Science.gov

Sample records for absorption spectrum reveals

  1. Revealing spectral features in two-photon absorption spectrum of Hoechst 33342: a combined experimental and quantum-chemical study.

    PubMed

    Olesiak-Banska, Joanna; Matczyszyn, Katarzyna; Zaleśny, Robert; Murugan, N Arul; Kongsted, Jacob; Ågren, Hans; Bartkowiak, Wojciech; Samoc, Marek

    2013-10-10

    We present the results of wide spectral range Z-scan measurements of the two-photon absorption (2PA) spectrum of the Hoechst 33342 dye. The strongest 2PA of the dye in aqueous solution is found at 575 nm, and the associated two-photon absorption cross section is 245 GM. A weak but clearly visible 2PA band at ∼850 nm is also observed, a feature that could not be anticipated from the one-photon absorption spectrum. On the basis of the results of hybrid quantum mechanics/molecular mechanics calculations, we put forward a notion that the long-wavelength feature observed in the two-photon absorption spectrum of Hoechst 33342 is due to the formation of dye aggregates.

  2. Ultraviolet absorption spectrum of HOCl

    NASA Technical Reports Server (NTRS)

    Burkholder, James B.

    1993-01-01

    The room temperature UV absorption spectrum of HOCl was measured over the wavelength range 200 to 380 nm with a diode array spectrometer. The absorption spectrum was identified from UV absorption spectra recorded following UV photolysis of equilibrium mixtures of Cl2O/H2O/HOCl. The HOCl spectrum is continuous with a maximum at 242 nm and a secondary peak at 304 nm. The measured absorption cross section at 242 nm was (2.1 +/- 0.3) x 10 exp -19/sq cm (2 sigma error limits). These results are in excellent agreement with the work of Knauth et al. (1979) but in poor agreement with the more recent measurements of Mishalanie et al. (1986) and Permien et al. (1988). An HOCl nu2 infrared band intensity of 230 +/- 35/sq cm atm was determined based on this UV absorption cross section. The present results are compared with these previous measurements and the discrepancies are discussed.

  3. The Absorption Spectrum of Sodium Vapor

    ERIC Educational Resources Information Center

    Ashby, R. A.; Gotthard, H. W.

    1974-01-01

    Procedures and discussion of an experiment to be used in an undergraduate course in spectroscopy are presented. The experiment involves the measurement of the absorption spectrum of sodium vapor. (DT)

  4. Quantum Entanglement Molecular Absorption Spectrum Simulator

    NASA Technical Reports Server (NTRS)

    Nguyen, Quang-Viet; Kojima, Jun

    2006-01-01

    Quantum Entanglement Molecular Absorption Spectrum Simulator (QE-MASS) is a computer program for simulating two photon molecular-absorption spectroscopy using quantum-entangled photons. More specifically, QE-MASS simulates the molecular absorption of two quantum-entangled photons generated by the spontaneous parametric down-conversion (SPDC) of a fixed-frequency photon from a laser. The two-photon absorption process is modeled via a combination of rovibrational and electronic single-photon transitions, using a wave-function formalism. A two-photon absorption cross section as a function of the entanglement delay time between the two photons is computed, then subjected to a fast Fourier transform to produce an energy spectrum. The program then detects peaks in the Fourier spectrum and displays the energy levels of very short-lived intermediate quantum states (or virtual states) of the molecule. Such virtual states were only previously accessible using ultra-fast (femtosecond) laser systems. However, with the use of a single-frequency continuous wave laser to produce SPDC photons, and QEMASS program, these short-lived molecular states can now be studied using much simpler laser systems. QE-MASS can also show the dependence of the Fourier spectrum on the tuning range of the entanglement time of any externally introduced optical-path delay time. QE-MASS can be extended to any molecule for which an appropriate spectroscopic database is available. It is a means of performing an a priori parametric analysis of entangled photon spectroscopy for development and implementation of emerging quantum-spectroscopic sensing techniques. QE-MASS is currently implemented using the Mathcad software package.

  5. [Measurement and analysis of absorption spectrum of human blood].

    PubMed

    Zhao, Zhi-Min; Xin, Yu-Jun; Wang, Le-Xin; Zhu, Wei-Hua; Zheng, Min; Guo, Xin

    2008-01-01

    The present paper puts forward a method of disease diagnosis by using the technology of spectrum analysis of human blood serum. The generation mechanism of absorption spectrum is explained and the absorption spectra of the normal blood serum and the sick blood serum are listed from the experiments of absorption spectrometry. Though the value of absorbency of the sick blood serum is almost equal to that of the normal blood serum in the most absorption spectra, there are some differences around 278 nm in the absorption spectrum. The absorbency of the blood serum with hyperglycemia is greater than that of the normal blood serum at 285 nm in the spectrum, and besides, there comes a peak shift of absorption with hyperglycemia. In the absorption spectrum of the blood serum with hypercholesterolemia, there is a clear absorption peak at 414 nm. However there is not any peak at that wavelength in the absorption spectrum of the normal blood serum. Through comparing the characters of the spectrum, we can judge if the blood sample is or not, and this blood analysis is a new method for the diagnosis of disease. Compared with other methods of blood measurements, the method of absorption spectrum analysis of blood serum presented in this paper, is more convenient for measurement, simpler for analysis, and easier to popularize.

  6. [Infrared absorption spectrum analysis and its application to blood].

    PubMed

    Wang, Le-xin; Zhao, Zhi-min; Yao, Hong-bing; Chen, Yu-ming; Shi, Lei; Gao, Yong

    2002-12-01

    The technology of infrared absorption spectrum is a branch of optical ment measurement technology, and the research on the application of infrared spectrum plays an important role in the development of technology of optical measurement. In this paper, the analysis technology of blood infrared absorption spectrum is presented. By comparison, the difference of the spectra between normal and abnormal blood samples was obtained. The infrared absorption spectra of normal blood sample and abnormal blood sample were detected, and the differences between the spectra are presented. And the analysis results of the infrared absorption spectra of normal whole blood, serum and hyperglycemia are presented also. All of these provide an experimental basis for the diagnosis of diseases, which is valuable for application. This technology features easy operation, convenient analysis and suitability for advanced experiment. The work offers a new way in the research on the application of infrared absorption spectrum.

  7. The Absorption Spectrum of Iodine Vapour

    ERIC Educational Resources Information Center

    Tetlow, K. S.

    1972-01-01

    A laboratory experiment is described which presents some molecular parameters of iodine molecule by studying iodine spectrum. Points out this experiment can be conducted by sixth form students in high school laboratories. (PS)

  8. The Absorption Spectrum of an Electron Solvated in Sodalite

    DTIC Science & Technology

    1992-05-15

    S. FUNDING NUMBERS The Absorption Spectrum of an Electron N00014-90-J-1159 Solvated in Sodalite C AUTHOR(S) K. Haug, V. Srdanov, G. Stucky, and H...words) We use a simple model to study the color change taking place when sodium atoms are absorbed in the zeolite sodalite . The Hamiltonian is that...the absorption spectrum on the magnitude of framework charges, the orientation of the Na 4 cluster in the sodalite cells, the localization of the

  9. The emission/absorption FE 2 spectrum of HD 45677

    NASA Technical Reports Server (NTRS)

    Stalio, R.; Selvelli, P. L.

    1981-01-01

    The complex behavior of the emission/absorption spectrum of Fe II is analyzed. The far UV spectrum is characterized almost solely by absorption lines, while, in the near UV, strong emissions are predominant. Radiative excitation from the ground to the highest levels (chi is approximately 10 eV) with re-emission in the near UV, visible and I.R. seems to be the main mechanism capable of explaining the observed spectral features.

  10. Observation of the visible absorption spectrum of H2O(+)

    NASA Technical Reports Server (NTRS)

    Das, Biman; Farley, John W.

    1991-01-01

    The water cation, H2O(+), has been studied, using laser absorption spectroscopy in a velocity-modulated discharge. It is shown that it is possible to observe the absorption spectrum of an ion that is not a terminal ion, despite the weak absorption oscillator strength, and despite the use of a relatively noisy dye laser. The relative intensities of the absorption lines have been measured to an accuracy of 13 percent. It is concluded that if the absorption cross section of a single transition can be measured absolutely, then the entire manifold will be known absolutely.

  11. Theoretical modeling of the absorption spectrum of aqueous riboflavin

    NASA Astrophysics Data System (ADS)

    Zanetti-Polzi, Laura; Aschi, Massimiliano; Daidone, Isabella; Amadei, Andrea

    2017-02-01

    In this study we report the modeling of the absorption spectrum of riboflavin in water using a hybrid quantum/classical mechanical approach, the MD-PMM methodology. By means of MD-PMM calculations, with which the effect of riboflavin internal motions and of solvent interactions on the spectroscopic properties can be explicitly taken into account, we obtain an absorption spectrum in very good agreement with the experimental spectrum. In particular, the calculated peak maxima show a consistent improvement with respect to previous computational approaches. Moreover, the calculations show that the interaction with the environment may cause a relevant recombination of the gas-phase electronic states.

  12. [Using Fourier transform to analyse differential optical absorption spectrum].

    PubMed

    Liu, Qian-Lin; Wang, Li-Shi; Huang, Xin-Jian

    2008-05-01

    According to the theory of differential optical absorption spectral technique, the differential optical absorption spectral monitoring equipment was designed. Aiming at two kinds of main pollutants, SO2 and NO2, in the atmosphere, this technique was used to monitor them. The present article puts forward the signal analysis method of Fourier transformation to process the above-mentioned two kinds of absorption spectra. The two approaches contain the removeal of noise and the fitting of the slow variety. On the frequency chart after the spectrum was transformed, the low frequency corresponded to the slow variety part and the high frequency corresponded to the noise part of the original spectrum, so through intercepting a certain frequency segment and using inverse Fourier transformation the slow variety part of the low frequency and the noise part of the high frequency of the absorption spectrum could be subtracted. After farther processing we can get a higher resolution differential absorption spectrum of the gas. According to the strength of the spectrum, we can calculate the concentration of the gas. After analysis and comparison with the conventional method, it is considered a new processing method of differential optical absorption spectral technique, and the method can fit the slow variety much better.

  13. [Anomalous absorption and a qualified far infrared spectrum].

    PubMed

    Hu, Yan-qin; Chen, Yu-jing; Li, Hui-hua; Wang, Hai-shui

    2012-02-01

    The ideal 100% line could not be obtained when the content of water vapor in the spectrometer is constant but high during the whole procedure of a far-infrared spectrum collection. This result indicates that anomalous absorption phenomenon takes place in high relative humidity atmosphere. In the present paper, the influences of the relative humidity of ambient air and spectral resolution on anomalous absorption were studied. It was found that both decreasing the water vapor content in the spectrometer and adopting low spectral resolution are effective methods to avoid anomalous absorption. Furthermore, the water vapor bands can be eliminated by "dry air and wet air titration" in the fluctuant humidity. This provides us a quick and economic method to obtain a qualified far infrared spectrum conveniently. It should be noticed that the working condition for "dry air and wet air titration" is low relative humidity to prevent water vapor abnormal absorption.

  14. Mechanochemical Tuning of Pyrene Absorption Spectrum Using Force Probes.

    PubMed

    Fernández-González, Miguel Ángel; Rivero, Daniel; García-Iriepa, Cristina; Sampedro, Diego; Frutos, Luis Manuel

    2017-02-14

    Control of absorption spectra in chromophores is a fundamental aspect of many photochemical and photophysical processes as it constitutes the first step of the global photoinduced process. Here we explore the use of mechanical forces to modulate the light absorption process. Specifically, we develop a computational formalism for determining the type of mechanical forces permitting a global tuning of the absorption spectrum. This control extends to the excitation wavelength, absorption bands overlap, and oscillator strength. The determination of these optimal forces permits us to rationally guide the design of new mechano-responsive chromophores. Pyrene has been chosen as the case study for applying these computational tools because significant absorption spectra information is available for the chromophore as well as for different strained derivatives. Additionally, pyrene presents a large flexibility, which makes it a good system to test the inclusion of force probes as the strategy to exert forces on the system.

  15. Absorption spectrum of DNA for wavelengths greater than 300 nm

    SciTech Connect

    Sutherland, J.C.; Griffin, K.P.

    1981-06-01

    Although DNA absorption at wavelengths greater than 300 nm is much weaker than that at shorter wavelengths, this absorption seems to be responsible for much of the biological damage caused by solar radiation of wavelengths less than 320 nm. Accurate measurement of the absorption spectrum of DNA above 300 nm is complicated by turbidity characteristic of concentrated solutions of DNA. We have measured the absorption spectra of DNA from calf thymus, Clostridium perfringens, Escherichia coli, Micrococcus luteus, salmon testis, and human placenta using procedures which separate optical density due to true absorption from that due to turbidity. Above 300 nm, the relative absorption of DNA increases as a function of guanine-cytosine content, presumably because the absorption of guanine is much greater than the absorption of adenine at these wavelengths. This result suggests that the photophysical processes which follow absorption of a long-wavelength photon may, on the average, differ from those induced by shorter-wavelength photons. It may also explain the lower quantum yield for the killing of cells by wavelengths above 300 nm compared to that by shorter wavelengths.

  16. Giant many-body effects in liquid ammonia absorption spectrum

    NASA Astrophysics Data System (ADS)

    Ziaei, Vafa; Bredow, Thomas

    2016-11-01

    In the present work, we accurately calculate the absorption spectrum of liquid ammonia up to 13 eV using many-body perturbation approach. The electronic bandgap of liquid NH3 is perfectly described as the combination of density functional theory, Coulomb-hole screened exchange, and G0W0 approximation to the electronic self-energy, yielding a direct gap (Γ → Γ) of 7.71 eV, fully consistent with the experimentally measured gap from photo-emission spectroscopy. With respect to the NH3 optical properties, the entire spectrum in particular the low lying first absorption band is extremely affected by electron-hole interactions, leading to a fundamental redistribution of spectral weights of the independent-particle spectrum. Three well separated but broad main peaks are identified at 7.0, 9.8, and 11.8 eV with steadily increasing intensities in excellent agreement with the experimental data. Furthermore, we observe a giant net blue-shift of the first absorption peak of about 1.4 eV from gaseous to liquid phase as the direct consequence of many-body effects, allowing the associated liquid ammonia absorption band exciton to delocalize and feel more effectively the repulsion effects imposed by the surrounding solvent shells. Further, the spectrum is insensitive to the coupling of resonant and anti-resonant contributions. Concerning electronic response structure of liquid NH3, it is most sensitive to excitations at energies lower than its electronic gap.

  17. [The study of absorption spectrum for cell substrate].

    PubMed

    Zhao, Yuan-Li; Zhang, Feng-Qiu; Ge, Xiang-Hong; Yao, Shu-Xia; Liang, Er-jun

    2004-08-01

    The authors collected the absorption spectrum of RPMI 1640 and DMEM substrates that cultivated Hela and CNE by UV-3101 spectrophotometer and analysed the absorbability of proteins in the substrate. The absorption peaks of the RPMI 1 640 culture medium that cultivated cells for different times shifted from 227 to 222 or 218 nm and from 278 to 280 nm respectively; while during growing course of cultivated cells, one of the absorption peaks of DMEM culture medium shifted from 224 nm to one near 221 nm, and the absorption peak 278 nm almost had no shift. All of these shifts show that the content of each amino acid such as tryptophan and casein has already changed. That is, during the growing course of cultivating cancer cells, the tryptophan and casein were not depleted equivalently. In the growth period of Hela and CNE, they consumed different amino acid. So they need different component proportion for amino acid.

  18. Excitonic effects and the optical absorption spectrum ofhydrogenated Si clusters

    SciTech Connect

    Rohlfing, Michael; Louie, Steven G.

    1997-10-19

    We calculate the optical absorption spectrum of hydrogen-terminated silicon clusters by solving the Bethe-Salpeter equation for the two-particle Green's function using an ab initio approach. The one-particle Green's function and the electron-hole interaction kernel are calculated within the GW approximation for the electron self-energy operator. Very large exciton binding energies are observed. Our results for the one-particle properties and the optical absorption spectra of the clusters are in very good agreement with available experimental data.

  19. Ultraviolet absorption spectrum of chlorine nitrite, ClONO

    NASA Technical Reports Server (NTRS)

    Molina, L. T.; Molina, M. J.

    1977-01-01

    The near-ultraviolet absorption spectrum of chlorine nitrite (ClONO) has been quantitatively investigated over the wavelength range 230-400 nm at 231 K. An absorption maximum was observed at 290 nm with a cross section of 1.5 by 10 to the -18th power sq cm. The calculated lifetime against photodissociation for ClONO in the atmosphere is 2 to 3 minutes. The large photolysis rate indicates that ClONO does not play a significant role in the stratosphere as a temporary holding tank for chlorine.

  20. Giant many-body effects in liquid ammonia absorption spectrum.

    PubMed

    Ziaei, Vafa; Bredow, Thomas

    2016-11-07

    In the present work, we accurately calculate the absorption spectrum of liquid ammonia up to 13 eV using many-body perturbation approach. The electronic bandgap of liquid NH3 is perfectly described as the combination of density functional theory, Coulomb-hole screened exchange, and G0W0 approximation to the electronic self-energy, yielding a direct gap (Γ → Γ) of 7.71 eV, fully consistent with the experimentally measured gap from photo-emission spectroscopy. With respect to the NH3 optical properties, the entire spectrum in particular the low lying first absorption band is extremely affected by electron-hole interactions, leading to a fundamental redistribution of spectral weights of the independent-particle spectrum. Three well separated but broad main peaks are identified at 7.0, 9.8, and 11.8 eV with steadily increasing intensities in excellent agreement with the experimental data. Furthermore, we observe a giant net blue-shift of the first absorption peak of about 1.4 eV from gaseous to liquid phase as the direct consequence of many-body effects, allowing the associated liquid ammonia absorption band exciton to delocalize and feel more effectively the repulsion effects imposed by the surrounding solvent shells. Further, the spectrum is insensitive to the coupling of resonant and anti-resonant contributions. Concerning electronic response structure of liquid NH3, it is most sensitive to excitations at energies lower than its electronic gap.

  1. Terahertz absorption spectrum of D 2O vapor

    NASA Astrophysics Data System (ADS)

    Yu, B. L.; Yang, Y.; Zeng, F.; Xin, X.; Alfano, R. R.

    2006-02-01

    The absorption spectrum of D2O vapor from 0.2 to 2.0 THz (6.7-67 cm-1) which is associated with rotational modes was measured at one atmosphere using terahertz time-domain spectroscopy (THz-TDS). The linewidth and collisional dephasing times were measured for 26 pure rotational transitions in the ground vibrational state (0 0 0). The temperature dependence of the linewidth (Δν) behaves as Δν ∼ T-3/4 and the linewidth decrease with increasing temperature is attributed to the 1/r6 force of interaction between colliding D2O molecules.

  2. Excited state absorption spectrum of chlorophyll a obtained with white-light continuum.

    PubMed

    De Boni, L; Correa, D S; Pavinatto, F J; dos Santos, D S; Mendonça, C R

    2007-04-28

    The study of excited state properties of chlorophyll a is a subject of foremost interest, given that it plays important roles in biological process and has also been proposed for applications in photonics. This work reports on the excited state absorption spectrum of chlorophyll a solution from 460 to 700 nm, obtained through the white-light continuum Z-scan technique. Saturation of absorption was observed due to the ground state depletion, induced by the white-light continuum region that is resonant with the Q band of chlorophyll a. The authors also observed reverse saturation of absorption related to the excitation from the first excited state to a higher energy level for wavelengths below 640 nm. An energy-level diagram, based on the electronic states of chlorophyll a, was employed to interpret their results, revealing that more states than the ones related to the Q and B bands participate in the excited state absorption of this molecule.

  3. Temperature dependence of the NO3 absorption spectrum

    NASA Technical Reports Server (NTRS)

    Sander, Stanley P.

    1986-01-01

    The absorption spectrum of the gas-phase NO3 radical has been studied between 220 and 700 nm by using both flash photolysis and discharge flow reactors for the production of NO3. In the flash photolysis method, cross sections at the peak of the (0,0) band at 661.9 nm were measured relative to the cross section of ClONO2 at several different wavelengths. From the best current measurements of the ClONO2 spectrum, the NO3 cross section at 661.9 nm was determined to be (2.28 + or 0.34) x 10 to the -17th sq cm/molecule at 298 K. Measurements at 230 K indicated that the cross section increases by a factor of 1.18 at the peak of the (0,0) band. The discharge flow method was used both to obtain absolute cross sections at 661.9 nm and to obtain relative absorption spectra between 300 and 700 nm at 298 and 230 K. A value of (1.83 + or - 0.27) x 10 to the -17th sq cm/molecule was obtained for sigma NO3 at 661.9 nm at 298 K. Upper limits to the NO3 cross sections were also measured between 220 and 260 nm with the discharge flow method.

  4. The energy spectrum and the optical absorption spectrum of C{sub 60} fullerene within the Hubbard model

    SciTech Connect

    Silant’ev, A. V.

    2015-10-15

    Anticommutator Green’s functions and the energy spectrum of C{sub 60} fullerene are calculated in the approximation of static fluctuations within the Hubbard model. On the basis of this spectrum, an interpretation is proposed for the experimentally observed optical absorption bands of C{sub 60} fullerene. The parameters of C{sub 60} fullerene that characterize it within the Hubbard model are calculated by the optical absorption spectrum.

  5. Vertical transition energies vs. absorption maxima: illustration with the UV absorption spectrum of ethylene.

    PubMed

    Lasorne, Benjamin; Jornet-Somoza, Joaquim; Meyer, Hans-Dieter; Lauvergnat, David; Robb, Michael A; Gatti, Fabien

    2014-02-05

    We revisit the validity of making a direct comparison between measured absorption maxima and computed vertical transition energies within 0.1 eV to calibrate an excited-state level of theory. This is illustrated on the UV absorption spectrum of ethylene for which the usual experimental values of 7.66 eV (V←N) and 7.11 eV (R(3s)←N) cannot be compared directly to the results of electronic structure calculations for two very different reasons. After validation of our level of theory against experimental data, a new experimental reference of 7.28 eV is suggested for benchmarking the Rydberg state, and the often-cited average transition energy (7.80 eV) is confirmed as a safer estimate for the valence state.

  6. Strong water absorption in the dayside emission spectrum of the planet HD 189733b.

    PubMed

    Grillmair, Carl J; Burrows, Adam; Charbonneau, David; Armus, Lee; Stauffer, John; Meadows, Victoria; van Cleve, Jeffrey; von Braun, Kaspar; Levine, Deborah

    2008-12-11

    Recent observations of the extrasolar planet HD 189733b did not reveal the presence of water in the emission spectrum of the planet. Yet models of such 'hot-Jupiter' planets predict an abundance of atmospheric water vapour. Validating and constraining these models is crucial to understanding the physics and chemistry of planetary atmospheres in extreme environments. Indications of the presence of water in the atmosphere of HD 189733b have recently been found in transmission spectra, where the planet's atmosphere selectively absorbs the light of the parent star, and in broadband photometry. Here we report the detection of strong water absorption in a high-signal-to-noise, mid-infrared emission spectrum of the planet itself. We find both a strong downturn in the flux ratio below 10 microm and discrete spectral features that are characteristic of strong absorption by water vapour. The differences between these and previous observations are significant and admit the possibility that predicted planetary-scale dynamical weather structures may alter the emission spectrum over time. Models that match the observed spectrum and the broadband photometry suggest that heat redistribution from the dayside to the nightside is weak. Reconciling this with the high nightside temperature will require a better understanding of atmospheric circulation or possible additional energy sources.

  7. [Decomposition of hemoglobin UV absorption spectrum into absorption spectra of prosthetic group and apoprotein by means of an additive model].

    PubMed

    Lavrinenko, I A; Vashanov, G A; Artyukhov, V G

    2015-01-01

    The decomposition pathways of hemoglobin UV absorption spectrum into the absorption spectra of the protein and non-protein components are proposed and substantiated by means of an additive model. We have established that the heme component has an absorption band with a maximum at λ(max) = 269.2 nm (ε = 97163) and the apoprotein component has an absorption band with a maximum at λ(max) = 278.4 nm (ε = 48669) for the wavelength range from 240.0 to 320.0 nm. An integral relative proportion of absorption for the heme fraction (78.8%) and apoprotein (21.2%) in the investigating wavelength range is defined.

  8. Interstellar absorption lines in the spectrum of Gamma Velorum

    NASA Technical Reports Server (NTRS)

    Morton, D. C.; Bhavsar, S. P.

    1979-01-01

    Copernicus scans of selected interstellar absorption lines in the UV spectrum of Gamma Vel are analyzed, together with ground-based data, to obtain column densities for various ion states of C, N, O, Na, Mg, Al, Si, P, S, Cl, Ar, Ca, Mn, Fe, and CO. N I and O I are fitted to a single empirical curve of growth with a velocity parameter (b) of 8 km/s; Mg II, Si II, P II, S II, Mn II, and Fe II are fitted to another curve with b between 3 and 9 km/s. Abundance determinations relative to H I show that: (1) C, N, P, S, and Ar are probably close to their solar values; (2) O may be depleted by about a factor of 2; (3) Mg, Al, Si, Cl, Mn, and Fe are depleted by a factor of 4 or more: (4) Al is depleted by at least a factor of 10 in the H II region; and (5) both N V and O VI are present, but not C IV. The N V/O VI ratio implies that the electron temperature in the H II region is about 275,000 K.

  9. Infrared Absorption Spectrum of Matrix-Isolated Phenanthrene

    NASA Astrophysics Data System (ADS)

    Zhang, Xu; Stanley P. Sander

    2016-10-01

    The far-to-mid Infrared absorption spectrum of phenanthrene (C14H10), one of the polycyclic aromatic hydrocarbons (PAHs), has been measured in an argon matrix at 5 K. Thirty two fundamental bands for phenanthrene have been observed; one of them is detected for the first time (v54 = 1398.0 cm-1) and eight of them are detected for the first time at temperatures below room temperature (v43 = 233.8 cm-1, v42 = 425.2 cm-1, v66 = 441.6 cm-1, v65 = 499.0 cm-1, v21 = 546.3 cm-1, v63 = 714.5 cm-1, v18 = 1033.7 cm-1 and v55 = 1362.5 cm-1). The relative intensities of these 32 bands have been measured; three ( v21, v18, v54) of which are measured for the first time and six ( v43, v42, v66, v65, v63, and v55) of which are measured for the first time at temperatures below room temperature. Our low temperature study of the vibrational bands for phenanthrene provides important information for the spectral analysis of the Composite Infrared Spectrometer (CIRS) aboard the Cassini Spacecraft.

  10. Absorption spectrum of Pb I between 1350 and 2041 A

    NASA Technical Reports Server (NTRS)

    Brown, C. M.; Tilford, S. G.; Ginter, M. L.

    1977-01-01

    The high resolution absorption spectrum of Pb I is reported between 1350 and 2041 A. Transitions are observed from the 6p2 (1/2,1/2)0, (3/2,1/2)1, and (3/2,1/2)2 levels to levels with J less than or equal to 2 associated with 6pns and 6pnd configurations. Energy levels have been determined with n(asterisk) values as high as 74. More than 500 spectral features and 370 odd parity energy levels are reported, a major part of which are new. These observations include five electric quadrupole transitions and 31 nuclear-spin-induced transitions from the Pb-207 isotope. Ionization limits of 59819.57 per cm and 73900.64 per cm have been determined for levels converging on the 6p 2P(1/2)O and 6p 2P(3/2)O levels of Pb II, respectively. An analysis of these data in terms of Lu-Fano graphical methods and multichannel quantum defect parametrization also is presented.

  11. [Analysis of UV-visible absorption spectrum on the decolorization of industrial wastewater by disinfection].

    PubMed

    Huang, Xin; Wang, Long-Yong; Gao, Nai-Yun; Li, Wei-Guo

    2012-10-01

    The UV-Visible absorption spectrum of industrial wastewater was explored to introduce a substituting method determining the color of water, and to compare the decolorization efficacy of different disinfectants. The results show that the visible absorption spectrum(350-600 nm), instead of ultraviolet absorption spectrum, should be applied to characterize the color of wastewater. There is a good correlation between the features of visible absorption spectrum and the true color of wastewater. Both ozone and chlorine dioxide has a better decolorization performance than chlorine. However, the color of chlorine dioxide itself has a negative effect on decolorization. The changes in the features of visible absorption spectrum effectively reflect the variations in the color of wastewater after disinfection.

  12. Understanding the two-photon absorption spectrum of PE2 platinum acetylide complex.

    PubMed

    Vivas, Marcelo G; De Boni, Leonardo; Cooper, Thomas M; Mendonca, Cleber R

    2014-07-31

    Herein, we report on the two-absorption cross-section spectrum of trans-Pt(PBu3)2 (C≡C-C6H4-C≡C-C6H5)2 (PE2) platinum acetylide complex employing the femtosecond wavelength-tunable Z-scan technique. The PE2 complex can be visualized as two branches containing two phenylacetylene units, each one linked by a platinum center, completely transparent in the visible region. Because of this structure, large delocalization of π-electrons allied to the strong intramolecular interaction between the branches is expected. The 2PA absorption spectrum was measured using the femtosecond wavelength-tunable Z-scan technique with low repetition rate (1 kHz), in order to obtain the 2PA spectrum without excited-state contributions. Our results reveal that PE2 in dichloromethane solution presents two 2PA allowed bands located at 570 and 710 nm, with cross section of about 320 and 45 GM, respectively. The first one is related to the strong intramolecular interaction between the molecule's branches due to the presence of platinum atom, while the second one is associated with the breaking of symmetry of the chromophore in solution due, most probably to a large twisting angle of the ligand's phenyl rings relative to the Pt core.

