional Symmetry Breaking (RSB) mirror modes present in the natural wake that switch from one to the other randomly in accordance with the recent findings of Grandemange et al. (2013). It is shown that these modes exhibit an energetic 3D static vortex system close to the base of the body. A sufficiently deep cavity is able to stabilize the wake toward a symmetry preserved wake, thus suppressing the RSB modes and leading to a weaker elliptical toric recirculation. The stabilization can be modeled with a Langevin equation. The plausible mechanism for drag reduction with the base cavity is based on the interaction of the static 3D vortex system of the RSB modes with the base and their suppression by stabilization. There are some strong evidences that this mechanism may be generalized to axisymmetric bodies with base cavity.

  14. Creation of 3D multi-body orthodontic models by using independent imaging sensors.

    PubMed

    Barone, Sandro; Paoli, Alessandro; Razionale, Armando Viviano

    2013-02-05

    In the field of dental health care, plaster models combined with 2D radiographs are widely used in clinical practice for orthodontic diagnoses. However, complex malocclusions can be better analyzed by exploiting 3D digital dental models, which allow virtual simulations and treatment planning processes. In this paper, dental data captured by independent imaging sensors are fused to create multi-body orthodontic models composed of teeth, oral soft tissues and alveolar bone structures. The methodology is based on integrating Cone-Beam Computed Tomography (CBCT) and surface structured light scanning. The optical scanner is used to reconstruct tooth crowns and soft tissues (visible surfaces) through the digitalization of both patients' mouth impressions and plaster casts. These data are also used to guide the segmentation of internal dental tissues by processing CBCT data sets. The 3D individual dental tissues obtained by the optical scanner and the CBCT sensor are fused within multi-body orthodontic models without human supervisions to identify target anatomical structures. The final multi-body models represent valuable virtual platforms to clinical diagnostic and treatment planning.

  15. Dynamical analysis of an orbiting three-rigid-body system

    SciTech Connect

    Pagnozzi, Daniele E-mail: james.biggs@strath.ac.uk; Biggs, James D. E-mail: james.biggs@strath.ac.uk

    2014-12-10

    The development of multi-joint-spacecraft mission concepts calls for a deeper understanding of their nonlinear dynamics to inform and enhance system design. This paper presents a study of a three-finite-shape rigid-body system under the action of an ideal central gravitational field. The aim of this paper is to gain an insight into the natural dynamics of this system. The Hamiltonian dynamics is derived and used to identify relative attitude equilibria of the system with respect to the orbital reference frame. Then a numerical investigation of the behaviour far from the equilibria is provided using tools from modern dynamical systems theory such as energy methods, phase portraits and Poincarè maps. Results reveal a complex structure of the dynamics as well as the existence of connections between some of the equilibria. Stable equilibrium configurations appear to be surrounded by very narrow regions of regular and quasi-regular motions. Trajectories evolve on chaotic motions in the rest of the domain.

  16. Incorporating 3D body motions into large-sized freeform surface conceptual design.

    PubMed

    Qin, Shengfeng; Wright, David K; Kang, Jingsheng; Prieto, P A

    2005-01-01

    Large-sized free-form surface design presents some challenges in practice. Especially at the conceptual design stage, sculpting physical models is still essential for surface development, because CAD models are less intuitive for designers to design and modify them. These sculpted physical models can be then scanned and converted into CAD models. However, if the physical models are too big, designers may have problems in finding a suitable position to conduct their operations or simply the models are difficult to be scanned in. We investigated a novel surface modelling approach by utilising a 3D motion capture system. For designing a large-sized surface, a network of splines is initially set up. Artists or designers wearing motion marks on their hands can then change shapes of the splines with their hands. Literarily they can move their body freely to any positions to perform their tasks. They can also move their hands in 3D free space to detail surface characteristics by their gestures. All their design motions are recorded in the motion capturing system and transferred into 3D curves and surfaces correspondingly. This paper reports this novel surface design method associated with some case studies.

  17. 4D VMAT, gated VMAT, and 3D VMAT for stereotactic body radiation therapy in lung

    NASA Astrophysics Data System (ADS)

    Chin, E.; Loewen, S. K.; Nichol, A.; Otto, K.

    2013-02-01

    Four-dimensional volumetric modulated arc therapy (4D VMAT) is a treatment strategy for lung cancers that aims to exploit relative target and tissue motion to improve organ at risk (OAR) sparing. The algorithm incorporates the entire patient respiratory cycle using 4D CT data into the optimization process. Resulting treatment plans synchronize the delivery of each beam aperture to a specific phase of target motion. Stereotactic body radiation therapy treatment plans for 4D VMAT, gated VMAT, and 3D VMAT were generated on three patients with non-small cell lung cancer. Tumour motion ranged from 1.4-3.4 cm. The dose and fractionation scheme was 48 Gy in four fractions. A B-spline transformation model registered the 4D CT images. 4D dose volume histograms (4D DVH) were calculated from total dose accumulated at the maximum exhalation. For the majority of OARs, gated VMAT achieved the most radiation sparing but treatment times were 77-148% longer than 3D VMAT. 4D VMAT plan qualities were comparable to gated VMAT, but treatment times were only 11-25% longer than 3D VMAT. 4D VMAT's improvement of healthy tissue sparing can allow for further dose escalation. Future study could potentially adapt 4D VMAT to irregular patient breathing patterns.

  18. Digimouse: a 3D whole body mouse atlas from CT and cryosection data

    NASA Astrophysics Data System (ADS)

    Dogdas, Belma; Stout, David; Chatziioannou, Arion F.; Leahy, Richard M.

    2007-02-01

    We have constructed a three-dimensional (3D) whole body mouse atlas from coregistered x-ray CT and cryosection data of a normal nude male mouse. High quality PET, x-ray CT and cryosection images were acquired post mortem from a single mouse placed in a stereotactic frame with fiducial markers visible in all three modalities. The image data were coregistered to a common coordinate system using the fiducials and resampled to an isotropic 0.1 mm voxel size. Using interactive editing tools we segmented and labelled whole brain, cerebrum, cerebellum, olfactory bulbs, striatum, medulla, masseter muscles, eyes, lachrymal glands, heart, lungs, liver, stomach, spleen, pancreas, adrenal glands, kidneys, testes, bladder, skeleton and skin surface. The final atlas consists of the 3D volume, in which the voxels are labelled to define the anatomical structures listed above, with coregistered PET, x-ray CT and cryosection images. To illustrate use of the atlas we include simulations of 3D bioluminescence and PET image reconstruction. Optical scatter and absorption values are assigned to each organ to simulate realistic photon transport within the animal for bioluminescence imaging. Similarly, 511 keV photon attenuation values are assigned to each structure in the atlas to simulate realistic photon attenuation in PET. The Digimouse atlas and data are available at http://neuroimage.usc.edu/Digimouse.html.

  19. Second-Order Inelastic Dynamic Analysis of 3D Semi-Rigid Steel Frames Under Earthquake Loads with Three Components

    SciTech Connect

    Ozakgul, Kadir

    2008-07-08

    In this study, it has been presented an algorithm for second-order elastoplastic dynamic time-history analysis of three dimensional frames that have steel members with semirigid joints. The proposed analysis accounts for material, geometric and connection nonlinearities. Material nonlinearity have been modeled by the Ramberg-Osgood relation. While the geometric nonlinearity caused by axial force has been described by the use of the geometric stiffness matrix, the nonlinearity caused by the interaction between the axial force and bending moment has been also described by the use of the stability functions. The independent hardening model has been used to describe the nonlinear behaviour of semi-rigid connections. Dynamic equation of motion has been solved by Newmark's constant acceleration method in time history domain.

  20. Constrained non-rigid registration for whole body image registration: method and validation

    NASA Astrophysics Data System (ADS)

    Li, Xia; Yankeelov, Thomas E.; Peterson, Todd E.; Gore, John C.; Dawant, Benoit M.

    2007-03-01

    3D intra- and inter-subject registration of image volumes is important for tasks that include measurements and quantification of temporal/longitudinal changes, atlas-based segmentation, deriving population averages, or voxel and tensor-based morphometry. A number of methods have been proposed to tackle this problem but few of them have focused on the problem of registering whole body image volumes acquired either from humans or small animals. These image volumes typically contain a large number of articulated structures, which makes registration more difficult than the registration of head images, to which the vast majority of registration algorithms have been applied. To solve this problem, we have previously proposed an approach, which initializes an intensity-based non-rigid registration algorithm with a point based registration technique [1, 2]. In this paper, we introduce new constraints into our non-rigid registration algorithm to prevent the bones from being deformed inaccurately. Results we have obtained show that the new constrained algorithm leads to better registration results than the previous one.

  1. Uniqueness of the angular velocity of a rigid body: Correction of two faulty proofs

    NASA Astrophysics Data System (ADS)

    Lemos, Nivaldo A.

    2000-07-01

    The angular velocity is an absolute or intrinsic property of a rigid body; that is, all points of a rotating rigid body have the same angular velocity. This fact is well known, but its proof is often erroneous. Here we correct two faulty proofs of this result, one in Goldstein's famous textbook and the other published nearly 30 years ago in this journal.

  2. Point-based rigid-body registration using an unscented Kalman filter.

    PubMed

    Moghari, Mehdi Hedjazi; Abolmaesumi, Purang

    2007-12-01

    We present and validate a novel registration algorithm mapping two data sets, generated from a rigid object, in the presence of Gaussian noise. The proposed method is based on the Unscented Kalman Filter (UKF) algorithm that is generally employed for analyzing nonlinear systems corrupted by additive Gaussian noise. First, we employ our proposed registration algorithm to fit two randomly generated data sets in the presence of isotropic Gaussian noise, when the corresponding points between the two data sets are assumed to be known. Then, we extend the registration method to the case where the data (with known correspondences) is stimulated by anisotropic Gaussian noise. The new registration method not only reliably converges to the correct registration solution, but it also estimates the variance, as a confidence measure, for each of the estimated registration transformation parameters. Furthermore, we employ the proposed registration algorithm for rigid-body, point-based registration where corresponding points between two registering data sets are unknown. The algorithm is tested on point data sets which are garnered from a pelvic cadaver and a scaphoid bone phantom by means of computed tomography (CT) and tracked free-hand ultrasound imaging. The collected 3-D points in the ultrasound frame are registered to the 3-D meshes in the CT frame by using the proposed and the standard Iterative Closest Points (ICP) registration algorithms. Experimental results demonstrate that our proposed method significantly outperforms the ICP registration algorithm in the presence of additive Gaussian noise. It is also shown that the proposed registration algorithm is more robust than the ICP registration algorithm in terms of outliers in data sets and initial misalignment between the two data sets.

  3. Real-time 3D visualization of the thoraco-abdominal surface during breathing with body movement and deformation extraction.

    PubMed

    Povšič, K; Jezeršek, M; Možina, J

    2015-07-01

    Real-time 3D visualization of the breathing displacements can be a useful diagnostic tool in order to immediately observe the most active regions on the thoraco-abdominal surface. The developed method is capable of separating non-relevant torso movement and deformations from the deformations that are solely related to breathing. This makes it possible to visualize only the breathing displacements. The system is based on the structured laser triangulation principle, with simultaneous spatial and color data acquisition of the thoraco-abdominal region. Based on the tracking of the attached passive markers, the torso movement and deformation is compensated using rigid and non-rigid transformation models on the three-dimensional (3D) data. The total time of 3D data processing together with visualization equals 20 ms per cycle.In vitro verification of the rigid movement extraction was performed using the iterative closest point algorithm as a reference. Furthermore, a volumetric evaluation on a live subject was performed to establish the accuracy of the rigid and non-rigid model. The root mean square deviation between the measured and the reference volumes shows an error of  ±0.08 dm(3) for rigid movement extraction. Similarly, the error was calculated to be  ±0.02 dm(3) for torsional deformation extraction and  ±0.11 dm(3) for lateral bending deformation extraction. The results confirm that during the torso movement and deformation, the proposed method is sufficiently accurate to visualize only the displacements related to breathing. The method can be used, for example, during the breathing exercise on an indoor bicycle or a treadmill.

  4. A new multiresolution method applied to the 3D reconstruction of small bodies

    NASA Astrophysics Data System (ADS)

    Capanna, C.; Jorda, L.; Lamy, P. L.; Gesquiere, G.

    2012-12-01

    The knowledge of the three-dimensional (3D) shape of small solar system bodies, such as asteroids and comets, is essential in determining their global physical properties (volume, density, rotational parameters). It also allows performing geomorphological studies of their surface through the characterization of topographic features, such as craters, faults, landslides, grooves, hills, etc.. In the case of small bodies, the shape is often only constrained by images obtained by interplanetary spacecrafts. Several techniques are available to retrieve 3D global shapes from these images. Stereography which relies on control points has been extensively used in the past, most recently to reconstruct the nucleus of comet 9P/Tempel 1 [Thomas (2007)]. The most accurate methods are however photogrammetry and photoclinometry, often used in conjunction with stereography. Stereophotogrammetry (SPG) has been used to reconstruct the shapes of the nucleus of comet 19P/Borrelly [Oberst (2004)] and of the asteroid (21) Lutetia [Preusker (2012)]. Stereophotoclinometry (SPC) has allowed retrieving an accurate shape of the asteroids (25143) Itokawa [Gaskell (2008)] and (2867) Steins [Jorda (2012)]. We present a new photoclinometry method based on the deformation of a 3D triangular mesh [Capanna (2012)] using a multi-resolution scheme which starts from a sphere of 300 facets and yields a shape model with 100; 000 facets. Our strategy is inspired by the "Full Multigrid" method [Botsch (2007)] and consists in going alternatively between two resolutions in order to obtain an optimized shape model at a given resolution before going to the higher resolution. In order to improve the robustness of our method, we use a set of control points obtained by stereography. Our method has been tested on images acquired by the OSIRIS visible camera, aboard the Rosetta spacecraft of the European Space Agency, during the fly-by of asteroid (21) Lutetia in July 2010. We present the corresponding 3D shape

  5. Rigid model-based 3D segmentation of the bones of joints in MR and CT images for motion analysis.

    PubMed

    Liu, Jiamin; Udupa, Jayaram K; Saha, Punam K; Odhner, Dewey; Hirsch, Bruce E; Siegler, Sorin; Simon, Scott; Winkelstein, Beth A

    2008-08-01

    There are several medical application areas that require the segmentation and separation of the component bones of joints in a sequence of images of the joint acquired under various loading conditions, our own target area being joint motion analysis. This is a challenging problem due to the proximity of bones at the joint, partial volume effects, and other imaging modality-specific factors that confound boundary contrast. In this article, a two-step model-based segmentation strategy is proposed that utilizes the unique context of the current application wherein the shape of each individual bone is preserved in all scans of a particular joint while the spatial arrangement of the bones alters significantly among bones and scans. In the first step, a rigid deterministic model of the bone is generated from a segmentation of the bone in the image corresponding to one position of the joint by using the live wire method. Subsequently, in other images of the same joint, this model is used to search for the same bone by minimizing an energy function that utilizes both boundary- and region-based information. An evaluation of the method by utilizing a total of 60 data sets on MR and CT images of the ankle complex and cervical spine indicates that the segmentations agree very closely with the live wire segmentations, yielding true positive and false positive volume fractions in the range 89%-97% and 0.2%-0.7%. The method requires 1-2 minutes of operator time and 6-7 min of computer time per data set, which makes it significantly more efficient than live wire-the method currently available for the task that can be used routinely.

  6. Extracellular matrix composition and rigidity regulate invasive behavior and response to PDT in 3D pancreatic tumor models

    NASA Astrophysics Data System (ADS)

    Cramer, Gwendolyn; El-Hamidi, Hamid; Jafari, Seyedehrojin; Jones, Dustin P.; Celli, Jonathan P.

    2016-03-01

    The composition and mechanical compliance of the extracellular matrix (ECM) have been shown to serve as regulators of tumor growth and invasive behavior. These effects may be particularly relevant in tumors of the pancreas, noted for a profound desmoplastic reaction and an abundance of stroma rich in ECM. In view of recent progress in the clinical implementation of photodynamic therapy (PDT) for pancreatic tumors, in this report we examine how ECM composition and rheological properties impact upon invasive behavior and response to PDT in 3D multicellular pancreatic tumor spheroids in ECM environments with characterized rheological properties. Tumor spheroids were cultured initially in attachment-free conditions to form millimeter-sized spheroids that were transplanted into reconstituted ECM microenvironments (Matrigel and Type I Collagen) that were characterized using bulk oscillatory shear rheology. Analysis of growth behavior shows that the soft collagen ECM promoted growth and extensive invasion and this microenvironment was used in subsequent assessment of PDT and chemotherapy response. Evaluation of treatment response revealed that primary tumor nodule growth is inhibited more effectively with PDT, while verteporfin PDT response is significantly enhanced in the ECM-infiltrating populations that are non-responsive to oxaliplatin chemotherapy. This finding is potentially significant, suggesting the potential for PDT to target these clinically problematic invasive populations that are associated with aggressive metastatic progression and chemoresistance. Experiments to further validate and identify the mechanistic basis of this observation are ongoing.

  7. A fast rigid-registration method of inferior limb X-ray image and 3D CT images for TKA surgery

    NASA Astrophysics Data System (ADS)

    Ito, Fumihito; O. D. A, Prima; Uwano, Ikuko; Ito, Kenzo

    2010-03-01

    In this paper, we propose a fast rigid-registration method of inferior limb X-ray films (two-dimensional Computed Radiography (CR) images) and three-dimensional Computed Tomography (CT) images for Total Knee Arthroplasty (TKA) surgery planning. The position of the each bone, such as femur and tibia (shin bone), in X-ray film and 3D CT images is slightly different, and we must pay attention how to use the two different images, since X-ray film image is captured in the standing position, and 3D CT is captured in decubitus (face up) position, respectively. Though the conventional registration mainly uses cross-correlation function between two images,and utilizes optimization techniques, it takes enormous calculation time and it is difficult to use it in interactive operations. In order to solve these problems, we calculate the center line (bone axis) of femur and tibia (shin bone) automatically, and we use them as initial positions for the registration. We evaluate our registration method by using three patient's image data, and we compare our proposed method and a conventional registration, which uses down-hill simplex algorithm. The down-hill simplex method is an optimization algorithm that requires only function evaluations, and doesn't need the calculation of derivatives. Our registration method is more effective than the downhill simplex method in computational time and the stable convergence. We have developed the implant simulation system on a personal computer, in order to support the surgeon in a preoperative planning of TKA. Our registration method is implemented in the simulation system, and user can manipulate 2D/3D translucent templates of implant components on X-ray film and 3D CT images.

  8. Two novel 3D copper(II) complexes based on a rigid bis-pyridyl-bis-amide and two polycarboxylates mixed ligands: Assembly, structures and properties

    NASA Astrophysics Data System (ADS)

    Wang, Xiu-Li; Mu, Bao; Lin, Hong-Yan; Yang, Song; Liu, Guo-Cheng

    2013-03-01

    Two novel three-dimensional (3D) copper(II) complexes [Cu3(3-bpcb)(1,2-BDC)2(μ2-OH)2] (1) and [Cu2(3-bpcb)1.5(SIP)(μ3-OH)]·H2O (2), based on a rigid bis-pyridyl-bis-amide ligand [3-bpcb = N,N'-bis(3-pyridinecarboxamide)-1,4-benzene] and two different polycarboxylates [1,2-H2BDC = 1,2-benzenedicarboxylic acid, NaH2SIP = sodium 5-sulfoisophthalic acid] have been prepared under hydrothermal conditions. Single crystal X-ray diffraction analysis shows that complex 1 exhibits a 4-nodal mixed (3,4,4,5)-connected 3D structure with the (3·4·5)2(3·42·5·86)2(32·8·92·10)(42·82·102) Schläfli symbol, which is constructed from two-dimensional (2D) Cu(II)-μ2-OH-3-bpcb layers (3-bpcb: μ4-bridging coordination mode via two pyridyl nitrogen and two carbonyl oxygen atoms) and the 1,2-BDC bridging ligands. Complex 2 is also a 3D coordination polymer constructed from the μ2-bridging 3-bpcb ligands (via two pyridyl nitrogen atoms) and the 2D Cu(II)-μ3-OH-SIP sheets containing tetranuclear copper clusters, showing a novel 3-nodal (5,6,6)-connected (33·43·53·63·72·8)(33·43·53·6)(33·46·54·62) topology. The differences between the final 3D structures for complexes 1 and 2 might be attributed to the different aromatic polycarboxylates and the bis-pyridyl-bis-amide ligand with different coordination modes. Moreover, the electrochemical behavior of complex 1 and the fluorescence properties of the complexes 1-2 have been investigated.

  9. 3D Measurement of Forearm and Upper Arm during Throwing Motion using Body Mounted Sensor

    NASA Astrophysics Data System (ADS)

    Koda, Hideharu; Sagawa, Koichi; Kuroshima, Kouta; Tsukamoto, Toshiaki; Urita, Kazutaka; Ishibashi, Yasuyuki

    The aim of this study is to propose the measurement method of three-dimensional (3D) movement of forearm and upper arm during pitching motion of baseball using inertial sensors without serious consideration of sensor installation. Although high accuracy measurement of sports motion is achieved by using optical motion capture system at present, it has some disadvantages such as the calibration of cameras and limitation of measurement place. Whereas the proposed method for 3D measurement of pitching motion using body mounted sensors provides trajectory and orientation of upper arm by the integration of acceleration and angular velocity measured on upper limb. The trajectory of forearm is derived so that the elbow joint axis of forearm corresponds to that of upper arm. Spatial relation between upper limb and sensor system is obtained by performing predetermined movements of upper limb and utilizing angular velocity and gravitational acceleration. The integration error is modified so that the estimated final position, velocity and posture of upper limb agree with the actual ones. The experimental results of the measurement of pitching motion show that trajectories of shoulder, elbow and wrist estimated by the proposed method are highly correlated to those from the motion capture system within the estimation error of about 10 [%].

  10. Optoacoustic 3D whole-body tomography: experiments in nude mice

    NASA Astrophysics Data System (ADS)

    Brecht, Hans-Peter; Su, Richard; Fronheiser, Matt; Ermilov, Sergey A.; Conjusteau, André; Liopo, Anton; Motamedi, Massoud; Oraevsky, Alexander A.

    2009-02-01

    We developed a 3D whole-body optoacoustic tomography system for applications in preclinical research on mice. The system is capable of generating images with resolution better than 0.6 mm. Two pulsed lasers, an Alexandrite laser operating at 755 nm and a Nd:YAG laser operating at 532 nm and 1064nm were used for light delivery. The tomographic images were obtained while the objects of study (phantoms or mice) were rotated within a sphere outlined by a concave arc-shaped array of 64 piezo-composite transducers. During the scan, the mouse was illuminated orthogonally to the array with two wide beams of light from a bifurcated fiber bundle. Illumination at 532 nm showed superficial vasculature, but limited penetration depth at this wavelength prevented the detection of deeper structures. Illumination at 755 and 1064 nm showed organs and blood vessels, respectively. Filtering of the optoacoustic signals using high frequency enhancing wavelets further emphasized the smaller blood vessels.

  11. Gravity Anomalies of Arbitrary 3D Polyhedral Bodies with Horizontal and Vertical Mass Contrasts

    NASA Astrophysics Data System (ADS)

    Ren, Zhengyong; Chen, Chaojian; Pan, Kejia; Kalscheuer, Thomas; Maurer, Hansruedi; Tang, Jingtian

    2017-03-01

    During the last 15 years, more attention has been paid to derive analytic formulae for the gravitational potential and field of polyhedral mass bodies with complicated polynomial density contrasts, because such formulae can be more suitable to approximate the true mass density variations of the earth (e.g., sedimentary basins and bedrock topography) than methods that use finer volume discretization and constant density contrasts. In this study, we derive analytic formulae for gravity anomalies of arbitrary polyhedral bodies with complicated polynomial density contrasts in 3D space. The anomalous mass density is allowed to vary in both horizontal and vertical directions in a polynomial form of λ =ax^m+by^n+cz^t, where m, n, t are nonnegative integers and a, b, c are coefficients of mass density. First, the singular volume integrals of the gravity anomalies are transformed to regular or weakly singular surface integrals over each polygon of the polyhedral body. Then, in terms of the derived singularity-free analytic formulae of these surface integrals, singularity-free analytic formulae for gravity anomalies of arbitrary polyhedral bodies with horizontal and vertical polynomial density contrasts are obtained. For an arbitrary polyhedron, we successfully derived analytic formulae of the gravity potential and the gravity field in the case of m≤ 1, n≤ 1, t≤ 1, and an analytic formula of the gravity potential in the case of m=n=t=2. For a rectangular prism, we derive an analytic formula of the gravity potential for m≤ 3, n≤ 3 and t≤ 3 and closed forms of the gravity field are presented for m≤ 1, n≤ 1 and t≤ 4. Besides generalizing previously published closed-form solutions for cases of constant and linear mass density contrasts to higher polynomial order, to our best knowledge, this is the first time that closed-form solutions are presented for the gravitational potential of a general polyhedral body with quadratic density contrast in all spatial

  12. Gravity Anomalies of Arbitrary 3D Polyhedral Bodies with Horizontal and Vertical Mass Contrasts

    NASA Astrophysics Data System (ADS)

    Ren, Zhengyong; Chen, Chaojian; Pan, Kejia; Kalscheuer, Thomas; Maurer, Hansruedi; Tang, Jingtian

    2016-11-01

    During the last 15 years, more attention has been paid to derive analytic formulae for the gravitational potential and field of polyhedral mass bodies with complicated polynomial density contrasts, because such formulae can be more suitable to approximate the true mass density variations of the earth (e.g., sedimentary basins and bedrock topography) than methods that use finer volume discretization and constant density contrasts. In this study, we derive analytic formulae for gravity anomalies of arbitrary polyhedral bodies with complicated polynomial density contrasts in 3D space. The anomalous mass density is allowed to vary in both horizontal and vertical directions in a polynomial form of λ =ax^m+by^n+cz^t , where m, n, t are nonnegative integers and a, b, c are coefficients of mass density. First, the singular volume integrals of the gravity anomalies are transformed to regular or weakly singular surface integrals over each polygon of the polyhedral body. Then, in terms of the derived singularity-free analytic formulae of these surface integrals, singularity-free analytic formulae for gravity anomalies of arbitrary polyhedral bodies with horizontal and vertical polynomial density contrasts are obtained. For an arbitrary polyhedron, we successfully derived analytic formulae of the gravity potential and the gravity field in the case of m≤ 1 , n≤ 1 , t≤ 1 , and an analytic formula of the gravity potential in the case of m=n=t=2 . For a rectangular prism, we derive an analytic formula of the gravity potential for m≤ 3 , n≤ 3 and t≤ 3 and closed forms of the gravity field are presented for m≤ 1 , n≤ 1 and t≤ 4 . Besides generalizing previously published closed-form solutions for cases of constant and linear mass density contrasts to higher polynomial order, to our best knowledge, this is the first time that closed-form solutions are presented for the gravitational potential of a general polyhedral body with quadratic density contrast in all

  13. A general purpose nonlinear rigid body mass finite element for application to rotary wing dynamics

    NASA Technical Reports Server (NTRS)

    Hamilton, B. K.; Straub, F. K.; Ruzicka, G. C.

    1991-01-01

    The Second Generation Comprehensive Helicopter Analysis System employs the present formulation of the general-purpose nonlinear rigid body mass finite element, which represents the hub masses, blade tip masses, and pendulum vibration absorbers. The rigid body mass element has six degrees of freedom, and accounts for gravitational as well as dynamic effects. A consequence of deriving the element's equations from various physical principles is that, prior to the transformation which couples the rigid body mass element to the rotor blade finite element, the forces obtained for each element are fundamentally different; this is true notwithstanding the degrees-of-freedom of each element are parameterized using the same coordinates.

  14. Identification of kimberlite bodies in Brazil from a 3D audio-magnetotelluric survey

    NASA Astrophysics Data System (ADS)

    De Lugao, P. P.; Eric, C. D. O.; Loureiro, F. O.; Arantes, P. R.; Pastana, A. F.

    2015-12-01

    We report on a succesfull identification of kimberlite bodies in Brazil through the use of the electromagnetic technique audio-magnetotelluric (AMT). Macnae (1979) writes that "In one large survey in South Africa, electromagnetic (EM) techniques have proven to be remarkably effective in detecting the presence of weathered clays or epiclastic kimberlite contained within the pipes." Full tensor AMT data were acquired at 65 points (stations) in a 3D configuration with frequencies ranging from 10kHz to 1Hz. The survey was located in the NW portion of the Mato Grosso state, Brazil, in na area of thick jungle coverage. During the AMT survey, few outcrops were seen because of the dense forest cover. Usually, the occurrences found were of sand deposits, indicating the occurence of Fazenda Casa Branca and Utiariti Formations and gravel from Salto das Nuvens Formation, widely used in paving trails n this region. In the area of the survey, three main targets were confirmed/identified: Kimberlite Area 1 - a classic kimberlite in the region, with the crater facies with different clasts and distinct size. We noted the occurrence of a red-brown soil and an unusual vegetation in this area. The resistivity model provided confirmed the presence of Kimberlite Area 1 and was used to identify other two areas. Area of Interest 1 - area with atypical vegetation along a trail. There is an excavation that displays soil of white color with several blocks present, there are small quartz crystal agglomerates in these blocks. The resistivity model cleary shows a conductive body here, indicative of the presence of a kimberlite. Area of Interest 2 - the presence of a kimberlite was confirmed, not exactly where the targeted Area 2 was, but the southwest of it. Close to this area, there was a very fine rock and a few blocks of pure silica, probably indicating a kimberlitic intrusion. In summary, the 3D resistivity model in depth obtained from inversion of the AMT data confirmed and identified

  15. Documentation of program AFTBDY to generate coordinate system for 3D after body using body fitted curvilinear coordinates, part 1

    NASA Technical Reports Server (NTRS)

    Kumar, D.

    1980-01-01

    The computer program AFTBDY generates a body fitted curvilinear coordinate system for a wedge curved after body. This wedge curved after body is being used in an experimental program. The coordinate system generated by AFTBDY is used to solve 3D compressible N.S. equations. The coordinate system in the physical plane is a cartesian x,y,z system, whereas, in the transformed plane a rectangular xi, eta, zeta system is used. The coordinate system generated is such that in the transformed plane coordinate spacing in the xi, eta, zeta direction is constant and equal to unity. The physical plane coordinate lines in the different regions are clustered heavily or sparsely depending on the regions where physical quantities to be solved for by the N.S. equations have high or low gradients. The coordinate distribution in the physical plane is such that x stays constant in eta and zeta direction, whereas, z stays constant in xi and eta direction. The desired distribution in x and z is input to the program. Consequently, only the y-coordinate is solved for by the program AFTBDY.

  16. High accuracy multiple scatter modelling for 3D whole body PET.

    PubMed

    Markiewicz, P J; Tamal, M; Julyan, P J; Hastings, D L; Reader, A J

    2007-02-07

    A new technique for modelling multiple-order Compton scatter which uses the absolute probabilities relating the image space to the projection space in 3D whole body PET is presented. The details considered in this work give a valuable insight into the scatter problem, particularly for multiple scatter. Such modelling is advantageous for large attenuating media where scatter is a dominant component of the measured data, and where multiple scatter may dominate the total scatter depending on the energy threshold and object size. The model offers distinct features setting it apart from previous research: (1) specification of the scatter distribution for each voxel based on the transmission data, the physics of Compton scattering and the specification of a given PET system; (2) independence from the true activity distribution; (3) in principle no scaling or iterative process is required to find the distribution; (4) explicit multiple scatter modelling; (5) no scatter subtraction or addition to the forward model when included in the system matrix used with statistical image reconstruction methods; (6) adaptability to many different scatter compensation methods from simple and fast to more sophisticated and therefore slower methods; (7) accuracy equivalent to that of a Monte Carlo model. The scatter model has been validated using Monte Carlo simulation (SimSET).

  17. Development of AN Innovative Three-Dimensional Complete Body Screening Device - 3D-CBS

    NASA Astrophysics Data System (ADS)

    Crosetto, D. B.

    2004-07-01

    This article describes an innovative technological approach that increases the efficiency with which a large number of particles (photons) can be detected and analyzed. The three-dimensional complete body screening (3D-CBS) combines the functional imaging capability of the Positron Emission Tomography (PET) with those of the anatomical imaging capability of Computed Tomography (CT). The novel techniques provide better images in a shorter time with less radiation to the patient. A primary means of accomplishing this is the use of a larger solid angle, but this requires a new electronic technique capable of handling the increased data rate. This technique, combined with an improved and simplified detector assembly, enables executing complex real-time algorithms and allows more efficiently use of economical crystals. These are the principal features of this invention. A good synergy of advanced techniques in particle detection, together with technological progress in industry (latest FPGA technology) and simple, but cost-effective ideas provide a revolutionary invention. This technology enables over 400 times PET efficiency improvement at once compared to two to three times improvements achieved every five years during the past decades. Details of the electronics are provided, including an IBM PC board with a parallel-processing architecture implemented in FPGA, enabling the execution of a programmable complex real-time algorithm for best detection of photons.

  18. Deformable registration for image-guided spine surgery: preserving rigid body vertebral morphology in free-form transformations

    NASA Astrophysics Data System (ADS)

    Reaungamornrat, S.; Wang, A. S.; Uneri, A.; Otake, Y.; Zhao, Z.; Khanna, A. J.; Siewerdsen, J. H.

    2014-03-01

    Purpose: Deformable registration of preoperative and intraoperative images facilitates accurate localization of target and critical anatomy in image-guided spine surgery. However, conventional deformable registration fails to preserve the morphology of rigid bone anatomy and can impart distortions that confound high-precision intervention. We propose a constrained registration method that preserves rigid morphology while allowing deformation of surrounding soft tissues. Method: The registration method aligns preoperative 3D CT to intraoperative cone-beam CT (CBCT) using free-form deformation (FFD) with penalties on rigid body motion imposed according to a simple intensity threshold. The penalties enforced 3 properties of a rigid transformation - namely, constraints on affinity (AC), orthogonality (OC), and properness (PC). The method also incorporated an injectivity constraint (IC) to preserve topology. Physical experiments (involving phantoms, an ovine spine, and a human cadaver) as well as digital simulations were performed to evaluate the sensitivity to registration parameters, preservation of rigid body morphology, and overall registration accuracy of constrained FFD in comparison to conventional unconstrained FFD (denoted uFFD) and Demons registration. Result: FFD with orthogonality and injectivity constraints (denoted FFD+OC+IC) demonstrated improved performance compared to uFFD and Demons. Affinity and properness constraints offered little or no additional improvement. The FFD+OC+IC method preserved rigid body morphology at near-ideal values of zero dilatation (D = 0.05, compared to 0.39 and 0.56 for uFFD and Demons, respectively) and shear (S = 0.08, compared to 0.36 and 0.44 for uFFD and Demons, respectively). Target registration error (TRE) was similarly improved for FFD+OC+IC (0.7 mm), compared to 1.4 and 1.8 mm for uFFD and Demons. Results were validated in human cadaver studies using CT and CBCT images, with FFD+OC+IC providing excellent preservation

  19. Comparison of similarity measures for rigid-body CT/Dual X-ray image registrations.

    PubMed

    Kim, Jinkoo; Li, Shidong; Pradhan, Deepak; Hammoud, Rabih; Chen, Qing; Yin, Fang-Fang; Zhao, Yang; Kim, Jae Ho; Movsas, Benjamin

    2007-08-01

    A set of experiments were conducted to evaluate six similarity measures for intensity-based rigid-body 3D/2D image registration. Similarity measure is an index that measures the similarity between a digitally reconstructed radiograph (DRR) and an x-ray planar image. The registration is accomplished by maximizing the sum of the similarity measures between biplane x-ray images and the corresponding DRRs in an iterative fashion. We have evaluated the accuracy and attraction ranges of the registrations using six different similarity measures on phantom experiments for head, thorax, and pelvis. The images were acquired using Varian Medial System On-Board Imager. Our results indicated that normalized cross correlation and entropy of difference showed a wide attraction range (62 deg and 83 mm mean attraction range, omega(mean)), but the worst accuracy (4.2 mm maximum error, e(max)). The gradient-based similarity measures, gradient correlation and gradient difference, and the pattern intensity showed sub-millimeter accuracy, but narrow attraction ranges (omega(mean)=29 deg, 31 mm). Mutual information was in-between of these two groups (e(max)=2.5 mm, omega(mean)= 48 deg, 52 mm). On the data of 120 x-ray pairs from eight IRB approved prostate patients, the gradient difference showed the best accuracy. In the clinical applications, registrations starting with the mutual information followed by the gradient difference may provide the best accuracy and the most robustness.

  20. Attitude dynamics simulation subroutines for systems of hinge-connected rigid bodies with nonrigid appendages

    NASA Technical Reports Server (NTRS)

    Fleischer, G. E.; Likins, P. W.

    1975-01-01

    Three computer subroutines designed to solve the vector-dyadic differential equations of rotational motion for systems that may be idealized as a collection of hinge-connected rigid bodies assembled in a tree topology, with an optional flexible appendage attached to each body are reported. Deformations of the appendages are mathematically represented by modal coordinates and are assumed small. Within these constraints, the subroutines provide equation solutions for (1) the most general case of unrestricted hinge rotations, with appendage base bodies nominally rotating at a constant speed, (2) the case of unrestricted hinge rotations between rigid bodies, with the restriction that those rigid bodies carrying appendages are nominally nonspinning, and (3) the case of small hinge rotations and nominally nonrotating appendages. Sample problems and their solutions are presented to illustrate the utility of the computer programs.

  1. Rigid Bronchoscopic Removal of Multiple Airway Foreign Bodies

    PubMed Central

    Lano, Charles F.; Holmes, Douglas K.

    1997-01-01

    Despite new equipment, such as the Hopkins rod-lens telescopes and optical forceps, foreign bodies in the airway continue to present a diagnostic and therapeutic challenge to the endoscopist. Airway foreign bodies are more common in children than adults and frequently, the patient may have aspirated more than one foreign body or the original foreign body fragments into pieces. Vegetable matter is the most frequently aspirated material by children. This material can swell as it absorbs water, it can cause an intense mucosal reaction and it can fragment during removal. A case with endoscopic photographs demonstrating these issues and a discussion are presented. PMID:18493458

  2. Determination of a new uniform thorax density representative of the living population from 3D external body shape modeling.

    PubMed

    Amabile, Celia; Choisne, Julie; Nérot, Agathe; Pillet, Hélène; Skalli, Wafa

    2016-05-03

    Body segment parameters (BSP) for each body׳s segment are needed for biomechanical analysis. To provide population-specific BSP, precise estimation of body׳s segments volume and density are needed. Widely used uniform densities, provided by cadavers׳ studies, did not consider the air present in the lungs when determining the thorax density. The purpose of this study was to propose a new uniform thorax density representative of the living population from 3D external body shape modeling. Bi-planar X-ray radiographies were acquired on 58 participants allowing 3D reconstructions of the spine, rib cage and human body shape. Three methods of computing the thorax mass were compared for 48 subjects: (1) the Dempster Uniform Density Method, currently in use for BSPs calculation, using Dempster density data, (2) the Personalized Method using full-description of the thorax based on 3D reconstruction of the rib cage and spine and (3) the Improved Uniform Density Method using a uniform thorax density resulting from the Personalized Method. For 10 participants, comparison was made between the body mass obtained from a force-plate and the body mass computed with each of the three methods. The Dempster Uniform Density Method presented a mean error of 4.8% in the total body mass compared to the force-plate vs 0.2% for the Personalized Method and 0.4% for the Improved Uniform Density Method. The adjusted thorax density found from the 3D reconstruction was 0.74g/cm(3) for men and 0.73g/cm(3) for women instead of the one provided by Dempster (0.92g/cm(3)), leading to a better estimate of the thorax mass and body mass.

  3. Fish body surface data measurement based on 3D digital image correlation

    NASA Astrophysics Data System (ADS)

    Jiang, Ming; Qian, Chen; Yang, Wenkai

    2016-01-01

    To film the moving fish in the glass tank, light will be bent at the interface of air and glass, glass and water. Based on binocular stereo vision and refraction principle, we establish a mathematical model of 3D image correlation to reconstruct the 3D coordinates of samples in the water. Marking speckle in fish surface, a series of real-time speckle images of swimming fish will be obtained by two high-speed cameras, and instantaneous 3D shape, strain, displacement etc. of fish will be reconstructed.

  4. In-body tissue-engineered aortic valve (Biovalve type VII) architecture based on 3D printer molding.

    PubMed

    Nakayama, Yasuhide; Takewa, Yoshiaki; Sumikura, Hirohito; Yamanami, Masashi; Matsui, Yuichi; Oie, Tomonori; Kishimoto, Yuichiro; Arakawa, Mamoru; Ohmuma, Kentaro; Tajikawa, Tsutomu; Kanda, Keiichi; Tatsumi, Eisuke

    2015-01-01

    In-body tissue architecture--a novel and practical regeneration medicine technology--can be used to prepare a completely autologous heart valve, based on the shape of a mold. In this study, a three-dimensional (3D) printer was used to produce the molds. A 3D printer can easily reproduce the 3D-shape and size of native heart valves within several processing hours. For a tri-leaflet, valved conduit with a sinus of Valsalva (Biovalve type VII), the mold was assembled using two conduit parts and three sinus parts produced by the 3D printer. Biovalves were generated from completely autologous connective tissue, containing collagen and fibroblasts, within 2 months following the subcutaneous embedding of the molds (success rate, 27/30). In vitro evaluation, using a pulsatile circulation circuit, showed excellent valvular function with a durability of at least 10 days. Interposed between two expanded polytetrafluoroethylene grafts, the Biovalves (N = 3) were implanted in goats through an apico-aortic bypass procedure. Postoperative echocardiography showed smooth movement of the leaflets with minimal regurgitation under systemic circulation. After 1 month of implantation, smooth white leaflets were observed with minimal thrombus formation. Functional, autologous, 3D-shaped heart valves with clinical application potential were formed following in-body embedding of specially designed molds that were created within several hours by 3D printer.

  5. Machine learning and synthetic aperture refocusing approach for more accurate masking of fish bodies in 3D PIV data

    NASA Astrophysics Data System (ADS)

    Ford, Logan; Bajpayee, Abhishek; Techet, Alexandra

    2015-11-01

    3D particle image velocimetry (PIV) is becoming a popular technique to study biological flows. PIV images that contain fish or other animals around which flow is being studied, need to be appropriately masked in order to remove the animal body from the 3D reconstructed volumes prior to calculating particle displacement vectors. Presented here is a machine learning and synthetic aperture (SA) refocusing based approach for more accurate masking of fish from reconstructed intensity fields for 3D PIV purposes. Using prior knowledge about the 3D shape and appearance of the fish along with SA refocused images at arbitrarily oriented focal planes, the location and orientation of a fish in a reconstructed volume can be accurately determined. Once the location and orientation of a fish in a volume is determined, it can be masked out.

  6. Acceleration analysis of multi-rigid body system and its application for vehicle based stabilized platform system

    NASA Astrophysics Data System (ADS)

    Liu, Xiao; Luo, Erjuan; Jia, Lei; Liu, Bo

    2017-01-01

    The traditional representation of acceleration of a rigid body is given in terms of the angular acceleration and linear acceleration of a point attached to the rigid body. Since this representation has no coordinate invariance, the acceleration transformation of a multi-rigid-body system is complicated. In this paper, the physical meaning of the time derivative of a twist is investigated. It reveals that the rigid-body acceleration comprises the angular acceleration and tangent acceleration of a point which is attached to the rigid body and instantaneously coincident with the origin of frame in use. Their composition presents a six-dimensional representation of the rigid-body acceleration, which is verified to be of coordinate invariance. Based on the representation, the transformation of the rigid-body accelerations is performed conveniently, and the corresponding formula of composition accelerations of one rigid body relative to any other bodies in a multi-rigid-body system is presented. The method is then extended to the application of a vehicle stabilized platform system. The method is verified to be effective by analyzing the virtual prototype of the vehicle-based stabilized platform system. This paper builds a bridge for the six-dimensional rigid-body acceleration from theory achievements to practical application.

  7. Swimming and pumping of rigid helical bodies in viscous fluids

    NASA Astrophysics Data System (ADS)

    Li, Lei; Spagnolie, Saverio E.

    2014-04-01

    Rotating helical bodies of arbitrary cross-sectional profile and infinite length are explored as they swim through or transport a viscous fluid. The Stokes equations are studied in a helical coordinate system, and closed form analytical expressions for the force-free swimming speed and torque are derived in the asymptotic regime of nearly cylindrical bodies. High-order accurate expressions for the velocity field and swimming speed are derived for helical bodies of finite pitch angle through a double series expansion. The analytical predictions match well with the results of full numerical simulations, and accurately predict the optimal pitch angle for a given cross-sectional profile. This work may improve the modeling and design of helical structures used in microfluidic manipulation, synthetic microswimmer engineering, and the transport and mixing of viscous fluids.

  8. Rigid body constraints realized in massively-parallel molecular dynamics on graphics processing units

    NASA Astrophysics Data System (ADS)

    Nguyen, Trung Dac; Phillips, Carolyn L.; Anderson, Joshua A.; Glotzer, Sharon C.

    2011-11-01

    Molecular dynamics (MD) methods compute the trajectory of a system of point particles in response to a potential function by numerically integrating Newton's equations of motion. Extending these basic methods with rigid body constraints enables composite particles with complex shapes such as anisotropic nanoparticles, grains, molecules, and rigid proteins to be modeled. Rigid body constraints are added to the GPU-accelerated MD package, HOOMD-blue, version 0.10.0. The software can now simulate systems of particles, rigid bodies, or mixed systems in microcanonical (NVE), canonical (NVT), and isothermal-isobaric (NPT) ensembles. It can also apply the FIRE energy minimization technique to these systems. In this paper, we detail the massively parallel scheme that implements these algorithms and discuss how our design is tuned for the maximum possible performance. Two different case studies are included to demonstrate the performance attained, patchy spheres and tethered nanorods. In typical cases, HOOMD-blue on a single GTX 480 executes 2.5-3.6 times faster than LAMMPS executing the same simulation on any number of CPU cores in parallel. Simulations with rigid bodies may now be run with larger systems and for longer time scales on a single workstation than was previously even possible on large clusters.

  9. Synthesis of 3D Model of a Magnetic Field-Influenced Body from a Single Image

    NASA Technical Reports Server (NTRS)

    Wang, Cuilan; Newman, Timothy; Gallagher, Dennis

    2006-01-01

    A method for recovery of a 3D model of a cloud-like structure that is in motion and deforming but approximately governed by magnetic field properties is described. The method allows recovery of the model from a single intensity image in which the structure's silhouette can be observed. The method exploits envelope theory and a magnetic field model. Given one intensity image and the segmented silhouette in the image, the method proceeds without human intervention to produce the 3D model. In addition to allowing 3D model synthesis, the method's capability to yield a very compact description offers further utility. Application of the method to several real-world images is demonstrated.

  10. Computing the Free Energy along a Reaction Coordinate Using Rigid Body Dynamics.

    PubMed

    Tao, Peng; Sodt, Alexander J; Shao, Yihan; König, Gerhard; Brooks, Bernard R

    2014-10-14

    The calculations of potential of mean force along complex chemical reactions or rare events pathways are of great interest because of their importance for many areas in chemistry, molecular biology, and material science. The major difficulty for free energy calculations comes from the great computational cost for adequate sampling of the system in high-energy regions, especially close to the reaction transition state. Here, we present a method, called FEG-RBD, in which the free energy gradients were obtained from rigid body dynamics simulations. Then the free energy gradients were integrated along a reference reaction pathway to calculate free energy profiles. In a given system, the reaction coordinates defining a subset of atoms (e.g., a solute, or the quantum mechanics (QM) region of a quantum mechanics/molecular mechanics simulation) are selected to form a rigid body during the simulation. The first-order derivatives (gradients) of the free energy with respect to the reaction coordinates are obtained through the integration of constraint forces within the rigid body. Each structure along the reference reaction path is separately subjected to such a rigid body simulation. The individual free energy gradients are integrated along the reference pathway to obtain the free energy profile. Test cases provided demonstrate both the strengths and weaknesses of the FEG-RBD method. The most significant benefit of this method comes from the fast convergence rate of the free energy gradient using rigid-body constraints instead of restraints. A correction to the free energy due to approximate relaxation of the rigid-body constraint is estimated and discussed. A comparison with umbrella sampling using a simple test case revealed the improved sampling efficiency of FEG-RBD by a factor of 4 on average. The enhanced efficiency makes this method effective for calculating the free energy of complex chemical reactions when the reaction coordinate can be unambiguously defined by a

  11. Rigid body dynamics in non-Euclidean spaces

    NASA Astrophysics Data System (ADS)

    Borisov, A. V.; Mamaev, I. S.

    2016-10-01

    In this paper, we focus on the study of two-dimensional plate dynamics on the Lobachevskii plane L 2. First of all, we consider the free motion of such a plate, which is a pseudospherical analog of dynamics of the Euler top, and also present an analog of the Euler-Poisson equations enabling us to study the motion of the body in potential force fields having rotational symmetry. We present a series of integrable cases, having analogs in Euclidean space, for different fields. Moreover, in the paper, a partial qualitative analysis of the dynamics of free motion of a plate under arbitrary initial conditions is made and a number of computer illustrations are presented which show a substantial difference of the motion from the case of Euclidean space. The study undertaken in the present paper leads to interesting physical consequences, which enable us to detect the influence of curvature on the body dynamics.

  12. Comparison of 2D and 3D qualitative whole body positron emission tomography (PET) without attenuation or scatter correction

    SciTech Connect

    Kohlmyer, S.G.; Mankoff, D.A.; Lewellen, T.K.; Kaplan, M.S.

    1996-12-31

    The increased sensitivity of 3D PET reduces image noise but can also result in a loss of contrast due to higher scatter fractions. Phantom studies were performed to compare tumor detectability in 2D and 3D qualitative whole body PET without scatter or attenuation correction. Lesion detectability was defined as: detectability = contrast/noise = (-) / {sigma}liver, where and are the average of lesion and liver regions of interest (ROIs), respectively. Liver, heart, and soft tissue sections of a Data Spectrum torso phantom containing a Teflon spine insert were filled with F-18 to match relative concentrations found in clinical FDG studies. Spherical lesions of 1.2 and 2.2 cm diameter were placed in the liver with a lesion to liver activity concentration ratio of 2 : 1. Resulting 2D and 3D images were compared for equivalent whole body acquisition times. Circular ROIs, half the diameter of the lesions, were placed on the tumors and the surrounding background. Background ROIs were normalized to account for the spatially variant bias caused by the absence of the scatter and attenuation corrections. Detectability was greater in the 3D images over the range of count densities and lesion sizes studied, although the difference in detectability between 2D and 3D decreases with decreasing lesion size. These results suggest that 3D imaging is preferable to 2D imaging for clinical qualitative whole body scanning without scatter or attenuation correction. Further studies representing a larger range of clinical applications are required.

  13. A comparative study of velocity increment generation between the rigid body and flexible models of MMET

    SciTech Connect

    Ismail, Norilmi Amilia

    2016-02-01

    The motorized momentum exchange tether (MMET) is capable of generating useful velocity increments through spin–orbit coupling. This study presents a comparative study of the velocity increments between the rigid body and flexible models of MMET. The equations of motions of both models in the time domain are transformed into a function of true anomaly. The equations of motion are integrated, and the responses in terms of the velocity increment of the rigid body and flexible models are compared and analysed. Results show that the initial conditions, eccentricity, and flexibility of the tether have significant effects on the velocity increments of the tether.

  14. VIRO 3D: fast three-dimensional full-body scanning for humans and other living objects

    NASA Astrophysics Data System (ADS)

    Stein, Norbert; Minge, Bernhard

    1998-03-01

    The development of a family of partial and whole body scanners provides a complete technology for fully three-dimensional and contact-free scans on human bodies or other living objects within seconds. This paper gives insight into the design and the functional principles of the whole body scanner VIRO 3D operating on the basis of the laser split-beam method. The arrangement of up to 24 camera/laser combinations, thus dividing the area into different camera fields and an all- around sensor configuration travelling in vertical direction allow the complete 360-degree-scan of an object within 6 - 20 seconds. Due to a special calibration process the different sensors are matched and the measured data are combined. Up to 10 million 3D measuring points with a resolution of approximately 1 mm are processed in all coordinate axes to generate a 3D model. By means of high-performance processors in combination with real-time image processing chips the image data from almost any number of sensors can be recorded and evaluated synchronously in video real-time. VIRO 3D scanning systems have already been successfully implemented in various applications and will open up new perspectives in different other fields, ranging from industry, orthopaedic medicine, plastic surgery to art and photography.

  15. Aquatic turning performance of painted turtles (Chrysemys picta) and functional consequences of a rigid body design.

    PubMed

    Rivera, Gabriel; Rivera, Angela R V; Dougherty, Erin E; Blob, Richard W

    2006-11-01

    The ability to capture prey and avoid predation in aquatic habitats depends strongly on the ability to perform unsteady maneuvers (e.g. turns), which itself depends strongly on body flexibility. Two previous studies of turning performance in rigid-bodied taxa have found either high maneuverability or high agility, but not both. However, examinations of aquatic turning performance in rigid-bodied animals have had limited taxonomic scope and, as such, the effects of many body shapes and designs on aquatic maneuverability and agility have yet to be examined. Turtles represent the oldest extant lineage of rigid-bodied vertebrates and the only aquatic rigid-bodied tetrapods. We evaluated the aquatic turning performance of painted turtles, Chrysemys picta (Schneider, 1783) using the minimum length-specific radius of the turning path (R/L) and the average turning rate (omega(avg)) as measures of maneuverability and agility, respectively. We filmed turtles conducting forward and backward turns in an aquatic arena. Each type of turn was executed using a different pattern of limb movements. During forward turns, turtles consistently protracted the inboard forelimb and held it stationary into the flow, while continuing to move the outboard forelimb and both hindlimbs as in rectilinear swimming. The limb movements of backward turns were more complex than those of forward turns, but involved near simultaneous retraction and protraction of contralateral fore- and hindlimbs, respectively. Forward turns had a minimum R/L of 0.0018 (the second single lowest value reported from any animal) and a maximum omega(avg) of 247.1 degrees. Values of R/L for backward turns (0.0091-0.0950 L) were much less variable than that of forward turns (0.0018-1.0442 L). The maneuverability of turtles is similar to that recorded previously for rigid-bodied boxfish. However, several morphological features of turtles (e.g. shell morphology and limb position) appear to increase agility relative to the body

  16. Modularization and Validation of FUN3D as a CREATE-AV Helios Near-Body Solver

    NASA Technical Reports Server (NTRS)

    Jain, Rohit; Biedron, Robert T.; Jones, William T.; Lee-Rausch, Elizabeth M.

    2016-01-01

    Under a recent collaborative effort between the US Army Aeroflightdynamics Directorate (AFDD) and NASA Langley, NASA's general unstructured CFD solver, FUN3D, was modularized as a CREATE-AV Helios near-body unstructured grid solver. The strategies adopted in Helios/FUN3D integration effort are described. A validation study of the new capability is performed for rotorcraft cases spanning hover prediction, airloads prediction, coupling with computational structural dynamics, counter-rotating dual-rotor configurations, and free-flight trim. The integration of FUN3D, along with the previously integrated NASA OVERFLOW solver, lays the ground for future interaction opportunities where capabilities of one component could be leveraged with those of others in a relatively seamless fashion within CREATE-AV Helios.

  17. Explaining rigid dieting in normal-weight women: the key role of body image inflexibility.

    PubMed

    Ferreira, Cláudia; Trindade, Inês A; Martinho, Ana

    2016-03-01

    Restrictive dieting is an increasing behavior presented by women in modern societies, independently of their weight. There are several known factors that motivate diet, namely a sense of dissatisfaction with one's body and unfavorable social comparisons based on physical appearance. However, dieting seems to have a paradoxical effect and has been considered a risk factor for weight gain and obesity in women and for maladaptive eating. Nevertheless, the study of the emotional regulation processes that explain the adoption of inflexible and rigid eating behaviors still remains little explored. In this line, the present study aims to explore why normal-weight women engage in highly rigid and inflexible diets. We hypothesize that body and weight dissatisfaction and unfavorable social comparisons based on physical appearance explain the adoption of inflexible eating rules, through the mechanisms of body image inflexibility. The current study comprised 508 normal-weight female college students. Path analyses were conducted to explore the study's hypotheses. Results revealed that the model explained 43 % of inflexible eating and revealed excellent fit indices. Furthermore, the unwillingness to experience unwanted events related to body image (body image inflexibility) mediated the impact of body dissatisfaction and unfavorable social comparisons on the adoption of inflexible eating rules. This study highlights the relevance of body image inflexibility to explain rigid eating attitudes, and it seems to be an important avenue for the development of interventions focusing on the promotion of adaptive attitudes towards body image and eating in young women.

  18. Compliant mechanism road bicycle brake: a rigid-body replacement case study

    SciTech Connect

    Olsen, Brian M; Howell, Larry L; Magleby, Spencer P

    2011-01-19

    The design of high-performance bicycle brakes is complicated by the competing design objectives of increased performance and low weight. But this challenge also provides a good case study to demonstrate the design of compliant mechanisms to replace current rigid-link mechanisms. This paper briefly reviews current road brake designs, demonstrates the use of rigid-body replacement synthesis to design a compliant mechanism, and illustrates the combination of compliant mechanism design tools. The resulting concept was generated from the modified dual-pivot brake design and is a partially compliant mechanism where one pin has the dual role of a joint and a mounting pin. The pseudo-rigid-body model, finite element analysis, and optimization algorithms are used to generate design dimensions, and designs are considered for both titanium and E-glass flexures. The resulting design has the potential of reducing the part count and overall weight while maintaining a performance similar to the benchmark.

  19. Influence of 3D Teleseismic Body Waves in the Finite-Fault Source Inversion of Subduction Earthquakes

    NASA Astrophysics Data System (ADS)

    Sladen, A.; Monteiller, V.

    2014-12-01

    Most large earthquakes are generated in subduction zones. To study the complexity of these events, teleseismic body waves offer many advantages over other types of data: they allow to study both the temporal and spatial evolution of slip during the rupture, they don't depend on the presence of nearby land and they allow to study earthquakes regardless of their location. Since the development of teleseismic finite-fault inversion in the 1980th, teleseismic body waves have been simulated using 1D velocity models to take into account propagation effects at the source. Yet, subduction zones are known to be highly heterogeneous: they are characterized by curved and dipping structures, strong seismic velocity contrasts, strong variations of topography and height of the water column. The main reason for relying on a 1D approximation is the computational cost of 3D simulations. And while forward simulations of teleseismic waves in a 3D Earth are only starting to be tractable on modern computers at the frequency range of interest (0.1Hz or shorter), finite-fault source studies require a large number of these simulations. In this work, we present a new and efficient approach to compute 3D teleseismic body waves, in which the full 3D propagation is only computed in a regional domain using discontinuous Galerkin finite-element method, while the rest of the seismic wave field is propagated in a background axisymmetric Earth. The regional and global wave fields are matched using the so-called Total-Field/Scattered-Field technique. This new simulation approach allows us to study the waveform complexities resulting from 3D propagation and investigate how they could improve the resolution and reduce the non-uniqueness of finite-fault inversions.

  20. Matrix Rigidity-Modulated Cardiovascular Organoid Formation from Embryoid Bodies

    PubMed Central

    Shkumatov, Artem; Baek, Kwanghyun; Kong, Hyunjoon

    2014-01-01

    Stem cell clusters, such as embryoid bodies (EBs) derived from embryonic stem cells, are extensively studied for creation of multicellular clusters and complex functional tissues. It is common to control phenotypes of ES cells with varying molecular compounds; however, there is still a need to improve the controllability of cell differentiation, and thus, the quality of created tissue. This study demonstrates a simple but effective strategy to promote formation of vascularized cardiac muscle - like tissue in EBs and form contracting cardiovascular organoids by modulating the stiffness of a cell adherent hydrogel. Using collagen-conjugated polyacrylamide hydrogels with controlled elastic moduli, we discovered that cellular organization in a form of vascularized cardiac muscle sheet was maximal on the gel with the stiffness similar to cardiac muscle. We envisage that the results of this study will greatly contribute to better understanding of emergent behavior of stem cells in developmental and regeneration process and will also expedite translation of EB studies to drug-screening device assembly and clinical treatments. PMID:24732893

  1. A penalty immersed boundary method for a rigid body in fluid

    NASA Astrophysics Data System (ADS)

    Kim, Yongsam; Peskin, Charles S.

    2016-03-01

    We extend the penalty immersed boundary (pIB) method to the interaction between a rigid body and a surrounding fluid. The pIB method is based on the idea of splitting an immersed boundary, which here is a rigid body, notionally into two Lagrangian components: one is a massive component carrying all mass of the rigid body and the other is massless. These two components are connected by a system of stiff springs with 0 rest length. The massless component interacts with the surrounding fluid: it moves at the local fluid velocity and exerts force locally on the fluid. The massive component has no direct interaction with the surrounding fluid and behaves as though in a vacuum, following the dynamics of a rigid body, in which the acting forces and torques are generated from the system of stiff springs that connects the two Lagrangian components. We verify the pIB method by computing the drag coefficients of a cylinder and ball descending though a fluid under the influence of gravity and also by studying the interaction of two such descending cylinders and likewise the interaction of two such descending balls. The computational results are quite comparable to those in the literature. As a further example of an application, we include a freely falling maple seed with autorotation.

  2. Lorentz Contraction, Bell's Spaceships and Rigid Body Motion in Special Relativity

    ERIC Educational Resources Information Center

    Franklin, Jerrold

    2010-01-01

    The meaning of Lorentz contraction in special relativity and its connection with Bell's spaceships parable is discussed. The motion of Bell's spaceships is then compared with the accelerated motion of a rigid body. We have tried to write this in a simple form that could be used to correct students' misconceptions due to conflicting earlier…

  3. Planar dynamics of a uniform beam with rigid bodies affixed to the ends

    NASA Technical Reports Server (NTRS)

    Storch, J.; Gates, S.

    1983-01-01

    The planar dynamics of a uniform elastic beam subject to a variety of geometric and natural boundary conditions and external excitations were analyzed. The beams are inextensible and capable of small transverse bending deformations only. Classical beam vibration eigenvalue problems for a cantilever with tip mass, a cantilever with tip body and an unconstrained beam with rigid bodies at each are examined. The characteristic equations, eigenfunctions and orthogonality relations for each are derived. The forced vibration of a cantilever with tip body subject to base acceleration is analyzed. The exact solution of the governing nonhomogeneous partial differential equation with time dependent boundary conditions is presented and compared with a Rayleigh-Ritz approximate solution. The arbitrary planar motion of an elastic beam with rigid bodies at the ends is addressed. Equations of motion are derived for two modal expansions of the beam deflection. The motion equations are cast in a first order form suitable for numerical integration. Selected FORTRAN programs are provided.

  4. 3D non-linear inversion of magnetic anomalies caused by prismatic bodies using differential evolution algorithm

    NASA Astrophysics Data System (ADS)

    Balkaya, Çağlayan; Ekinci, Yunus Levent; Göktürkler, Gökhan; Turan, Seçil

    2017-01-01

    3D non-linear inversion of total field magnetic anomalies caused by vertical-sided prismatic bodies has been achieved by differential evolution (DE), which is one of the population-based evolutionary algorithms. We have demonstrated the efficiency of the algorithm on both synthetic and field magnetic anomalies by estimating horizontal distances from the origin in both north and east directions, depths to the top and bottom of the bodies, inclination and declination angles of the magnetization, and intensity of magnetization of the causative bodies. In the synthetic anomaly case, we have considered both noise-free and noisy data sets due to two vertical-sided prismatic bodies in a non-magnetic medium. For the field case, airborne magnetic anomalies originated from intrusive granitoids at the eastern part of the Biga Peninsula (NW Turkey) which is composed of various kinds of sedimentary, metamorphic and igneous rocks, have been inverted and interpreted. Since the granitoids are the outcropped rocks in the field, the estimations for the top depths of two prisms representing the magnetic bodies were excluded during inversion studies. Estimated bottom depths are in good agreement with the ones obtained by a different approach based on 3D modelling of pseudogravity anomalies. Accuracy of the estimated parameters from both cases has been also investigated via probability density functions. Based on the tests in the present study, it can be concluded that DE is a useful tool for the parameter estimation of source bodies using magnetic anomalies.

  5. 3-D Human body models in C.A.D. : Anthropometric Aspects

    NASA Astrophysics Data System (ADS)

    Renaud, C.; Steck, R.; Pineau, J. C.

    1986-07-01

    Modeling and simulation methods of man-machine systems are developed at the laboratory by interactive infography and C.A.D. technics. In order to better apprehend the morphological variability of populations we have enriched the 3-D model with a parametric function using classical anthropometric dimensions. We have selected reference, associate and complementary dimensions : lengths, breadths, circumferences and depths, which depend on operator's tasks and characteristics of workplaces. All anthropometric values come from the International Data Bank of Human Biometry of ERGODATA System. The utilization of the parametric function brings a quick and accurate description of morphology for theoretic subjects and can be used in C.A.D. analysis.

  6. Coupled motion of rigid bodies about their center of mass. [Shuttle/payload system

    NASA Technical Reports Server (NTRS)

    Jezewski, D. J.; Donaldson, J. D.

    1979-01-01

    Nontrivial analytical solutions for the coupled motion of two rigid bodies about their center of mass are obtained on the assumptions that the rigid bodies are coupled by a massless rigid boom and that no external forces are acting on the system. Both relative rotational and translational motions of the two bodies are considered. General equations of motion are derived by regarding the two bodies as consisting of two distinct systems of particles and by applying the principle of conservation of angular momentum. It is shown that a basic nontrivial solution can be obtained for the translational problem if an assumption is made concerning the relative orientation of one principal axis of inertia of each body and that fundamental nontrivial solutions are readily obtained for the rotational problem if an additional assumption is made with respect to the symmetry of one body. Certain stability criteria are found for some of these motions by defining regions of constraint for the relative translational and rotational elements.

  7. A virtual interface for interactions with 3D models of the human body.

    PubMed

    De Paolis, Lucio T; Pulimeno, Marco; Aloisio, Giovanni

    2009-01-01

    The developed system is the first prototype of a virtual interface designed to avoid contact with the computer so that the surgeon is able to visualize 3D models of the patient's organs more effectively during surgical procedure or to use this in the pre-operative planning. The doctor will be able to rotate, to translate and to zoom in on 3D models of the patient's organs simply by moving his finger in free space; in addition, it is possible to choose to visualize all of the organs or only some of them. All of the interactions with the models happen in real-time using the virtual interface which appears as a touch-screen suspended in free space in a position chosen by the user when the application is started up. Finger movements are detected by means of an optical tracking system and are used to simulate touch with the interface and to interact by pressing the buttons present on the virtual screen.

  8. Dynamic analysis of a system of hinge-connected rigid bodies with nonrigid appendages. [equations of motion

    NASA Technical Reports Server (NTRS)

    Likins, P. W.

    1974-01-01

    Equations of motion are derived for use in simulating a spacecraft or other complex electromechanical system amenable to idealization as a set of hinge-connected rigid bodies of tree topology, with rigid axisymmetric rotors and nonrigid appendages attached to each rigid body in the set. In conjunction with a previously published report on finite-element appendage vibration equations, this report provides a complete minimum-dimension formulation suitable for generic programming for digital computer numerical integration.

  9. Investigating the accuracy of microstereotactic-body-radiotherapy utilizing anatomically accurate 3D printed rodent-morphic dosimeters

    PubMed Central

    Bache, Steven T.; Juang, Titania; Belley, Matthew D.; Koontz, Bridget F.; Adamovics, John; Yoshizumi, Terry T.; Kirsch, David G.; Oldham, Mark

    2015-01-01

    Purpose: Sophisticated small animal irradiators, incorporating cone-beam-CT image-guidance, have recently been developed which enable exploration of the efficacy of advanced radiation treatments in the preclinical setting. Microstereotactic-body-radiation-therapy (microSBRT) is one technique of interest, utilizing field sizes in the range of 1–15 mm. Verification of the accuracy of microSBRT treatment delivery is challenging due to the lack of available methods to comprehensively measure dose distributions in representative phantoms with sufficiently high spatial resolution and in 3 dimensions (3D). This work introduces a potential solution in the form of anatomically accurate rodent-morphic 3D dosimeters compatible with ultrahigh resolution (0.3 mm3) optical computed tomography (optical-CT) dose read-out. Methods: Rodent-morphic dosimeters were produced by 3D-printing molds of rodent anatomy directly from contours defined on x-ray CT data sets of rats and mice, and using these molds to create tissue-equivalent radiochromic 3D dosimeters from Presage. Anatomically accurate spines were incorporated into some dosimeters, by first 3D printing the spine mold, then forming a high-Z bone equivalent spine insert. This spine insert was then set inside the tissue equivalent body mold. The high-Z spinal insert enabled representative cone-beam CT IGRT targeting. On irradiation, a linear radiochromic change in optical-density occurs in the dosimeter, which is proportional to absorbed dose, and was read out using optical-CT in high-resolution (0.5 mm isotropic voxels). Optical-CT data were converted to absolute dose in two ways: (i) using a calibration curve derived from other Presage dosimeters from the same batch, and (ii) by independent measurement of calibrated dose at a point using a novel detector comprised of a yttrium oxide based nanocrystalline scintillator, with a submillimeter active length. A microSBRT spinal treatment was delivered consisting of a 180

  10. Investigating the accuracy of microstereotactic-body-radiotherapy utilizing anatomically accurate 3D printed rodent-morphic dosimeters

    SciTech Connect

    Bache, Steven T.; Juang, Titania; Belley, Matthew D.; Koontz, Bridget F.; Yoshizumi, Terry T.; Kirsch, David G.; Oldham, Mark; Adamovics, John

    2015-02-15

    Purpose: Sophisticated small animal irradiators, incorporating cone-beam-CT image-guidance, have recently been developed which enable exploration of the efficacy of advanced radiation treatments in the preclinical setting. Microstereotactic-body-radiation-therapy (microSBRT) is one technique of interest, utilizing field sizes in the range of 1–15 mm. Verification of the accuracy of microSBRT treatment delivery is challenging due to the lack of available methods to comprehensively measure dose distributions in representative phantoms with sufficiently high spatial resolution and in 3 dimensions (3D). This work introduces a potential solution in the form of anatomically accurate rodent-morphic 3D dosimeters compatible with ultrahigh resolution (0.3 mm{sup 3}) optical computed tomography (optical-CT) dose read-out. Methods: Rodent-morphic dosimeters were produced by 3D-printing molds of rodent anatomy directly from contours defined on x-ray CT data sets of rats and mice, and using these molds to create tissue-equivalent radiochromic 3D dosimeters from Presage. Anatomically accurate spines were incorporated into some dosimeters, by first 3D printing the spine mold, then forming a high-Z bone equivalent spine insert. This spine insert was then set inside the tissue equivalent body mold. The high-Z spinal insert enabled representative cone-beam CT IGRT targeting. On irradiation, a linear radiochromic change in optical-density occurs in the dosimeter, which is proportional to absorbed dose, and was read out using optical-CT in high-resolution (0.5 mm isotropic voxels). Optical-CT data were converted to absolute dose in two ways: (i) using a calibration curve derived from other Presage dosimeters from the same batch, and (ii) by independent measurement of calibrated dose at a point using a novel detector comprised of a yttrium oxide based nanocrystalline scintillator, with a submillimeter active length. A microSBRT spinal treatment was delivered consisting of a 180

  11. Progress Toward Overset-Grid Moving Body Capability for USM3D Unstructured Flow Solver

    NASA Technical Reports Server (NTRS)

    Pandyna, Mohagna J.; Frink, Neal T.; Noack, Ralph W.

    2005-01-01

    A static and dynamic Chimera overset-grid capability is added to an established NASA tetrahedral unstructured parallel Navier-Stokes flow solver, USM3D. Modifications to the solver primarily consist of a few strategic calls to the Donor interpolation Receptor Transaction library (DiRTlib) to facilitate communication of solution information between various grids. The assembly of multiple overlapping grids into a single-zone composite grid is performed by the Structured, Unstructured and Generalized Grid AssembleR (SUGGAR) code. Several test cases are presented to verify the implementation, assess overset-grid solution accuracy and convergence relative to single-grid solutions, and demonstrate the prescribed relative grid motion capability.

  12. Modular optical topometric sensor for 3D acquisition of human body surfaces and long-term monitoring of variations.

    PubMed

    Bischoff, Guido; Böröcz, Zoltan; Proll, Christian; Kleinheinz, Johannes; von Bally, Gert; Dirksen, Dieter

    2007-08-01

    Optical topometric 3D sensors such as laser scanners and fringe projection systems allow detailed digital acquisition of human body surfaces. For many medical applications, however, not only the current shape is important, but also its changes, e.g., in the course of surgical treatment. In such cases, time delays of several months between subsequent measurements frequently occur. A modular 3D coordinate measuring system based on the fringe projection technique is presented that allows 3D coordinate acquisition including calibrated color information, as well as the detection and visualization of deviations between subsequent measurements. In addition, parameters describing the symmetry of body structures are determined. The quantitative results of the analysis may be used as a basis for objective documentation of surgical therapy. The system is designed in a modular way, and thus, depending on the object of investigation, two or three cameras with different capabilities in terms of resolution and color reproduction can be utilized to optimize the set-up.

  13. Effect of sitting, standing, and supine body positions on facial soft tissue: detailed 3D analysis.

    PubMed

    Ozsoy, U; Sekerci, R; Ogut, E

    2015-10-01

    Medical imaging techniques require various body positions. Gravity causes changes in the facial soft tissue and acts in different directions according to the position of the head during imaging. The aim of this study was to evaluate the effect of positional changes on the facial soft tissue. The faces of subjects were scanned in the standing, sitting, and supine body positions. Differences in the positions were compared using the root mean square (RMS), mean absolute deviation (MAD), and mean signed distance (MSD). The displacement of 15 midsagittal and 20 bilateral landmarks was evaluated. The RMS, MAD, and MSD values of the sitting-standing comparison were significantly lower than those of the sitting-supine and standing-supine comparisons. There were no significant differences between the sitting-supine and standing-supine comparisons. Sixteen out of 135 measurements (12%) of the midsagittal landmarks and 94 out of 180 (52%) measurements of the bilateral landmarks showed significant displacements among the body positions. These results demonstrate a significant change in the facial soft tissue caused by body position. Furthermore, these data show the different susceptibilities of the facial soft tissue landmarks to the effect of body position along the x, y, and z axes.

  14. The Rufous Hummingbird in hovering flight -- full-body 3D immersed boundary simulation

    NASA Astrophysics Data System (ADS)

    Ferreira de Sousa, Paulo; Luo, Haoxiang; Bocanegra Evans, Humberto

    2009-11-01

    Hummingbirds are an interesting case study for the development of micro-air vehicles since they combine the high flight stability of insects with the low metabolic power per unit of body mass of bats, during hovering flight. In this study, simulations of a full-body hummingbird in hovering flight were performed at a Reynolds number around 3600. The simulations employ a versatile sharp-interface immersed boundary method recently enhanced at our lab that can treat thin membranes and solid bodies alike. Implemented on a Cartesian mesh, the numerical method allows us to capture the vortex dynamics of the wake accurately and efficiently. The whole-body simulation will allow us to clearly identify the three general patterns of flow velocity around the body of the hummingbird referred in Altshuler et al. (Exp Fluids 46 (5), 2009). One focus of the current study is to understand the interaction between the wakes of the two wings at the end of the upstroke, and how the tail actively defects the flow to contribute to pitch stability. Another focus of the study will be to identify the pair of unconnected loops underneath each wing.

  15. Physics-based Simulation of Human Posture Using 3D Whole Body Scanning Technology for Astronaut Space Suit Evaluation

    NASA Technical Reports Server (NTRS)

    Kim, Kyu-Jung

    2005-01-01

    Over the past few years high precision three-dimensional (3D) full body laser scanners have been developed to be used as a powerful anthropometry tool for quantification of the morphology of the human body. The full body scanner can quickly extract body characteristics in non-contact fashion. It is required for the Anthropometry and Biomechanics Facility (ABF) to have capabilities for kinematics simulation of a digital human at various postures whereas the laser scanner only allows capturing a single static posture at each time. During this summer fellowship period a theoretical study has been conducted to estimate an arbitrary posture with a series of example postures through finite element (FE) approximation and found that four-point isoparametric FE approximation would result in reasonable maximum position errors less than 5%. Subsequent pilot scan experiments demonstrated that a bead marker with a nominal size of 6 mm could be used as a marker for digitizing 3-D coordinates of anatomical landmarks for further kinematic analysis. Two sessions of human subject testing were conducted for reconstruction of an arbitrary postures from a set of example postures for each joint motion for the forearm/hand complex and the whole upper extremity.

  16. On the photogravitational R4BP when the third primary is a triaxial rigid body

    NASA Astrophysics Data System (ADS)

    Asique, Md Chand; Prasad, Umakant; Hassan, M. R.; Suraj, Md Sanam

    2016-12-01

    The present paper deals with the photogravitational restricted four-body problem, when the third primary is placed at the triangular libration point of the restricted three-body problem is a triaxial rigid body. The third primary m3 is not influencing the motion of the dominating primaries m1 and m2. We have studied the motion of m4, moving under the influence of the three primaries mi, i=1,2,3, but the motion of the primaries is not being influenced by infinitesimal mass m4. The aim of this study is to find the locations of equilibrium points and discuss their stability. We have obtained six non-collinear equilibrium points near the third body when the third body is a triaxial rigid body and a source of radiation. There exist at most ten non-collinear equilibrium points in total for this problem. However, the number of equilibrium points depends on the triaxiality parameters. Further, we have drawn the zero velocity surfaces to determine the possible allowed boundary regions. The stability of non-collinear equilibrium points for different mass parameters, radiation parameters and triaxiality of the third body is also studied. The stability regions of the equilibrium points were expanded due to the triaxiality of the third body and various values of the radiation parameter q.

  17. Almost global finite-time stabilization of rigid body attitude motion

    NASA Astrophysics Data System (ADS)

    Bohn, Jan

    This dissertation considers continuous finite-time stabilization of rigid body attitude dynamics using a coordinate-free representation of attitude on the Lie group of rigid body rotations in three dimensions, SO(3). First a general methodology to construct control Lyapunov functions that are Holder continuous and that can be used to show finite-time stability of the feedback controlled system, is presented. The dynamics is represented by generalized (local) coordinates. This methodology is then extended, using a Holder continuous Morse-Lyapunov function, to obtain a finite-time feedback stabilization scheme for rigid body attitude motion to a desired attitude with continuous state feedback. The feedback control law designed here leads to almost global finite-time stabilization of the attitude motion of a rigid body with Holder continuous feedback, to the desired attitude. Furthermore, using the finite-time feedback stabilization scheme, a state observer is proposed for rigid body attitude motion with a given attitude dynamics model that in the absence of measurement noise and disturbance torques leads to almost global finite-time stable convergence of attitude motion state estimates to the actual states for a rigid body whose inertia is known. Subsequently this state observer is combined with a deterministic filter scheme that utilizes a set of sigma points obtained from the unscented transform based on exponential coordinates. This estimation scheme uses discrete-time state measurements of inertially known vectors along with rate gyro measurements of the angular velocity, to obtain state estimates in the filtering stage. Additionally, a set of sigma points is obtained from the unscented transform, with re-sampling centered at the current state estimate at each measurement instant. The state estimates along with sampled sigma points are propagated between measurement instants, using the discrete-time attitude state observer that is almost globally finite

  18. Rigid Bronchoscopy in Airway Foreign Bodies: Value of the Clinical and Radiological Signs

    PubMed Central

    Acharya, Kunjan

    2016-01-01

    Introduction  Foreign body in airway is a common emergency in ENT practice. As we know, Rigid Bronchoscopy is the method of choice for removing it, although at times it leads to specialists performing unnecessary bronchoscopy, exposing patients to hazards of general anesthesia. Objective  The objective of my study is to calculate sensitivity, specificity, positive predictive value, odds ratio from the clinical and radiological signs, comparing with the gold standard, the rigid bronchoscope procedure. Method  This is a prospective analytical study designed at University Teaching Hospital and conducted over a period of 18 months, from March 2011 to August 2012. Data collection was broadly classified into three different categories: (1) Symptomatology, such as presence or absence of choking, cyanosis, and difficulty in breathing; (2) Clinical signs, such as the presence or absence of air entry, crackles, and rhonchi 3. Chest X-ray findings were suggestive of a foreign body. Results  There were a total of 40 rigid bronchoscopies performed under general anesthesia for the diagnosis and therapeutic reasons. Among 40 patients who underwent rigid bronchoscopy, 32 (80%) were found to have varieties of foreign bodies in their airway while 8 patients (20%) had negative bronchoscopy. The history of choking is the only clinical symptoms which came out to be statistically Significant (p = 0.043) with odds ratio of 5. Conclusion  Rigid bronchoscopy is the gold standard technique for diagnosis and procedure of choice to remove FB from airway. Regardless, it still presents a small chance of negative result, especially when there is no history of aspiration. PMID:27413398

  19. Evaluation of Rigid-Body Motion Compensation in Cardiac Perfusion SPECT Employing Polar-Map Quantification.

    PubMed

    Pretorius, P Hendrik; Johnson, Karen L; King, Michael A

    2016-06-01

    We have recently been successful in the development and testing of rigid-body motion tracking, estimation and compensation for cardiac perfusion SPECT based on a visual tracking system (VTS). The goal of this study was to evaluate in patients the effectiveness of our rigid-body motion compensation strategy. Sixty-four patient volunteers were asked to remain motionless or execute some predefined body motion during an additional second stress perfusion acquisition. Acquisitions were performed using the standard clinical protocol with 64 projections acquired through 180 degrees. All data were reconstructed with an ordered-subsets expectation-maximization (OSEM) algorithm using 4 projections per subset and 5 iterations. All physical degradation factors were addressed (attenuation, scatter, and distance dependent resolution), while a 3-dimensional Gaussian rotator was used during reconstruction to correct for six-degree-of-freedom (6-DOF) rigid-body motion estimated by the VTS. Polar map quantification was employed to evaluate compensation techniques. In 54.7% of the uncorrected second stress studies there was a statistically significant difference in the polar maps, and in 45.3% this made a difference in the interpretation of segmental perfusion. Motion correction reduced the impact of motion such that with it 32.8 % of the polar maps were statistically significantly different, and in 14.1% this difference changed the interpretation of segmental perfusion. The improvement shown in polar map quantitation translated to visually improved uniformity of the SPECT slices.

  20. Utilization of 3D imaging flash lidar technology for autonomous safe landing on planetary bodies

    NASA Astrophysics Data System (ADS)

    Amzajerdian, Farzin; Vanek, Michael; Petway, Larry; Pierrottet, Diego; Busch, George; Bulyshev, Alexander

    2010-01-01

    NASA considers Flash Lidar a critical technology for enabling autonomous safe landing of future large robotic and crewed vehicles on the surface of the Moon and Mars. Flash Lidar can generate 3-Dimensional images of the terrain to identify hazardous features such as craters, rocks, and steep slopes during the final stages of descent and landing. The onboard flight comptuer can use the 3-D map of terain to guide the vehicle to a safe site. The capabilities of Flash Lidar technology were evaluated through a series of static tests using a calibrated target and through dynamic tests aboard a helicopter and a fixed wing airctarft. The aircraft flight tests were perfomed over Moonlike terrain in the California and Nevada deserts. This paper briefly describes the Flash Lidar static and aircraft flight test results. These test results are analyzed against the landing application requirements to identify the areas of technology improvement. The ongoing technology advancement activities are then explained and their goals are described.

  1. 3D high throughput screening and profiling of embryoid bodies in thermoformed microwell plates.

    PubMed

    Vrij, E J; Espinoza, S; Heilig, M; Kolew, A; Schneider, M; van Blitterswijk, C A; Truckenmüller, R K; Rivron, N C

    2016-02-21

    3D organoids using stem cells to study development and disease are now widespread. These models are powerful to mimic in vivo situations but are currently associated with high variability and low throughput. For biomedical research, platforms are thus necessary to increase reproducibility and allow high-throughput screens (HTS). Here, we introduce a microwell platform, integrated in standard culture plates, for functional HTS. Using micro-thermoforming, we form round-bottom microwell arrays from optically clear cyclic olefin polymer films, and assemble them with bottom-less 96-well plates. We show that embryonic stem cells aggregate faster and more reproducibly (centricity, circularity) as compared to a state-of-the-art microwell array. We then run a screen of a chemical library to direct differentiation into primitive endoderm (PrE) and, using on-chip high content imaging (HCI), we identify molecules, including regulators of the cAMP pathway, regulating tissue size, morphology and PrE gene activity. We propose that this platform will benefit to the systematic study of organogenesis in vitro.

  2. Utilization of 3-D Imaging Flash Lidar Technology for Autonomous Safe Landing on Planetary Bodies

    NASA Technical Reports Server (NTRS)

    Amzajerdian, Farzin; Vanek, Michael; Petway, Larry; Pierrotter, Diego; Busch, George; Bulyshev, Alexander

    2010-01-01

    NASA considers Flash Lidar a critical technology for enabling autonomous safe landing of future large robotic and crewed vehicles on the surface of the Moon and Mars. Flash Lidar can generate 3-Dimensional images of the terrain to identify hazardous features such as craters, rocks, and steep slopes during the final stages of descent and landing. The onboard flight computer can use the 3-D map of terrain to guide the vehicle to a safe site. The capabilities of Flash Lidar technology were evaluated through a series of static tests using a calibrated target and through dynamic tests aboard a helicopter and a fixed wing aircraft. The aircraft flight tests were performed over Moon-like terrain in the California and Nevada deserts. This paper briefly describes the Flash Lidar static and aircraft flight test results. These test results are analyzed against the landing application requirements to identify the areas of technology improvement. The ongoing technology advancement activities are then explained and their goals are described.

  3. Effect of wing mass in free flight by a butterfly-like 3D flapping wing-body model

    NASA Astrophysics Data System (ADS)

    Suzuki, Kosuke; Okada, Iori; Yoshino, Masato

    2016-11-01

    The effect of wing mass in free flight of a flapping wing is investigated by numerical simulations based on an immersed boundary-lattice Boltzmann method. We consider a butterfly-like 3D flapping wing-model consisting of two square wings with uniform mass density connected by a rod-shaped body. We simulate free flights of the wing-body model with various mass ratios of the wing to the whole of the model. As a result, it is found that the lift and thrust forces decrease as the mass ratio increases, since the body with a large mass ratio experiences large vertical and horizontal oscillations in one period and consequently the wing tip speed relatively decreases. In addition, we find the critical mass ratio between upward flight and downward flight for various Reynolds numbers. This work was supported by JSPS KAKENHI Grant Number JP16K18012.

  4. A hierarchical 3D segmentation method and the definition of vertebral body coordinate systems for QCT of the lumbar spine.

    PubMed

    Mastmeyer, André; Engelke, Klaus; Fuchs, Christina; Kalender, Willi A

    2006-08-01

    We have developed a new hierarchical 3D technique to segment the vertebral bodies in order to measure bone mineral density (BMD) with high trueness and precision in volumetric CT datasets. The hierarchical approach starts with a coarse separation of the individual vertebrae, applies a variety of techniques to segment the vertebral bodies with increasing detail and ends with the definition of an anatomic coordinate system for each vertebral body, relative to which up to 41 trabecular and cortical volumes of interest are positioned. In a pre-segmentation step constraints consisting of Boolean combinations of simple geometric shapes are determined that enclose each individual vertebral body. Bound by these constraints viscous deformable models are used to segment the main shape of the vertebral bodies. Volume growing and morphological operations then capture the fine details of the bone-soft tissue interface. In the volumes of interest bone mineral density and content are determined. In addition, in the segmented vertebral bodies geometric parameters such as volume or the length of the main axes of inertia can be measured. Intra- and inter-operator precision errors of the segmentation procedure were analyzed using existing clinical patient datasets. Results for segmented volume, BMD, and coordinate system position were below 2.0%, 0.6%, and 0.7%, respectively. Trueness was analyzed using phantom scans. The bias of the segmented volume was below 4%; for BMD it was below 1.5%. The long-term goal of this work is improved fracture prediction and patient monitoring in the field of osteoporosis. A true 3D segmentation also enables an accurate measurement of geometrical parameters that may augment the clinical value of a pure BMD analysis.

  5. Optimization of transmission and emission scan duration in 3D whole-body PET

    SciTech Connect

    Beyer, T.; Kinahan, P.E.; Townsend, D.W.

    1996-12-31

    Whole-body PET imaging is being increasingly used to identify and localize malignant disease remote from the site of the primary tumor. Patients are typically scanned at multiple contiguous bed positions over an axial length of 75-100 cm. For oncology patients, the total scan duration should not exceed about an hour and therefore only 5-10 minutes of imaging can be performed at each bed position. To minimize the total scan duration, the transmission scan is often omitted and the emission scan reconstructed without attenuation correction. However, whole-body scans reconstructed without attenuation correction can lead to incorrect diagnosis, particularly for tumors located deep within the body. We have performed a series of torso phantom measurements to investigate the optimal partition of scan time between the emission and transmission scans for a fixed total scan duration. We find that a transmission fraction of about 0.4 is optimal for a 5 min and 10 min total acquisition time per bed position. The optimal partition depends on the way the attenuation correction factors are calculated and on the reconstruction algorithm.

  6. Rigid Body Modes Influence On Microvibration Analysis-Application To Swarm

    NASA Astrophysics Data System (ADS)

    Laduree, G.; Fransen, S.; Baldesi, G.; Pflieger, I.

    2012-07-01

    Microvibrations are defined as low level mechanical disturbances affecting payload performance, generated by mobile parts or mechanism operating on-board the spacecraft, like momentum or reaction wheels, pointing mechanism, cryo-coolers or thrusters. The disturbances caused by these sources are transmitted through the spacecraft structure and excite modes of that structure or elements of the payload impacting its performance (e.g. Line of sight rotations inducing some image quality degradation). The dynamic interaction between these three elements (noise source, spacecraft structure and sensitive receiver) makes the microvibration prediction a delicate problem. Microvibration sources are generally of concern in the frequency range from a few Hz to 1000 Hz. However, in some specific cases, high stability at lower frequencies might be requested. This is the case of the SWARM mission, whose objectives are to provide the best ever survey of the geomagnetic field and its temporal evolution as well as supplementary information for studying the interaction of the magnetic field with other physical quantities describing the Earth system (e.g. ocean circulation). Among its instruments, SWARM is embarking a very sensitive 6-axis accelerometer in the low frequency range (10-8 m/s2 or rad/s2 between 10-4 and 0.1 Hz) located at its Centre of Gravity and an Absolute Scalar Magnetometer located at the tip of a boom far from the spacecraft body. The ASM performs its measurements by rotating an alternative magnetic field around its main axis thanks to a piezo-electric motor. This repeated disturbance might generate some pollution of the accelerometer science data. The objective of this work is to focus on the interaction of the rigid body mode calculation method with the elastic contribution of the normal modes excited by the noise source frequency content. It has indeed been reported in the past that NASTRAN Lanczos rigid body modes may lead to inaccurate rigid-body accelerations

  7. Mutual potential between two rigid bodies with arbitrary shapes and mass distributions

    NASA Astrophysics Data System (ADS)

    Hou, Xiyun; Scheeres, Daniel J.; Xin, Xiaosheng

    2016-09-01

    Formulae to compute the mutual potential, force, and torque between two rigid bodies are given. These formulae are expressed in Cartesian coordinates using inertia integrals. They are valid for rigid bodies with arbitrary shapes and mass distributions. By using recursive relations, these formulae can be easily implemented on computers. Comparisons with previous studies show their superiority in computation speed. Using the algorithm as a tool, the planar problem of two ellipsoids is studied. Generally, potential truncated at the second order is good enough for a qualitative description of the mutual dynamics. However, for ellipsoids with very large non-spherical terms, higher order terms of the potential should be considered, at the cost of a higher computational cost. Explicit formulae of the potential truncated to the fourth order are given.

  8. Mutual potential between two rigid bodies with arbitrary shapes and mass distributions

    NASA Astrophysics Data System (ADS)

    Hou, Xiyun; Scheeres, Daniel J.; Xin, Xiaosheng

    2017-03-01

    Formulae to compute the mutual potential, force, and torque between two rigid bodies are given. These formulae are expressed in Cartesian coordinates using inertia integrals. They are valid for rigid bodies with arbitrary shapes and mass distributions. By using recursive relations, these formulae can be easily implemented on computers. Comparisons with previous studies show their superiority in computation speed. Using the algorithm as a tool, the planar problem of two ellipsoids is studied. Generally, potential truncated at the second order is good enough for a qualitative description of the mutual dynamics. However, for ellipsoids with very large non-spherical terms, higher order terms of the potential should be considered, at the cost of a higher computational cost. Explicit formulae of the potential truncated to the fourth order are given.

  9. Topological classification of the Goryachev integrable case in rigid body dynamics

    NASA Astrophysics Data System (ADS)

    Nikolaenko, S. S.

    2016-01-01

    A topological analysis of the Goryachev integrable case in rigid body dynamics is made on the basis of the Fomenko-Zieschang theory. The invariants (marked molecules) which are obtained give a complete description, from the standpoint of Liouville classification, of the systems of Goryachev type on various level sets of the energy. It turns out that on appropriate energy levels the Goryachev case is Liouville equivalent to many classical integrable systems and, in particular, the Joukowski, Clebsch, Sokolov and Kovalevskaya-Yehia cases in rigid body dynamics, as well as to some integrable billiards in plane domains bounded by confocal quadrics -- in other words, the foliations given by the closures of generic solutions of these systems have the same structure. Bibliography: 15 titles.

  10. The problem of exact interior solutions for rotating rigid bodies in general relativity

    NASA Technical Reports Server (NTRS)

    Wahlquist, H. D.

    1993-01-01

    The (3 + 1) dyadic formalism for timelike congruences is applied to derive interior solutions for stationary, axisymmetric, rigidly rotating bodies. In this approach the mathematics is formulated in terms of three-space-covariant, first-order, vector-dyadic, differential equations for a and Omega, the acceleration and angular velocity three-vectors of the rigid body; for T, the stress dyadic of the matter; and for A and B, the 'electric' and 'magnetic' Weyl curvature dyadics which describe the gravitational field. It is shown how an appropriate ansatz for the forms of these dyadics can be used to discover exact rotating interior solutions such as the perfect fluid solution first published in 1968. By incorporating anisotropic stresses, a generalization is found of that previous solution and, in addition, a very simple new solution that can only exist in toroidal configurations.

  11. Rigid Body Stability Augmentation Studies for a Wind Tunnel Flutter Model.

    DTIC Science & Technology

    1985-11-01

    evident in the root locus diagrams, Figs 3 and 4. Therefore, the stability augmentation system (SAS) was required to - provide basic stability and if... augmentation system (SAS) control law for it. The RAE designed control system simulation and analysis computer package ’TSIM’ (Refs. 3, 4) was used to program...One of my activities in preparation for the Phase 2 trials was to investigate the rigid-body response of the model and to develop a stability

  12. The phase topology of a special case of Goryachev integrability in rigid body dynamics

    SciTech Connect

    Ryabov, P. E.

    2014-07-31

    The phase topology of a special case of Goryachev integrability in the problem of motion of a rigid body in a fluid is investigated using the method of Boolean functions, which was developed by Kharlamov for algebraically separated systems. The bifurcation diagram of the moment map is found and the Fomenko invariant, which classifies the systems up to rough Liouville equivalence, is specified. Bibliography: 15 titles. (paper)

  13. Hamilton's Equations with Euler Parameters for Rigid Body Dynamics Modeling. Chapter 3

    NASA Technical Reports Server (NTRS)

    Shivarama, Ravishankar; Fahrenthold, Eric P.

    2004-01-01

    A combination of Euler parameter kinematics and Hamiltonian mechanics provides a rigid body dynamics model well suited for use in strongly nonlinear problems involving arbitrarily large rotations. The model is unconstrained, free of singularities, includes a general potential energy function and a minimum set of momentum variables, and takes an explicit state space form convenient for numerical implementation. The general formulation may be specialized to address particular applications, as illustrated in several three dimensional example problems.

  14. A new pre-loaded beam geometric stiffness matrix with full rigid body capabilities

    NASA Technical Reports Server (NTRS)

    Bosela, P. A.; Fertis, D. G.; Shaker, F. J.

    1992-01-01

    Space structures, such as the Space Station solar arrays, must be extremely light-weight, flexible structures. Accurate prediction of the natural frequencies and mode shapes is essential for determining the structural adequacy of components, and designing a controls system. The tension pre-load in the 'blanket' of photovoltaic solar collectors, and the free/free boundary conditions of a structure in space, causes serious reservations on the use of standard finite element techniques of solution. In particular, a phenomenon known as 'grounding', or false stiffening, of the stiffness matrix occurs during rigid body rotation. The authors have previously shown that the grounding phenomenon is caused by a lack of rigid body rotational capability, and is typical in beam geometric stiffness matrices formulated by others, including those which contain higher order effects. The cause of the problem was identified as the force imbalance inherent in the formulations. In this paper, the authors develop a beam geometric stiffness matrix for a directed force problem, and show that the resultant global stiffness matrix contains complete rigid body mode capabilities, and performs very well in the diagonalization methodology customarily used in dynamic analysis.

  15. An Interface for Specifying Rigid-Body Motions for CFD Applications

    NASA Technical Reports Server (NTRS)

    Murman, Scott M.; Chan, William; Aftosmis, Michael; Meakin, Robert L.; Kwak, Dochan (Technical Monitor)

    2003-01-01

    An interface for specifying rigid-body motions for CFD applications is presented. This interface provides a means of describing a component hierarchy in a geometric configuration, as well as the motion (prescribed or six-degree-of-freedom) associated with any component. The interface consists of a general set of datatypes, along with rules for their interaction, and is designed to be flexible in order to evolve as future needs dictate. The specification is currently implemented with an XML file format which is portable across platforms and applications. The motion specification is capable of describing general rigid body motions, and eliminates the need to write and compile new code within the application software for each dynamic configuration, allowing client software to automate dynamic simulations. The interface is integrated with a GUI tool which allows rigid body motions to be prescribed and verified interactively, promoting access to non-expert users. Illustrative examples, as well as the raw XML source of the file specifications, are included.

  16. Strongly coupled dynamics of fluids and rigid-body systems with the immersed boundary projection method

    NASA Astrophysics Data System (ADS)

    Wang, Chengjie; Eldredge, Jeff D.

    2015-08-01

    A strong coupling algorithm is presented for simulating the dynamic interactions between incompressible viscous flows and rigid-body systems in both two- and three-dimensional problems. In this work, the Navier-Stokes equations for incompressible flow are solved on a uniform Cartesian grid by the vorticity-based immersed boundary projection method of Colonius and Taira. Dynamical equations for arbitrary rigid-body systems are also developed. The proposed coupling method attempts to unify the treatment of constraints in the fluid and structure-the incompressibility of the fluid, the linkages in the rigid-body system, and the conditions at the interface-through the use of Lagrange multipliers. The resulting partitioned system of equations is solved with a simple relaxation scheme, based on an identification of virtual inertia from the fluid. The scheme achieves convergence in only 2 to 5 iterations per time step for a wide variety of mass ratios. The formulation requires that only a subset of the discrete fluid equations be solved in each iteration. Several two- and three-dimensional numerical tests are conducted to validate and demonstrate the method, including a falling cylinder, flapping of flexible wings, self-excited oscillations of a system of many linked plates in a free stream, and passive pivoting of a finite aspect ratio plate under the influence of gravity in a free stream. The results from the current method are compared with previous experimental and numerical results and good agreement is achieved.

  17. A generalized framework for interactive dynamic simulation for MultiRigid bodies.

    PubMed

    Son, Wookho; Kim, Kyunghwan; Amato, Nancy M; Trinkle, Jeffrey C

    2004-04-01

    This paper presents a generalized framework for dynamic simulation realized in a prototype simulator called the Interactive Generalized Motion Simulator (I-GMS), which can simulate motions of multirigid-body systems with contact interaction in virtual environments. I-GMS is designed to meet two important goals: generality and interactivity. By generality, we mean a dynamic simulator which can easily support various systems of rigid bodies, ranging from a single free-flying rigid object to complex linkages such as those needed for robotic systems or human body simulation. To provide this generality, we have developed I-GMS in an object-oriented framework. The user interactivity is supported through a haptic interface for articulated bodies, introducing interactive dynamic simulation schemes. This user-interaction is achieved by performing push and pull operations via the PHANToM haptic device, which runs as an integrated part of I-GMS. Also, a hybrid scheme was used for simulating internal contacts (between bodies in the multirigid-body system) in the presence of friction, which could avoid the nonexistent solution problem often faced when solving contact problems with Coulomb friction. In our hybrid scheme, two impulse-based methods are exploited so that different methods are applied adaptively, depending on whether the current contact situation is characterized as "bouncing" or "steady." We demonstrate the user-interaction capability of I-GMS through on-line editing of trajectories of a 6-degree of freedom (dof) articulated structure.

  18. Resonances in the forced turbulent wake past a 3D blunt body

    NASA Astrophysics Data System (ADS)

    Barros, Diogo; Borée, Jacques; Noack, Bernd R.; Spohn, Andreas

    2016-06-01

    We study the resonances of a forced turbulent wake past a flat-based bluff body using symmetric and antisymmetric actuation modes. The natural, unforced wake flow exhibits broadband dynamics superimposed on oscillatory motions linked to the reminiscent laminar Bénard-von Kármán instability in the turbulent flow. Harmonic and subharmonic resonances can be controlled by the phase relationship of periodic forcing and are linked to the symmetry properties of vortex shedding. Symmetric forcing leads to a strong subharmonic amplification of vortex shedding in the wake, but no harmonic excitation. The robustness of the subharmonic resonance is confirmed at different Reynolds numbers. Antisymmetric actuation, however, promotes a harmonic resonance with very similar wake and drag features.

  19. Force sensing using 3D displacement measurements in linear elastic bodies

    NASA Astrophysics Data System (ADS)

    Feng, Xinzeng; Hui, Chung-Yuen

    2016-07-01

    In cell traction microscopy, the mechanical forces exerted by a cell on its environment is usually determined from experimentally measured displacement by solving an inverse problem in elasticity. In this paper, an innovative numerical method is proposed which finds the "optimal" traction to the inverse problem. When sufficient regularization is applied, we demonstrate that the proposed method significantly improves the widely used approach using Green's functions. Motivated by real cell experiments, the equilibrium condition of a slowly migrating cell is imposed as a set of equality constraints on the unknown traction. Our validation benchmarks demonstrate that the numeric solution to the constrained inverse problem well recovers the actual traction when the optimal regularization parameter is used. The proposed method can thus be applied to study general force sensing problems, which utilize displacement measurements to sense inaccessible forces in linear elastic bodies with a priori constraints.

  20. Automatic Tracking Of Markers From 3D-Measurement Of Human Body Movements During Walking

    NASA Astrophysics Data System (ADS)

    Elsner, Thomas; Meier, G.; Baumann, Juerg U.

    1989-04-01

    For human motion analysis, the spatio-temporal resolution of cinematographic registrations of body marker positions is still higher than the results of the best opto electronic systems available for this purpose today. So far, the need for manual digitization of several thousand marker positions per tested person has made this method unpractical for regular applications. An interactive and largely automated system for marker recognition and tracking from 16 mm film images based on progress in digital image processing has been developed and tested. Projected pictures are digitized with a high-resolution CCD-camera (1320x1035 pixel), processed, analyzed and serially evaluated with an interactive image analysis system SIGNUM IS200.

  1. Analytic Theory and Control of the Motion of Spinning Rigid Bodies

    NASA Technical Reports Server (NTRS)

    Tsiotras, Panagiotis

    1993-01-01

    Numerical simulations are often resorted to, in order to understand the attitude response and control characteristics of a rigid body. However, this approach in performing sensitivity and/or error analyses may be prohibitively expensive and time consuming, especially when a large number of problem parameters are involved. Thus, there is an important role for analytical models in obtaining an understanding of the complex dynamical behavior. In this dissertation, new analytic solutions are derived for the complete attitude motion of spinning rigid bodies, under minimal assumptions. Hence, we obtain the most general solutions reported in the literature so far. Specifically, large external torques and large asymmetries are included in the problem statement. Moreover, problems involving large angular excursions are treated in detail. A new tractable formulation of the kinematics is introduced which proves to be extremely helpful in the search for analytic solutions of the attitude history of such kinds of problems. The main utility of the new formulation becomes apparent however, when searching for feedback control laws for stabilization and/or reorientation of spinning spacecraft. This is an inherently nonlinear problem, where standard linear control techniques fail. We derive a class of control laws for spin axis stabilization of symmetric spacecraft using only two pairs of gas jet actuators. Practically, this could correspond to a spacecraft operating in failure mode, for example. Theoretically, it is also an important control problem which, because of its difficulty, has received little, if any, attention in the literature. The proposed control laws are especially simple and elegant. A feedback control law that achieves arbitrary reorientation of the spacecraft is also derived, using ideas from invariant manifold theory. The significance of this research is twofold. First, it provides a deeper understanding of the fundamental behavior of rigid bodies subject to body

  2. Unsaturated lipid bodies as a hallmark of inflammation studied by Raman 2D and 3D microscopy

    NASA Astrophysics Data System (ADS)

    Czamara, K.; Majzner, K.; Selmi, A.; Baranska, M.; Ozaki, Y.; Kaczor, A.

    2017-01-01

    Endothelial HMEC-1 cells incubated with pro-inflammatory cytokine TNF-α for 6 and 24 hours were studied as a model of inflammation using Raman imaging. Striking changes in distribution, composition and concentration of cellular lipids were observed after exposure to TNF-α compared to the control. In particular, 3D Raman imaging revealed a significant increase in the amount of lipid entities formed under inflammation. Lipid bodies were randomly distributed in the cytoplasm and two types of droplets were assembled: more saturated one, in spectral characteristics resembling phosphatidylcholine and saturated cholesteryl esters, observed also in the control, and highly unsaturated one, containing also cholesterols, being a hallmark of inflamed cells. The statistical analysis showed that the number of lipid bodies was significantly dependent on the exposure time to TNF-α. Overall, observed formation of unsaturated lipid droplets can be directly correlated with the increase in production of prostacyclins - endogenous inflammation mediators.

  3. ZIP3D: An elastic and elastic-plastic finite-element analysis program for cracked bodies

    NASA Technical Reports Server (NTRS)

    Shivakumar, K. N.; Newman, J. C., Jr.

    1990-01-01

    ZIP3D is an elastic and an elastic-plastic finite element program to analyze cracks in three dimensional solids. The program may also be used to analyze uncracked bodies or multi-body problems involving contacting surfaces. For crack problems, the program has several unique features including the calculation of mixed-mode strain energy release rates using the three dimensional virtual crack closure technique, the calculation of the J integral using the equivalent domain integral method, the capability to extend the crack front under monotonic or cyclic loading, and the capability to close or open the crack surfaces during cyclic loading. The theories behind the various aspects of the program are explained briefly. Line-by-line data preparation is presented. Input data and results for an elastic analysis of a surface crack in a plate and for an elastic-plastic analysis of a single-edge-crack-tension specimen are also presented.

  4. Unsaturated lipid bodies as a hallmark of inflammation studied by Raman 2D and 3D microscopy

    PubMed Central

    Czamara, K.; Majzner, K.; Selmi, A.; Baranska, M.; Ozaki, Y.; Kaczor, A.

    2017-01-01

    Endothelial HMEC-1 cells incubated with pro-inflammatory cytokine TNF-α for 6 and 24 hours were studied as a model of inflammation using Raman imaging. Striking changes in distribution, composition and concentration of cellular lipids were observed after exposure to TNF-α compared to the control. In particular, 3D Raman imaging revealed a significant increase in the amount of lipid entities formed under inflammation. Lipid bodies were randomly distributed in the cytoplasm and two types of droplets were assembled: more saturated one, in spectral characteristics resembling phosphatidylcholine and saturated cholesteryl esters, observed also in the control, and highly unsaturated one, containing also cholesterols, being a hallmark of inflamed cells. The statistical analysis showed that the number of lipid bodies was significantly dependent on the exposure time to TNF-α. Overall, observed formation of unsaturated lipid droplets can be directly correlated with the increase in production of prostacyclins - endogenous inflammation mediators. PMID:28098251

  5. A Registration Method Based on Contour Point Cloud for 3D Whole-Body PET and CT Images

    PubMed Central

    Yang, Qiyao; Wang, Zhiguo; Zhang, Guoxu

    2017-01-01

    The PET and CT fusion image, combining the anatomical and functional information, has important clinical meaning. An effective registration of PET and CT images is the basis of image fusion. This paper presents a multithread registration method based on contour point cloud for 3D whole-body PET and CT images. Firstly, a geometric feature-based segmentation (GFS) method and a dynamic threshold denoising (DTD) method are creatively proposed to preprocess CT and PET images, respectively. Next, a new automated trunk slices extraction method is presented for extracting feature point clouds. Finally, the multithread Iterative Closet Point is adopted to drive an affine transform. We compare our method with a multiresolution registration method based on Mattes Mutual Information on 13 pairs (246~286 slices per pair) of 3D whole-body PET and CT data. Experimental results demonstrate the registration effectiveness of our method with lower negative normalization correlation (NC = −0.933) on feature images and less Euclidean distance error (ED = 2.826) on landmark points, outperforming the source data (NC = −0.496, ED = 25.847) and the compared method (NC = −0.614, ED = 16.085). Moreover, our method is about ten times faster than the compared one. PMID:28316979

  6. Drag Prediction for the NASA CRM Wing-Body-Tail Using CFL3D and OVERFLOW on an Overset Mesh

    NASA Technical Reports Server (NTRS)

    Sclafani, Anthony J.; DeHaan, Mark A.; Vassberg, John C.; Rumsey, Christopher L.; Pulliam, Thomas H.

    2010-01-01

    In response to the fourth AIAA CFD Drag Prediction Workshop (DPW-IV), the NASA Common Research Model (CRM) wing-body and wing-body-tail configurations are analyzed using the Reynolds-averaged Navier-Stokes (RANS) flow solvers CFL3D and OVERFLOW. Two families of structured, overset grids are built for DPW-IV. Grid Family 1 (GF1) consists of a coarse (7.2 million), medium (16.9 million), fine (56.5 million), and extra-fine (189.4 million) mesh. Grid Family 2 (GF2) is an extension of the first and includes a superfine (714.2 million) and an ultra-fine (2.4 billion) mesh. The medium grid anchors both families with an established build process for accurate cruise drag prediction studies. This base mesh is coarsened and enhanced to form a set of parametrically equivalent grids that increase in size by a factor of roughly 3.4 from one level to the next denser level. Both CFL3D and OVERFLOW are run on GF1 using a consistent numerical approach. Additional OVERFLOW runs are made to study effects of differencing scheme and turbulence model on GF1 and to obtain results for GF2. All CFD results are post-processed using Richardson extrapolation, and approximate grid-converged values of drag are compared. The medium grid is also used to compute a trimmed drag polar for both codes.