  13. Revealing plasma oscillation in THz spectrum from laser plasma of molecular jet.

    PubMed

    Li, Na; Bai, Ya; Miao, Tianshi; Liu, Peng; Li, Ruxin; Xu, Zhizhan

    2016-10-03

    Contribution of plasma oscillation to the broadband terahertz (THz) emission is revealed by interacting two-color (ω/2ω) laser pulses with a supersonic jet of nitrogen molecules. Temporal and spectral shifts of THz waves are observed as the plasma density varies. The former owes to the changing refractive index of the THz waves, and the latter correlates to the varying plasma frequency. Simulation of considering photocurrents, plasma oscillation and decaying plasma density explains the broadband THz spectrum and the varying THz spectrum. Plasma oscillation only contributes to THz waves at low plasma density owing to negligible plasma absorption. At the longer medium or higher density, the combining effects of plasma oscillation and absorption results in the observed low-frequency broadband THz spectra.

  14. [Gas Concentration Measurement Based on the Integral Value of Absorptance Spectrum].

    PubMed

    Liu, Hui-jun; Tao, Shao-hua; Yang, Bing-chu; Deng, Hong-gui

    2015-12-01

    The absorptance spectrum of a gas is the basis for the qualitative and quantitative analysis of the gas by the law of the Lambert-Beer. The integral value of the absorptance spectrum is an important parameter to describe the characteristics of the gas absorption. Based on the measured absorptance spectrum of a gas, we collected the required data from the database of HIT-RAN, and chose one of the spectral lines and calculated the integral value of the absorptance spectrum in the frequency domain, and then substituted the integral value into Lambert-Beer's law to obtain the concentration of the detected gas. By calculating the integral value of the absorptance spectrum we can avoid the more complicated calculation of the spectral line function and a series of standard gases for calibration, so the gas concentration measurement will be simpler and faster. We studied the changing trends of the integral values of the absorptance spectrums versus temperature. Since temperature variation would cause the corresponding variation in pressure, we studied the changing trends of the integral values of the absorptance spectrums versus both the pressure not changed with temperature and changed with the temperature variation. Based on the two cases, we found that the integral values of the absorptance spectrums both would firstly increase, then decrease, and finally stabilize with temperature increasing, but the ranges of specific changing trend were different in the two cases. In the experiments, we found that the relative errors of the integrated values of the absorptance spectrum were much higher than 1% and still increased with temperature when we only considered the change of temperature and completely ignored the pressure affected by the temperature variation, and the relative errors of the integrated values of the absorptance spectrum were almost constant at about only 1% when we considered that the pressure were affected by the temperature variation. As the integral value

  15. Understanding the Two-Photon Absorption Spectrum of PE2 Platinum Acetylide Complex

    DTIC Science & Technology

    2014-07-09

    AFRL-RX-WP-JA-2014-0188 UNDERSTANDING THE TWO-PHOTON ABSORPTION SPECTRUM OF PE2 PLATINUM ACETYLIDE COMPLEX (POSTPRINT) Thomas M...UNDERSTANDING THE TWO-PHOTON ABSORPTION SPECTRUM OF PE2 PLATINUM ACETYLIDE COMPLEX (POSTPRINT) 5a. CONTRACT NUMBER In-House 5b. GRANT NUMBER...on the two-absorption crosssection spectrum of trans-Pt(PBu3)2 (C≡C−C6H4−C≡C−C6H5)2 (PE2) platinum acetylide complex employing the femtosecond

  16. Inapplicability of small-polaron model for the explanation of infrared absorption spectrum in acetanilide.

    PubMed

    Zeković, Slobodan; Ivić, Zoran

    2009-01-01

    The applicability of small-polaron model for the interpretation of infrared absorption spectrum in acetanilide has been critically reexamined. It is shown that the energy difference between the normal and anomalous peak, calculated by means of small-polaron theory, displays pronounced temperature dependence which is in drastic contradiction with experiment. It is demonstrated that self-trapped states, which are recently suggested to explain theoretically the experimental absorption spectrum in protein, cannot cause the appearance of the peaks in absorption spectrum for acetanilide.

  17. Defining the Absorption Spectrum of the Skin After Application of a Popular Sunless Tanner, Dihydroxyacetone, Using Re ectance Photospectrometry.

    PubMed

    Graves, Michael S; Lloyd, Amanda A; Ross, E Victor

    2016-11-01

    Dihydroxyacetone (DHA) is a popular ingredient in sunless tanner and lotions. We sought to measure the absorption spectrum of hu- man skin after application of DHA. A male in his 30's applied DHA to one underarm once daily for seven days. Re ectance spectropho- tometry was performed on the treated and untreated side. The area treated with DHA revealed increased absorption in the 400-700 nm range. Compared to normal skin, the absorption spectrum of human skin after application of DHA is altered from 400-700 nm. Care should be taking with using lasers in these wavelengths on skin treated with DHA. J Drugs Dermatol. 2016;15(11):1459-1460..

  18. Invisible ink mark detection in the visible spectrum using absorption difference.

    PubMed

    Lee, Joong; Kong, Seong G; Kang, Tae-Yi; Kim, Byounghyun; Jeon, Oc-Yeub

    2014-03-01

    One of popular techniques in gambling fraud involves the use of invisible ink marks printed on the back surface of playing cards. Such covert patterns are transparent in the visible spectrum and therefore invisible to unaided human eyes. Invisible patterns can be made visible with ultraviolet (UV) illumination or a CCD camera installed with an infrared (IR) filter depending on the type of ink materials used. Cheating gamers often wear contact lenses or eyeglasses made of IR or UV filters to recognize the secret marks on the playing cards. This paper presents an image processing technique to reveal invisible ink patterns in the visible spectrum without the aid of special equipment such as UV lighting or IR filters. A printed invisible ink pattern leaves a thin coating on the surface with different refractive index for different wavelengths of light, which results in color dispersion or absorption difference. The proposed method finds the differences of color components caused by absorption difference to detect invisible ink patterns on the surface. Experiment results show that the proposed scheme is effective for both UV-active and IR-active invisible ink materials.

  19. Ultraviolet absorption spectrum of hydrogen peroxide vapor. [for atmospheric abundances

    NASA Technical Reports Server (NTRS)

    Molina, L. T.; Schinke, S. D.; Molina, M. J.

    1977-01-01

    The ultraviolet absorption cross sections of hydrogen peroxide vapor have been determined over the wavelength range 210 to 350 nm at 296 K. At the longer wavelengths, the gas phase absorptivities are significantly larger than the corresponding values in condensed phase. The atmospheric H2O2 photodissociation rate for overhead sun at the earth's surface is estimated to be about 1.3 x 10 to the -5th/sec.

  20. Cesium Absorption Spectrum Perturbed by Argon: Observation of Non-Lorentzian Wing Properties

    DTIC Science & Technology

    2012-03-01

    CESIUM ABSORPTION SPECTRUM PERTURBED BY ARGON : OBSERVATION OF NON-LORENTZIAN WING PROPERTIES THESIS Gordon E. Lott, Second Lieutenant, USAF AFIT...PERTURBED BY ARGON : OBSERVATION OF NON-LORENTZIAN WING PROPERTIES THESIS Presented to the Faculty Department of Engineering Physics Graduate School of...PUBLIC RELEASE; DISTRIBUTION UNLIMITED. AFIT / APPLPHY / ENP / 12-MOS CESIUM ABSORPTION SPECTRUM PERTURBED BY ARGON : OBSERVATION OF NON-LORENTZIAN

  1. Excited-state absorption in bacteriochlorophyll a-protein from the green photosynthetic bacterium Prosthecochloris aestuarii: Reinterpretation of the absorption difference spectrum

    SciTech Connect

    Amerongen, H. van; Struve, W.S. )

    1991-10-31

    Excited-state absorption arising from transitions between singly and doubly excited exciton components in strongly coupled photosynthetic antennae profoundly influences the absorption difference spectra observed in pump-probe spectroscopy. Model calculations of the absorption difference spectrum in the BChl a-protein complex from P. aestuarii are compared with the experimental spectrum.

  2. Diel oscillation in the optical activity of carotenoids in the absorption spectrum of Nannochloropsis.

    PubMed

    Possa, Gabriela C; Santana, Hugo; Brasil, Bruno S A F; Roncaratti, Luiz F

    2017-03-01

    In this paper we show that the absorption spectrum of the microalgae Nannochloropsis oceanica exhibits changes in response to the modulation of incident light. A model was used to analyze the contribution of different active pigments to the total absorption in the photosynthetically active radiation region and suggested consistent diel oscillations in the optical activity of carotenoids.

  3. Methane absorption variations in the spectrum of Pluto

    SciTech Connect

    Buie, M.W.; Fink, U.

    1987-06-01

    The lightcurve phases of 0.18, 0.35, 0.49, and 0.98 covered by 5600-10,500 A absolute spectrophotometry of Pluto during four nights include minimum (0.98) light and one near-maximum (0.49) light. The spectra are noted to exhibit significant methane band absorption depth variations at 6200, 7200, 7900, 8400, 8600, 8900, and 10,000 A, with the minimum absorption occurring at minimum light and thereby indicating a 30-percent change in the methane column abundance in the course of three days. An attempt is made to model this absorption strength variation with rotational phase terms of an isotropic surface distribution of methane frost and a clear layer of CH4 gas. 34 references.

  4. High resolution absorption spectrum of dianilino in the vapor phase.

    PubMed

    Bayrakçeken, Fuat

    2009-01-01

    Photophysical and photochemical properties of diradical in the first excited state is recorded for the very first time with the IR, band structure for dianilino molecule at room temperature, in the vapor phase. In this experiment high resolution absorption spectra of anilino free radical, dianilino, aniline in the vapor phase and silicon dioxide in the solid state were recorded by flash photolysis technique photographically. Silicon dioxide absorption band between 250 and 255 nm were also observed for the reaction cell, because the cell and windows of the cell material were spectrosilica grade fused quartz. And this absorption band also used as wavelength calibration for all the photoproducts formed in the reaction cell during optical pumping.

  5. Ultraviolet absorption spectrum of methylhydroperoxide vapor. [in troposphere

    NASA Technical Reports Server (NTRS)

    Molina, M. J.; Arguello, G.

    1979-01-01

    The ultraviolet absorption cross sections of methylhydroperoxide, CH3OOH, have been measured over the wavelength range 210 nm to 350 nm at 294 K. It was concluded that solar photolysis is a dominant sink for tropospheric CH3OOH. For midlatitudes the photodissociation rate was estimated for 0 deg, for 30 deg, and for 70 deg zenith angles.

  6. Hybrid nanocone forests with high absorption in full-solar spectrum for solar cell applications

    NASA Astrophysics Data System (ADS)

    Yang, Yudong; Mao, Haiyang; Xiong, Jijun; Ming, Anjie; Wang, Weibing

    2016-11-01

    In this work, hybrid nanocone forests (HNFs) with high absorption in full-solar-spectrum are fabricated based on a plasma repolymerization technique. The HNFs combine light trapping effect of the nanocone forests with surface plasmon resonance effect of the metallic nanoparticles, thus can achieve an optimized absorption larger than 80% in the full-solar spectrum (i.e. 200-2500nm). Besides, with the hybrid nanostructures, the absorption decrease around the Si bandgap width can be narrowed greatly, while the normalized utilization efficiency of solar radiation can be increased. Therefore, usage of the HNFs as a texture structure in solar cells to obtain higher conversion efficiencies is foreseeable.

  7. [Study of cholesterol concentration based on serum UV-visible absorption spectrum].

    PubMed

    Zhu, Wei-Hua; Zhao, Zhi-Min; Guo, Xin; Chen, Hui

    2009-04-01

    In the present paper, UV-visible absorption spectrum and neural network theory were used for the analysis of cholesterol concentration. Experimental investigation shows that the absorption spectrum has the following characteristics in the wave band of 350-600 nm: (1) There is a stronger absorption peak at 416 nm for the test sample with different cholesterol concentration; (2) There is a shoulder peak between 450 and 500 nm, whose central wavelength is 460 nm; (3) There is a weaker peak at 578 nm; (4) Absorption spectrums shape of different cholesterol concentration is different obviously. The absorption spectrum of serum is the synthesis result of cholesterol and other components (such as sugar), and the information is contained at each wavelength. There is no significant correlation between absorbance and cholesterol content at 416 nm, showing a random relation, so whether cholesterol content is abnormal is not determined by the absorbance peak at 416 nm. Based on the evident correlation between serum absorption spectrum and cholesterol concentration in the wave band of 455-475 nm, a neural network model was built to predict the cholesterol concentration. The correlation coefficient between predicted cholesterol content output A and objectives T reaches 0.968, which can be regarded as better prediction, and it provides a spectra test method of cholesterol concentration.

  8. The ultraviolet absorption spectrum of the quasar PKS 0405-12 and the local density of Lyman-alpha absorption systems

    NASA Technical Reports Server (NTRS)

    Bahcall, John N.; Jannuzi, Buell T.; Schneider, Donald P.; Hartig, George F.

    1993-01-01

    A sample of 32 absorption lines has been identified in the ultraviolet spectrum of the z = 0.57 quasar PKS 0405-12. Data cover the wavelength range 1190-3260 A. There are 10 extragalactic Ly-alpha absorption lines in the complete sample, all with observed equivalent widths greater than or equal to 0.40 A; three of the Ly-alpha lines have Ly-beta counterparts. The number of Ly-alpha lines observed in the spectrum of PKS 0405-12 is within 1 sigma of the number predicted on the basis of previous HST observations of 3C 273 and of H1821 + 643. Combining the HST observations of 3C 273, H1821 + 643, and PKS 0405-12, we estimate the local number density of Ly-alpha systems with rest equivalent widths larger than 0.32 A to be about 15 +/- 4 Ly-alpha lines per unit redshift. Ground-based images reveal a rich field of galaxies in the direction of PKS 0405-12, including many galaxies with the brightnesses and sizes expected if they belong to a cluster associated with the quasar. The quasar spectrum does not show any evidence for absorption at the redshift of the emission lines, indicating a covering factor of less than unity for the halos of galaxies in the cluster around PKS 0405 - 12.

  9. [Extracting THz absorption coefficient spectrum based on accurate determination of sample thickness].

    PubMed

    Li, Zhi; Zhang, Zhao-hui; Zhao, Xiao-yan; Su, Hai-xia; Yan, Fang

    2012-04-01

    Extracting absorption spectrum in THz band is one of the important aspects in THz applications. Sample's absorption coefficient has a complex nonlinear relationship with its thickness. However, as it is not convenient to measure the thickness directly, absorption spectrum is usually determined incorrectly. Based on the method proposed by Duvillaret which was used to precisely determine the thickness of LiNbO3, the approach to measuring the absorption coefficient spectra of glutamine and histidine in frequency range from 0.3 to 2.6 THz(1 THz = 10(12) Hz) was improved in this paper. In order to validate the correctness of this absorption spectrum, we designed a series of experiments to compare the linearity of absorption coefficient belonging to one kind amino acid in different concentrations. The results indicate that as agreed by Lambert-Beer's Law, absorption coefficient spectrum of amino acid from the improved algorithm performs better linearity with its concentration than that from the common algorithm, which can be the basis of quantitative analysis in further researches.

  10. The Absorption Spectrum of PKS 1756+237

    NASA Astrophysics Data System (ADS)

    Bauer, J. M.; Roth, K. C.; Jim, K. T. C.

    1998-05-01

    We are involved in a program to investigate the relationship between damped Lyalpha absorption systems and the interstellar medium of our own galaxy and nearby galaxies. This ultimately requires the proper identification of the systems responsible for the absorption so that a connection may be drawn between the absorption characteristics and the physical characteristics of the absorber, such as galaxy morphology, size, brightness, and separation from the QSO line of sight (see Jim & Roth, Kolhatkar et al., and Roth et al. also presenting here). PKS 1756+237 is a relatively bright QSO (m_V~18.0) with an emission redshift of z=1.721. There are two strong intervening absorption line systems at redshifts of 1.426 and 1.673. Both systems exhibit strong low-ionization lines, and so are believed to originate in the inner regions of galactic systems at some stage of formation. We obtained two hours of high quality HIRES spectra on the Keck 10m telescope for this QSO in May, 1997. The 6.5 km/s (0.09 Angstroms FWHM) resolution of this data is a ten-fold improvement over existing data, providing kinematic information as well as significantly improved column density measurements. Preliminary analysis of the data suggests the existence of significant Ni II abundance at z=1.67, possibly indicating a damped absorber system. The spectra cover the C II and Si II lines, enabling us to search for associated fine-structure excitation. These spectra also cover several additional low and high-ionization species from which we derive abundance and kinematic information. Images of this QSO, acquired at the UH 2.2m telescope using the QUIRC infrared and Tek2048 optical cameras with UH's tip-tilt system, show possible candidates for absorber systems.

  11. Temperature dependence of the ClONO2 UV absorption spectrum

    NASA Technical Reports Server (NTRS)

    Burkholder, James B.; Talukdar, Ranajit K.; Ravishankara, A. R.

    1994-01-01

    The temperature dependence of the ClONO2 absorption spectrum has been measured between 220 and 298 K and between 195 and 430 nm using a diode array spectrometer. The absorption cross sections were determined using both: (1) absolute pressure measurements at 296 K and (2) measurements at various temperatures relative to 296 K using a dual absorption cell arrangement. The temperature dependence of the ClONO2 absorption spectrum shows very broad structure. The amplitude of the temperature dependence relative to that at 296 K is weak at short wavelengths, less than 2% at 215 nm and 220 K, but significant at the wavelengths important in the stratosphere, about 30% at 325 nm and 220 K. Our ClONO2 absorption cross section data are in good general agreement with the previous measurements of Molina and Molina (1979).

  12. Quantitative photoacoustic measurement of tissue optical absorption spectrum aided by an optical contrast agent.

    PubMed

    Rajian, Justin Rajesh; Carson, Paul L; Wang, Xueding

    2009-03-16

    In photoacoustic imaging, the intensity of photoacoustic signal induced by optical absorption in biological tissue is proportional to light energy deposition, which is the product of the absorption coefficient and the local light fluence. Because tissue optical properties are highly dependent on the wavelength, the spectrum of the local light fluence at a target tissue beneath the sample surface is different than the spectrum of the incident light fluence. Therefore, quantifying the tissue optical absorption spectrum by using a photoacoustic technique is not feasible without the knowledge of the local light fluence. In this work, a highly accurate photoacoustic measurement of the subsurface tissue optical absorption spectrum has been achieved for the first time by introducing an extrinsic optical contrast agent with known optical properties. From the photoacoustic measurements with and without the contrast agent, a quantified measurement of the chromophore absorption spectrum can be realized in a strongly scattering medium. Experiments on micro-flow vessels containing fresh canine blood buried in phantoms and chicken breast tissues were carried out in a wavelength range from 680 nm to 950 nm. Spectroscopic photoacoustic measurements of both oxygenated and deoxygenated blood specimens presented an improved match with the references when employing this technique.

  13. The ultraviolet absorption spectrum of CO - Applications to planetary atmospheres

    NASA Technical Reports Server (NTRS)

    White, H. P.; Hua, Xin-Min; Caldwell, J.; Chen, F. Z.; Judge, D. L.; Wu, C. Y. R.

    1993-01-01

    Laboratory gas-phase photoabsorption cross sections of the CO Cameron 0-0 band and the underlying pseudocontinuum have been measured at a temperature of 147 K and pressures of about 200 mbar, conditions similar to ambient in various planetary and satellite stratospheres in the solar system. A theoretical modeling program has also been used to calculate the band's spectrum. Agreement between the theoretical and the experimental spectra is very good. Models suggest that the observations of the CO Cameron band using the Hubble Space Telescope will be straightforward for Mars, but marginal for Titan.

  14. Bilirubin calculi crushing by laser irradiation at a molecular oscillating region wavelength based on infrared absorption spectrum analysis using a free-electron laser: an experimental study.

    PubMed

    Watanabe, M; Kajiwara, H; Awazu, K; Aizawa, K

    2001-01-01

    We investigated a new laser technique of crushing bilirubin calculi, our aim being to crush calculi in isolation using a minimally invasive procedure. Infrared absorption spectrum analysis of the bilirubin calculi was conducted, revealing maximum absorption spectrum at a wavelength of the C=O stretching vibration of ester binding that exists within the molecular structure of bilirubin calcium. As an experiment to crush calculi using the free-electron laser, we set the laser at the effective irradiation wavelength of ester binding, and conducted noncontact irradiation of the bilirubin calculi. The calculi began to slowly ablate until the irradiated site had been completely obliterated after 20s of irradiation. Moreover, absorption spectrum analysis of the irradiated site, from a comparison of absorption peak ratios, revealed that absorption peak intensities decreased over time at the absorption wavelength of ester binding. These findings suggest that irradiation of molecular oscillating region wavelengths peculiar to calculi based on infrared absorption spectrum analysis results in the gradual crushing of calculi in isolation by breaking down their molecular structure.

  15. Ultraviolet absorption spectrum of chlorine peroxide, ClOOCl.

    PubMed

    Pope, Francis D; Hansen, Jaron C; Bayes, Kyle D; Friedl, Randall R; Sander, Stanley P

    2007-05-24

    The photolysis of chlorine peroxide (ClOOCl) is understood to be a key step in the destruction of polar stratospheric ozone. This study generated and purified ClOOCl in a novel fashion, which resulted in spectra with low impurity levels and high peak absorbances. The ClOOCl was generated by laser photolysis of Cl2 in the presence of ozone, or by photolysis of ozone in the presence of CF2Cl2. The product ClOOCl was collected, along with small amounts of impurities, in a trap at about -125 degrees C. Gas-phase ultraviolet spectra were recorded using a long path cell and spectrograph/diode array detector as the trap was slowly warmed. The spectrum of ClOOCl could be fit with two Gaussian-like expressions, corresponding to two different electronic transitions, having similar energies but different widths. The energies and band strengths of these two transitions compare favorably with previous ab initio calculations. The cross sections of ClOOCl at wavelengths longer than 300 nm are significantly lower than all previous measurements or estimates. These low cross sections in the photolytically active region of the solar spectrum result in a rate of photolysis of ClOOCl in the stratosphere that is much lower than currently recommended. For conditions representative of the polar vortex (solar zenith angle of 86 degrees, 20 km altitude, and O3 and temperature profiles measured in March 2000) calculated photolysis rates are a factor of 6 lower than the current JPL/NASA recommendation. This large discrepancy calls into question the completeness of present atmospheric models of polar ozone depletion.

  16. Method for improving terahertz band absorption spectrum measurement accuracy using noncontact sample thickness measurement.

    PubMed

    Li, Zhi; Zhang, Zhaohui; Zhao, Xiaoyan; Su, Haixia; Yan, Fang; Zhang, Han

    2012-07-10

    The terahertz absorption spectrum has a complex nonlinear relationship with sample thickness, which is normally measured mechanically with limited accuracy. As a result, the terahertz absorption spectrum is usually determined incorrectly. In this paper, an iterative algorithm is proposed to accurately determine sample thickness. This algorithm is independent of the initial value used and results in convergent calculations. Precision in sample thickness can be improved up to 0.1 μm. A more precise absorption spectrum can then be extracted. By comparing the proposed method with the traditional method based on mechanical thickness measurements, quantitative analysis experiments on a three-component amino acid mixture shows that the global error decreased from 0.0338 to 0.0301.

  17. Reconstruction of absolute absorption spectrum of reduced heme a in cytochrome C oxidase from bovine heart.

    PubMed

    Dyuba, A V; Vygodina, T V; Konstantinov, A A

    2013-12-01

    This paper presents a new experimental approach for determining the individual optical characteristics of reduced heme a in bovine heart cytochrome c oxidase starting from a small selective shift of the heme a absorption spectrum induced by calcium ions. The difference spectrum induced by Ca2+ corresponds actually to a first derivative (differential) of the heme a(2+) absolute absorption spectrum. Such an absolute spectrum was obtained for the mixed-valence cyanide complex of cytochrome oxidase (a(2+)a3(3+)-CN) and was subsequently used as a basis spectrum for further procession and modeling. The individual absorption spectrum of the reduced heme a in the Soret region was reconstructed as the integral of the difference spectrum induced by addition of Ca2+. The spectrum of heme a(2+) in the Soret region obtained in this way is characterized by a peak with a maximum at 447 nm and half-width of 17 nm and can be decomposed into two Gaussians with maxima at 442 and 451 nm and half-widths of ~10 nm (589 cm(-1)) corresponding to the perpendicularly oriented electronic π→π* transitions B0x and B0y in the porphyrin ring. The reconstructed spectrum in the Soret band differs significantly from the "classical" absorption spectrum of heme a(2+) originally described by Vanneste (Vanneste, W. H. (1966) Biochemistry, 65, 838-848). The differences indicate that the overall γ-band of heme a(2+) in cytochrome oxidase contains in addition to the B0x and B0y transitions extra components that are not sensitive to calcium ions, or, alternatively, that the Vanneste's spectrum of heme a(2+) contains significant contribution from heme a3(2+). The reconstructed absorption band of heme a(2+) in the α-band with maximum at 605 nm and half-width of 18 nm (850 cm(-1)) corresponds most likely to the individual Q0y transition of heme a, whereas the Q0x transition contributes only weakly to the spectrum.

  18. The UV/Vis absorption spectrum of matrix-isolated dichlorine peroxide, ClOOCl.

    PubMed

    von Hobe, Marc; Stroh, Fred; Beckers, Helmut; Benter, Thorsten; Willner, Helge

    2009-03-14

    UV/Vis absorption spectra of ClOOCl isolated in neon matrices were measured in the wavelength range 220-400 nm. The purity of the trapped samples was checked by infrared and UV/Vis matrix spectroscopy as well as low-temperature Raman spectroscopy. At wavelengths below 290 nm, the results agree with the UV spectrum recently published by Pope et al. [J. Phys. Chem. A, 2007, 111, 4322-4332]. However, the observed absorption in the long wavelength tail of the spectrum-relevant for polar stratospheric ozone loss-is substantially higher than reported by Pope et al. Our results suggest the existence of a ClOOCl electronic state manifold leading to an absorption band similar to those of the near UV spectrum of Cl(2). The differences to previous studies can be accounted for quantitatively by contributions to the reported absorption spectra caused by impurities. The observed band in the long wavelength tail is supported by several high-level ab initio calculations. However, questions arise concerning absolute values of the ClOOCl cross sections, an issue that needs to be revisited in future studies. With calculated photolysis rates based on our spectrum scaled to previous cross sections at the peak absorption, the known polar catalytic ozone-destruction cycles to a large extent account for the observed ozone depletion in the spring polar stratosphere.

  19. Complex Resonance Absorption Structure in the X-Ray Spectrum of IRAS 13349+2438

    NASA Technical Reports Server (NTRS)

    Sako, M.; Kahn, S. M.; Behar, E.; Kaastra, J. S.; Brinkman, A. C.; Boller, Th.; Puchnarewicz, E. M.; Starling, R.; Liedahl, D. A.; Clavel, J.

    2000-01-01

    The luminous infrared-loud quasar IRAS 13349+2438 was observed with the XMM - Newton Observatory as part of the Performance Verification program. The spectrum obtained by the Reflection Grating Spectrometer (RGS) exhibits broad (FWHM - 1400 km/s) absorption lines from highly ionized elements including hydrogen- and helium-like carbon, nitrogen, oxygen, and neon, and several iron L - shell ions (Fe XVII - XX). Also shown in the spectrum is the first astrophysical detection of a broad absorption feature around lambda = 16 - 17 A identified as an unresolved transition array (UTA) of 2p - 3d inner-shell absorption by iron M-shell ions in a much cooler medium; a feature that might be misidentified as an O VII edge when observed with moderate resolution spectrometers. No absorption edges are clearly detected in the spectrum. We demonstrate that the RGS spectrum of IRAS 13349+2438 exhibits absorption lines from two distinct regions, one of which is tentatively associated with the medium that produces the optical/UV reddening.

  20. The absorption spectrum of titanium between 1900 A and 2315 A

    NASA Technical Reports Server (NTRS)

    Forsberg, P.; Johansson, S.; Smith, P. L.

    1986-01-01

    The absorption spectrum of Ti I has been analyzed in the region 1900-2315 A. The list contains 219 lines, of which 64 have been identified as transitions between the ground term and terms of the odd configurations (3d + 4s)3 np (n = 4, 5). Sixteen new energy levels have been found, and three odd level values have been revised. Most of the identified Ti I lines are present in the solar spectrum.

  1. [Signal analysis and spectrum distortion correction for tunable diode laser absorption spectroscopy system].