  7. Technical note: Criterion validity of whole body surface area equations: a comparison using 3D laser scanning.

    PubMed

    Daniell, Nathan; Olds, Timothy; Tomkinson, Grant

    2012-05-01

    Measurements of whole body surface area (WBSA) have important applications in numerous fields including biological anthropology, clinical medicine, biomechanics, and sports science. Currently, WBSA is most often estimated using predictive equations due to the complex and time consuming methods required for direct measurement. The main aim of this study was to identify whether there were significant and meaningful differences between WBSA measurements taken using a whole body three-dimensional (3D) scanner (criterion measure) and the estimates derived from each WBSA equation identified from a systematic review. The study also aimed to determine whether differences varied according to body mass index (BMI), sex, or athletic status. Fifteen WBSA equations were compared with direct measurements taken on 1,714 young adult subjects, aged 18-30 years, using the Vitus Smart 3D whole body scanner, including 1,452 subjects (753 males, 699 females) from the general Australian population and 262 rowers (148 males, 114 females). Mixed-design analysis of variances determined significant differences and accuracy was quantified using Bland-Altman analysis and effect sizes. Thirteen of the 15 equations overestimated WBSA. With a few exceptions, equations were accurate with a low-systematic error (bias ≤2%) and low-random error (standard deviation of the differences 1.5-3.0%). However, BMI did have a substantial impact with the accuracy of some WBSA equations varying between the four BMI categories. The Shuter and Aslani: Eur J Appl Physiol 82 (2000) 250-254 equation was identified as the most accurate equation and should be used for Western populations 18-30 years of age. Care must be taken when deciding which equation to use when estimating WBSA.

  8. General Relativistic Elastic Body, Fluid,quasi-rigid Body, Quasi-liquid and Others in Multiple Coordinate Systems

    NASA Astrophysics Data System (ADS)

    Xu, Chongming

    2009-05-01

    The approximation method in multiple coordinate systems at first post Newtonian (1 PN) level has been established by Darmour, Soffel and Xu (Phys. Rev. D(PRD) 43, 3273 (1991);D 45, 1017(1992);D 47, 3124 (1993);D 49, 618 (1994)). Normally, to discuss an astronomical object (e.g. a star in binary systems or the earth in solar system) we need multiple coordinate systems, especially for precise astrometry 1 PN (some time even 2 PN) approximate method is required. As we know up to now the ideas on elastic body, fluid, rigid body and liquid in the framework of Newtonian physics are still very useful for understanding and calculating some practical problems. Although the general relativistic theories of elastic body, general relativistic hydrodynamics and post-Newtonian quasi-rigid body have been discussed by many authors (including our papers (PRD63, 043002(2001); D63, 064001(2001); D68, 064009(2003); D69, 024003(2004); D71,024030 (2005))), but there is no completing discussion on all of these ideas in a unified point view. The applications of these ideas in the general relativity are important in the research fields of astrometry and geophysics, especially in case precise measurements reach so higher level (millimicro arc sec). The extended relativistic versions of these ideas should be revised the Newtonian results. In this paper, we shall give a complete discussion on all of these ideas in 1 PN approximation. We shall clarify the ideas on perfect elastic material, quasi-rigid body, quasi-liquid and so on with some precise mathematical forms. For fluid we show the hydrodynamic equations of a non-perfect fluid in multiple coordinates systems (both local and global).

  9. Simulation of vortex-induced vibrations of a cylinder using ANSYS CFX rigid body solver

    NASA Astrophysics Data System (ADS)

    Izhar, Abubakar; Qureshi, Arshad Hussain; Khushnood, Shahab

    2017-03-01

    This article simulates the vortex-induced oscillations of a rigid circular cylinder with elastic support using the new ANSYS CFX rigid body solver. This solver requires no solid mesh to setup FSI (Fluid Structure Interaction) simulation. The two-way case was setup in CFX only. Specific mass of the cylinder and flow conditions were similar to previous experimental data with mass damping parameter equal to 0.04, specific mass of 1 and Reynolds number of 3800. Two dimensional simulations were setup. Both one-degree-of-freedom and two-degree-of-freedom cases were run and results were obtained for both cases with reasonable accuracy as compared with experimental results. Eight-figure XY trajectory and lock-in behavior were clearly captured. The obtained results were satisfactory.

  10. Proton-detected 3D (1)H/(13)C/(1)H correlation experiment for structural analysis in rigid solids under ultrafast-MAS above 60 kHz.

    PubMed

    Zhang, Rongchun; Nishiyama, Yusuke; Ramamoorthy, Ayyalusamy

    2015-10-28

    A proton-detected 3D (1)H/(13)C/(1)H chemical shift correlation experiment is proposed for the assignment of chemical shift resonances, identification of (13)C-(1)H connectivities, and proximities of (13)C-(1)H and (1)H-(1)H nuclei under ultrafast magic-angle-spinning (ultrafast-MAS) conditions. Ultrafast-MAS is used to suppress all anisotropic interactions including (1)H-(1)H dipolar couplings, while the finite-pulse radio frequency driven dipolar recoupling (fp-RFDR) pulse sequence is used to recouple dipolar couplings among protons and the insensitive nuclei enhanced by polarization transfer technique is used to transfer magnetization between heteronuclear spins. The 3D experiment eliminates signals from non-carbon-bonded protons and non-proton-bonded carbons to enhance spectral resolution. The 2D (F1/F3) (1)H/(1)H and 2D (13)C/(1)H (F2/F3) chemical shift correlation spectra extracted from the 3D spectrum enable the identification of (1)H-(1)H proximity and (13)C-(1)H connectivity. In addition, the 2D (F1/F2) (1)H/(13)C chemical shift correlation spectrum, incorporated with proton magnetization exchange via the fp-RFDR recoupling of (1)H-(1)H dipolar couplings, enables the measurement of proximities between (13)C and even the remote non-carbon-bonded protons. The 3D experiment also gives three-spin proximities of (1)H-(1)H-(13)C chains. Experimental results obtained from powder samples of L-alanine and L-histidine ⋅ H2O ⋅ HCl demonstrate the efficiency of the 3D experiment.

  11. Proton-detected 3D 1H/13C/1H correlation experiment for structural analysis in rigid solids under ultrafast-MAS above 60 kHz

    NASA Astrophysics Data System (ADS)

    Zhang, Rongchun; Nishiyama, Yusuke; Ramamoorthy, Ayyalusamy

    2015-10-01

    A proton-detected 3D 1H/13C/1H chemical shift correlation experiment is proposed for the assignment of chemical shift resonances, identification of 13C-1H connectivities, and proximities of 13C-1H and 1H-1H nuclei under ultrafast magic-angle-spinning (ultrafast-MAS) conditions. Ultrafast-MAS is used to suppress all anisotropic interactions including 1H-1H dipolar couplings, while the finite-pulse radio frequency driven dipolar recoupling (fp-RFDR) pulse sequence is used to recouple dipolar couplings among protons and the insensitive nuclei enhanced by polarization transfer technique is used to transfer magnetization between heteronuclear spins. The 3D experiment eliminates signals from non-carbon-bonded protons and non-proton-bonded carbons to enhance spectral resolution. The 2D (F1/F3) 1H/1H and 2D 13C/1H (F2/F3) chemical shift correlation spectra extracted from the 3D spectrum enable the identification of 1H-1H proximity and 13C-1H connectivity. In addition, the 2D (F1/F2) 1H/13C chemical shift correlation spectrum, incorporated with proton magnetization exchange via the fp-RFDR recoupling of 1H-1H dipolar couplings, enables the measurement of proximities between 13C and even the remote non-carbon-bonded protons. The 3D experiment also gives three-spin proximities of 1H-1H-13C chains. Experimental results obtained from powder samples of L-alanine and L-histidine ṡ H2O ṡ HCl demonstrate the efficiency of the 3D experiment.

  12. On the Estimation Accuracy of the 3D Body Center of Mass Trajectory during Human Locomotion: Inverse vs. Forward Dynamics

    PubMed Central

    Pavei, Gaspare; Seminati, Elena; Cazzola, Dario; Minetti, Alberto E.

    2017-01-01

    The dynamics of body center of mass (BCoM) 3D trajectory during locomotion is crucial to the mechanical understanding of the different gaits. Forward Dynamics (FD) obtains BCoM motion from ground reaction forces while Inverse Dynamics (ID) estimates BCoM position and speed from motion capture of body segments. These two techniques are widely used by the literature on the estimation of BCoM. Despite the specific pros and cons of both methods, FD is less biased and considered as the golden standard, while ID estimates strongly depend on the segmental model adopted to schematically represent the moving body. In these experiments a single subject walked, ran, (uni- and bi-laterally) skipped, and race-walked at a wide range of speeds on a treadmill with force sensors underneath. In all conditions a simultaneous motion capture (8 cameras, 36 markers) took place. 3D BCoM trajectories computed according to five marker set models of ID have been compared to the one obtained by FD on the same (about 2,700) strides. Such a comparison aims to check the validity of the investigated models to capture the “true” dynamics of gaits in terms of distance between paths, mechanical external work and energy recovery. Results allow to conclude that: (1) among gaits, race walking is the most critical in being described by ID, (2) among the investigated segmental models, those capturing the motion of four limbs and trunk more closely reproduce the subtle temporal and spatial changes of BCoM trajectory within the strides of most gaits, (3) FD-ID discrepancy in external work is speed dependent within a gait in the most unsuccessful models, and (4) the internal work is not affected by the difference in BCoM estimates. PMID:28337148

  13. On the Estimation Accuracy of the 3D Body Center of Mass Trajectory during Human Locomotion: Inverse vs. Forward Dynamics.

    PubMed

    Pavei, Gaspare; Seminati, Elena; Cazzola, Dario; Minetti, Alberto E

    2017-01-01

    The dynamics of body center of mass (BCoM) 3D trajectory during locomotion is crucial to the mechanical understanding of the different gaits. Forward Dynamics (FD) obtains BCoM motion from ground reaction forces while Inverse Dynamics (ID) estimates BCoM position and speed from motion capture of body segments. These two techniques are widely used by the literature on the estimation of BCoM. Despite the specific pros and cons of both methods, FD is less biased and considered as the golden standard, while ID estimates strongly depend on the segmental model adopted to schematically represent the moving body. In these experiments a single subject walked, ran, (uni- and bi-laterally) skipped, and race-walked at a wide range of speeds on a treadmill with force sensors underneath. In all conditions a simultaneous motion capture (8 cameras, 36 markers) took place. 3D BCoM trajectories computed according to five marker set models of ID have been compared to the one obtained by FD on the same (about 2,700) strides. Such a comparison aims to check the validity of the investigated models to capture the "true" dynamics of gaits in terms of distance between paths, mechanical external work and energy recovery. Results allow to conclude that: (1) among gaits, race walking is the most critical in being described by ID, (2) among the investigated segmental models, those capturing the motion of four limbs and trunk more closely reproduce the subtle temporal and spatial changes of BCoM trajectory within the strides of most gaits, (3) FD-ID discrepancy in external work is speed dependent within a gait in the most unsuccessful models, and (4) the internal work is not affected by the difference in BCoM estimates.

  14. Sci—Sat AM: Stereo — 01: 3D Pre-treatment Dose Verification for Stereotactic Body Radiation Therapy Patients

    SciTech Connect

    Asuni, G; Beek, T van; Van Utyven, E; McCowan, P; McCurdy, B.M.C.

    2014-08-15

    Radical treatment techniques such as stereotactic body radiation therapy (SBRT) are becoming popular and they involve delivery of large doses in fewer fractions. Due to this feature of SBRT, a high-resolution, pre-treatment dose verification method that makes use of a 3D patient representation would be appropriate. Such a technique will provide additional information about dose delivered to the target volume(s) and organs-at-risk (OARs) in the patient volume compared to 2D verification methods. In this work, we investigate an electronic portal imaging device (EPID) based pre-treatment QA method which provides an accurate reconstruction of the 3D-dose distribution in the patient model. Customized patient plans are delivered ‘in air’ and the portal images are collected using the EPID in cine mode. The images are then analysed to determine an estimate of the incident energy fluence. This is then passed to a collapsed-cone convolution dose algorithm which reconstructs a 3D patient dose estimate on the CT imaging dataset. To date, the method has been applied to 5 SBRT patient plans. Reconstructed doses were compared to those calculated by the TPS. Reconstructed mean doses were mostly within 3% of those in the TPS. DVHs of target volumes and OARs compared well. The Chi pass rates using 3%/3mm in the high dose region are greater than 97% in all cases. These initial results demonstrate clinical feasibility and utility of a robust, efficient, effective and convenient pre-treatment QA method using EPID. Research sponsored in part by Varian Medical Systems.

  15. What Is an Attractive Body? Using an Interactive 3D Program to Create the Ideal Body for You and Your Partner

    PubMed Central

    Crossley, Kara L.; Cornelissen, Piers L.; Tovée, Martin J.

    2012-01-01

    What is the ideal body size and shape that we want for ourselves and our partners? What are the important physical features in this ideal? And do both genders agree on what is an attractive body? To answer these questions we used a 3D interactive software system which allows our participants to produce a photorealistic, virtual male or female body. Forty female and forty male heterosexual Caucasian observers (females mean age 19.10 years, s.d. 1.01; 40 males mean age 19.84, s.d. 1.66) set their own ideal size and shape, and the size and shape of their ideal partner using the DAZ studio image manipulation programme. In this programme the shape and size of a 3D body can be altered along 94 independent dimensions, allowing each participant to create the exact size and shape of the body they want. The volume (and thus the weight assuming a standard density) and the circumference of the bust, waist and hips of these 3D models can then be measured. The ideal female body set by women (BMI = 18.9, WHR = 0.70, WCR = 0.67) was very similar to the ideal partner set by men, particularly in their BMI (BMI = 18.8, WHR = 0.73, WCR = 0.69). This was a lower BMI than the actual BMI of 39 of the 40 women. The ideal male body set by the men (BMI = 25.9, WHR = 0.87, WCR = 0.74) was very similar to the ideal partner set by the women (BMI = 24.5, WHR = 0.86, WCR = 0.77). This was a lower BMI than the actual BMI of roughly half of the men and a higher BMI than the other half. The results suggest a consistent preference for an ideal male and female body size and shape across both genders. The results also suggest that both BMI and torso shape are important components for the creation of the ideal body. PMID:23209791

  16. Implementation of Kane's Method for a Spacecraft Composed of Multiple Rigid Bodies

    NASA Technical Reports Server (NTRS)

    Stoneking, Eric T.

    2013-01-01

    Equations of motion are derived for a general spacecraft composed of rigid bodies connected via rotary (spherical or gimballed) joints in a tree topology. Several supporting concepts are developed in depth. Basis dyads aid in the transition from basis-free vector equations to component-wise equations. Joint partials allow abstraction of 1-DOF, 2-DOF, 3-DOF gimballed and spherical rotational joints to a common notation. The basic building block consisting of an "inner" body and an "outer" body connected by a joint enables efficient organization of arbitrary tree structures. Kane's equation is recast in a form which facilitates systematic assembly of large systems of equations, and exposes a relationship of Kane's equation to Newton and Euler's equations which is obscured by the usual presentation. The resulting system of dynamic equations is of minimum dimension, and is suitable for numerical solution by computer. Implementation is ·discussed, and illustrative simulation results are presented.

  17. Recursive dynamics of topological trees of rigid bodies via Kalman filtering and Bryson-Frazier smoothing

    NASA Technical Reports Server (NTRS)

    Rodriguez, G.

    1988-01-01

    The inverse and forward dynamics problems for a set of rigid bodies connected by hinges to form a topological tree are solved by using recursive techniques from linear filtering and smoothing theory. An inward filtering sequence computes a set of constraint moments and forces. This is followed by an outward sequence to determine a corresponding set of angular and linear accelerations. An inward sequence begins at the tips of all of the terminal bodies of the tree and proceeds inwardly through all of the branches until it reaches the root. Similarly, an outward sequence begins at the root and propagates to all of the tree branches until it reaches the tips of the terminal bodies. The paper also provides an approach to evaluate recursively the composite multibody system inertia matrix and its inverse.

  18. The dynamics of a rigid body in potential flow with circulation

    NASA Astrophysics Data System (ADS)

    Vankerschaver, J.; Kanso, E.; Marsden, J. E.

    2010-10-01

    We consider the motion of a two-dimensional body of arbitrary shape in a planar irrotational, incompressible fluid with a given amount of circulation around the body. We derive the equations of motion for this system by performing symplectic reduction with respect to the group of volume-preserving diffeomorphisms and obtain the relevant Poisson structures after a further Poisson reduction with respect to the group of translations and rotations. In this way, we recover the equations of motion given for this system by Chaplygin and Lamb, and we give a geometric interpretation for the Kutta-Zhukowski force as a curvature-related effect. In addition, we show that the motion of a rigid body with circulation can be understood as a geodesic flow on a central extension of the special Euclidian group SE(2), and we relate the cocycle in the description of this central extension to a certain curvature tensor.

  19. Attitude dynamics simulation subroutines for systems of hinge-connected rigid bodies

    NASA Technical Reports Server (NTRS)

    Fleischer, G. E.; Likins, P. W.

    1974-01-01

    Several computer subroutines are designed to provide the solution to minimum-dimension sets of discrete-coordinate equations of motion for systems consisting of an arbitrary number of hinge-connected rigid bodies assembled in a tree topology. In particular, these routines may be applied to: (1) the case of completely unrestricted hinge rotations, (2) the totally linearized case (all system rotations are small), and (3) the mixed, or partially linearized, case. The use of the programs in each case is demonstrated using a five-body spacecraft and attitude control system configuration. The ability of the subroutines to accommodate prescribed motions of system bodies is also demonstrated. Complete listings and user instructions are included for these routines (written in FORTRAN V) which are intended as multi- and general-purpose tools in the simulation of spacecraft and other complex electromechanical systems.

  20. Piecewise-rigid 2D-3D registration for pose estimation of snake-like manipulator using an intraoperative x-ray projection

    NASA Astrophysics Data System (ADS)

    Otake, Y.; Murphy, R. J.; Kutzer, M. D.; Taylor, R. H.; Armand, M.

    2014-03-01

    Background: Snake-like dexterous manipulators may offer significant advantages in minimally-invasive surgery in areas not reachable with conventional tools. Precise control of a wire-driven manipulator is challenging due to factors such as cable deformation, unknown internal (cable friction) and external forces, thus requiring correcting the calibration intraoperatively by determining the actual pose of the manipulator. Method: A method for simultaneously estimating pose and kinematic configuration of a piecewise-rigid object such as a snake-like manipulator from a single x-ray projection is presented. The method parameterizes kinematics using a small number of variables (e.g., 5), and optimizes them simultaneously with the 6 degree-of-freedom pose parameter of the base link using an image similarity between digitally reconstructed radiographs (DRRs) of the manipulator's attenuation model and the real x-ray projection. Result: Simulation studies assumed various geometric magnifications (1.2-2.6) and out-of-plane angulations (0°-90°) in a scenario of hip osteolysis treatment, which demonstrated the median joint angle error was 0.04° (for 2.0 magnification, +/-10° out-of-plane rotation). Average computation time was 57.6 sec with 82,953 function evaluations on a mid-range GPU. The joint angle error remained lower than 0.07° while out-of-plane rotation was 0°-60°. An experiment using video images of a real manipulator demonstrated a similar trend as the simulation study except for slightly larger error around the tip attributed to accumulation of errors induced by deformation around each joint not modeled with a simple pin joint. Conclusions: The proposed approach enables high precision tracking of a piecewise-rigid object (i.e., a series of connected rigid structures) using a single projection image by incorporating prior knowledge about the shape and kinematic behavior of the object (e.g., each rigid structure connected by a pin joint parameterized by a

  1. Images of Soft-bodied Animals with External Hard Shell: 3D Visualization of the Embedded Soft Tissue

    SciTech Connect

    Rao, Donepudi V.; Akatsuka, Takao; Tromba, Giuliana

    2004-05-12

    Images of soft-bodied animals (snails) of various types with external hard shell are obtained for 25, 27 and 29 keV synchrotron X-rays. The SYRMEP facility at Elettra,Trieste, Italy and the associated detection system has been used for the image acquisition. The interior properties of the embedded soft tissue are analysed utilizing the software. From the reconstructed images, the soft tissue distribution, void spaces associated with the soft tissue and external hard shell are identified. 3D images are reconstructed at these energies and optimum energy is chosen based on the quality of the image for further analysis. The optimum energy allowed us to visualize the visibility of low absorbing details and interior microstructure of the embedded soft tissue.

  2. Singularities of 3D laminar boundary layer equations and flow structure in their vicinity on conical bodies

    NASA Astrophysics Data System (ADS)

    Shalaev, V. I.

    2016-10-01

    Singularities appearing in solutions of 3D laminar boundary layer (BL) equations, when two streamline families are collided, are discussed. For conical bodies, equations are investigated using asymptotic methods. Analytical solutions are obtained for the outer BL region; their singularities in the runoff plane are studied. The asymptotic flow structure near the singularity is constructed on the base of Navier-Stokes equations at large Reynolds numbers. For different flow regions analytical solutions are found and are matched with BL equation solutions. Properties of BL equations for the near-wall region in the runoff plane are investigated and a criterion of the solution disappearing is found. It is shown that this criterion separates two different topological flow structures and corresponds to the singularity appearance in this plane in solutions of full equations. Calculations confirmed obtained results are presented.

  3. Development of a numerical procedure to map a general 3-d body onto a near-circle

    NASA Technical Reports Server (NTRS)

    Hommel, M. J.

    1986-01-01

    Conformal mapping is a classical technique utilized for solving problems in aerodynamics and hydrodynamics. Conformal mapping is utilized in the construction of grids around airfoils, engine inlets and other aircraft configurations. These shapes are transformed onto a near-circle image for which the equations of fluid motion are discretized on the mapped plane and solved numerically by utilizing the appropriate techniques. In comparison to other grid-generation techniques such as algerbraic or differential type, conformal mapping offers an analytical and accurate form even if the grid deformation is large. One of the most appealing features is that the grid can be constrained to remain orthogonal to the body after the transformation. Hence, the grid is suitable for analyzing the supersonic flow past a blunt object. The associated shock as a coordinate surface adjusts its position in the course of computation until convergence is reached. The present work applied conformal mapping to 3-D bodies with no axis of symmetry such as the Aerobraking Flight Experiment (AFE) vehicle, transforming the AFE shape onto a near-circle image. A numerical procedure and code are used to generate grids around the AFE body.

  4. Study of human body: Kinematics and kinetics of a martial arts (Silat) performers using 3D-motion capture

    NASA Astrophysics Data System (ADS)

    Soh, Ahmad Afiq Sabqi Awang; Jafri, Mohd Zubir Mat; Azraai, Nur Zaidi

    2015-04-01

    The Interest in this studies of human kinematics goes back very far in human history drove by curiosity or need for the understanding the complexity of human body motion. To find new and accurate information about the human movement as the advance computing technology became available for human movement that can perform. Martial arts (silat) were chose and multiple type of movement was studied. This project has done by using cutting-edge technology which is 3D motion capture to characterize and to measure the motion done by the performers of martial arts (silat). The camera will detect the markers (infrared reflection by the marker) around the performer body (total of 24 markers) and will show as dot in the computer software. The markers detected were analyzing using kinematic kinetic approach and time as reference. A graph of velocity, acceleration and position at time,t (seconds) of each marker was plot. Then from the information obtain, more parameters were determined such as work done, momentum, center of mass of a body using mathematical approach. This data can be used for development of the effectiveness movement in martial arts which is contributed to the people in arts. More future works can be implemented from this project such as analysis of a martial arts competition.

  5. Characterization of Self-Excited, Nearly Axisymmetric, Spinning Rigid-Body Motion as an Oblate Epicycloid

    NASA Astrophysics Data System (ADS)

    McNair, S. Lauren; Tragesser, Steven

    2017-03-01

    A unique formulation of the solution to a spinning, nearly axisymmetric rigid-body is presented. Direct integration of the linearized equations of motion gives accurate results for nearly axisymmetric inertia ellipsoids while avoiding the complexity of more general formulations. The simplicity of the formulation lends itself to a better understanding of the system behavior. Specifically, the motion of the spin axis for this nearly axisymmetric case is described by an oblate epicycloid, providing an extension of the classic epicycloid solution for axisymmetric objects.

  6. An implicit time-stepping scheme for rigid body dynamics with Coulomb friction

    SciTech Connect

    STEWART,DAVID; TRINKLE,JEFFREY C.

    2000-02-15

    In this paper a new time-stepping method for simulating systems of rigid bodies is given. Unlike methods which take an instantaneous point of view, the method is based on impulse-momentum equations, and so does not need to explicitly resolve impulsive forces. On the other hand, the method is distinct from previous impulsive methods in that it does not require explicit collision checking and it can handle simultaneous impacts. Numerical results are given for one planar and one three-dimensional example, which demonstrate the practicality of the method, and its convergence as the step size becomes small.

  7. Annihilation of angular momentum drift during spinning-up and thrusting maneuvers of rigid bodies

    NASA Technical Reports Server (NTRS)

    Longuski, J. M.; Kia, T.; Breckenridge, W. G.

    1984-01-01

    A very simple, yet accurate, heuristic solution for the spiral path of the angular momentum vector during spin-up and spin-down maneuvers of rigid body spacecraft is presented. A two-burn scheme is proposed consisting of a burn, a coast, and a second burn of the spin thruster. The appropriate burn times are found by a transcendental equation similar to Kepler's equation. Numerical results verify the accuracy of the burn, coast, and burn times given by closed form expressions. The scheme can also be applied to the problem of axial thrusting during constant spin.

  8. Fast time-reversible algorithms for molecular dynamics of rigid-body systems

    NASA Astrophysics Data System (ADS)

    Kajima, Yasuhiro; Hiyama, Miyabi; Ogata, Shuji; Kobayashi, Ryo; Tamura, Tomoyuki

    2012-06-01

    In this paper, we present time-reversible simulation algorithms for rigid bodies in the quaternion representation. By advancing a time-reversible algorithm [Y. Kajima, M. Hiyama, S. Ogata, and T. Tamura, J. Phys. Soc. Jpn. 80, 114002 (2011), 10.1143/JPSJ.80.114002] that requires iterations in calculating the angular velocity at each time step, we propose two kinds of iteration-free fast time-reversible algorithms. They are easily implemented in codes. The codes are compared with that of existing algorithms through demonstrative simulation of a nanometer-sized water droplet to find their stability of the total energy and computation speeds.

  9. Multiple capture locations for 3D ultrasound-guided robotic retrieval of moving bodies from a beating heart

    NASA Astrophysics Data System (ADS)

    Thienphrapa, Paul; Ramachandran, Bharat; Elhawary, Haytham; Taylor, Russell H.; Popovic, Aleksandra

    2012-02-01

    Free moving bodies in the heart pose a serious health risk as they may be released in the arteries causing blood flow disruption. These bodies may be the result of various medical conditions and trauma. The conventional approach to removing these objects involves open surgery with sternotomy, the use of cardiopulmonary bypass, and a wide resection of the heart muscle. We advocate a minimally invasive surgical approach using a flexible robotic end effector guided by 3D transesophageal echocardiography. In a phantom study, we track a moving body in a beating heart using a modified normalized cross-correlation method, with mean RMS errors of 2.3 mm. We previously found the foreign body motion to be fast and abrupt, rendering infeasible a retrieval method based on direct tracking. We proposed a strategy based on guiding a robot to the most spatially probable location of the fragment and securing it upon its reentry to said location. To improve efficacy in the context of a robotic retrieval system, we extend this approach by exploring multiple candidate capture locations. Salient locations are identified based on spatial probability, dwell time, and visit frequency; secondary locations are also examined. Aggregate results indicate that the location of highest spatial probability (50% occupancy) is distinct from the longest-dwelled location (0.84 seconds). Such metrics are vital in informing the design of a retrieval system and capture strategies, and they can be computed intraoperatively to select the best capture location based on constraints such as workspace, time, and device manipulability. Given the complex nature of fragment motion, the ability to analyze multiple capture locations is a desirable capability in an interventional system.

  10. Rigid body mode identification of the PAH-2 helicopter using the eigensystem realization algorithm

    NASA Technical Reports Server (NTRS)

    Schenk, Axel; Pappa, Richard S.

    1992-01-01

    The rigid body modes of the PAH-2 'Tiger' helicopter were identified using the Eigensystem Realization Algorithm (ERA). This work complements ground vibration tests performed using DLR's traditional phase resonance technique and the ISSPA (Identification of Structural System Parameters) method. Rigid body modal parameters are important for ground resonance prediction. Time-domain data for ERA were obtained by inverse Fourier transformation of frequency response functions measured with stepped-sine excitation. Mode purity (based on the Phase Resonance Criterion) was generally equal to or greater than corresponding results obtained in the ground vibration tests. All identified natural frequencies and mode shapes correlate well with corresponding ground vibration test results. The modal identification approach discussed in this report has become increasingly attractive in recent years due to the steadily declining cost and increased performance of scientific computers. As illustrated in this application, modern time-domain methods can be successfully applied to data acquired using DLR's existing test equipment. Some suggestions are made for future applications of time domain modal identification in this manner.

  11. Rotational kinematics of a rigid body about a fixed axis: development and analysis of an inventory

    NASA Astrophysics Data System (ADS)

    Mashood, K. K.; Singh, Vijay A.

    2015-07-01

    We present the development, administration, and analysis of a focused inventory on the rotational kinematics of a rigid body around a fixed axis. The inventory, which is made up of 13 multiple-choice questions, was developed on the basis of interactions with students and teachers. The systematic and iterative aspects of the construction of the inventory are illustrated. The questions, which were validated, were administered to a set of teachers (N = 25) and two groups of preuniversity students (N = 74 and 905) in India. Students, as well as teachers, exhibited difficulties in applying the operational definition of angular velocity to a rigid body. Many erroneously assumed that an angular acceleration cannot exist without a net torque. Patterns of reasoning resulting in errors were identified and categorized under four broad themes. These include inappropriate extensions of familiar procedural practices, reasoning cued by primitive elements in thought, lack of differentiation between related but distinct concepts, and indiscriminate use of equations. The inventory was also administered to introductory-level students (N = 384) at the University of Washington. Popular distractors to most items were similar to the Indian students.

  12. On the problem of free deceleration of a rigid body in a resisting medium

    NASA Astrophysics Data System (ADS)

    Shamolin, M. V.

    2016-07-01

    A mathematical model of the influence of a medium on a rigid body with some part of its external surface being flat is considered with due allowance for an additional dependence of the moment of the medium action force on the angular velocity of the body. A full system of equations of motion is given under quasi-steady conditions; the dynamic part of this system forms an independent third-order system, and an independent second-order subsystem is split from the full system. A new family of phase portraits on a phase cylinder of quasi-velocities is obtained. It is demonstrated that the results obtained allow one to design hollow circular cylinders ("shell cases"), which can ensure necessary stability in conducting additional full-scale experiments.

  13. Secular solution for delta-V during spin rate change maneuvers of rigid body spacecraft

    NASA Technical Reports Server (NTRS)

    Klumpe, E. W.; Longuski, J. M.

    1984-01-01

    Analytic expressions have been found for Euler's Equations of Motion and for the Eulerian Angles for both symmetric and near symmetric rigid bodies under the influence of arbitrary constant body-fixed torques. These solutions have been used to solve for the secular terms in the translational delta-V equations in inertial space. This secular delta-V solution is of interest in application to spinning spacecraft in that it describes the average direction of the delta-V of the spacecraft during a spin-up maneuver. Numerical integration of the governing differential equations has verified that the secular delta-V solution is valid for large time and is accurate in many physical situations including spin-up maneuvers of the Galileo spacecraft.

  14. Dynamic Behavior of Wind Turbine by a Mixed Flexible-Rigid Multi-Body Model

    NASA Astrophysics Data System (ADS)

    Wang, Jianhong; Qin, Datong; Ding, Yi

    A mixed flexible-rigid multi-body model is presented to study the dynamic behavior of a horizontal axis wind turbine. The special attention is given to flexible body: flexible rotor is modeled by a newly developed blade finite element, support bearing elasticities, variations in the number of teeth in contact as well as contact tooth's elasticities are mainly flexible components in the power train. The couple conditions between different subsystems are established by constraint equations. The wind turbine model is generated by coupling models of rotor, power train and generator with constraint equations together. Based on this model, an eigenproblem analysis is carried out to show the mode shape of rotor and power train at a few natural frequencies. The dynamic responses and contact forces among gears under constant wind speed and fixed pitch angle are analyzed.

  15. The generalized Euler-Poinsot rigid body equations: explicit elliptic solutions

    NASA Astrophysics Data System (ADS)

    Fedorov, Yuri N.; Maciejewski, Andrzej J.; Przybylska, Maria

    2013-10-01

    The classical Euler-Poinsot case of the rigid body dynamics admits a class of simple but non-trivial integrable generalizations, which modify the Poisson equations describing the motion of the body in space. These generalizations possess first integrals which are polynomial in the angular momenta. We consider the modified Poisson equations as a system of linear equations with elliptic coefficients and show that all the solutions of it are single-valued. By using the vector generalization of the Picard theorem, we derive the solutions explicitly in terms of sigma-functions of the corresponding elliptic curve. The solutions are accompanied by a numerical example. We also compare the generalized Poisson equations with the classical third order Halphen equation.

  16. On the geometry of motions in one integrable problem of the rigid body dynamics

    NASA Astrophysics Data System (ADS)

    Kharlamova, I. I.; Savushkin, A. Y.

    2015-01-01

    Due to Poinsot's theorem, the motion of a rigid body about a fixed point is represented as rolling without slipping of the moving hodograph of the angular velocity over the fixed one. If the moving hodograph is a closed curve, visualization of motion is obtained by the method of P.V. Kharlamov. For an arbitrary motion in an integrable problem with an axially symmetric force field the moving hodograph densely fills some two-dimensional surface and the fixed one fills a three-dimensional surface. In this paper, we consider the irreducible integrable case in which both hodographs are two-frequency curves. We obtain the equations of bearing surfaces, illustrate the main types of these surfaces. We propose a method of the so-called non-straight geometric interpretation representing the motion of a body as a superposition of two periodic motions.

  17. Computation of Flow Over a Drag Prediction Workshop Wing/Body Transport Configuration Using CFL3D

    NASA Technical Reports Server (NTRS)

    Rumsey, Christopher L.; Biedron, Robert T.

    2001-01-01

    A Drag Prediction Workshop was held in conjunction with the 19th AIAA Applied Aerodynamics Conference in June 2001. The purpose of the workshop was to assess the prediction of drag by computational methods for a wing/body configuration (DLR-F4) representative of subsonic transport aircraft. This report details computed results submitted to this workshop using the Reynolds-averaged Navier-Stokes code CFL3D. Two supplied grids were used: a point-matched 1-to-1 multi-block grid, and an overset multi-block grid. The 1-to-1 grid, generally of much poorer quality and with less streamwise resolution than the overset grid, is found to be too coarse to adequately resolve the surface pressures. However, the global forces and moments are nonetheless similar to those computed using the overset grid. The effect of three different turbulence models is assessed using the 1-to-1 grid. Surface pressures are very similar overall, and the drag variation due to turbulence model is 18 drag counts. Most of this drag variation is in the friction component, and is attributed in part to insufficient grid resolution of the 1-to-1 grid. The misnomer of 'fully turbulent' computations is discussed; comparisons are made using different transition locations and their effects on the global forces and moments are quantified. Finally, the effect of two different versions of a widely used one-equation turbulence model is explored.

  18. Child t-shirt size data set from 3D body scanner anthropometric measurements and a questionnaire.

    PubMed

    Pierola, A; Epifanio, I; Alemany, S

    2017-04-01

    A dataset of a fit assessment study in children is presented. Anthropometric measurements of 113 children were obtained using a 3D body scanner. Children tested a t-shirt of different sizes and a different model for boys and girls, and their fit was assessed by an expert. This expert labeled the fit as 0 (correct), -1 (if the garment was small for that child), or 1 (if the garment was large for that child) in an ordered factor called Size-fit. Moreover, the fit was numerically assessed from 1 (very poor fit) to 10 (perfect fit) in a variable called Expert evaluation. This data set contains the differences between the reference mannequin of the evaluated size and the child׳s anthropometric measurements for 27 variables. Besides these variables, in the data set, we can also find the gender, the size evaluated, and the size recommended by the expert, including if an intermediate, but nonexistent size between two consecutive sizes would have been the right size. In total, there are 232 observations. The analysis of these data can be found in Pierola et al. (2016) [2].

  19. Classification of the classical SL(2 , R) gauge transformations in the rigid body

    NASA Astrophysics Data System (ADS)

    de la Cruz, Manuel; Gaspar, Néstor; Jiménez-Lara, Lidia; Linares, Román

    2017-04-01

    In this paper we revisit the classification of the gauge transformations in the Euler top system using the generalized classical Hamiltonian dynamics of Nambu. In this framework the Euler equations of motion are bi-Hamiltonian and SL(2 , R) linear combinations of the two Hamiltonians leave the equations of motion invariant, although belonging to inequivalent Lie-Poisson structures. Here we give the explicit form of the Hamiltonian vector fields associated to the components of the angular momentum for every single Lie-Poisson structure including both the asymmetric rigid bodies and its symmetric limits. We also give a detailed classification of the different Lie-Poisson structures recovering all the ones reported previously in the literature.

  20. Unsteady transonic flow past airfoils in rigid-body motion. [UFLO5

    SciTech Connect

    Chang, I C

    1981-03-01

    With the aim of developing a fast and accurate computer code for predicting the aerodynamic forces needed for a flutter analysis, some basic concepts in computational transonics are reviewed. The unsteady transonic flow past airfoils in rigid body motion is adequately described by the potential flow equation as long as the boundary layer remains attached. The two dimensional unsteady transonic potential flow equation in quasilinear form with first order radiation boundary conditions is solved by an alternating direction implicit scheme in an airfoil attached sheared parabolic coordinate system. Numerical experiments show that the scheme is very stable and is able to resolve the higher nonlinear transonic effects for filter analysis within the context of an inviscid theory.

  1. Active control of elastic and rigid body response of a three-dimensional underwater structure

    SciTech Connect

    Suzuki, H.; Yoshida, K.; Watanabe, K.

    1995-02-01

    One key technology for the offshore development of the increasing water depth will be remotely operated installation and construction of flexible structure in the deep water or on the seabed. The flexibility comes from scale-up or weight reduction of the structure. Conventional operation from the sea surfaces is affected by the weather conditions, and, therefore, not so efficient. This paper presents basic research on active control of elastic response and rigid body motion of an underwater elastic structure toward the remotely operated installation technique. The numerical model of the dynamics of the structural model is formulated, and based on the numerical model the control is formulated. The formulated control is tested by computer simulations and model experiments. The structural model is propelled by thrusters and taken from initial position to another position, while the elastic responses are controlled by variable buoyancy-type actuators.

  2. Identification of motion parameters of a rigid body from its orthogonal and perspective projections

    NASA Technical Reports Server (NTRS)

    Ganguly, S.; Ghosh, B.; Tarn, T. J.; Bejczy, A. K.

    1989-01-01

    An estimate is made of the motion parameters, namely, linear and angular velocities, of a rigid body rotating and translating in three-space. The authors assume that the velocities are constant and that the motion is not completely observable. They consider two separate cases of partial observations corresponding to the orthogonal and the perspective projections, respectively. If (x, y, z) is the Cartesian coordinate of the three-space, the authors assume in the first case that the projection of the motion on the x-y plane is observed. If (r, theta, phi) is the polar coordinates of the three-space, they assume in the second case that the parameter vector (theta, phi) is observed. The use of both of these cases to estimate the motion parameters is discussed.

  3. On some approximations of the resultant contact forces and their applications in rigid body dynamics

    NASA Astrophysics Data System (ADS)

    Kudra, Grzegorz; Szewc, Michał; Wojtunik, Igor; Awrejcewicz, Jan

    2016-10-01

    The work presents the possible applications and effectiveness of certain class of models of the resultant friction force and rolling resistance. The friction models are based on the integral model constructed under assumption of fully developed sliding on the plane contact area of general shape and any pressure distribution. Then the integral model of friction force and moment are approximated based on Padé approximants and their generalizations. These models are expected to be computationally effective in numerical simulations of rigid bodies with frictional contacts, such like billiard balls, Thompson top, the wobble stone and many others. In the present work two different examples of application of the developed contact models are presented and tested: a) a billiard ball rolling and sliding on the plane horizontal table; b) a full ellipsoid of revolution in contact with plane and horizontal base.

  4. The Serret-Andoyer Formalism in Rigid-Body Dynamics: 1. Symmetries and Perturbations

    DTIC Science & Technology

    2007-01-01

    2 + ( 1 I1 − 1 I2 ) ∂S ∂θ ( ∂S ∂φ − ∂S ∂ψ cos θ ) sinψ cosψ sin θ + ∂S ∂t = H∗ ( ∂S ∂ P , P , t ) . (50) At this point, Serret [22], Radau [23], and...Andoyer Formalism in Rigid-Body Dynamics: I. Symmetries and Perturbations P . Gurfil1*, A. Elipe2**, W. Tangren3***, and M. Efroimsky4**** 1Faculty of...g3 = GcJ . (42) 3. THE SERRET–ANDOYER TRANSFORMATION 3.1. Richelot (1850), Serret (1866), Radau (1869), Tisserand (1889) The method presently referred

  5. Distributed event-triggered cooperative attitude control of multiple rigid bodies with leader-follower architecture

    NASA Astrophysics Data System (ADS)

    Weng, Shengxuan; Yue, Dong

    2016-02-01

    In this note, the distributed event-triggered cooperative attitude control of multiple rigid bodies with leader-follower architecture is investigated, where both the cases of static and dynamic leaders are all considered. Two distributed triggering procedures are first introduced for the followers and leaders, and then the distributed cooperative controllers are designed under the proposed triggering schemes. Under the designed controllers with the event-triggered strategies, it is shown that the orientations of followers converge to the convex hull formed by the desired leaders' orientations with zero angular velocities. Moreover, the communication pressure in network is reduced and the energy of each agent is saved. Simulation results show the effectiveness of the proposed method.

  6. Dynamics on strata of trigonal Jacobians and some integrable problems of rigid body motion

    NASA Astrophysics Data System (ADS)

    Braden, H. W.; Enolski, V. Z.; Fedorov, Yu N.

    2013-07-01

    We present an algebraic geometrical and analytical description of the Goryachev case of rigid body motion. It belongs to a family of systems sharing the same properties: although completely integrable, they are not algebraically integrable, their solution is not meromorphic in the complex time and involves dynamics on the strata of the Jacobian varieties of trigonal curves. Although the strata of hyperelliptic Jacobians have already appeared in the literature in the context of some dynamical systems, the Goryachev case is the first example of an integrable system whose solution involves a more general curve. Several new features (and formulae) are encountered in the solution given in terms of sigma-functions of such a curve.

  7. Output feedback control for rigid-body attitude with constant disturbances

    NASA Astrophysics Data System (ADS)

    Hu, Jinchang; Zhang, Honghua

    2015-03-01

    In this article, the control problem of rigid-body attitude under constant disturbances without angular-velocity measurement is solved by the combination of the immersion and invariance methodology and the dynamic scaling technique. Two observers, which are respectively for estimating the angular velocity and the disturbance, are constructed by utilising the immersion and invariance method. The mismatched term arising from the observers is dominated by the high-gain injection. The control law is a simple proportional-derivative controller plus a disturbance compensation term, where the estimates of the angular velocity and the disturbance from observers are used for feedback directly. The overall closed-loop system is shown to be almost globally asymptotically stable under easy choices of some control parameters. Finally, simulations are conducted to demonstrate the effectiveness of the proposed control scheme.

  8. In Silico Single-Molecule Manipulation of DNA with Rigid Body Dynamics

    PubMed Central

    Carrivain, Pascal; Barbi, Maria; Victor, Jean-Marc

    2014-01-01

    We develop a new powerful method to reproduce in silico single-molecule manipulation experiments. We demonstrate that flexible polymers such as DNA can be simulated using rigid body dynamics thanks to an original implementation of Langevin dynamics in an open source library called Open Dynamics Engine. We moreover implement a global thermostat which accelerates the simulation sampling by two orders of magnitude. We reproduce force-extension as well as rotation-extension curves of reference experimental studies. Finally, we extend the model to simulations where the control parameter is no longer the torsional strain but instead the torque, and predict the expected behavior for this case which is particularly challenging theoretically and experimentally. PMID:24586127

  9. Free Energy Landscapes of Alanine Oligopeptides in Rigid-Body and Hybrid Water Models.

    PubMed

    Nayar, Divya; Chakravarty, Charusita

    2015-08-27

    Replica exchange molecular dynamics is used to study the effect of different rigid-body (mTIP3P, TIP4P, SPC/E) and hybrid (H1.56, H3.00) water models on the conformational free energy landscape of the alanine oligopeptides (acAnme and acA5nme), in conjunction with the CHARMM22 force field. The free energy landscape is mapped out as a function of the Ramachandran angles. In addition, various secondary structure metrics, solvation shell properties, and the number of peptide-solvent hydrogen bonds are monitored. Alanine dipeptide is found to have similar free energy landscapes in different solvent models, an insensitivity which may be due to the absence of possibilities for forming i-(i + 4) or i-(i + 3) intrapeptide hydrogen bonds. The pentapeptide, acA5nme, where there are three intrapeptide backbone hydrogen bonds, shows a conformational free energy landscape with a much greater degree of sensitivity to the choice of solvent model, though the three rigid-body water models differ only quantitatively. The pentapeptide prefers nonhelical, non-native PPII and β-sheet populations as the solvent is changed from SPC/E to the less tetrahedral liquid (H1.56) to an LJ-like liquid (H3.00). The pentapeptide conformational order metrics indicate a preference for open, solvent-exposed, non-native structures in hybrid solvent models at all temperatures of study. The possible correlations between the properties of solvent models and secondary structure preferences of alanine oligopeptides are discussed, and the competition between intrapeptide, peptide-solvent, and solvent-solvent hydrogen bonding is shown to be crucial in the relative free energies of different conformers.

  10. Convergence of a Time-Stepping Scheme for Rigid-Body Dynamics and Resolution of Painlevé's Problem

    NASA Astrophysics Data System (ADS)

    Stewart, David E.

    This paper gives convergence theory for a new implicit time-stepping scheme for general rigid-body dynamics with Coulomb friction and purely inelastic collisions and shocks. An important consequence of this work is the proof of existence of solutions of rigid-body problems which include the famous counterexamples of Painlevé. The mathematical basis for this work is the formulation of the rigid-body problem in terms of measure differential inclusions of Moreau and Monteiro Marques. The implicit time-stepping method is based on complementarity problems, and is essentially a particular case of the algorithm described in Anitescu & Potra [2], which in turn is based on the formulation in Stewart & Trinkle [47].

  11. Molecular dynamics simulations and rigid body (TLS) analysis of aspartate carbamoyltransferase: evidence for an uncoupled R state.

    PubMed Central

    Tanner, J. J.; Smith, P. E.; Krause, K. L.

    1993-01-01

    In the R form of ATCase complexed with the bisubstrate analogue, N-(phosphonacetyl)-L-aspartate, large temperature factors are reported for the allosteric domains of the regulatory chains. We studied the conformational flexibility of the holoenzyme with molecular dynamics simulations and rigid body (TLS) analysis. The results of the molecular dynamics simulations suggest that, although local atomic fluctuations account for the temperature factors of the catalytic and zinc domains, they do not account for the large temperature factors of the allosteric regions. However, the temperature factors of the allosteric domains can be satisfactorily analyzed using a rigid body model. The simulations and rigid body analysis support the idea that the allosteric regions are mechanically uncoupled from the rest of the enzyme in the PALA structure. Implications of this uncoupling for allosteric regulation are discussed. PMID:8318897

  12. The Effect of Water Compressibility on a Rigid Body Movement in Two Phase Flow

    NASA Astrophysics Data System (ADS)

    Park, Chan Wook; Kim, Hak Sun; Lee, Sungsu

    2008-11-01

    The motion of a rigid body in a tube full of water-filled, initiated by a sudden release of highly pressurized air is simulated presuming the flow field as a two dimensional one. The effects of water compressibility on the body movement are investigated, comparing results based on the Fluent VOF model where water is treated as an incompressible medium with those from the presently developed VOF scheme. The present model considers compressibility of both air and water. The Fluent results show that the body moves farther and at higher speeds than the present ones. As time proceeds, the relative difference of speed and displacement between the two results drops substantially, after acoustic waves in water traverse and return the full length of the tube several times. To estimate instantaneous accelerations, however, requires implementation of the water compressibility effect as discrepancies between them do not decrease even after several pressure wave cycles. This work was supported by a research fund granted from Agency for Defense Development, South Korea.

  13. Real-Time Correction of Rigid-Body-Motion-Induced Phase Errors for Diffusion-Weighted Steady State Free Precession Imaging

    PubMed Central

    O’Halloran, R; Aksoy, M; Aboussouan, E; Peterson, E; Van, A; Bammer, R

    2014-01-01

    Purpose Diffusion contrast in diffusion-weighted steady state free precession MRI is generated through the constructive addition of signal from many coherence pathways. Motion-induced phase causes destructive interference which results in loss of signal magnitude and diffusion contrast. In this work, a 3D navigator-based real-time correction of the rigid-body-motion-induced phase errors is developed for diffusion-weighted steady state free precession MRI. Methods The efficacy of the real-time prospective correction method in preserving phase coherence of the steady-state is tested in 3D phantom experiments and 3D scans of healthy human subjects. Results In nearly all experiments, the signal magnitude in images obtained with proposed prospective correction was higher than the signal magnitude in images obtained with no correction. In the human subjects the mean magnitude signal in the data was up to 30 percent higher with prospective motion correction than without. Prospective correction never resulted in a decrease in mean signal magnitude in either the data or in the images. Conclusions The proposed prospective motion correction method is shown to preserve the phase coherence of the steady state in diffusion-weighted steady state free precession MRI, thus mitigating signal magnitude losses that would confound the desired diffusion contrast. PMID:24715414

  14. Error analysis of analytic solutions for self-excited near-symmetric rigid bodies - A numerical study

    NASA Technical Reports Server (NTRS)

    Kia, T.; Longuski, J. M.

    1984-01-01

    Analytic error bounds are presented for the solutions of approximate models for self-excited near-symmetric rigid bodies. The error bounds are developed for analytic solutions to Euler's equations of motion. The results are applied to obtain a simplified analytic solution for Eulerian rates and angles. The results of a sample application of the range and error bound expressions for the case of the Galileo spacecraft experiencing transverse torques demonstrate the use of the bounds in analyses of rigid body spin change maneuvers.

  15. Survey of Stereotactic Body Radiation Therapy in Japan by the Japan 3-D Conformal External Beam Radiotherapy Group

    SciTech Connect

    Nagata, Yasushi Hiraoka, Masahiro; Mizowaki, Takashi; Narita, Yuichiro; Matsuo, Yukinori; Norihisa, Yoshiki; Onishi, Hiroshi; Shirato, Hiroki

    2009-10-01

    Purpose: To recognize the current status of stereotactic body radiotherapy (SBRT) in Japan, using a nationwide survey conducted by the Japan 3-D Conformal External Beam Radiotherapy Group. Methods and Materials: The questionnaire was sent by mail to 117 institutions. Ninety-four institutions (80%) responded by the end of November 2005. Fifty-three institutions indicated that they have already started SBRT, and 38 institutions had been reimbursed by insurance. Results: A total of 1111 patients with histologically confirmed lung cancer were treated. Among these patients, 637 had T1N0M0 and 272 had T2N0M0 lung cancer. Metastatic lung cancer was found in 702 and histologically unconfirmed lung tumor in 291 patients. Primary liver cancer was found in 207 and metastatic liver cancer in 76 patients. The most frequent schedule used for primary lung cancer was 48Gy in 4 fractions at 22 institutions (52%), followed by 50Gy in 5 fractions at 11 institutions (26%) and 60Gy in 8 fractions at 4 institutions (10%). The tendency was the same for metastatic lung cancer. The average number of personnel involved in SBRT was 1.8 radiation oncologists, including 1.1 certified radiation oncologists, 2.8 technologists, 0.7 nurses, and 0.6 certified quality assurance personnel and 0.3 physicists. The most frequent amount of time for treatment planning was 61-120min, for quality assurance was 50-60min, and for treatment was 30min. There were 14 (0.6% of all cases) reported Grade 5 complications: 11 cases of radiation pneumonitis, 2 cases of hemoptysis, and 1 case of radiation esophagitis. Conclusion: The current status of SBRT in Japan was surveyed.

  16. Stability of high-frequency periodic motions of a heavy rigid body with a horizontally vibrating suspension point

    NASA Astrophysics Data System (ADS)

    Belichenko, M. V.

    2016-11-01

    The motion of a heavy rigid body one of whose points (the suspension point) executes horizontal harmonic high-frequency vibrations with small amplitude is considered. The problem of existence of high-frequency periodic motions with period equal to the period of the suspension point vibrations is considered. The stability conditions for the revealed motions are obtained in the linear approximation. The following three special cases of mass distribution in the body are considered; a body whose center of mass lies on the principal axis of inertia, a body whose center of mass lies in the principal plane of inertia, and a dynamically symmetric body.

  17. The planar restricted three-body problem when both primaries are triaxial rigid bodies: Equilibrium points and periodic orbits

    NASA Astrophysics Data System (ADS)

    Elshaboury, S. M.; Abouelmagd, Elbaz I.; Kalantonis, V. S.; Perdios, E. A.

    2016-09-01

    The restricted three-body problem when the primaries are triaxial rigid bodies is considered and its basic dynamical features are studied. In particular, the equilibrium points are identified as well as their stability is determined in the special case when the Euler angles of rotational motion are accordingly θi = ψi = π/2 and φi = π/2, i = 1, 2. It is found that three unstable collinear equilibrium points exist and two triangular such points which may be stable. Special attention has also been paid to the study of simple symmetric periodic orbits and 31 families consisting of such orbits have been determined. It has been found that only one of these families consists entirely of unstable members while the remaining families contain stable parts indicating that other families bifurcate from them. Finally, using the grid-search technique a global solution in the space of initial conditions is obtained which comprises simple and of higher multiplicities symmetric periodic orbits as well as escape and collision orbits.

  18. Implementation of VITUS 3D Whole Body Scanning for Item Size Selection & Integration to ARN Systems for Issuing at Ft. Jackson

    DTIC Science & Technology

    2004-12-27

    Human Solutions and the management staff at the CIPP to the fitters in the importance of using the recommended sizes. 3.5 Pilot Process – Initial Data...SD The WBX 3D Whole Body Scanner was installed at Marine Corps Recruit Depot during April 2001, replacing the older WB4 model put in service in 1998

  19. A few remarks about integrability of the equations of motion of a rigid body in ideal fluid

    NASA Astrophysics Data System (ADS)

    Perelomov, A. M.

    1980-11-01

    We demonstrate that the problem of motion of a rigid body in an ideal fluid for a nondegenerate case is completely integrable by means of the quadratic constants of motion for the Clebsch and Steklov cases only. We construct a Lax pair for a high-dimensional generalization of the Clebsch case.

  20. Calculation of rigid-body conformational changes using restraint-driven Cartesian transformations.

    PubMed Central

    Sompornpisut, P; Liu, Y S; Perozo, E

    2001-01-01

    We present an approach for calculating conformational changes in membrane proteins using limited distance information. The method, named restraint-driven Cartesian transformations, involves 1) the use of relative distance changes; 2) the systematic sampling of rigid body movements in Cartesian space; 3) a penalty evaluation; and 4) model refinement using energy minimization. As a test case, we have analyzed the structural basis of activation gating in the Streptomyces lividans potassium channel (KcsA). A total of 10 pairs of distance restraints derived from site-directed spin labeling and electron paramagnetic resonance (SDSL-EPR) spectra were used to calculate the open conformation of the second transmembrane domains of KcsA (TM2). The SDSL-EPR based structure reveals a gating mechanism consistent with a scissoring-type motion of the TM2 segments that includes a pivot point near middle of the helix. The present approach considerably reduces the amount of time and effort required to establish the overall nature of conformational changes in membrane proteins. It is expected that this approach can be implemented into restrained molecular dynamics protocol to calculate the structure and conformational changes in a variety of membrane protein systems. PMID:11606268

  1. A molecular viewer for the analysis of TLS rigid-body motion in macromolecules.

    PubMed

    Painter, Jay; Merritt, Ethan A

    2005-04-01

    TLS (translation/libration/screw) models describe rigid-body vibrational motions of arbitrary objects. A single-group TLS model can be used to approximate the vibration of an entire protein molecule within a crystal lattice. More complex TLS models are broadly applicable to describing inter-domain and other internal vibrational modes of proteins. Such models can be derived and refined from crystallographic data, but they can also be used to describe the vibrational modes observed through other physical techniques or derived from molecular dynamics. The use of TLS models for protein motion has been relatively limited, partly because the physical meaning of the refined TLS parameters is not intuitive. Here, a molecular viewer, TLSView, is introduced using OpenGL and based on the mmLib library for describing and manipulating macromolecular structural models. This visualization tool allows an intuitive understanding of the physical significance of TLS models derived from crystallographic or other data and may be used as an interactive tool to display and interpret inter-domain or other motions in protein structural models. TLSView may also be used to prepare, analyze and validate TLS models for crystallographic refinement.

  2. Inertial Motions of a Rigid Body with a Cavity Filled with a Viscous Liquid

    NASA Astrophysics Data System (ADS)

    Disser, Karoline; Galdi, Giovanni P.; Mazzone, Giusy; Zunino, Paolo

    2016-07-01

    We study inertial motions of the coupled system, {S}, constituted by a rigid body containing a cavity entirely filled with a viscous liquid. We show that for arbitrary initial data having only finite kinetic energy, every corresponding weak solution (à la Leray-Hopf) converges, as time goes to infinity, to a uniform rotation, unless two central moments of inertia of {S} coincide and are strictly greater than the third one. This corroborates a famous "conjecture" of N.Ye. Zhukovskii in several physically relevant cases. Moreover, we show that, in a known range of initial data, this rotation may only occur along the central axis of inertia of {S} with the larger moment of inertia. We also provide necessary and sufficient conditions for the rigorous nonlinear stability of permanent rotations, which improve and/or generalize results previously given by other authors under different types of approximation. Finally, we present results obtained by a targeted numerical simulation that, on the one hand, complement the analytical findings, whereas, on the other hand, point out new features that the analysis is yet not able to catch, and, as such, lay the foundation for interesting and challenging future investigation.

  3. A simple molecular mechanics integrator in mixed rigid body and dihedral angle space.

    PubMed

    Vitalis, Andreas; Pappu, Rohit V

    2014-07-21

    We propose a numerical scheme to integrate equations of motion in a mixed space of rigid-body and dihedral angle coordinates. The focus of the presentation is biomolecular systems and the framework is applicable to polymers with tree-like topology. By approximating the effective mass matrix as diagonal and lumping all bias torques into the time dependencies of the diagonal elements, we take advantage of the formal decoupling of individual equations of motion. We impose energy conservation independently for every degree of freedom and this is used to derive a numerical integration scheme. The cost of all auxiliary operations is linear in the number of atoms. By coupling the scheme to one of two popular thermostats, we extend the method to sample constant temperature ensembles. We demonstrate that the integrator of choice yields satisfactory stability and is free of mass-metric tensor artifacts, which is expected by construction of the algorithm. Two fundamentally different systems, viz., liquid water and an α-helical peptide in a continuum solvent are used to establish the applicability of our method to a wide range of problems. The resultant constant temperature ensembles are shown to be thermodynamically accurate. The latter relies on detailed, quantitative comparisons to data from reference sampling schemes operating on exactly the same sets of degrees of freedom.

  4. Periodic contact between piezoelectric materials and a rigid body with a wavy surface

    NASA Astrophysics Data System (ADS)

    Zhou, Yue-Ting; Kim, Tae-Won

    2015-01-01

    An exact analysis is conducted for periodic, two-dimensional (2D) contact of piezoelectric materials in contact with a rigid body with a wavy surface pressed by uniform stresses at infinity. For three cases of eigenvalue distribution, three harmonic functions automatically satisfying the periodicity conditions are carefully constructed to facilitate the derivation of the solution of the considered problem. The stresses and electric displacements are obtained as infinite series. It is found that for the full contact case, the disturbance stress and electric displacement fields remain only the first harmonic which has the slowest decay in the y-direction. The convergence behaviours of the infinite series are checked, which shows that the external loading p and different positions have a great effect on the convergence behaviours of the infinite series and 400 terms are enough to get accurate solution at each position. Numerical results are presented to justify the validity of the present derivation and show the effect of the external loading on the contact behaviours.

  5. Generalized Predictive Control of Dynamic Systems with Rigid-Body Modes

    NASA Technical Reports Server (NTRS)

    Kvaternik, Raymond G.

    2013-01-01

    Numerical simulations to assess the effectiveness of Generalized Predictive Control (GPC) for active control of dynamic systems having rigid-body modes are presented. GPC is a linear, time-invariant, multi-input/multi-output predictive control method that uses an ARX model to characterize the system and to design the controller. Although the method can accommodate both embedded (implicit) and explicit feedforward paths for incorporation of disturbance effects, only the case of embedded feedforward in which the disturbances are assumed to be unknown is considered here. Results from numerical simulations using mathematical models of both a free-free three-degree-of-freedom mass-spring-dashpot system and the XV-15 tiltrotor research aircraft are presented. In regulation mode operation, which calls for zero system response in the presence of disturbances, the simulations showed reductions of nearly 100%. In tracking mode operations, where the system is commanded to follow a specified path, the GPC controllers produced the desired responses, even in the presence of disturbances.

  6. Respiratory motion correction in gated cardiac SPECT using quaternion-based, rigid-body registration.

    PubMed

    Parker, Jason G; Mair, Bernard A; Gilland, David R

    2009-10-01

    In this article, a new method is introduced for estimating the motion of the heart due to respiration in gated cardiac SPECT using a rigid-body model with rotation parametrized by a unit quaternion. The method is based on minimizing the sum of squared errors between the reference and the deformed frames resulting from the usual optical flow constraint by using an optimized conjugate gradient routine. This method does not require any user-defined parameters or penalty terms, which simplifies its use in a clinical setting. Using a mathematical phantom, the method was quantitatively compared to the principal axis method, as well as an iterative method in which the rotation matrix was represented by Euler angles. The quaternion-based method was shown to be substantially more accurate and robust across a wide range of extramyocardial activity levels than the principal axis method. Compared with the Euler angle representation, the quaternion-based method resulted in similar accuracy but a significant reduction in computation times. Finally, the quaternion-based method was investigated using a respiratory-gated cardiac SPECT acquisition of a human subject. The motion-corrected image has increased sharpness and myocardial uniformity compared to the uncorrected image.

  7. A simple molecular mechanics integrator in mixed rigid body and dihedral angle space

    PubMed Central

    Vitalis, Andreas; Pappu, Rohit V.

    2014-01-01

    We propose a numerical scheme to integrate equations of motion in a mixed space of rigid-body and dihedral angle coordinates. The focus of the presentation is biomolecular systems and the framework is applicable to polymers with tree-like topology. By approximating the effective mass matrix as diagonal and lumping all bias torques into the time dependencies of the diagonal elements, we take advantage of the formal decoupling of individual equations of motion. We impose energy conservation independently for every degree of freedom and this is used to derive a numerical integration scheme. The cost of all auxiliary operations is linear in the number of atoms. By coupling the scheme to one of two popular thermostats, we extend the method to sample constant temperature ensembles. We demonstrate that the integrator of choice yields satisfactory stability and is free of mass-metric tensor artifacts, which is expected by construction of the algorithm. Two fundamentally different systems, viz., liquid water and an α-helical peptide in a continuum solvent are used to establish the applicability of our method to a wide range of problems. The resultant constant temperature ensembles are shown to be thermodynamically accurate. The latter relies on detailed, quantitative comparisons to data from reference sampling schemes operating on exactly the same sets of degrees of freedom. PMID:25053299

  8. Rigid body Brownian dynamics as a tool for studying ion channel blockers.

    PubMed

    Gordon, Dan; Chen, Rong; Ho, Junming; Coote, Michelle L; Chung, Shin-Ho

    2012-02-16

    Using a novel rigid body Brownian dynamics algorithm, we investigate how a spherically asymmetrical polyamine molecule, a branched analogue of spermine, interacts with the external vestibule of the voltage-gated potassium channel, Kv1.2. Simulations reveal that the blocker, with a charge of +4e, inserts one of its charged amine groups into the selectivity filter, while another forms a salt bridge with an aspartate residue located just outside the entrance of the pore. This binding mode mimics features of the binding of polypeptides such as the scorpion venom charybdotoxin to the channel. The potential of mean force constructed with Brownian dynamics is a reasonable match to that obtained from molecular dynamics simulations, with dissociation constants of 4.7 and 22 μM, respectively. The current-voltage relationships obtained with and without a blocker in the external reservoir show that the inward current is severely attenuated by the presence of the blocker, whereas the outward current is only moderately reduced. The computational molecular modeling technique we introduce here can provide detailed insights into ligand-channel interactions and can be used for rapidly screening potential blocker molecules.

  9. Fullrmc, a rigid body reverse monte carlo modeling package enabled with machine learning and artificial intelligence

    DOE PAGES

    Aoun, Bachir

    2016-01-22

    Here, a new Reverse Monte Carlo (RMC) package ‘fullrmc’ for atomic or rigid body and molecular, amorphous or crystalline materials is presented. fullrmc main purpose is to provide a fully modular, fast and flexible software, thoroughly documented, complex molecules enabled, written in a modern programming language (python, cython ,C and C++ when performance is needed) and complying to modern programming practices. fullrmc approach in solving an atomic or molecular structure is different from existing RMC algorithms and software. In a nutshell, traditional RMC methods and software randomly adjust atom positions until the whole system has the greatest consistency with amore » set of experimental data. In contrast, fullrmc applies smart moves endorsed with reinforcement machine learning to groups of atoms. While fullrmc allows running traditional RMC modelling, the uniqueness of this approach resides in its ability to customize grouping atoms in any convenient way with no additional programming efforts and to apply smart and more physically meaningful moves to the defined groups of atoms. Also fullrmc provides a unique way with almost no additional computational cost to recur a group’s selection, allowing the system to go out of local minimas by refining a group’s position or exploring through and beyond not allowed positions and energy barriers the unrestricted three dimensional space around a group.« less

  10. Fullrmc, a rigid body reverse monte carlo modeling package enabled with machine learning and artificial intelligence

    SciTech Connect

    Aoun, Bachir

    2016-01-22

    Here, a new Reverse Monte Carlo (RMC) package ‘fullrmc’ for atomic or rigid body and molecular, amorphous or crystalline materials is presented. fullrmc main purpose is to provide a fully modular, fast and flexible software, thoroughly documented, complex molecules enabled, written in a modern programming language (python, cython ,C and C++ when performance is needed) and complying to modern programming practices. fullrmc approach in solving an atomic or molecular structure is different from existing RMC algorithms and software. In a nutshell, traditional RMC methods and software randomly adjust atom positions until the whole system has the greatest consistency with a set of experimental data. In contrast, fullrmc applies smart moves endorsed with reinforcement machine learning to groups of atoms. While fullrmc allows running traditional RMC modelling, the uniqueness of this approach resides in its ability to customize grouping atoms in any convenient way with no additional programming efforts and to apply smart and more physically meaningful moves to the defined groups of atoms. Also fullrmc provides a unique way with almost no additional computational cost to recur a group’s selection, allowing the system to go out of local minimas by refining a group’s position or exploring through and beyond not allowed positions and energy barriers the unrestricted three dimensional space around a group.

  11. Alternating Access in Maltose Transporter Mediated by Rigid-Body Rotations

    SciTech Connect

    Khare, Dheeraj; Oldham, Michael L.; Orelle, Cedric; Davidson, Amy L.; Chen, Jue; Purdue

    2010-07-27

    ATP-binding cassette transporters couple ATP hydrolysis to substrate translocation through an alternating access mechanism, but the nature of the conformational changes in a transport cycle remains elusive. Previously we reported the structure of the maltose transporter MalFGK{sub 2} in an outward-facing conformation in which the transmembrane (TM) helices outline a substrate-binding pocket open toward the periplasmic surface and ATP is poised for hydrolysis along the closed nucleotide-binding dimer interface. Here we report the structure of the nucleotide-free maltose transporter in which the substrate binding pocket is only accessible from the cytoplasm and the nucleotide-binding interface is open. Comparison of the same transporter crystallized in two different conformations reveals that alternating access involves rigid-body rotations of the TM subdomains that are coupled to the closure and opening of the nucleotide-binding domain interface. The comparison also reveals that point mutations enabling binding protein-independent transport line dynamic interfaces in the TM region.

  12. Respiratory motion correction in gated cardiac SPECT using quaternion-based, rigid-body registration

    PubMed Central

    Parker, Jason G.; Mair, Bernard A.; Gilland, David R.

    2009-01-01

    In this article, a new method is introduced for estimating the motion of the heart due to respiration in gated cardiac SPECT using a rigid-body model with rotation parametrized by a unit quaternion. The method is based on minimizing the sum of squared errors between the reference and the deformed frames resulting from the usual optical flow constraint by using an optimized conjugate gradient routine. This method does not require any user-defined parameters or penalty terms, which simplifies its use in a clinical setting. Using a mathematical phantom, the method was quantitatively compared to the principal axis method, as well as an iterative method in which the rotation matrix was represented by Euler angles. The quaternion-based method was shown to be substantially more accurate and robust across a wide range of extramyocardial activity levels than the principal axis method. Compared with the Euler angle representation, the quaternion-based method resulted in similar accuracy but a significant reduction in computation times. Finally, the quaternion-based method was investigated using a respiratory-gated cardiac SPECT acquisition of a human subject. The motion-corrected image has increased sharpness and myocardial uniformity compared to the uncorrected image. PMID:19928105

  13. Stiffness-generated rigid-body mode shapes for Lanczos eigensolution with SUPORT DOF by way of a MSC/NASTRAN DMAP alter

    NASA Technical Reports Server (NTRS)

    Abdallah, Ayman A.; Barnett, Alan R.; Widrick, Timothy W.; Manella, Richard T.; Miller, Robert P.

    1994-01-01

    When using all MSC/NASTRAN eigensolution methods except Lanczos, the analyst can replace the coupled system rigid-body modes calculated within DMAP module READ with mass orthogonalized and normalized rigid-body modes generated from the system stiffness. This option is invoked by defining MSC/NASTRAN r-set degrees of freedom via the SUPORT bulk data card. The newly calculated modes are required if the rigid-body modes calculated by the eigensolver are not 'clean' due to numerical roundoffs in the solution. When performing transient structural dynamic load analysis, the numerical roundoffs can result in inaccurate rigid-body accelerations which affect steady-state responses. Unfortunately, when using the Lanczos method and defining r-set degrees of freedom, the rigid-body modes calculated within DMAP module REIGL are retained. To overcome this limitation and to allow MSC/NASTRAN to handle SUPORT degrees of freedom identically for all eigensolvers, a DMAP Alter has been written which replaces Lanczos-calculated rigid-body modes with stiffness-generated rigid-body modes. The newly generated rigid-body modes are normalized with respect to the system mass and orthogonalized using the Gram-Schmidt technique. This algorithm has been implemented as an enhancement to an existing coupled loads methodology.

  14. SU-E-J-200: A Dosimetric Analysis of 3D Versus 4D Image-Based Dose Calculation for Stereotactic Body Radiation Therapy in Lung Tumors

    SciTech Connect

    Ma, M; Rouabhi, O; Flynn, R; Xia, J; Bayouth, J

    2014-06-01

    Purpose: To evaluate the dosimetric difference between 3D and 4Dweighted dose calculation using patient specific respiratory trace and deformable image registration for stereotactic body radiation therapy in lung tumors. Methods: Two dose calculation techniques, 3D and 4D-weighed dose calculation, were used for dosimetric comparison for 9 lung cancer patients. The magnitude of the tumor motion varied from 3 mm to 23 mm. Breath-hold exhale CT was used for 3D dose calculation with ITV generated from the motion observed from 4D-CT. For 4D-weighted calculation, dose of each binned CT image from the ten breathing amplitudes was first recomputed using the same planning parameters as those used in the 3D calculation. The dose distribution of each binned CT was mapped to the breath-hold CT using deformable image registration. The 4D-weighted dose was computed by summing the deformed doses with the temporal probabilities calculated from their corresponding respiratory traces. Dosimetric evaluation criteria includes lung V20, mean lung dose, and mean tumor dose. Results: Comparing with 3D calculation, lung V20, mean lung dose, and mean tumor dose using 4D-weighted dose calculation were changed by −0.67% ± 2.13%, −4.11% ± 6.94% (−0.36 Gy ± 0.87 Gy), −1.16% ± 1.36%(−0.73 Gy ± 0.85 Gy) accordingly. Conclusion: This work demonstrates that conventional 3D dose calculation method may overestimate the lung V20, MLD, and MTD. The absolute difference between 3D and 4D-weighted dose calculation in lung tumor may not be clinically significant. This research is supported by Siemens Medical Solutions USA, Inc and Iowa Center for Research By Undergraduates.

  15. A microwave imaging-based 3D localization algorithm for an in-body RF source as in wireless capsule endoscopes.

    PubMed

    Chandra, Rohit; Balasingham, Ilangko

    2015-01-01

    A microwave imaging-based technique for 3D localization of an in-body RF source is presented. Such a technique can be useful for localization of an RF source as in wireless capsule endoscopes for positioning of any abnormality in the gastrointestinal tract. Microwave imaging is used to determine the dielectric properties (relative permittivity and conductivity) of the tissues that are required for a precise localization. A 2D microwave imaging algorithm is used for determination of the dielectric properties. Calibration method is developed for removing any error due to the used 2D imaging algorithm on the imaging data of a 3D body. The developed method is tested on a simple 3D heterogeneous phantom through finite-difference-time-domain simulations. Additive white Gaussian noise at the signal-to-noise ratio of 30 dB is added to the simulated data to make them more realistic. The developed calibration method improves the imaging and the localization accuracy. Statistics on the localization accuracy are generated by randomly placing the RF source at various positions inside the small intestine of the phantom. The cumulative distribution function of the localization error is plotted. In 90% of the cases, the localization accuracy was found within 1.67 cm, showing the capability of the developed method for 3D localization.

  16. Arterial Mechanical Motion Estimation Based on a Semi-Rigid Body Deformation Approach

    PubMed Central

    Guzman, Pablo; Hamarneh, Ghassan; Ros, Rafael; Ros, Eduardo

    2014-01-01

    Arterial motion estimation in ultrasound (US) sequences is a hard task due to noise and discontinuities in the signal derived from US artifacts. Characterizing the mechanical properties of the artery is a promising novel imaging technique to diagnose various cardiovascular pathologies and a new way of obtaining relevant clinical information, such as determining the absence of dicrotic peak, estimating the Augmentation Index (AIx), the arterial pressure or the arterial stiffness. One of the advantages of using US imaging is the non-invasive nature of the technique unlike Intra Vascular Ultra Sound (IVUS) or angiography invasive techniques, plus the relative low cost of the US units. In this paper, we propose a semi rigid deformable method based on Soft Bodies dynamics realized by a hybrid motion approach based on cross-correlation and optical flow methods to quantify the elasticity of the artery. We evaluate and compare different techniques (for instance optical flow methods) on which our approach is based. The goal of this comparative study is to identify the best model to be used and the impact of the accuracy of these different stages in the proposed method. To this end, an exhaustive assessment has been conducted in order to decide which model is the most appropriate for registering the variation of the arterial diameter over time. Our experiments involved a total of 1620 evaluations within nine simulated sequences of 84 frames each and the estimation of four error metrics. We conclude that our proposed approach obtains approximately 2.5 times higher accuracy than conventional state-of-the-art techniques. PMID:24871987

  17. Lie theory, Riemannian geometry, and the dynamics of coupled rigid bodies

    NASA Astrophysics Data System (ADS)

    Park, F. C.; Kim, M. W.

    In this article we formulate, in a Lie group setting, the equations of motion for a system of n coupled rigid bodies subject to holonomic constraints. A mapping f: { l {M} -> l {N} is constructed, where l M is the m-dimensional configuration manifold of the system, and l{N} = {SE(3)} × ots × {SE(3)} (n copies) is endowed with the left-invariant Riemannian metric h corresponding to the total kinetic energy of the system, where SE(3) is the special Euclidean group. The generalized inertia tensor of the system is given by the pullback metric f*h; the equations of motion are then the geodesic equations on l M with respect to this metric. We show how this coordinate-free formulation leads directly to a factorization of the generalized inertia tensor of the form {l S}T {l L}T {l H} {l L} {l S}, where l S is a constant block-diagonal matrix consisting only of kinematic parameters, H is a constant block-diagonal matrix consisting only of inertial parameters, and {l L} is a block lower-triangular matrix composed of Adjoint operators on se(3). Such a factorization is useful for various multibody system dynamics applications, e.g., inertial parameter identification, adaptive control, and design optimization. We also show how in many practical situations {l N} can be reduced to a submanifold, thereby considerably simplifying the derivation of the equations of motion. Our geometric formulation not only suggests ways to choose the best coordinates for analysis and computation, but also provides high-level insight into the structure of the equations of motion.

  18. Acoustic equations for a gas stream in rigid-body rotation

    NASA Astrophysics Data System (ADS)

    Garcia-Ybarra, Pedro L.; Marin-Antuña, Jose M.

    2017-02-01

    The classical topic of wave propagation in a rotating gas is revisited by deducing scalar wave equations for propagation of acoustic and rotational waves through a plug flow of gas in rigid-body rotation with arbitrary intensities of the radial stratification. In the light of these novel equations, wave propagation is analyzed in two different base gas states: isothermal and homentropic. In both cases, previous findings are recovered that assess the validity of the equations and new results are established. In the non-homentropic but isothermal case, the set of governing equations is reduced to two coupled scalar wave equations with space dependent coefficients for the disturbances of density and pressure. Travelling wave solutions with variable amplitude have been obtained in the limit of weak stratification both for inertial waves as for acoustic waves which, in general, propagate on different frequency bands that overlap in the small wavenumber region. Furthermore, the entropy stratification in the base state is stable and compels the propagation of internal waves, leading to hybrid acoustic-inertial-vortical modes. In the homentropic case, the adiabatic relation between pressure and density disturbances allows to reduce further the governing equations to a single fourth-order scalar wave equation. In this case, the sound propagation velocity depends on the distance to the rotation axis and solutions are found by multiple-scale analyses in the form of waves with slowly varying amplitude and wavenumber. The corresponding eikonal equation shows that acoustic rays are refracted towards the rotation axis, propagating and spinning along and around it. In that way, the swirling gas behaves as an axial waveguide trapping inside any acoustic ray propagating in the vortex with large enough azimuthal and/or vertical wavenumber component.

  19. Assessment of a Microsoft Kinect-based 3D scanning system for taking body segment girth measurements: a comparison to ISAK and ISO standards.

    PubMed

    Clarkson, Sean; Wheat, Jon; Heller, Ben; Choppin, Simon

    2016-01-01

    Use of anthropometric data to infer sporting performance is increasing in popularity, particularly within elite sport programmes. Measurement typically follows standards set by the International Society for the Advancement of Kinanthropometry (ISAK). However, such techniques are time consuming, which reduces their practicality. Schranz et al. recently suggested 3D body scanners could replace current measurement techniques; however, current systems are costly. Recent interest in natural user interaction has led to a range of low-cost depth cameras capable of producing 3D body scans, from which anthropometrics can be calculated. A scanning system comprising 4 depth cameras was used to scan 4 cylinders, representative of the body segments. Girth measurements were calculated from the 3D scans and compared to gold standard measurements. Requirements of a Level 1 ISAK practitioner were met in all 4 cylinders, and ISO standards for scan-derived girth measurements were met in the 2 larger cylinders only. A fixed measurement bias was identified that could be corrected with a simple offset factor. Further work is required to determine comparable performance across a wider range of measurements performed upon living participants. Nevertheless, findings of the study suggest such a system offers many advantages over current techniques, having a range of potential applications.

  20. SU-C-213-04: Application of Depth Sensing and 3D-Printing Technique for Total Body Irradiation (TBI) Patient Measurement and Treatment Planning

    SciTech Connect

    Lee, M; Suh, T; Han, B; Xing, L; Jenkins, C

    2015-06-15

    Purpose: To develop and validate an innovative method of using depth sensing cameras and 3D printing techniques for Total Body Irradiation (TBI) treatment planning and compensator fabrication. Methods: A tablet with motion tracking cameras and integrated depth sensing was used to scan a RANDOTM phantom arranged in a TBI treatment booth to detect and store the 3D surface in a point cloud (PC) format. The accuracy of the detected surface was evaluated by comparison to extracted measurements from CT scan images. The thickness, source to surface distance and off-axis distance of the phantom at different body section was measured for TBI treatment planning. A 2D map containing a detailed compensator design was calculated to achieve uniform dose distribution throughout the phantom. The compensator was fabricated using a 3D printer, silicone molding and tungsten powder. In vivo dosimetry measurements were performed using optically stimulated luminescent detectors (OSLDs). Results: The whole scan of the anthropomorphic phantom took approximately 30 seconds. The mean error for thickness measurements at each section of phantom compare to CT was 0.44 ± 0.268 cm. These errors resulted in approximately 2% dose error calculation and 0.4 mm tungsten thickness deviation for the compensator design. The accuracy of 3D compensator printing was within 0.2 mm. In vivo measurements for an end-to-end test showed the overall dose difference was within 3%. Conclusion: Motion cameras and depth sensing techniques proved to be an accurate and efficient tool for TBI patient measurement and treatment planning. 3D printing technique improved the efficiency and accuracy of the compensator production and ensured a more accurate treatment delivery.

  1. Stability of the classical type of relative equilibria of a rigid body in the J 2 problem

    NASA Astrophysics Data System (ADS)

    Wang, Yue; Xu, Shijie

    2013-08-01

    The motion of a point mass in the J 2 problem is generalized to that of a rigid body in a J 2 gravity field. The linear and nonlinear stability of the classical type of relative equilibria of the rigid body, which have been obtained in our previous paper, are studied in the framework of geometric mechanics with the second-order gravitational potential. Non-canonical Hamiltonian structure of the problem, i.e., Poisson tensor, Casimir functions and equations of motion, are obtained through a Poisson reduction process by means of the symmetry of the problem. The linear system matrix at the relative equilibria is given through the multiplication of the Poisson tensor and Hessian matrix of the variational Lagrangian. Based on the characteristic equation of the linear system matrix, the conditions of linear stability of the relative equilibria are obtained. The conditions of nonlinear stability of the relative equilibria are derived with the energy-Casimir method through the projected Hessian matrix of the variational Lagrangian. With the stability conditions obtained, both the linear and nonlinear stability of the relative equilibria are investigated in details in a wide range of the parameters of the gravity field and the rigid body. We find that both the zonal harmonic J 2 and the characteristic dimension of the rigid body have significant effects on the linear and nonlinear stability. Similar to the classical attitude stability in a central gravity field, the linear stability region is also consisted of two regions that are analogues of the Lagrange region and the DeBra-Delp region respectively. The nonlinear stability region is the subset of the linear stability region in the first quadrant that is the analogue of the Lagrange region. Our results are very useful for the studies on the motion of natural satellites in our solar system.

  2. A vector-dyadic development of the equations of motion for N-coupled rigid bodies and point masses

    NASA Technical Reports Server (NTRS)

    Frisch, H. P.

    1974-01-01

    The equations of motion are derived, in vector-dyadic format, for a topological tree of coupled rigid bodies, point masses, and symmetrical momentum wheels. These equations were programmed, and form the basis for the general-purpose digital computer program N-BOD. A complete derivation of the equations of motion is included along with a description of the methods used for kinematics, constraint elimination, and for the inclusion of nongyroscope forces and torques acting external or internal to the system.

  3. 4D human body posture estimation based on a motion capture system and a multi-rigid link model.

    PubMed

    Yoshikawa, Naoya; Suzuki, Yasuyuki; Ozaki, Wataru; Yamamoto, Tomohisa; Nomura, Taishin

    2012-01-01

    Human motion analysis in various fields such as neurophysiology, clinical medicine, and sports sciences utilizes a multi-rigid link model of a human body for considering kinetics by solving inverse dynamics of a motion, in which a motion capture system with reflective markers are often used to measure the motion, and then the obtained motion are mapped onto the multi-rigid link model. However, algorithms for such a mapping from spatio-temporal positions of the markers to the corresponding posture of the model are not always fully disclosed. Moreover, a common difficulty for such algorithms is an error caused by displacements of the markers attached on the body surface, referred to as the skin motion error. In this study, we developed a simple algorithm that maps positions of the markers to the corresponding posture of a rigid link model, and examined accuracy of the algorithm by evaluating quantitatively differences between the measured and the estimated posture. We also analyzed the skin motion error. It is shown that magnitude of the error was determined not only by the amplitude of the skin motion, but also by the direction of the marker displacement relative to the frame of reference attached to each segment of the body.

  4. Fully Automatic Localization and Segmentation of 3D Vertebral Bodies from CT/MR Images via a Learning-Based Method.

    PubMed

    Chu, Chengwen; Belavý, Daniel L; Armbrecht, Gabriele; Bansmann, Martin; Felsenberg, Dieter; Zheng, Guoyan

    2015-01-01

    In this paper, we address the problems of fully automatic localization and segmentation of 3D vertebral bodies from CT/MR images. We propose a learning-based, unified random forest regression and classification framework to tackle these two problems. More specifically, in the first stage, the localization of 3D vertebral bodies is solved with random forest regression where we aggregate the votes from a set of randomly sampled image patches to get a probability map of the center of a target vertebral body in a given image. The resultant probability map is then further regularized by Hidden Markov Model (HMM) to eliminate potential ambiguity caused by the neighboring vertebral bodies. The output from the first stage allows us to define a region of interest (ROI) for the segmentation step, where we use random forest classification to estimate the likelihood of a voxel in the ROI being foreground or background. The estimated likelihood is combined with the prior probability, which is learned from a set of training data, to get the posterior probability of the voxel. The segmentation of the target vertebral body is then done by a binary thresholding of the estimated probability. We evaluated the present approach on two openly available datasets: 1) 3D T2-weighted spine MR images from 23 patients and 2) 3D spine CT images from 10 patients. Taking manual segmentation as the ground truth (each MR image contains at least 7 vertebral bodies from T11 to L5 and each CT image contains 5 vertebral bodies from L1 to L5), we evaluated the present approach with leave-one-out experiments. Specifically, for the T2-weighted MR images, we achieved for localization a mean error of 1.6 mm, and for segmentation a mean Dice metric of 88.7% and a mean surface distance of 1.5 mm, respectively. For the CT images we achieved for localization a mean error of 1.9 mm, and for segmentation a mean Dice metric of 91.0% and a mean surface distance of 0.9 mm, respectively.

  5. Fully Automatic Localization and Segmentation of 3D Vertebral Bodies from CT/MR Images via a Learning-Based Method

    PubMed Central

    Chu, Chengwen; Belavý, Daniel L.; Armbrecht, Gabriele; Bansmann, Martin; Felsenberg, Dieter; Zheng, Guoyan

    2015-01-01

    In this paper, we address the problems of fully automatic localization and segmentation of 3D vertebral bodies from CT/MR images. We propose a learning-based, unified random forest regression and classification framework to tackle these two problems. More specifically, in the first stage, the localization of 3D vertebral bodies is solved with random forest regression where we aggregate the votes from a set of randomly sampled image patches to get a probability map of the center of a target vertebral body in a given image. The resultant probability map is then further regularized by Hidden Markov Model (HMM) to eliminate potential ambiguity caused by the neighboring vertebral bodies. The output from the first stage allows us to define a region of interest (ROI) for the segmentation step, where we use random forest classification to estimate the likelihood of a voxel in the ROI being foreground or background. The estimated likelihood is combined with the prior probability, which is learned from a set of training data, to get the posterior probability of the voxel. The segmentation of the target vertebral body is then done by a binary thresholding of the estimated probability. We evaluated the present approach on two openly available datasets: 1) 3D T2-weighted spine MR images from 23 patients and 2) 3D spine CT images from 10 patients. Taking manual segmentation as the ground truth (each MR image contains at least 7 vertebral bodies from T11 to L5 and each CT image contains 5 vertebral bodies from L1 to L5), we evaluated the present approach with leave-one-out experiments. Specifically, for the T2-weighted MR images, we achieved for localization a mean error of 1.6 mm, and for segmentation a mean Dice metric of 88.7% and a mean surface distance of 1.5 mm, respectively. For the CT images we achieved for localization a mean error of 1.9 mm, and for segmentation a mean Dice metric of 91.0% and a mean surface distance of 0.9 mm, respectively. PMID:26599505

  6. Determination of time of death in forensic science via a 3-D whole body heat transfer model.

    PubMed

    Bartgis, Catherine; LeBrun, Alexander M; Ma, Ronghui; Zhu, Liang

    2016-12-01

    This study is focused on developing a whole body heat transfer model to accurately simulate temperature decay in a body postmortem. The initial steady state temperature field is simulated first and the calculated weighted average body temperature is used to determine the overall heat transfer coefficient at the skin surface, based on thermal equilibrium before death. The transient temperature field postmortem is then simulated using the same boundary condition and the temperature decay curves at several body locations are generated for a time frame of 24h. For practical purposes, curve fitting techniques are used to replace the simulations with a proposed exponential formula with an initial time delay. It is shown that the obtained temperature field in the human body agrees very well with that in the literature. The proposed exponential formula provides an excellent fit with an R(2) value larger than 0.998. For the brain and internal organ sites, the initial time delay varies from 1.6 to 2.9h, when the temperature at the measuring site does not change significantly from its original value. The curve-fitted time constant provides the measurement window after death to be between 8h and 31h if the brain site is used, while it increases 60-95% at the internal organ site. The time constant is larger when the body is exposed to colder air, since a person usually wears more clothing when it is cold outside to keep the body warm and comfortable. We conclude that a one-size-fits-all approach would lead to incorrect estimation of time of death and it is crucial to generate a database of cooling curves taking into consideration all the important factors such as body size and shape, environmental conditions, etc., therefore, leading to accurate determination of time of death.

  7. Faceless identification: a model for person identification using the 3D shape and 3D motion as cues

    NASA Astrophysics Data System (ADS)

    Klasen, Lena M.; Li, Haibo

    1999-02-01

    Person identification by using biometric methods based on image sequences, or still images, often requires a controllable and cooperative environment during the image capturing stage. In the forensic case the situation is more likely to be the opposite. In this work we propose a method that makes use of the anthropometry of the human body and human actions as cues for identification. Image sequences from surveillance systems are used, which can be seen as monocular image sequences. A 3D deformable wireframe body model is used as a platform to handle the non-rigid information of the 3D shape and 3D motion of the human body from the image sequence. A recursive method for estimating global motion and local shape variations is presented, using two recursive feedback systems.

  8. Experimental evaluations of the accuracy of 3D and 4D planning in robotic tracking stereotactic body radiotherapy for lung cancers

    SciTech Connect

    Chan, Mark K. H.; Kwong, Dora L. W.; Ng, Sherry C. Y.; Tong, Anthony S. M.; Tam, Eric K. W.

    2013-04-15

    Purpose: Due to the complexity of 4D target tracking radiotherapy, the accuracy of this treatment strategy should be experimentally validated against established standard 3D technique. This work compared the accuracy of 3D and 4D dose calculations in respiration tracking stereotactic body radiotherapy (SBRT). Methods: Using the 4D planning module of the CyberKnife treatment planning system, treatment plans for a moving target and a static off-target cord structure were created on different four-dimensional computed tomography (4D-CT) datasets of a thorax phantom moving in different ranges. The 4D planning system used B-splines deformable image registrations (DIR) to accumulate dose distributions calculated on different breathing geometries, each corresponding to a static 3D-CT image of the 4D-CT dataset, onto a reference image to compose a 4D dose distribution. For each motion, 4D optimization was performed to generate a 4D treatment plan of the moving target. For comparison with standard 3D planning, each 4D plan was copied to the reference end-exhale images and a standard 3D dose calculation was followed. Treatment plans of the off-target structure were first obtained by standard 3D optimization on the end-exhale images. Subsequently, they were applied to recalculate the 4D dose distributions using DIRs. All dose distributions that were initially obtained using the ray-tracing algorithm with equivalent path-length heterogeneity correction (3D{sub EPL} and 4D{sub EPL}) were recalculated by a Monte Carlo algorithm (3D{sub MC} and 4D{sub MC}) to further investigate the effects of dose calculation algorithms. The calculated 3D{sub EPL}, 3D{sub MC}, 4D{sub EPL}, and 4D{sub MC} dose distributions were compared to measurements by Gafchromic EBT2 films in the axial and coronal planes of the moving target object, and the coronal plane for the static off-target object based on the {gamma} metric at 5%/3mm criteria ({gamma}{sub 5%/3mm}). Treatment plans were considered

  9. Development of microgravity, full body functional reach envelope using 3-D computer graphic models and virtual reality technology

    NASA Technical Reports Server (NTRS)

    Lindsey, Patricia F.

    1994-01-01

    In microgravity conditions mobility is greatly enhanced and body stability is difficult to achieve. Because of these difficulties, optimum placement and accessibility of objects and controls can be critical to required tasks on board shuttle flights or on the proposed space station. Anthropometric measurement of the maximum reach of occupants of a microgravity environment provide knowledge about maximum functional placement for tasking situations. Calculations for a full body, functional reach envelope for microgravity environments are imperative. To this end, three dimensional computer modeled human figures, providing a method of anthropometric measurement, were used to locate the data points that define the full body, functional reach envelope. Virtual reality technology was utilized to enable an occupant of the microgravity environment to experience movement within the reach envelope while immersed in a simulated microgravity environment.

  10. Digital anthropomorphic phantoms of non-rigid human respiratory and voluntary body motion for investigating motion correction in emission imaging

    NASA Astrophysics Data System (ADS)

    Könik, Arda; Connolly, Caitlin M.; Johnson, Karen L.; Dasari, Paul; Segars, Paul W.; Pretorius, P. H.; Lindsay, Clifford; Dey, Joyoni; King, Michael A.

    2014-07-01

    The development of methods for correcting patient motion in emission tomography has been receiving increased attention. Often the performance of these methods is evaluated through simulations using digital anthropomorphic phantoms, such as the commonly used extended cardiac torso (XCAT) phantom, which models both respiratory and cardiac motion based on human studies. However, non-rigid body motion, which is frequently seen in clinical studies, is not present in the standard XCAT phantom. In addition, respiratory motion in the standard phantom is limited to a single generic trend. In this work, to obtain a more realistic representation of motion, we developed a series of individual-specific XCAT phantoms, modeling non-rigid respiratory and non-rigid body motions derived from the magnetic resonance imaging (MRI) acquisitions of volunteers. Acquisitions were performed in the sagittal orientation using the Navigator methodology. Baseline (no motion) acquisitions at end-expiration were obtained at the beginning of each imaging session for each volunteer. For the body motion studies, MRI was again acquired only at end-expiration for five body motion poses (shoulder stretch, shoulder twist, lateral bend, side roll, and axial slide). For the respiratory motion studies, an MRI was acquired during free/regular breathing. The magnetic resonance slices were then retrospectively sorted into 14 amplitude-binned respiratory states, end-expiration, end-inspiration, six intermediary states during inspiration, and six during expiration using the recorded Navigator signal. XCAT phantoms were then generated based on these MRI data by interactive alignment of the organ contours of the XCAT with the MRI slices using a graphical user interface. Thus far we have created five body motion and five respiratory motion XCAT phantoms from the MRI acquisitions of six healthy volunteers (three males and three females). Non-rigid motion exhibited by the volunteers was reflected in both respiratory

  11. Numerical model (switchable/dual model) of the human head for rigid body and finite elements applications.

    PubMed

    Tabacu, Stefan

    2015-01-01

    In this paper, a methodology for the development and validation of a numerical model of the human head using generic procedures is presented. All steps required, starting with the model generation, model validation and applications will be discussed. The proposed model may be considered as a dual one due to its capabilities to switch from deformable to a rigid body according to the application's requirements. The first step is to generate the numerical model of the human head using geometry files or medical images. The required stiffness and damping for the elastic connection used for the rigid body model are identified by performing a natural frequency analysis. The presented applications for model validation are related to impact analysis. The first case is related to Nahum's (Nahum and Smith 1970) experiments pressure data being evaluated and a pressure map generated using the results from discrete elements. For the second case, the relative displacement between the brain and the skull is evaluated according to Hardy's (Hardy WH, Foster CD, Mason, MJ, Yang KH, King A, Tashman S. 2001.Investigation of head injury mechanisms using neutral density technology and high-speed biplanar X-ray. Stapp Car Crash J. 45:337-368, SAE Paper 2001-22-0016) experiments. The main objective is to validate the rigid model as a quick and versatile tool for acquiring the input data for specific brain analyses.

  12. Unstructured grid solutions to a wing/pylon/store configuration using VGRID3D/USM3D

    NASA Technical Reports Server (NTRS)

    Parikh, Paresh; Pirzadeh, Shahyar; Frink, Neal T.

    1992-01-01

    The purpose of this paper is to validate an inviscid flow solution package based on a new unstructured grid methodology using experimental data on a wing/pylon/store configuration. The solution package consists of an advancing front unstructured grid generator, VGRID3D, and an efficient Euler equation solver, USM3D. Comparisons of computed data versus experimental data are made for two free-stream Mach numbers at five store locations relative to the wing. Both rigid body aerodynamics and mutual interference effects are explored. A very good agreement is observed between computed and wind tunnel data.

  13. Numerical simulations of impacts involving porous bodies. I. Implementing sub-resolution porosity in a 3D SPH hydrocode

    NASA Astrophysics Data System (ADS)

    Jutzi, Martin; Benz, Willy; Michel, Patrick

    2008-11-01

    In this paper, we extend our Smooth Particle Hydrodynamics (SPH) impact code to include the effect of porosity at a sub-resolution scale by adapting the so-called P-alpha model. Many small bodies in the different populations of asteroids and comets are believed to contain a high degree of porosity and the determination of both their collisional evolution and the outcome of their disruption requires that the effect of porosity is taken into account in the computation of those processes. Here, we present our model and show how porosity interfaces with the elastic-perfectly plastic material description and the brittle fracture model generally used to simulate the fragmentation of non-porous rocky bodies. We investigate various compaction models and discuss their suitability to simulate the compaction of (highly) porous material. Then, we perform simple test cases where we compare results of the simulations to the theoretical solutions. We also present a Deep Impact-like simulation to show the effect of porosity on the outcome of an impact. Detailed validation tests will be presented in a next paper by comparison with high-velocity laboratory experiments on porous materials [Jutzi et al., in preparation]. Once validated at small scales, our new impact code can then be used at larger scales to study impacts and collisions involving brittle solids including porosity, such as the parent bodies of C-type asteroid families or cometary materials, both in the strength- and in the gravity-dominated regime.

  14. A discrete momentum-conserving explicit algorithm for rigid body dynamics analysis

    NASA Technical Reports Server (NTRS)

    Park, K. C.; Chiou, J. C.

    1993-01-01

    A discrete momentum-conserving explicit time integration is presented. The accurate feature and simplicity of the present algorithm are realized by a mid-point implicit formula for integrating the Euler parameters and a second-order discrete momentum-conserving form of the central difference algorithm, respectively. The accuracy and robustness of the algorithm is demonstrated by example problems which exhibit large overall rigid motions under holonomic constraints.

  15. Study of the counting efficiency of a WBC setup by using a computational 3D human body library in sitting position based on polygonal mesh surfaces.

    PubMed

    Fonseca, T C Ferreira; Bogaerts, R; Lebacq, A L; Mihailescu, C L; Vanhavere, F

    2014-04-01

    A realistic computational 3D human body library, called MaMP and FeMP (Male and Female Mesh Phantoms), based on polygonal mesh surface geometry, has been created to be used for numerical calibration of the whole body counter (WBC) system of the nuclear power plant (NPP) in Doel, Belgium. The main objective was to create flexible computational models varying in gender, body height, and mass for studying the morphology-induced variation of the detector counting efficiency (CE) and reducing the measurement uncertainties. First, the counting room and an HPGe detector were modeled using MCNPX (Monte Carlo radiation transport code). The validation of the model was carried out for different sample-detector geometries with point sources and a physical phantom. Second, CE values were calculated for a total of 36 different mesh phantoms in a seated position using the validated Monte Carlo model. This paper reports on the validation process of the in vivo whole body system and the CE calculated for different body heights and weights. The results reveal that the CE is strongly dependent on the individual body shape, size, and gender and may vary by a factor of 1.5 to 3 depending on the morphology aspects of the individual to be measured.

  16. Self-propulsion of a body with rigid surface and variable coefficient of lift in a perfect fluid

    NASA Astrophysics Data System (ADS)

    Ramodanov, Sergey M.; Tenenev, Valentin A.; Treschev, Dmitry V.

    2012-11-01

    We study the system of a 2D rigid body moving in an unbounded volume of incompressible, vortex-free perfect fluid which is at rest at infinity. The body is equipped with a gyrostat and a so-called Flettner rotor. Due to the latter the body is subject to a lifting force (Magnus effect). The rotational velocities of the gyrostat and the rotor are assumed to be known functions of time (control inputs). The equations of motion are presented in the form of the Kirchhoff equations. The integrals of motion are given in the case of piecewise continuous control. Using these integrals we obtain a (reduced) system of first-order differential equations on the configuration space. Then an optimal control problem for several types of the inputs is solved using genetic algorithms.

  17. Assessment of the 3 D Pore Structure and Individual Components of Preshaped Catalyst Bodies by X-Ray Imaging.

    PubMed

    da Silva, Julio C; Mader, Kevin; Holler, Mirko; Haberthür, David; Diaz, Ana; Guizar-Sicairos, Manuel; Cheng, Wu-Cheng; Shu, Yuying; Raabe, Jörg; Menzel, Andreas; van Bokhoven, Jeroen A

    2015-02-01

    Porosity in catalyst particles is essential because it enables reactants to reach the active sites and it enables products to leave the catalyst. The engineering of composite-particle catalysts through the tuning of pore-size distribution and connectivity is hampered by the inability to visualize structure and porosity at critical-length scales. Herein, it is shown that the combination of phase-contrast X-ray microtomography and high-resolution ptychographic X-ray tomography allows the visualization and characterization of the interparticle pores at micro- and nanometer-length scales. Furthermore, individual components in preshaped catalyst bodies used in fluid catalytic cracking, one of the most used catalysts, could be visualized and identified. The distribution of pore sizes, as well as enclosed pores, which cannot be probed by traditional methods, such as nitrogen physisorption and isotherm analysis, were determined.

  18. N-Body Classical Systems and Neural Networks on a 3d SIMD Massive Parallel Processor:. APE100/QUADRICS

    NASA Astrophysics Data System (ADS)

    Paolucci, P. S.

    A number of physical systems (e.g., N body Newtonian, Coulombian or Lennard-Jones systems) can be described by N2 interaction terms. Completely connected neural networks are characterised by the same kind of connections: Each neuron sends signals to all the other neurons via synapses. The APE100/Quadricsmassive parallel architecture, with processing power in excess of 100 Gigaflops and a central memory of 8 Gigabytes seems to have processing power and memory adequate to simulate systems formed by more than 1 billion synapses or interaction terms. On the other hand the processing nodes of APE100/Quadrics are organised in a tridimensional cubic lattice; each processing node has a direct communication path only toward the first neighboring nodes. Here we describe a convenient way to map systems with global connectivity onto the first-neighbors connectivity of the APE100/Quadrics architecture. Some numeric criteria, which are useful for matching SIMD tridimensional architectures with globally connected simulations, are introduced.

  19. Computer program for post-flight analysis of rigid body moments acting on a launch vehicle first stage

    NASA Technical Reports Server (NTRS)

    Knauber, R. N.

    1982-01-01

    A FORTRAN coded computer program and method for evaluation of the rigid body disturbing moments for a launch vehicle first stage based on post-flight measurements is described. The technique is a straightforward deterministic approach. Residual moments are computed to satisfy the equations of motion. Residuals are expressed in terms of altered vehicle characteristics; the aerodynamic coefficients, thrust misalignment, and control effectiveness. This method was used on the Scout launch vehicle and uncovered several significant differences between flight data and wind tunnel data. The computer program is written in FORTRAN IV for a CDC CYBER 173 computer system.

  20. Quantification of the postural and technical errors in asymptomatic adults using direct 3D whole body scan measurements of standing posture.

    PubMed

    Tomkinson, Grant R; Shaw, Linda G

    2013-02-01

    Measurement repeatability has important decision-making implications for clinicians and researchers when assessing individuals. The aims of this study were to quantify: (a) the repeatability of direct measurements of standing posture using three dimensional (3D) whole body scanning, and (b) the magnitude of the postural and technical errors involved. Fifty-two asymptomatic adults were scanned twice, 24h apart, using the Vitus Smart 3D whole body scanner. Eleven clinically relevant standing postural measurements were calculated from scan-extracted data. The process was repeated with 10 shop mannequins. Systematic error was expressed as absolute changes in means and as standardised effect sizes, with random (within-subject) error expressed as the typical error. Technical error was calculated as the typical error in the measurement of mannequins; total error as the typical error in the measurement of subjects; and postural error as the square root of the difference between the squared total error and the squared technical error. Most standing postural measurements demonstrated good repeatability, with median (95% CI) systematic and random errors of -0.1° (1.1°) and 2.8° (1.9°), respectively. However, head and neck postures demonstrated poor repeatability due to large random errors brought about by large postural errors. Overall, most of the error was due to postural error rather than technical error. The relatively small technical errors highlight that this 3D measurement process is generally repeatable, while the relatively large postural errors related to the head and neck suggest that these postures probably lack the precision to be clinically useful using this procedure.

  1. Comparison of 3D laser-based photonic scans and manual anthropometric measurements of body size and shape in a validation study of 123 young Swiss men

    PubMed Central

    Zwahlen, Marcel; Wells, Jonathan C.; Bender, Nicole; Henneberg, Maciej

    2017-01-01

    Background Manual anthropometric measurements are time-consuming and challenging to perform within acceptable intra- and inter-individual error margins in large studies. Three-dimensional (3D) laser body scanners provide a fast and precise alternative: within a few seconds the system produces a 3D image of the body topography and calculates some 150 standardised body size measurements. Objective The aim was to enhance the small number of existing validation studies and compare scan and manual techniques based on five selected measurements. We assessed the agreement between two repeated measurements within the two methods, analysed the direct agreement between the two methods, and explored the differences between the techniques when used in regressions assessing the effect of health related determinants on body shape indices. Methods We performed two repeated body scans on 123 volunteering young men using a Vitus Smart XXL body scanner. We manually measured height, waist, hip, buttock, and chest circumferences twice for each participant according to the WHO guidelines. The participants also filled in a basic questionnaire. Results Mean differences between the two scan measurements were smaller than between the two manual measurements, and precision as well as intra-class correlation coefficients were higher. Both techniques were strongly correlated. When comparing means between both techniques we found significant differences: Height was systematically shorter by 2.1 cm, whereas waist, hip and bust circumference measurements were larger in the scans by 1.17–4.37 cm. In consequence, body shape indices also became larger and the prevalence of overweight was greater when calculated from the scans. Between 4.1% and 7.3% of the probands changed risk category from normal to overweight when classified based on the scans. However, when employing regression analyses the two measurement techniques resulted in very similar coefficients, confidence intervals, and p

  2. Seismic body-wave interferometry using noise autocorrelations for crustal structure and a tutorial on 3D seismic processing and imaging using Madagascar

    NASA Astrophysics Data System (ADS)

    Olejnik, Peter

    Seismic body-wave interferometry is applied to selected seismic stations from the USArray Earthscope Transportable Array (TA) by autocorrelating ambient seismic noise recordings to construct effective zero-offset reflection seismograms. The robustness of the auto-correlations of noise traces is first tested on a TA station in Nevada where body-wave reflections similar to those found in an earlier study are identified. This approach is then applied to several TA stations in the central U.S., and the results are compared with synthetic data. Different stacking time periods are then examined to find the shortest time intervals that provide stable correlation stacks. A tutorial on 3D seismic processing and imaging using the Madagascar open-source software package is next presented for educational purposes. The 3D Teapot Dome seismic data set is examined to illustrate the processing and imaging steps. A number of processing steps are applied to the data set, including amplitude gaining, muting, deconvolution, static corrections, velocity analysis, normal moveout (NMO) correction, and stacking. Post-stack time and depth migrations are then performed on the stacked data along with post-migration f-x deconvolution.

  3. Estimating 3D L5/S1 moments and ground reaction forces during trunk bending using a full-body ambulatory inertial motion capture system.

    PubMed

    Faber, G S; Chang, C C; Kingma, I; Dennerlein, J T; van Dieën, J H

    2016-04-11

    Inertial motion capture (IMC) systems have become increasingly popular for ambulatory movement analysis. However, few studies have attempted to use these measurement techniques to estimate kinetic variables, such as joint moments and ground reaction forces (GRFs). Therefore, we investigated the performance of a full-body ambulatory IMC system in estimating 3D L5/S1 moments and GRFs during symmetric, asymmetric and fast trunk bending, performed by nine male participants. Using an ambulatory IMC system (Xsens/MVN), L5/S1 moments were estimated based on the upper-body segment kinematics using a top-down inverse dynamics analysis, and GRFs were estimated based on full-body segment accelerations. As a reference, a laboratory measurement system was utilized: GRFs were measured with Kistler force plates (FPs), and L5/S1 moments were calculated using a bottom-up inverse dynamics model based on FP data and lower-body kinematics measured with an optical motion capture system (OMC). Correspondence between the OMC+FP and IMC systems was quantified by calculating root-mean-square errors (RMSerrors) of moment/force time series and the interclass correlation (ICC) of the absolute peak moments/forces. Averaged over subjects, L5/S1 moment RMSerrors remained below 10Nm (about 5% of the peak extension moment) and 3D GRF RMSerrors remained below 20N (about 2% of the peak vertical force). ICCs were high for the peak L5/S1 extension moment (0.971) and vertical GRF (0.998). Due to lower amplitudes, smaller ICCs were found for the peak asymmetric L5/S1 moments (0.690-0.781) and horizontal GRFs (0.559-0.948). In conclusion, close correspondence was found between the ambulatory IMC-based and laboratory-based estimates of back load.

  4. Protein-protein interaction network prediction by using rigid-body docking tools: application to bacterial chemotaxis.

    PubMed

    Matsuzaki, Yuri; Ohue, Masahito; Uchikoga, Nobuyuki; Akiyama, Yutaka

    2014-01-01

    Core elements of cell regulation are made up of protein-protein interaction (PPI) networks. However, many parts of the cell regulatory systems include unknown PPIs. To approach this problem, we have developed a computational method of high-throughput PPI network prediction based on all-to-all rigid-body docking of protein tertiary structures. The prediction system accepts a set of data comprising protein tertiary structures as input and generates a list of possible interacting pairs from all the combinations as output. A crucial advantage of this docking based method is in providing predictions of protein pairs that increases our understanding of biological pathways by analyzing the structures of candidate complex structures, which gives insight into novel interaction mechanisms. Although such exhaustive docking calculation requires massive computational resources, recent advancements in the computational sciences have made such large-scale calculations feasible. In this study we applied our prediction method to a pathway reconstruction problem of bacterial chemotaxis by using two different rigid-body docking tools with different scoring models. We found that the predicted interactions were different between the results from the two tools. When the positive predictions from both of the docking tools were combined, all the core signaling interactions were correctly predicted with the exception of interactions activated by protein phosphorylation. Large-scale PPI prediction using tertiary structures is an effective approach that has a wide range of potential applications. This method is especially useful for identifying novel PPIs of new pathways that control cellular behavior.