    PubMed

    Bao, Wei-Yi; Zhu, Yong; Chen, Jun; Chen, Jun-Qing; Liang, Bo

    2011-04-01

    In the present paper, the signal of a tunable diode laser absorption spectroscopy (TDLAS) trace gas sensing system, which has a wavelength modulation with a wide range of modulation amplitudes, is studied based on Fourier analysis method. Theory explanation of spectrum distortion induced by laser intensity amplitude modulation is given. In order to rectify the spectrum distortion, a method of synchronous amplitude modulation suppression by a variable optical attenuator is proposed. To validate the method, an experimental setup is designed. Absorption spectrum measurement experiments on CO2 gas were carried out. The results show that the residual laser intensity modulation amplitude of the experimental system is reduced to -0.1% of its original value and the spectrum distortion improvement is 92% with the synchronous amplitude modulation suppression. The modulation amplitude of laser intensity can be effectively reduced and the spectrum distortion can be well corrected by using the given correction method and system. By using a variable optical attenuator in the TDLAS (tunable diode laser absorption spectroscopy) system, the dynamic range requirements of photoelectric detector, digital to analog converter, filters and other aspects of the TDLAS system are reduced. This spectrum distortion correction method can be used for online trace gas analyzing in process industry.

  2. A new class of absorption feature in Io's near-infrared spectrum

    NASA Technical Reports Server (NTRS)

    Trafton, L. M.; Lester, D. F.; Ramseyer, T. F.; Salama, F.; Sandford, S. A.; Allamandola, L. J.

    1991-01-01

    A relatively weak IR absorption feature detected at 1200 resolving power in Io at 2.1253 microns does not correspond to any gas- or solid-phase absorption expected on the basis of previously identified Io surface constituents. The source material of the feature appears to be stable and more uniformly distributed in longitude than Io's hot spots. These characteristics imply the feature's participation in a class different from those of other Io absorption spectrum features, thereby potentially serving as a major indicator of Io's atmosphere-surface composition and interactions. Results of laboratory experiments with plausible surface ices are compared with these observations.

  3. Ortho effects on the change in electronic absorption spectrum of pyridinium salts of saturated bromohydrocarbon.

    PubMed

    Song, Jin-Ling; Gong, Li-Ming; Feng, Shou-Ai; Zhao, Jiang-Hong; Zheng, Jian-Feng; Zhu, Zhen-Ping

    2009-12-01

    The quaterisation process of 1,2-dibromoethane and pyridine is in situ traced by electronic absorption spectrum. Two absorption peaks, induced by mono- and bis-pyridinium salt of 1,2-dibromoethane, appear at 429 nm and 313 nm, respectively. To explain the phenomena, several kinds of alkyl bromides with special structures were selected and compared by experimental measurement and theoretical calculation. The results indicate that for mono-pyridinium salt of 1,2-dibromoethane, the electron donor property of ortho-bromine group increases the electron cloud density of the carbon atom associated with pyridinium cation, which induces red-shift of absorption wavelength.

  4. Ab initio calculation of the electronic absorption spectrum of liquid water

    SciTech Connect

    Martiniano, Hugo F. M. C.; Galamba, Nuno; Cabral, Benedito J. Costa

    2014-04-28

    The electronic absorption spectrum of liquid water was investigated by coupling a one-body energy decomposition scheme to configurations generated by classical and Born-Oppenheimer Molecular Dynamics (BOMD). A Frenkel exciton Hamiltonian formalism was adopted and the excitation energies in the liquid phase were calculated with the equation of motion coupled cluster with single and double excitations method. Molecular dynamics configurations were generated by different approaches. Classical MD were carried out with the TIP4P-Ew and AMOEBA force fields. The BLYP and BLYP-D3 exchange-correlation functionals were used in BOMD. Theoretical and experimental results for the electronic absorption spectrum of liquid water are in good agreement. Emphasis is placed on the relationship between the structure of liquid water predicted by the different models and the electronic absorption spectrum. The theoretical gas to liquid phase blue-shift of the peak positions of the electronic absorption spectrum is in good agreement with experiment. The overall shift is determined by a competition between the O–H stretching of the water monomer in liquid water that leads to a red-shift and polarization effects that induce a blue-shift. The results illustrate the importance of coupling many-body energy decomposition schemes to molecular dynamics configurations to carry out ab initio calculations of the electronic properties in liquid phase.

  5. Ab initio calculation of the electronic absorption spectrum of liquid water.

    PubMed

    Martiniano, Hugo F M C; Galamba, Nuno; Cabral, Benedito J Costa

    2014-04-28

    The electronic absorption spectrum of liquid water was investigated by coupling a one-body energy decomposition scheme to configurations generated by classical and Born-Oppenheimer Molecular Dynamics (BOMD). A Frenkel exciton Hamiltonian formalism was adopted and the excitation energies in the liquid phase were calculated with the equation of motion coupled cluster with single and double excitations method. Molecular dynamics configurations were generated by different approaches. Classical MD were carried out with the TIP4P-Ew and AMOEBA force fields. The BLYP and BLYP-D3 exchange-correlation functionals were used in BOMD. Theoretical and experimental results for the electronic absorption spectrum of liquid water are in good agreement. Emphasis is placed on the relationship between the structure of liquid water predicted by the different models and the electronic absorption spectrum. The theoretical gas to liquid phase blue-shift of the peak positions of the electronic absorption spectrum is in good agreement with experiment. The overall shift is determined by a competition between the O-H stretching of the water monomer in liquid water that leads to a red-shift and polarization effects that induce a blue-shift. The results illustrate the importance of coupling many-body energy decomposition schemes to molecular dynamics configurations to carry out ab initio calculations of the electronic properties in liquid phase.

  6. Ab initio calculation of the electronic absorption spectrum of liquid water

    NASA Astrophysics Data System (ADS)

    Martiniano, Hugo F. M. C.; Galamba, Nuno; Cabral, Benedito J. Costa

    2014-04-01

    The electronic absorption spectrum of liquid water was investigated by coupling a one-body energy decomposition scheme to configurations generated by classical and Born-Oppenheimer Molecular Dynamics (BOMD). A Frenkel exciton Hamiltonian formalism was adopted and the excitation energies in the liquid phase were calculated with the equation of motion coupled cluster with single and double excitations method. Molecular dynamics configurations were generated by different approaches. Classical MD were carried out with the TIP4P-Ew and AMOEBA force fields. The BLYP and BLYP-D3 exchange-correlation functionals were used in BOMD. Theoretical and experimental results for the electronic absorption spectrum of liquid water are in good agreement. Emphasis is placed on the relationship between the structure of liquid water predicted by the different models and the electronic absorption spectrum. The theoretical gas to liquid phase blue-shift of the peak positions of the electronic absorption spectrum is in good agreement with experiment. The overall shift is determined by a competition between the O-H stretching of the water monomer in liquid water that leads to a red-shift and polarization effects that induce a blue-shift. The results illustrate the importance of coupling many-body energy decomposition schemes to molecular dynamics configurations to carry out ab initio calculations of the electronic properties in liquid phase.

  7. Absolute Ultraviolet Absorption Spectrum of a Criegee Intermediate CH2OO.

    PubMed

    Sheps, Leonid

    2013-12-19

    We present the time-resolved UV absorption spectrum of the B̃ ((1)A') ← X̃ ((1)A') electronic transition of formaldehyde oxide, CH2OO, produced by the reaction of CH2I radicals with O2. In contrast to its UV photodissociation action spectrum, the absorption spectrum of formaldehyde oxide extends to longer wavelengths and exhibits resolved vibrational structure on its low-energy side. Chemical kinetics measurements of its reactivity establish the identity of the absorbing species as CH2OO. Separate measurements of the initial CH2I radical concentration allow a determination of the absolute absorption cross section of CH2OO, with the value at the peak of the absorption band, 355 nm, of σabs = (3.6 ± 0.9) × 10(-17) cm(2). The difference between the absorption and action spectra likely arises from excitation to long-lived B̃ ((1)A') vibrational states that relax to lower electronic states by fluorescence or nonradiative processes, rather than by photodissociation.

  8. [Study on removing the lamp spectrum structure in differential optical absorption spectroscopy].

    PubMed

    Qu, Xiao-ying; Li, Yu-jin

    2010-11-01

    Differential optical absorption spectroscopy (DOAS) technique has been used to measure trace gases in the atmosphere by their strongly structured absorption of radiation in the UV and visible spectral range, and nowadays this technique has been widely utilized to measure trace polluted gases in the atmosphere e.g. SO2, NO2, O3, HCHO, etc. However, there exists lamp (xenon lamp or deuteriumlamp) spectrum structure in the measured band (300-700 nm) of the absorption spectra of atmosphere, which badly impacts on precision of retrieving the concentration of trace gases in the atmosphere. People home and abroad generally employ two ways to handle this problem, one is segmenting band retrieving method, another is remedial retrieving method. In the present paper, a new retrieving method to deal with this trouble is introduced. The authors used moving-window average smoothing method to obtain the slow part of the absorption spectra of atmosphere, then achieved the lamp (xenon lamp in the paper) spectrum structure in the measured band of the absorption spectra of atmosphere. The authors analyzed and retrieved the measured spectrum of the atmosphere, and the result is better than the forenamed ways. Chi-square of residuum is 2.995 x 10(-4), and this method was proved to be able to avoid shortcoming of choosing narrowband and disadvantage of discovering the new component of atmosphere in retrieving the concentration of air pollutants and measuring the air pollutants.

  9. ULTRAVIOLET ABSORPTION SPECTRUM OF NITROUS OXIDE AS FUNCTION OF TEMPERATURE AND ISOTOPIC SUBSTITUTION

    SciTech Connect

    Selwyn, G.S.; Johnston, H.S.

    1980-07-01

    The ultraviolet absorption spectra of nitrous oxide and its {sup 15}N isotopes over the wavelength range 197 to 172 nm and between 150 and 500 K show a weak continuous absorption and a pattern of diffuse banding that became pronounced at higher temperatures. The temperature dependence of the absorption spectrum results from the activation of the n{sub 2}{double_prime} bending mode. Deconvolution of the data shows that absorption by molecules in the (010) vibrational mode results in a spectrum of vibrational bands superimposed on a continuum. A weaker and nearly continuous spectrum results from the ultraviolet absorption by molecules in the (000) vibrational mode. Analysis of the structuring indicates n{sub 2}{double_prime} = (490 {+-} 10) cm{sup -1}. No rotational structure can be observed. Measurement of the n{sub 2}{double_prime} isotope shift is used to identify the quantum number of the upper state vibrational levels. Normal coordinate analysis of the excited state is used to determine a self-consistent set of molecular parameters: bond angle (115{sup o}), the values of n{sub 1}{prime} and n{sub 3}{prime} (1372 and 1761 cm{sup -1}, respectively), and the force constants of the upper state. It is suggested that the transitions observed are {sup 1}S{sup -}({sup 1}A{sup -}) {l_arrow} X- {sup 1}{sup +} and {sup 1}D {l_arrow} {tilde X} {sup 1}S{sup +}.

  10. Research on filling process of fuel and oxidant during detonation based on absorption spectrum technology

    NASA Astrophysics Data System (ADS)

    Lv, Xiao-Jing; Li, Ning; Weng, Chun-Sheng

    2014-12-01

    Research on detonation process is of great significance for the control optimization of pulse detonation engine. Based on absorption spectrum technology, the filling process of fresh fuel and oxidant during detonation is researched. As one of the most important products, H2O is selected as the target of detonation diagnosis. Fiber distributed detonation test system is designed to enable the detonation diagnosis under adverse conditions in detonation process. The test system is verified to be reliable. Laser signals at different working frequency (5Hz, 10Hz and 20Hz) are detected. Change of relative laser intensity in one detonation circle is analyzed. The duration of filling process is inferred from the change of laser intensity, which is about 100~110ms. The peak of absorption spectrum is used to present the concentration of H2O during the filling process of fresh fuel and oxidant. Absorption spectrum is calculated, and the change of absorption peak is analyzed. Duration of filling process calculated with absorption peak consisted with the result inferred from the change of relative laser intensity. The pulse detonation engine worked normally and obtained the maximum thrust at 10Hz under experiment conditions. The results are verified through H2O gas concentration monitoring during detonation.

  11. [Research on VOC concentration detection by photoelastic modulation infrared spectrum absorption method].

    PubMed

    Hu, Miao; Wang, Tai-yong; Qiao, Zhi-feng; Geng, Bo; Xiao, Xin-hua

    2011-12-01

    In order to ensure high stability and strong anti-interference ability in static interference system for qualitative and quantitative analysis of gas, a static scans interference detection system was designed based on photoelastic modulation infrared spectrum absorption system. The system consists of infrared laser, polarizer, photoelastic modulator, polarization analyzer and CCD components. By photoelastic modulator the principal refractive index of optical crystal will change cyclically by the modulation signal, producing cyclical changes in the optical path difference. With the calculation of modulation phase variation, the authors can get the function of the crystal length, the modulation cycle, and the range of optical path difference. Based on phase delay value and the energy distribution of interference pattern, the authors got the formula for the corresponding interference light intensity. The experiment used ZnSe crystal as the photoelastic modulation crystal, the polarizer uses the DOP3212 polarizer, and the detector uses the TCD5390AP array CCD. The five groups have different concentrations with three common VOC gases (formaldehyde, benzene and xylene) for detecting the concentrations of gases. The experimental results with the traditional infrared absorption were compared with the test results of photoelastic modulation infrared spectrum absorption method. The method of photoelastic modulation infrared spectrum absorption had high stability and real-time features, while the detection accuracy is better than the traditional infrared absorption method.

  12. THE VISIBILITY OF MONOCHROMATIC RADIATION AND THE ABSORPTION SPECTRUM OF VISUAL PURPLE

    PubMed Central

    Hecht, Selig; Williams, Robert E.

    1922-01-01

    1. After a consideration of the existing data and of the sources of error involved, an arrangement of apparatus, free from these errors, is described for measuring the relative energy necessary in different portions of the spectrum in order to produce a colorless sensation in the eye. 2. Following certain reasoning, it is shown that the reciprocal of this relative energy at any wave-length is proportional to the absorption coefficient of a sensitive substance in the eye. The absorption spectrum of this substance is then mapped out. 3. The curve representing the visibility of the spectrum at very low intensities has exactly the same shape as that for the visibility at high intensities involving color vision. The only difference between them is their position in the spectrum, that at high intensities being 48 µµ farther toward the red. 4. The possibility is considered that the sensitive substances responsible for the two visibility curves are identical, and reasons are developed for the failure to demonstrate optically the presence of a colored substance in the cones. The shift of the high intensity visibility curve toward the red is explained in terms of Kundt's rule for the progressive shift of the absorption maximum of a substance in solvents of increasing refractive index and density. 5. Assuming Kundt's rule, it is deduced that the absorption spectrum of visual purple as measured directly in water solution should not coincide with its position in the rods, because of the greater density and refractive index of the rods. It is then shown that, measured by the position of the visibility curve at low intensities, this shift toward the red actually occurs, and is about 7 or 8 µµ in extent. Examination of the older data consistently confirms this difference of position between the curves representing visibility at low intensities and those representing the absorption spectrum of visual purple in water solution. 6. It is therefore held as a possible hypothesis

  13. Femtosecond time-domain observation of atmospheric absorption in the near-infrared spectrum

    NASA Astrophysics Data System (ADS)

    Hammond, T. J.; Monchocé, Sylvain; Zhang, Chunmei; Brown, Graham G.; Corkum, P. B.; Villeneuve, D. M.

    2016-12-01

    As light propagates through a medium, absorption caused by electronic or rovibrational transitions is evident in the transmitted spectrum. The incident electromagnetic field polarizes the medium and the absorption is due to the imaginary part of the linear susceptibility. In the time domain, the field establishes a coherence in the medium that radiates out of phase with the initial field. This coherence can persist for tens of picoseconds in atmospheric molecules such as H2O . We propagate a few-cycle laser pulse centered at 1.8 μ m through the atmosphere and measure the long-lasting molecular coherence in the time domain by high-order harmonic cross correlation. The measured optical free-induction decay of the pulse is compared with a calculation based on the calculated rovibrational spectrum of H2O absorption.

  14. UV absorption spectrum of the C2 Criegee intermediate CH3CHOO.

    PubMed

    Smith, Mica C; Ting, Wei-Lun; Chang, Chun-Hung; Takahashi, Kaito; Boering, Kristie A; Lin, Jim Jr-Min

    2014-08-21

    The UV spectrum of CH3CHOO was measured by transient absorption in a flow cell at 295 K. The absolute absorption cross sections of CH3CHOO were measured by laser depletion in a molecular beam to be (1.06 ± 0.09) × 10(-17) cm(2) molecule(-1) at 308 nm and (9.7 ± 0.6) × 10(-18) cm(2) molecule(-1) at 352 nm. After scaling the UV spectrum of CH3CHOO to the absolute cross section at 308 nm, the peak UV cross section is (1.27 ± 0.11) × 10(-17) cm(2) molecule(-1) at 328 nm. Compared to the simplest Criegee intermediate CH2OO, the UV absorption band of CH3CHOO is similar in intensity but blue shifted by 14 nm, resulting in a 20% slower photolysis rate estimated for CH3CHOO in the atmosphere.

  15. UV absorption spectrum of the C2 Criegee intermediate CH3CHOO

    NASA Astrophysics Data System (ADS)

    Smith, Mica C.; Ting, Wei-Lun; Chang, Chun-Hung; Takahashi, Kaito; Boering, Kristie A.; Lin, Jim-Min, Jr.

    2014-08-01

    The UV spectrum of CH3CHOO was measured by transient absorption in a flow cell at 295 K. The absolute absorption cross sections of CH3CHOO were measured by laser depletion in a molecular beam to be (1.06 ± 0.09) × 10-17 cm2 molecule-1 at 308 nm and (9.7 ± 0.6) × 10-18 cm2 molecule-1 at 352 nm. After scaling the UV spectrum of CH3CHOO to the absolute cross section at 308 nm, the peak UV cross section is (1.27 ± 0.11) × 10-17 cm2 molecule-1 at 328 nm. Compared to the simplest Criegee intermediate CH2OO, the UV absorption band of CH3CHOO is similar in intensity but blue shifted by 14 nm, resulting in a 20% slower photolysis rate estimated for CH3CHOO in the atmosphere.

  16. Spectrum sensing of trace C(2)H(2) detection in differential optical absorption spectroscopy technique.

    PubMed

    Chen, Xi; Dong, Xiaopeng

    2014-09-10

    An improved algorithm for trace C(2)H(2) detection is presented in this paper. The trace concentration is accurately calculated by focusing on the absorption spectrum from the frequency domain perspective. The advantage of the absorption spectroscopy frequency domain algorithm is its anti-interference capability. First, the influence of the background noise on the minimum detectable concentration is greatly reduced. Second, the time-consuming preprocess of spectra calibration in the differential optical absorption spectroscopy technique is skipped. Experimental results showed the detection limit of 50 ppm is achieved at a lightpath length of 0.2 m. This algorithm can be used in real-time spectrum analysis with high accuracy.

  17. Azimuthal Doppler shift of absorption spectrum in optical vortex laser absorption spectroscopy

    NASA Astrophysics Data System (ADS)

    Yoshimura, Shinji; Aramaki, Mitsutoshi; Ozawa, Naoya; Terasaka, Kenichiro; Tanaka, Masayoshi; Nagaoka, Kenichi; Morisaki, Tomohiro

    2016-10-01

    Laser spectroscopy is a powerful diagnostic tool for measuring the mean flow velocity of plasma particles. We have been developing a new laser spectroscopy method utilizing an optical vortex beam, which has helical phase fronts corresponding to the phase change in the azimuthal direction. Because of this phase change, a Doppler effect is experienced even by an atom crossing the beam vertically. The additional azimuthal Doppler shift is proportional to the topological charge of optical vortex and is inversely proportional to the distance from the beam axis in which the beam intensity is vanished by destructive interference or the phase singularity. In order to detect the azimuthal Doppler shift, we have performed a laser absorption spectroscopy experiment with the linear ECR plasma device HYPER-I. Since the azimuthal Doppler shift depends on a position in the beam cross section, the absorption spectra at various positions were reconstructed from the transmitted beam intensity measured by a beam profiler. We have observed a clear spatial dependence of the Doppler shift, which qualitatively agreed with theory. Detailed experimental results, as well as remaining issues and future prospect, will be discussed at the meeting. This study was partially supported by JAPS KAKENHI Grand Numbers 15K05365 and 25287152.

  18. [Effects of LED spectrum combinations on the absorption of mineral elements of hydroponic lettuce].

    PubMed

    Chen, Xiao-Li; Guo, Wen-Zhong; Xue, Xu-Zhang; Mmanake Beauty, Morewane

    2014-05-01

    Lettuce (Lactuca sativa) was hydroponically cultured in a completely enclosed plant factory, in which spectrum proportion-adjustable LED panels were used as sole light source for plant growth. Absorption and content of eleven mineral elements such as K, P, Ca, Mg, Na, Fe, Mn, Zn, Cu, B and Mo in Lactuca sativa under different spectral component conditions were studied by ICP -AES technology. The results showed that: (1) Single or combined spectrums corresponding to the absorbing peaks of chlorophyll a and b (450, 660 nm) could enhance the absorbing ability of roots especially for mineral elements Na, Fe, Mn, Cu and Mo, the single red spectrum had the most significant promoting effect under which contents of those four elements were respectively 7. 8, 4. 2, 4. 0 and 3. 7 times more than that under FL; (2) Absorption of K and B was the highest under FL which was 10. 309 mg g-1 and 32. 6 microg g-1 while the values decreased significantly under single or combined spectrum of red and blue; (3) Plants grown under single blue spectrum had the lowest absorption of Ca and Mg which respectively decreased by 35% and 33% than FL; (4) Lettuce grown under the spectrum combination of 30% blue and 70% red had the highest accumulations of biomass while those grown under 20% blue and 80% red had the highest accumulations of the following seven elements Ca, Mg, Na, Fe, Mn, Zn and B. The results provided theoretical basis for adjusting nutrient solution formula and selecting light spectrum of hydroponic lettuce.

  19. The widetilde{A}←widetilde{X} ABSORPTION SPECTRUM OF 2-NITROOXYBUTYL PEROXY RADICAL

    NASA Astrophysics Data System (ADS)

    Eddingsaas, Nathan; Takematsu, Kana; Okumura, Mitchio

    2009-06-01

    The nitrate radical is an important atmospheric oxidant in the nighttime sky. Nitrate radicals react by addition to alkenes, and in the presence of oxygen form nitrooxyalkyl peroxy radicals. The peroxy radical formed from the reaction of 2-butene, nitrate radical, and oxygen was detected by cavity ringdown spectroscopy (CRDS) via its widetilde{A}←widetilde{X} electronic absorption spectrum. The widetilde{A}←widetilde{X} electronic transition is a bound-bound transition with enough structure to distinguish between different peroxy radicals as well as different conformers of the same peroxy radical. Two conformers of the nitrooxybutyl peroxy radical have been observed; the absorption features are red shifted from the same absorption features of sec-butyl peroxy radical. Calculations on the structure of nitrooxyalkyl peroxy radicals and general trends of the position of the widetilde{A}←widetilde{X} absorption transitions have also been performed and compared to those of unsubstituted peroxy radicals.

  20. Semiclassical on-the-fly computation of the S(0)-->S(1) absorption spectrum of formaldehyde.

    PubMed

    Tatchen, Jörg; Pollak, Eli

    2009-01-28

    The anharmonic S(0)-->S(1) vibronic absorption spectrum of the formaldehyde molecule is computed on the fly using semiclassical dynamics. This first example of an on-the-fly semiclassical computation of a vibronic spectrum was achieved using a unit prefactor modified frozen Gaussian semiclassical propagator for the excited state. A sample of 6000 trajectories sufficed for obtaining a converged spectrum, which is in reasonable agreement with experiment. Similar agreement is not obtained when using a harmonic approximation for the spectrum, demonstrating the need for a full anharmonic computation. This first example provides a resolution of approximately 100 cm(-1). Potential ways of improving the methodology and obtaining higher resolution and accuracy are discussed.

  1. The UV absorption spectrum of the simplest Criegee intermediate CH2OO.

    PubMed

    Ting, Wei-Lun; Chen, Ying-Hsuan; Chao, Wen; Smith, Mica C; Lin, Jim Jr-Min

    2014-06-14

    SO2 scavenging and self-reaction of CH2OO were utilized for the decay of CH2OO to extract the absorption spectrum of CH2OO under bulk conditions. Absolute absorption cross sections of CH2OO at 308.4 and 351.8 nm were obtained from laser-depletion measurements in a jet-cooled molecular beam. The peak cross section is (1.23 ± 0.18) × 10(-17) cm(2) at 340 nm.

  2. Excitonic Effects and the Optical Absorption Spectrum of Hydrogenated Si Clusters

    SciTech Connect

    Rohlfing, M.; Louie, S.G. |

    1998-04-01

    We calculate the optical absorption spectrum of hydrogen-terminated silicon clusters by solving the Bethe-Salpeter equation for the two-particle Green{close_quote}s function using an {ital ab initio} approach. The one-particle Green{close_quote}s function and the electron-hole interaction kernel are calculated within the GW approximation for the electron self-energy operator. Very large exciton binding energies are observed. Our results for the one-particle properties and the optical absorption spectra of the clusters are in very good agreement with available experimental data. {copyright} {ital 1998} {ital The American Physical Society}

  3. The exciton absorption spectrum of thin CuPb3Br7 superionic conductor films

    NASA Astrophysics Data System (ADS)

    Yunakova, O. N.; Yunakov, N. N.; Kovalenko, E. N.; Kovalenko, V. V.

    2016-09-01

    A study of the absorption spectrum of thin CuPb2Br7 films in the 2-6 eV spectral and 90-500 K temperature ranges. It is shown that the exciton spectrum of the compound is associated with transitions in the lead ion. The temperature dependence of the spectral position and half-width of the low-frequency exciton band contains features associated with phase transitions γ → β (Tc1 = 159 K) and β → α (Tc2 = 434 K) and the disordering of the cation sublattice of the compound in the transition to the superionic state.

  4. Integration of Semiconducting Sulfides for Full-Spectrum Solar Energy Absorption and Efficient Charge Separation.

    PubMed

    Zhuang, Tao-Tao; Liu, Yan; Li, Yi; Zhao, Yuan; Wu, Liang; Jiang, Jun; Yu, Shu-Hong

    2016-05-23

    The full harvest of solar energy by semiconductors requires a material that simultaneously absorbs across the whole solar spectrum and collects photogenerated electrons and holes separately. The stepwise integration of three semiconducting sulfides, namely ZnS, CdS, and Cu2-x S, into a single nanocrystal, led to a unique ternary multi-node sheath ZnS-CdS-Cu2-x S heteronanorod for full-spectrum solar energy absorption. Localized surface plasmon resonance (LSPR) in the nonstoichiometric copper sulfide nanostructures enables effective NIR absorption. More significantly, the construction of pn heterojunctions between Cu2-x S and CdS leads to staggered gaps, as confirmed by first-principles simulations. This band alignment causes effective electron-hole separation in the ternary system and hence enables efficient solar energy conversion.

  5. Absorption line profiles in a companion spectrum of a mass losing cool supergiant

    NASA Technical Reports Server (NTRS)

    Rodrigues, Liliya L.; Boehm-Vitense, Erika

    1990-01-01

    Cool star winds can best be observed in resonance absorption lines seen in the spectrum of a hot companion, due to the wind passing in front of the blue star. We calculated absorption line profiles that would be seen in the ultraviolet part of the blue companion spectrum. Line profiles are derived for different radial dependences of the cool star wind and for different orbital phases of the binary. Bowen and Wilson find theoretically that stellar pulsations drive mass loss. We therefore apply our calculations to the Cepheid binary S Muscae which has a B5V companion. We find an upper limit for the Cepheid mass loss of M less than or equal to 7 x 10(exp -10) solar mass per year provided that the stellar wind of the companion does not influence the Cepheid wind at large distances.

  6. Collision-induced absorption in the far infrared spectrum of Titan

    NASA Technical Reports Server (NTRS)

    Hunt, J. L.; Poll, J. D.; Goorvitch, D.; Tipping, R. H.

    1983-01-01

    The effects of collision-induced absorption on the far infrared spectrum of Titan have been investigated. After a review of the procedure for the theoretical calculation of the N2 translation-rotational spectrum, new results for the temperature range o 70 to 120 K are reported. These are used as input data for a simple atmospheric model in order to compute the far infrared radiance, brightness temperature, and specral limb function. This source of opacity alone is not capable of explaining the Voyager results. When the collision-induced methane is included, the results are in closer agreement in the range between 200 and 300/cm, suggesting that a more complete treatment of collision-induced absorption including particularly CH4-N2, N2-H2, and H2-H2 results, may provide sufficient opacity to reduce or obviate the need for opacities due to clouds or aerosols in order to explain the observed spectra.

  7. Degenerate two-photon absorption in all-trans retinal: nonlinear spectrum and theoretical calculations.

    PubMed

    Vivas, M G; Silva, D L; Misoguti, L; Zaleśny, R; Bartkowiak, W; Mendonca, C R

    2010-03-18

    In this work we investigate the degenerate two-photon absorption spectrum of all-trans retinal in ethanol employing the Z-scan technique with femtosecond pulses. The two-photon absorption (2PA) spectrum presents a monotonous increase as the excitation wavelength approaches the one-photon absorption band and a peak at 790 nm. We attribute the 2PA band to the mixing of states (1)B(u)(+)-like and |S(1)>, which are strongly allowed by one- and two-photon, respectively. We modeled the 2PA spectrum by using the sum-over-states approach and obtained spectroscopic parameters of the electronic transitions to |S(1)>, |S(2)> ("(1)B(u)(+)"), |S(3)>, and |S(4)> singlet-excited states. The results were compared with theoretical predictions of one- and two-photon transition calculations using the response functions formalism within the density functional theory framework with the aid of the CAM-B3LYP functional.