  5. A conservative coupling algorithm between a compressible flow and a rigid body using an Embedded Boundary method

    NASA Astrophysics Data System (ADS)

    Monasse, L.; Daru, V.; Mariotti, C.; Piperno, S.; Tenaud, C.

    2012-04-01

    This paper deals with a new solid-fluid coupling algorithm between a rigid body and an unsteady compressible fluid flow, using an Embedded Boundary method. The coupling with a rigid body is a first step towards the coupling with a Discrete Element method. The flow is computed using a finite volume approach on a Cartesian grid. The expression of numerical fluxes does not affect the general coupling algorithm and we use a one-step high-order scheme proposed by Daru and Tenaud [V. Daru, C. Tenaud, J. Comput. Phys. (2004)]. The Embedded Boundary method is used to integrate the presence of a solid boundary in the fluid. The coupling algorithm is totally explicit and ensures exact mass conservation and a balance of momentum and energy between the fluid and the solid. It is shown that the scheme preserves uniform movement of both fluid and solid and introduces no numerical boundary roughness. The efficiency of the method is demonstrated on challenging one- and two-dimensional benchmarks.

  6. Tumor control probability and the utility of 4D vs 3D dose calculations for stereotactic body radiotherapy for lung cancer

    SciTech Connect

    Valdes, Gilmer; Robinson, Clifford; Lee, Percy; Morel, Delphine; Low, Daniel; Iwamoto, Keisuke S.; Lamb, James M.

    2015-04-01

    Four-dimensional (4D) dose calculations for lung cancer radiotherapy have been technically feasible for a number of years but have not become standard clinical practice. The purpose of this study was to determine if clinically significant differences in tumor control probability (TCP) exist between 3D and 4D dose calculations so as to inform the decision whether 4D dose calculations should be used routinely for treatment planning. Radiotherapy plans for Stage I-II lung cancer were created for 8 patients. Clinically acceptable treatment plans were created with dose calculated on the end-exhale 4D computed tomography (CT) phase using a Monte Carlo algorithm. Dose was then projected onto the remaining 9 phases of 4D-CT using the Monte Carlo algorithm and accumulated onto the end-exhale phase using commercially available deformable registration software. The resulting dose-volume histograms (DVH) of the gross tumor volume (GTV), planning tumor volume (PTV), and PTV{sub setup} were compared according to target coverage and dose. The PTV{sub setup} was defined as a volume including the GTV and a margin for setup uncertainties but not for respiratory motion. TCPs resulting from these DVHs were estimated using a wide range of alphas, betas, and tumor cell densities. Differences of up to 5 Gy were observed between 3D and 4D calculations for a PTV with highly irregular shape. When the TCP was calculated using the resulting DVHs for fractionation schedules typically used in stereotactic body radiation therapy (SBRT), the TCP differed at most by 5% between 4D and 3D cases, and in most cases, it was by less than 1%. We conclude that 4D dose calculations are not necessary for most cases treated with SBRT, but they might be valuable for irregularly shaped target volumes. If 4D calculations are used, 4D DVHs should be evaluated on volumes that include margin for setup uncertainty but not respiratory motion.

  7. Rigid-body rotation of an electron cloud in divergent magnetic fields

    NASA Astrophysics Data System (ADS)

    Fruchtman, A.; Gueroult, R.; Fisch, N. J.

    2013-07-01

    For a given voltage across a divergent poloidal magnetic field, two electric potential distributions, each supported by a rigid-rotor electron cloud rotating with a different frequency, are found analytically. The two rotation frequencies correspond to the slow and fast rotation frequencies known in uniform plasma. Due to the centrifugal force, the equipotential surfaces, that correspond to the two electric potential distributions, diverge more than the magnetic surfaces do, the equipotential surfaces in the fast mode diverge largely in particular. The departure of the equipotential surfaces from the magnetic field surfaces may have a significant focusing effect on the ions accelerated by the electric field. The focusing effect could be important for laboratory plasma accelerators as well as for collimation of astrophysical jets.

  8. An integral equation formulation for rigid bodies in Stokes flow in three dimensions

    NASA Astrophysics Data System (ADS)

    Corona, Eduardo; Greengard, Leslie; Rachh, Manas; Veerapaneni, Shravan

    2017-03-01

    We present a new derivation of a boundary integral equation (BIE) for simulating the three-dimensional dynamics of arbitrarily-shaped rigid particles of genus zero immersed in a Stokes fluid, on which are prescribed forces and torques. Our method is based on a single-layer representation and leads to a simple second-kind integral equation. It avoids the use of auxiliary sources within each particle that play a role in some classical formulations. We use a spectrally accurate quadrature scheme to evaluate the corresponding layer potentials, so that only a small number of spatial discretization points per particle are required. The resulting discrete sums are computed in O (n) time, where n denotes the number of particles, using the fast multipole method (FMM). The particle positions and orientations are updated by a high-order time-stepping scheme. We illustrate the accuracy, conditioning and scaling of our solvers with several numerical examples.

  9. Rigid-body rotation of an electron cloud in divergent magnetic fields

    DOE PAGES

    Fruchtman, A.; Gueroult, R.; Fisch, N. J.

    2013-07-10

    For a given voltage across a divergent poloidal magnetic field, two electric potential distributions, each supported by a rigid-rotor electron cloud rotating with a different frequency, are found analytically. The two rotation frequencies correspond to the slow and fast rotation frequencies known in uniform plasma. Due to the centrifugal force, the equipotential surfaces, that correspond to the two electric potential distributions, diverge more than the magnetic surfaces do, the equipotential surfaces in the fast mode diverge largely in particular. The departure of the equipotential surfaces from the magnetic field surfaces may have a significant focusing effect on the ions acceleratedmore » by the electric field. Furthermore, the focusing effect could be important for laboratory plasma accelerators as well as for collimation of astrophysical jets.« less

  10. Rigid-body rotation of an electron cloud in divergent magnetic fields

    SciTech Connect

    Fruchtman, A.; Gueroult, R.; Fisch, N. J.

    2013-07-10

    For a given voltage across a divergent poloidal magnetic field, two electric potential distributions, each supported by a rigid-rotor electron cloud rotating with a different frequency, are found analytically. The two rotation frequencies correspond to the slow and fast rotation frequencies known in uniform plasma. Due to the centrifugal force, the equipotential surfaces, that correspond to the two electric potential distributions, diverge more than the magnetic surfaces do, the equipotential surfaces in the fast mode diverge largely in particular. The departure of the equipotential surfaces from the magnetic field surfaces may have a significant focusing effect on the ions accelerated by the electric field. Furthermore, the focusing effect could be important for laboratory plasma accelerators as well as for collimation of astrophysical jets.

  11. Rigid-body rotation of an electron cloud in divergent magnetic fields

    SciTech Connect

    Fruchtman, A.; Gueroult, R.; Fisch, N. J.

    2013-07-15

    For a given voltage across a divergent poloidal magnetic field, two electric potential distributions, each supported by a rigid-rotor electron cloud rotating with a different frequency, are found analytically. The two rotation frequencies correspond to the slow and fast rotation frequencies known in uniform plasma. Due to the centrifugal force, the equipotential surfaces, that correspond to the two electric potential distributions, diverge more than the magnetic surfaces do, the equipotential surfaces in the fast mode diverge largely in particular. The departure of the equipotential surfaces from the magnetic field surfaces may have a significant focusing effect on the ions accelerated by the electric field. The focusing effect could be important for laboratory plasma accelerators as well as for collimation of astrophysical jets.

  12. Recumbent vs. upright bicycles: 3D trajectory of body centre of mass, limb mechanical work, and operative range of propulsive muscles.

    PubMed

    Telli, Riccardo; Seminati, Elena; Pavei, Gaspare; Minetti, Alberto Enrico

    2017-03-01

    Recumbent bicycles (RB) are high performance, human-powered vehicles. In comparison to normal/upright bicycles (NB) the RB may allow individuals to reach higher speeds due to aerodynamic advantages. The purpose of this investigation was to compare the non-aerodynamic factors that may potentially influence the performance of the two bicycles. 3D body centre of mass (BCoM) trajectory, its symmetries, and the components of the total mechanical work necessary to sustain cycling were assessed through 3D kinematics and computer simulations. Data collected at 50, 70, 90 110 rpm during stationary cycling were used to drive musculoskeletal modelling simulation and estimate muscle-tendon length. Results demonstrated that BCoM trajectory, confined in a 15-mm side cube, changed its orientation, maintaining a similar pattern across all cadences in both bicycles. RB displayed a reduced additional mechanical external power (16.1 ± 9.7 W on RB vs. 20.3 ± 8.8 W on NB), a greater symmetry on the progression axis, and no differences in the internal mechanical power compared to NB. Simulated muscle activity revealed small significant differences for only selected muscles. On the RB, quadriceps and gluteus demonstrated greater shortening, while biceps femoris, iliacus, and psoas exhibited greater stretch; however, aerodynamics still remains the principal benefit.

  13. Drag Prediction for the DLR-F4 Wing/Body using OVERFLOW and CFL3D on an Overset Mesh

    NASA Technical Reports Server (NTRS)

    Vassberg, John C.; Buning, Pieter G.; Rumsey, Christopher L.

    2002-01-01

    This paper reviews the importance of numerical drag prediction in an aircraft design environment. A chronicle of collaborations between the authors and colleagues is discussed. This retrospective provides a road-map which illustrates some of the actions taken in the past seven years in pursuit of accurate drag prediction. The advances made possible through these collaborations have changed the manner in which business is conducted during the design of all-new aircraft. The subject of this study is the DLR-F4 wing/body transonic model. Specifically, the work conducted herein was in support of the 1st CFD Drag Prediction Workshop, which was held in conjunction with the 19th Applied Aerodynamics Conference in Anaheim, CA during June, 2001. Comprehensive sets of OVERFLOW simulations were independently performed by several users on a variety of computational platforms. CFL3D was used on a limited basis for additional comparison on the same overset mesh. Drag polars based on this database were constructed with a CFD-to-Test correction applied and compared with test data from three facilities. These comparisons show that the predicted drag polars fall inside the scatter band of the test data, at least for pre-buffet conditions. This places the corrected drag levels within 1% of the averaged experimental values. At the design point, the OVERFLOW and CFL3D drag predictions are within 1-2% of each other. In addition, drag-rise characteristics and a boundary of drag-divergence Mach number are presented.

  14. Using a time-domain higher-order boundary element method to simulate wave and current diffraction from a 3-D body

    NASA Astrophysics Data System (ADS)

    Liu, Zhen; Teng, Bin; Ning, De-Zhi; Sun, Liang

    2010-06-01

    To study wave-current actions on 3-D bodies a time-domain numerical model was established using a higher-order boundary element method (HOBEM). By assuming small flow velocities, the velocity potential could be expressed for linear and higher order components by perturbation expansion. A 4th-order Runge-Kutta method was applied for time marching. An artificial damping layer was adopted at the outer zone of the free surface mesh to dissipate scattering waves. Validation of the numerical method was carried out on run-up, wave exciting forces, and mean drift forces for wave-currents acting on a bottom-mounted vertical cylinder. The results were in close agreement with the results of a frequency-domain method and a published time-domain method. The model was then applied to compute wave-current forces and run-up on a Seastar mini tension-leg platform.

  15. Effects of body configuration on pelvic injury in backward fall simulation using 3D finite element models of pelvis-femur-soft tissue complex.

    PubMed

    Majumder, Santanu; Roychowdhury, Amit; Pal, Subrata

    2009-07-22

    Injuries due to backward fall apart from sideways fall are a major health problem, particularly among the aged populations. The objectives of this study was to evaluate the responses to changing body configurations (angle between the trunk and impacting floor as 0 degrees, 15 degrees, 45 degrees and 80 degrees) during backward fall, based on a previously developed CT-scan-derived 3D non-linear and non-homogeneous finite element (FE) model of pelvis-femur-soft tissue complex with simplified biomechanical representation of the whole body. Under constant impact energy, these FE models evaluated the pelvic injury situations on the basis of peak impact force (7.64-16.74 kN) and peak principal compressive strain (more than 1.5%), consistent with the clinically observed injuries (sacral insufficiency, coccydynia). Also the change in location of peak strain and increase in peak impact force for changing configurations from 0 degrees to 80 degrees indicated the effect of whole body inertia during backward fall. It was also concluded that the inclusion of sacro-iliac and acetabular cartilages in the above FE models will further reduce above findings marginally (9.2% for 15 degrees fall). These quantifications would also be helpful for a better design and development of safety structures such as safety floor for the nursing home or home for the aged persons.

  16. A computerized framework for monitoring four-dimensional dose distributions during stereotactic body radiation therapy using a portal dose image-based 2D/3D registration approach.

    PubMed

    Nakamoto, Takahiro; Arimura, Hidetaka; Nakamura, Katsumasa; Shioyama, Yoshiyuki; Mizoguchi, Asumi; Hirose, Taka-Aki; Honda, Hiroshi; Umezu, Yoshiyuki; Nakamura, Yasuhiko; Hirata, Hideki

    2015-03-01

    A computerized framework for monitoring four-dimensional (4D) dose distributions during stereotactic body radiation therapy based on a portal dose image (PDI)-based 2D/3D registration approach has been proposed in this study. Using the PDI-based registration approach, simulated 4D "treatment" CT images were derived from the deformation of 3D planning CT images so that a 2D planning PDI could be similar to a 2D dynamic clinical PDI at a breathing phase. The planning PDI was calculated by applying a dose calculation algorithm (a pencil beam convolution algorithm) to the geometry of the planning CT image and a virtual water equivalent phantom. The dynamic clinical PDIs were estimated from electronic portal imaging device (EPID) dynamic images including breathing phase data obtained during a treatment. The parameters of the affine transformation matrix were optimized based on an objective function and a gamma pass rate using a Levenberg-Marquardt (LM) algorithm. The proposed framework was applied to the EPID dynamic images of ten lung cancer patients, which included 183 frames (mean: 18.3 per patient). The 4D dose distributions during the treatment time were successfully obtained by applying the dose calculation algorithm to the simulated 4D "treatment" CT images. The mean±standard deviation (SD) of the percentage errors between the prescribed dose and the estimated dose at an isocenter for all cases was 3.25±4.43%. The maximum error for the ten cases was 14.67% (prescribed dose: 1.50Gy, estimated dose: 1.72Gy), and the minimum error was 0.00%. The proposed framework could be feasible for monitoring the 4D dose distribution and dose errors within a patient's body during treatment.

  17. Correcting a Widespread Error concerning the Angular Velocity of a Rotating Rigid Body.

    ERIC Educational Resources Information Center

    Leubner, C.

    1981-01-01

    Since many texts use an incorrect argument in obtaining the instantaneous velocity of a rotating body, a correct and concise derivation of this quantity for a rather general case is given. (Author/SK)

  18. Repositioning accuracy of two different mask systems-3D revisited: Comparison using true 3D/3D matching with cone-beam CT

    SciTech Connect

    Boda-Heggemann, Judit . E-mail: judit.boda-heggemann@radonk.ma.uni-heidelberg.de; Walter, Cornelia; Rahn, Angelika; Wertz, Hansjoerg; Loeb, Iris; Lohr, Frank; Wenz, Frederik

    2006-12-01

    Purpose: The repositioning accuracy of mask-based fixation systems has been assessed with two-dimensional/two-dimensional or two-dimensional/three-dimensional (3D) matching. We analyzed the accuracy of commercially available head mask systems, using true 3D/3D matching, with X-ray volume imaging and cone-beam CT. Methods and Materials: Twenty-one patients receiving radiotherapy (intracranial/head-and-neck tumors) were evaluated (14 patients with rigid and 7 with thermoplastic masks). X-ray volume imaging was analyzed online and offline separately for the skull and neck regions. Translation/rotation errors of the target isocenter were analyzed. Four patients were treated to neck sites. For these patients, repositioning was aided by additional body tattoos. A separate analysis of the setup error on the basis of the registration of the cervical vertebra was performed. The residual error after correction and intrafractional motility were calculated. Results: The mean length of the displacement vector for rigid masks was 0.312 {+-} 0.152 cm (intracranial) and 0.586 {+-} 0.294 cm (neck). For the thermoplastic masks, the value was 0.472 {+-} 0.174 cm (intracranial) and 0.726 {+-} 0.445 cm (neck). Rigid masks with body tattoos had a displacement vector length in the neck region of 0.35 {+-} 0.197 cm. The intracranial residual error and intrafractional motility after X-ray volume imaging correction for rigid masks was 0.188 {+-} 0.074 cm, and was 0.134 {+-} 0.14 cm for thermoplastic masks. Conclusions: The results of our study have demonstrated that rigid masks have a high intracranial repositioning accuracy per se. Given the small residual error and intrafractional movement, thermoplastic masks may also be used for high-precision treatments when combined with cone-beam CT. The neck region repositioning accuracy was worse than the intracranial accuracy in both cases. However, body tattoos and image guidance improved the accuracy. Finally, the combination of both mask

  19. Governing equations of multi-component rigid body-spring discrete element models of reinforced concrete columns

    NASA Astrophysics Data System (ADS)

    Guan, P. B.; Tingatinga, E. A.; Longalong, R. E.; Saguid, J.

    2016-09-01

    During the past decades, the complexity of conventional methods to perform seismic performance assessment of buildings led to the development of more effective approaches. The rigid body spring-discrete element method (RBS-DEM) is one of these approaches and has recently been applied to the study of the behavior of reinforced concrete (RC) buildings subjected to strong earthquakes. In this paper, the governing equations of RBS-DEM planar elements subjected to lateral loads and horizontal ground motion are presented and used to replicate the hysteretic behavior of experimental RC columns. The RBS-DEM models of columns are made up of rigid components connected by systems of springs that simulate axial, shear, and bending behavior of an RC section. The parameters of springs were obtained using Response-2000 software and the hysteretic response of the models of select columns from the Pacific Earthquake Engineering Research (PEER) Structural Performance Database were computed numerically. Numerical examples show that one-component models were able to simulate the initial stiffness reasonably, while the displacement capacity of actual columns undergoing large displacements were underestimated.

  20. A boundary integral approach to analyze the viscous scattering of a pressure wave by a rigid body

    PubMed Central

    Homentcovschi, Dorel; Miles, Ronald N.

    2008-01-01

    The paper provides boundary integral equations for solving the problem of viscous scattering of a pressure wave by a rigid body. By using this mathematical tool uniqueness and existence theorems are proved. Since the boundary conditions are written in terms of velocities, vector boundary integral equations are obtained for solving the problem. The paper introduces single-layer viscous potentials and also a stress tensor. Correspondingly, a viscous double-layer potential is defined. The properties of all these potentials are investigated. By representing the scattered field as a combination of a single-layer viscous potential and a double-layer viscous potential the problem is reduced to the solution of a singular vectorial integral equation of Fredholm type of the second kind. In the case where the stress vector on the boundary is the main quantity of interest the corresponding boundary singular integral equation is proved to have a unique solution. PMID:18709178

  1. Influence of viscosity on the scattering of an air pressure wave by a rigid body: a regular boundary integral formulation

    PubMed Central

    Homentcovschi, Dorel

    2008-01-01

    This paper gives a regular vector boundary integral equation for solving the problem of viscous scattering of a pressure wave by a rigid body. Firstly, single-layer viscous potentials and a generalized stress tensor are introduced. Correspondingly, generalized viscous double-layer potentials are defined. By representing the scattered field as a combination of a single-layer viscous potential and a generalized viscous double-layer potential, the problem is reduced to the solution of a vectorial Fredholm integral equation of the second kind. Generally, the vector integral equation is singular. However, there is a particular stress tensor, called pseudostress, which yields a regular integral equation. In this case, the Fredholm alternative applies and permits a direct proof of the existence and uniqueness of the solution. The results presented here provide the foundation for a numerical solution procedure. PMID:19865494

  2. mtsslSuite: In silico spin labelling, trilateration and distance-constrained rigid body docking in PyMOL

    NASA Astrophysics Data System (ADS)

    Hagelueken, Gregor; Abdullin, Dinar; Ward, Richard; Schiemann, Olav

    2013-10-01

    Nanometer distance measurements based on electron paramagnetic resonance methods in combination with site-directed spin labelling are powerful tools for the structural analysis of macromolecules. The software package mtsslSuite provides scientists with a set of tools for the translation of experimental distance distributions into structural information. The package is based on the previously published mtsslWizard software for in silico spin labelling. The mtsslSuite includes a new version of MtsslWizard that has improved performance and now includes additional types of spin labels. Moreover, it contains applications for the trilateration of paramagnetic centres in biomolecules and for rigid-body docking of subdomains of macromolecular complexes. The mtsslSuite is tested on a number of challenging test cases and its strengths and weaknesses are evaluated.

  3. Drag Prediction for the DLR-F6 Wing/Body and DPW Wing using CFL3D and OVERFLOW Overset Mesh

    NASA Technical Reports Server (NTRS)

    Sclanfani, Anthony J.; Vassberg, John C.; Harrison, Neal A.; DeHaan, Mark A.; Rumsey, Christopher L.; Rivers, S. Melissa; Morrison, Joseph H.

    2007-01-01

    A series of overset grids was generated in response to the 3rd AIAA CFD Drag Prediction Workshop (DPW-III) which preceded the 25th Applied Aerodynamics Conference in June 2006. DPW-III focused on accurate drag prediction for wing/body and wing-alone configurations. The grid series built for each configuration consists of a coarse, medium, fine, and extra-fine mesh. The medium mesh is first constructed using the current state of best practices for overset grid generation. The medium mesh is then coarsened and enhanced by applying a factor of 1.5 to each (I,J,K) dimension. The resulting set of parametrically equivalent grids increase in size by a factor of roughly 3.5 from one level to the next denser level. CFD simulations were performed on the overset grids using two different RANS flow solvers: CFL3D and OVERFLOW. The results were post-processed using Richardson extrapolation to approximate grid converged values of lift, drag, pitching moment, and angle-of-attack at the design condition. This technique appears to work well if the solution does not contain large regions of separated flow (similar to that seen n the DLR-F6 results) and appropriate grid densities are selected. The extra-fine grid data helped to establish asymptotic grid convergence for both the OVERFLOW FX2B wing/body results and the OVERFLOW DPW-W1/W2 wing-alone results. More CFL3D data is needed to establish grid convergence trends. The medium grid was utilized beyond the grid convergence study by running each configuration at several angles-of-attack so drag polars and lift/pitching moment curves could be evaluated. The alpha sweep results are used to compare data across configurations as well as across flow solvers. With the exception of the wing/body drag polar, the two codes compare well qualitatively showing consistent incremental trends and similar wing pressure comparisons.

  4. Simulation of hip fracture in sideways fall using a 3D finite element model of pelvis-femur-soft tissue complex with simplified representation of whole body.

    PubMed

    Majumder, Santanu; Roychowdhury, Amit; Pal, Subrata

    2007-12-01

    Hip fractures due to sideways falls are a worldwide health problem, especially among the elderly population. The objective of this study was to simulate a real life sideways fall leading to hip fracture. To achieve this a computed tomography (CT) scan based three-dimensional (3D) finite element (FE) model of the pelvis-femur complex was developed using a wide range of mechanical properties in the bone of the complex. For impact absorption through large deformation, surrounding soft tissue was also included in the FE model from CT scan data. To incorporate the inertia effect, the whole body was represented by a spring-mass-dashpot system. For trochanteric soft tissue thickness of 14 mm, body weight of 77.47 kg and average hip impact velocity of 3.17 m/s, this detailed FE model could approximately simulate a sideways fall configuration and examine femoral fracture situation. At the contact surface, the peak impact load was 8331 N. In spite of the presence of 14 mm thick trochanteric soft tissue, within the trochanteric zone the most compressive peak principal strain was 3.5% which exceeds ultimate compressive strain. The modeled trochanteric fracture was consistent with clinical findings and with the findings of previous studies. Further, this detailed FE model may be used to find the effect of trochanteric soft tissue thickness variations on peak impact force, peak strain in sideways fall, and to simulate automobile side impact and backward fall situations.

  5. Role of Ceacam1 in VEGF induced vasculogenesis of murine embryonic stem cell-derived embryoid bodies in 3D culture

    SciTech Connect

    Gu, Angel; Tsark, Walter; Holmes, Kathryn V.; Shively, John E.

    2009-06-10

    CEACAM1 (carcinoembryonic antigen-related cell adhesion molecule 1), a type I transmembrane glycoprotein involved in cell-cell adhesion has been shown to act as an angiogenic factor for mouse and human endothelial cells. Based on the ability of CEACAM1 to initiate lumen formation in human mammary epithelial cells grown in 3D culture (Matrigel), we hypothesized that murine CEACAM1 may play a similar role in vasculogenesis. In order to test this hypothesis, murine embryonic stem (ES) cells stimulated with VEGF were differentiated into embryoid bodies (EB) for 8 days (- 8-0 d) and transferred to Matrigel in the presence or absence of anti-CEACAM1 antibody for an additional 12 days (0-12 d). In the absence of anti-CEACAM1 antibody or in the presence of an isotype control antibody, the EB in Matrigel underwent extensive sprouting, generating lengthy vascular structures with well-defined lumina as demonstrated by confocal microscopy, electron microscopy, and immunohistochemical analysis. Both the length and architecture of the vascular tubes were inhibited by anti-CEACAM1 mAb CC1, a mAb that blocks the cell-cell adhesion functions of CEACAM1, thus demonstrating a critical role for this cell-cell adhesion molecule in generating and maintaining vasculogenesis. QRT-PCR analysis of the VEGF treated ES cells grown under conditions that convert them to EB revealed expression of Ceacam1 as early as - 5 to - 3 d reaching a maximum at day 0 at which time EBs were transferred to Matrigel, thereafter levels at first declined and then increased over time. Other markers of vasculogenesis including Pecam1, VE-Cad, and Tie-1 were not detected until day 0 when EBs were transferred to Matrigel followed by a steady increase in levels, indicating later roles in vasculogenesis. In contrast, Tie-2 and Flk-1 (VEGFR2) were detected on day five of EB formation reaching a maximum at day 0 on transfer to Matrigel, similar to Ceacam1, but after which Tie-2 declined over time, while Flk-1 increased

  6. Left ventricular rigid body rotation in a diffuse large B-cell lymphoma patient with cardiac involvement: A case from the three-dimensional speckle-tracking echocardiographic MAGYAR-Path Study.

    PubMed

    Földeák, Dóra; Kalapos, Anita; Domsik, Péter; Sinkó, Mária; Szeleczki, Nóra; Bagdi, Enikő; Krenács, László; Forster, Tamás; Borbényi, Zita; Nemes, Attila

    2017-02-01

    Secondary myocardial involvement by diffuse large B-cell lymphoma is a rare occurrence. Left ventricular (LV) twist is considered an essential part of LV function. In normal circumstances LV twist results from the movement of two orthogonally oriented muscular bands of a helical myocardial structure with consequent clockwise rotation of the base and counterclockwise rotation of the apex. Three-dimensional (3D) speckle-tracking echocardiography (3DSTE) has been found to be feasible for non-invasive 3D quantification of LV wall motion and rotational mechanics. The present report aimed to assess LV twisting motion in a patient with diffuse large B-cell lymphoma with positron emission tomography/computer tomography-proven cardiac involvement by 3DSTE. During 3DSTE, reduction in some segmental radial, longitudinal, circumferential, area and 3D LV strains were found. Apical and basal LV rotations were found to be in the same counterclockwise direction, confirming near absence of LV twist - so-called rigid body rotation.

  7. Reversal of left ventricular “rigid body rotation” during dipyridamole-induced stress in a patient with stable angina: a case from the three-dimensional speckle tracking echocardiographic MAGYAR-Stress Study

    PubMed Central

    Szántó, Gyula; Kalapos, Anita; Domsik, Péter; Forster, Tamás

    2016-01-01

    The left ventricular (LV) twist is defined as the wringing motion of the heart around its long-axis in systole caused by oppositely directed counterclockwise apical and clockwise basal rotations resulted from the movement of two orthogonally oriented muscular bands. In some clinical circumstances, rotation at both basal and apical levels of the LV occurred in the same clockwise or counterclockwise direction during systole resulting the near absence of LV twist as called left ventricular “rigid body rotation” (LV-RBR). Hereby we present that LV-RBR normalization of LV rotational mechanics could be demonstrated at maximum hyperaemia during dipyridamole-induced stress by three-dimensional (3D) speckle tracking echocardiography in a patient with stable angina. PMID:27429914

  8. Digital holography for mechanical vibration measurements in rigid body displacement: elimination of the latter by means of a variable focal length adjustment

    NASA Astrophysics Data System (ADS)

    Pérez-López, Carlos; Mendoza Santoyo, Fernando; Gutiérrez Hernández, David Asael; Muñoz Solis, Silvino

    2008-06-01

    We present our investigation on the separation of mechanical vibrations from rigid body displacements. Pairs of digital holograms acquired between two consecutive time intervals from this type of events produce phase maps that contain both the vibration and rigid body motion information, or even further fully decorrelated phase maps after computer processing. In order to compensate for body displacements, a conjugate object-image experimental arrangement for digital holography is used to measure the mechanical vibrations in a rectangular flat plate. This is achieved by including an extra lens with variable focal length adjustments in front of the typical lens-aperture combination used in the optical head of a digital holographic set up. Out of plane data is obtained from a framed metal plate subjected to a known modal vibration that is also allowed to move perpendicularly to its surface. We will demonstrate that due to the power adjustment of the added lens the angular phase change in the digital hologram from the known object motion allows the separation of the vibration mode at the image plane. The proposed lens addition into a new optical head arrangement in digital holography combined with an a priori knowledge of the rigid body displacement is able to accurately separate the mechanical vibrations making it a promising method in experiments performed under noisy environments. This research suggests the inclusion of adaptive lenses to control the effective focal length when there is a need to separate two distinctive motion types, i.e., vibration from rigid body motion.

  9. Proton-detected 3D {sup 1}H/{sup 13}C/{sup 1}H correlation experiment for structural analysis in rigid solids under ultrafast-MAS above 60 kHz

    SciTech Connect

    Zhang, Rongchun; Ramamoorthy, Ayyalusamy; Nishiyama, Yusuke

    2015-10-28

    A proton-detected 3D {sup 1}H/{sup 13}C/{sup 1}H chemical shift correlation experiment is proposed for the assignment of chemical shift resonances, identification of {sup 13}C-{sup 1}H connectivities, and proximities of {sup 13}C-{sup 1}H and {sup 1}H-{sup 1}H nuclei under ultrafast magic-angle-spinning (ultrafast-MAS) conditions. Ultrafast-MAS is used to suppress all anisotropic interactions including {sup 1}H-{sup 1}H dipolar couplings, while the finite-pulse radio frequency driven dipolar recoupling (fp-RFDR) pulse sequence is used to recouple dipolar couplings among protons and the insensitive nuclei enhanced by polarization transfer technique is used to transfer magnetization between heteronuclear spins. The 3D experiment eliminates signals from non-carbon-bonded protons and non-proton-bonded carbons to enhance spectral resolution. The 2D (F1/F3) {sup 1}H/{sup 1}H and 2D {sup 13}C/{sup 1}H (F2/F3) chemical shift correlation spectra extracted from the 3D spectrum enable the identification of {sup 1}H-{sup 1}H proximity and {sup 13}C-{sup 1}H connectivity. In addition, the 2D (F1/F2) {sup 1}H/{sup 13}C chemical shift correlation spectrum, incorporated with proton magnetization exchange via the fp-RFDR recoupling of {sup 1}H-{sup 1}H dipolar couplings, enables the measurement of proximities between {sup 13}C and even the remote non-carbon-bonded protons. The 3D experiment also gives three-spin proximities of {sup 1}H-{sup 1}H-{sup 13}C chains. Experimental results obtained from powder samples of L-alanine and L-histidine ⋅ H{sub 2}O ⋅ HCl demonstrate the efficiency of the 3D experiment.

  10. Evaluation of local electric fields generated by transcranial direct current stimulation with an extracephalic reference electrode based on realistic 3D body modeling

    NASA Astrophysics Data System (ADS)

    Im, Chang-Hwan; Park, Ji-Hye; Shim, Miseon; Chang, Won Hyuk; Kim, Yun-Hee

    2012-04-01

    In this study, local electric field distributions generated by transcranial direct current stimulation (tDCS) with an extracephalic reference electrode were evaluated to address extracephalic tDCS safety issues. To this aim, we generated a numerical model of an adult male human upper body and applied the 3D finite element method to electric current conduction analysis. In our simulations, the active electrode was placed over the left primary motor cortex (M1) and the reference electrode was placed at six different locations: over the right temporal lobe, on the right supraorbital region, on the right deltoid, on the left deltoid, under the chin, and on the right buccinator muscle. The maximum current density and electric field intensity values in the brainstem generated by the extracephalic reference electrodes were comparable to, or even less than, those generated by the cephalic reference electrodes. These results suggest that extracephalic reference electrodes do not lead to unwanted modulation of the brainstem cardio-respiratory and autonomic centers, as indicated by recent experimental studies. The volume energy density was concentrated at the neck area by the use of deltoid reference electrodes, but was still smaller than that around the active electrode locations. In addition, the distributions of elicited cortical electric fields demonstrated that the use of extracephalic reference electrodes might allow for the robust prediction of cortical modulations with little dependence on the reference electrode locations.

  11. Evaluation of local electric fields generated by transcranial direct current stimulation with an extracephalic reference electrode based on realistic 3D body modeling.

    PubMed

    Im, Chang-Hwan; Park, Ji-Hye; Shim, Miseon; Chang, Won Hyuk; Kim, Yun-Hee

    2012-04-21

    In this study, local electric field distributions generated by transcranial direct current stimulation (tDCS) with an extracephalic reference electrode were evaluated to address extracephalic tDCS safety issues. To this aim, we generated a numerical model of an adult male human upper body and applied the 3D finite element method to electric current conduction analysis. In our simulations, the active electrode was placed over the left primary motor cortex (M1) and the reference electrode was placed at six different locations: over the right temporal lobe, on the right supraorbital region, on the right deltoid, on the left deltoid, under the chin, and on the right buccinator muscle. The maximum current density and electric field intensity values in the brainstem generated by the extracephalic reference electrodes were comparable to, or even less than, those generated by the cephalic reference electrodes. These results suggest that extracephalic reference electrodes do not lead to unwanted modulation of the brainstem cardio-respiratory and autonomic centers, as indicated by recent experimental studies. The volume energy density was concentrated at the neck area by the use of deltoid reference electrodes, but was still smaller than that around the active electrode locations. In addition, the distributions of elicited cortical electric fields demonstrated that the use of extracephalic reference electrodes might allow for the robust prediction of cortical modulations with little dependence on the reference electrode locations.

  12. Regular and chaotic motions in applied dynamics of a rigid body.

    PubMed

    Beletskii, V. V.; Pivovarov, M. L.; Starostin, E. L.

    1996-06-01

    Periodic and regular motions, having a predictable functioning mode, play an important role in many problems of dynamics. The achievements of mathematics and mechanics (beginning with Poincare) have made it possible to establish that such motion modes, generally speaking, are local and form "islands" of regularity in a "chaotic sea" of essentially unpredictable trajectories. The development of computer techniques together with theoretical investigations makes it possible to study the global structure of the phase space of many problems having applied significance. A review of a number of such problems, considered by the authors in the past four or five years, is given in this paper. These include orientation and rotation problems of artificial and natural celestial bodies and the problem of controlling the motion of a locomotion robot. The structure of phase space is investigated for these problems. The phase trajectories of the motion are constructed by a numerical implementation of the Poincare point map method. Distinctions are made between regular (or resonance), quasiregular (or conditionally periodic), and chaotic trajectories. The evolution of the phase picture as the parameters are varied is investigated. A large number of "phase portraits" gives a notion of the arrangement and size of the stability islands in the "sea" of chaotic motions, about the appearance and disappearance of these islands as the parameters are varied, etc. (c) 1996 American Institute of Physics.

  13. Estimating the Error of an Asymptotic Solution Describing the Angular Oscillations of the Axis of Symmetry of a Rotating Rigid Body

    NASA Astrophysics Data System (ADS)

    Konosevich, B. I.

    2014-07-01

    The error of the Wentzel-Kramers-Brillouin solution of the equations describing the angular motion of the axis of symmetry of rotation of a rigid body (projectile) is estimated. It is established that order of this estimate does not depend on whether the low-frequency oscillations of the axis of symmetry are damped or not

  14. Analogies between the Torque-Free Motion of a Rigid Body about a Fixed Point and Light Propagation in Anisotropic Media

    ERIC Educational Resources Information Center

    Bellver-Cebreros, Consuelo; Rodriguez-Danta, Marcelo

    2009-01-01

    An apparently unnoticed analogy between the torque-free motion of a rotating rigid body about a fixed point and the propagation of light in anisotropic media is stated. First, a new plane construction for visualizing this torque-free motion is proposed. This method uses an intrinsic representation alternative to angular momentum and independent of…

  15. An improved understanding of the natural resonances of moonpools contained within floating rigid-bodies: Theory and application to oscillating water column devices

    SciTech Connect

    Bull, Diana L.

    2015-09-23

    The fundamental interactions between waves, a floating rigid-body, and a moonpool that is selectively open to atmosphere or enclosed to purposefully induce pressure fluctuations are investigated. The moonpool hydrodynamic characteristics and the hydrodynamic coupling to the rigid-body are derived implicitly through reciprocity relations on an array of field points. By modeling the free surface of the moonpool in this manner, an explicit hydrodynamic coupling term is included in the equations of motion. This coupling results in the migration of the moonpool's natural resonance frequency from the piston frequency to a new frequency when enclosed in a floating rigid-body. Two geometries that highlight distinct aspects of marine vessels and oscillating water column (OWC) renewable energy devices are analyzed to reveal the coupled natural resonance migration. The power performance of these two OWCs in regular waves is also investigated. The air chamber is enclosed and a three-dimensional, linear, frequency domain performance model that links the rigid-body to the moonpool through a linear resistive control strategy is detailed. Furthermore, an analytic expression for the optimal linear resistive control values in regular waves is presented.

  16. An improved understanding of the natural resonances of moonpools contained within floating rigid-bodies: Theory and application to oscillating water column devices

    DOE PAGES

    Bull, Diana L.

    2015-09-23

    The fundamental interactions between waves, a floating rigid-body, and a moonpool that is selectively open to atmosphere or enclosed to purposefully induce pressure fluctuations are investigated. The moonpool hydrodynamic characteristics and the hydrodynamic coupling to the rigid-body are derived implicitly through reciprocity relations on an array of field points. By modeling the free surface of the moonpool in this manner, an explicit hydrodynamic coupling term is included in the equations of motion. This coupling results in the migration of the moonpool's natural resonance frequency from the piston frequency to a new frequency when enclosed in a floating rigid-body. Two geometriesmore » that highlight distinct aspects of marine vessels and oscillating water column (OWC) renewable energy devices are analyzed to reveal the coupled natural resonance migration. The power performance of these two OWCs in regular waves is also investigated. The air chamber is enclosed and a three-dimensional, linear, frequency domain performance model that links the rigid-body to the moonpool through a linear resistive control strategy is detailed. Furthermore, an analytic expression for the optimal linear resistive control values in regular waves is presented.« less

  17. A heterogeneous system based on GPU and multi-core CPU for real-time fluid and rigid body simulation

    NASA Astrophysics Data System (ADS)

    da Silva Junior, José Ricardo; Gonzalez Clua, Esteban W.; Montenegro, Anselmo; Lage, Marcos; Dreux, Marcelo de Andrade; Joselli, Mark; Pagliosa, Paulo A.; Kuryla, Christine Lucille

    2012-03-01

    Computational fluid dynamics in simulation has become an important field not only for physics and engineering areas but also for simulation, computer graphics, virtual reality and even video game development. Many efficient models have been developed over the years, but when many contact interactions must be processed, most models present difficulties or cannot achieve real-time results when executed. The advent of parallel computing has enabled the development of many strategies for accelerating the simulations. Our work proposes a new system which uses some successful algorithms already proposed, as well as a data structure organisation based on a heterogeneous architecture using CPUs and GPUs, in order to process the simulation of the interaction of fluids and rigid bodies. This successfully results in a two-way interaction between them and their surrounding objects. As far as we know, this is the first work that presents a computational collaborative environment which makes use of two different paradigms of hardware architecture for this specific kind of problem. Since our method achieves real-time results, it is suitable for virtual reality, simulation and video game fluid simulation problems.

  18. Experiences in determination of non-rigid body motion in industrial environment using low-cost photogrammetry

    NASA Astrophysics Data System (ADS)

    Rupnik, Ewelina; Jansa, Josef

    2013-04-01

    Central to our investigation is determination of dynamic behaviour of a highly reflective platform floating on water, as well as derivation of parameters defining instantaneous water state. The employed imaging setup consists of three off-the-shelf dSLR cameras capable of video recording at a 30Hz frame rate. In order to observe a change, the non-rigid and non-diffuse bodies impose the adoption of artificial targetting and custom measurement algorithms. Attention will be given to an in-house software tool implemented to carry out point measurement, correspondence search, tracking and outlier detection methods in the presence of specular reflections and a multimedia scene. A methodology for retrieval of wave parameters in regular wave conditions is also automatically handled by the software and will be discussed. In the context of performed measurements and achieved results, we will point out the extent to which consumer grade camera can fulfil automation and accuracy demands of industrial applications and the pitfalls entailed. Lastly, we will elaborate on visual representation of computed motion and deformations.

  19. In-plane rigid-body vibration mode characterization with a nanometer resolution by stroboscopic imaging of a microstructured pattern.

    PubMed

    Sandoz, Patrick; Friedt, Jean-Michel; Carry, Emile

    2007-02-01

    This article introduces an improved approach for the characterization of in-plane rigid-body vibration, based on digital processing of stroboscopic images of the moving part. The method involves a sample preparation step, in order to pattern a periodic microstructure on the vibrating device, for instance, by focused ion beam milling. An image processing method has then been developed to perform the optimum reconstruction of this a priori known object feature. In-plane displacement and rotation are deduced simultaneously with a high resolution (10-2 pixel and 0.5 x 10(-3) rad, respectively). The measurement principle combines phase measurements-that provide the high resolution-with correlation-that unwraps the phase with the proper phase constants. The vibration modes of a tuning fork are used for demonstrating the capabilities of the method. For applications allowing the sample preparation, the proposed methodology is more convenient than common interference methods or image processing techniques for the characterization of the vibration modes, even for amplitudes in the nanometer range.

  20. Comparison of Efficency of Translation Between a Deformable Swimmer Versus a Rigid Body in a Bounded Fluid Domain: Consequences for Subcellular Transport

    PubMed Central

    González-García, José S.

    2006-01-01

    In this paper, we compare the translation efficiencies of a deformable circle that swims by means of low amplitude periodic tangential surface waves versus a rigid circle, moving in a bounded fluid domain. The swimmer is found to be much more efficient than the rigid body. We believe that this result gives some support to the active hypothesis of subcellular transport, where it is supposed that the organelle can generate by itself a propulsive flux, (by changes of form or metabolic activities) instead of just being carried by the motion of an external agent, like a molecular motor. PMID:19669454

  1. Europeana and 3D

    NASA Astrophysics Data System (ADS)

    Pletinckx, D.

    2011-09-01

    The current 3D hype creates a lot of interest in 3D. People go to 3D movies, but are we ready to use 3D in our homes, in our offices, in our communication? Are we ready to deliver real 3D to a general public and use interactive 3D in a meaningful way to enjoy, learn, communicate? The CARARE project is realising this for the moment in the domain of monuments and archaeology, so that real 3D of archaeological sites and European monuments will be available to the general public by 2012. There are several aspects to this endeavour. First of all is the technical aspect of flawlessly delivering 3D content over all platforms and operating systems, without installing software. We have currently a working solution in PDF, but HTML5 will probably be the future. Secondly, there is still little knowledge on how to create 3D learning objects, 3D tourist information or 3D scholarly communication. We are still in a prototype phase when it comes to integrate 3D objects in physical or virtual museums. Nevertheless, Europeana has a tremendous potential as a multi-facetted virtual museum. Finally, 3D has a large potential to act as a hub of information, linking to related 2D imagery, texts, video, sound. We describe how to create such rich, explorable 3D objects that can be used intuitively by the generic Europeana user and what metadata is needed to support the semantic linking.

  2. Comparing swimsuits in 3D.

    PubMed

    van Geer, Erik; Molenbroek, Johan; Schreven, Sander; deVoogd-Claessen, Lenneke; Toussaint, Huib

    2012-01-01

    In competitive swimming, suits have become more important. These suits influence friction, pressure and wave drag. Friction drag is related to the surface properties whereas both pressure and wave drag are greatly influenced by body shape. To find a relationship between the body shape and the drag, the anthropometry of several world class female swimmers wearing different suits was accurately defined using a 3D scanner and traditional measuring methods. The 3D scans delivered more detailed information about the body shape. On the same day the swimmers did performance tests in the water with the tested suits. Afterwards the result of the performance tests and the differences found in body shape was analyzed to determine the deformation caused by a swimsuit and its effect on the swimming performance. Although the amount of data is limited because of the few test subjects, there is an indication that the deformation of the body influences the swimming performance.

  3. 3D Printed Bionic Nanodevices.

    PubMed

    Kong, Yong Lin; Gupta, Maneesh K; Johnson, Blake N; McAlpine, Michael C

    2016-06-01

    The ability to three-dimensionally interweave biological and functional materials could enable the creation of bionic devices possessing unique and compelling geometries, properties, and functionalities. Indeed, interfacing high performance active devices with biology could impact a variety of fields, including regenerative bioelectronic medicines, smart prosthetics, medical robotics, and human-machine interfaces. Biology, from the molecular scale of DNA and proteins, to the macroscopic scale of tissues and organs, is three-dimensional, often soft and stretchable, and temperature sensitive. This renders most biological platforms incompatible with the fabrication and materials processing methods that have been developed and optimized for functional electronics, which are typically planar, rigid and brittle. A number of strategies have been developed to overcome these dichotomies. One particularly novel approach is the use of extrusion-based multi-material 3D printing, which is an additive manufacturing technology that offers a freeform fabrication strategy. This approach addresses the dichotomies presented above by (1) using 3D printing and imaging for customized, hierarchical, and interwoven device architectures; (2) employing nanotechnology as an enabling route for introducing high performance materials, with the potential for exhibiting properties not found in the bulk; and (3) 3D printing a range of soft and nanoscale materials to enable the integration of a diverse palette of high quality functional nanomaterials with biology. Further, 3D printing is a multi-scale platform, allowing for the incorporation of functional nanoscale inks, the printing of microscale features, and ultimately the creation of macroscale devices. This blending of 3D printing, novel nanomaterial properties, and 'living' platforms may enable next-generation bionic systems. In this review, we highlight this synergistic integration of the unique properties of nanomaterials with the

  4. From 3D view to 3D print

    NASA Astrophysics Data System (ADS)

    Dima, M.; Farisato, G.; Bergomi, M.; Viotto, V.; Magrin, D.; Greggio, D.; Farinato, J.; Marafatto, L.; Ragazzoni, R.; Piazza, D.

    2014-08-01

    In the last few years 3D printing is getting more and more popular and used in many fields going from manufacturing to industrial design, architecture, medical support and aerospace. 3D printing is an evolution of bi-dimensional printing, which allows to obtain a solid object from a 3D model, realized with a 3D modelling software. The final product is obtained using an additive process, in which successive layers of material are laid down one over the other. A 3D printer allows to realize, in a simple way, very complex shapes, which would be quite difficult to be produced with dedicated conventional facilities. Thanks to the fact that the 3D printing is obtained superposing one layer to the others, it doesn't need any particular work flow and it is sufficient to simply draw the model and send it to print. Many different kinds of 3D printers exist based on the technology and material used for layer deposition. A common material used by the toner is ABS plastics, which is a light and rigid thermoplastic polymer, whose peculiar mechanical properties make it diffusely used in several fields, like pipes production and cars interiors manufacturing. I used this technology to create a 1:1 scale model of the telescope which is the hardware core of the space small mission CHEOPS (CHaracterising ExOPlanets Satellite) by ESA, which aims to characterize EXOplanets via transits observations. The telescope has a Ritchey-Chrétien configuration with a 30cm aperture and the launch is foreseen in 2017. In this paper, I present the different phases for the realization of such a model, focusing onto pros and cons of this kind of technology. For example, because of the finite printable volume (10×10×12 inches in the x, y and z directions respectively), it has been necessary to split the largest parts of the instrument in smaller components to be then reassembled and post-processed. A further issue is the resolution of the printed material, which is expressed in terms of layers

  5. VIRTOPSY--scientific documentation, reconstruction and animation in forensic: individual and real 3D data based geo-metric approach including optical body/object surface and radiological CT/MRI scanning.

    PubMed

    Thali, Michael J; Braun, Marcel; Buck, Ursula; Aghayev, Emin; Jackowski, Christian; Vock, Peter; Sonnenschein, Martin; Dirnhofer, Richard

    2005-03-01

    Until today, most of the documentation of forensic relevant medical findings is limited to traditional 2D photography, 2D conventional radiographs, sketches and verbal description. There are still some limitations of the classic documentation in forensic science especially if a 3D documentation is necessary. The goal of this paper is to demonstrate new 3D real data based geo-metric technology approaches. This paper present approaches to a 3D geo-metric documentation of injuries on the body surface and internal injuries in the living and deceased cases. Using modern imaging methods such as photogrammetry, optical surface and radiological CT/MRI scanning in combination it could be demonstrated that a real, full 3D data based individual documentation of the body surface and internal structures is possible in a non-invasive and non-destructive manner. Using the data merging/fusing and animation possibilities, it is possible to answer reconstructive questions of the dynamic development of patterned injuries (morphologic imprints) and to evaluate the possibility, that they are matchable or linkable to suspected injury-causing instruments. For the first time, to our knowledge, the method of optical and radiological 3D scanning was used to document the forensic relevant injuries of human body in combination with vehicle damages. By this complementary documentation approach, individual forensic real data based analysis and animation were possible linking body injuries to vehicle deformations or damages. These data allow conclusions to be drawn for automobile accident research, optimization of vehicle safety (pedestrian and passenger) and for further development of crash dummies. Real 3D data based documentation opens a new horizon for scientific reconstruction and animation by bringing added value and a real quality improvement in forensic science.

  6. 3d-3d correspondence revisited

    DOE PAGES

    Chung, Hee -Joong; Dimofte, Tudor; Gukov, Sergei; ...

    2016-04-21

    In fivebrane compactifications on 3-manifolds, we point out the importance of all flat connections in the proper definition of the effective 3d N = 2 theory. The Lagrangians of some theories with the desired properties can be constructed with the help of homological knot invariants that categorify colored Jones polynomials. Higgsing the full 3d theories constructed this way recovers theories found previously by Dimofte-Gaiotto-Gukov. As a result, we also consider the cutting and gluing of 3-manifolds along smooth boundaries and the role played by all flat connections in this operation.

  7. 3D deformation field throughout the interior of materials.

    SciTech Connect

    Jin, Huiqing; Lu, Wei-Yang

    2013-09-01

    This report contains the one-year feasibility study for our three-year LDRD proposal that is aimed to develop an experimental technique to measure the 3D deformation fields inside a material body. In this feasibility study, we first apply Digital Volume Correlation (DVC) algorithm to pre-existing in-situ Xray Computed Tomography (XCT) image sets with pure rigid body translation. The calculated displacement field has very large random errors and low precision that are unacceptable. Then we enhance these tomography images by setting threshold of the intensity of each slice. DVC algorithm is able to obtain accurate deformation fields from these enhanced image sets and the deformation fields are consistent with the global mechanical loading that is applied to the specimen. Through this study, we prove that the internal markers inside the pre-existing tomography images of aluminum alloy can be enhanced and are suitable for DVC to calculate the deformation field throughout the material body.

  8. At the limits of a successful body plan – 3D microanatomy, histology and evolution of Helminthope (Mollusca: Heterobranchia: Rhodopemorpha), the most worm-like gastropod

    PubMed Central

    2013-01-01

    Background Gastropods are among the most diverse animal clades, and have successfully colonized special habitats such as the marine sand interstitial. Specialized meiofaunal snails and slugs are tiny and worm-shaped. They combine regressive features – argued to be due to progenetic tendencies – with convergent adaptations. Microscopic size and concerted convergences make morphological examination non-trivial and hamper phylogenetic reconstructions. The enigmatic turbellarian-like Rhodopemorpha are a small group that has puzzled systematists for over a century. A preliminary molecular framework places the group far closer to the root of Heterobranchia – one of the major gastropod groups – than previously suggested. The poorly known meiofaunal Helminthope psammobionta Salvini-Plawen, 1991 from Bermuda is the most worm-shaped free-living gastropod and shows apparently aberrant aspects of anatomy. Its study may give important clues to understand the evolution of rhodopemorphs among basal heterobranchs versus their previously thought origin among ‘higher’ euthyneuran taxa. Results We describe the 3D-microanatomy of H. psammobionta using three-dimensional digital reconstruction based on serial semithin histological sections. The new dataset expands upon the original description and corrects several aspects. Helminthope shows a set of typical adaptations and regressive characters present in other mesopsammic slugs (called ‘meiofaunal syndrome’ herein). The taxonomically important presence of five separate visceral loop ganglia is confirmed, but considerable further detail of the complex nervous system are corrected and revealed. The digestive and reproductive systems are simple and modified to the thread-like morphology of the animal; the anus is far posterior. There is no heart; the kidney resembles a protonephridium. Data on all organ systems are compiled and compared to Rhodope. Conclusions Helminthope is related to Rhodope sharing unique apomorphies

  9. The effect of activity outside the field of view on image quality for a 3D LSO-based whole body PET/CT scanner.

    PubMed

    Matheoud, R; Secco, C; Della Monica, P; Leva, L; Sacchetti, G; Inglese, E; Brambilla, M

    2009-10-07

    The purpose of this study was to quantify the influence of outside field of view (FOV) activity concentration (A(c)(,out)) on the noise equivalent count rate (NECR), scatter fraction (SF) and image quality of a 3D LSO whole-body PET/CT scanner. The contrast-to-noise ratio (CNR) was the figure of merit used to characterize the image quality of PET scans. A modified International Electrotechnical Commission (IEC) phantom was used to obtain SF and counting rates similar to those found in average patients. A scatter phantom was positioned at the end of the modified IEC phantom to simulate an activity that extends beyond the scanner. The modified IEC phantom was filled with (18)F (11 kBq mL(-1)) and the spherical targets, with internal diameter (ID) ranging from 10 to 37 mm, had a target-to-background ratio of 10. PET images were acquired with background activity concentrations into the FOV (A(c)(,bkg)) about 11, 9.2, 6.6, 5.2 and 3.5 kBq mL(-1). The emission scan duration (ESD) was set to 1, 2, 3 and 4 min. The tube inside the scatter phantom was filled with activities to provide A(c)(,out) in the whole scatter phantom of zero, half, unity, twofold and fourfold the one of the modified IEC phantom. Plots of CNR versus the various parameters are provided. Multiple linear regression was employed to study the effects of A(c)(,out) on CNR, adjusted for the presence of variables (sphere ID, A(c)(,bkg) and ESD) related to CNR. The presence of outside FOV activity at the same concentration as the one inside the FOV reduces peak NECR of 30%. The increase in SF is marginal (1.2%). CNR diminishes significantly with increasing outside FOV activity, in the range explored. ESD and A(c)(,out) have a similar weight in accounting for CNR variance. Thus, an experimental law that adjusts the scan duration to the outside FOV activity can be devised. Recovery of CNR loss due to an elevated A(c)(,out) activity seems feasible by modulating the ESD in individual bed positions according to A(c)(,out).

  10. Image sequence coding using 3D scene models

    NASA Astrophysics Data System (ADS)

    Girod, Bernd

    1994-09-01

    The implicit and explicit use of 3D models for image sequence coding is discussed. For implicit use, a 3D model can be incorporated into motion compensating prediction. A scheme that estimates the displacement vector field with a rigid body motion constraint by recovering epipolar lines from an unconstrained displacement estimate and then repeating block matching along the epipolar line is proposed. Experimental results show that an improved displacement vector field can be obtained with a rigid body motion constraint. As an example for explicit use, various results with a facial animation model for videotelephony are discussed. A 13 X 16 B-spline mask can be adapted automatically to individual faces and is used to generate facial expressions based on FACS. A depth-from-defocus range camera suitable for real-time facial motion tracking is described. Finally, the real-time facial animation system `Traugott' is presented that has been used to generate several hours of broadcast video. Experiments suggest that a videophone system based on facial animation might require a transmission bitrate of 1 kbit/s or below.

  11. A topological classification of the Chaplygin systems in the dynamics of a rigid body in a fluid

    SciTech Connect

    Nikolaenko, S S

    2014-02-28

    The paper is concerned with the topological analysis of the Chaplygin integrable case in the dynamics of a rigid body in a fluid. A full list of the topological types of Chaplygin systems in their dependence on the energy level is compiled on the basis of the Fomenko-Zieschang theory. An effective description of the topology of the Liouville foliation in terms of natural coordinate variables is also presented, which opens a direct way to calculating topological invariants. It turns out that on all nonsingular energy levels Chaplygin systems are Liouville equivalent to the well-known Euler case in the dynamics of a rigid body with fixed point. Bibliography: 23 titles.

  12. 3D dynamic computer model of the head-neck complex.

    PubMed

    Sierra, Daniel A; Enderle, John D

    2006-01-01

    A 3D dynamic computer model for the movement of the head is presented that incorporates anatomically correct information about the diverse elements forming the system. The skeleton is considered as a set of interconnected rigid 3D bodies following the Newton-Euler laws of movement. The muscles are modeled using Enderle's linear model. Finally, the soft tissues, namely the ligaments, intervertebral disks, and zigapophysial joints, are modeled using the finite elements approach. The model is intended to study the neural network that controls movement and maintains the balance of the head-neck complex during eye movements.

  13. 3D and Education

    NASA Astrophysics Data System (ADS)

    Meulien Ohlmann, Odile

    2013-02-01

    Today the industry offers a chain of 3D products. Learning to "read" and to "create in 3D" becomes an issue of education of primary importance. 25 years professional experience in France, the United States and Germany, Odile Meulien set up a personal method of initiation to 3D creation that entails the spatial/temporal experience of the holographic visual. She will present some different tools and techniques used for this learning, their advantages and disadvantages, programs and issues of educational policies, constraints and expectations related to the development of new techniques for 3D imaging. Although the creation of display holograms is very much reduced compared to the creation of the 90ies, the holographic concept is spreading in all scientific, social, and artistic activities of our present time. She will also raise many questions: What means 3D? Is it communication? Is it perception? How the seeing and none seeing is interferes? What else has to be taken in consideration to communicate in 3D? How to handle the non visible relations of moving objects with subjects? Does this transform our model of exchange with others? What kind of interaction this has with our everyday life? Then come more practical questions: How to learn creating 3D visualization, to learn 3D grammar, 3D language, 3D thinking? What for? At what level? In which matter? for whom?

  14. A review of a method for dynamic load distribution, dynamical modeling, and explicit internal force control when two manipulators mutually lift and transport a rigid body object

    SciTech Connect

    Unseren, M.A.

    1997-04-20

    The paper reviews a method for modeling and controlling two serial link manipulators which mutually lift and transport a rigid body object in a three dimensional workspace. A new vector variable is introduced which parameterizes the internal contact force controlled degrees of freedom. A technique for dynamically distributing the payload between the manipulators is suggested which yields a family of solutions for the contact forces and torques the manipulators impart to the object. A set of rigid body kinematic constraints which restrict the values of the joint velocities of both manipulators is derived. A rigid body dynamical model for the closed chain system is first developed in the joint space. The model is obtained by generalizing the previous methods for deriving the model. The joint velocity and acceleration variables in the model are expressed in terms of independent pseudovariables. The pseudospace model is transformed to obtain reduced order equations of motion and a separate set of equations governing the internal components of the contact forces and torques. A theoretic control architecture is suggested which explicitly decouples the two sets of equations comprising the model. The controller enables the designer to develop independent, non-interacting control laws for the position control and internal force control of the system.

  15. Design and Task Analysis for a Game-Based Shiphandling Simulator Using an Open Source Game Engine (DELTA3D)

    DTIC Science & Technology

    2011-09-01

    Appendix D, uses Open Dynamics Engine (ODE) and its correspondent Delta3D rigid body wrapper functions to apply forces on the YP at each physical...of the simulation. To simulate the complexity of setting the anchor, dynamic values of mass are calculated for the anchor’s lower body . In real life...models, and artificial intelligence actors are described in this work. For thesis purposes, YPSim was designed using the Brazilian Naval Academy’s YP as

  16. SYMBOD - A computer program for the automatic generation of symbolic equations of motion for systems of hinge-connected rigid bodies

    NASA Technical Reports Server (NTRS)

    Macala, G. A.

    1983-01-01

    A computer program is described that can automatically generate symbolic equations of motion for systems of hinge-connected rigid bodies with tree topologies. The dynamical formulation underlying the program is outlined, and examples are given to show how a symbolic language is used to code the formulation. The program is applied to generate the equations of motion for a four-body model of the Galileo spacecraft. The resulting equations are shown to be a factor of three faster in execution time than conventional numerical subroutines.

  17. CHARACTERISTICS OF THE CRUSTAL MAGMA BODY IN THE 2005-2006 ERUPTION AREA AT 9°50'N ON THE EAST PACIFIC RISE FROM 3D MULTI-CHANNEL SEISMIC DATA

    NASA Astrophysics Data System (ADS)

    Carton, H. D.; Carbotte, S. M.; Mutter, J. C.; Canales, J.; Nedimovic, M. R.; Marjanovic, M.; Aghaei, O.; Xu, M.; Han, S.; Stowe, L.

    2009-12-01

    In the summer of 2008 a large 3D multi-channel seismic dataset (expedition MGL0812) was collected over the 9°50’N Integrated Study Site at the East Pacific Rise, providing insight into the architecture of the magmatic system and its relationship with hydrothermal activity and volcanic/dyking events associated with the 2005-06 eruption. The main area of 3D coverage is located between 9°42’N and 9°57’N, spanning ~28km along-axis, and was acquired along 94 (1 partial) prime lines shot across-axis and each ~24km-long. Pre-processing of the data acquired in this area is now well under way, with significant efforts targeted at amplitude spike removal. Current work focuses on setting up the 3D processing sequence up to the stack stage for a small group of inlines (axis-perpendicular grid lines spaced 37.5m apart) located over the “bull’s eye” site at 9°50’N, a sequence that will subsequently be applied to the whole dataset. At the meeting we will present stacked and migrated sections - inlines, crosslines, time slices - obtained through 3D processing. We will discuss results focusing on the characteristics of the axial magma body, whose detailed structure and along-axis segmentation will be resolved by the 3D data.

  18. 3D Imaging.

    ERIC Educational Resources Information Center

    Hastings, S. K.

    2002-01-01

    Discusses 3 D imaging as it relates to digital representations in virtual library collections. Highlights include X-ray computed tomography (X-ray CT); the National Science Foundation (NSF) Digital Library Initiatives; output peripherals; image retrieval systems, including metadata; and applications of 3 D imaging for libraries and museums. (LRW)

  19. Periodic Motions around the Collinear Equilibrium Points of the R3BP Where the Primary Is a Triaxial Rigid Body and the Secondary Is an Oblate Spheroid

    NASA Astrophysics Data System (ADS)

    Singh, Jagadish; Kalantonis, V. S.; Mrumun Gyegwe, Jessica; Perdiou, A. E.

    2016-12-01

    We consider a modification of the restricted three-body problem where the primary (more massive body) is a triaxial rigid body and the secondary (less massive body) is an oblate spheroid and study periodic motions around the collinear equilibrium points. The locations of these points are first determined for 10 combinations of the parameters of the problem. In all 10 cases, the collinear equilibrium points are found to be unstable, as in the classical problem, and the Lyapunov periodic orbits around them have been computed accurately by applying known corrector-predictor algorithms. An extensive study on the families of three-dimensional periodic orbits emanating from these points has also been done. To find suitable starting points, for all the computed families, semianalytical solutions have been obtained, for both two- and three-dimensional cases, around the collinear equilibrium points using the Lindstedt-Poincaré method. Finally, the stability of all computed periodic orbits has been studied.

  20. Dimensional accuracy of 3D printed vertebra

    NASA Astrophysics Data System (ADS)

    Ogden, Kent; Ordway, Nathaniel; Diallo, Dalanda; Tillapaugh-Fay, Gwen; Aslan, Can

    2014-03-01

    3D printer applications in the biomedical sciences and medical imaging are expanding and will have an increasing impact on the practice of medicine. Orthopedic and reconstructive surgery has been an obvious area for development of 3D printer applications as the segmentation of bony anatomy to generate printable models is relatively straightforward. There are important issues that should be addressed when using 3D printed models for applications that may affect patient care; in particular the dimensional accuracy of the printed parts needs to be high to avoid poor decisions being made prior to surgery or therapeutic procedures. In this work, the dimensional accuracy of 3D printed vertebral bodies derived from CT data for a cadaver spine is compared with direct measurements on the ex-vivo vertebra and with measurements made on the 3D rendered vertebra using commercial 3D image processing software. The vertebra was printed on a consumer grade 3D printer using an additive print process using PLA (polylactic acid) filament. Measurements were made for 15 different anatomic features of the vertebral body, including vertebral body height, endplate width and depth, pedicle height and width, and spinal canal width and depth, among others. It is shown that for the segmentation and printing process used, the results of measurements made on the 3D printed vertebral body are substantially the same as those produced by direct measurement on the vertebra and measurements made on the 3D rendered vertebra.

  1. VirtoScan - a mobile, low-cost photogrammetry setup for fast post-mortem 3D full-body documentations in x-ray computed tomography and autopsy suites.

    PubMed

    Kottner, Sören; Ebert, Lars C; Ampanozi, Garyfalia; Braun, Marcel; Thali, Michael J; Gascho, Dominic

    2017-03-01

    Injuries such as bite marks or boot prints can leave distinct patterns on the body's surface and can be used for 3D reconstructions. Although various systems for 3D surface imaging have been introduced in the forensic field, most techniques are both cost-intensive and time-consuming. In this article, we present the VirtoScan, a mobile, multi-camera rig based on close-range photogrammetry. The system can be integrated into automated PMCT scanning procedures or used manually together with lifting carts, autopsy tables and examination couch. The VirtoScan is based on a moveable frame that carries 7 digital single-lens reflex cameras. A remote control is attached to each camera and allows the simultaneous triggering of the shutter release of all cameras. Data acquisition in combination with the PMCT scanning procedures took 3:34 min for the 3D surface documentation of one side of the body compared to 20:20 min of acquisition time when using our in-house standard. A surface model comparison between the high resolution output from our in-house standard and a high resolution model from the multi-camera rig showed a mean surface deviation of 0.36 mm for the whole body scan and 0.13 mm for a second comparison of a detailed section of the scan. The use of the multi-camera rig reduces the acquisition time for whole-body surface documentations in medico-legal examinations and provides a low-cost 3D surface scanning alternative for forensic investigations.

  2. Mini 3D for shallow gas reconnaissance

    SciTech Connect

    Vallieres, T. des; Enns, D.; Kuehn, H.; Parron, D.; Lafet, Y.; Van Hulle, D.

    1996-12-31

    The Mini 3D project was undertaken by TOTAL and ELF with the support of CEPM (Comite d`Etudes Petrolieres et Marines) to define an economical method of obtaining 3D seismic HR data for shallow gas assessment. An experimental 3D survey was carried out with classical site survey techniques in the North Sea. From these data 19 simulations, were produced to compare different acquisition geometries ranging from dual, 600 m long cables to a single receiver. Results show that short offset, low fold and very simple streamer positioning are sufficient to give a reliable 3D image of gas charged bodies. The 3D data allow a much more accurate risk delineation than 2D HR data. Moreover on financial grounds Mini-3D is comparable in cost to a classical HR 2D survey. In view of these results, such HR 3D should now be the standard for shallow gas surveying.

  3. AE3D

    SciTech Connect

    Spong, Donald A

    2016-06-20

    AE3D solves for the shear Alfven eigenmodes and eigenfrequencies in a torodal magnetic fusion confinement device. The configuration can be either 2D (e.g. tokamak, reversed field pinch) or 3D (e.g. stellarator, helical reversed field pinch, tokamak with ripple). The equations solved are based on a reduced MHD model and sound wave coupling effects are not currently included.

  4. Representation of solutions to the problem of the motion of a heavy rigid body in the Kovalevskaya case in terms of Weierstrass \\zeta- and \\wp-functions and nonintegrability of the Hess case by quadratures

    NASA Astrophysics Data System (ADS)

    Belyaev, A. V.

    2016-07-01

    A method for the representation of Delaunay's solutions and some other particular solutions to the problem of the motion of a heavy rigid body in the Kovalevskaya case in terms of the Weierstrass \\zeta- and \\wp-functions is put forward. The Hess case in the problem of the motion of a heavy rigid body is shown to be nonintegrable by quadratures. Bibliography: 24 titles.

  5. 3D, or Not to Be?

    ERIC Educational Resources Information Center

    Norbury, Keith

    2012-01-01

    It may be too soon for students to be showing up for class with popcorn and gummy bears, but technology similar to that behind the 3D blockbuster movie "Avatar" is slowly finding its way into college classrooms. 3D classroom projectors are taking students on fantastic voyages inside the human body, to the ruins of ancient Greece--even to faraway…

  6. Static & Dynamic Response of 3D Solids

    SciTech Connect

    Lin, Jerry

    1996-07-15

    NIKE3D is a large deformations 3D finite element code used to obtain the resulting displacements and stresses from multi-body static and dynamic structural thermo-mechanics problems with sliding interfaces. Many nonlinear and temperature dependent constitutive models are available.

  7. Construction of a mathematical model of the human body, taking the nonlinear rigidity of the spine into account

    NASA Technical Reports Server (NTRS)

    Glukharev, K. K.; Morozova, N. I.; Potemkin, B. A.; Solovyev, V. S.; Frolov, K. V.

    1973-01-01

    A mathematical model of the human body was constructed, under the action of harmonic vibrations, in the 2.5-7 Hz frequency range. In this frequency range, the model of the human body as a vibrating system, with concentrated parameters is considered. Vertical movements of the seat and vertical components of vibrations of the human body are investigated.

  8. Poisson equations of rotational motion for a rigid triaxial body with application to a tumbling artificial satellite

    NASA Technical Reports Server (NTRS)

    Liu, J. J. F.; Fitzpatrick, P. M.

    1975-01-01

    A mathematical model is developed for studying the effects of gravity gradient torque on the attitude stability of a tumbling triaxial rigid satellite. Poisson equations are used to investigate the rotation of the satellite (which is in elliptical orbit about an attracting point mass) about its center of mass. An averaging method is employed to obtain an intermediate set of differential equations for the nonresonant, secular behavior of the osculating elements which describe the rotational motions of the satellite, and the averaged equations are then integrated to obtain long-term secular solutions for the osculating elements.

  9. 3-D Packaging: A Technology Review

    NASA Technical Reports Server (NTRS)

    Strickland, Mark; Johnson, R. Wayne; Gerke, David

    2005-01-01

    Traditional electronics are assembled as a planar arrangement of components on a printed circuit board (PCB) or other type of substrate. These planar assemblies may then be plugged into a motherboard or card cage creating a volume of electronics. This architecture is common in many military and space electronic systems as well as large computer and telecommunications systems and industrial electronics. The individual PCB assemblies can be replaced if defective or for system upgrade. Some applications are constrained by the volume or the shape of the system and are not compatible with the motherboard or card cage architecture. Examples include missiles, camcorders, and digital cameras. In these systems, planar rigid-flex substrates are folded to create complex 3-D shapes. The flex circuit serves the role of motherboard, providing interconnection between the rigid boards. An example of a planar rigid - flex assembly prior to folding is shown. In both architectures, the interconnection is effectively 2-D.

  10. A 3D interactive method for estimating body segmental parameters in animals: application to the turning and running performance of Tyrannosaurus rex.

    PubMed

    Hutchinson, John R; Ng-Thow-Hing, Victor; Anderson, Frank C

    2007-06-21

    We developed a method based on interactive B-spline solids for estimating and visualizing biomechanically important parameters for animal body segments. Although the method is most useful for assessing the importance of unknowns in extinct animals, such as body contours, muscle bulk, or inertial parameters, it is also useful for non-invasive measurement of segmental dimensions in extant animals. Points measured directly from bodies or skeletons are digitized and visualized on a computer, and then a B-spline solid is fitted to enclose these points, allowing quantification of segment dimensions. The method is computationally fast enough so that software implementations can interactively deform the shape of body segments (by warping the solid) or adjust the shape quantitatively (e.g., expanding the solid boundary by some percentage or a specific distance beyond measured skeletal coordinates). As the shape changes, the resulting changes in segment mass, center of mass (CM), and moments of inertia can be recomputed immediately. Volumes of reduced or increased density can be embedded to represent lungs, bones, or other structures within the body. The method was validated by reconstructing an ostrich body from a fleshed and defleshed carcass and comparing the estimated dimensions to empirically measured values from the original carcass. We then used the method to calculate the segmental masses, centers of mass, and moments of inertia for an adult Tyrannosaurus rex, with measurements taken directly from a complete skeleton. We compare these results to other estimates, using the model to compute the sensitivities of unknown parameter values based upon 30 different combinations of trunk, lung and air sac, and hindlimb dimensions. The conclusion that T. rex was not an exceptionally fast runner remains strongly supported by our models-the main area of ambiguity for estimating running ability seems to be estimating fascicle lengths, not body dimensions. Additionally, the

  11. 3-D Seismic Interpretation

    NASA Astrophysics Data System (ADS)

    Moore, Gregory F.

    2009-05-01

    This volume is a brief introduction aimed at those who wish to gain a basic and relatively quick understanding of the interpretation of three-dimensional (3-D) seismic reflection data. The book is well written, clearly illustrated, and easy to follow. Enough elementary mathematics are presented for a basic understanding of seismic methods, but more complex mathematical derivations are avoided. References are listed for readers interested in more advanced explanations. After a brief introduction, the book logically begins with a succinct chapter on modern 3-D seismic data acquisition and processing. Standard 3-D acquisition methods are presented, and an appendix expands on more recent acquisition techniques, such as multiple-azimuth and wide-azimuth acquisition. Although this chapter covers the basics of standard time processing quite well, there is only a single sentence about prestack depth imaging, and anisotropic processing is not mentioned at all, even though both techniques are now becoming standard.

  12. Radiochromic 3D Detectors

    NASA Astrophysics Data System (ADS)

    Oldham, Mark

    2015-01-01

    Radiochromic materials exhibit a colour change when exposed to ionising radiation. Radiochromic film has been used for clinical dosimetry for many years and increasingly so recently, as films of higher sensitivities have become available. The two principle advantages of radiochromic dosimetry include greater tissue equivalence (radiologically) and the lack of requirement for development of the colour change. In a radiochromic material, the colour change arises direct from ionising interactions affecting dye molecules, without requiring any latent chemical, optical or thermal development, with important implications for increased accuracy and convenience. It is only relatively recently however, that 3D radiochromic dosimetry has become possible. In this article we review recent developments and the current state-of-the-art of 3D radiochromic dosimetry, and the potential for a more comprehensive solution for the verification of complex radiation therapy treatments, and 3D dose measurement in general.

  13. Bootstrapping 3D fermions

    DOE PAGES

    Iliesiu, Luca; Kos, Filip; Poland, David; ...

    2016-03-17

    We study the conformal bootstrap for a 4-point function of fermions <ψψψψ> in 3D. We first introduce an embedding formalism for 3D spinors and compute the conformal blocks appearing in fermion 4-point functions. Using these results, we find general bounds on the dimensions of operators appearing in the ψ × ψ OPE, and also on the central charge CT. We observe features in our bounds that coincide with scaling dimensions in the GrossNeveu models at large N. Finally, we also speculate that other features could coincide with a fermionic CFT containing no relevant scalar operators.

  14. Bootstrapping 3D fermions

    SciTech Connect

    Iliesiu, Luca; Kos, Filip; Poland, David; Pufu, Silviu S.; Simmons-Duffin, David; Yacoby, Ran

    2016-03-17

    We study the conformal bootstrap for a 4-point function of fermions <ψψψψ> in 3D. We first introduce an embedding formalism for 3D spinors and compute the conformal blocks appearing in fermion 4-point functions. Using these results, we find general bounds on the dimensions of operators appearing in the ψ × ψ OPE, and also on the central charge CT. We observe features in our bounds that coincide with scaling dimensions in the GrossNeveu models at large N. Finally, we also speculate that other features could coincide with a fermionic CFT containing no relevant scalar operators.

  15. Numerical Analysis of Three-Dimensional Cervical Behaviors in Posterior-Oblique Car Collisions Using 3-D Human Whole Body Finite Element Model

    NASA Astrophysics Data System (ADS)

    Kang, Yu-Bong; Jung, Duk-Young; Tanaka, Masatoshi; Yoshino, Nobuyuki; Tsutsumi, Sadami; Ikeuchi, Ken

    Whiplash injuries are most common disorders in rear-end car accidents, while the injury mechanism is yet unknown. Many numerical and experimental approaches have conducted to investigate the cervical behaviors with solely two-dimensional analyses in the sagittal plane. In real accidents, however, as impacts may affect several directions, the cervical behaviors should be evaluated three-dimensionally. Therefore, we evaluated the cervical behaviors under assumption of the posterior-oblique impacts depending on the impact angles with 3-D FE analysis. In addition, we analyzed the stresses occurred in the facet joints considering the relationship with a whiplash disorders. The cervical behaviors showed complex motion combined with axial torsion and lateral bending. The bending angle peaked in the impact at the angle of 15°, and the peak compressive and shear stress on the facet cartilage at C6-C7 increased by 11% and 14%. In the impact at the angle of 30°, the torsion angle peaked at C2-C3, the peak shear stress in the facet cartilage increased by 27%. It showed that the torsion and lateral bending affected the cervical behaviors, and caused the increase of peak stresses on the soft tissues. It is assumed as one of important causes of whiplash injury.

  16. SU-E-J-209: Verification of 3D Surface Registration Between Stereograms and CT Images

    SciTech Connect

    Han, T; Gifford, K; Smith, B; Salehpour, M

    2014-06-01

    Purpose: Stereography can provide a visualization of the skin surface for radiation therapy patients. The aim of this study was to verify the registration algorithm in a commercial image analysis software, 3dMDVultus, for the fusion of stereograms and CT images. Methods: CT and stereographic scans were acquired of a head phantom and a deformable phantom. CT images were imported in 3dMDVultus and the surface contours were generated by threshold segmentation. Stereograms were reconstructed in 3dMDVultus. The resulting surfaces were registered with Vultus algorithm and then exported to in-house registration software and compared with four algorithms: rigid, affine, non-rigid iterative closest point (ICP) and b-spline algorithm. RMS (root-mean-square residuals of the surface point distances) error between the registered CT and stereogram surfaces was calculated and analyzed. Results: For the head phantom, the maximum RMS error between registered CT surfaces to stereogram was 6.6 mm for Vultus algorithm, whereas the mean RMS error was 0.7 mm. For the deformable phantom, the maximum RMS error was 16.2 mm for Vultus algorithm, whereas the mean RMS error was 4.4 mm. Non-rigid ICP demonstrated the best registration accuracy, as the mean of RMS errors were both within 1 mm. Conclusion: The accuracy of registration algorithm in 3dMDVultus was verified and exceeded RMS of 2 mm for deformable cases. Non-rigid ICP and b-spline algorithms improve the registration accuracy for both phantoms, especially in deformable one. For those patients whose body habitus deforms during radiation therapy, more advanced nonrigid algorithms need to be used.

  17. Venus in 3D

    NASA Technical Reports Server (NTRS)

    Plaut, Jeffrey J.

    1993-01-01

    Stereographic images of the surface of Venus which enable geologists to reconstruct the details of the planet's evolution are discussed. The 120-meter resolution of these 3D images make it possible to construct digital topographic maps from which precise measurements can be made of the heights, depths, slopes, and volumes of geologic structures.

  18. Electrotactile vision substitution for 3D trajectory following.

    PubMed

    Chekhchoukh, A; Goumidi, M; Vuillerme, N; Payan, Y; Glade, N

    2013-01-01

    Navigation for blind persons represents a challenge for researchers in vision substitution. In this field, one of the used techniques to navigate is guidance. In this study, we develop a new approach for 3D trajectory following in which the requested task is to track a light path using computer input devices (keyboard and mouse) or a rigid body handled in front of a stereoscopic camera. The light path is visualized either on direct vision or by way of a electro-stimulation device, the Tongue Display Unit, a 12 × 12 matrix of electrodes. We improve our method by a series of experiments in which the effect of the modality of perception and that of the input device. Preliminary results indicated a close correlation between the stimulated and recorded trajectories.

  19. 3D photoacoustic imaging

    NASA Astrophysics Data System (ADS)

    Carson, Jeffrey J. L.; Roumeliotis, Michael; Chaudhary, Govind; Stodilka, Robert Z.; Anastasio, Mark A.

    2010-06-01

    Our group has concentrated on development of a 3D photoacoustic imaging system for biomedical imaging research. The technology employs a sparse parallel detection scheme and specialized reconstruction software to obtain 3D optical images using a single laser pulse. With the technology we have been able to capture 3D movies of translating point targets and rotating line targets. The current limitation of our 3D photoacoustic imaging approach is its inability ability to reconstruct complex objects in the field of view. This is primarily due to the relatively small number of projections used to reconstruct objects. However, in many photoacoustic imaging situations, only a few objects may be present in the field of view and these objects may have very high contrast compared to background. That is, the objects have sparse properties. Therefore, our work had two objectives: (i) to utilize mathematical tools to evaluate 3D photoacoustic imaging performance, and (ii) to test image reconstruction algorithms that prefer sparseness in the reconstructed images. Our approach was to utilize singular value decomposition techniques to study the imaging operator of the system and evaluate the complexity of objects that could potentially be reconstructed. We also compared the performance of two image reconstruction algorithms (algebraic reconstruction and l1-norm techniques) at reconstructing objects of increasing sparseness. We observed that for a 15-element detection scheme, the number of measureable singular vectors representative of the imaging operator was consistent with the demonstrated ability to reconstruct point and line targets in the field of view. We also observed that the l1-norm reconstruction technique, which is known to prefer sparseness in reconstructed images, was superior to the algebraic reconstruction technique. Based on these findings, we concluded (i) that singular value decomposition of the imaging operator provides valuable insight into the capabilities of

  20. Abdominal rigidity

    MedlinePlus

    Rigidity of the abdomen ... is a sore area inside the belly or abdomen, the pain will get worse when a hand ... Causes can include: Abscess inside the abdomen Appendicitis ... small intestine, large bowel, or gallbladder ( gastrointestinal ...

  1. An automated image-based method of 3D subject-specific body segment parameter estimation for kinetic analyses of rapid movements.

    PubMed

    Sheets, Alison L; Corazza, Stefano; Andriacchi, Thomas P

    2010-01-01

    Accurate subject-specific body segment parameters (BSPs) are necessary to perform kinetic analyses of human movements with large accelerations, or no external contact forces or moments. A new automated topographical image-based method of estimating segment mass, center of mass (CM) position, and moments of inertia is presented. Body geometry and volume were measured using a laser scanner, then an automated pose and shape registration algorithm segmented the scanned body surface, and identified joint center (JC) positions. Assuming the constant segment densities of Dempster, thigh and shank masses, CM locations, and moments of inertia were estimated for four male subjects with body mass indexes (BMIs) of 19.7-38.2. The subject-specific BSP were compared with those determined using Dempster and Clauser regression equations. The influence of BSP and BMI differences on knee and hip net forces and moments during a running swing phase were quantified for the subjects with the smallest and largest BMIs. Subject-specific BSP for 15 body segments were quickly calculated using the image-based method, and total subject masses were overestimated by 1.7-2.9%.When compared with the Dempster and Clauser methods, image-based and regression estimated thigh BSP varied more than the shank parameters. Thigh masses and hip JC to thigh CM distances were consistently larger, and each transverse moment of inertia was smaller using the image-based method. Because the shank had larger linear and angular accelerations than the thigh during the running swing phase, shank BSP differences had a larger effect on calculated intersegmental forces and moments at the knee joint than thigh BSP differences did at the hip. It was the net knee kinetic differences caused by the shank BSP differences that were the largest contributors to the hip variations. Finally, BSP differences produced larger kinetic differences for the subject with larger segment masses, suggesting that parameter accuracy is more

  2. Modelling of InSAR (LOS) changes by means of 3D extended pressured bodies with free geometry. Application to Campi Flegrei.

    NASA Astrophysics Data System (ADS)

    Camacho, Antonio. G.; Fernandez, Jose; Gonzalez, Pablo J.; Berrino, Giovanna

    2010-05-01

    InSAR measures can provide information about changes in distance between the ground and the satellite in radar line-of-sight (LOS) direction. Sometimes, as in the case of volcanic activity, the corresponding ground deformations can be modeled by means of pressure and/or mass sources. Usually, point sources and regular prolate or oblate bodies are used as source geometry for deformation. In this communication, we show a new method for non-linear inversion of position and gravity changes as produced by extended bodies with a free geometry. Their structures are described as aggregation of elemental sources with anomalous density and pressure, and they are modeled to fit the whole data and to keep some regularity conditions. A growth process permits to build general geometrical configurations. The method is tested by application to data of gravity and InSAR (LOS data for ascending and descending orbits) for the volcanic area of Campi Flegrei (Italy). Results are drawn with respect a structural gravimetric model and compared with previous models.

  3. Documentation of program COORDC to generate and coordinate system for 3D corners with or without fillet using body fitted curvilinear coordinates, part 2

    NASA Technical Reports Server (NTRS)

    Kumar, D.

    1980-01-01

    The computer program COORDC generates a body fitted curvilinear coordinate system for corner geometry with or without corner fillets. It is assumed that at any given xi, x remains constant; consequently the only variation is in y and z. It is also assumed that for all xi's in the physical plane the coordinate system in y-z plane is similar. This enables solution of coordinate system for one particular xi = 1 (x for xi = 1 is arbitrarily chosen to be 0.0) and the solution for all other xi plane can be easily specified once the coordinates in the physical plane on the line 1 or = to xi or = to IMAX, eta = 1, zeta = 1 are specified.

  4. Investigating Global 3-D Shear-Wave Anisotropy in the Earth's Mantle from Free Oscillations, Body Waves, Surface Waves and Long-period Waveforms

    NASA Astrophysics Data System (ADS)

    Moulik, P.; Ekstrom, G.

    2012-12-01

    We have developed a framework that can be used to investigate anisotropic velocity, density and anelastic heterogeneity in the Earth's mantle using a wide spectrum (0.3-50 mHz) of seismological observables. We start with the extensive dataset of surface-wave phase anomalies, long-period waveforms, and body-wave travel times collected by Kustowski et al. (2008) for the development of the global model S362ANI. The additional data included in our analysis are splitting functions of spheroidal and toroidal modes, which are analogous to phase velocity maps at low frequencies. We include in this set of observations a new dataset containing the splitting functions of 56 spheroidal fundamental modes and overtones, measured by Deuss et al. (2011, 2012) using data from large recent earthquakes. Apart from providing unique constraints on the long-wavelength elastic and density structure in the mantle, the overtone splitting data are especially sensitive to the velocity (and anisotropic) structure in the transition zone and in the deeper mantle. The detection of anisotropy, a marker of flow, in the transition zone has implications for our understanding of mantle convection. Our forward modeling of the splitting functions, like the other types of data, includes the effects of radial anisotropy (Mochizuki, 1986). We show that the upper-mantle shear-wave anisotropy of S362ANI generates a clear contribution to the splitting functions of the modes that are sensitive to the upper-mantle structure. We explore the tradeoffs between fitting the mode splitting functions and the travel-times of body waves that turn in the transition zone or in the lower mantle (e.g. SS), while observing that the waveforms and the surface wave phase-anomalies provide complementary information about the mantle. Our experiments suggest that the splitting data are sufficiently sensitive to the anisotropy in the mantle such that their inclusion may provide a better depth resolution of the anisotropic shear

  5. Optical 3D surface digitizing in forensic medicine: 3D documentation of skin and bone injuries.

    PubMed

    Thali, Michael J; Braun, Marcel; Dirnhofer, Richard

    2003-11-26

    Photography process reduces a three-dimensional (3D) wound to a two-dimensional level. If there is a need for a high-resolution 3D dataset of an object, it needs to be three-dimensionally scanned. No-contact optical 3D digitizing surface scanners can be used as a powerful tool for wound and injury-causing instrument analysis in trauma cases. The 3D skin wound and a bone injury documentation using the optical scanner Advanced TOpometric Sensor (ATOS II, GOM International, Switzerland) will be demonstrated using two illustrative cases. Using this 3D optical digitizing method the wounds (the virtual 3D computer model of the skin and the bone injuries) and the virtual 3D model of the injury-causing tool are graphically documented in 3D in real-life size and shape and can be rotated in the CAD program on the computer screen. In addition, the virtual 3D models of the bone injuries and tool can now be compared in a 3D CAD program against one another in virtual space, to see if there are matching areas. Further steps in forensic medicine will be a full 3D surface documentation of the human body and all the forensic relevant injuries using optical 3D scanners.

  6. Experimental and analytical investigation of inertial propulsion mechanisms and motion simulation of rigid multi-body mechanical systems

    NASA Astrophysics Data System (ADS)

    Almesallmy, Mohammed

    Methodologies are developed for dynamic analysis of mechanical systems with emphasis on inertial propulsion systems. This work adopted the Lagrangian methodology. Lagrangian methodology is the most efficient classical computational technique, which we call Equations of Motion Code (EOMC). The EOMC is applied to several simple dynamic mechanical systems for easier understanding of the method and to aid other investigators in developing equations of motion of any dynamic system. In addition, it is applied to a rigid multibody system, such as Thomson IPS [Thomson 1986]. Furthermore, a simple symbolic algorithm is developed using Maple software, which can be used to convert any nonlinear n-order ordinary differential equation (ODE) systems into 1st-order ODE system in ready format to be used in Matlab software. A side issue, but equally important, we have started corresponding with the U.S. Patent office to persuade them that patent applications, claiming gross linear motion based on inertial propulsion systems should be automatically rejected. The precedent is rejection of patent applications involving perpetual motion machines.

  7. 3D reconstruction with two webcams and a laser line projector

    NASA Astrophysics Data System (ADS)

    Li, Dongdong; Hui, Bingwei; Qiu, Shaohua; Wen, Gongjian

    2014-09-01

    Three-dimensional (3D) reconstruction is one of the most attractive research topics in photogrammetry and computer vision. Nowadays 3D reconstruction with simple and consumable equipment plays an important role. In this paper, a 3D reconstruction desktop system is built based on binocular stereo vision using a laser scanner. The hardware requirements are a simple commercial hand-held laser line projector and two common webcams for image acquisition. Generally, 3D reconstruction based on passive triangulation methods requires point correspondences among various viewpoints. The development of matching algorithms remains a challenging task in computer vision. In our proposal, with the help of a laser line projector, stereo correspondences are established robustly from epipolar geometry and the laser shadow on the scanned object. To establish correspondences more conveniently, epipolar rectification is employed using Bouguet's method after stereo calibration with a printed chessboard. 3D coordinates of the observed points are worked out with rayray triangulation and reconstruction outliers are removed with the planarity constraint of the laser plane. Dense 3D point clouds are derived from multiple scans under different orientations. Each point cloud is derived by sweeping the laser plane across the object requiring 3D reconstruction. The Iterative Closest Point algorithm is employed to register the derived point clouds. Rigid body transformation between neighboring scans is obtained to get the complete 3D point cloud. Finally polygon meshes are reconstructed from the derived point cloud and color images are used in texture mapping to get a lifelike 3D model. Experiments show that our reconstruction method is simple and efficient.

  8. Twin Peaks - 3D

    NASA Technical Reports Server (NTRS)

    1997-01-01

    The two hills in the distance, approximately one to two kilometers away, have been dubbed the 'Twin Peaks' and are of great interest to Pathfinder scientists as objects of future study. 3D glasses are necessary to identify surface detail. The white areas on the left hill, called the 'Ski Run' by scientists, may have been formed by hydrologic processes.

    The IMP is a stereo imaging system with color capability provided by 24 selectable filters -- twelve filters per 'eye.

    Click below to see the left and right views individually. [figure removed for brevity, see original site] Left [figure removed for brevity, see original site] Right

  9. 3D and beyond

    NASA Astrophysics Data System (ADS)

    Fung, Y. C.

    1995-05-01

    This conference on physiology and function covers a wide range of subjects, including the vasculature and blood flow, the flow of gas, water, and blood in the lung, the neurological structure and function, the modeling, and the motion and mechanics of organs. Many technologies are discussed. I believe that the list would include a robotic photographer, to hold the optical equipment in a precisely controlled way to obtain the images for the user. Why are 3D images needed? They are to achieve certain objectives through measurements of some objects. For example, in order to improve performance in sports or beauty of a person, we measure the form, dimensions, appearance, and movements.

  10. 3D Audio System

    NASA Technical Reports Server (NTRS)

    1992-01-01

    Ames Research Center research into virtual reality led to the development of the Convolvotron, a high speed digital audio processing system that delivers three-dimensional sound over headphones. It consists of a two-card set designed for use with a personal computer. The Convolvotron's primary application is presentation of 3D audio signals over headphones. Four independent sound sources are filtered with large time-varying filters that compensate for motion. The perceived location of the sound remains constant. Possible applications are in air traffic control towers or airplane cockpits, hearing and perception research and virtual reality development.

  11. List-mode-based reconstruction for respiratory motion correction in PET using non-rigid body transformations.

    PubMed

    Lamare, F; Ledesma Carbayo, M J; Cresson, T; Kontaxakis, G; Santos, A; Le Rest, C Cheze; Reader, A J; Visvikis, D

    2007-09-07

    Respiratory motion in emission tomography leads to reduced image quality. Developed correction methodology has been concentrating on the use of respiratory synchronized acquisitions leading to gated frames. Such frames, however, are of low signal-to-noise ratio as a result of containing reduced statistics. In this work, we describe the implementation of an elastic transformation within a list-mode-based reconstruction for the correction of respiratory motion over the thorax, allowing the use of all data available throughout a respiratory motion average acquisition. The developed algorithm was evaluated using datasets of the NCAT phantom generated at different points throughout the respiratory cycle. List-mode-data-based PET-simulated frames were subsequently produced by combining the NCAT datasets with Monte Carlo simulation. A non-rigid registration algorithm based on B-spline basis functions was employed to derive transformation parameters accounting for the respiratory motion using the NCAT dynamic CT images. The displacement matrices derived were subsequently applied during the image reconstruction of the original emission list mode data. Two different implementations for the incorporation of the elastic transformations within the one-pass list mode EM (OPL-EM) algorithm were developed and evaluated. The corrected images were compared with those produced using an affine transformation of list mode data prior to reconstruction, as well as with uncorrected respiratory motion average images. Results demonstrate that although both correction techniques considered lead to significant improvements in accounting for respiratory motion artefacts in the lung fields, the elastic-transformation-based correction leads to a more uniform improvement across the lungs for different lesion sizes and locations.

  12. Improved Accuracy in RNA-Protein Rigid Body Docking by Incorporating Force Field for Molecular Dynamics Simulation into the Scoring Function.

    PubMed

    Iwakiri, Junichi; Hamada, Michiaki; Asai, Kiyoshi; Kameda, Tomoshi

    2016-09-13

    RNA-protein interactions play fundamental roles in many biological processes. To understand these interactions, it is necessary to know the three-dimensional structures of RNA-protein complexes. However, determining the tertiary structure of these complexes is often difficult, suggesting that an accurate rigid body docking for RNA-protein complexes is needed. In general, the rigid body docking process is divided into two steps: generating candidate structures from the individual RNA and protein structures and then narrowing down the candidates. In this study, we focus on the former problem to improve the prediction accuracy in RNA-protein docking. Our method is based on the integration of physicochemical information about RNA into ZDOCK, which is known as one of the most successful computer programs for protein-protein docking. Because recent studies showed the current force field for molecular dynamics simulation of protein and nucleic acids is quite accurate, we modeled the physicochemical information about RNA by force fields such as AMBER and CHARMM. A comprehensive benchmark of RNA-protein docking, using three recently developed data sets, reveals the remarkable prediction accuracy of the proposed method compared with existing programs for docking: the highest success rate is 34.7% for the predicted structure of the RNA-protein complex with the best score and 79.2% for 3,600 predicted ones. Three full atomistic force fields for RNA (AMBER94, AMBER99, and CHARMM22) produced almost the same accurate result, which showed current force fields for nucleic acids are quite accurate. In addition, we found that the electrostatic interaction and the representation of shape complementary between protein and RNA plays the important roles for accurate prediction of the native structures of RNA-protein complexes.

  13. Defining the limits and reliability of rigid-body fitting in cryo-EM maps using multi-scale image pyramids.

    PubMed

    van Zundert, G C P; Bonvin, A M J J

    2016-08-01

    Cryo-electron microscopy provides fascinating structural insight into large macromolecular machines at increasing detail. Despite significant advances in the field, the resolution of the resulting three-dimensional images is still typically insufficient for de novo model building. To bridge the resolution gap and give an atomic interpretation to the data, high-resolution models are typically placed into the density as rigid bodies. Unfortunately, this is often done manually using graphics software, a subjective method that can lead to over-interpretation of the data. A more objective approach is to perform an exhaustive cross-correlation-based search to fit subunits into the density. Here we show, using five experimental ribosome maps ranging in resolution from 5.5 to 6.9Å, that cross-correlation-based fitting is capable of successfully fitting subunits correctly in the density for over 90% of the cases. Importantly, we provide indicators for the reliability and ambiguity of a fit, using the Fisher z-transformation and its associated confidence intervals, giving a formal approach to identify over-interpreted regions in the density. In addition, we quantify the resolution requirement for a successful fit as a function of the subunit size. For larger subunits the resolution of the data can be down-filtered to 20Å while still retaining an unambiguous fit. We leverage this information through the use of multi-scale image pyramids to accelerate the search up to 30-fold on CPUs and 40-fold on GPUs at a negligible loss in success rate. We implemented this approach in our rigid-body fitting software PowerFit, which can be freely downloaded from https://github.com/haddocking/powerfit.

  14. NIKE3D96. Static & Dynamic Response of 3D Solids

    SciTech Connect

    Maker, B.; Hallquist, J.O.; Ferencz, R.M.

    1991-02-01

    NIKE3D is a large deformations 3D finite element code used to obtain the resulting displacements and stresses from multi-body static and dynamic structural thermo-mechanics problems with sliding interfaces. Many nonlinear and temperature dependent constitutive models are available.

  15. 3D Surgical Simulation

    PubMed Central

    Cevidanes, Lucia; Tucker, Scott; Styner, Martin; Kim, Hyungmin; Chapuis, Jonas; Reyes, Mauricio; Proffit, William; Turvey, Timothy; Jaskolka, Michael

    2009-01-01

    This paper discusses the development of methods for computer-aided jaw surgery. Computer-aided jaw surgery allows us to incorporate the high level of precision necessary for transferring virtual plans into the operating room. We also present a complete computer-aided surgery (CAS) system developed in close collaboration with surgeons. Surgery planning and simulation include construction of 3D surface models from Cone-beam CT (CBCT), dynamic cephalometry, semi-automatic mirroring, interactive cutting of bone and bony segment repositioning. A virtual setup can be used to manufacture positioning splints for intra-operative guidance. The system provides further intra-operative assistance with the help of a computer display showing jaw positions and 3D positioning guides updated in real-time during the surgical procedure. The CAS system aids in dealing with complex cases with benefits for the patient, with surgical practice, and for orthodontic finishing. Advanced software tools for diagnosis and treatment planning allow preparation of detailed operative plans, osteotomy repositioning, bone reconstructions, surgical resident training and assessing the difficulties of the surgical procedures prior to the surgery. CAS has the potential to make the elaboration of the surgical plan a more flexible process, increase the level of detail and accuracy of the plan, yield higher operative precision and control, and enhance documentation of cases. Supported by NIDCR DE017727, and DE018962 PMID:20816308

  16. Martian terrain - 3D

    NASA Technical Reports Server (NTRS)

    1997-01-01

    An area of rocky terrain near the landing site of the Sagan Memorial Station can be seen in this image, taken in stereo by the Imager for Mars Pathfinder (IMP) on Sol 3. 3D glasses are necessary to identify surface detail. This image is part of a 3D 'monster' panorama of the area surrounding the landing site.

    Mars Pathfinder is the second in NASA's Discovery program of low-cost spacecraft with highly focused science goals. The Jet Propulsion Laboratory, Pasadena, CA, developed and manages the Mars Pathfinder mission for NASA's Office of Space Science, Washington, D.C. JPL is an operating division of the California Institute of Technology (Caltech). The Imager for Mars Pathfinder (IMP) was developed by the University of Arizona Lunar and Planetary Laboratory under contract to JPL. Peter Smith is the Principal Investigator.

    Click below to see the left and right views individually. [figure removed for brevity, see original site] Left [figure removed for brevity, see original site] Right

  17. Biquaternion solution of the kinematic control problem for the motion of a rigid body and its application to the solution of inverse problems of robot-manipulator kinematics

    NASA Astrophysics Data System (ADS)

    Chelnokov, Yu. N.

    2013-01-01

    The problem of reducing the body-attached coordinate system to the reference (programmed) coordinate system moving relative to the fixed coordinate system with a given instantaneous velocity screw along a given trajectory is considered in the kinematic statement. The biquaternion kinematic equations of motion of a rigid body in normalized and unnormalized finite displacement biquaternions are used as the mathematical model of motion, and the dual orthogonal projections of the instantaneous velocity screw of the body motion onto the body coordinate axes are used as the control. Various types of correction (stabilization), which are biquaternion analogs of position and integral corrections, are proposed. It is shown that the linear (obtained without linearization) and stationary biquaternion error equations that are invariant under any chosen programmed motion of the reference coordinate system can be obtained for the proposed types of correction and the use of unnormalized finite displacement biquaternions and four-dimensional dual controls allows one to construct globally regular control laws. The general solution of the error equation is constructed, and conditions for asymptotic stability of the programmed motion are obtained. The constructed theory of kinematic control of motion is used to solve inverse problems of robot-manipulator kinematics. The control problem under study is a generalization of the kinematic problem [1, 2] of reducing the body-attached coordinate system to the reference coordinate system rotating at a given (programmed) absolute angular velocity, and the presentedmethod for solving inverse problems of robotmanipulator kinematics is a development of the method proposed in [3-5].

  18. 3D field harmonics

    SciTech Connect

    Caspi, S.; Helm, M.; Laslett, L.J.

    1991-03-30

    We have developed an harmonic representation for the three dimensional field components within the windings of accelerator magnets. The form by which the field is presented is suitable for interfacing with other codes that make use of the 3D field components (particle tracking and stability). The field components can be calculated with high precision and reduced cup time at any location (r,{theta},z) inside the magnet bore. The same conductor geometry which is used to simulate line currents is also used in CAD with modifications more readily available. It is our hope that the format used here for magnetic fields can be used not only as a means of delivering fields but also as a way by which beam dynamics can suggest correction to the conductor geometry. 5 refs., 70 figs.

  19. Accurate positioning for head and neck cancer patients using 2D and 3D image guidance

    PubMed Central

    Kang, Hyejoo; Lovelock, Dale M.; Yorke, Ellen D.; Kriminiski, Sergey; Lee, Nancy; Amols, Howard I.

    2011-01-01

    Our goal is to determine an optimized image-guided setup by comparing setup errors determined by two-dimensional (2D) and three-dimensional (3D) image guidance for head and neck cancer (HNC) patients immobilized by customized thermoplastic masks. Nine patients received weekly imaging sessions, for a total of 54, throughout treatment. Patients were first set up by matching lasers to surface marks (initial) and then translationally corrected using manual registration of orthogonal kilovoltage (kV) radiographs with DRRs (2D-2D) on bony anatomy. A kV cone beam CT (kVCBCT) was acquired and manually registered to the simulation CT using only translations (3D-3D) on the same bony anatomy to determine further translational corrections. After treatment, a second set of kVCBCT was acquired to assess intrafractional motion. Averaged over all sessions, 2D-2D registration led to translational corrections from initial setup of 3.5 ± 2.2 (range 0–8) mm. The addition of 3D-3D registration resulted in only small incremental adjustment (0.8 ± 1.5 mm). We retrospectively calculated patient setup rotation errors using an automatic rigid-body algorithm with 6 degrees of freedom (DoF) on regions of interest (ROI) of in-field bony anatomy (mainly the C2 vertebral body). Small rotations were determined for most of the imaging sessions; however, occasionally rotations > 3° were observed. The calculated intrafractional motion with automatic registration was < 3.5 mm for eight patients, and < 2° for all patients. We conclude that daily manual 2D-2D registration on radiographs reduces positioning errors for mask-immobilized HNC patients in most cases, and is easily implemented. 3D-3D registration adds little improvement over 2D-2D registration without correcting rotational errors. We also conclude that thermoplastic masks are effective for patient immobilization. PMID:21330971

  20. A parametric study of the behavior of the angular momentum vector during spin rate changes of rigid body spacecraft

    NASA Technical Reports Server (NTRS)

    Longuski, J. M.

    1982-01-01

    During a spin-up or spin-down maneuver of a spinning spacecraft, it is usual to have not only a constant body-fixed torque about the desired spin axis, but also small undesired constant torques about the transverse axes. This causes the orientation of the angular momentum vector to change in inertial space. Since an analytic solution is available for the angular momentum vector as a function of time, this behavior can be studied for large variations of the dynamic parameters, such as the initial spin rate, the inertial properties and the torques. As an example, the spin-up and spin-down maneuvers of the Galileo spacecraft was studied and as a result, very simple heuristic solutions were discovered which provide very good approximations to the parametric behavior of the angular momentum vector orientation.

  1. 3D indoor modeling using a hand-held embedded system with multiple laser range scanners

    NASA Astrophysics Data System (ADS)

    Hu, Shaoxing; Wang, Duhu; Xu, Shike

    2016-10-01

    Accurate three-dimensional perception is a key technology for many engineering applications, including mobile mapping, obstacle detection and virtual reality. In this article, we present a hand-held embedded system designed for constructing 3D representation of structured indoor environments. Different from traditional vehicle-borne mobile mapping methods, the system presented here is capable of efficiently acquiring 3D data while an operator carrying the device traverses through the site. It consists of a simultaneous localization and mapping(SLAM) module, a 3D attitude estimate module and a point cloud processing module. The SLAM is based on a scan matching approach using a modern LIDAR system, and the 3D attitude estimate is generated by a navigation filter using inertial sensors. The hardware comprises three 2D time-flight laser range finders and an inertial measurement unit(IMU). All the sensors are rigidly mounted on a body frame. The algorithms are developed on the frame of robot operating system(ROS). The 3D model is constructed using the point cloud library(PCL). Multiple datasets have shown robust performance of the presented system in indoor scenarios.

  2. Intraoral 3D scanner

    NASA Astrophysics Data System (ADS)

    Kühmstedt, Peter; Bräuer-Burchardt, Christian; Munkelt, Christoph; Heinze, Matthias; Palme, Martin; Schmidt, Ingo; Hintersehr, Josef; Notni, Gunther

    2007-09-01

    Here a new set-up of a 3D-scanning system for CAD/CAM in dental industry is proposed. The system is designed for direct scanning of the dental preparations within the mouth. The measuring process is based on phase correlation technique in combination with fast fringe projection in a stereo arrangement. The novelty in the approach is characterized by the following features: A phase correlation between the phase values of the images of two cameras is used for the co-ordinate calculation. This works contrary to the usage of only phase values (phasogrammetry) or classical triangulation (phase values and camera image co-ordinate values) for the determination of the co-ordinates. The main advantage of the method is that the absolute value of the phase at each point does not directly determine the coordinate. Thus errors in the determination of the co-ordinates are prevented. Furthermore, using the epipolar geometry of the stereo-like arrangement the phase unwrapping problem of fringe analysis can be solved. The endoscope like measurement system contains one projection and two camera channels for illumination and observation of the object, respectively. The new system has a measurement field of nearly 25mm × 15mm. The user can measure two or three teeth at one time. So the system can by used for scanning of single tooth up to bridges preparations. In the paper the first realization of the intraoral scanner is described.

  3. 'Diamond' in 3-D

    NASA Technical Reports Server (NTRS)

    2004-01-01

    This 3-D, microscopic imager mosaic of a target area on a rock called 'Diamond Jenness' was taken after NASA's Mars Exploration Rover Opportunity ground into the surface with its rock abrasion tool for a second time.

    Opportunity has bored nearly a dozen holes into the inner walls of 'Endurance Crater.' On sols 177 and 178 (July 23 and July 24, 2004), the rover worked double-duty on Diamond Jenness. Surface debris and the bumpy shape of the rock resulted in a shallow and irregular hole, only about 2 millimeters (0.08 inch) deep. The final depth was not enough to remove all the bumps and leave a neat hole with a smooth floor. This extremely shallow depression was then examined by the rover's alpha particle X-ray spectrometer.

    On Sol 178, Opportunity's 'robotic rodent' dined on Diamond Jenness once again, grinding almost an additional 5 millimeters (about 0.2 inch). The rover then applied its Moessbauer spectrometer to the deepened hole. This double dose of Diamond Jenness enabled the science team to examine the rock at varying layers. Results from those grindings are currently being analyzed.

    The image mosaic is about 6 centimeters (2.4 inches) across.

  4. Prominent rocks - 3D

    NASA Technical Reports Server (NTRS)

    1997-01-01

    Many prominent rocks near the Sagan Memorial Station are featured in this image, taken in stereo by the Imager for Mars Pathfinder (IMP) on Sol 3. 3D glasses are necessary to identify surface detail. Wedge is at lower left; Shark, Half-Dome, and Pumpkin are at center. Flat Top, about four inches high, is at lower right. The horizon in the distance is one to two kilometers away.

    Mars Pathfinder is the second in NASA's Discovery program of low-cost spacecraft with highly focused science goals. The Jet Propulsion Laboratory, Pasadena, CA, developed and manages the Mars Pathfinder mission for NASA's Office of Space Science, Washington, D.C. JPL is an operating division of the California Institute of Technology (Caltech). The Imager for Mars Pathfinder (IMP) was developed by the University of Arizona Lunar and Planetary Laboratory under contract to JPL. Peter Smith is the Principal Investigator.

    Click below to see the left and right views individually. [figure removed for brevity, see original site] Left [figure removed for brevity, see original site] Right

  5. A simple procedure to evaluate the efficiency of bio-macromolecular rigid-body refinement by small-angle scattering.

    PubMed

    Gabel, Frank

    2012-01-01

    A simple and rapid procedure is presented that enables evaluation and visualization of refinement efficiency for bio-macromolecular complexes consisting of two subunits in a given orientation by using small-angle scattering. Subunit orientations within a complex can be provided in practice by NMR residual dipolar couplings, an approach that has been combined with increasing success to complement small-angle data. The procedure is illustrated by applying it to several systems composed of two simple geometric bodies (ellipsoids) and to protein complexes from the protein data bank that vary in subunit size and anisometry. The effects of the experimental small-angle scattering range (Q-range) and data noise level on the refinement efficiency are investigated and discussed. The procedure can be used in two ways: (1) either as a quick preliminary test to probe the refinement capacity expected for a given bio-macromolecular complex prior to sophisticated and time-consuming experiments and data analysis, or (2) as an a posteriori check of the stability and accuracy of a refined model and for illustration of the residual degrees of freedom of the subunit positions that are in agreement with both small-angle data and restraints on subunit orientation (as provided, e.g., by NMR).