  8. THE SURPRISING ABSENCE OF ABSORPTION IN THE FAR-ULTRAVIOLET SPECTRUM OF Mrk 231

    SciTech Connect

    Veilleux, S.; Trippe, M.; Krug, H.; Hamann, F.; Rupke, D. S. N.; Tripp, T. M.; Netzer, H.; Lutz, D.; Genzel, R.; Sturm, E.; Tacconi, L.; Sembach, K. R.; Teng, S. H.; Maiolino, R. E-mail: veilleux@astro.umd.edu

    2013-02-10

    Mrk 231, the nearest (z = 0.0422) quasar, hosts both a galactic-scale wind and a nuclear-scale iron low-ionization broad absorption line (FeLoBAL) outflow. We recently obtained a far-ultraviolet (FUV) spectrum of this object covering {approx}1150-1470 A with the Cosmic Origins Spectrograph on board the Hubble Space Telescope. This spectrum is highly peculiar, highlighted by the presence of faint ({approx}<2% of predictions based on H{alpha}), broad ({approx}>10,000 km s{sup -1} at the base), and highly blueshifted (centroid at {approx} -3500 km s{sup -1}) Ly{alpha} emission. The FUV continuum emission is slightly declining at shorter wavelengths (consistent with F {sub {lambda}}{proportional_to}{lambda}{sup 1.7}) and does not show the presence of any obvious photospheric or wind stellar features. Surprisingly, the FUV spectrum also does not show any unambiguous broad absorption features. It thus appears to be dominated by the AGN, rather than hot stars, and virtually unfiltered by the dusty FeLoBAL screen. The observed Ly{alpha} emission is best explained if it is produced in the outflowing BAL cloud system, while the Balmer lines arise primarily from the standard broad emission line region seen through the dusty (A{sub V} {approx} 7 mag) broad absorption line region. Two possible geometric models are discussed in the context of these new results.

  9. The Surprising Absence of Absorption in the Far-ultraviolet Spectrum of Mrk 231

    NASA Technical Reports Server (NTRS)

    Veilleux, S.; Trippe, M.; Hamann, F.; Rupke, D. S. N.; Tripp, T. M.; Netzer, H.; Lutz, D.; Sembach, K. R.; Krug, H.; Teng, Stacy H.; Genzel, R.; Maiolino, R.; Sturm, E.; Tacconi, L.

    2013-01-01

    Mrk 231, the nearest (z = 0.0422) quasar, hosts both a galactic-scale wind and a nuclear-scale iron low-ionization broad absorption line (FeLoBAL) outflow. We recently obtained a far-ultraviolet (FUV) spectrum of this object covering approx. 1150-1470A with the Cosmic Origins Spectrograph on board the Hubble Space Telescope. This spectrum is highly peculiar, highlighted by the presence of faint (< or approx.2% of predictions based on H(alpha)), broad (> or approx.10,000 km/s at the base), and highly blueshifted (centroid at approx. 3500 km/s) Ly(aplpha) emission. The FUV continuum emission is slightly declining at shorter wavelengths (consistent with F(sub lambda) Alpha Lambda(sup 1.7)) and does not show the presence of any obvious photospheric or wind stellar features. Surprisingly, the FUV spectrum also does not show any unambiguous broad absorption features. It thus appears to be dominated by the AGN, rather than hot stars, and virtually unfiltered by the dusty FeLoBAL screen. The observed Ly(alpha) emission is best explained if it is produced in the outflowing BAL cloud system, while the Balmer lines arise primarily from the standard broad emission line region seen through the dusty (Av approx. 7 mag) broad absorption line region. Two possible geometric models are discussed in the context of these new results.

  10. Nonlinear Correction to Absorption Spectrum under Irradiation of Microwave Field in Conventional BCS Superconductors

    NASA Astrophysics Data System (ADS)

    Jujo, Takanobu

    2017-02-01

    We investigate the absorption spectrum of s-wave superconductors under microwave pump field irradiation. The third-order response function is calculated in the dirty limit with the electron-phonon interaction included at finite temperatures. We find that the nonlinear correction to the linear absorption shows peculiar behavior when the pump field frequency is smaller than the superconducting gap. At finite temperatures, a negative nonlinear correction exists, which is caused by thermally excited quasiparticles. The vertex correction by impurity scattering is found to contain a dissipation mechanism by inelastic scattering (interaction between electrons and acoustic phonons) or nonlocality. We need this mechanism to obtain finite absorption in a nonequilibrium stationary state under a monochromatic external field. Although this term originates from the deformation of a one-particle state, there is also a final-state interaction (the amplitude mode). The latter term represents two-photon excitation and is almost independent of temperature.

  11. H i Absorption in the Steep-Spectrum Superluminal Quasar 3C 216.

    PubMed

    Pihlström; Vermeulen; Taylor; Conway

    1999-11-01

    The search for H i absorption in strong compact steep-spectrum sources is a natural way to probe the neutral gas contents in young radio sources. In turn, this may provide information about the evolution of powerful radio sources. The recently improved capabilities of the Westerbork Synthesis Radio Telescope have made it possible to detect a 0.31% (19 mJy) deep neutral atomic hydrogen absorption line associated with the steep-spectrum superluminal quasar 3C 216. The redshift (z=0.67) of the source shifts the frequency of the 21 cm line down to the ultra-high-frequency (UHF) band (850 MHz). The exact location of the H i-absorbing gas remains to be determined by spectral line VLBI observations at 850 MHz. We cannot exclude that the gas might be extended on galactic scales, but we think it is more likely to be located in the central kiloparsec. Constraints from the lack of X-ray absorption probably rule out obscuration of the core region, and we argue that the most plausible site for the H i absorption is in the jet-cloud interaction observed in this source.

  12. The second derivative electronic absorption spectrum of cytochrome c oxidase in the Soret region.

    PubMed

    Horvath, M P; Copeland, R A; Makinen, M W

    1999-09-01

    The electronic absorption spectrum of solubilized beef heart cytochrome c oxidase was analyzed in the 400-500 nm region to identify the origin of doublet features appearing in the second derivative spectrum associated with ferrocytochrome a. This doublet, centered near 22,600 cm(-1), was observed in the direct absorption spectrum of the a(2+)a(3)(3+).HCOO(-) form of the enzyme at cryogenic temperatures. Since evidence for this doublet at room temperature is obtained only on the basis of the second derivative spectrum, a novel mathematical approach was developed to analyze the resolving power of second derivative spectroscopy as a function of parameterization of spectral data. Within the mathematical limits defined for resolving spectral features, it was demonstrated that the integrated intensity of the doublet feature near 450 nm associated with ferrocytochrome a is independent of the ligand and oxidation state of cytochrome a(3). Furthermore, the doublet features, also observed in cytochrome c oxidase from Paracoccus denitrificans, were similarly associated with the heme A component and were correspondingly independent of the ligand and oxidation state of the heme A(3) chromophore. The doublet features are attributed to lifting of the degeneracy of the x and y polarized components of the B state of the heme A chromophore associated with the Soret transition.

  13. Ultraviolet Absorption Spectrum of Malonaldehyde in Water Is Dominated by Solvent-Stabilized Conformations

    SciTech Connect

    Xu, Xuefei; Zheng, Jingjing; Truhlar, Donald G.

    2015-07-01

    Free energy calculations for eight enol isomers of malonaldehyde (MA) and simulation of the ultraviolet (UV) absorption spectrum in both the gas phase and water (pH = 3, where the molecule exists in neutral undeprotonated form) show that in water the two s-trans nonchelated enol conformers of MA become thermodynamically more stable than the internally hydrogen-bonded (“chelated enol”) conformer (CE). The pure CE conformer in water has a slightly red-shifted UV spectrum with respect to that in the gas phase, but the blue-shifted spectrum observed in water at pH 3 is dominated by solvent-stabilized conformations that have negligible populations in the gas phase. Density functional calculations with the solvation model based on density (SMD) and an ensemble-averaged vertical excitation model explain the experimental observations in detail.

  14. Ultraviolet Absorption Spectrum of Malonaldehyde in Water Is Dominated by Solvent-Stabilized Conformations.

    PubMed

    Xu, Xuefei; Zheng, Jingjing; Truhlar, Donald G

    2015-07-01

    Free energy calculations for eight enol isomers of malonaldehyde (MA) and simulation of the ultraviolet (UV) absorption spectrum in both the gas phase and water (pH = 3, where the molecule exists in neutral undeprotonated form) show that in water the two s-trans nonchelated enol conformers of MA become thermodynamically more stable than the internally hydrogen-bonded ("chelated enol") conformer (CE). The pure CE conformer in water has a slightly red-shifted UV spectrum with respect to that in the gas phase, but the blue-shifted spectrum observed in water at pH 3 is dominated by solvent-stabilized conformations that have negligible populations in the gas phase. Density functional calculations with the solvation model based on density (SMD) and an ensemble-averaged vertical excitation model explain the experimental observations in detail.

  15. The spectral variability of the GHZ-Peaked spectrum radio source PKS 1718-649 and a comparison of absorption models

    SciTech Connect

    Tingay, S. J.; Macquart, J.-P.; Wayth, R. B.; Trott, C. M.; Emrich, D.; Collier, J. D.; Wong, G. F.; Rees, G.; Stevens, J.; Carretti, E.; Callingham, J. R.; Gaensler, B. M.; McKinley, B.; Briggs, F.; Bernardi, G.; Bowman, J. D.; Cappallo, R. J.; Corey, B. E.; Deshpande, A. A.; Goeke, R.; and others

    2015-02-01

    Using the new wideband capabilities of the ATCA, we obtain spectra for PKS 1718-649, a well-known gigahertz-peaked spectrum radio source. The observations, between approximately 1 and 10 GHz over 3 epochs spanning approximately 21 months, reveal variability both above the spectral peak at ∼3 GHz and below the peak. The combination of the low- and high-frequency variability cannot be easily explained using a single absorption mechanism, such as free–free absorption or synchrotron self-absorption. We find that the PKS 1718-649 spectrum and its variability are best explained by variations in the free–free optical depth on our line of sight to the radio source at low frequencies (below the spectral peak) and the adiabatic expansion of the radio source itself at high frequencies (above the spectral peak). The optical depth variations are found to be plausible when X-ray continuum absorption variability seen in samples of active galactic nuclei is considered. We find that the cause of the peaked spectrum in PKS 1718-649 is most likely due to free–free absorption. In agreement with previous studies, we find that the spectrum at each epoch of observation is best fit by a free–free absorption model characterized by a power-law distribution of free–free absorbing clouds. This agreement is extended to frequencies below the 1 GHz lower limit of the ATCA by considering new observations with Parkes at 725 MHz and 199 MHz observations with the newly operational Murchison Widefield Array. These lower frequency observations argue against families of absorption models (both free–free and synchrotron self-absorption) that are based on simple homogenous structures.

  16. Bulk entanglement spectrum reveals quantum criticality within a topological state.

    PubMed

    Hsieh, Timothy H; Fu, Liang

    2014-09-05

    A quantum phase transition is usually achieved by tuning physical parameters in a Hamiltonian at zero temperature. Here, we show that the ground state of a topological phase itself encodes critical properties of its transition to a trivial phase. To extract this information, we introduce an extensive partition of the system into two subsystems both of which extend throughout the bulk in all directions. The resulting bulk entanglement spectrum has a low-lying part that resembles the excitation spectrum of a bulk Hamiltonian, which allows us to probe a topological phase transition from a single wave function by tuning either the geometry of the partition or the entanglement temperature. As an example, this remarkable correspondence between the topological phase transition and the entanglement criticality is rigorously established for integer quantum Hall states.

  17. Multiscale structure of time series revealed by the monotony spectrum

    NASA Astrophysics Data System (ADS)

    Vamoş, Cǎlin

    2017-03-01

    Observation of complex systems produces time series with specific dynamics at different time scales. The majority of the existing numerical methods for multiscale analysis first decompose the time series into several simpler components and the multiscale structure is given by the properties of their components. We present a numerical method which describes the multiscale structure of arbitrary time series without decomposing them. It is based on the monotony spectrum defined as the variation of the mean amplitude of the monotonic segments with respect to the mean local time scale during successive averagings of the time series, the local time scales being the durations of the monotonic segments. The maxima of the monotony spectrum indicate the time scales which dominate the variations of the time series. We show that the monotony spectrum can correctly analyze a diversity of artificial time series and can discriminate the existence of deterministic variations at large time scales from the random fluctuations. As an application we analyze the multifractal structure of some hydrological time series.

  18. The ultraviolet absorption spectrum of the quasar H1821+643 (z = 0.297)

    NASA Technical Reports Server (NTRS)

    Bahcall, John N.; Jannuzi, Buell T.; Schneider, Donald P.; Hartig, George F.; Green, Richard F.

    1992-01-01

    High resolution UV observations of the nearby luminous quasar H1821+643 are reported. A complete sample of 38 absorption lines has been constructed. There are five strong extragalactic Ly-alpha absorption lines in the spectrum, all with observed equivalent widths greater than 0.45 A. The local number density of Ly-alpha systems with rest equivalent widths larger than 0.32 A is estimated to be 13 +/- 5 Ly-alpha lines per unit redshift. Some of the Ly-alpha systems with redshifts significantly different from the quasar appear to be associated with galaxies or with clusters of galaxies. Two of the Ly-alpha lines have the same redshift within 400 km/s as that of an emission-line galaxy located at a projected separation from the quasar of about 90 kpc. One of the Ly-alpha systems in H1821+643 occurs at an a absorption redshift approximately equal to the emission-line redshift of the quasar and is accompanied by absorption from the C IV and of VI doublets; this is an example of associated absorption for large-redshift quasars.

  19. UV absorption spectrum of the C2 Criegee intermediate CH{sub 3}CHOO

    SciTech Connect

    Smith, Mica C.; Ting, Wei-Lun; Chang, Chun-Hung; Takahashi, Kaito; Boering, Kristie A.; Lin, Jim Jr-Min

    2014-08-21

    The UV spectrum of CH{sub 3}CHOO was measured by transient absorption in a flow cell at 295 K. The absolute absorption cross sections of CH{sub 3}CHOO were measured by laser depletion in a molecular beam to be (1.06 ± 0.09) × 10{sup −17} cm{sup 2} molecule{sup −1} at 308 nm and (9.7 ± 0.6) × 10{sup −18} cm{sup 2} molecule{sup −1} at 352 nm. After scaling the UV spectrum of CH{sub 3}CHOO to the absolute cross section at 308 nm, the peak UV cross section is (1.27 ± 0.11) × 10{sup −17} cm{sup 2} molecule{sup −1} at 328 nm. Compared to the simplest Criegee intermediate CH{sub 2}OO, the UV absorption band of CH{sub 3}CHOO is similar in intensity but blue shifted by 14 nm, resulting in a 20% slower photolysis rate estimated for CH{sub 3}CHOO in the atmosphere.

  20. Two-Photon Absorption Spectrum of a Single Crystal Cyanine-like Dye.

    PubMed

    Hu, Honghua; Fishman, Dmitry A; Gerasov, Andrey O; Przhonska, Olga V; Webster, Scott; Padilha, Lazaro A; Peceli, Davorin; Shandura, Mykola; Kovtun, Yuriy P; Kachkovski, Alexey D; Nayyar, Iffat H; Masunov, Artëm E; Tongwa, Paul; Timofeeva, Tatiana V; Hagan, David J; Van Stryland, Eric W

    2012-05-03

    The two-photon absorption (2PA) spectrum of an organic single crystal is reported. The crystal is grown by self-nucleation of a subsaturated hot solution of acetonitrile, and is composed of an asymmetrical donor-π-acceptor cyanine-like dye molecule. To our knowledge, this is the first report of the 2PA spectrum of single crystals made from a cyanine-like dye. The linear and nonlinear properties of the single crystalline material are investigated and compared with the molecular properties of a toluene solution of its monomeric form. The maximum polarization-dependent 2PA coefficient of the single crystal is 52 ± 9 cm/GW, which is more than twice as large as that for the inorganic semiconductor CdTe with a similar absorption edge. The optical properties, linear and nonlinear, are strongly dependent upon incident polarization due to anisotropic molecular packing. X-ray diffraction analysis shows π-stacking dimers formation in the crystal, similar to H-aggregates. Quantum chemical calculations demonstrate that this dimerization leads to the splitting of the energy bands and the appearance of new red-shifted 2PA bands when compared to the solution of monomers. This trend is opposite to the blue shift in the linear absorption spectra upon H-aggregation.

  1. Infrared absorption spectrum of the simplest deuterated Criegee intermediate CD2OO.

    PubMed

    Huang, Yu-Hsuan; Nishimura, Yoshifumi; Witek, Henryk A; Lee, Yuan-Pern

    2016-07-28

    We report a transient infrared (IR) absorption spectrum of the simplest deuterated Criegee intermediate CD2OO recorded using a step-scan Fourier-transform spectrometer coupled with a multipass absorption cell. CD2OO was produced from photolysis of flowing mixtures of CD2I2, N2, and O2 (13 or 87 Torr) with laser light at 308 nm. The recorded spectrum shows close structural similarity with the spectrum of CH2OO reported previously [Y.-T. Su et al., Science 340, 174 (2013)]. The four bands observed at 852, 1017, 1054, and 1318 cm(-1) are assigned to the OO stretching mode, two distinct in-plane OCD bending modes, and the CO stretching mode of CD2OO, respectively, according to vibrational wavenumbers, IR intensities, rotational contours, and deuterium-isotopic shifts predicted with extensive quantum-chemical calculations. The CO-stretching mode of CD2OO at 1318 cm(-1) is blue shifted from the corresponding band of CH2OO at 1286 cm(-1); this can be explained by a mechanism based on mode mixing and isotope substitution. A band near 936 cm(-1), observed only at higher pressure (87 Torr), is tentatively assigned to the CD2 wagging mode of CD2IOO.

  2. Infrared absorption spectrum of the simplest deuterated Criegee intermediate CD2OO

    NASA Astrophysics Data System (ADS)

    Huang, Yu-Hsuan; Nishimura, Yoshifumi; Witek, Henryk A.; Lee, Yuan-Pern

    2016-07-01

    We report a transient infrared (IR) absorption spectrum of the simplest deuterated Criegee intermediate CD2OO recorded using a step-scan Fourier-transform spectrometer coupled with a multipass absorption cell. CD2OO was produced from photolysis of flowing mixtures of CD2I2, N2, and O2 (13 or 87 Torr) with laser light at 308 nm. The recorded spectrum shows close structural similarity with the spectrum of CH2OO reported previously [Y.-T. Su et al., Science 340, 174 (2013)]. The four bands observed at 852, 1017, 1054, and 1318 cm-1 are assigned to the OO stretching mode, two distinct in-plane OCD bending modes, and the CO stretching mode of CD2OO, respectively, according to vibrational wavenumbers, IR intensities, rotational contours, and deuterium-isotopic shifts predicted with extensive quantum-chemical calculations. The CO-stretching mode of CD2OO at 1318 cm-1 is blue shifted from the corresponding band of CH2OO at 1286 cm-1; this can be explained by a mechanism based on mode mixing and isotope substitution. A band near 936 cm-1, observed only at higher pressure (87 Torr), is tentatively assigned to the CD2 wagging mode of CD2IOO.

  3. Surprises from a Deep ASCA Spectrum of the Broad Absorption Line Quasar PHL 5200

    NASA Technical Reports Server (NTRS)

    Mathur, Smita; Matt, G.; Green, P. J.; Elvis, M.; Singh, K. P.

    2002-01-01

    We present a deep (approx. 85 ks) ASCA observation of the prototype broad absorption line quasar (BALQSO) PHL 5200. This is the best X-ray spectrum of a BALQSO yet. We find the following: (1) The source is not intrinsically X-ray weak. (2) The line-of-sight absorption is very strong, with N(sub H) = 5 x 10(exp 23)/sq cm. (3) The absorber does not cover the source completely; the covering fraction is approx. 90%. This is consistent with the large optical polarization observed in this source, implying multiple lines of sight. The most surprising result of this observation is that (4) the spectrum of this BALQSO is not exactly similar to other radio-quiet quasars. The hard X-ray spectrum of PHL 5200 is steep, with the power-law spectral index alpha approx. 1.5. This is similar to the steepest hard X-ray slopes observed so far. At low redshifts, such steep slopes are observed in narrow-line Seyfert 1 (NLS1) galaxies, believed to be accreting at a high Eddington rate. This observation strengthens the analogy between BALQSOs and NLS1 galaxies and supports the hypothesis that BALQSOs represent an early evolutionary state of quasars. It is well accepted that the orientation to the line of sight determines the appearance of a quasar: age seems to play a significant role as well.

  4. NF3: UV Absorption Spectrum Temperature Dependence and the Atmospheric and Climate Forcing Implications

    NASA Technical Reports Server (NTRS)

    Papadimitriou, Vassileios C.; McGillen, Max R.; Fleming, Eric L.; Jackman, Charles H.; Burkholder, James B.

    2013-01-01

    Nitrogen trifluoride (NF3) is an atmospherically persistent greenhouse gas that is primarily removed by UV photolysis and reaction with O((sup 1)D) atoms. In this work, the NF3 gas-phase UV absorption spectrum, sigma(delta,T), was measured at 16 wavelengths between 184.95 and 250 nm at temperatures between 212 and 296 K. A significant spectrum temperature dependence was observed in the wavelength region most relevant to atmospheric photolysis (200-220 nm) with a decrease in sigma(210 nm,T) of approximately 45 percent between 296 and 212 K. Atmospheric photolysis rates and global annually averaged lifetimes of NF3 were calculated using the Goddard Space Flight Center 2-D model and the sigma(delta,T) parameterization developed in this work. Including the UV absorption spectrum temperature dependence increased the stratospheric photolysis lifetime from 610 to 762 years and the total global lifetime from 484 to 585 years; the NF3 global warming potentials on the 20-, 100-, and 500-year time horizons increased less than 0.3, 1.1, and 6.5 percent to 13,300, 17,700, and 19,700, respectively.

  5. Theoretical simulation of 87Rb absorption spectrum in a thermal cell

    NASA Astrophysics Data System (ADS)

    Cheng, Hong; Zhang, Shan-Shan; Xin, Pei-Pei; Cheng, Yuan; Liu, Hong-Ping

    2016-11-01

    In this paper, we present a theoretical simulation of 87Rb absorption spectrum in a thermal cm-cell which is adaptive to the experimental observation. In experiment, the coupling and probe beams are configured to copropagate but perpendicular polarized, making up to five velocity selective optical pumping (VSOP) absorption dips able to be identified. A Λ-type electromagnetically induced transparency (EIT) is also observed for each group of velocity-selected atoms. The spectrum by only sweeping the probe beam can be decomposed into a combination of Doppler-broadened background and three VSOP dips for each group of velocity-selected atoms, accompanied by an EIT peak. This proposed theoretical model can be used to simulate the spectrum adaptive to the experimental observation by the non-linear least-square fit method. The fit for the high quality of experimental observation can determine valuable transition parameters such as decaying rates and coupling beam power accurately. Project supported by the National Basic Research Program of China (Grant No. 2013CB922003) and the National Natural Science Foundation of China (Grant Nos. 91421305, 91121005, and 11174329).

  6. Simulation of energy absorption spectrum in NaI crystal detector for multiple gamma energy using Monte Carlo method

    SciTech Connect

    Wirawan, Rahadi; Waris, Abdul; Djamal, Mitra; Handayani, Gunawan

    2015-04-16

    The spectrum of gamma energy absorption in the NaI crystal (scintillation detector) is the interaction result of gamma photon with NaI crystal, and it’s associated with the photon gamma energy incoming to the detector. Through a simulation approach, we can perform an early observation of gamma energy absorption spectrum in a scintillator crystal detector (NaI) before the experiment conducted. In this paper, we present a simulation model result of gamma energy absorption spectrum for energy 100-700 keV (i.e. 297 keV, 400 keV and 662 keV). This simulation developed based on the concept of photon beam point source distribution and photon cross section interaction with the Monte Carlo method. Our computational code has been successfully predicting the multiple energy peaks absorption spectrum, which derived from multiple photon energy sources.

  7. New transient absorption observed in the spectrum of colloidal CdSe nanoparticles pumped with high-power femtosecond pulses

    SciTech Connect

    Burda, C.; Link, S.; Green, T.C.; El-Sayed, M.A.

    1999-12-09

    The power dependence of the transient absorption spectrum of CdSe nanoparticle colloids with size distribution of 4.0 {+-} 0.4 nm diameter is studied with femtosecond pump-probe techniques. At the lowest pump laser power, the absorption bleaching (negative spectrum) characteristic of the exciton spectrum is observed with maxima at 560 and 480 nm. As the pump laser power increases, two new transient absorptions at 510 and 590 nm with unresolved fast rise (<100 fs) and long decay times ({much{underscore}gt}150 ps) are observed. The energy of each of the positive absorption is red shifted from that of the bleach bands by {approximately}120 MeV. The origin of this shift is discussed in terms of the effect of the internal electric field of the many electron-hole pairs formed within the quantum dot at the high pump intensity, absorption from a metastable excited state or the formation of biexcitons.

  8. Effect of Sn on the optical band gap determined using absorption spectrum fitting method

    SciTech Connect

    Heera, Pawan; Kumar, Anup; Sharma, Raman

    2015-05-15

    We report the preparation and the optical studies on tellurium rich glasses thin films. The thin films of Se{sub 30}Te{sub 70-x} Sn{sub x} system for x= 0, 1.5, 2.5 and 4.5 glassy alloys prepared by melt quenching technique are deposited on the glass substrate using vacuum thermal evaporation technique. The analysis of absorption spectra in the spectral range 400nm–4000 nm at room temperature obtained from UV-VIS-NIR spectrophotometer [Perkin Elmer Lamda-750] helps us in the optical characterization of the thin films under study. The absorption spectrum fitting method is applied by using the Tauc’s model for estimating the optical band gap and the width of the band tail of the thin films. The optical band gap is calculated and is found to decrease with the Sn content.

  9. UV absorption spectrum and photodissociation channels of the simplest Criegee intermediate (CH2OO).

    PubMed

    Dawes, Richard; Jiang, Bin; Guo, Hua

    2015-01-14

    The lowest-lying singlet states of the simplest Criegee intermediate (CH2OO) have been characterized along the O-O dissociation coordinate using explicitly correlated MRCI-F12 electronic structure theory and large active spaces. It is found that a high-level treatment of dynamic electron-correlation is essential to accurately describe these states. A significant well on the B-state is identified at the MRCI-F12 level with an equilibrium structure that differs substantially from that of the ground X-state. This well is presumably responsible for the apparent vibrational structure in some experimental UV absorption spectra, analogous to the structured Huggins band of the iso-electronic ozone. The B-state potential in the Franck-Condon region is sufficiently accurate that an absorption spectrum calculated with a one-dimensional model agrees remarkably well with experiment.

  10. Investigations on the 1.7 micron residual absorption feature in the vegetation reflection spectrum

    NASA Technical Reports Server (NTRS)

    Verdebout, J.; Jacquemoud, S.; Andreoli, G.; Hosgood, B.; Sieber, A.

    1993-01-01

    The detection and interpretation of the weak absorption features associated with the biochemical components of vegetation is of great potential interest to a variety of applications ranging from classification to global change studies. This recent subject is also challenging because the spectral signature of the biochemicals is only detectable as a small distortion of the infrared spectrum which is mainly governed by water. Furthermore, the interpretation is complicated by complexity of the molecules (lignin, cellulose, starch, proteins) which contain a large number of different and common chemical bonds. In this paper, we present investigations on the absorption feature centered at 1.7 micron; these were conducted both on AVIRIS data and laboratory reflectance spectra of leaves.

  11. Jet-cooled infrared absorption spectrum of the v4 fundamental band of HCOOH and HCOOD

    NASA Astrophysics Data System (ADS)

    Luo, Wei; Zhang, Yulan; Li, Wenguang; Duan, Chuanxi

    2017-04-01

    The jet-cooled absorption spectrum of the v4 fundamental band of normal formic acid (HCOOH) and deuterated formic acid (HCOOD) was recorded in the frequency range of 1370-1392 cm-1 with distributed-feedback quantum cascade lasers (DFB-QCLs) as the tunable infrared radiations. A segmented rapid-scan data acquisition scheme was developed for pulsed supersonic jet infrared laser absorption spectroscopy based on DFB-QCLs with a moderate vacuum pumping capacity. The unperturbed band-origin and rotational constants in the excited vibrational state were determined for both HCOOH and HCOOD. The unperturbed band-origin locates at 1379.05447(11) cm-1 for HCOOH, and 1366.48430(39) cm-1 for HCOOD, respectively.