  6. 2D/3D Visual Tracker for Rover Mast

    NASA Technical Reports Server (NTRS)

    Bajracharya, Max; Madison, Richard W.; Nesnas, Issa A.; Bandari, Esfandiar; Kunz, Clayton; Deans, Matt; Bualat, Maria

    2006-01-01

    A visual-tracker computer program controls an articulated mast on a Mars rover to keep a designated feature (a target) in view while the rover drives toward the target, avoiding obstacles. Several prior visual-tracker programs have been tested on rover platforms; most require very small and well-estimated motion between consecutive image frames a requirement that is not realistic for a rover on rough terrain. The present visual-tracker program is designed to handle large image motions that lead to significant changes in feature geometry and photometry between frames. When a point is selected in one of the images acquired from stereoscopic cameras on the mast, a stereo triangulation algorithm computes a three-dimensional (3D) location for the target. As the rover moves, its body-mounted cameras feed images to a visual-odometry algorithm, which tracks two-dimensional (2D) corner features and computes their old and new 3D locations. The algorithm rejects points, the 3D motions of which are inconsistent with a rigid-world constraint, and then computes the apparent change in the rover pose (i.e., translation and rotation). The mast pan and tilt angles needed to keep the target centered in the field-of-view of the cameras (thereby minimizing the area over which the 2D-tracking algorithm must operate) are computed from the estimated change in the rover pose, the 3D position of the target feature, and a model of kinematics of the mast. If the motion between the consecutive frames is still large (i.e., 3D tracking was unsuccessful), an adaptive view-based matching technique is applied to the new image. This technique uses correlation-based template matching, in which a feature template is scaled by the ratio between the depth in the original template and the depth of pixels in the new image. This is repeated over the entire search window and the best correlation results indicate the appropriate match. The program could be a core for building application programs for systems

  7. CFL3D, FUN3d, and NSU3D Contributions to the Fifth Drag Prediction Workshop

    NASA Technical Reports Server (NTRS)

    Park, Michael A.; Laflin, Kelly R.; Chaffin, Mark S.; Powell, Nicholas; Levy, David W.

    2013-01-01

    Results presented at the Fifth Drag Prediction Workshop using CFL3D, FUN3D, and NSU3D are described. These are calculations on the workshop provided grids and drag adapted grids. The NSU3D results have been updated to reflect an improvement to skin friction calculation on skewed grids. FUN3D results generated after the workshop are included for custom participant generated grids and a grid from a previous workshop. Uniform grid refinement at the design condition shows a tight grouping in calculated drag, where the variation in the pressure component of drag is larger than the skin friction component. At this design condition, A fine-grid drag value was predicted with a smaller drag adjoint adapted grid via tetrahedral adaption to a metric and mixed-element subdivision. The buffet study produced larger variation than the design case, which is attributed to large differences in the predicted side-of-body separation extent. Various modeling and discretization approaches had a strong impact on predicted side-of-body separation. This large wing root separation bubble was not observed in wind tunnel tests indicating that more work is necessary in modeling wing root juncture flows to predict experiments.

  8. A study on a rigid body boundary layer interface force model for stress calculation and stress strain behaviour of nanoscale uniaxial tension

    NASA Astrophysics Data System (ADS)

    Lin, Zone-Ching; Huang, Jen-Ching

    2004-11-01

    A rigid body boundary layer interface force (RIF) model for stress calculation on the nanoscale is proposed in this paper for calculating stress based on molecular dynamics. The RIF model is used to study the stress-stain behaviour when nanoscale single crystal copper is under uniaxial tension, and is used for 15 tensile simulations each with different strain rate. The stress-strain curve established from simulation was first converted into a true stress-strain curve; a regression analysis was then applied in order to find the flow curve. From simulation results, it is found that the strain rate has large influence on both K and n values of the flow curve. At low strain rate (less than 1 × 1012 s-1), both K and n values decrease with the increase of strain rate. When the strain rate exceeds 1 × 1012 s-1, the strain rate against the K and n values of the flow curve approaches a constant. Flow curve equations considering the influence of strain rate are derived; both complete and simplified forms of flow curve equations are also derived. It is observed that the lower the strain rates, the higher the fluctuations of the stress-strain curve. Furthermore, the increase of strain rate resulting in a smoother stress-strain curve is also found.

  9. Regoliths in 3-D

    NASA Technical Reports Server (NTRS)

    Grant, John; Cheng, Andrew; Delamere, Allen; Gorevan, Steven; Korotev, Randy; McKay, David; Schmitt, Harrison; Zarnecki, John

    1996-01-01

    A planetary regolith is any layer of fragments, unconsolidated material that may or may not be textually or compositionally altered relative to underlying substrate and occurs on the outer surface of a solar system body. This includes fragmented material from volcanic, sedimentary, and meteoritic infall sources, and derived by any process (e.g. impact and all other endogenic or exogenic processes). Many measurements that can be made from orbit or from Earth-based observations provide information only about the uppermost portions of a regolith and not the underlying substrate(s). Thus an understanding of the formation processes, physical properties, composition, and evolution of planetary regoliths is essential in answering scientific questions posed by the Committee on Planetary and Lunar Exploration (COMPLEX). This paper provides examples of measurements required to answer these critical science questions.

  10. 2D/3D registration algorithm for lung brachytherapy

    SciTech Connect

    Zvonarev, P. S.; Farrell, T. J.; Hunter, R.; Wierzbicki, M.; Hayward, J. E.; Sur, R. K.

    2013-02-15

    Purpose: A 2D/3D registration algorithm is proposed for registering orthogonal x-ray images with a diagnostic CT volume for high dose rate (HDR) lung brachytherapy. Methods: The algorithm utilizes a rigid registration model based on a pixel/voxel intensity matching approach. To achieve accurate registration, a robust similarity measure combining normalized mutual information, image gradient, and intensity difference was developed. The algorithm was validated using a simple body and anthropomorphic phantoms. Transfer catheters were placed inside the phantoms to simulate the unique image features observed during treatment. The algorithm sensitivity to various degrees of initial misregistration and to the presence of foreign objects, such as ECG leads, was evaluated. Results: The mean registration error was 2.2 and 1.9 mm for the simple body and anthropomorphic phantoms, respectively. The error was comparable to the interoperator catheter digitization error of 1.6 mm. Preliminary analysis of data acquired from four patients indicated a mean registration error of 4.2 mm. Conclusions: Results obtained using the proposed algorithm are clinically acceptable especially considering the complications normally encountered when imaging during lung HDR brachytherapy.

  11. An Automatic Registration Algorithm for 3D Maxillofacial Model

    NASA Astrophysics Data System (ADS)

    Qiu, Luwen; Zhou, Zhongwei; Guo, Jixiang; Lv, Jiancheng

    2016-09-01

    3D image registration aims at aligning two 3D data sets in a common coordinate system, which has been widely used in computer vision, pattern recognition and computer assisted surgery. One challenging problem in 3D registration is that point-wise correspondences between two point sets are often unknown apriori. In this work, we develop an automatic algorithm for 3D maxillofacial models registration including facial surface model and skull model. Our proposed registration algorithm can achieve a good alignment result between partial and whole maxillofacial model in spite of ambiguous matching, which has a potential application in the oral and maxillofacial reparative and reconstructive surgery. The proposed algorithm includes three steps: (1) 3D-SIFT features extraction and FPFH descriptors construction; (2) feature matching using SAC-IA; (3) coarse rigid alignment and refinement by ICP. Experiments on facial surfaces and mandible skull models demonstrate the efficiency and robustness of our algorithm.

  12. Tilted planes in 3D image analysis

    NASA Astrophysics Data System (ADS)

    Pargas, Roy P.; Staples, Nancy J.; Malloy, Brian F.; Cantrell, Ken; Chhatriwala, Murtuza

    1998-03-01

    Reliable 3D wholebody scanners which output digitized 3D images of a complete human body are now commercially available. This paper describes a software package, called 3DM, being developed by researchers at Clemson University and which manipulates and extracts measurements from such images. The focus of this paper is on tilted planes, a 3DM tool which allows a user to define a plane through a scanned image, tilt it in any direction, and effectively define three disjoint regions on the image: the points on the plane and the points on either side of the plane. With tilted planes, the user can accurately take measurements required in applications such as apparel manufacturing. The user can manually segment the body rather precisely. Tilted planes assist the user in analyzing the form of the body and classifying the body in terms of body shape. Finally, titled planes allow the user to eliminate extraneous and unwanted points often generated by a 3D scanner. This paper describes the user interface for tilted planes, the equations defining the plane as the user moves it through the scanned image, an overview of the algorithms, and the interaction of the tilted plane feature with other tools in 3DM.

  13. 3D Spectroscopy in Astronomy

    NASA Astrophysics Data System (ADS)

    Mediavilla, Evencio; Arribas, Santiago; Roth, Martin; Cepa-Nogué, Jordi; Sánchez, Francisco

    2011-09-01

    Preface; Acknowledgements; 1. Introductory review and technical approaches Martin M. Roth; 2. Observational procedures and data reduction James E. H. Turner; 3. 3D Spectroscopy instrumentation M. A. Bershady; 4. Analysis of 3D data Pierre Ferruit; 5. Science motivation for IFS and galactic studies F. Eisenhauer; 6. Extragalactic studies and future IFS science Luis Colina; 7. Tutorials: how to handle 3D spectroscopy data Sebastian F. Sánchez, Begona García-Lorenzo and Arlette Pécontal-Rousset.

  14. Spherical 3D isotropic wavelets

    NASA Astrophysics Data System (ADS)

    Lanusse, F.; Rassat, A.; Starck, J.-L.

    2012-04-01

    Context. Future cosmological surveys will provide 3D large scale structure maps with large sky coverage, for which a 3D spherical Fourier-Bessel (SFB) analysis in spherical coordinates is natural. Wavelets are particularly well-suited to the analysis and denoising of cosmological data, but a spherical 3D isotropic wavelet transform does not currently exist to analyse spherical 3D data. Aims: The aim of this paper is to present a new formalism for a spherical 3D isotropic wavelet, i.e. one based on the SFB decomposition of a 3D field and accompany the formalism with a public code to perform wavelet transforms. Methods: We describe a new 3D isotropic spherical wavelet decomposition based on the undecimated wavelet transform (UWT) described in Starck et al. (2006). We also present a new fast discrete spherical Fourier-Bessel transform (DSFBT) based on both a discrete Bessel transform and the HEALPIX angular pixelisation scheme. We test the 3D wavelet transform and as a toy-application, apply a denoising algorithm in wavelet space to the Virgo large box cosmological simulations and find we can successfully remove noise without much loss to the large scale structure. Results: We have described a new spherical 3D isotropic wavelet transform, ideally suited to analyse and denoise future 3D spherical cosmological surveys, which uses a novel DSFBT. We illustrate its potential use for denoising using a toy model. All the algorithms presented in this paper are available for download as a public code called MRS3D at http://jstarck.free.fr/mrs3d.html

  15. 3D Elevation Program—Virtual USA in 3D

    USGS Publications Warehouse

    Lukas, Vicki; Stoker, J.M.

    2016-04-14

    The U.S. Geological Survey (USGS) 3D Elevation Program (3DEP) uses a laser system called ‘lidar’ (light detection and ranging) to create a virtual reality map of the Nation that is very accurate. 3D maps have many uses with new uses being discovered all the time.  

  16. 3D surface imaging of the human female torso in upright to supine positions.

    PubMed

    Reece, Gregory P; Merchant, Fatima; Andon, Johnny; Khatam, Hamed; Ravi-Chandar, K; Weston, June; Fingeret, Michelle C; Lane, Chris; Duncan, Kelly; Markey, Mia K

    2015-04-01

    Three-dimensional (3D) surface imaging of breasts is usually done with the patient in an upright position, which does not permit comparison of changes in breast morphology with changes in position of the torso. In theory, these limitations may be eliminated if the 3D camera system could remain fixed relative to the woman's torso as she is tilted from 0 to 90°. We mounted a 3dMDtorso imaging system onto a bariatric tilt table to image breasts at different tilt angles. The images were validated using a rigid plastic mannequin and the metrics compared to breast metrics obtained from five subjects with diverse morphology. The differences between distances between the same fiducial marks differed between the supine and upright positions by less than 1% for the mannequin, whereas the differences for distances between the same fiducial marks on the breasts of the five subjects differed significantly and could be correlated with body mass index and brassiere cup size for each position change. We show that a tilt table-3D imaging system can be used to determine quantitative changes in the morphology of ptotic breasts when the subject is tilted to various angles.

  17. A 3-D chimera grid embedding technique

    NASA Technical Reports Server (NTRS)

    Benek, J. A.; Buning, P. G.; Steger, J. L.

    1985-01-01

    A three-dimensional (3-D) chimera grid-embedding technique is described. The technique simplifies the construction of computational grids about complex geometries. The method subdivides the physical domain into regions which can accommodate easily generated grids. Communication among the grids is accomplished by interpolation of the dependent variables at grid boundaries. The procedures for constructing the composite mesh and the associated data structures are described. The method is demonstrated by solution of the Euler equations for the transonic flow about a wing/body, wing/body/tail, and a configuration of three ellipsoidal bodies.

  18. Improvement of registration accuracy in accelerated partial breast irradiation using the point-based rigid-body registration algorithm for patients with implanted fiducial markers

    SciTech Connect

    Inoue, Minoru; Yoshimura, Michio Sato, Sayaka; Nakamura, Mitsuhiro; Yamada, Masahiro; Hirata, Kimiko; Ogura, Masakazu; Hiraoka, Masahiro; Sasaki, Makoto; Fujimoto, Takahiro

    2015-04-15

    Purpose: To investigate image-registration errors when using fiducial markers with a manual method and the point-based rigid-body registration (PRBR) algorithm in accelerated partial breast irradiation (APBI) patients, with accompanying fiducial deviations. Methods: Twenty-two consecutive patients were enrolled in a prospective trial examining 10-fraction APBI. Titanium clips were implanted intraoperatively around the seroma in all patients. For image-registration, the positions of the clips in daily kV x-ray images were matched to those in the planning digitally reconstructed radiographs. Fiducial and gravity registration errors (FREs and GREs, respectively), representing resulting misalignments of the edge and center of the target, respectively, were compared between the manual and algorithm-based methods. Results: In total, 218 fractions were evaluated. Although the mean FRE/GRE values for the manual and algorithm-based methods were within 3 mm (2.3/1.7 and 1.3/0.4 mm, respectively), the percentages of fractions where FRE/GRE exceeded 3 mm using the manual and algorithm-based methods were 18.8%/7.3% and 0%/0%, respectively. Manual registration resulted in 18.6% of patients with fractions of FRE/GRE exceeding 5 mm. The patients with larger clip deviation had significantly more fractions showing large FRE/GRE using manual registration. Conclusions: For image-registration using fiducial markers in APBI, the manual registration results in more fractions with considerable registration error due to loss of fiducial objectivity resulting from their deviation. The authors recommend the PRBR algorithm as a safe and effective strategy for accurate, image-guided registration and PTV margin reduction.

  19. 3D World Building System

    ScienceCinema

    None

    2016-07-12

    This video provides an overview of the Sandia National Laboratories developed 3-D World Model Building capability that provides users with an immersive, texture rich 3-D model of their environment in minutes using a laptop and color and depth camera.

  20. 3D Buckligami: Digital Matter

    NASA Astrophysics Data System (ADS)

    van Hecke, Martin; de Reus, Koen; Florijn, Bastiaan; Coulais, Corentin

    2014-03-01

    We present a class of elastic structures which exhibit collective buckling in 3D, and create these by a 3D printing/moulding technique. Our structures consist of cubic lattice of anisotropic unit cells, and we show that their mechanical properties are programmable via the orientation of these unit cells.

  1. 3D World Building System

    SciTech Connect

    2013-10-30

    This video provides an overview of the Sandia National Laboratories developed 3-D World Model Building capability that provides users with an immersive, texture rich 3-D model of their environment in minutes using a laptop and color and depth camera.

  2. LLNL-Earth3D

    SciTech Connect

    2013-10-01

    Earth3D is a computer code designed to allow fast calculation of seismic rays and travel times through a 3D model of the Earth. LLNL is using this for earthquake location and global tomography efforts and such codes are of great interest to the Earth Science community.

  3. Market study: 3-D eyetracker

    NASA Technical Reports Server (NTRS)

    1977-01-01

    A market study of a proposed version of a 3-D eyetracker for initial use at NASA's Ames Research Center was made. The commercialization potential of a simplified, less expensive 3-D eyetracker was ascertained. Primary focus on present and potential users of eyetrackers, as well as present and potential manufacturers has provided an effective means of analyzing the prospects for commercialization.

  4. 3D culture for cardiac cells.

    PubMed

    Zuppinger, Christian

    2016-07-01

    This review discusses historical milestones, recent developments and challenges in the area of 3D culture models with cardiovascular cell types. Expectations in this area have been raised in recent years, but more relevant in vitro research, more accurate drug testing results, reliable disease models and insights leading to bioartificial organs are expected from the transition to 3D cell culture. However, the construction of organ-like cardiac 3D models currently remains a difficult challenge. The heart consists of highly differentiated cells in an intricate arrangement.Furthermore, electrical “wiring”, a vascular system and multiple cell types act in concert to respond to the rapidly changing demands of the body. Although cardiovascular 3D culture models have been predominantly developed for regenerative medicine in the past, their use in drug screening and for disease models has become more popular recently. Many sophisticated 3D culture models are currently being developed in this dynamic area of life science. This article is part of a Special Issue entitled: Cardiomyocyte Biology: Integration of Developmental and Environmental Cues in the Heart edited by Marcus Schaub and Hughes Abriel.

  5. Euro3D Science Conference

    NASA Astrophysics Data System (ADS)

    Walsh, J. R.

    2004-02-01

    The Euro3D RTN is an EU funded Research Training Network to foster the exploitation of 3D spectroscopy in Europe. 3D spectroscopy is a general term for spectroscopy of an area of the sky and derives its name from its two spatial + one spectral dimensions. There are an increasing number of instruments which use integral field devices to achieve spectroscopy of an area of the sky, either using lens arrays, optical fibres or image slicers, to pack spectra of multiple pixels on the sky (``spaxels'') onto a 2D detector. On account of the large volume of data and the special methods required to reduce and analyse 3D data, there are only a few centres of expertise and these are mostly involved with instrument developments. There is a perceived lack of expertise in 3D spectroscopy spread though the astronomical community and its use in the armoury of the observational astronomer is viewed as being highly specialised. For precisely this reason the Euro3D RTN was proposed to train young researchers in this area and develop user tools to widen the experience with this particular type of data in Europe. The Euro3D RTN is coordinated by Martin M. Roth (Astrophysikalisches Institut Potsdam) and has been running since July 2002. The first Euro3D science conference was held in Cambridge, UK from 22 to 23 May 2003. The main emphasis of the conference was, in keeping with the RTN, to expose the work of the young post-docs who are funded by the RTN. In addition the team members from the eleven European institutes involved in Euro3D also presented instrumental and observational developments. The conference was organized by Andy Bunker and held at the Institute of Astronomy. There were over thirty participants and 26 talks covered the whole range of application of 3D techniques. The science ranged from Galactic planetary nebulae and globular clusters to kinematics of nearby galaxies out to objects at high redshift. Several talks were devoted to reporting recent observations with newly

  6. 3D vision system assessment

    NASA Astrophysics Data System (ADS)

    Pezzaniti, J. Larry; Edmondson, Richard; Vaden, Justin; Hyatt, Bryan; Chenault, David B.; Kingston, David; Geulen, Vanilynmae; Newell, Scott; Pettijohn, Brad

    2009-02-01

    In this paper, we report on the development of a 3D vision system consisting of a flat panel stereoscopic display and auto-converging stereo camera and an assessment of the system's use for robotic driving, manipulation, and surveillance operations. The 3D vision system was integrated onto a Talon Robot and Operator Control Unit (OCU) such that direct comparisons of the performance of a number of test subjects using 2D and 3D vision systems were possible. A number of representative scenarios were developed to determine which tasks benefited most from the added depth perception and to understand when the 3D vision system hindered understanding of the scene. Two tests were conducted at Fort Leonard Wood, MO with noncommissioned officers ranked Staff Sergeant and Sergeant First Class. The scenarios; the test planning, approach and protocols; the data analysis; and the resulting performance assessment of the 3D vision system are reported.

  7. 3D printing in dentistry.

    PubMed

    Dawood, A; Marti Marti, B; Sauret-Jackson, V; Darwood, A

    2015-12-01

    3D printing has been hailed as a disruptive technology which will change manufacturing. Used in aerospace, defence, art and design, 3D printing is becoming a subject of great interest in surgery. The technology has a particular resonance with dentistry, and with advances in 3D imaging and modelling technologies such as cone beam computed tomography and intraoral scanning, and with the relatively long history of the use of CAD CAM technologies in dentistry, it will become of increasing importance. Uses of 3D printing include the production of drill guides for dental implants, the production of physical models for prosthodontics, orthodontics and surgery, the manufacture of dental, craniomaxillofacial and orthopaedic implants, and the fabrication of copings and frameworks for implant and dental restorations. This paper reviews the types of 3D printing technologies available and their various applications in dentistry and in maxillofacial surgery.

  8. PLOT3D user's manual

    NASA Technical Reports Server (NTRS)

    Walatka, Pamela P.; Buning, Pieter G.; Pierce, Larry; Elson, Patricia A.

    1990-01-01

    PLOT3D is a computer graphics program designed to visualize the grids and solutions of computational fluid dynamics. Seventy-four functions are available. Versions are available for many systems. PLOT3D can handle multiple grids with a million or more grid points, and can produce varieties of model renderings, such as wireframe or flat shaded. Output from PLOT3D can be used in animation programs. The first part of this manual is a tutorial that takes the reader, keystroke by keystroke, through a PLOT3D session. The second part of the manual contains reference chapters, including the helpfile, data file formats, advice on changing PLOT3D, and sample command files.

  9. Assessment of Iterative Closest Point Registration Accuracy for Different Phantom Surfaces Captured by an Optical 3D Sensor in Radiotherapy

    PubMed Central

    Walke, Mathias; Gademann, Günther

    2017-01-01

    An optical 3D sensor provides an additional tool for verification of correct patient settlement on a Tomotherapy treatment machine. The patient's position in the actual treatment is compared with the intended position defined in treatment planning. A commercially available optical 3D sensor measures parts of the body surface and estimates the deviation from the desired position without markers. The registration precision of the in-built algorithm and of selected ICP (iterative closest point) algorithms is investigated on surface data of specially designed phantoms captured by the optical 3D sensor for predefined shifts of the treatment table. A rigid body transform is compared with the actual displacement to check registration reliability for predefined limits. The curvature type of investigated phantom bodies has a strong influence on registration result which is more critical for surfaces of low curvature. We investigated the registration accuracy of the optical 3D sensor for the chosen phantoms and compared the results with selected unconstrained ICP algorithms. Safe registration within the clinical limits is only possible for uniquely shaped surface regions, but error metrics based on surface normals improve translational registration. Large registration errors clearly hint at setup deviations, whereas small values do not guarantee correct positioning. PMID:28163773

  10. Development of 3D holographic endoscope

    NASA Astrophysics Data System (ADS)

    Özcan, Meriç; Önal Tayyar, Duygu

    2016-03-01

    Here we present the development of a 3D holographic endoscope with an interferometer built around a commercial rigid endoscope. We consider recording the holograms with coherent and incoherent light separately without compromising the white light imaging capacity of the endoscope. In coherent light based recording, reference wave required for the hologram is obtained in two different ways. First, as in the classical holography, splitting the laser beam before the object illumination, and secondly creating the reference beam from the object beam itself. This second method does not require path-length matching between the object wave and the reference wave, and it allows the usage of short coherence length light sources. For incoherent light based holographic recordings various interferometric configurations are considered. Experimental results on both illumination conditions are presented.

  11. PLOT3D/AMES, APOLLO UNIX VERSION USING GMR3D (WITHOUT TURB3D)

    NASA Technical Reports Server (NTRS)

    Buning, P.

    1994-01-01

    PLOT3D is an interactive graphics program designed to help scientists visualize computational fluid dynamics (CFD) grids and solutions. Today, supercomputers and CFD algorithms can provide scientists with simulations of such highly complex phenomena that obtaining an understanding of the simulations has become a major problem. Tools which help the scientist visualize the simulations can be of tremendous aid. PLOT3D/AMES offers more functions and features, and has been adapted for more types of computers than any other CFD graphics program. Version 3.6b+ is supported for five computers and graphic libraries. Using PLOT3D, CFD physicists can view their computational models from any angle, observing the physics of problems and the quality of solutions. As an aid in designing aircraft, for example, PLOT3D's interactive computer graphics can show vortices, temperature, reverse flow, pressure, and dozens of other characteristics of air flow during flight. As critical areas become obvious, they can easily be studied more closely using a finer grid. PLOT3D is part of a computational fluid dynamics software cycle. First, a program such as 3DGRAPE (ARC-12620) helps the scientist generate computational grids to model an object and its surrounding space. Once the grids have been designed and parameters such as the angle of attack, Mach number, and Reynolds number have been specified, a "flow-solver" program such as INS3D (ARC-11794 or COS-10019) solves the system of equations governing fluid flow, usually on a supercomputer. Grids sometimes have as many as two million points, and the "flow-solver" produces a solution file which contains density, x- y- and z-momentum, and stagnation energy for each grid point. With such a solution file and a grid file containing up to 50 grids as input, PLOT3D can calculate and graphically display any one of 74 functions, including shock waves, surface pressure, velocity vectors, and particle traces. PLOT3D's 74 functions are organized into

  12. PLOT3D/AMES, APOLLO UNIX VERSION USING GMR3D (WITH TURB3D)

    NASA Technical Reports Server (NTRS)

    Buning, P.

    1994-01-01

    PLOT3D is an interactive graphics program designed to help scientists visualize computational fluid dynamics (CFD) grids and solutions. Today, supercomputers and CFD algorithms can provide scientists with simulations of such highly complex phenomena that obtaining an understanding of the simulations has become a major problem. Tools which help the scientist visualize the simulations can be of tremendous aid. PLOT3D/AMES offers more functions and features, and has been adapted for more types of computers than any other CFD graphics program. Version 3.6b+ is supported for five computers and graphic libraries. Using PLOT3D, CFD physicists can view their computational models from any angle, observing the physics of problems and the quality of solutions. As an aid in designing aircraft, for example, PLOT3D's interactive computer graphics can show vortices, temperature, reverse flow, pressure, and dozens of other characteristics of air flow during flight. As critical areas become obvious, they can easily be studied more closely using a finer grid. PLOT3D is part of a computational fluid dynamics software cycle. First, a program such as 3DGRAPE (ARC-12620) helps the scientist generate computational grids to model an object and its surrounding space. Once the grids have been designed and parameters such as the angle of attack, Mach number, and Reynolds number have been specified, a "flow-solver" program such as INS3D (ARC-11794 or COS-10019) solves the system of equations governing fluid flow, usually on a supercomputer. Grids sometimes have as many as two million points, and the "flow-solver" produces a solution file which contains density, x- y- and z-momentum, and stagnation energy for each grid point. With such a solution file and a grid file containing up to 50 grids as input, PLOT3D can calculate and graphically display any one of 74 functions, including shock waves, surface pressure, velocity vectors, and particle traces. PLOT3D's 74 functions are organized into

  13. 3D Visualization of Cooperative Trajectories

    NASA Technical Reports Server (NTRS)

    Schaefer, John A.

    2014-01-01

    Aerodynamicists and biologists have long recognized the benefits of formation flight. When birds or aircraft fly in the upwash region of the vortex generated by leaders in a formation, induced drag is reduced for the trail bird or aircraft, and efficiency improves. The major consequence of this is that fuel consumption can be greatly reduced. When two aircraft are separated by a large enough longitudinal distance, the aircraft are said to be flying in a cooperative trajectory. A simulation has been developed to model autonomous cooperative trajectories of aircraft; however it does not provide any 3D representation of the multi-body system dynamics. The topic of this research is the development of an accurate visualization of the multi-body system observable in a 3D environment. This visualization includes two aircraft (lead and trail), a landscape for a static reference, and simplified models of the vortex dynamics and trajectories at several locations between the aircraft.

  14. Fabricating 3D figurines with personalized faces.

    PubMed

    Tena, J Rafael; Mahler, Moshe; Beeler, Thabo; Grosse, Max; Hengchin Yeh; Matthews, Iain

    2013-01-01

    We present a semi-automated system for fabricating figurines with faces that are personalised to the individual likeness of the customer. The efficacy of the system has been demonstrated by commercial deployments at Walt Disney World Resort and Star Wars Celebration VI in Orlando Florida. Although the system is semi automated, human intervention is limited to a few simple tasks to maintain the high throughput and consistent quality required for commercial application. In contrast to existing systems that fabricate custom heads that are assembled to pre-fabricated plastic bodies, our system seamlessly integrates 3D facial data with a predefined figurine body into a unique and continuous object that is fabricated as a single piece. The combination of state-of-the-art 3D capture, modelling, and printing that are the core of our system provide the flexibility to fabricate figurines whose complexity is only limited by the creativity of the designer.

  15. A review of a method for dynamic load distribution, dynamic modeling, and explicit internal force control when two serial link manipulators mutually lift and transport a rigid body object

    SciTech Connect

    Unseren, M.A.

    1997-09-01

    The report reviews a method for modeling and controlling two serial link manipulators which mutually lift and transport a rigid body object in a three dimensional workspace. A new vector variable is introduced which parameterizes the internal contact force controlled degrees of freedom. A technique for dynamically distributing the payload between the manipulators is suggested which yields a family of solutions for the contact forces and torques the manipulators impart to the object. A set of rigid body kinematic constraints which restricts the values of the joint velocities of both manipulators is derived. A rigid body dynamical model for the closed chain system is first developed in the joint space. The model is obtained by generalizing the previous methods for deriving the model. The joint velocity and acceleration variables in the model are expressed in terms of independent pseudovariables. The pseudospace model is transformed to obtain reduced order equations of motion and a separate set of equations governing the internal components of the contact forces and torques. A theoretic control architecture is suggested which explicitly decouples the two sets of equations comprising the model. The controller enables the designer to develop independent, non-interacting control laws for the position control and internal force control of the system.

  16. Unassisted 3D camera calibration

    NASA Astrophysics Data System (ADS)

    Atanassov, Kalin; Ramachandra, Vikas; Nash, James; Goma, Sergio R.

    2012-03-01

    With the rapid growth of 3D technology, 3D image capture has become a critical part of the 3D feature set on mobile phones. 3D image quality is affected by the scene geometry as well as on-the-device processing. An automatic 3D system usually assumes known camera poses accomplished by factory calibration using a special chart. In real life settings, pose parameters estimated by factory calibration can be negatively impacted by movements of the lens barrel due to shaking, focusing, or camera drop. If any of these factors displaces the optical axes of either or both cameras, vertical disparity might exceed the maximum tolerable margin and the 3D user may experience eye strain or headaches. To make 3D capture more practical, one needs to consider unassisted (on arbitrary scenes) calibration. In this paper, we propose an algorithm that relies on detection and matching of keypoints between left and right images. Frames containing erroneous matches, along with frames with insufficiently rich keypoint constellations, are detected and discarded. Roll, pitch yaw , and scale differences between left and right frames are then estimated. The algorithm performance is evaluated in terms of the remaining vertical disparity as compared to the maximum tolerable vertical disparity.

  17. MRCK_3D contact detonation algorithm

    SciTech Connect

    Rougier, Esteban; Munjiza, Antonio

    2010-01-01

    Large-scale Combined Finite-Discrete Element Methods (FEM-DEM) and Discrete Element Methods (DEM) simulations involving contact of a large number of separate bod ies need an efficient, robust and flexible contact detection algorithm. In this work the MRCK-3D search algorithm is outlined and its main CPU perfonnances are evaluated. One of the most important aspects of this newly developed search algorithm is that it is applicable to systems consisting of many bodies of different shapes and sizes.

  18. 3D Scan Systems Integration

    DTIC Science & Technology

    2007-11-02

    AGENCY USE ONLY (Leave Blank) 2. REPORT DATE 5 Feb 98 4. TITLE AND SUBTITLE 3D Scan Systems Integration REPORT TYPE AND DATES COVERED...2-89) Prescribed by ANSI Std. Z39-1 298-102 [ EDO QUALITY W3PECTEDI DLA-ARN Final Report for US Defense Logistics Agency on DDFG-T2/P3: 3D...SCAN SYSTEMS INTEGRATION Contract Number SPO100-95-D-1014 Contractor Ohio University Delivery Order # 0001 Delivery Order Title 3D Scan Systems

  19. A 3D surface imaging system for assessing human obesity

    NASA Astrophysics Data System (ADS)

    Xu, B.; Yu, W.; Yao, M.; Yao, X.; Li, Q.; Pepper, M. R.; Freeland-Graves, J. H.

    2009-08-01

    The increasing prevalence of obesity suggests a need to develop a convenient, reliable and economical tool for assessment of this condition. Three-dimensional (3D) body surface imaging has emerged as an exciting technology for estimation of body composition. This paper presents a new 3D body imaging system, which was designed for enhanced portability, affordability, and functionality. In this system, stereo vision technology was used to satisfy the requirements for a simple hardware setup and fast image acquisitions. The portability of the system was created via a two-stand configuration, and the accuracy of body volume measurements was improved by customizing stereo matching and surface reconstruction algorithms that target specific problems in 3D body imaging. Body measurement functions dedicated to body composition assessment also were developed. The overall performance of the system was evaluated in human subjects by comparison to other conventional anthropometric methods, as well as air displacement plethysmography, for body fat assessment.

  20. 3D polymer scaffold arrays.

    PubMed

    Simon, Carl G; Yang, Yanyin; Dorsey, Shauna M; Ramalingam, Murugan; Chatterjee, Kaushik

    2011-01-01

    We have developed a combinatorial platform for fabricating tissue scaffold arrays that can be used for screening cell-material interactions. Traditional research involves preparing samples one at a time for characterization and testing. Combinatorial and high-throughput (CHT) methods lower the cost of research by reducing the amount of time and material required for experiments by combining many samples into miniaturized specimens. In order to help accelerate biomaterials research, many new CHT methods have been developed for screening cell-material interactions where materials are presented to cells as a 2D film or surface. However, biomaterials are frequently used to fabricate 3D scaffolds, cells exist in vivo in a 3D environment and cells cultured in a 3D environment in vitro typically behave more physiologically than those cultured on a 2D surface. Thus, we have developed a platform for fabricating tissue scaffold libraries where biomaterials can be presented to cells in a 3D format.

  1. Autofocus for 3D imaging

    NASA Astrophysics Data System (ADS)

    Lee-Elkin, Forest

    2008-04-01

    Three dimensional (3D) autofocus remains a significant challenge for the development of practical 3D multipass radar imaging. The current 2D radar autofocus methods are not readily extendable across sensor passes. We propose a general framework that allows a class of data adaptive solutions for 3D auto-focus across passes with minimal constraints on the scene contents. The key enabling assumption is that portions of the scene are sparse in elevation which reduces the number of free variables and results in a system that is simultaneously solved for scatterer heights and autofocus parameters. The proposed method extends 2-pass interferometric synthetic aperture radar (IFSAR) methods to an arbitrary number of passes allowing the consideration of scattering from multiple height locations. A specific case from the proposed autofocus framework is solved and demonstrates autofocus and coherent multipass 3D estimation across the 8 passes of the "Gotcha Volumetric SAR Data Set" X-Band radar data.

  2. Combinatorial 3D Mechanical Metamaterials

    NASA Astrophysics Data System (ADS)

    Coulais, Corentin; Teomy, Eial; de Reus, Koen; Shokef, Yair; van Hecke, Martin

    2015-03-01

    We present a class of elastic structures which exhibit 3D-folding motion. Our structures consist of cubic lattices of anisotropic unit cells that can be tiled in a complex combinatorial fashion. We design and 3d-print this complex ordered mechanism, in which we combine elastic hinges and defects to tailor the mechanics of the material. Finally, we use this large design space to encode smart functionalities such as surface patterning and multistability.

  3. Vehicle Surveillance with a Generic, Adaptive, 3D Vehicle Model.

    PubMed

    Leotta, Matthew J; Mundy, Joseph L

    2011-07-01

    In automated surveillance, one is often interested in tracking road vehicles, measuring their shape in 3D world space, and determining vehicle classification. To address these tasks simultaneously, an effective approach is the constrained alignment of a prior model of 3D vehicle shape to images. Previous 3D vehicle models are either generic but overly simple or rigid and overly complex. Rigid models represent exactly one vehicle design, so a large collection is needed. A single generic model can deform to a wide variety of shapes, but those shapes have been far too primitive. This paper uses a generic 3D vehicle model that deforms to match a wide variety of passenger vehicles. It is adjustable in complexity between the two extremes. The model is aligned to images by predicting and matching image intensity edges. Novel algorithms are presented for fitting models to multiple still images and simultaneous tracking while estimating shape in video. Experiments compare the proposed model to simple generic models in accuracy and reliability of 3D shape recovery from images and tracking in video. Standard techniques for classification are also used to compare the models. The proposed model outperforms the existing simple models at each task.

  4. Combination of 3-D deformation and shape measurement by electronic speckle pattern interferometry for quantitative strain-stress analysis

    NASA Astrophysics Data System (ADS)

    Ettemeyer, Andreas

    2000-01-01

    Laser speckle interferometry as a full-field noncontact measuring technique offers interesting opportunities for strain-stress analysis on components. While its application in material testing and material research has already achieved some acceptance in research and industry, its application to complex industrial components like car bodies, gear boxes, engines, and suspensions has been limited. Basic difficulties have arisen from the relatively large rigid-body movements of components under test, harsh environmental conditions in the real test world, and the often complex shape of the analyzed component, especially in the most interesting areas. The commercial availability of a radically miniaturized 3D speckle interferometer has led to the new laser-optical measuring device, the MicroStarTM, which can be used for quantitative strain-stress measurement on nearly any industrial component. The device uses 3D speckle interferometry to measure the shape and the 3D deformation in the area of interest. The combination of shape and deformation provides all necessary data for quantitative 3D strain analysis. The principle stresses as well as the bending and tensile components of the strains can be easily determined. In this paper, the principle and applications of this new system are presented.

  5. Using 3-D OFEM for movement correction and quantitative evaluation in dynamic cardiac NH3 PET images

    NASA Astrophysics Data System (ADS)

    Lin, Hong-Dun; Yang, Bang-Hung; Chen, Chih-Hao; Wu, Liang-Chih; Liu, Ren-Shyan; Chung, Being-Tau; Lin, Kang-Ping

    2005-04-01

    Various forms of cardiac pathology, such as myocardial ischemia and infarction, can be characterized with 13NH3-PET images. In clinical situation, polar map (bullseye image), which derived by combining images from multiple planes (designated by the circle around the myocardium in the above images), so that information of the entire myocardium can be displayed in a single image for diagnosis. However, image artifact problem always arises from body movement or breathing motion in image acquisition period and results in indefinite myocardium disorder region shown in bullseye image. In this study, a 3-D motion and movement correction method is developed to solve the image artifact problem to improve the accuracy of diagnostic bullseye image. The proposed method is based on 3-D optical flow estimation method (OFEM) and cooperates with the particular dynamic imaging protocol, which snaps serial PET images (5 frames) in later half imaging period. The 3-D OFEM assigns to each image point in the visual 3-D flow velocity field, which associates with the non-rigid motion of the time-varying brightness of a sequence of images. It presents vectors of corresponding images position between frames for motion correction. To validate the performance of proposed method, 10 normal and 20 abnormal whole-body dynamic PET imaging studies were applied, and the results show that the bullseye images, which generated by corrected images, present clear and definite tissue region for clinical diagnosis.

  6. Flexible Piezoresistive Sensors Embedded in 3D Printed Tires

    PubMed Central

    Emon, Md Omar Faruk; Choi, Jae-Won

    2017-01-01

    In this article, we report the development of a flexible, 3D printable piezoresistive pressure sensor capable of measuring force and detecting the location of the force. The multilayer sensor comprises of an ionic liquid-based piezoresistive intermediate layer in between carbon nanotube (CNT)-based stretchable electrodes. A sensor containing an array of different sensing units was embedded on the inner liner surface of a 3D printed tire to provide with force information at different points of contact between the tire and road. Four scaled tires, as well as wheels, were 3D printed using a flexible and a rigid material, respectively, which were later assembled with a 3D-printed chassis. Only one tire was equipped with a sensor and the chassis was driven through a motorized linear stage at different speeds and load conditions to evaluate the sensor performance. The sensor was fabricated via molding and screen printing processes using a commercially available 3D-printable photopolymer as 3D printing is our target manufacturing technique to fabricate the entire tire assembly with the sensor. Results show that the proposed sensors, inserted in the 3D printed tire assembly, could detect forces, as well as their locations, properly. PMID:28327533

  7. Flexible Piezoresistive Sensors Embedded in 3D Printed Tires.

    PubMed

    Emon, Md Omar Faruk; Choi, Jae-Won

    2017-03-22

    In this article, we report the development of a flexible, 3D printable piezoresistive pressure sensor capable of measuring force and detecting the location of the force. The multilayer sensor comprises of an ionic liquid-based piezoresistive intermediate layer in between carbon nanotube (CNT)-based stretchable electrodes. A sensor containing an array of different sensing units was embedded on the inner liner surface of a 3D printed tire to provide with force information at different points of contact between the tire and road. Four scaled tires, as well as wheels, were 3D printed using a flexible and a rigid material, respectively, which were later assembled with a 3D-printed chassis. Only one tire was equipped with a sensor and the chassis was driven through a motorized linear stage at different speeds and load conditions to evaluate the sensor performance. The sensor was fabricated via molding and screen printing processes using a commercially available 3D-printable photopolymer as 3D printing is our target manufacturing technique to fabricate the entire tire assembly with the sensor. Results show that the proposed sensors, inserted in the 3D printed tire assembly, could detect forces, as well as their locations, properly.

  8. YouDash3D: exploring stereoscopic 3D gaming for 3D movie theaters

    NASA Astrophysics Data System (ADS)

    Schild, Jonas; Seele, Sven; Masuch, Maic

    2012-03-01

    Along with the success of the digitally revived stereoscopic cinema, events beyond 3D movies become attractive for movie theater operators, i.e. interactive 3D games. In this paper, we present a case that explores possible challenges and solutions for interactive 3D games to be played by a movie theater audience. We analyze the setting and showcase current issues related to lighting and interaction. Our second focus is to provide gameplay mechanics that make special use of stereoscopy, especially depth-based game design. Based on these results, we present YouDash3D, a game prototype that explores public stereoscopic gameplay in a reduced kiosk setup. It features live 3D HD video stream of a professional stereo camera rig rendered in a real-time game scene. We use the effect to place the stereoscopic effigies of players into the digital game. The game showcases how stereoscopic vision can provide for a novel depth-based game mechanic. Projected trigger zones and distributed clusters of the audience video allow for easy adaptation to larger audiences and 3D movie theater gaming.

  9. Speaking Volumes About 3-D

    NASA Technical Reports Server (NTRS)

    2002-01-01

    In 1999, Genex submitted a proposal to Stennis Space Center for a volumetric 3-D display technique that would provide multiple users with a 360-degree perspective to simultaneously view and analyze 3-D data. The futuristic capabilities of the VolumeViewer(R) have offered tremendous benefits to commercial users in the fields of medicine and surgery, air traffic control, pilot training and education, computer-aided design/computer-aided manufacturing, and military/battlefield management. The technology has also helped NASA to better analyze and assess the various data collected by its satellite and spacecraft sensors. Genex capitalized on its success with Stennis by introducing two separate products to the commercial market that incorporate key elements of the 3-D display technology designed under an SBIR contract. The company Rainbow 3D(R) imaging camera is a novel, three-dimensional surface profile measurement system that can obtain a full-frame 3-D image in less than 1 second. The third product is the 360-degree OmniEye(R) video system. Ideal for intrusion detection, surveillance, and situation management, this unique camera system offers a continuous, panoramic view of a scene in real time.

  10. 3D/3D registration of coronary CTA and biplane XA reconstructions for improved image guidance

    SciTech Connect

    Dibildox, Gerardo Baka, Nora; Walsum, Theo van; Punt, Mark; Aben, Jean-Paul; Schultz, Carl; Niessen, Wiro

    2014-09-15

    Purpose: The authors aim to improve image guidance during percutaneous coronary interventions of chronic total occlusions (CTO) by providing information obtained from computed tomography angiography (CTA) to the cardiac interventionist. To this end, the authors investigate a method to register a 3D CTA model to biplane reconstructions. Methods: The authors developed a method for registering preoperative coronary CTA with intraoperative biplane x-ray angiography (XA) images via 3D models of the coronary arteries. The models are extracted from the CTA and biplane XA images, and are temporally aligned based on CTA reconstruction phase and XA ECG signals. Rigid spatial alignment is achieved with a robust probabilistic point set registration approach using Gaussian mixture models (GMMs). This approach is extended by including orientation in the Gaussian mixtures and by weighting bifurcation points. The method is evaluated on retrospectively acquired coronary CTA datasets of 23 CTO patients for which biplane XA images are available. Results: The Gaussian mixture model approach achieved a median registration accuracy of 1.7 mm. The extended GMM approach including orientation was not significantly different (P > 0.1) but did improve robustness with regards to the initialization of the 3D models. Conclusions: The authors demonstrated that the GMM approach can effectively be applied to register CTA to biplane XA images for the purpose of improving image guidance in percutaneous coronary interventions.

  11. The BGY3dM model for the approximation of solvent densities.

    PubMed

    Griebel, Michael; Jager, Lukas

    2008-11-07

    We present a new approach for the approximation of solvent densities around solutes of arbitrary shape. Our model represents a three-dimensional (3d) Born-Green-Yvon (BGY) equation for an arbitrary solute immersed into a molecular (M) solvent, the BGY3dM model. It comprises the famous Kirkwood approximation as closure relation. The molecules of the solvent are modeled as rigid bodies by taking the limit of an infinite restoring force for the intramolecular interactions. Furthermore, short-range potentials as well as the long-range Coulomb interaction are taken into account. The resulting integro-differential equations are efficiently solved by a Picard iteration and a solution of the linearized equations using Fourier transformations. We compare the results obtained from the presented BGY3dM method with results obtained by extensive molecular dynamics simulations for a HCl-like model solvent. Furthermore, we apply the method to carbon disulfide as solvent. The overall performance of the method is promising.

  12. Robust 3D Position Estimation in Wide and Unconstrained Indoor Environments

    PubMed Central

    Mossel, Annette

    2015-01-01

    In this paper, a system for 3D position estimation in wide, unconstrained indoor environments is presented that employs infrared optical outside-in tracking of rigid-body targets with a stereo camera rig. To overcome limitations of state-of-the-art optical tracking systems, a pipeline for robust target identification and 3D point reconstruction has been investigated that enables camera calibration and tracking in environments with poor illumination, static and moving ambient light sources, occlusions and harsh conditions, such as fog. For evaluation, the system has been successfully applied in three different wide and unconstrained indoor environments, (1) user tracking for virtual and augmented reality applications, (2) handheld target tracking for tunneling and (3) machine guidance for mining. The results of each use case are discussed to embed the presented approach into a larger technological and application context. The experimental results demonstrate the system’s capabilities to track targets up to 100 m. Comparing the proposed approach to prior art in optical tracking in terms of range coverage and accuracy, it significantly extends the available tracking range, while only requiring two cameras and providing a relative 3D point accuracy with sub-centimeter deviation up to 30 m and low-centimeter deviation up to 100 m. PMID:26694388

  13. Nucleus and nucleus-cytoskeleton connections in 3D cell migration.

    PubMed

    Liu, Lingling; Luo, Qing; Sun, Jinghui; Song, Guanbin

    2016-10-15

    Cell migration plays an important role in many physiological and pathological settings, ranging from embryonic development to cancer metastasis. Currently, accumulating data suggest that cells migrating in three-dimensional (3D) environments show well-defined differences compared to their well-established two-dimensional (2D) counterparts. During 3D migration, the cell body and nucleus must deform to allow cellular passage through the available spaces, and the deformability of the relatively rigid nucleus may constitute a limiting step. Here, we highlight the key evidence regarding the role of the nuclear mechanics in 3D migration, including the molecular components that govern the stiffness of the nucleus and review how the nuclear dynamics are connected to and controlled by cytoskeleton-based migration machinery. Intriguingly, nuclear movement must be coordinated with the cytoskeletal dynamics at the leading and trailing edges, which in turn impact the cytoplasmic dynamics that affect the migration efficiency. Thus, we suggest that alterations in the nuclear structure may facilitate cellular reorganizations that are necessary for efficient migration.

  14. Statistical and neural network classifiers in model-based 3-D object recognition

    NASA Astrophysics Data System (ADS)

    Newton, Scott C.; Nutter, Brian S.; Mitra, Sunanda

    1991-02-01

    For autonomous machines equipped with vision capabilities and in a controlled environment 3-D model-based object identification methodologies will in general solve rigid body recognition problems. In an uncontrolled environment however several factors pose difficulties for correct identification. We have addressed the problem of 3-D object recognition using a number of methods including neural network classifiers and a Bayesian-like classifier for matching image data with model projection-derived data [1 21. Neural network classifiers used began operation as simple feature vector classifiers. However unmodelled signal behavior was learned with additional samples yielding great improvement in classification rates. The model analysis drastically shortened training time of both classification systems. In an environment where signal behavior is not accurately modelled two separate forms of learning give the systems the ability to update estimates of this behavior. Required of course are sufficient samples to learn this new information. Given sufficient information and a well-controlled environment identification of 3-D objects from a limited number of classes is indeed possible. 1.

  15. DYNA3D, INGRID, and TAURUS: an integrated, interactive software system for crashworthiness engineering

    SciTech Connect

    Benson, D.J.; Hallquist, J.O.; Stillman, D.W.

    1985-04-01

    Crashworthiness engineering has always been a high priority at Lawrence Livermore National Laboratory because of its role in the safe transport of radioactive material for the nuclear power industry and military. As a result, the authors have developed an integrated, interactive set of finite element programs for crashworthiness analysis. The heart of the system is DYNA3D, an explicit, fully vectorized, large deformation structural dynamics code. DYNA3D has the following four capabilities that are critical for the efficient and accurate analysis of crashes: (1) fully nonlinear solid, shell, and beam elements for representing a structure, (2) a broad range of constitutive models for representing the materials, (3) sophisticated contact algorithms for the impact interactions, and (4) a rigid body capability to represent the bodies away from the impact zones at a greatly reduced cost without sacrificing any accuracy in the momentum calculations. To generate the large and complex data files for DYNA3D, INGRID, a general purpose mesh generator, is used. It runs on everything from IBM PCs to CRAYS, and can generate 1000 nodes/minute on a PC. With its efficient hidden line algorithms and many options for specifying geometry, INGRID also doubles as a geometric modeller. TAURUS, an interactive post processor, is used to display DYNA3D output. In addition to the standard monochrome hidden line display, time history plotting, and contouring, TAURUS generates interactive color displays on 8 color video screens by plotting color bands superimposed on the mesh which indicate the value of the state variables. For higher quality color output, graphic output files may be sent to the DICOMED film recorders. We have found that color is every bit as important as hidden line removal in aiding the analyst in understanding his results. In this paper the basic methodologies of the programs are presented along with several crashworthiness calculations.

  16. Practical pseudo-3D registration for large tomographic images

    NASA Astrophysics Data System (ADS)

    Liu, Xuan; Laperre, Kjell; Sasov, Alexander

    2014-09-01

    Image registration is a powerful tool in various tomographic applications. Our main focus is on microCT applications in which samples/animals can be scanned multiple times under different conditions or at different time points. For this purpose, a registration tool capable of handling fairly large volumes has been developed, using a novel pseudo-3D method to achieve fast and interactive registration with simultaneous 3D visualization. To reduce computation complexity in 3D registration, we decompose it into several 2D registrations, which are applied to the orthogonal views (transaxial, sagittal and coronal) sequentially and iteratively. After registration in each view, the next view is retrieved with the new transformation matrix for registration. This reduces the computation complexity significantly. For rigid transform, we only need to search for 3 parameters (2 shifts, 1 rotation) in each of the 3 orthogonal views instead of 6 (3 shifts, 3 rotations) for full 3D volume. In addition, the amount of voxels involved is also significantly reduced. For the proposed pseudo-3D method, image-based registration is employed, with Sum of Square Difference (SSD) as the similarity measure. The searching engine is Powell's conjugate direction method. In this paper, only rigid transform is used. However, it can be extended to affine transform by adding scaling and possibly shearing to the transform model. We have noticed that more information can be used in the 2D registration if Maximum Intensity Projections (MIP) or Parallel Projections (PP) is used instead of the orthogonal views. Also, other similarity measures, such as covariance or mutual information, can be easily incorporated. The initial evaluation on microCT data shows very promising results. Two application examples are shown: dental samples before and after treatment and structural changes in materials before and after compression. Evaluation on registration accuracy between pseudo-3D method and true 3D method has

  17. Elastic image registration via rigid object motion induced deformation

    NASA Astrophysics Data System (ADS)

    Zheng, Xiaofen; Udupa, Jayaram K.; Hirsch, Bruce E.

    2011-03-01

    In this paper, we estimate the deformations induced on soft tissues by the rigid independent movements of hard objects and create an admixture of rigid and elastic adaptive image registration transformations. By automatically segmenting and independently estimating the movement of rigid objects in 3D images, we can maintain rigidity in bones and hard tissues while appropriately deforming soft tissues. We tested our algorithms on 20 pairs of 3D MRI datasets pertaining to a kinematic study of the flexibility of the ankle complex of normal feet as well as ankles affected by abnormalities in foot architecture and ligament injuries. The results show that elastic image registration via rigid object-induced deformation outperforms purely rigid and purely nonrigid approaches.

  18. Macrophage podosomes go 3D.

    PubMed

    Van Goethem, Emeline; Guiet, Romain; Balor, Stéphanie; Charrière, Guillaume M; Poincloux, Renaud; Labrousse, Arnaud; Maridonneau-Parini, Isabelle; Le Cabec, Véronique

    2011-01-01

    Macrophage tissue infiltration is a critical step in the immune response against microorganisms and is also associated with disease progression in chronic inflammation and cancer. Macrophages are constitutively equipped with specialized structures called podosomes dedicated to extracellular matrix (ECM) degradation. We recently reported that these structures play a critical role in trans-matrix mesenchymal migration mode, a protease-dependent mechanism. Podosome molecular components and their ECM-degrading activity have been extensively studied in two dimensions (2D), but yet very little is known about their fate in three-dimensional (3D) environments. Therefore, localization of podosome markers and proteolytic activity were carefully examined in human macrophages performing mesenchymal migration. Using our gelled collagen I 3D matrix model to obligate human macrophages to perform mesenchymal migration, classical podosome markers including talin, paxillin, vinculin, gelsolin, cortactin were found to accumulate at the tip of F-actin-rich cell protrusions together with β1 integrin and CD44 but not β2 integrin. Macrophage proteolytic activity was observed at podosome-like protrusion sites using confocal fluorescence microscopy and electron microscopy. The formation of migration tunnels by macrophages inside the matrix was accomplished by degradation, engulfment and mechanic compaction of the matrix. In addition, videomicroscopy revealed that 3D F-actin-rich protrusions of migrating macrophages were as dynamic as their 2D counterparts. Overall, the specifications of 3D podosomes resembled those of 2D podosome rosettes rather than those of individual podosomes. This observation was further supported by the aspect of 3D podosomes in fibroblasts expressing Hck, a master regulator of podosome rosettes in macrophages. In conclusion, human macrophage podosomes go 3D and take the shape of spherical podosome rosettes when the cells perform mesenchymal migration. This work

  19. Parallel CARLOS-3D code development

    SciTech Connect

    Putnam, J.M.; Kotulski, J.D.