  12. INCIDENCE OF Mg II ABSORPTION SYSTEMS TOWARD FLAT-SPECTRUM RADIO QUASARS

    SciTech Connect

    Chand, Hum; Gopal-Krishna E-mail: krishna@ncra.tifr.res.in

    2012-07-20

    The conventional wisdom that the rate of incidence of Mg II absorption systems, dN/dz (excluding 'associated systems' having a velocity {beta}c relative to the active galactic nucleus (AGN) of less than {approx}5000 km s{sup -1}), is totally independent of the background AGNs has been challenged by a recent finding that dN/dz for strong Mg II absorption systems toward distant blazars is 2.2 {+-} {sup 0.8}{sub 0.6} times the value known for normal optically selected quasars (QSOs). This has led to the suggestion that a significant fraction of even the absorption systems with {beta} as high as {approx}0.1 may have been ejected by the relativistic jets in the blazars, which are expected to be pointed close to our direction. Here, we investigate this scenario using a large sample of 115 flat-spectrum radio-loud quasars (FSRQs) that also possess powerful jets, but are only weakly polarized. We show, for the first time, that dN/dz toward FSRQs is, on the whole, quite similar to that known for QSOs and that the comparative excess of strong Mg II absorption systems seen toward blazars is mainly confined to {beta} < 0.15. The excess relative to FSRQs probably results from a likely closer alignment of blazar jets with our direction; hence, any gas clouds accelerated by them are more likely to be on the line of sight to the active quasar nucleus.

  13. Comparison of path integral molecular dynamics methods for the infrared absorption spectrum of liquid water

    NASA Astrophysics Data System (ADS)

    Habershon, Scott; Fanourgakis, George S.; Manolopoulos, David E.

    2008-08-01

    The ring polymer molecular dynamics (RPMD) and partially adiabatic centroid molecular dynamics (PA-CMD) methods are compared and contrasted in an application to the infrared absorption spectrum of a recently parametrized flexible, polarizable, Thole-type potential energy model for liquid water. Both methods predict very similar spectra in the low-frequency librational and intramolecular bending region at wavenumbers below 2500 cm-1. However, the RPMD spectrum is contaminated in the high-frequency O-H stretching region by contributions from the internal vibrational modes of the ring polymer. This problem is avoided in the PA-CMD method, which adjusts the elements of the Parrinello-Rahman mass matrix so as to shift the frequencies of these vibrational modes beyond the spectral range of interest. PA-CMD does not require any more computational effort than RPMD and it is clearly the better of the two methods for simulating vibrational spectra.

  14. Total Absorption Spectroscopy Study of (92)Rb Decay: A Major Contributor to Reactor Antineutrino Spectrum Shape.

    PubMed

    Zakari-Issoufou, A-A; Fallot, M; Porta, A; Algora, A; Tain, J L; Valencia, E; Rice, S; Bui, V M; Cormon, S; Estienne, M; Agramunt, J; Äystö, J; Bowry, M; Briz, J A; Caballero-Folch, R; Cano-Ott, D; Cucoanes, A; Elomaa, V-V; Eronen, T; Estévez, E; Farrelly, G F; Garcia, A R; Gelletly, W; Gomez-Hornillos, M B; Gorlychev, V; Hakala, J; Jokinen, A; Jordan, M D; Kankainen, A; Karvonen, P; Kolhinen, V S; Kondev, F G; Martinez, T; Mendoza, E; Molina, F; Moore, I; Perez-Cerdán, A B; Podolyák, Zs; Penttilä, H; Regan, P H; Reponen, M; Rissanen, J; Rubio, B; Shiba, T; Sonzogni, A A; Weber, C

    2015-09-04

    The antineutrino spectra measured in recent experiments at reactors are inconsistent with calculations based on the conversion of integral beta spectra recorded at the ILL reactor. (92)Rb makes the dominant contribution to the reactor antineutrino spectrum in the 5-8 MeV range but its decay properties are in question. We have studied (92)Rb decay with total absorption spectroscopy. Previously unobserved beta feeding was seen in the 4.5-5.5 region and the GS to GS feeding was found to be 87.5(25)%. The impact on the reactor antineutrino spectra calculated with the summation method is shown and discussed.

  15. Transient Absorption Spectroscopy of C1 and C2 Criegee Intermediates: UV Spectrum and Reaction Kinetics

    NASA Astrophysics Data System (ADS)

    Smith, M. C.; Chao, W.; Ting, A.; Chang, C. H.; Lin, L. C.; Takahashi, K.; Boering, K. A.; Lin, J. J. M.

    2015-12-01

    Atmospheric production and removal rates of Criegee intermediates produced in alkene ozonolysis must be understood to constrain the importance of these species in VOC oxidation and other processes. To estimate these rates, reliable detection methods and laboratory measurements of the UV absorption spectra and reaction kinetics of Criegee intermediates are needed. Here, transient absorption spectroscopy was used to directly measure the UV spectrum of the C2 Criegee intermediate CH3CHOO in a flow reactor at 295 K. The UV spectrum was scaled to the absolute absorption cross section at 308 nm determined by laser depletion measurements in a molecular beam, resulting in a peak UV cross section of (1.27±0.11) × 10-17 cm2 molecule-1 at 328 nm. This spectrum represents the absorption of the syn and anti conformers of CH3CHOO under near-atmospheric conditions, both of which contribute to CH3CHOO atmospheric removal due to UV photolysis. Transient UV absorption was also used to measure the kinetics of the reaction of the C1 Criegee intermediate CH2OO with water vapor at temperatures from 283 to 324 K. The observed CH2OO decay is quadratic with respect to the H2O concentration, indicating that reaction with water dimer is the primary process affecting CH2OO loss. The rate coefficient for the reaction of CH2OO with water dimer exhibits a strong negative temperature dependence with an Arrhenius activation energy of -8.1±0.6 kcal mol-1. The temperature dependence increases the effective loss rate for CH2OO (relative to 298 K) by a factor of ˜2.5 at 278 K and 70% relative humidity, and decreases the loss rate by a factor of ˜2 at 313 K and 30% humidity, which demonstrates that variations in reaction rate due to temperature differences should be included in estimates of Criegee intermediate removal via reactions with water dimer in the atmosphere.

  16. CFCl3 (CFC-11): UV absorption spectrum temperature dependence measurements and the impact on its atmospheric lifetime and uncertainty

    NASA Astrophysics Data System (ADS)

    McGillen, Max R.; Fleming, Eric L.; Jackman, Charles H.; Burkholder, James B.

    2013-09-01

    (CFC-11) is both an atmospheric ozone-depleting and potent greenhouse gas that is removed primarily via stratospheric UV photolysis. Uncertainty in the temperature dependence of its UV absorption spectrum is a significant contributing factor to the overall uncertainty in its global lifetime and, thus, model calculations of stratospheric ozone recovery and climate change. In this work, the CFC-11 UV absorption spectrum was measured over a range of wavelength (184.95-230 nm) and temperature (216-296 K). We report a spectrum temperature dependence that is less than that currently recommended for use in atmospheric models. The impact on its atmospheric lifetime was quantified using a 2-D model and the spectrum parameterization developed in this work. The calculated global annually averaged lifetime was 58.1 ± 0.7 years (2σ uncertainty due solely to the spectrum uncertainty). The lifetime is slightly reduced and the uncertainty significantly reduced from that obtained using current UV spectrum recommendations.

  17. CFCI3 (CFC-11): UV Absorption Spectrum Temperature Dependence Measurements and the Impact on Atmospheric Lifetime and Uncertainty

    NASA Technical Reports Server (NTRS)

    Mcgillen, Max R.; Fleming, Eric L.; Jackman, Charles H.; Burkholder, James B.

    2014-01-01

    CFCl3 (CFC-11) is both an atmospheric ozone-depleting and potent greenhouse gas that is removed primarily via stratospheric UV photolysis. Uncertainty in the temperature dependence of its UV absorption spectrum is a significant contributing factor to the overall uncertainty in its global lifetime and, thus, model calculations of stratospheric ozone recovery and climate change. In this work, the CFC-11 UV absorption spectrum was measured over a range of wavelength (184.95 - 230 nm) and temperature (216 - 296 K). We report a spectrum temperature dependence that is less than currently recommended for use in atmospheric models. The impact on its atmospheric lifetime was quantified using a 2-D model and the spectrum parameterization developed in this work. The obtained global annually averaged lifetime was 58.1 +- 0.7 years (2 sigma uncertainty due solely to the spectrum uncertainty). The lifetime is slightly reduced and the uncertainty significantly reduced from that obtained using current spectrum recommendations

  18. Rutile TiO2(011)-2 × 1 Reconstructed Surfaces with Optical Absorption over the Visible Light Spectrum.

    PubMed

    Zhou, Rulong; Li, Dongdong; Qu, Bingyan; Sun, Xiaorui; Zhang, Bo; Zeng, Xiao Cheng

    2016-10-12

    The stable structures of the reconstructed rutile TiO2(011) surface are explored based on an evolutionary method. In addition to the well-known "brookite(001)-like" 2 × 1 reconstruction model, three 2 × 1 reconstruction structures are revealed for the first time, all being more stable in the high Ti-rich condition. Importantly, the predicted Ti4O4-2 × 1 surface model not only is in excellent agreement with the reconstructed metastable surface detected by Tao et al. [Nat. Chem. 3, 296 (2011)] from their STM experiment but also gives a consistent formation mechanism and electronic structures with the measured surface. The computed imaginary part of the dielectric function suggests that the newly predicted reconstructed surfaces are capable of optical absorption over the entire visible light spectrum, thereby offering high potential for photocatalytic applications.

  19. Measurement and analysis of the far infrared absorption spectrum of the gaseous mixture H2-CH4

    NASA Technical Reports Server (NTRS)

    Birnbaum, George; Borysow, Aleksandra; Sutter, Herbert G.

    1987-01-01

    The collision-induced absorption of H2-CH4 mixtures was measured from 20 to 900/cm at 195 and 297 K. By subtracting the absorption due to H2-H2 and CH4-CH4 collisions from that of the mixture, the absorption due to H2-CH4 collisions was obtained. This spectrum was analyzed using the BC model line shape to provide a way of estimating the far-IR spectrum of H2-CH4 for various concentrations of H2 and CH4. Theoretical spectral moments were computed with different potential functions and compared with experimental values.

  20. Efficient Algorithms for Estimating the Absorption Spectrum within Linear Response TDDFT

    SciTech Connect

    Brabec, Jiri; Lin, Lin; Shao, Meiyue; Govind, Niranjan; Yang, Chao; Saad, Yousef; Ng, Esmond

    2015-10-06

    We present two iterative algorithms for approximating the absorption spectrum of molecules within linear response of time-dependent density functional theory (TDDFT) framework. These methods do not attempt to compute eigenvalues or eigenvectors of the linear response matrix. They are designed to approximate the absorption spectrum as a function directly. They take advantage of the special structure of the linear response matrix. Neither method requires the linear response matrix to be constructed explicitly. They only require a procedure that performs the multiplication of the linear response matrix with a vector. These methods can also be easily modified to efficiently estimate the density of states (DOS) of the linear response matrix without computing the eigenvalues of this matrix. We show by computational experiments that the methods proposed in this paper can be much more efficient than methods that are based on the exact diagonalization of the linear response matrix. We show that they can also be more efficient than real-time TDDFT simulations. We compare the pros and cons of these methods in terms of their accuracy as well as their computational and storage cost.

  1. Efficient Algorithms for Estimating the Absorption Spectrum within Linear Response TDDFT.

    PubMed

    Brabec, Jiri; Lin, Lin; Shao, Meiyue; Govind, Niranjan; Yang, Chao; Saad, Yousef; Ng, Esmond G

    2015-11-10

    We present a special symmetric Lanczos algorithm and a kernel polynomial method (KPM) for approximating the absorption spectrum of molecules within the linear response time-dependent density functional theory (TDDFT) framework in the product form. In contrast to existing algorithms, the new algorithms are based on reformulating the original non-Hermitian eigenvalue problem as a product eigenvalue problem and the observation that the product eigenvalue problem is self-adjoint with respect to an appropriately chosen inner product. This allows a simple symmetric Lanczos algorithm to be used to compute the desired absorption spectrum. The use of a symmetric Lanczos algorithm only requires half of the memory compared with the nonsymmetric variant of the Lanczos algorithm. The symmetric Lanczos algorithm is also numerically more stable than the nonsymmetric version. The KPM algorithm is also presented as a low-memory alternative to the Lanczos approach, but the algorithm may require more matrix-vector multiplications in practice. We discuss the pros and cons of these methods in terms of their accuracy as well as their computational and storage cost. Applications to a set of small and medium-sized molecules are also presented.

  2. Dynamic registration of D216O absorption spectrum in silica aerogel

    NASA Astrophysics Data System (ADS)

    Sinitsa, L.; Lavrentieva, N.; Lugovskoi, A.

    2014-09-01

    Absorption spectra of the gas phase and adsorbed D2О in the silica aerogel with nanoscale pores were investigated in 3700-5400 cm-1 range using dynamic registration with Fourier Transform spectrometer IFS-125M. Two types of sample with pores of 60 nm wide - the nitrogen gas-treated and untreated aerogels - were examined. The surface treatment of the sample changes noticeably the broadband absorption of adsorbed water. Spectrum of D2O in the pores differs from the spectrum of bulk water as for bandwidth so for band maximum. It was found that treatment of the pores by dry nitrogen leads to increasing hydrophilic properties of the material and to change water band contour. The D2О line widths in both the aerogels exceed those of free monomer in 1.1-3 times at the same pressure. Calculations of self-broadening coefficients of the D2O lines were performed using semi-empirical method based on the impact theory of broadening and includes the correction factors. The calculated results well agree with experimental data. Greater differences were found for the shift of the line centre. The D2O line shifts in the treated pores significantly exceed line shifts in the untreated pores. For some lines, these shifts have the opposite sign indicating complex nature of the molecule-wall interaction.

  3. Frequency-domain method for measuring spectral properties in multiple-scattering media: methemoglobin absorption spectrum in a tissuelike phantom

    NASA Astrophysics Data System (ADS)

    Fishkin, Joshua B.; So, Peter T. C.; Cerussi, Albert E.; Gratton, Enrico; Fantini, Sergio; Franceschini, Maria Angela

    1995-03-01

    We have measured the optical absorption and scattering coefficient spectra of a multiple-scattering medium (i.e., a biological tissue-simulating phantom comprising a lipid colloid) containing methemoglobin by using frequency-domain techniques. The methemoglobin absorption spectrum determined in the multiple-scattering medium is in excellent agreement with a corrected methemoglobin absorption spectrum obtained from a steady-state spectrophotometer measurement of the optical density of a minimally scattering medium. The determination of the corrected methemoglobin absorption spectrum takes into account the scattering from impurities in the methemoglobin solution containing no lipid colloid. Frequency-domain techniques allow for the separation of the absorbing from the scattering properties of multiple-scattering media, and these techniques thus provide an absolute

  4. Absorption spectrum, mass spectrometric properties, and electronic structure of 1,2-benzoquinone.

    PubMed

    Albarran, Guadalupe; Boggess, William; Rassolov, Vitaly; Schuler, Robert H

    2010-07-22

    Absorption spectrophotometric and mass spectrometric properties of 1,2-benzoquinone, prepared in aqueous solution by the hexachloroiridate(IV) oxidation of catechol and isolated by HPLC, are reported. Its absorption spectrum has a broad moderately intense band in the near UV with an extinction coefficient of 1370 M(-1)cm(-1) at its 389 nm maximum. The oscillator strength of this band contrasts with those of the order-of-magnitude stronger approximately 250 nm bands of most 1,4-benzoquinones. Gaussian analysis of its absorption spectrum indicates that it also has modestly intense higher energy bands in the 250-320 nm region. In atmospheric pressure mass spectrometric studies 1,2-benzoquinone exhibits very strong positive and negative mass 109 signals that result from the addition of protons and hydride ions in APCI and ESI ion sources. It is suggested that the hydride adduct is formed as the result of the highly polar character of ortho-quinone. On energetic collision the hydride adduct loses an H atom to produce the 1,2-benzosemiquinone radical anion. The present studies also show that atmospheric pressure mass spectral patterns observed for catechol are dominated by signals of 1,2-benzoquinone resulting from oxidation of catechol in the ion sources. Computational studies of the electronic structures of 1,2-benzoquinone, its proton and hydride ion adducts, and 1,2-benzosemiquinone radical anion are reported. These computational studies show that the structures of the proton and hydride adducts are similar and indicate that the hydride adduct is the proton adduct of a doubly negatively charged 1,2-benzoquinone. The contrast between the properties of 1,2- and 1,4-benzoquinone provides the basis for considerations on the effects of conjugation in aromatic systems.

  5. The anomalous X-ray absorption spectrum of Vela X-1

    NASA Technical Reports Server (NTRS)

    Kallman, T. R.; White, N. E.

    1982-01-01

    The HEAO 2 satellite's Solid State Spectrometer and Monitor Proportional Counter was used to observe one orbit of the massive X-ray binary Vela X-1. Using spectral fits to the data as a function of orbital phase, the column density and state of the material along the line of sight to the X-ray source has been inferred. The spectrum near orbital phase 0.2 compares favorably with absorption by neutral material with a column density corresponding to plausible values of stellar wind velocity law and total primary mass loss rate. Spectra at later orbital phases, which show unexpected strong absorption features near 2.0 and 2.5 keV, are interpreted as due to absorption by material with suppressed opacity below 2.0 keV. The opacity required to produce the observed features implies either the presence of an intense soft X-ray flux, or altered elemental abundances in the gas near Vela X-1.

  6. Optical absorption spectrum and electronic structure of multiferroic hexagonal YMnO3 compound

    NASA Astrophysics Data System (ADS)

    Lima, A. F.; Lalic, M. V.

    2017-02-01

    Optical absorption (OA) spectrum and electronic structure of the hexagonal YMnO3 compound have been investigated by employment of the first-principles calculations based on density functional theory. The calculations were performed upon the ferroelectric structure of the YMnO3, by testing various approximations of the exchange-correlation effects between the Mn d-electrons and considering two types of magnetic ordering of the Mn sub-lattice: (1) collinear anti-ferromagnetic order of the G-type and (2) non-collinear antiferromagnetic order that correspond to magnetic space group P63. The results demonstrate that satisfactory agreement between the theoretical and the experimental OA spectrum can be achieved only if both non-collinear anti-ferromagnetic order of the Mn spins and strong correlations between the Mn d-electrons are taken into account. The latter is found to be best described by effective Hubbard parameter Ueff = 2.55 eV. The principal features of the OA spectrum are interpreted in terms of calculated electronic structure. It is found that the most important, threshold 1.6 eV OA peak is generated by electron transitions from strongly hybridized occupied Mn d- and its neighboring in-plane O p-states to unoccupied Mn d-states. It is also concluded that the electronic gap (calculated as ∼1.1 eV) should be smaller than the optical one (∼1.6 eV).

  7. Absorption spectrum and absolute absorption cross sections of CH3O2 radicals and CH3I molecules in the wavelength range 7473-7497 cm(-1).

    PubMed

    Faragó, Eszter P; Viskolcz, Bela; Schoemaecker, Coralie; Fittschen, Christa

    2013-12-05

    The absorption spectrum of CH3O2 radicals and CH3I molecules has been measured in the range 7473-7497 cm(-1). CH3O2 radicals have been generated by 248 nm laser photolysis of CH3I in the presence of O2, and the relative absorption has been measured by time-resolved continuous-wave cavity ring-down spectroscopy (cw-CRDS). Calibration of the relative absorption spectrum has been carried out on three distinct wavelengths by carefully measuring CH3O2 decays under different experimental conditions and extracting the initial radical concentration (and with this the absolute absorption cross sections) by using the well-known rate constant for the CH3O2 self-reaction. The following, pressure-independent absorption cross sections were determined: 3.41 × 10(-20), 3.40 × 10(-20), and 2.11 × 10(-20) cm(2) at 7748.18, 7489.16, and 7493.33 cm(-1). These values are 2-3 times higher than previous determinations ( Pushkarsky, M. B.; Zalyubovsky, S. J.; Miller, T. A. J. Chem. Phys. 2000, 112 (24), 10695 - 10698 and Atkinson, D. B.; Spillman, J. L. J. Phys. Chem. A 2002, 106 (38), 8891 - 8902). The absorption spectrum of the stable precursor CH3I has also been determined and three characteristic sharp absorption lines with absorption cross sections up to 2 × 10(-21) cm(2) have been observed in this wavelength range.

  8. Theoretical Calculation of the Particle Spectrum Following Absorption of Stopped Negative Pion by Helium -3.

    NASA Astrophysics Data System (ADS)

    Roginsky, Jacob

    1987-09-01

    In 1982 Gotta et al^1, experimentally observed the branching ratios for n + D, n + D^', where D ^' represents the virtual S _{0} np state, and the probability density for three-body (n + n + p) events following absorption of stopped (pi) ^{-} in ^3He. The purpose of the thesis was to calculate theoretically the particle spectrum following the absorption, using the two-nucleon model of pion absorption ^2 and to compare it to the results obtained in the Gotta experiment. The ^3 He pionic atom is unique in that it is the simplest nucleus which provides an opportunity for the verification of the two-nucleon absorption model. For this calculation the effective two-nucleon Hamiltonian^{3,4,5} was chosen as the T-matrix for low energy pion scattering from one nucleon followed by absorption on the second nucleon. The constants g_{0} and g _1 are obtained from the corresponding two-nucleon interaction processes resulting in the pion production with the first one corresponding to the spin triplet and the second to the spin singlet nucleon interactions. The initial bound-state momentum-space wave function was chosen ^6 to be consistent with the charge radius of the ^3He nucleus and to have the correct singularities generated by the asymptotic two- and three-body channels. The final-state wave functions are characterized by non-interacting n + D, non-interacting n + D^', and a non-interacting n + n + p states (when the energy is roughly equally shared between the nucleons). The results of the calculation turned out to be in a fairly good agreement with those obtained in ^1. The branching ratio of singlet deuteron rate of transition to the corresponding rate into deuteron differed from the result in the former by less than one percent. As a check some of the results obtained in ^6 were reproduced, giving a very good agreement with it as well. The calculation indicates that the two-nucleon absorption model gives a good result when used for a simple system like ^3He. Those

  9. A ghostly damped Ly α system revealed by metal absorption lines

    NASA Astrophysics Data System (ADS)

    Fathivavsari, H.; Petitjean, P.; Zou, S.; Noterdaeme, P.; Ledoux, C.; Krühler, T.; Srianand, R.

    2017-03-01

    We report the discovery of the first 'ghostly' damped Ly α absorption system (DLA), which is identified by the presence of absorption from strong low-ion species at zabs = 1.704 65 along the line of sight to the quasar SDSS J113341.29-005740.0 with zem = 1.704 41. No Ly α absorption trough is seen associated with these absorptions because the DLA trough is filled with the leaked emission from the broad emission-line region of the quasar. By modelling the quasar spectrum and analysing the metal lines, we derive log N(H I)(cm-2) ∼21.0 ± 0.3. The DLA cloud is small (≤0.32 pc), thus not covering entirely the broad-line region and is located at ≥39 pc from the central active galactic nucleus (AGN). Although the DLA is slightly redshifted relative to the quasar, its metallicity ([S/H] = -0.41 ± 0.30) is intermediate between what is expected from infalling and outflowing gas. It could be possible that the DLA is part of some infalling material accreting on to the quasar host galaxy through filaments, and that its metallicity is raised by mixing with the enriched outflowing gas emanating from the central AGN. Current DLA surveys miss these 'ghostly' DLAs, and it would be important to quantify the statistics of this population by searching the Sloan Digital Sky Survey (SDSS) data base using metal absorption templates.

  10. The Millimeter Direct Absorption and Fourier Transform Microwave Spectrum of Vanadium Sulfide (X^{4}Σ^{-})

    NASA Astrophysics Data System (ADS)

    Adande, Gilles; Ziurys, L. M.

    2013-06-01

    The pure rotational spectrum of VS (X^{4}Σ^{-} ) has been measured with Fourier transform microwave (FTMW) and millimeter-wave direct absorption methods in the frequency range of 5-40 GHz and 210-315 GHz. Discharge assisted laser ablation (DALAS) of a vanadium rod in presence of H_{2}S gas was used to synthesize the radical in the microwave region. In the millimeter-wave range, the species was produced from the mixture of CS_{2} and VCl_{4} vapor in a DC discharge. The hyperfine structure was resolved and accurate fine and hyperfine parameters were obtained. Insights into the bonding character can be gleamed from the hyperfine constants, and an estimate of the position of two low-lying interacting electronic states can be obtain from the fine structure parameters. Details of these results will be discussed.

  11. Infrared absorption spectrum of the simplest Criegee intermediate CH2OO.

    PubMed

    Su, Yu-Te; Huang, Yu-Hsuan; Witek, Henryk A; Lee, Yuan-Pern

    2013-04-12

    The Criegee intermediates are carbonyl oxides postulated to play key roles in the reactions of ozone with unsaturated hydrocarbons; these reactions constitute an important mechanism for the removal of unsaturated hydrocarbons and for the production of OH in the atmosphere. Here, we report the transient infrared (IR) absorption spectrum of the simplest Criegee intermediate CH2OO, produced from CH2I + O2 in a flow reactor, using a step-scan Fourier-transform spectrometer. The five observed bands provide definitive identification of this intermediate. The observed vibrational frequencies are more consistent with a zwitterion rather than a diradical structure of CH2OO. The direct IR detection of CH2OO should prove useful for kinetic and mechanistic investigations of the Criegee mechanism.

  12. Absorption Features in the X-ray Spectrum of an Ordinary Radio Pulsar

    NASA Astrophysics Data System (ADS)

    Kargaltsev, Oleg; Durant, Martin; Misanovic, Zdenka; Pavlov, George G.

    2012-08-01

    The vast majority of known nonaccreting neutron stars (NSs) are rotation-powered radio and/or γ-ray pulsars. So far, their multiwavelength spectra have all been described satisfactorily by thermal and nonthermal continuum models, with no spectral lines. Spectral features have, however, been found in a handful of exotic NSs and were thought to be a manifestation of their unique traits. Here, we report the detection of absorption features in the x-ray spectrum of an ordinary rotation-powered radio pulsar, J1740+1000. Our findings bridge the gap between the spectra of pulsars and other, more exotic, NSs, suggesting that the features are more common in the NS spectra than they have been thought so far.

  13. The UV-vis absorption spectrum of the flavonol quercetin in methanolic solution: A theoretical investigation.

    PubMed

    Andrade-Filho, T; Ribeiro, T C S; Del Nero, J

    2009-07-01

    The UV-vis absorption spectrum of the solvated quercetin molecule in methanol was investigated theoretically by means of an elegant type of QM/MM scheme better known as sequential Monte Carlo/quantum mechanics (S-MC/QM) methodology. A set of 125 uncorrelated Monte Carlo molecular liquid structures were properly selected through the autocorrelation function of the energy in order to be used in the quantum mechanical calculations. These molecular liquid structures were obtained by means of the radial and minimum distance distribution functions. A detailed account of the pattern of hydrogen bond structures obtained in this study is also available. The computed results obtained here were directly compared with the available experimental data in order to validate our theoretical model and through this comparison a very good conformity between theoretical and available experimental results was found.

  14. Temperature effect on the two-photon absorption spectrum of all-trans-β-carotene.

    PubMed

    Vivas, M G; Mendonca, C R

    2012-07-05

    In this report, we investigate the influence of temperature on the two-photon absorption (2PA) spectrum of all-trans-β-carotene using the femtosecond white-light-continuum Z-scan technique. We observed that the 2PA cross-section decreases quadratically with the temperature. Such effect was modeled using a three-energy-level diagram within the sum-over-essential states approach, assuming temperature dependencies to the transition dipole moment and refractive index of the solvent. The results show that the transition dipole moments from ground to excited state and between the excited states, which governed the two-photon matrix element, have distinct behaviors with the temperature. The first one presents a quadratic dependence, while the second exhibits a linear dependence. Such effects were attributed mainly to the trans→cis thermal interconversion process, which decreases the effective conjugation length, contributing to diminishing the transition dipole moments and, consequently, the 2PA cross-section.

  15. Absorption features in the x-ray spectrum of an ordinary radio pulsar.

    PubMed

    Kargaltsev, Oleg; Durant, Martin; Misanovic, Zdenka; Pavlov, George G

    2012-08-24

    The vast majority of known nonaccreting neutron stars (NSs) are rotation-powered radio and/or γ-ray pulsars. So far, their multiwavelength spectra have all been described satisfactorily by thermal and nonthermal continuum models, with no spectral lines. Spectral features have, however, been found in a handful of exotic NSs and were thought to be a manifestation of their unique traits. Here, we report the detection of absorption features in the x-ray spectrum of an ordinary rotation-powered radio pulsar, J1740+1000. Our findings bridge the gap between the spectra of pulsars and other, more exotic, NSs, suggesting that the features are more common in the NS spectra than they have been thought so far.

  16. Analysis of ultraviolet absorption spectrum of Chinese herbal medicine-Cortex Fraxini by double ANN

    NASA Astrophysics Data System (ADS)

    Bai, Lifei; Zhang, Haitao; Wang, Hongxia; Li, Junfeng; Lu, Lei; Zhang, Hanqi; Wang, Hongyan

    2006-11-01

    A fast, accurate and convenient method for the simultaneous determination of multi-component in the Chinese herbal medicine was proposed by using ultraviolet absorption spectrum. In this method, dummy components were added to training sample, and a double artificial neural network (DANN) that has the function of high self-revision and self-simulation was used. Effect of other interference components could be eliminated by adjusting concentration of dummy components. Therefore, the accuracy of concentration prediction for multi-component in the complicated Chinese herbal medicine was improved. It has been realized that two effective components of Cortex Fraxini, aesculin and aesculetin, were simultaneously determined, without any separation. The predicted accuracy was 92% within the permitted relative errors. The measurement precisions of the aesculin and aesculetin were 0.37% and 1.5%, respectively.