    1996-02-01

    CARLOS-3D is a three-dimensional scattering code which was developed under the sponsorship of the Electromagnetic Code Consortium, and is currently used by over 80 aerospace companies and government agencies. The code has been extensively validated and runs on both serial workstations and parallel super computers such as the Intel Paragon. CARLOS-3D is a three-dimensional surface integral equation scattering code based on a Galerkin method of moments formulation employing Rao- Wilton-Glisson roof-top basis for triangular faceted surfaces. Fully arbitrary 3D geometries composed of multiple conducting and homogeneous bulk dielectric materials can be modeled. This presentation describes some of the extensions to the CARLOS-3D code, and how the operator structure of the code facilitated these improvements. Body of revolution (BOR) and two-dimensional geometries were incorporated by simply including new input routines, and the appropriate Galerkin matrix operator routines. Some additional modifications were required in the combined field integral equation matrix generation routine due to the symmetric nature of the BOR and 2D operators. Quadrilateral patched surfaces with linear roof-top basis functions were also implemented in the same manner. Quadrilateral facets and triangular facets can be used in combination to more efficiently model geometries with both large smooth surfaces and surfaces with fine detail such as gaps and cracks. Since the parallel implementation in CARLOS-3D is at high level, these changes were independent of the computer platform being used. This approach minimizes code maintenance, while providing capabilities with little additional effort. Results are presented showing the performance and accuracy of the code for some large scattering problems. Comparisons between triangular faceted and quadrilateral faceted geometry representations will be shown for some complex scatterers.

  20. Manifold Learning for 3D Shape Description and Classification

    DTIC Science & Technology

    2014-06-09

    combat. Recently finished US Army Anthropometric Survey (ANSUR II) has collected 3D body scan data of soldiers at the Natick Solider Center (NSC), as...sizing of virtually every piece of clothing and equipment that Soldiers wear and use in combat. Recently finished US Army Anthropometric Survey (ANSUR... Anthropometric Survey (ANSUR II) has collected 3D body scan data of soldiers at the Natick Solider Center (NSC), as shown in Figure 1. By applying new

  1. Unbiased rigid registration using transfer functions

    NASA Astrophysics Data System (ADS)

    Hahn, Dieter A.; Hornegger, Joachim; Bautz, Werner; Kuwert, Torsten; Roemer, Wolfgang

    2005-04-01

    The evaluation of tumor growth as regression under therapy is an important clinical issue. Rigid registration of sequentially acquired 3D-images has proven its value for this purpose. Existing approaches to rigid image registration use the whole volume for the estimation of the rigid transform. Non-rigid soft tissue deformation, however, will imply a bias to the registration result, because local deformations cannot be modeled by rigid transforms. Anatomical substructures, like bones or teeth, are not affected by these deformations, but follow a rigid transform. This important observation is incorporated in the proposed registration algorithm. The selection of anatomical substructure is done by manual interaction of medical experts adjusting the transfer function of the volume rendering software. The parameters of the transfer function are used to identify the voxels that are considered for registration. A rigid transform is estimated by a quaternion gradient descent algorithm based on the intensity values of the specified tissue classes. Commonly used voxel intensity measures are adjusted to the modified registration algorithm. The contribution describes the mathematical framework of the proposed registration method and its implementation in a commercial software package. The experimental evaluation includes the discussion of different similarity measures, the comparison of the proposed method to established rigid registration techniques and the evaluation of the efficiency of the new method. We conclude with the discussion of potential medical applications of the proposed registration algorithm.

  2. Petal, terrain & airbags - 3D

    NASA Technical Reports Server (NTRS)

    1997-01-01

    Portions of the lander's deflated airbags and a petal are at the lower area of this image, taken in stereo by the Imager for Mars Pathfinder (IMP) on Sol 3. 3D glasses are necessary to identify surface detail. The metallic object at lower right is part of the lander's low-gain antenna. This image is part of a 3D 'monster

    Click below to see the left and right views individually. [figure removed for brevity, see original site] Left [figure removed for brevity, see original site] Right

  3. 3D Computations and Experiments

    SciTech Connect

    Couch, R; Faux, D; Goto, D; Nikkel, D

    2004-04-05

    This project consists of two activities. Task A, Simulations and Measurements, combines all the material model development and associated numerical work with the materials-oriented experimental activities. The goal of this effort is to provide an improved understanding of dynamic material properties and to provide accurate numerical representations of those properties for use in analysis codes. Task B, ALE3D Development, involves general development activities in the ALE3D code with the focus of improving simulation capabilities for problems of mutual interest to DoD and DOE. Emphasis is on problems involving multi-phase flow, blast loading of structures and system safety/vulnerability studies.

  4. Predicting Protein Hinge Motions and Allostery Using Rigidity Theory

    NASA Astrophysics Data System (ADS)

    Sljoka, Adnan; Bezginov, Alexandr

    2011-11-01

    Understanding how a 3D structure of a protein functions depends on predicting which regions are rigid, and which are flexible. One recent approach models molecules as a structure of fixed units (atoms with their bond angles as rigid units, bonds as hinges) plus biochemical constraints coming from the local geometry. This generates a `molecular graph' in the theory of combinatorial rigidity. The 6|V|-6 counting condition for 3-dimensional body-hinge structures (modulo molecular theorem), and a fast `pebble game' algorithm which tracks this count in the multigraph, have led to the development of the program FIRST, for rapid predictions of the flexibility of proteins. In this study we develop a novel protein hinge prediction algorithm via our extension of the pebble game algorithm (relevant regions detection algorithm). We have tested our hinge prediction algorithm on several proteins chosen from the dataset of manually annotated hinges available on the MOLMOV server. Many of our predictions are in very good agreement with this data set. Our algorithms can also predict `allosteric' interactions in proteins—where binding on one site of a molecule changes the shape or binding at a distance `active site' of the molecule. We also give some promising results which support the sliding piston-like movement of helices with respect to one another as a plausible mechanism by which GCPR receptors propagate conformational changes across membranes.

  5. Exact free vibration analysis for mechanical system composed of Timoshenko beams with intermediate eccentric rigid body on elastic supports: An experimental and analytical investigation

    NASA Astrophysics Data System (ADS)

    Farghaly, S. H.; El-Sayed, T. A.

    2017-01-01

    The purpose of this article is to investigate the changes in the magnitude of natural frequencies and their associated modal shapes of Timoshenko beam with respect to different system design parameters. This beam includes an intermediate extended eccentric rigid mass mounted on two elastic segments. The equilibrium equations which govern the transverse and rotational motions are derived. The application of the developed system frequency equation is demonstrated by several illustrative examples. Several end and intermediate conditions are considered. The influence of, rotary inertia, shear deformation, axial load, eccentric mass and elastic segments step ratio on the system natural frequencies and mode shapes are conducted. Several sets of new results are presented. Comparison of the present model results with the experimental data for shaft integrated with intermediate rigid mass demonstrates the accuracy of the analysis in practical applications. The present model is valid for several industrial applications, such as mechanical, structural, naval and for wider range of applications.

  6. The World of 3-D.

    ERIC Educational Resources Information Center

    Mayshark, Robin K.

    1991-01-01

    Students explore three-dimensional properties by creating red and green wall decorations related to Christmas. Students examine why images seem to vibrate when red and green pieces are small and close together. Instructions to conduct the activity and construct 3-D glasses are given. (MDH)

  7. 3D Printing: Exploring Capabilities

    ERIC Educational Resources Information Center

    Samuels, Kyle; Flowers, Jim

    2015-01-01

    As 3D printers become more affordable, schools are using them in increasing numbers. They fit well with the emphasis on product design in technology and engineering education, allowing students to create high-fidelity physical models to see and test different iterations in their product designs. They may also help students to "think in three…

  8. SNL3dFace

    SciTech Connect

    Russ, Trina; Koch, Mark; Koudelka, Melissa; Peters, Ralph; Little, Charles; Boehnen, Chris; Peters, Tanya

    2007-07-20

    This software distribution contains MATLAB and C++ code to enable identity verification using 3D images that may or may not contain a texture component. The code is organized to support system performance testing and system capability demonstration through the proper configuration of the available user interface. Using specific algorithm parameters the face recognition system has been demonstrated to achieve a 96.6% verification rate (Pd) at 0.001 false alarm rate. The system computes robust facial features of a 3D normalized face using Principal Component Analysis (PCA) and Fisher Linear Discriminant Analysis (FLDA). A 3D normalized face is obtained by alighning each face, represented by a set of XYZ coordinated, to a scaled reference face using the Iterative Closest Point (ICP) algorithm. The scaled reference face is then deformed to the input face using an iterative framework with parameters that control the deformed surface regulation an rate of deformation. A variety of options are available to control the information that is encoded by the PCA. Such options include the XYZ coordinates, the difference of each XYZ coordinates from the reference, the Z coordinate, the intensity/texture values, etc. In addition to PCA/FLDA feature projection this software supports feature matching to obtain similarity matrices for performance analysis. In addition, this software supports visualization of the STL, MRD, 2D normalized, and PCA synthetic representations in a 3D environment.

  9. Making Inexpensive 3-D Models

    ERIC Educational Resources Information Center

    Manos, Harry

    2016-01-01

    Visual aids are important to student learning, and they help make the teacher's job easier. Keeping with the "TPT" theme of "The Art, Craft, and Science of Physics Teaching," the purpose of this article is to show how teachers, lacking equipment and funds, can construct a durable 3-D model reference frame and a model gravity…

  10. Constructing 3D microtubule networks using holographic optical trapping

    PubMed Central

    Bergman, J.; Osunbayo, O.; Vershinin, M.

    2015-01-01

    Developing abilities to assemble nanoscale structures is a major scientific and engineering challenge. We report a technique which allows precise positioning and manipulation of individual rigid filaments, enabling construction of custom-designed 3D filament networks. This approach uses holographic optical trapping (HOT) for nano-positioning and microtubules (MTs) as network building blocks. MTs are desirable engineering components due to their high aspect ratio, rigidity, and their ability to serve as substrate for directed nano-transport, reflecting their roles in the eukaryotic cytoskeleton. The 3D architecture of MT cytoskeleton is a significant component of its function, however experimental tools to study the roles of this geometric complexity in a controlled environment have been lacking. We demonstrate the broad capabilities of our system by building a self-supporting 3D MT-based nanostructure and by conducting a MT-based transport experiment on a dynamically adjustable 3D MT intersection. Our methodology not only will advance studies of cytoskeletal networks (and associated processes such as MT-based transport) but will also likely find use in engineering nanostructures and devices. PMID:26657337

  11. TACO3D. 3-D Finite Element Heat Transfer Code

    SciTech Connect

    Mason, W.E.

    1992-03-04

    TACO3D is a three-dimensional, finite-element program for heat transfer analysis. An extension of the two-dimensional TACO program, it can perform linear and nonlinear analyses and can be used to solve either transient or steady-state problems. The program accepts time-dependent or temperature-dependent material properties, and materials may be isotropic or orthotropic. A variety of time-dependent and temperature-dependent boundary conditions and loadings are available including temperature, flux, convection, and radiation boundary conditions and internal heat generation. Additional specialized features treat enclosure radiation, bulk nodes, and master/slave internal surface conditions (e.g., contact resistance). Data input via a free-field format is provided. A user subprogram feature allows for any type of functional representation of any independent variable. A profile (bandwidth) minimization option is available. The code is limited to implicit time integration for transient solutions. TACO3D has no general mesh generation capability. Rows of evenly-spaced nodes and rows of sequential elements may be generated, but the program relies on separate mesh generators for complex zoning. TACO3D does not have the ability to calculate view factors internally. Graphical representation of data in the form of time history and spatial plots is provided through links to the POSTACO and GRAPE postprocessor codes.

  12. Optimisation du tissage de composites orthogonaux 3D

    NASA Astrophysics Data System (ADS)

    Younes, Rafic; Aboura, Zoheir; Benzeggag, Malk

    2008-09-01

    This Note deals with an optimization study for the representative elementary volume (REV) of the 3D orthogonal reinforcement in order to suggest the internal geometry of wicks as well as the prediction of mechanical and damage properties under axial loading. The applied method of optimization is the one of the sequential quadratic programming (SQP). The mechanical properties are determined by a homogenization study based on the average sum of the rigidities of the constituents and the composite resistance is searched starting from the application of the 3D Tsai-Wu failure criterion. The proposition of the weaving is spotted by the internal geometry represented by the fibers volume fractions, their proportions in each direction and the weaving step of the vertical reinforcement. The results of this study are compared to experimental studies about 3D orthogonal with carbon reinforcements. To cite this article: R. Younes et al., C. R. Mecanique 336 (2008).

  13. Lift and thrust generation by a butterfly-like 3D flapping wing model

    NASA Astrophysics Data System (ADS)

    Suzuki, Kosuke; Inamuro, Takaji

    2013-11-01

    The flapping flight of tiny insects such as a butterfly is of fundamental interest not only in biology itself but also in its practical use for the development of micro air vehicles. It is known that a butterfly flaps downward for generating lift force and backward for generating thrust force. In this study, we consider a simple butterfly-like 3D flapping wing model whose body is a thin rod, wings are rigid and rectangular, and wing motion is simplified. We investigate the lift and thrust generation by the butterfly-like flapping wing model by using the immersed boundary-lattice Boltzmann method. Firstly, we compute the lift and thrust forces when the body of the model is fixed for Reynolds numbers in the range of 50 - 1000. In addition, we evaluate the supportable mass for each Reynolds number by using the computed lift force. Secondly, we simulate the free flight where the body can move translationally but cannot rotate. As results, we find that the evaluated supportable mass can be supported even in the free flight, and the wing model with the mass and the Reynolds number of a fruit fly can go upward against the gravity. Finally, we simulate the effect of the rotation of the body. As results, we find that the body has a large pitching motion and consequently gets off-balance.

  14. Discerning nonrigid 3D shapes from motion cues

    PubMed Central

    Jain, Anshul; Zaidi, Qasim

    2011-01-01

    Many organisms and objects deform nonrigidly when moving, requiring perceivers to separate shape changes from object motions. Surprisingly, the abilities of observers to correctly infer nonrigid volumetric shapes from motion cues have not been measured, and structure from motion models predominantly use variants of rigidity assumptions. We show that observers are equally sensitive at discriminating cross-sections of flexing and rigid cylinders based on motion cues, when the cylinders are rotated simultaneously around the vertical and depth axes. A computational model based on motion perspective (i.e., assuming perceived depth is inversely proportional to local velocity) predicted the psychometric curves better than shape from motion factorization models using shape or trajectory basis functions. Asymmetric percepts of symmetric cylinders, arising because of asymmetric velocity profiles, provided additional evidence for the dominant role of relative velocity in shape perception. Finally, we show that inexperienced observers are generally incapable of using motion cues to detect inflation/deflation of rigid and flexing cylinders, but this handicap can be overcome with practice for both nonrigid and rigid shapes. The empirical and computational results of this study argue against the use of rigidity assumptions in extracting 3D shape from motion and for the primacy of motion deformations computed from motion shears. PMID:21205884

  15. GEN3D Ver. 1.37

    SciTech Connect

    2012-01-04

    GEN3D is a three-dimensional mesh generation program. The three-dimensional mesh is generated by mapping a two-dimensional mesh into threedimensions according to one of four types of transformations: translating, rotating, mapping onto a spherical surface, and mapping onto a cylindrical surface. The generated three-dimensional mesh can then be reoriented by offsetting, reflecting about an axis, and revolving about an axis. GEN3D can be used to mesh geometries that are axisymmetric or planar, but, due to three-dimensional loading or boundary conditions, require a three-dimensional finite element mesh and analysis. More importantly, it can be used to mesh complex three-dimensional geometries composed of several sections when the sections can be defined in terms of transformations of two dimensional geometries. The code GJOIN is then used to join the separate sections into a single body. GEN3D reads and writes twodimensional and threedimensional mesh databases in the GENESIS database format; therefore, it is compatible with the preprocessing, postprocessing, and analysis codes used by the Engineering Analysis Department at Sandia National Laboratories, Albuquerque, NM.

  16. Forensic 3D scene reconstruction

    NASA Astrophysics Data System (ADS)

    Little, Charles Q.; Small, Daniel E.; Peters, Ralph R.; Rigdon, J. B.

    2000-05-01

    Traditionally law enforcement agencies have relied on basic measurement and imaging tools, such as tape measures and cameras, in recording a crime scene. A disadvantage of these methods is that they are slow and cumbersome. The development of a portable system that can rapidly record a crime scene with current camera imaging, 3D geometric surface maps, and contribute quantitative measurements such as accurate relative positioning of crime scene objects, would be an asset to law enforcement agents in collecting and recording significant forensic data. The purpose of this project is to develop a fieldable prototype of a fast, accurate, 3D measurement and imaging system that would support law enforcement agents to quickly document and accurately record a crime scene.

  17. 3D Printed Robotic Hand

    NASA Technical Reports Server (NTRS)

    Pizarro, Yaritzmar Rosario; Schuler, Jason M.; Lippitt, Thomas C.

    2013-01-01

    Dexterous robotic hands are changing the way robots and humans interact and use common tools. Unfortunately, the complexity of the joints and actuations drive up the manufacturing cost. Some cutting edge and commercially available rapid prototyping machines now have the ability to print multiple materials and even combine these materials in the same job. A 3D model of a robotic hand was designed using Creo Parametric 2.0. Combining "hard" and "soft" materials, the model was printed on the Object Connex350 3D printer with the purpose of resembling as much as possible the human appearance and mobility of a real hand while needing no assembly. After printing the prototype, strings where installed as actuators to test mobility. Based on printing materials, the manufacturing cost of the hand was $167, significantly lower than other robotic hands without the actuators since they have more complex assembly processes.

  18. Forensic 3D Scene Reconstruction

    SciTech Connect

    LITTLE,CHARLES Q.; PETERS,RALPH R.; RIGDON,J. BRIAN; SMALL,DANIEL E.

    1999-10-12

    Traditionally law enforcement agencies have relied on basic measurement and imaging tools, such as tape measures and cameras, in recording a crime scene. A disadvantage of these methods is that they are slow and cumbersome. The development of a portable system that can rapidly record a crime scene with current camera imaging, 3D geometric surface maps, and contribute quantitative measurements such as accurate relative positioning of crime scene objects, would be an asset to law enforcement agents in collecting and recording significant forensic data. The purpose of this project is to develop a feasible prototype of a fast, accurate, 3D measurement and imaging system that would support law enforcement agents to quickly document and accurately record a crime scene.

  19. 3D-graphite structure

    SciTech Connect

    Belenkov, E. A. Ali-Pasha, V. A.

    2011-01-15

    The structure of clusters of some new carbon 3D-graphite phases have been calculated using the molecular-mechanics methods. It is established that 3D-graphite polytypes {alpha}{sub 1,1}, {alpha}{sub 1,3}, {alpha}{sub 1,5}, {alpha}{sub 2,1}, {alpha}{sub 2,3}, {alpha}{sub 3,1}, {beta}{sub 1,2}, {beta}{sub 1,4}, {beta}{sub 1,6}, {beta}{sub 2,1}, and {beta}{sub 3,2} consist of sp{sup 2}-hybridized atoms, have hexagonal unit cells, and differ in regards to the structure of layers and order of their alternation. A possible way to experimentally synthesize new carbon phases is proposed: the polymerization and carbonization of hydrocarbon molecules.

  20. Rigid particulate matter sensor

    SciTech Connect

    Hall, Matthew

    2011-02-22

    A sensor to detect particulate matter. The sensor includes a first rigid tube, a second rigid tube, a detection surface electrode, and a bias surface electrode. The second rigid tube is mounted substantially parallel to the first rigid tube. The detection surface electrode is disposed on an outer surface of the first rigid tube. The detection surface electrode is disposed to face the second rigid tube. The bias surface electrode is disposed on an outer surface of the second rigid tube. The bias surface electrode is disposed to face the detection surface electrode on the first rigid tube. An air gap exists between the detection surface electrode and the bias surface electrode to allow particulate matter within an exhaust stream to flow between the detection and bias surface electrodes.

  1. [Real time 3D echocardiography

    NASA Technical Reports Server (NTRS)

    Bauer, F.; Shiota, T.; Thomas, J. D.

    2001-01-01

    Three-dimensional representation of the heart is an old concern. Usually, 3D reconstruction of the cardiac mass is made by successive acquisition of 2D sections, the spatial localisation and orientation of which require complex guiding systems. More recently, the concept of volumetric acquisition has been introduced. A matricial emitter-receiver probe complex with parallel data processing provides instantaneous of a pyramidal 64 degrees x 64 degrees volume. The image is restituted in real time and is composed of 3 planes (planes B and C) which can be displaced in all spatial directions at any time during acquisition. The flexibility of this system of acquisition allows volume and mass measurement with greater accuracy and reproducibility, limiting inter-observer variability. Free navigation of the planes of investigation allows reconstruction for qualitative and quantitative analysis of valvular heart disease and other pathologies. Although real time 3D echocardiography is ready for clinical usage, some improvements are still necessary to improve its conviviality. Then real time 3D echocardiography could be the essential tool for understanding, diagnosis and management of patients.

  2. 3D face database for human pattern recognition

    NASA Astrophysics Data System (ADS)

    Song, LiMei; Lu, Lu

    2008-10-01

    Face recognition is an essential work to ensure human safety. It is also an important task in biomedical engineering. 2D image is not enough for precision face recognition. 3D face data includes more exact information, such as the precision size of eyes, mouth, etc. 3D face database is an important part in human pattern recognition. There is a lot of method to get 3D data, such as 3D laser scan system, 3D phase measurement, shape from shading, shape from motion, etc. This paper will introduce a non-orbit, non-contact, non-laser 3D measurement system. The main idea is from shape from stereo technique. Two cameras are used in different angle. A sequence of light will project on the face. Human face, human head, human tooth, human body can all be measured by the system. The visualization data of each person can form to a large 3D face database, which can be used in human recognition. The 3D data can provide a vivid copy of a face, so the recognition exactness can be reached to 100%. Although the 3D data is larger than 2D image, it can be used in the occasion where only few people include, such as the recognition of a family, a small company, etc.

  3. GPU-Accelerated Denoising in 3D (GD3D)

    SciTech Connect

    2013-10-01

    The raw computational power GPU Accelerators enables fast denoising of 3D MR images using bilateral filtering, anisotropic diffusion, and non-local means. This software addresses two facets of this promising application: what tuning is necessary to achieve optimal performance on a modern GPU? And what parameters yield the best denoising results in practice? To answer the first question, the software performs an autotuning step to empirically determine optimal memory blocking on the GPU. To answer the second, it performs a sweep of algorithm parameters to determine the combination that best reduces the mean squared error relative to a noiseless reference image.

  4. Magmatic Systems in 3-D

    NASA Astrophysics Data System (ADS)

    Kent, G. M.; Harding, A. J.; Babcock, J. M.; Orcutt, J. A.; Bazin, S.; Singh, S.; Detrick, R. S.; Canales, J. P.; Carbotte, S. M.; Diebold, J.

    2002-12-01

    Multichannel seismic (MCS) images of crustal magma chambers are ideal targets for advanced visualization techniques. In the mid-ocean ridge environment, reflections originating at the melt-lens are well separated from other reflection boundaries, such as the seafloor, layer 2A and Moho, which enables the effective use of transparency filters. 3-D visualization of seismic reflectivity falls into two broad categories: volume and surface rendering. Volumetric-based visualization is an extremely powerful approach for the rapid exploration of very dense 3-D datasets. These 3-D datasets are divided into volume elements or voxels, which are individually color coded depending on the assigned datum value; the user can define an opacity filter to reject plotting certain voxels. This transparency allows the user to peer into the data volume, enabling an easy identification of patterns or relationships that might have geologic merit. Multiple image volumes can be co-registered to look at correlations between two different data types (e.g., amplitude variation with offsets studies), in a manner analogous to draping attributes onto a surface. In contrast, surface visualization of seismic reflectivity usually involves producing "fence" diagrams of 2-D seismic profiles that are complemented with seafloor topography, along with point class data, draped lines and vectors (e.g. fault scarps, earthquake locations and plate-motions). The overlying seafloor can be made partially transparent or see-through, enabling 3-D correlations between seafloor structure and seismic reflectivity. Exploration of 3-D datasets requires additional thought when constructing and manipulating these complex objects. As numbers of visual objects grow in a particular scene, there is a tendency to mask overlapping objects; this clutter can be managed through the effective use of total or partial transparency (i.e., alpha-channel). In this way, the co-variation between different datasets can be investigated

  5. Surface Plasmons in 3D Topological Insulators

    NASA Astrophysics Data System (ADS)

    Kogar, Anshul; Vig, Sean; Cho, Gil; Thaler, Alexander; Xiao, Yiran; Hughes, Taylor; Wong, Man-Hong; Chiang, Tai-Chang; MacDougall, Greg; Abbamonte, Peter

    2015-03-01

    Most studies of three-dimensional (3D) topological insulators have concentrated on their one-electron properties as exhibited by angle-resolved photoemission spectroscopy (ARPES) or by scanning tunneling microscopy (STM). Many-body interactions are often neglected in the treatment of models of topological insulators, such as in the Kane-Mele and Bernevig-Hughes-Zhang models. Using angle-resolved inelastic electron scattering from the surface, I will present data on the collective mode that owes its existence to the presence of many-body interactions, the surface plasmon (SP), in two known 3D topological insulators, Bi2Se3 and Bi0.5Sb1.5Se1 . 5 + xTe1 . 5 - x. Surprisingly, the SP was prominent even after depressing the Fermi energy into the bulk band gap. Having studied the SP as a function of doping, momentum transfer and its aging properties, I will present evidence to suggest that bulk-surface coupling is crucial in explaining many of its properties. A simple model with dynamic bulk screening will be presented showing qualitative agreement with the observations. Lastly, the relation of the observed surface plasmon to the predicted spin-plasmon mode and to the kinks seen in the electronic dispersion as measured by ARPES will be discussed. The work was supported as part of the Center for Emergent Superconductivity, an Energy Frontier Research Center funded by the U.S. Department of Energy, Office of Science.

  6. Balance and coordination after viewing stereoscopic 3D television

    PubMed Central

    Read, Jenny C. A.; Simonotto, Jennifer; Bohr, Iwo; Godfrey, Alan; Galna, Brook; Rochester, Lynn; Smulders, Tom V.

    2015-01-01

    Manufacturers and the media have raised the possibility that viewing stereoscopic 3D television (S3D TV) may cause temporary disruption to balance and visuomotor coordination. We looked for evidence of such effects in a laboratory-based study. Four hundred and thirty-three people aged 4–82 years old carried out tests of balance and coordination before and after viewing an 80 min movie in either conventional 2D or stereoscopic 3D, while wearing two triaxial accelerometers. Accelerometry produced little evidence of any change in body motion associated with S3D TV. We found no evidence that viewing the movie in S3D causes a detectable impairment in balance or in visuomotor coordination. PMID:26587261

  7. Large-scale three-dimensional measurement via combining 3D scanner and laser rangefinder.

    PubMed

    Shi, Jinlong; Sun, Zhengxing; Bai, Suqin

    2015-04-01

    This paper presents a three-dimensional (3D) measurement method of large-scale objects by integrating a 3D scanner and a laser rangefinder. The 3D scanner, used to perform partial section measurement, is fixed on a robotic arm which can slide on a guide rail. The laser rangefinder, used to compute poses of the 3D scanner, is rigidly connected to the 3D scanner. During large-scale measurement, after measuring a partial section, the 3D scanner is straightly moved forward along the guide rail to measure another section. Meanwhile, the poses of the 3D scanner are estimated according to its moved distance for different partial section alignments. The performance and effectiveness are evaluated by experiments.

  8. Interactive 3D Mars Visualization

    NASA Technical Reports Server (NTRS)

    Powell, Mark W.

    2012-01-01

    The Interactive 3D Mars Visualization system provides high-performance, immersive visualization of satellite and surface vehicle imagery of Mars. The software can be used in mission operations to provide the most accurate position information for the Mars rovers to date. When integrated into the mission data pipeline, this system allows mission planners to view the location of the rover on Mars to 0.01-meter accuracy with respect to satellite imagery, with dynamic updates to incorporate the latest position information. Given this information so early in the planning process, rover drivers are able to plan more accurate drive activities for the rover than ever before, increasing the execution of science activities significantly. Scientifically, this 3D mapping information puts all of the science analyses to date into geologic context on a daily basis instead of weeks or months, as was the norm prior to this contribution. This allows the science planners to judge the efficacy of their previously executed science observations much more efficiently, and achieve greater science return as a result. The Interactive 3D Mars surface view is a Mars terrain browsing software interface that encompasses the entire region of exploration for a Mars surface exploration mission. The view is interactive, allowing the user to pan in any direction by clicking and dragging, or to zoom in or out by scrolling the mouse or touchpad. This set currently includes tools for selecting a point of interest, and a ruler tool for displaying the distance between and positions of two points of interest. The mapping information can be harvested and shared through ubiquitous online mapping tools like Google Mars, NASA WorldWind, and Worldwide Telescope.

  9. 3D Nanostructuring of Semiconductors

    NASA Astrophysics Data System (ADS)

    Blick, Robert

    2000-03-01

    Modern semiconductor technology allows to machine devices on the nanometer scale. I will discuss the current limits of the fabrication processes, which enable the definition of single electron transistors with dimensions down to 8 nm. In addition to the conventional 2D patterning and structuring of semiconductors, I will demonstrate how to apply 3D nanostructuring techniques to build freely suspended single-crystal beams with lateral dimension down to 20 nm. In transport measurements in the temperature range from 30 mK up to 100 K these nano-crystals are characterized regarding their electronic as well as their mechanical properties. Moreover, I will present possible applications of these devices.

  10. What Lies Ahead (3-D)

    NASA Technical Reports Server (NTRS)

    2004-01-01

    This 3-D cylindrical-perspective mosaic taken by the navigation camera on the Mars Exploration Rover Spirit on sol 82 shows the view south of the large crater dubbed 'Bonneville.' The rover will travel toward the Columbia Hills, seen here at the upper left. The rock dubbed 'Mazatzal' and the hole the rover drilled in to it can be seen at the lower left. The rover's position is referred to as 'Site 22, Position 32.' This image was geometrically corrected to make the horizon appear flat.

  11. Making Inexpensive 3-D Models

    NASA Astrophysics Data System (ADS)

    Manos, Harry

    2016-03-01

    Visual aids are important to student learning, and they help make the teacher's job easier. Keeping with the TPT theme of "The Art, Craft, and Science of Physics Teaching," the purpose of this article is to show how teachers, lacking equipment and funds, can construct a durable 3-D model reference frame and a model gravity well tailored to specific class lessons. Most of the supplies are readily available in the home or at school: rubbing alcohol, a rag, two colors of spray paint, art brushes, and masking tape. The cost of these supplies, if you don't have them, is less than 20.

  12. A Clean Adirondack (3-D)

    NASA Technical Reports Server (NTRS)

    2004-01-01

    This is a 3-D anaglyph showing a microscopic image taken of an area measuring 3 centimeters (1.2 inches) across on the rock called Adirondack. The image was taken at Gusev Crater on the 33rd day of the Mars Exploration Rover Spirit's journey (Feb. 5, 2004), after the rover used its rock abrasion tool brush to clean the surface of the rock. Dust, which was pushed off to the side during cleaning, can still be seen to the left and in low areas of the rock.

  13. 3D Printed Shelby Cobra

    SciTech Connect

    Love, Lonnie

    2015-01-09

    ORNL's newly printed 3D Shelby Cobra was showcased at the 2015 NAIAS in Detroit. This "laboratory on wheels" uses the Shelby Cobra design, celebrating the 50th anniversary of this model and honoring the first vehicle to be voted a national monument. The Shelby was printed at the Department of Energy’s Manufacturing Demonstration Facility at ORNL using the BAAM (Big Area Additive Manufacturing) machine and is intended as a “plug-n-play” laboratory on wheels. The Shelby will allow research and development of integrated components to be tested and enhanced in real time, improving the use of sustainable, digital manufacturing solutions in the automotive industry.

  14. 2-D Versus 3-D Magnetotelluric Data Interpretation

    NASA Astrophysics Data System (ADS)

    Ledo, Juanjo

    2005-09-01

    In recent years, the number of publications dealing with the mathematical and physical 3-D aspects of the magnetotelluric method has increased drastically. However, field experiments on a grid are often impractical and surveys are frequently restricted to single or widely separated profiles. So, in many cases we find ourselves with the following question: is the applicability of the 2-D hypothesis valid to extract geoelectric and geological information from real 3-D environments? The aim of this paper is to explore a few instructive but general situations to understand the basics of a 2-D interpretation of 3-D magnetotelluric data and to determine which data subset (TE-mode or TM-mode) is best for obtaining the electrical conductivity distribution of the subsurface using 2-D techniques. A review of the mathematical and physical fundamentals of the electromagnetic fields generated by a simple 3-D structure allows us to prioritise the choice of modes in a 2-D interpretation of responses influenced by 3-D structures. This analysis is corroborated by numerical results from synthetic models and by real data acquired by other authors. One important result of this analysis is that the mode most unaffected by 3-D effects depends on the position of the 3-D structure with respect to the regional 2-D strike direction. When the 3-D body is normal to the regional strike, the TE-mode is affected mainly by galvanic effects, while the TM-mode is affected by galvanic and inductive effects. In this case, a 2-D interpretation of the TM-mode is prone to error. When the 3-D body is parallel to the regional 2-D strike the TE-mode is affected by galvanic and inductive effects and the TM-mode is affected mainly by galvanic effects, making it more suitable for 2-D interpretation. In general, a wise 2-D interpretation of 3-D magnetotelluric data can be a guide to a reasonable geological interpretation.

  15. 2D/3D Image Registration using Regression Learning

    PubMed Central

    Chou, Chen-Rui; Frederick, Brandon; Mageras, Gig; Chang, Sha; Pizer, Stephen

    2013-01-01

    In computer vision and image analysis, image registration between 2D projections and a 3D image that achieves high accuracy and near real-time computation is challenging. In this paper, we propose a novel method that can rapidly detect an object’s 3D rigid motion or deformation from a 2D projection image or a small set thereof. The method is called CLARET (Correction via Limited-Angle Residues in External Beam Therapy) and consists of two stages: registration preceded by shape space and regression learning. In the registration stage, linear operators are used to iteratively estimate the motion/deformation parameters based on the current intensity residue between the target projec-tion(s) and the digitally reconstructed radiograph(s) (DRRs) of the estimated 3D image. The method determines the linear operators via a two-step learning process. First, it builds a low-order parametric model of the image region’s motion/deformation shape space from its prior 3D images. Second, using learning-time samples produced from the 3D images, it formulates the relationships between the model parameters and the co-varying 2D projection intensity residues by multi-scale linear regressions. The calculated multi-scale regression matrices yield the coarse-to-fine linear operators used in estimating the model parameters from the 2D projection intensity residues in the registration. The method’s application to Image-guided Radiation Therapy (IGRT) requires only a few seconds and yields good results in localizing a tumor under rigid motion in the head and neck and under respiratory deformation in the lung, using one treatment-time imaging 2D projection or a small set thereof. PMID:24058278

  16. Positional Awareness Map 3D (PAM3D)

    NASA Technical Reports Server (NTRS)

    Hoffman, Monica; Allen, Earl L.; Yount, John W.; Norcross, April Louise

    2012-01-01

    The Western Aeronautical Test Range of the National Aeronautics and Space Administration s Dryden Flight Research Center needed to address the aging software and hardware of its current situational awareness display application, the Global Real-Time Interactive Map (GRIM). GRIM was initially developed in the late 1980s and executes on older PC architectures using a Linux operating system that is no longer supported. Additionally, the software is difficult to maintain due to its complexity and loss of developer knowledge. It was decided that a replacement application must be developed or acquired in the near future. The replacement must provide the functionality of the original system, the ability to monitor test flight vehicles in real-time, and add improvements such as high resolution imagery and true 3-dimensional capability. This paper will discuss the process of determining the best approach to replace GRIM, and the functionality and capabilities of the first release of the Positional Awareness Map 3D.

  17. 3D printed bionic ears.

    PubMed

    Mannoor, Manu S; Jiang, Ziwen; James, Teena; Kong, Yong Lin; Malatesta, Karen A; Soboyejo, Winston O; Verma, Naveen; Gracias, David H; McAlpine, Michael C

    2013-06-12

    The ability to three-dimensionally interweave biological tissue with functional electronics could enable the creation of bionic organs possessing enhanced functionalities over their human counterparts. Conventional electronic devices are inherently two-dimensional, preventing seamless multidimensional integration with synthetic biology, as the processes and materials are very different. Here, we present a novel strategy for overcoming these difficulties via additive manufacturing of biological cells with structural and nanoparticle derived electronic elements. As a proof of concept, we generated a bionic ear via 3D printing of a cell-seeded hydrogel matrix in the anatomic geometry of a human ear, along with an intertwined conducting polymer consisting of infused silver nanoparticles. This allowed for in vitro culturing of cartilage tissue around an inductive coil antenna in the ear, which subsequently enables readout of inductively-coupled signals from cochlea-shaped electrodes. The printed ear exhibits enhanced auditory sensing for radio frequency reception, and complementary left and right ears can listen to stereo audio music. Overall, our approach suggests a means to intricately merge biologic and nanoelectronic functionalities via 3D printing.

  18. 3D Printable Graphene Composite

    PubMed Central

    Wei, Xiaojun; Li, Dong; Jiang, Wei; Gu, Zheming; Wang, Xiaojuan; Zhang, Zengxing; Sun, Zhengzong

    2015-01-01

    In human being’s history, both the Iron Age and Silicon Age thrived after a matured massive processing technology was developed. Graphene is the most recent superior material which could potentially initialize another new material Age. However, while being exploited to its full extent, conventional processing methods fail to provide a link to today’s personalization tide. New technology should be ushered in. Three-dimensional (3D) printing fills the missing linkage between graphene materials and the digital mainstream. Their alliance could generate additional stream to push the graphene revolution into a new phase. Here we demonstrate for the first time, a graphene composite, with a graphene loading up to 5.6 wt%, can be 3D printable into computer-designed models. The composite’s linear thermal coefficient is below 75 ppm·°C−1 from room temperature to its glass transition temperature (Tg), which is crucial to build minute thermal stress during the printing process. PMID:26153673

  19. 3D Printed Bionic Ears

    PubMed Central

    Mannoor, Manu S.; Jiang, Ziwen; James, Teena; Kong, Yong Lin; Malatesta, Karen A.; Soboyejo, Winston O.; Verma, Naveen; Gracias, David H.; McAlpine, Michael C.

    2013-01-01

    The ability to three-dimensionally interweave biological tissue with functional electronics could enable the creation of bionic organs possessing enhanced functionalities over their human counterparts. Conventional electronic devices are inherently two-dimensional, preventing seamless multidimensional integration with synthetic biology, as the processes and materials are very different. Here, we present a novel strategy for overcoming these difficulties via additive manufacturing of biological cells with structural and nanoparticle derived electronic elements. As a proof of concept, we generated a bionic ear via 3D printing of a cell-seeded hydrogel matrix in the precise anatomic geometry of a human ear, along with an intertwined conducting polymer consisting of infused silver nanoparticles. This allowed for in vitro culturing of cartilage tissue around an inductive coil antenna in the ear, which subsequently enables readout of inductively-coupled signals from cochlea-shaped electrodes. The printed ear exhibits enhanced auditory sensing for radio frequency reception, and complementary left and right ears can listen to stereo audio music. Overall, our approach suggests a means to intricately merge biologic and nanoelectronic functionalities via 3D printing. PMID:23635097

  20. Martian terrain & airbags - 3D

    NASA Technical Reports Server (NTRS)

    1997-01-01

    Portions of the lander's deflated airbags and a petal are at lower left in this image, taken in stereo by the Imager for Mars Pathfinder (IMP) on Sol 3. 3D glasses are necessary to identify surface detail. This image is part of a 3D 'monster' panorama of the area surrounding the landing site.

    Mars Pathfinder is the second in NASA's Discovery program of low-cost spacecraft with highly focused science goals. The Jet Propulsion Laboratory, Pasadena, CA, developed and manages the Mars Pathfinder mission for NASA's Office of Space Science, Washington, D.C. JPL is an operating division of the California Institute of Technology (Caltech). The Imager for Mars Pathfinder (IMP) was developed by the University of Arizona Lunar and Planetary Laboratory under contract to JPL. Peter Smith is the Principal Investigator.

    Click below to see the left and right views individually. [figure removed for brevity, see original site] Left [figure removed for brevity, see original site] Right

  1. Martian terrain & airbags - 3D

    NASA Technical Reports Server (NTRS)

    1997-01-01

    Portions of the lander's deflated airbags and a petal are at the lower area of this image, taken in stereo by the Imager for Mars Pathfinder (IMP) on Sol 3. 3D glasses are necessary to identify surface detail. This image is part of a 3D 'monster' panorama of the area surrounding the landing site.

    Mars Pathfinder is the second in NASA's Discovery program of low-cost spacecraft with highly focused science goals. The Jet Propulsion Laboratory, Pasadena, CA, developed and manages the Mars Pathfinder mission for NASA's Office of Space Science, Washington, D.C. JPL is an operating division of the California Institute of Technology (Caltech). The Imager for Mars Pathfinder (IMP) was developed by the University of Arizona Lunar and Planetary Laboratory under contract to JPL. Peter Smith is the Principal Investigator.

    Click below to see the left and right views individually. [figure removed for brevity, see original site] Left [figure removed for brevity, see original site] Right

  2. 3D structured illumination microscopy

    NASA Astrophysics Data System (ADS)

    Dougherty, William M.; Goodwin, Paul C.

    2011-03-01

    Three-dimensional structured illumination microscopy achieves double the lateral and axial resolution of wide-field microscopy, using conventional fluorescent dyes, proteins and sample preparation techniques. A three-dimensional interference-fringe pattern excites the fluorescence, filling in the "missing cone" of the wide field optical transfer function, thereby enabling axial (z) discrimination. The pattern acts as a spatial carrier frequency that mixes with the higher spatial frequency components of the image, which usually succumb to the diffraction limit. The fluorescence image encodes the high frequency content as a down-mixed, moiré-like pattern. A series of images is required, wherein the 3D pattern is shifted and rotated, providing down-mixed data for a system of linear equations. Super-resolution is obtained by solving these equations. The speed with which the image series can be obtained can be a problem for the microscopy of living cells. Challenges include pattern-switching speeds, optical efficiency, wavefront quality and fringe contrast, fringe pitch optimization, and polarization issues. We will review some recent developments in 3D-SIM hardware with the goal of super-resolved z-stacks of motile cells.

  3. Multi-camera system for 3D forensic documentation.

    PubMed

    Leipner, Anja; Baumeister, Rilana; Thali, Michael J; Braun, Marcel; Dobler, Erika; Ebert, Lars C

    2016-04-01

    Three-dimensional (3D) surface documentation is well established in forensic documentation. The most common systems include laser scanners and surface scanners with optical 3D cameras. An additional documentation tool is photogrammetry. This article introduces the botscan© (botspot GmbH, Berlin, Germany) multi-camera system for the forensic markerless photogrammetric whole body 3D surface documentation of living persons in standing posture. We used the botscan© multi-camera system to document a person in 360°. The system has a modular design and works with 64 digital single-lens reflex (DSLR) cameras. The cameras were evenly distributed in a circular chamber. We generated 3D models from the photographs using the PhotoScan© (Agisoft LLC, St. Petersburg, Russia) software. Our results revealed that the botscan© and PhotoScan© produced 360° 3D models with detailed textures. The 3D models had very accurate geometries and could be scaled to full size with the help of scale bars. In conclusion, this multi-camera system provided a rapid and simple method for documenting the whole body of a person to generate 3D data with Photoscan©.

  4. 3D Human Motion Editing and Synthesis: A Survey

    PubMed Central

    Wang, Xin; Chen, Qiudi; Wang, Wanliang

    2014-01-01

    The ways to compute the kinematics and dynamic quantities of human bodies in motion have been studied in many biomedical papers. This paper presents a comprehensive survey of 3D human motion editing and synthesis techniques. Firstly, four types of methods for 3D human motion synthesis are introduced and compared. Secondly, motion capture data representation, motion editing, and motion synthesis are reviewed successively. Finally, future research directions are suggested. PMID:25045395

  5. Mechanical properties of 3D printed warped membranes

    NASA Astrophysics Data System (ADS)

    Kosmrlj, Andrej; Xiao, Kechao; Weaver, James C.; Vlassak, Joost J.; Nelson, David R.

    2015-03-01

    We explore how a frozen background metric affects the mechanical properties of solid planar membranes. Our focus is a special class of ``warped membranes'' with a preferred random height profile characterized by random Gaussian variables h (q) in Fourier space with zero mean and variance < | h (q) | 2 > q-m . It has been shown theoretically that in the linear response regime, this quenched random disorder increases the effective bending rigidity, while the Young's and shear moduli are reduced. Compared to flat plates of the same thickness t, the bending rigidity of warped membranes is increased by a factor hv / t while the in-plane elastic moduli are reduced by t /hv , where hv =√{< | h (x) | 2 > } describes the frozen height fluctuations. Interestingly, hv is system size dependent for warped membranes characterized with m > 2 . We present experimental tests of these predictions, using warped membranes prepared via high resolution 3D printing.

  6. 3D Printing of Graphene Aerogels.

    PubMed

    Zhang, Qiangqiang; Zhang, Feng; Medarametla, Sai Pradeep; Li, Hui; Zhou, Chi; Lin, Dong

    2016-04-06

    3D printing of a graphene aerogel with true 3D overhang structures is highlighted. The aerogel is fabricated by combining drop-on-demand 3D printing and freeze casting. The water-based GO ink is ejected and freeze-cast into designed 3D structures. The lightweight (<10 mg cm(-3) ) 3D printed graphene aerogel presents superelastic and high electrical conduction.

  7. Quasi 3D dispersion experiment

    NASA Astrophysics Data System (ADS)

    Bakucz, P.

    2003-04-01

    This paper studies the problem of tracer dispersion in a coloured fluid flowing through a two-phase 3D rough channel-system in a 40 cm*40 cm plexi-container filled by homogen glass fractions and colourless fluid. The unstable interface between the driving coloured fluid and the colourless fluid develops viscous fingers with a fractal structure at high capillary number. Five two-dimensional fractal fronts have been observed at the same time using four cameras along the vertical side-walls and using one camera located above the plexi-container. In possession of five fronts the spatial concentration contours are determined using statistical models. The concentration contours are self-affine fractal curves with a fractal dimension D=2.19. This result is valid for disperison at high Péclet numbers.

  8. ShowMe3D

    SciTech Connect

    Sinclair, Michael B

    2012-01-05

    ShowMe3D is a data visualization graphical user interface specifically designed for use with hyperspectral image obtained from the Hyperspectral Confocal Microscope. The program allows the user to select and display any single image from a three dimensional hyperspectral image stack. By moving a slider control, the user can easily move between images of the stack. The user can zoom into any region of the image. The user can select any pixel or region from the displayed image and display the fluorescence spectrum associated with that pixel or region. The user can define up to 3 spectral filters to apply to the hyperspectral image and view the image as it would appear from a filter-based confocal microscope. The user can also obtain statistics such as intensity average and variance from selected regions.

  9. 3D Printed Shelby Cobra

    ScienceCinema

    Love, Lonnie

    2016-11-02

    ORNL's newly printed 3D Shelby Cobra was showcased at the 2015 NAIAS in Detroit. This "laboratory on wheels" uses the Shelby Cobra design, celebrating the 50th anniversary of this model and honoring the first vehicle to be voted a national monument. The Shelby was printed at the Department of Energy’s Manufacturing Demonstration Facility at ORNL using the BAAM (Big Area Additive Manufacturing) machine and is intended as a “plug-n-play” laboratory on wheels. The Shelby will allow research and development of integrated components to be tested and enhanced in real time, improving the use of sustainable, digital manufacturing solutions in the automotive industry.

  10. Supernova Remnant in 3-D

    NASA Technical Reports Server (NTRS)

    2009-01-01

    wavelengths. Since the amount of the wavelength shift is related to the speed of motion, one can determine how fast the debris are moving in either direction. Because Cas A is the result of an explosion, the stellar debris is expanding radially outwards from the explosion center. Using simple geometry, the scientists were able to construct a 3-D model using all of this information. A program called 3-D Slicer modified for astronomical use by the Astronomical Medicine Project at Harvard University in Cambridge, Mass. was used to display and manipulate the 3-D model. Commercial software was then used to create the 3-D fly-through.

    The blue filaments defining the blast wave were not mapped using the Doppler effect because they emit a different kind of light synchrotron radiation that does not emit light at discrete wavelengths, but rather in a broad continuum. The blue filaments are only a representation of the actual filaments observed at the blast wave.

    This visualization shows that there are two main components to this supernova remnant: a spherical component in the outer parts of the remnant and a flattened (disk-like) component in the inner region. The spherical component consists of the outer layer of the star that exploded, probably made of helium and carbon. These layers drove a spherical blast wave into the diffuse gas surrounding the star. The flattened component that astronomers were unable to map into 3-D prior to these Spitzer observations consists of the inner layers of the star. It is made from various heavier elements, not all shown in the visualization, such as oxygen, neon, silicon, sulphur, argon and iron.

    High-velocity plumes, or jets, of this material are shooting out from the explosion in the plane of the disk-like component mentioned above. Plumes of silicon appear in the northeast and southwest, while those of iron are seen in the southeast and north. These jets were already known and Doppler velocity measurements have been made for these

  11. [Evaluation of Motion Sickness Induced by 3D Video Clips].

    PubMed

    Matsuura, Yasuyuki; Takada, Hiroki

    2016-01-01

    The use of stereoscopic images has been spreading rapidly. Nowadays, stereoscopic movies are nothing new to people. Stereoscopic systems date back to 280 A.D. when Euclid first recognized the concept of depth perception by humans. Despite the increase in the production of three-dimensional (3D) display products and many studies on stereoscopic vision, the effect of stereoscopic vision on the human body has been insufficiently understood. However, symptoms such as eye fatigue and 3D sickness have been the concerns when viewing 3D films for a prolonged period of time; therefore, it is important to consider the safety of viewing virtual 3D contents as a contribution to society. It is generally explained to the public that accommodation and convergence are mismatched during stereoscopic vision and that this is the main reason for the visual fatigue and visually induced motion sickness (VIMS) during 3D viewing. We have devised a method to simultaneously measure lens accommodation and convergence. We used this simultaneous measurement device to characterize 3D vision. Fixation distance was compared between accommodation and convergence during the viewing of 3D films with repeated measurements. Time courses of these fixation distances and their distributions were compared in subjects who viewed 2D and 3D video clips. The results indicated that after 90 s of continuously viewing 3D images, the accommodative power does not correspond to the distance of convergence. In this paper, remarks on methods to measure the severity of motion sickness induced by viewing 3D films are also given. From the epidemiological viewpoint, it is useful to obtain novel knowledge for reduction and/or prevention of VIMS. We should accumulate empirical data on motion sickness, which may contribute to the development of relevant fields in science and technology.

  12. (abstract) 3D Electromagnetic Plasma Particle Simulations

    NASA Technical Reports Server (NTRS)

    Wang, J.; Liewer, P. C.; Lyster, P.; Decyk, V. K.

    1993-01-01

    A 3D electromagnetic plasma particle-in-cell code has been developed using the General Concurrent PIC algorithm. The GCPIC algorithm uses a domain decomposition to divide the computation among the processors. Particles must be exchanged between processors as they move. The efficiencies for 1-, 2-, and 3-dimensional partitions of the three dimensional domain are compared, and the algorithm is found to be very efficient even when a large fraction (e.g., 30%) of the particles must be exchanged at every time step. This PIC code has been used to perform simulations of a variety of space plasma physics problems. Results of three applications will be discussed: 1) plasma disturbances induced by moving conducting bodies in a magnetized plasma; 2) plasma plume interactions; and 3) solar wind termination shock.

  13. Contact Interface Verification for DYNA3D Scenario 2: Multi-Surface Contact

    SciTech Connect

    McMichael, L D

    2006-05-10

    A suite of test problems has been developed to examine contact behavior within the nonlinear, three-dimensional, explicit finite element analysis (FEA) code DYNA3D (Lin, 2005). The test problems use multiple interfaces and a combination of enforcement methods to assess the basic functionality of the contact algorithms. The results from the DYNA3D analyses are compared to closed form solutions to verify the contact behavior. This work was performed as part of the Verification and Validation efforts of LLNL W Program within the NNSA's Advanced Simulation and Computing (ASC) Program. DYNA3D models the transient dynamic response of solids and structures including the interactions between disjoint bodies (parts). A wide variety of contact surfaces are available to represent the diverse interactions possible during an analysis, including relative motion (sliding), separation and gap closure (voids), and fixed relative position (tied). The problem geometry may be defined using a combination of element formulations, including one-dimensional beam and truss elements, two-dimensional shell elements, and three-dimensional solid elements. Consequently, it is necessary to consider various element interactions during contact. This report and associated test problems examine the scenario where multiple bodies interact with each other via multiple interfaces. The test problems focus on whether any ordering issues exist in the contact logic by using a combination of interface types, contact enforcement options (i.e., penalty, Lagrange, and kinematic), and element interactions within each problem. The influence of rigid materials on interface behavior is also examined. The companion report (McMichael, 2006) and associated test problems address the basic contact scenario where one contact surface exists between two disjoint bodies. The test problems are analyzed using version 5.2 (compiled on 12/22/2005) of DYNA3D. The analytical results are used to form baseline solutions for

  14. A hand-held 3D laser scanning with global positioning system of subvoxel precision

    NASA Astrophysics Data System (ADS)

    Arias, Néstor; Meneses, Néstor; Meneses, Jaime; Gharbi, Tijani

    2011-01-01

    In this paper we propose a hand-held 3D laser scanner composed of an optical head device to extract 3D local surface information and a stereo vision system with subvoxel precision to measure the position and orientation of the 3D optical head. The optical head is manually scanned over the surface object by the operator. The orientation and position of the 3D optical head is determined by a phase-sensitive method using a 2D regular intensity pattern. This phase reference pattern is rigidly fixed to the optical head and allows their 3D location with subvoxel precision in the observation field of the stereo vision system. The 3D resolution achieved by the stereo vision system is about 33 microns at 1.8 m with an observation field of 60cm x 60cm.

  15. 3D Kitaev spin liquids

    NASA Astrophysics Data System (ADS)

    Hermanns, Maria

    The Kitaev honeycomb model has become one of the archetypal spin models exhibiting topological phases of matter, where the magnetic moments fractionalize into Majorana fermions interacting with a Z2 gauge field. In this talk, we discuss generalizations of this model to three-dimensional lattice structures. Our main focus is the metallic state that the emergent Majorana fermions form. In particular, we discuss the relation of the nature of this Majorana metal to the details of the underlying lattice structure. Besides (almost) conventional metals with a Majorana Fermi surface, one also finds various realizations of Dirac semi-metals, where the gapless modes form Fermi lines or even Weyl nodes. We introduce a general classification of these gapless quantum spin liquids using projective symmetry analysis. Furthermore, we briefly outline why these Majorana metals in 3D Kitaev systems provide an even richer variety of Dirac and Weyl phases than possible for electronic matter and comment on possible experimental signatures. Work done in collaboration with Kevin O'Brien and Simon Trebst.

  16. 3D multiplexed immunoplasmonics microscopy

    NASA Astrophysics Data System (ADS)

    Bergeron, Éric; Patskovsky, Sergiy; Rioux, David; Meunier, Michel

    2016-07-01

    Selective labelling, identification and spatial distribution