  17. Tight binding model of conformational disorder effects on the optical absorption spectrum of polythiophenes.

    PubMed

    Bombile, Joel H; Janik, Michael J; Milner, Scott T

    2016-05-14

    Semiconducting polymers are soft materials with many conformational degrees of freedom. The limited understanding of how conformational disorder affects their optoelectronic properties is a key source of difficulties that limits their widespread usage in electronic devices. We develop a coarse-grained approach based on the tight binding approximation to model the electronic degrees of freedom of polythiophene chains, taking into account conformational degrees of freedom. Particularly important is dihedral disorder, which disrupts extended electronic states. Our tight binding model is parameterized using density functional theory (DFT) calculations of the one-dimensional band structures for chains with imposed periodic variations in dihedral angles. The model predicts valence and conduction bands for these chain conformations that compare well to DFT results. As an initial application of our model, we compute the optical absorption spectrum of poly(3-hexylthiophene) chains in solution. We observe a broadening of the absorption edge resulting from dihedral disorder, just shy of the experimental broadening. We conclude that the effects of molecular disorder on the optoelectronic properties of conjugated polymer single chains can be mostly accounted for by torsional disorder alone.

  18. CHBr3 (bromoform): Revised UV Absorption Spectrum and Atmospheric Photolysis Rates

    NASA Astrophysics Data System (ADS)

    Burkholder, J. B.; Papanastasiou, D.; McKeen, S. A.

    2013-12-01

    CHBr3 (bromoform) is a short-lived atmospheric trace compound primarily of natural origin that is a source of reactive bromine in both the troposphere and stratosphere. Estimating the impact of CHBr3 on the environment and its transport to the stratosphere requires a thorough understanding of its atmospheric loss processes, which are primarily UV photolysis and reaction with the OH radical. In this presentation, new measurements of the UV absorption spectrum of CHBr3 will be presented. Spectra were measured at wavelengths between 300 and 345 nm at temperatures between 260 and 330 K using cavity ring-down spectroscopy. The present results will be compared with currently recommended values for use in atmospheric modeling taken from Moortgat et al. [The tropospheric chemistry of ozone in the polar regions, edited by H. Niki and K. H. Becker, Springer-Verlag Berlin Heidelberg, 1993]. The discrepancies and impact on CHBr3 photolysis lifetime will be discussed. A parameterization of the CHBr3 UV spectrum for use in atmospheric models will be presented and local photolysis rate calculations used to highlight the impact of the revised cross section data on local lifetimes and the relative importance of photolysis loss versus reaction with the OH radical. The results from the present study will contribute to a better understanding (and accuracy) of estimates of stratospheric ozone loss due to very short-lived brominated substances.

  19. Absorption spectrum analysis based on singular value decomposition for photoisomerization and photodegradation in organic dyes

    NASA Astrophysics Data System (ADS)

    Kawabe, Yutaka; Yoshikawa, Toshio; Chida, Toshifumi; Tada, Kazuhiro; Kawamoto, Masuki; Fujihara, Takashi; Sassa, Takafumi; Tsutsumi, Naoto

    2015-10-01

    In order to analyze the spectra of inseparable chemical mixtures, many mathematical methods have been developed to decompose them into the components relevant to species from series of spectral data obtained under different conditions. We formulated a method based on singular value decomposition (SVD) of linear algebra, and applied it to two example systems of organic dyes, being successful in reproducing absorption spectra assignable to cis/trans azocarbazole dyes from the spectral data after photoisomerization and to monomer/dimer of cyanine dyes from those during photodegaradation process. For the example of photoisomerization, polymer films containing the azocarbazole dyes were prepared, which have showed updatable holographic stereogram for real images with high performance. We made continuous monitoring of absorption spectrum after optical excitation and found that their spectral shapes varied slightly after the excitation and during recovery process, of which fact suggested the contribution from a generated photoisomer. Application of the method was successful to identify two spectral components due to trans and cis forms of azocarbazoles. Temporal evolution of their weight factors suggested important roles of long lifetimed cis states in azocarbazole derivatives. We also applied the method to the photodegradation of cyanine dyes doped in DNA-lipid complexes which have shown efficient and durable optical amplification and/or lasing under optical pumping. The same SVD method was successful in the extraction of two spectral components presumably due to monomer and H-type dimer. During the photodegradation process, absorption magnitude gradually decreased due to decomposition of molecules and their decaying rates strongly depended on the spectral components, suggesting that the long persistency of the dyes in DNA-complex related to weak tendency of aggregate formation.

  20. Multi-heterodyne molecular absorption spectrum detection of H13C14N based on dual frequency combs

    NASA Astrophysics Data System (ADS)

    Yang, Honglei; Wei, Haoyun; Li, Yan

    2014-11-01

    In order to acquire high-resolution molecular absorption spectrum, a measurement system consisting of two Erbium-doped fiber optical frequency combs based on multi-heterodyne detection method is established. Preliminary result shows that the specific line in the RF spectrum corresponding to 6452.59 cm-1 in the optical region, where there is an error of 0.14 cm-1 compared with the simulation result. And the further improvement of this system will be discussed in the end.

  1. Glitch-free X-ray absorption spectrum under high pressure obtained using nano-polycrystalline diamond anvils.

    PubMed

    Ishimatsu, Naoki; Matsumoto, Ken; Maruyama, Hiroshi; Kawamura, Naomi; Mizumaki, Masaichiro; Sumiya, Hitoshi; Irifune, Tetsuo

    2012-09-01

    Nano-polycrystalline diamond (NPD) [Irifune et al. (2003), Nature (London), 421, 599] has been used to obtain a glitch-free X-ray absorption spectrum under high pressure. In the case of conventional single-crystal diamond (SCD) anvils, glitches owing to Bragg diffraction from the anvils are superimposed on X-ray absorption spectra. The glitch has long been a serious problem for high-pressure research activities using X-ray spectroscopy because of the difficulties of its complete removal. It is demonstrated that NPD is one of the best candidate materials to overcome this problem. Here a glitch-free absorption spectrum using the NPD anvils over a wide energy range is shown. The advantage and capability of NPD anvils is discussed by a comparison of the glitch map with that of SCD anvils.

  2. Temperature sounding from the absorption spectrum of CO2 at 4.3 microns. [in stratosphere and lower mesosphere

    NASA Technical Reports Server (NTRS)

    Toth, R. A.

    1977-01-01

    A new method is described for obtaining the temperature profile in the stratosphere and lower mesosphere from observations of the absorption spectrum of the high J lines of carbon dioxide at 4.3 microns. This concept is based upon the measurement of the integrated absorption of individual CO2 lines whose strengths depend strongly on temperature and that the absorption of these lines are obtained from measurements of the solar or stellar spectrum through an atmospheric path. The technique involves a rapidly converging iterative process in which the equivalent widths of the individual vibration-rotation lines of CO2 are used. Theoretical calculations are presented for balloon and satellite observations using a model atmosphere. Experimental results are given from spectra obtained with a balloon-borne Fourier interferometer spectrometer in which the sun was observed at low zenith angles. The experimental results are compared to rocketsonde data.

  3. Electronically excited rubidium atom in helium clusters and films. II. Second excited state and absorption spectrum.

    PubMed

    Leino, Markku; Viel, Alexandra; Zillich, Robert E

    2011-01-14

    Following our work on the study of helium droplets and film doped with one electronically excited rubidium atom Rb(∗) ((2)P) [M. Leino, A. Viel, and R. E. Zillich, J. Chem. Phys. 129, 184308 (2008)], we focus in this paper on the second excited state. We present theoretical studies of such droplets and films using quantum Monte Carlo approaches. Diffusion and path integral Monte Carlo algorithms combined with a diatomics-in-molecule scheme to model the nonpair additive potential energy surface are used to investigate the energetics and the structure of Rb(∗)He(n) clusters. Helium films as a model for the limit of large clusters are also considered. As in our work on the first electronic excited state, our present calculations find stable Rb(∗)He(n) clusters. The structures obtained are however different with a He-Rb(∗)-He exciplex core to which more helium atoms are weakly attached, preferentially on one end of the core exciplex. The electronic absorption spectrum is also presented for increasing cluster sizes as well as for the film.

  4. Direct measurement of the absolute absorption spectrum of individual semiconducting single-wall carbon nanotubes

    NASA Astrophysics Data System (ADS)

    Blancon, Jean-Christophe; Paillet, Matthieu; Tran, Huy Nam; Than, Xuan Tinh; Guebrou, Samuel Aberra; Ayari, Anthony; Miguel, Alfonso San; Phan, Ngoc-Minh; Zahab, Ahmed-Azmi; Sauvajol, Jean-Louis; Fatti, Natalia Del; Vallée, Fabrice

    2013-09-01

    The optical properties of single-wall carbon nanotubes are very promising for developing novel opto-electronic components and sensors with applications in many fields. Despite numerous studies performed using photoluminescence or Raman and Rayleigh scattering, knowledge of their optical response is still partial. Here we determine using spatial modulation spectroscopy, over a broad optical spectral range, the spectrum and amplitude of the absorption cross-section of individual semiconducting single-wall carbon nanotubes. These quantitative measurements permit determination of the oscillator strength of the different excitonic resonances and their dependencies on the excitonic transition and type of semiconducting nanotube. A non-resonant background is also identified and its cross-section comparable to the ideal graphene optical absorbance. Furthermore, investigation of the same single-wall nanotube either free standing or lying on a substrate shows large broadening of the excitonic resonances with increase of oscillator strength, as well as stark weakening of polarization-dependent antenna effects, due to nanotube-substrate interaction.

  5. A variable absorption feature in the X-ray spectrum of a magnetar.

    PubMed

    Tiengo, Andrea; Esposito, Paolo; Mereghetti, Sandro; Turolla, Roberto; Nobili, Luciano; Gastaldello, Fabio; Götz, Diego; Israel, Gian Luca; Rea, Nanda; Stella, Luigi; Zane, Silvia; Bignami, Giovanni F

    2013-08-15

    Soft-γ-ray repeaters (SGRs) and anomalous X-ray pulsars (AXPs) are slowly rotating, isolated neutron stars that sporadically undergo episodes of long-term flux enhancement (outbursts) generally accompanied by the emission of short bursts of hard X-rays. This behaviour can be understood in the magnetar model, according to which these sources are mainly powered by their own magnetic energy. This is supported by the fact that the magnetic fields inferred from several observed properties of SGRs and AXPs are greater than-or at the high end of the range of-those of radio pulsars. In the peculiar case of SGR 0418+5729, a weak dipole magnetic moment is derived from its timing parameters, whereas a strong field has been proposed to reside in the stellar interior and in multipole components on the surface. Here we show that the X-ray spectrum of SGR 0418+5729 has an absorption line, the properties of which depend strongly on the star's rotational phase. This line is interpreted as a proton cyclotron feature and its energy implies a magnetic field ranging from 2 × 10(14) gauss to more than 10(15) gauss.

  6. Effects of color centers absorption on the spectrum of the temperature-dependent radiation-induced attenuation in fiber.

    PubMed

    Jin, Jing; Hou, Yunxia; Liu, Chunjing

    2015-02-01

    Spectra ranging from 800 to 1650 nm of the temperature-dependent radiation-induced attenuation (RIA) in the irradiated and sufficiently annealed fiber with germanium and phosphorous dopant has been measured. These RIA spectra were investigated based on the mechanism of color centers absorption. With the configurational coordinate model, these RIA spectra were decomposed by the absorption bands of three kinds of color centers. The effects of color centers absorption on the spectrum of temperature-dependent RIA is discussed by comparing the absorption intensity of different color centers at a same wavelength. Moreover, the temperature-dependent RIA of the fiber has been measured separately at 850, 1310, and 1550 nm. The measured results agreed well with the analysis of RIA spectra.

  7. The Hubble Space Telescope Quasar Absorption Line Key Project: The Unusual Absorption-Line System in the Spectrum of PG 2302+029---Ejected or Intervening?

    NASA Astrophysics Data System (ADS)

    Jannuzi, B. T.; Hartig, G. F.; Kirhakos, S.; Sargent, W. L. W.; Turnshek, D. A.; Weymann, R. J.; Bahcall, J. N.; Bergeron, J.; Boksenberg, A.; Savage, B. D.; Schneider, D. P.; Wolfe, A. M.

    1996-10-01

    We report the discovery of a high-ionization broad absorption line system at a redshift of zabs = 0.695 in the spectrum of the zem = 1.052 radio-quiet quasar PG 2302+029. Broad absorption with FWHM from 3000 to 5000 km s-1 is detected from C IV, N V, and O VI in Hubble Space Telescope (HST) Faint Object Spectrograph spectra of the quasar. A narrow-line system (FWHM ~ 250 km s-1) at zabs = 0.7016 is resolved from the broad blend and includes absorption by Ly alpha and the C IV, N V, and O VI doublets. No absorption by low-ionization metal species (e.g., Si II and Mg II) is detected in the HST or ground-based spectra for either the broad or the narrow system. The centroids of the broad system lines are displaced by ~56,000 km s-1 to the blue of the quasar's broad emission lines. The reddest extent of the broad-line absorption is more than 50,000 km s-1 from the quasar. The properties of this system are unprecedented, whether it is an intervening or an ejected system.

  8. The Hubble Space Telescope Quasar Absorption Line Key Project: The Unusual Absorption-Line System in the Spectrum of PG 2302+029--Ejected or Intervening?

    NASA Technical Reports Server (NTRS)

    Jannuzi, B. T.; Hartig, G. F.; Kirhakos, S.; Sargent, W. L. W.; Turnshek, D. A.; Weymann, R. J.; Bahcall, J. N.; Bergeron, J.; Boksenberg, A.; Savage, B. D.; Schneider, D. P.; Wolfe, A. M.

    1996-01-01

    We report the discovery of a high-ionization broad absorption line system at a redshift of z(sub abs) = 0.695 in the spectrum of the z(sub em) = 1.052 radio-quiet quasar PG 2302+029. Broad absorption with FWHM from 3000 to 5000 km/s is detected from C iv, N v, and O vi in Hubble Space Telescope (HST) Faint Object Spectrograph spectra of the quasar. A narrow-line system (FWHM approx. 250 km/s) at z(sub abs) = 0.7016 is resolved from the broad blend and includes absorption by Ly alpha and the C iv, N v, and O vi doublets. No absorption by low-ionization metal species (e.g., Si II and Mg II) is detected in the HST or ground-based spectra for either the broad or the narrow system. The centroids of the broad system lines are displaced by approx. 56,000 km/s to the blue of the quasar's broad emission lines. The reddest extent of the broad-line absorption is more than 50,000 km/s from the quasar. The properties of this system are unprecedented, whether it is an intervening or an ejected system.

  9. Gas cell based on optical contacting for fundamental spectroscopy studies with initial reference absorption spectrum of H2O vapor at 1723 K and 0.0235 bar

    NASA Astrophysics Data System (ADS)

    Melin, Scott T.; Sanders, Scott T.

    2016-09-01

    A gas cell, using optically contacted sapphire windows to form a hot vapor seal, has been created for high temperature fundamental spectroscopy studies. It is designed to operate at temperatures from 280-2273 K and pressures from vacuum to 1.3 bar. Using the cell in conjunction with an external cavity diode laser spectrometer, a reference H2O vapor absorption spectrum at P=0.0235±0.0036 bar and T=1723±6 K was measured with 0.0001 cm-1 resolution over the 7326-7598 cm-1 range. Comparison of the measured spectrum to simulations reveals errors in both the HITEMP and BT2 databases. This work establishes heated static cell capabilities at temperatures well above the typical limit of approximately 1300 K set by quartz material properties. This paper addresses the design of the cell as well as the cell's limitations.

  10. Spectrum of excess partial molar absorptivity. I. Near infrared spectroscopic study of aqueous acetonitrile and acetone.

    PubMed

    Koga, Yoshikata; Sebe, Fumie; Minami, Takamasa; Otake, Keiko; Saitow, Ken-ichi; Nishikawa, Keiko

    2009-09-03

    We study the mixing schemes or the molecular processes occurring in aqueous acetonitrile (ACN) and acetone (ACT) by near-infrared spectroscopy (NIR). Both solutions (any other aqueous solutions) are not free from strong and complex intermolecular interactions. To tackle such a many-body problem, we first use the concept of the excess molar absorptivity, epsilonE, which is a function of solute mole fraction in addition to that of wavenumber, nu. The plots of epsilonE calculated from NIR spectra for both aqueous solutions against nu showed two clearly separated bands at 5020 and 5230 cm(-1); the former showed negative and the latter positive peaks. At zero and unity mole fractions of solute, epsilonE is identically zero independent of nu. Similar to the thermodynamic excess functions, both negative and positive bands grow in size from zero to the minimum (or the maximum) and back to zero, as the mole fraction varies from 0 to 1. Since the negative band's nu-locus coincides with the NIR spectrum of ice, and the positive with that of liquid H(2)O, we suggest that on addition of solute the "ice-likeness" decreases and the "liquid-likeness" increases, reminiscent of the two-mixture model for liquid H(2)O. The modes of these variations, however, are qualitatively different between ACN-H(2)O and ACT-H(2)O. The former ACN is known to act as a hydrophobe and ACT as a hydrophile from our previous thermodynamic studies. To see the difference more clearly, we introduced and calculated the excess partial molar absorptivity of ACN and ACT, epsilon(E)(N) and epsilon(E)(T), respectively. The mole fraction dependences of epsilon(E)(N) and epsilon(E)(T) show qualitatively different behavior and are consistent with the detailed mixing schemes elucidated by our earlier differential thermodynamic studies. Furthermore, we found in the H(2)O-rich region that the effect of hydrophobic ACN is acted on the negative band at 5020 cm(-1), while that of hydrophilic ACT is on the positive high

  11. Explicit solvent effects on the visible absorption spectrum of a photosynthetic pigment: Chlorophyll-c 2 in methanol

    NASA Astrophysics Data System (ADS)

    Jaramillo, Paula; Coutinho, Kaline; Cabral, Benedito J. C.; Canuto, Sylvio

    2011-11-01

    The explicit solvent effects on the light absorption properties of a photosynthetic pigment are analyzed from a combined study using Monte Carlo simulation and quantum mechanical Density-Functional Theory calculations. The case considered is chlorophyll-c2 in methanol and excellent results are obtained for both position and intensities in the entire visible region. Explicit solvent molecules are essential for describing the absorption spectrum. Analysis is also made of the coordination of the Mg atom, the influence of solute-solvent hydrogen bonds, the existence and location of dark states for internal conversion mechanisms and the adequacy of the four-state model for classifying the transitions.

  12. The near-infrared (1.30-1.70 microm) absorption spectrum of methane down to 77 K.

    PubMed

    Kassi, Samir; Gao, Bo; Romanini, Daniele; Campargue, Alain

    2008-08-14

    The high resolution absorption spectrum of methane has been recorded at liquid nitrogen temperature by direct absorption spectroscopy between 1.30 and 1.70 microm (5850-7700 cm(-1)) using a newly developed cryogenic cell and a series of DFB diode lasers. The investigated spectral range includes part of the tetradecad and the full icosad regions for which only very partial theoretical analysis are available. The analysis of the low temperature spectrum will benefit from the reduction of the rotational congestion and from the narrowing by a factor of 2 of the Doppler linewidth allowing the resolution of a number of multiplets. Moreover, the energy value and rotational assignment of the angular momentum J of the lower state of a given transition can be obtained from the temperature variation of its line intensity. This procedure is illustrated in selected spectral regions by a continuous monitoring of the spectrum during the cell cool-down to 77 K, the temperature value being calculated at each instant from the measured Doppler linewidth. A short movie showing the considerable change of a spectrum during cool-down is attached as Supplementary Material. The method applied to a 30 cm(-1) section of the tetradecad spectrum around 6110 cm(-1) has allowed an unambiguous determination of the J values of part of the observed transitions.

  13. [Study on the absorption spectrum properties of flexible black silicon doped with sulfur and fluorine based on first-principles].

    PubMed

    Wei, Wei; Zhu, Yong; Lin, Cheng; Tian, Li; Xu, Zu-Wen; Nong, Jin-Peng

    2014-04-01

    It is quite urgent to need a flexible photodetector in the ultraviolet-visible-near infrared region for building a miniaturization broadband spectrometer. In the present paper, one kind of flexible black silicon doped with sulfur and fluorine was proposed and the optical absorption spectrum was investigated in broadband region. Firstly, the electronic structure, band structure and the optical absorption properties of the flexible black silicon doped with sulfur and fluoride were calculated using the first-principles pseudo potential calculations based on density-functional theory. Then, the absorption spectrum model of the flexible black silicon was built based on both the first-principles and finite domain time difference method. The results show that the cut-off wavelength has a red shift as the band gap of doped material becomes narrower. The higher the doping concentration is, the higher the optical absorption coefficient is obtained. The absorption coefficient of flexible black silicon doped with 50% sulfur is 8.3 times higher than that of 1.5% sulfur doping sample at the wavelength of 1 500 nm while the ratio turns to be 3 times when doped with 50% and 1.5% fluoride. The black silicon with small-size surface microstructure has the highest absorptance in the near-infrared region at the same doping concentration of 50%. Finally, a sample of flexible black silicon was fabricated by the femtosecond laser auto scanning system. The test results indicate that the absorptance of the sample is higher than 95% both in the ultraviolet and visible region and is fluctuated from 70% to 80% in the near-infrared region. It shows that as a novel light-absorbing material in broadband region the flexible black silicon doped with Sulfur and Fluorine has an potential application in exploring miniaturization broadband spectroscopy.

  14. Diode-laser absorption spectroscopy of supersonic carbon cluster beams: the nu 3 spectrum of C5.

    PubMed

    Heath, J R; Cooksy, A L; Gruebele, M H; Schmuttenmaer, C A; Saykally, R J

    1989-05-05

    A new spectroscopic experiment has been developed in which rovibrational transitions of supersonically cooled carbon clusters, which were produced by laser vaporization of graphite, have been measured by direct-absorption diode-laser spectroscopy. Thirty-six sequential rovibrational lines of the nu 3 band of the C5 carbon cluster have been measured with Doppler-limited resolution. The absorption spectrum is characteristic of a linear molecule with a center of symmetry. Least-squares analysis of the spectrum indicates an effective carbon-carbon bond length of 1.283 angstroms, in good agreement with ab initio quantum chemical calculations. This work confirms the detection of C5 in IRC + 10216 reported in the accompanying paper.

  15. [Absorption spectrum study of HeLa cells treated with vacuum and low-energy ions implantation].

    PubMed

    Zhang, Feng-Qiu; Zhao, Yuan-Li; Ge, Xiang-Hong; Liu, Wei; Zhang, Guang-Shui; Qin, Guang-Yong

    2009-08-01

    Mineral oil was selected to protect HeLa cells from water evaporation during low-energy ions implantation in the present paper. Then, HeLa cells having been treated with vacuum and low-energy N+ ions implantation were used to collect ultraviolet absorption spectrum by spectrophotometer. Analytical results indicated that HeLa cells had some characteristic absorption peaks near 202 and 260 nm, respectively. And then the study also found: (1) The spectral intensity increased with the vacuum treatment time. In addition, the effect of vacuum on cellular spectrum was greater than that of mineral oil. (2) The influence of low energy N+ ions on absorption spectrum was far more than that of vacuum. (3) The spectral intensity increased with the implantation dose. According to these results, the effect of low-energy N+ ions implantation and vacuum on tumorous cells (HeLa cells), especially on the molecular configuration and component of tumorous cells (HeLa cells) was discussed. In a word, this study provides a basis for further research on the functionary mechanism of low-energy ions implantation on biomaterial.

  16. Dynamic registration of the absorption spectrum of water in the SiO(2) nanopores in high-frequency range.

    PubMed

    Sinitsa, L N; Lugovskoy, A A

    2010-11-28

    The high-frequency region was used to record the absorption spectrum of water in nanoscale pores during vacuum pumping or injection of water. The wide spectral range, which included the vibration overtones, allowed to resolve the structure of the absorption bands with variation of water concentration in the pores of SiO(2). The absorption bands of water clusters in the 4570-5400 cm(-1) range consist of well-resolved sub-bands with interpeak intervals of up to 580 cm(-1). When the pore diameter is decreased from 11.8 to 2.6 nm, the absorption bands of clusters in this frequency range are shifted by 530 cm(-1) in the direction of the water monomer which indicates an increase of hydrogen bond strength in confined water with an increase of the pore diameter. The spectrum recorded during water pumping is extremely variable in time, and the cluster dynamics in large pores (11.8 nm) differs greatly from the dynamics in small pores (2.6 nm). While all types of water clusters are removed from small pores uniformly, in the case of large pores, the water clusters relating to strong hydrogen bonds are removed from the sample at the beginning of the vacuum pumping and the loosely coupled clusters are removed later. The rate of this process is not steady and varies throughout pumping.

  17. The origin of blueshifted absorption features in the X-ray spectrum of PG 1211+143: outflow or disc

    NASA Astrophysics Data System (ADS)

    Gallo, L. C.; Fabian, A. C.

    2013-07-01

    In some radio-quiet active galactic nuclei (AGN), high-energy absorption features in the X-ray spectra have been interpreted as ultrafast outflows (UFOs) - highly ionized material (e.g. Fe XXV and Fe XXVI) ejected at mildly relativistic velocities. In some cases, these outflows can carry energy in excess of the binding energy of the host galaxy. Needless to say, these features demand our attention as they are strong signatures of AGN feedback and will influence galaxy evolution. For the same reason, alternative models need to be discussed and refuted or confirmed. Gallo and Fabian proposed that some of these features could arise from resonance absorption of the reflected spectrum in a layer of ionized material located above and corotating with the accretion disc. Therefore, the absorbing medium would be subjected to similar blurring effects as seen in the disc. A priori, the existence of such plasma above the disc is as plausible as a fast wind. In this work, we highlight the ambiguity by demonstrating that the absorption model can describe the ˜7.6 keV absorption feature (and possibly other features) in the quasar PG 1211+143, an AGN that is often described as a classic example of a UFO. In this model, the 2-10 keV spectrum would be largely reflection dominated (as opposed to power law dominated in the wind models) and the resonance absorption would be originating in a layer between about 6 and 60 gravitational radii. The studies of such features constitute a cornerstone for future X-ray observatories like Astro-H and Athena+. Should our model prove correct, or at least important in some cases, then absorption will provide another diagnostic tool with which to probe the inner accretion flow with future missions.

  18. Ultraviolet (250-550  nm) absorption spectrum of pure water.

    PubMed

    Mason, John D; Cone, Michael T; Fry, Edward S

    2016-09-01

    Data for the spectral light absorption of pure water from 250 to 550 nm have been obtained using an integrating cavity made from a newly developed diffuse reflector with a very high UV reflectivity. The data provide the first scattering-independent measurements of absorption coefficients in the spectral gap between well-established literature values for the absorption coefficients in the visible (>400  nm) and UV (<200  nm). A minimum in the absorption coefficient has been observed in the UV at 344 nm; the value is 0.000811±0.000227  m-1.

  19. Matrix-Isolated Infrared Absorption Spectrum of CH2IOO Radical.

    PubMed

    Zhang, Xu; Sander, Stanley P; Cheng, Lan; Thimmakondu, Venkatesan S; Stanton, John F

    2016-01-21

    The peroxyiodomethyl radical, CH2IOO, was generated in cryogenic matrices using tandem supersonic nozzles. One hyperthermal nozzle decomposes diiodomethane (CH2I2) to generate intense beams of CH2I radicals, while the second nozzle continuously deposits O2/argon (Ar) on the matrix at 10 K. The CH2I and O2 in the Ar matrix react to produce the target peroxy radical (CH2IOO). The absorption spectra of the products are monitored with a Fourier transform infrared spectrometer. Eight of the 12 fundamental infrared bands for CH2IOO were observed in an argon matrix at 5 K. The experimental frequencies (cm(-1)) are ν3 = 1407.3, ν4 = 1230.4, ν5 = 1223.2, ν6 = 1085.3, ν7 = 919.9, ν8 = 839.9, ν9 = 567.5, and ν10 = 496.2. Additional confirmation for the vibrational assignment comes from a study of the CH2I(18)O(18)O isotopic species. The six observed frequencies (cm(-1)) for CH2I(18)O(18)O are ν3 = 1407.8, ν4 = 1228.0, ν6 = 1030.8, ν7 = 899.6, ν8 = 836.0, and ν10 = 494.6. Unlike CH2I(16)O(16)O, the ν5 and ν9 bands were not observed for CH2I(18)O(18)O. To guide the experimental analysis, ab initio calculations of the infrared spectrum based on second-order vibrational perturbation theory were performed using force fields computed with relativistic coupled-cluster methods. The experimental frequencies are shown to be in good agreement with the computed fundamental frequencies except for ν9 (for CH2IOO) and ν10 (for CH2I(18)O(18)O). Our findings were compared with the study by Lee and Lee conducted in a para-H2 matrix. The fundamental frequencies are in good agreement (within 6 cm(-1)) except for the two low-frequency modes, ν9 (for CH2IOO) and ν10 (for CH2I(18)O(18)O) likely due to different matrix shifts for para-H2 and Ar matrices. In addition, our calculations are in somewhat better agreement with the experiment values than the calculations by Lee and Lee. Our study also shows that reaction CH2I + O2 produces the peroxy radical CH2IOO in cold matrices (10

  20. [Ultraviolet absorption spectrum analysis and identification of medicinal plants of Paris].

    PubMed

    Zhang, Jin-yu; Wang, Yuan-zhong; Zhao, Yan-li; Yang, Shao-bing; Zhang, Ji; Yuan, Tian-jun; Wang, Jia-jun; Jin, Hang

    2012-08-01

    Species of Paris are important medicinal plants of China. They possess anticancer, hot alexipharmic, detumescence, acesodyne, and arrest blood and remove blood stasis effects. They are the main raw material for several Chinese patent drugs such as "Yunnan Baiyao", "Gong Xue Ning", "Re Du Qing" and "Ji De Sheng Sheyaopian". The present paper, through optimizing the chloroform, absolute ethyl alcohol and water extraction condition of Paris by orthogonal test L3(4) (16), using mean value, smoothness and second differential methods on the observed UV spectrum, to inspects the RSD of stability and repeatability of different waveband. By SIMCA and the common and variant peak ratio dual index sequence analysis method, it evaluated the quality and quantity of Paris. The results showed that at the time of 50, 40 and 50 min, chloroform, absolute ethyl alcohol and water had the highest extraction ratios. Within 20 h, the RSDs of stability were 0.06-1.88, 0.05-2.42 and 0.03-0.35; the RSDs of accuracy were 0-1.48, 0.05-0.37 and 0.09-0.44; and the RSDs of repeatability were 0-1.23, 0.04-0.30 and 0.12-0.25 respectively. The qualitative analysis revealed large differences between different Paris species and different areas. The quantitative analysis indicated that the highest common peak ratio among the Paris samples was 80.00% and the lowest variant peak ratio was 6.25%. The method evaluated Paris of different species and from different producing areas, and also quantitatively assessed the arbitrary two samples, clarified the similarity between the species and areas of Paris, which provided basis of distinguishing the real and false, identification of variety and quality evaluation for Chinese herbal medicine.

  1. Absorption Spectrum of the Green Fluorescent Protein Chromophore Anion In Vacuo

    NASA Astrophysics Data System (ADS)

    Nielsen, S. B.; Lapierre, A.; Andersen, J. U.; Pedersen, U. V.; Tomita, S.; Andersen, L. H.

    2001-11-01

    A sensitive photoabsorption technique for studies of gas-phase biomolecules has been used at the ELISA electrostatic heavy-ion storage ring. We show that the anion form of the chromophore of the green fluorescent protein in vacuo has an absorption maximum at 479 nm, which coincides with one of the two absorption peaks of the protein. Its absorption characteristics are therefore ascribed to intrinsic chemical properties of the chromophore. Evidently, the special β-can structure of the protein provides shielding of the chromophore from the surroundings without significantly changing the electronic structure of the chromophore through interactions with amino acid side chains.

  2. Satellite and Ground-based Radiometers Reveal Much Lower Dust Absorption of Sunlight than Used in Climate Models

    NASA Technical Reports Server (NTRS)

    Kaufman, Y. J.; Tanre, D.; Dubovik, O.; Karnieli, A.; Remer, L. A.; Einaudi, Franco (Technical Monitor)

    2000-01-01

    The ability of dust to absorb solar radiation and heat the atmosphere is one of the main uncertainties in climate modeling and the prediction of climate change. Dust absorption is not well known due to limitations of in situ measurements. New techniques to measure dust absorption are needed in order to assess the impact of dust on climate. Here we report two new independent remote sensing techniques that provide sensitive measurements of dust absorption. Both are based on remote sensing. One uses satellite spectral measurements, the second uses ground based sky measurements from the AERONET network. Both techniques demonstrate that Saharan dust absorption of solar radiation is several times smaller than the current international standards. Dust cooling of the earth system in the solar spectrum is therefore significantly stronger than recent calculations indicate. We shall also address the issue of the effects of dust non-sphericity on the aerosol optical properties.

  3. Experimental and Ab Initio Studies of the HDO Absorption Spectrum in the 13165-13500 1/cm Spectral Region

    NASA Technical Reports Server (NTRS)

    Schwenke, David; Naumenko, Olga; Bertseva, Elena; Campargue, Alain; Arnold, James O. (Technical Monitor)

    2000-01-01

    The HDO absorption spectrum has been recorded in the 13165 - 13500 cm(exp-1) spectral region by Intracavity Laser Absorption Spectroscopy. The spectrum (615 lines), dominated by the 2n2 + 3n3 and n1+3n3 bands was assigned and modeled leading to the derivation of 196 accurate energy levels of the (103) and (023) vibrational states. Finally, 150 of these levels have been reproduced by an effective Hamiltonian involving two vibrational dark states interacting with the (023) and ( 103) bright states. The rms deviation achieved by variation of 28 parameters is 0.05-1 cm, compared to an averaged experimental uncertainty of 0.007-1 cm, indicating the limit of validity of the effective Hamiltonian approach for HDO at high vibrational excitation. The predictions of previous ab initio calculations of the HDO spectrum were extensively used in the assignment process. The particular spectral region under consideration has been used to test and discuss the improvements of new ab initio calculations recently performed on the basis of the same potential energy surface but with an improved dipole moment surface. The improvements concern both the energy levels and the line intensities. In particular, the strong hybrid character of the n1+3n3 band is very well accounted for by the the new ab initio calculations.

  4. Ultrafast transient absorption spectrum of the room temperature Ionic liquid 1-hexyl-3-methylimidazolium bromide: Confounding effects of photo-degradation

    NASA Astrophysics Data System (ADS)

    Musat, Raluca M.; Crowell, Robert A.; Polyanskiy, Dmitriy E.; Thomas, Marie F.; Wishart, James F.; Katsumura, Yosuke; Takahashi, Kenji

    2015-12-01

    The photochemistry of the charge transfer (CT) band of the room temperature ionic liquid (RTIL) 1-hexyl-3-methylimidazolium bromide (HMIm+/Br-) is investigated using near-IR to vis ultrafast transient absorption (TA) and steady-state UV absorption spectroscopies. Continuous irradiation of the CT band at 266 nm results in the formation of photo-products that absorb strongly at 266 nm. It is shown that these photo-products, which are apparently very stable, adversely affect ultrafast TA measurements. Elimination of these effects reveals at least two transient species that exist within the TA detection window of 100 fs to 3 ns and 500-1250 nm. One of the components is a short-lived (<1 ps) species that absorbs at 1080 nm. The second band exhibits a multicomponent spectrum that is very broad with an absorption maximum around 600 nm and a lifetime that is longer than the 3 ns window of our TA spectrometer. Within the signal to noise ratio of the TA spectrometer little to no solvated electron is generated by the CT mechanism.

  5. The intervening and associated O VI absorption-line systems in the ultraviolet spectrum of H1821+643

    NASA Astrophysics Data System (ADS)

    Savage, Blair D.; Tripp, Todd M.; Lu, Limin

    1998-02-01

    GHRS and FOS ultraviolet spectra of the bright QSO H1821+643 reveal the presence of strong O VI 1031.93, 1037.62 A absorption systems at z(abs) = 0.225 and 0.297, the latter being at the redshift of the QSO itself. Ground-based galaxy redshift measurements by us and others reveal two emission-line galaxies near the redshift of the intervening system at z(abs) = 0.225, suggesting the existence of a galaxy group at this redshift. The intervening O VI absorption system is also detected in H I but is not detected in the lines of Si II, Si IV, C IV, or N V. These ionization characteristics can be explained by a low-density, extended diffuse gas distribution that is photoionized by the metagalactic UV background if the gas has a metallicity of 0.1 times solar. Such a photoionized gas may be associated with the extended halo of the luminous intervening spiral galaxy at a projected distance of 100 h kpc, or with an intragroup medium. Alternatively, the absorption may be produced in hot collisionally ionized halo gas or in a hot intragroup medium. The associated system with z(abs) = 0.297 contains narrow and broad O VI absorption. The narrow absorption, which is also detected in H I, C III, C IV, and Si IV, can be modeled as gas photoionized by H1821+643 with roughly solar abundances. This gas is probably situated close to H1821+643. The broad O VI absorption that is centered at the emission redshift of H1821+643 may represent a weak and narrow example of the broad absorption line phenomena.

  6. Surface vs. atmospheric origin of 2.1-2.5 micron absorption features in the Martian spectrum

    NASA Technical Reports Server (NTRS)

    Bell, James F., III; Crisp, David

    1992-01-01

    For 20 years the origin of subtle absorption features in the spectrum of Mars near 2.3 micro-m ('K' band: 1.9-2.5 micro-m) has been debated. This spectral region contains gaseous absorption features predominantly from CO2 and CO on Mars and from telluric H2O and CO2. The authors have obtained new higher spectral resolution telescopic K band spectra of 10 surface regions using the Infrared Telescope Facility (IRTF) at Mauna Kea during 1990. The goals were to confirm the existence of broad features seen at lower spectral resolution and to determine whether these bands are caused by atmospheric gases, surface (or airborne dust) minerals, or a combination of both.

  7. Absorption Spectrum of a Ru(II)-Aquo Complex in Vacuo: Resolving Individual Charge-Transfer Transitions.

    PubMed

    Xu, Shuang; Weber, J Mathias

    2015-11-25

    Ruthenium(II) complexes are of great interest as homogeneous catalysts and as photosensitizers; however, their absorption spectra are typically very broad and offer only little insight into their electronic structure. We present the electronic spectrum of the aquo complex [(trpy)(bipy)Ru(II)-OH2](2+) measured by photodissociation spectroscopy of mass-selected ions in vacuo (bipy = 2,2'-bipyridine and trpy = 2,2':6',2″-terpyridine). In the visible and near-UV, [(trpy)(bipy)Ru(II)-OH2](2+) has several electronic bands that are not resolved in absorption spectra of this complex in solution but are partially resolved in vacuo. The experimental results are compared with results from time-dependent density functional theory calculations.

  8. A close to unity and all-solar-spectrum absorption by ion-sputtering induced Si nanocone arrays.

    PubMed

    Qiu, Ying; Hao, Hong-Chen; Zhou, Jing; Lu, Ming

    2012-09-24

    Si nanocone arrays are formed on Si(100) by Ar(+) ion sputtering combined with metal ion co-deposition. The aspect ratio of Si cone is found to increases steadily with increasing sample temperature, but decreases slowly with increasing ion dose. Furthermore, the height and base diameter of Si cone increase monotonously with increasing dose at a constant temperature. The absorptivity increases in general with increasing aspect ratio and height. A close to unity and all-solar-spectrum absorption by the nanostructured Si is finally achieved, with the absorbance for λ = 350 to 1100 nm being higher than 96%, and that for λ = 1100 to 2000 nm higher than 92%. Photocurrents for different Si samples are also investigated.

  9. A photon counting and a squeezing measurement method by the exact absorption and dispersion spectrum of Λ-type Atoms.

    PubMed

    Naeimi, Ghasem; Alipour, Samira; Khademi, Siamak

    2016-01-01

    Recently, the master equations for the interaction of two-mode photons with a three-level Λ-type atom are exactly solved for the coherence terms. In this paper the exact absorption spectrum is applied for the presentation of a non-demolition photon counting method, for a few number of coupling photons, and its benefits are discussed. The exact scheme is also applied where the coupling photons are squeezed and the photon counting method is also developed for the measurement of the squeezing parameter of the coupling photons.

  10. [Application of the differential absorption UV-VIS spectrum to assay some of humic compounds in therapeutic peats].

    PubMed

    Drobnik, Michał; Latour, Teresa

    2009-01-01

    Delineated were differential 4th degree absorption spectrum UV-VIS range for standardized humid acids produced by "Fluka". These acids were separated through selective extraction (acid, alcoholic, alkaline). Determined was wavelength for which distinct, well separated, symmetrical peaks characteristic for particular compounds were found. The similar procedure were applied to separate the same sort of acids extracted from 4 Polish peat deposits. Certified are the presence of hymatomelanoic acid, fulvic acid, humic acid in examined peat of low type. These acids occurred in different quantity and proportions.

  11. UV absorption spectrum of the ClO dimer (Cl2O2) between 200 and 420 nm.

    PubMed

    Papanastasiou, Dimitrios K; Papadimitriou, Vassileios C; Fahey, David W; Burkholder, James B

    2009-12-10

    The UV photolysis of Cl(2)O(2) (dichlorine peroxide) is a key step in the catalytic destruction of polar stratospheric ozone. In this study, the gas-phase UV absorption spectrum of Cl(2)O(2) was measured using diode array spectroscopy and absolute cross sections, sigma, are reported for the wavelength range 200-420 nm. Pulsed laser photolysis of Cl(2)O at 248 nm or Cl(2)/Cl(2)O mixtures at 351 nm at low temperature (200-228 K) and high pressure (approximately 700 Torr, He) was used to produce ClO radicals and subsequently Cl(2)O(2) via the termolecular ClO self-reaction. The Cl(2)O(2) spectrum was obtained from spectra recorded following the completion of the gas-phase ClO radical chemistry. The spectral analysis used observed isosbestic points at 271, 312.9, and 408.5 nm combined with reaction stoichiometry and chlorine mass balance to determine the Cl(2)O(2) spectrum. The Cl(2)O(2) UV absorption spectrum peaks at 244.5 nm with a cross section of 7.6(-0.5)(+0.8) x 10(-18) cm(2) molecule(-1) where the quoted error limits are 2sigma and include estimated systematic errors. The Cl(2)O(2) absorption cross sections obtained for wavelengths in the range 300-420 nm are in good agreement with the Cl(2)O(2) spectrum reported previously by Burkholder et al. (J. Phys. Chem. A 1990, 94, 687) and significantly higher than the values reported by Pope et al. (J. Phys. Chem. A 2007, 111, 4322). A possible explanation for the discrepancy in the Cl(2)O(2) cross section values with the Pope et al. study is discussed. Representative, atmospheric photolysis rate coefficients are calculated and a range of uncertainty estimated based on the determination of sigma(Cl(2)O(2))(lambda) in this work. Although improvements in our fundamental understanding of the photochemistry of Cl(2)O(2) are still desired, this work indicates that major revisions in current atmospheric chemical mechanisms are not required to simulate observed polar ozone depletion.

  12. [Study on transient absorption spectrum of tungsten nanoparticle with HepG2 tumor cell].

    PubMed

    Cao, Lin; Shu, Xiao-Ning; Liang, Dong; Wang, Cong

    2014-07-01

    Significance of this study lies in tungsten nano materials can be used as a preliminary innovative medicines applied basic research. This paper investigated the inhibition of tungsten nanoparticles which effected on human hepatoma HepG2 cells by MTT. The authors use transient absorption spectroscopy (TAS) technology absorption and emission spectra characterization of charge transfer between nanoparticles and tumor cell. The authors discussed the role of the tungsten nanoparticles in the tumor early detection of the disease and its anti-tumor properties. In the HepG2 experiments system, 100-150 microg x mL(-1) is the best drug concentration of anti-tumor activity which recact violently within 6 hours and basically completed in 24 hours. The results showed that transient absorption spectroscopy can be used as tumor detection methods and characterization of charge transfer between nano-biosensors and tumor cells. Tungsten nanoparticles have potential applications as anticancer drugs.

  13. Molecular level all-optical logic with chlorophyll absorption spectrum and polarization sensitivity

    NASA Astrophysics Data System (ADS)

    Raychaudhuri, B.; Bhattacharyya (Bhaumik), S.

    2008-06-01

    Chlorophyll is suggested as a suitable medium for realizing optical Boolean logic at the molecular level in view of its wavelength-selective property and polarization sensitivity in the visible region. Spectrophotometric studies are made with solutions of total chlorophyll and chromatographically isolated components, viz. chlorophyll a and b and carotenoids extracted from pumpkin leaves of different maturity stages. The absorption features of matured chlorophyll with two characteristic absorption peaks and one transmission band are molecular properties and independent of concentration. A qualitative explanation of such an absorption property is presented in terms of a ‘particle in a box’ model and the property is employed to simulate two-input optical logic operations. If both of the inputs are either red or blue, absorption is high. If either one is absent and replaced by a wavelength of the transmission band, e.g. green, absorption is low. Assigning these values as 0 s or 1 s, AND and OR operations can be performed. A NOT operation can be simulated with the transmittance instead of the absorbance. Also, the shift in absorbance values for two different polarizations of the same monochromatic light can simulate two logical states with a single wavelength. Cyclic change in absorbance is noted over a rotation of 360° for both red and blue peaks, although the difference is not very large. Red monochromatic light with polarizations apart by 90°, corresponding to maximum and minimum absorption, respectively, may be assigned as the two logical states. The fluorescence emissions for different pigment components are measured at different excitation wavelengths and the effect of fluorescence on the red absorbance is concluded to be negligible.

  14. Refinement of the ice absorption spectrum in the visible using radiance profile measurements in Antarctic snow

    NASA Astrophysics Data System (ADS)

    Picard, Ghislain; Libois, Quentin; Arnaud, Laurent

    2016-11-01

    Ice is a highly transparent material in the visible. According to the most widely used database (IA2008; Warren and Brandt, 2008), the ice absorption coefficient reaches values lower than 10-3 m-1 around 400 nm. These values were obtained from a vertical profile of spectral radiance measured in a single snow layer at Dome C in Antarctica. We reproduced this experiment using an optical fiber inserted in the snow to record 56 profiles from which 70 homogeneous layers were identified. Applying the same estimation method on every layer yields 70 ice absorption spectra. They present a significant variability but absorption coefficients are overall larger than IA2008 by 1 order of magnitude at 400-450 nm. We devised another estimation method based on Bayesian inference that treats all the profiles simultaneously. It reduces the statistical variability and confirms the higher absorption, around 2 × 10-2 m-1 near the minimum at 440 nm. We explore potential instrumental artifacts by developing a 3-D radiative transfer model able to explicitly account for the presence of the fiber in the snow. The simulation shows that the radiance profile is indeed perturbed by the fiber intrusion, but the error on the ice absorption estimate is not larger than a factor of 2. This is insufficient to explain the difference between our new estimate and IA2008. The same conclusion applies regarding the plausible contamination by black carbon or dust, concentrations reported in the literature are insufficient. Considering the large number of profiles acquired for this study and other estimates from the Antarctic Muon and Neutrino Detector Array (AMANDA), we nevertheless estimate that ice absorption values around 10-2 m-1 at the minimum are more likely than under 10-3 m-1. A new estimate in the range 400-600 nm is provided for future modeling of snow, cloud, and sea-ice optical properties. Most importantly, we recommend that modeling studies take into account the large uncertainty of the ice

  15. Would the solvent effect be the main cause of band shift in the theoretical absorption spectrum of large lanthanide complexes?

    NASA Astrophysics Data System (ADS)

    Freire, Ricardo O.; Rodrigues, Nailton M.; Rocha, Gerd B.; Gimenez, Iara F.; da Costa Junior, Nivan B.

    2011-06-01

    As most reactions take place in solution, the study of solvent effects on relevant molecular properties - either by experimental or theoretical methods - is crucial for the design of new processes and prediction of technological properties. In spite of this, only few works focusing the influence of the solvent nature specifically on the spectroscopic properties of lanthanide complexes can be found in the literature. The present work describes a theoretical study of the solvent effect on the prediction of the absorption spectra for lanthanide complexes, but other possible relevant factors have been also considered such as the molecular geometry and the excitation window used for interaction configuration (CI) calculations. The [Eu(ETA) 2· nH 2O] +1 complex has been chosen as an ideal candidate for this type of study due to its small number of atoms (only 49) and also because the absorption spectrum exhibits a single band. Two Monte Carlo simulations were performed, the first one considering the [Eu(ETA) 2] +1 complex in 400 water molecules, evidencing that the complex presents four coordinated water molecules. The second simulation considered the [Eu(ETA) 2·4H 2O] +1 complex in 400 ethanol molecules, in order to evaluate the solvent effect on the shift of the maximum absorption in calculated spectra, compared to the experimental one. Quantum chemical studies were also performed in order to evaluate the effect of the accuracy of calculated ground state geometry on the prediction of absorption spectra. The influence of the excitation window used for CI calculations on the spectral shift was also evaluated. No significant solvent effect was found on the prediction of the absorption spectrum for [Eu(ETA) 2·4H 2O] +1 complex. A small but significant effect of the ground state geometry on the transition energy and oscillator strength was also observed. Finally it must be emphasized that the absorption spectra of lanthanide complexes can be predicted with great accuracy

  16. Use of Microcomputers in the Undergraduate Chemistry Laboratory: An Absorption Spectrum Experiment.

    ERIC Educational Resources Information Center

    Terry, Ronald J.; And Others

    1989-01-01

    Describes a computer program designed to enable undergraduate students to apply computer skills for data acquisition and processing in experimental chemistry. An example is given that examines the absorption spectra of conjugated molecules such as carbocyanine dyes, and the free electron model is explained. (six references) (LRW)

  17. Photodissociation of carbon dioxide in singlet valence electronic states. II. Five state absorption spectrum and vibronic assignment.

    PubMed

    Grebenshchikov, Sergy Yu

    2013-06-14

    The absorption spectrum of CO2 in the wavelength range 120-160 nm is analyzed by means of quantum mechanical calculations performed using vibronically coupled potential energy surfaces of five singlet valence electronic states and the coordinate dependent transition dipole moment vectors. The thermally averaged spectrum, calculated for T = 190 K via Boltzmann averaging of optical transitions from many initial rotational states, accurately reproduces the experimental spectral envelope, consisting of a low and a high energy band, the positions of the absorption maxima, their FWHMs, peak intensities, and frequencies of diffuse structures in each band. Contributions of the vibronic interactions due to Renner-Teller coupling, conical intersections, and the Herzberg-Teller effect are isolated and the calculated bands are assigned in terms of adiabatic electronic states. Finally, diffuse structures in the calculated bands are vibronically assigned using wave functions of the underlying resonance states. It is demonstrated that the main progressions in the high energy band correspond to consecutive excitations of the pseudorotational motion along the closed loop of the CI seam, and progressions differ in the number of nodes along the radial mode perpendicular to the closed seam. Irregularity of the diffuse peaks in the low energy band is interpreted as a manifestation of the carbene-type "cyclic" OCO minimum.

  18. A plethora of diffuse steep spectrum radio sources in Abell 2034 revealed by LOFAR

    NASA Astrophysics Data System (ADS)

    Shimwell, T. W.; Luckin, J.; Brüggen, M.; Brunetti, G.; Intema, H. T.; Owers, M. S.; Röttgering, H. J. A.; Stroe, A.; van Weeren, R. J.; Williams, W. L.; Cassano, R.; de Gasperin, F.; Heald, G. H.; Hoang, D. N.; Hardcastle, M. J.; Sridhar, S. S.; Sabater, J.; Best, P. N.; Bonafede, A.; Chyży, K. T.; Enßlin, T. A.; Ferrari, C.; Haverkorn, M.; Hoeft, M.; Horellou, C.; McKean, J. P.; Morabito, L. K.; Orrù, E.; Pizzo, R.; Retana-Montenegro, E.; White, G. J.

    2016-06-01

    With Low-Frequency Array (LOFAR) observations, we have discovered a diverse assembly of steep spectrum emission that is apparently associated with the intracluster medium (ICM) of the merging galaxy cluster Abell 2034. Such a rich variety of complex emission associated with the ICM has been observed in few other clusters. This not only indicates that Abell 2034 is a more interesting and complex system than previously thought but it also demonstrates the importance of sensitive and high-resolution, low-frequency observations. These observations can reveal emission from relativistic particles which have been accelerated to sufficient energy to produce observable emission or have had their high energy maintained by mechanisms in the ICM. The most prominent feature in our maps is a bright bulb of emission connected to two steep spectrum filamentary structures, the longest of which extends perpendicular to the merger axis for 0.5 Mpc across the south of the cluster. The origin of these objects is unclear, with no shock detected in the X-ray images and no obvious connection with cluster galaxies or AGNs. We also find that the X-ray bright region of the cluster coincides with a giant radio halo with an irregular morphology and a very steep spectrum. In addition, the cluster hosts up to three possible radio relics, which are misaligned with the cluster X-ray emission. Finally, we have identified multiple regions of emission with a very steep spectral index that seem to be associated with either tailed radio galaxies or a shock.

  19. Contribution of a visual pigment absorption spectrum to a visual function: depth perception in a jumping spider.

    PubMed

    Nagata, Takashi; Arikawa, Kentaro; Terakita, Akihisa

    2013-01-01

    Absorption spectra of visual pigments are adaptively tuned to optimize informational capacity in most visual systems. Our recent investigation of the eyes of the jumping spider reveals an apparent exception: the absorption characteristics of a visual pigment cause defocusing of the image, reducing visual acuity generally in a part of the retina. However, the amount of defocus can theoretically provide a quantitative indication of the distance of an object. Therefore, we proposed a novel mechanism for depth perception in jumping spiders based on image defocus. Behavioral experiments revealed that the depth perception of the spider depended on the wavelength of the ambient light, which affects the amount of defocus because of chromatic aberration of the lens. This wavelength effect on depth perception was in close agreement with theoretical predictions based on our hypothesis. These data strongly support the hypothesis that the depth perception mechanism of jumping spiders is based on image defocus.

  20. Interstellar Absorption Lines in the Spectrum of the Starburst Galaxy NGC 1705

    NASA Astrophysics Data System (ADS)

    Sahu, M. S.

    1998-09-01

    A Goddard High Resolution Spectrograph archival study of the interstellar absorption lines in the line of sight to the H i-rich, starburst dwarf galaxy NGC 1705 in the 1170 to 1740 Å range at ~120 km s^-1 resolution is presented. The absorption features arising because of photospheric lines are distinctly different from the interstellar lines: the photospheric lines are weak, broad (equivalent widths >1 Å), asymmetric, and centered around the systemic LSR velocity of NGC 1705 (~610 km s^-1). The interstellar lines consist of three relatively narrow components at LSR velocities of -20, 260, and 540 km s^-1, and include absorption by neutral atoms (N i lambda1200 triplet and O i lambda1302), singly ionized atoms (Si ii lambdalambda1190, 1193, 1260, 1304, and 1526, S ii lambda1253, C ii lambda1334, C ii^* lambda1336, Fe ii lambda1608, and Al ii lambda1670), and atoms in higher ionization states (Si iii lambda1206, Si iv lambdalambda1393, 1402, and C iv lambdalambda1548, 1550). The Si iv and C iv absorption features have both interstellar and photospheric contributions. In an earlier study, Sahu & Blades identified the absorption system at -20 km s^-1 with Milky Way disk/halo gas, and the 260 km s^-1 system with a small, isolated high-velocity cloud HVC 487, which is probably associated with Magellanic Stream gas. The 540 km s^-1 absorption system is associated with a kiloparsec-scale expanding, ionized supershell centered on the super-star cluster NGC 1705-1. The analysis presented in this paper consists of (1) a list of all interstellar absorption features with greater than 3 sigma significance and their measured equivalent widths, (2) plots of the lines in the various atomic species together with the results of nonlinear least-squares fit profiles to the observed data, and (3) unpublished 21 cm maps from the Wakker & van Woerden survey showing the large-scale H i distribution in the region near the NGC 1705 sight line and HVC 487. Furthermore, weak N i lambda1200

  1. Visible-band (390-940nm) monitoring of the Pluto absorption spectrum during the New Horizons encounter

    NASA Astrophysics Data System (ADS)

    Smith, Robert J.; Marchant, Jonathan M.

    2015-11-01

    Whilst Earth-based observations obviously cannot compete with New Horizons’ on-board instrumentation in most regards, the New Horizons data set is essentially a snapshot of Pluto in July 2015. The New Horizons project team therefore coordinated a broad international observing campaign to provide temporal context and to take advantage of the once-in-a-lifetime opportunity to directly link our Earth-based view of Pluto with “ground truth” provided by in situ measurements. This both adds value to existing archival data sets and forms the basis of long term, monitoring as we watch Pluto recede from the Sun over the coming years. We present visible-band (390-940nm) monitoring of the Pluto absorption spectrum over the period July - October 2015 from the Liverpool Telescope (LT). In particular we wished to understand the well-known 6-day fluctuation in the methane ice absorption spectrum which is observable from Earth in relation to the never-before-available high resolution maps of the Pluto surface. The LT is a fully robotic 2.0m optical telescope that automatically and dynamically schedules observations across 30+ observing programmes with a broad instrument suite. It is ideal for both reactive response to dynamic events (such as the fly-by) and long term, stable monitoring with timing constraints individually optimised to the science requirements of each programme. For example past studies of the observed CH4 absorption variability have yielded ambiguity of whether they were caused by real physical changes or geometric observation constraints, in large part because of the uneven time sampling imposed by traditional telescope scheduling.

  2. Absorption Spectrum of Phytoplankton Pigments Derived from Hyperspectral Remote-Sensing Reflectance

    DTIC Science & Technology

    2004-01-01

    For a data set collected around Baja California with chlorophyll-a concentration ((chl-a)) ranging from 0.16 to 11.3 mg/cubic meter, hyperspectral absorption spectra of phytoplankton pigments were independently inverted from hyperspectral remote - sensing reflectance using a newly...potential of using hyperspectral remote sensing to retrieve both chlorophyll-a and other accessory pigments. (7 figures, 47 refs.)

  3. [Determination of enthalpy change of coordinating color reaction by UV-Vis absorption spectrum method].

    PubMed

    Yang, D; An, L; Chen, L

    2001-08-01

    In this paper, a simple experimental method for the determination of enthalpy change of coordinating color reaction has been proposed and a relation formula between absorption and temperature has been deduced. Using coordinating color reaction of cobalt(II) thiocyanate in Tween-80 medium, the linear relation of this formula has been validated: r = 0.9957 and delta H = -44.7 kJ.mol-1, which is accordant with the result obtained from Van't Hoff equation.

  4. Absorption-line spectrum of GC 1556 + 335 - ejected or intervening material

    SciTech Connect

    Morris, S.L.; Weymann, R.J.; Foltz, C.B.; Turnshek, D.A.; Shectman, S.

    1986-11-01

    Two rich C IV absorption complexes in the radio-loud QSO GC 1556 + 335 are described. Column densities for seven of the redshift systems in these complexes are measured, and limits on the distances between the QSO and absorbing clouds are derived using ionization parameters estimated from matching photoionization models to the observations and a density estimated from an upper limit to the C II(asterisk) column density in the z = 1.65367 redshift system. These limits show that GC 1556 + 335 is not a typical member of the BALQSO class. Two alternative models are discussed in which the absorption complexes are caused by material either entrained into a radio jet from the QSO or contained in two clusters of galaxies along the line of sight. It is suggested that the emission associated with the complexes may be detectable, and that a study of the velocity field and geometry of such emission might be decisive in determining the mechanism responsible for the absorption. 40 references.

  5. [The development of acetylene on-line monitoring technology based on laser absorption spectrum].

    PubMed

    He, Ying; Zhang, Yu-jun; Kan, Rui-feng; Xia, Hui; Wang, Min; Cui, Xiao-juan; Chen, Jiu-ying; Chen, Dong; Liu, Wen-qing; Liu, Jian-guo

    2008-10-01

    As one of the materials in organic chemical industry, acetylene has been used in many aspects of chemical industry. But acetylene is a very dangerous inflammable and explosive gas, so it needs in-situ monitoring during industrial storage and production. Tunable diode laser absorption spectroscopy (TDLAS) technology has been widely used in atmospheric trace gases detection, because it has a lot of advantageous characteristics, such as high sensitivity, good selectivity, and rapid time response. The distribution characteristics of absorption lines of acetylene in near infrared band were studied, and then the system designing scheme of acetylene on-line monitoring based on near infrared tunable diode laser absorption spectroscopy technology was discussed in detail. Moreover, the system of experiment measurement was set up and the method of signal detection and the algorithm of concentration inversion were studied. In addition, the sample cell with a path length of 10 cm, and the acetylene of different known concentrations were measured. As a result, the detection limit obtained reached 1.46 cm3 x m(-3). Finally the dynamic detection experiment was carried out, and the measurement result is stable and reliable, so the design of the system is practicable through experiment analysis. On-line acetylene leakage monitoring system was developed based on the experiment, and it is suitable for giving a leakage alarm of acetylene during its storage, transportation and use.

  6. High-resolution, vacuum-ultraviolet absorption spectrum of boron trifluoride.

    PubMed

    Hughes, Patrick P; Beasten, Amy; McComb, Jacob C; Coplan, Michael A; Al-Sheikhly, Mohamad; Thompson, Alan K; Vest, Robert E; Sprague, Matthew K; Irikura, Karl K; Clark, Charles W

    2014-11-21

    In the course of investigations of thermal neutron detection based on mixtures of (10)BF3 with other gases, knowledge was required of the photoabsorption cross sections of (10)BF3 for wavelengths between 135 and 205 nm. Large discrepancies in the values reported in existing literature led to the absolute measurements reported in this communication. The measurements were made at the SURF III Synchrotron Ultraviolet Radiation Facility at the National Institute of Standards and Technology. The measured absorption cross sections vary from 10(-20) cm(2) at 135 nm to less than 10(-21) cm(2) in the region from 165 to 205 nm. Three previously unreported absorption features with resolvable structure were found in the regions 135-145 nm, 150-165 nm, and 190-205 nm. Quantum mechanical calculations, using the TD-B3LYP/aug-cc-pVDZ variant of time-dependent density functional theory implemented in Gaussian 09, suggest that the observed absorption features arise from symmetry-changing adiabatic transitions.

  7. Solvent dependence of structure, charge distribution, and absorption spectrum in the photochromic merocyanine-spiropyran pair.

    PubMed

    Murugan, N Arul; Chakrabarti, Swapan; Ågren, Hans

    2011-04-14

    We have studied the structures and absorption spectra of merocyanine, the photoresponsive isomer of the spiropyran (SP)-merocyanine (MC) pair, in chloroform and in water solvents using a combined hybrid QM/MM Car-Parrinello molecular dynamics (CP-QM/MM) and ZINDO approach. We report remarkable differences in the molecular structure and charge distribution of MC between the two solvents; the molecular structure of MC remains in neutral form in chloroform while it becomes charge-separated, zwitterionic, in water. The dipole moment of MC in water is about 50% larger than in chloroform, while the value for SP in water is in between, suggesting that the solvent is more influential than the conformation itself in deciding the dipole moment for the merocyanine-spiropyran pair. The calculations could reproduce the experimentally reported blue shift in the absorption spectra of MC when going from the nonpolar to the polar solvent, though the actual value of the absorption maximum is overestimated in chloroform solvent. We find that the CP-QM/MM approach is appropriate for structure modeling of solvatochromic and thermochromic molecules as this approach is able to capture the solvent and thermal-induced structural changes within the solute important for an accurate assessment of the properties.

  8. [Open-path online monitoring of ambient atmospheric CO2 based on laser absorption spectrum].

    PubMed

    He, Ying; Zhang, Yu-Jun; Kan, Rui-Feng; Xia, Hui; Geng, Hui; Ruan, Jun; Wang, Min; Cui, Xiao-Juan; Liu, Wen-Qing

    2009-01-01

    With the conjunction of tunable diode laser absorption spectroscopy technology (TDLAS) and the open long optical path technology, the system designing scheme of CO2 on-line monitoring based on near infrared tunable diode laser absorption spectroscopy technology was discussed in detail, and the instrument for large-range measurement was set up. By choosing the infrared absorption line of CO2 at 1.57 microm whose line strength is strong and suitable for measurement, the ambient atmospheric CO2 was measured continuously with a 30 s temporal resolution at an suburb site in the autumn of 2007. The diurnal atmospheric variations of CO2 and continuous monitoring results were presented. The results show that the variation in CO2 concentration has an obvious diurnal periodicity in suburb where the air is free of interference and contamination. The general characteristic of diurnal variation is that the concentration is low in the daytime and high at night, so it matches the photosynthesis trend. The instrument can detect gas concentration online with high resolution, high sensitivity, high precision, short response time and many other advantages, the monitoring requires no gas sampling, the calibration is easy, and the detection limit is about 4.2 x 10(-7). It has been proved that the system and measurement project are feasible, so it is an effective method for gas flux continuous online monitoring of large range in ecosystem based on TDLAS technology.

  9. Rotational structure in the near-infrared absorption spectrum of ozone

    NASA Technical Reports Server (NTRS)

    Anderson, Stuart M.; Hupalo, Peter; Mauersberger, Konrad

    1993-01-01

    The lowest energy members of the near-IR absorption bands of ozone possess fine structure which is probably due to the rotation of the molecule in the upper vibronic state, suggesting that this state is metastable. A preliminary analysis of the structures as rotational subbands supports a recent theoretical assignment of the near-IR vibronic features to the 3A2 - 1A1 electronic transition. A binding energy of about 0.1 eV is inferred from the breakoff in the observed structure.

  10. Research of fiber carbon dioxide sensing system based laser absorption spectrum

    NASA Astrophysics Data System (ADS)

    Wei, Yubin; Zhang, Tingting; Li, Yanfang; Zhao, Yanjie; Wang, Chang; Liu, Tongyu

    2012-02-01

    Carbon dioxide is one of the important gas need to be detected in coal mine safety. In the mine limited ventilation environment, Concentration of carbon dioxide directly affects the health of coal miners. Carbon dioxide is also one of important signature Gas in spontaneous combustion forecasting of coal goaf area, it is important to accurately detect concentration of carbon dioxide in coal goaf area. This paper proposed a fiber carbon dioxide online sensing system based on tunable diode laser spectroscopy. The system used laser absorption spectroscopy and optical fiber sensors combined, and a near-infrared wavelength 1608nm fiber-coupled distributed feedback laser (DFB) as a light source and a 7cm length gas cell, to achieve a high sensitivity concentration detection of carbon dioxide gas. The technical specifications of sensing system can basically meet the need of mine safety.

  11. Detection of a Deep 3-μm Absorption Feature in the Spectrum of Amalthea (JV)

    NASA Astrophysics Data System (ADS)

    Takato, Naruhisa; Bus, Schelte J.; Terada, Hiroshi; Pyo, Tae-Soo; Kobayashi, Naoto

    2004-12-01

    Near-infrared spectra of Jupiter's small inner satellites Amalthea and Thebe are similar to those of D-type asteroids in the 0.8- to 2.5-micrometer wavelength range. A deep absorption feature is detected at 3 micrometers in the spectra of the trailing side of Amalthea, which is similar to that of the non-ice components of Callisto and can be attributed to hydrous minerals. These surface materials cannot be explained if the satellite formed at its present orbit by accreting from a circumjovian nebula. Amalthea and Thebe may be the remnants of Jupiter's inflowing building blocks that formed in the outer part or outside of the circumjovian nebula.

  12. Detection of a deep 3-microm absorption feature in the spectrum of Amalthea (JV).

    PubMed

    Takato, Naruhisa; Bus, Schelte J; Terada, Hiroshi; Pyo, Tae-Soo; Kobayashi, Naoto

    2004-12-24

    Near-infrared spectra of Jupiter's small inner satellites Amalthea and Thebe are similar to those of D-type asteroids in the 0.8- to 2.5-micrometer wavelength range. A deep absorption feature is detected at 3 micrometers in the spectra of the trailing side of Amalthea, which is similar to that of the non-ice components of Callisto and can be attributed to hydrous minerals. These surface materials cannot be explained if the satellite formed at its present orbit by accreting from a circumjovian nebula. Amalthea and Thebe may be the remnants of Jupiter's inflowing building blocks that formed in the outer part or outside of the circumjovian nebula.

  13. Aerosol Absorption Retrievals from the PACE Broad Spectrum Ocean Color Instrument (OCI)

    NASA Technical Reports Server (NTRS)

    Mattoo, Shana; Remer, Lorraine A.; Levy, Robert C.; Gupta, Pawan; Ahmad, Ziauddin; Martins, J. Vanderlei; Lima, Adriana Rocha; Torres, Omar

    2016-01-01

    The PACE (Pre-­Aerosol, Clouds and ocean Ecosystem) mission, anticipated for launch in the early 2020s, is designed to characterize oceanic and atmospheric properties. The primary instrument on-­-board will be a moderate resolution (approximately 1 km nadir) radiometer, called the Ocean Color Instrument (OCI). OCI will provide high spectral resolution (5 nm) from the UV to NIR (350 - 800 nm), with additional spectral bands in the NIR and SWIR. The OCI itself is an excellent instrument for atmospheric objectives, providing measurements across a broad spectral range that in essence combines the capabilities of MODIS and OMI, but with the UV channels from OMI to be available at moderate resolution. (Image credit: PACE Science Definition Team Report). Objective: Can we make use of the UV-­SWIR measurements to derive information about aerosol absorption when aerosol loading is high?

  14. A Near-Infrared Spectrometer to Measure Zodiacal Light Absorption Spectrum

    NASA Technical Reports Server (NTRS)

    Kutyrev, A. S.; Arendt, R.; Dwek, E.; Kimble, R.; Moseley, S. H.; Rapchun, D.; Silverberg, R. F.

    2010-01-01

    We have developed a high throughput infrared spectrometer for zodiacal light fraunhofer lines measurements. The instrument is based on a cryogenic dual silicon Fabry-Perot etalon which is designed to achieve high signal to noise Fraunhofer line profile measurements. Very large aperture silicon Fabry-Perot etalons and fast camera optics make these measurements possible. The results of the absorption line profile measurements will provide a model free measure of the zodiacal Light intensity in the near infrared. The knowledge of the zodiacal light brightness is crucial for accurate subtraction of zodiacal light foreground for accurate measure of the extragalactic background light after the subtraction of zodiacal light foreground. We present the final design of the instrument and the first results of its performance.

  15. A new colorimetric and far-red fluorescent probe for hydrazine with a large red-shifted absorption spectrum.

    PubMed

    Xu, Zujun; Pang, Mengmeng; Li, Changwang; Zhu, Baocun

    2016-10-18

    Recently, growing attention has been paid to the detection of hydrazine (NH2 NH2 ) because of its important roles in industrial chemical and high toxicity to human beings. Herein, we have constructed a new colorimetric and far-red fluorescent probe containing a receptor of 4-bromobutanoate to selectively detect hydrazine. The probe could detect hydrazine quantitatively in the range of 40-500 μM with the detection limit of 2.9 μM. In addition, the probe could monitor hydrazine by the ratiometric method with a large (185 nm) red-shifted absorption spectrum, and the color changes from yellow to blue make it as a 'naked-eye' indicator for hydrazine. Consequently, our proposed probe would be of great benefit for monitoring hydrazine in aqueous solution.

  16. On the infrared absorption spectrum of the hydrated hydroxide (H3O2-) cluster anion

    NASA Astrophysics Data System (ADS)

    Peláez, Daniel; Meyer, Hans-Dieter

    2017-01-01

    In this work, we present an MCTDH simulation of the infrared (IR) spectrum of the H3O2- cluster anion and compare it to the Ar vibrational predissociation experimental one. In particular, we have focused on the 600-1900cm-1 energy region, which is the lowest energy region experimentally accessible. The computed bands have been assigned to the corresponding eigenstates. The latter have been obtained through Block Improved Relaxation calculations. An overall very good agreement between theory and experiment is achieved. However, certain discrepancies between the calculated IR and the experimental Ar vibrational predissociation one exist. We provide evidence that they are due to the influence of the attached Ar atom.

  17. Vibrational structure of n-π* transition of the UV absorption spectrum of acryloyl fluoride in the gas phase.

    PubMed

    Koroleva, Lidiya A; Tyulin, Vladimir I; Matveev, Vladimir K; Pentin, Yuriy A

    2014-03-25

    UV absorption spectrum of acryloyl fluoride molecule in the gas phase has been obtained in the region at 32600-35500 cm(-1) with the purpose of the investigation of the hindered internal rotation. The resolved vibrational structure of this spectrum consists of 92 absorption bands, each of which corresponds to a certain transition from the ground (S0) to excited (S1) electronic state. The assignment of all bands has been made. The values ν00trans=34831.8 cm(-1) and ν00cis=34679.2 cm(-1) have been determined. Several Deslandres Tables (DTs) have been constructed for torsional vibration of s-trans- and s-cis-isomers of investigated molecule. The origins in these DTs correspond to bands assigned to ν00 and to fundamental frequencies of each isomer in the S0 and S1 states. These DTs have been used to determine the harmonic frequencies ωe, anharmonicity coefficients x11, and frequencies of the torsional vibration transitions (0-υ) up to high values of the vibrational quantum number υ of s-trans- and s-cis-isomers in the both electronic states. The frequencies of torsional vibrations are ν1(″)=116.5cm(-1) for s-trans-isomer and ν1(″)=101.2 cm(-1) for s-cis-isomer in the S0 state. The frequencies of ones are ν1(')=170.4 cm(-1) for s-trans-isomer and ν1(')=139.7 cm(-1) for s-cis-isomer in the S1 state. The fundamental vibrational frequencies set has been found for isomers in the S0 and S1 states.

  18. Substituent and solvent effects on the UV-vis absorption spectrum of the photoactive yellow protein chromophore.

    PubMed

    García-Prieto, F Fernández; Aguilar, M A; Galván, I Fdez; Muñoz-Losa, A; Olivares del Valle, F J; Sánchez, M L; Martín, M E

    2015-05-28

    Solvent effects on the UV-vis absorption spectra and molecular properties of four models of the photoactive yellow protein (PYP) chromophore have been studied with ASEP/MD, a sequential quantum mechanics/molecular mechanics method. The anionic trans-p-coumaric acid (pCA(-)), thioacid (pCTA(-)), methyl ester (pCMe(-)), and methyl thioester (pCTMe(-)) derivatives have been studied in gas phase and in water solution. We analyze the modifications introduced by the substitution of sulfur by oxygen atoms and hydrogen by methyl in the coumaryl tail. We have found some differences in the absorption spectra of oxy and thio derivatives that could shed light on the different photoisomerization paths followed by these compounds. In solution, the spectrum substantially changes with respect to that obtained in the gas phase. The n → π1* state is destabilized by a polar solvent like water, and it becomes the third excited state in solution displaying an important blue shift. Now, the π → π1* and π → π2* states mix, and we find contributions from both transitions in S1 and S2. The presence of the sulfur atom modulates the solvent effect and the first two excited states become practically degenerate for pCA(-) and pCMe(-) but moderately well-separated for pCTA(-) and pCTMe(-).

  19. Highly Ionized Iron Absorption Lines from Outflowing Gases in the X-ray Spectrum of NGC 1365

    NASA Technical Reports Server (NTRS)

    Risaliti, G.; Bianchi, S.; Matt, G.; Baldi, A.; Elvis, M.; Fabbiano, G.; Zezas, A.

    2006-01-01

    We present the discovery of four absorption lines in the X-ray spectrum of the Seyfert galaxy NGC 1365, at energies between 6.7 and 8.3 keV. The lines are detected with high statistical confidence (from >20 sigma for the strongest to -4 sigma for the weakest) in two XMM-Newton observations 60 ks long. We also detect the same lines, with a lower signal-to-noise ratio (but still >2 sigma for each line), in two previous shorter (-10 ks) XMM-Newton observations. The spectral analysis identifies these features as Fe XXV and Fe XXVI Kalpha and Kbeta lines, outflowing with velocities varying between -1000 and -5000 km/s among the observations. These are the highest quality detections of such lines so far. The high equivalent widths [EW (Kalpha) approximately 100 eV] and the Kalpha/Kbeta ratios imply that the lines are due to absorption of the AGN continuum by a highly ionized gas with column density NH-5?1023 cm(exp -2) at a distance of -(50-100)RS from the continuum source.

  20. Quantum dynamical effects in liquid water: A semiclassical study on the diffusion and the infrared absorption spectrum.

    PubMed

    Liu, Jian; Miller, William H; Paesani, Francesco; Zhang, Wei; Case, David A

    2009-10-28

    The important role of liquid water in many areas of science from chemistry, physics, biology, geology to climate research, etc., has motivated numerous theoretical studies of its structure and dynamics. The significance of quantum effects on the properties of water, however, has not yet been fully resolved. In this paper we focus on quantum dynamical effects in liquid water based on the linearized semiclassical initial value representation (LSC-IVR) with a quantum version of the simple point charge/flexible (q-SPC/fw) model [Paesani et al., J. Chem. Phys. 125, 184507 (2006)] for the potential energy function. The infrared (IR) absorption spectrum and the translational diffusion constants have been obtained from the corresponding thermal correlation functions, and the effects of intermolecular and intramolecular correlations have been studied. The LSC-IVR simulation results are compared with those predicted by the centroid molecular dynamics (CMD) approach. Although the LSC-IVR and CMD results agree well for the broadband for hindered motions in liquid water, the intramolecular bending and O-H stretching peaks predicted by the LSC-IVR are blueshifted from those given by CMD; reasons for this are discussed. We also suggest that the broadband in the IR spectrum corresponding to restricted translation and libration gives more information than the diffusion constant on the nature of quantum effects on translational and rotational motions and should thus receive more attention in this regard.

  1. Connectivity-based parcellation reveals distinct cortico-striatal connectivity fingerprints in Autism Spectrum Disorder.

    PubMed

    Balsters, Joshua H; Mantini, Dante; Wenderoth, Nicole

    2017-02-08

    Autism Spectrum Disorder (ASD) has been associated with abnormal synaptic development causing a breakdown in functional connectivity. However, when measured at the macro scale using resting state fMRI, these alterations are subtle and often difficult to detect due to the large heterogeneity of the pathology. Recently, we outlined a novel approach for generating robust biomarkers of resting state functional magnetic resonance imaging (RS-fMRI) using connectivity based parcellation of gross morphological structures to improve single-subject reproducibility and generate more robust connectivity fingerprints. Here we apply this novel approach to investigating the organization and connectivity strength of the cortico-striatal system in a large sample of ASD individuals and typically developed (TD) controls (N=130 per group). Our results showed differences in the parcellation of the striatum in ASD. Specifically, the putamen was found to be one single structure in ASD, whereas this was split into anterior and posterior segments in an age, IQ, and head movement matched TD group. An analysis of the connectivity fingerprints revealed that the group differences in clustering were driven by differential connectivity between striatum and the supplementary motor area, posterior cingulate cortex, and posterior insula. Our approach for analysing RS-fMRI in clinical populations has provided clear evidence that cortico-striatal circuits are organized differently in ASD. Based on previous task-based segmentations of the striatum, we believe that the anterior putamen cluster present in TD, but not in ASD, likely contributes to social and language processes.

  2. A method to obtain the absorption coefficient spectrum of single grain coal in the aliphatic C-H stretching region using infrared transflection microspectroscopy.

    PubMed

    Tonoue, Ryota; Katsura, Makoto; Hamamoto, Mai; Bessho, Hiroki; Nakashima, Satoru

    2014-01-01

    A method was developed to obtain the absorption coefficient spectrum of a grain of coal (as small as 10(-7)) in the region of aliphatic and aromatic C-H stretching bands (2700-3200 cm(-1)) using infrared transflection microspectroscopy. In this method, the complex refractive index n - ik was determined using an optimization algorithm with the Kramers-Kronig transform so that the calculated transflection spectrum from the Fresnel equation corresponded to the measured one. The obtained absorption coefficients were compared with the bulk values determined from the potassium bromide (KBr) pellet measurement method.

  3. Total Absorption Spectroscopy Study of ⁹²Rb Decay: A Major Contributor to Reactor Antineutrino Spectrum Shape

    DOE PAGES

    Sonzogni, A.; Zakari-Issoufou, A. -A.; Fallot, M.; ...

    2015-03-09

    The accurate determination of the emitted reactor antineutrino flux is still a major challenge for actual and future neutrino experiments at reactors, especially after the evidence of a disagreement between the measured antineutrino energy spectrum by Double Chooz, Daya Bay, and Reno and calculated antineutrino spectra obtained from the conversion of the unique integral beta spectra measured at the ILL reactor. Using nuclear data to compute reactor antineutrino spectra may help understanding this bias, with the study of the underlying nuclear physics. Summation calculations allow identifying a list of nuclei that contribute importantly to the antineutrino energy spectra emitted aftermore » the fission of ²³⁹,²⁴¹Pu and ²³⁵,²³⁸U, and whose beta decay properties might deserve new measurements. Among these nuclei, ⁹²Rb exhausts by itself about 16% of of the antineutrino energy spectrum emitted by Pressurized Water Reactors in the 5 to 8 MeV range. In this Letter, we report new Total Absorption Spectroscopy (TAS) results for this important contributor. The obtained beta feeding from ⁹²Rb shows beta intensity unobserved before in the 4.5 to 5.5 MeV energy region and gives a ground state to ground state branch of 87.5 % ± 3%. These new data induce a dramatic change in recent summation calculations where a 51% GS to GS branch was considered for ⁹²Rb, increasing the summation antineutrino spectrum in the region nearby the observed bias.The new data still have an important impact on other summation calculations in which more recent data were considered« less

  4. Total Absorption Spectroscopy Study of ⁹²Rb Decay: A Major Contributor to Reactor Antineutrino Spectrum Shape

    SciTech Connect

    Sonzogni, A.; Zakari-Issoufou, A. -A.; Fallot, M.; Porta, A.; Algora, A.; Tain, J. L.; Valencia, E.; Rice, S.; Bui, V. M.; Cormon, S.; Estienne, M.; Agramunt, J.; Aysto, J.; Bowry, M.; Briz Monago, J. A.; Caballero-Folch, R.; Cano-Ott, D.; Cucoanes, A.; Eloma, V.; Estvez, E.; Farrelly, G. F.; Garcia, A.; Gelletly, W.; Gomez-Hornillos, M. B.; Gorlychev, V.; Hakala, J.; Jokinen, A.; Jordan, M. D.; Kankainen, A.; Kondev, F. G.; Martinez, T.; Mendoza, E.; Molina, F.; Moore, I.; Perez, A.; Podolyak, Zs.; Penttil, H.; Regan, P. H.; Shiba, T.; Rissanen, J.; Rubio, B.; Weber, C.

    2015-03-09

    The accurate determination of the emitted reactor antineutrino flux is still a major challenge for actual and future neutrino experiments at reactors, especially after the evidence of a disagreement between the measured antineutrino energy spectrum by Double Chooz, Daya Bay, and Reno and calculated antineutrino spectra obtained from the conversion of the unique integral beta spectra measured at the ILL reactor. Using nuclear data to compute reactor antineutrino spectra may help understanding this bias, with the study of the underlying nuclear physics. Summation calculations allow identifying a list of nuclei that contribute importantly to the antineutrino energy spectra emitted after the fission of ²³⁹,²⁴¹Pu and ²³⁵,²³⁸U, and whose beta decay properties might deserve new measurements. Among these nuclei, ⁹²Rb exhausts by itself about 16% of of the antineutrino energy spectrum emitted by Pressurized Water Reactors in the 5 to 8 MeV range. In this Letter, we report new Total Absorption Spectroscopy (TAS) results for this important contributor. The obtained beta feeding from ⁹²Rb shows beta intensity unobserved before in the 4.5 to 5.5 MeV energy region and gives a ground state to ground state branch of 87.5 % ± 3%. These new data induce a dramatic change in recent summation calculations where a 51% GS to GS branch was considered for ⁹²Rb, increasing the summation antineutrino spectrum in the region nearby the observed bias.The new data still have an important impact on other summation calculations in which more recent data were considered

  5. Optoelectronic set for measuring the absorption spectrum of the thin biological media

    NASA Astrophysics Data System (ADS)

    Gryko, Lukasz; Zajac, Andrzej; Gilewski, Marian

    2013-10-01

    In the paper the authors present the developed optoelectronic system for controlled, repetitive exposure by electromagnetic radiation of biological structures in the Low Level Laser (LED) Therapy procedures. The set allows for objective selection and control of the irradiation parameters by light from spectral range of the tissues transmission window. Measurements of optical parameters of thin biological medium - spectral absorption coefficient and the amount of absorbed energy - can be implemented in the measuring chamber during irradiation treatment. The radiation source is the broadband illuminator consists of set of selected high power LEDs. The maximum optical power of single source is from 80 mW to 800 mW. Illuminator is controlled and powered by the multi-channel prototype control system, which allows independently control a current of each emitter. This control allows shaping spectral emission characteristic of broadband source in range 600-1000 nm. Illuminator allows providing in the working area of 700 cm2 a uniform distribution of optical power density, of 10 mW/cm2 for maximum. Set ensure uniform distribution of the spectral power density of up to 40 mW/nm.

  6. Infrared-absorption spectrum of the electron bubble in liquid helium

    NASA Astrophysics Data System (ADS)

    Grimes, C. C.; Adams, G.

    1992-02-01

    The energy of the electronic transition from the ground state to the first excited state in the electron bubble in liquid helium has been measured by direct infrared absorption at pressures from zero to the solidification pressure and at temperatures from 1.3 to 4.2 K. At 1.3 K the 1s-1p splitting varies from 0.102 eV at P=0 to 0.227 eV at P=25 atm. At intermediate pressures a simple spherical-square-well model calculation fits the measured splittings within a few percent if the surface tension is taken to be independent of pressure. This model, when extended to allow for dilation and elongation of bubbles trapped on vorticity and dilation of rapidly drifting bubbles, agrees well with the observed transition energies at all pressures. The measured linewidths are larger by at least a factor of 2 than those calculated, which may indicate heating of rapidly drifting bubbles.

  7. [Measurements of IR absorption across section and spectrum simulation of lewisite].

    PubMed

    Zhang, Yuan-peng; Wang, Hai-tao; Zhang, Lin; Yang, Liu; Guo, Xiao-di; Bai, Yun; Sun, Hao

    2015-02-01

    The vapor infrared transmission spectra of varied concentration of lewisite-1 were measured by a long-path FT-IR spectrometer, and its characteristic frequencies are 814, 930, 1563 cm(-1); their infrared absorption cross section (a) were determined using Beer-Lambert law. The corresponding sigma values are 3.89 +/- 0.01, 1.43 +/- 0.06, 4.47 +/- 0.05 ( X 10(-20) cm2 x molecule(-1)). Two little teeny peaks, 1158, 1288 cm(-1) were found in the measured spectra. Density Functional Theory (DFT) was applied to calculated the infrared spectra of lewisite-1, -2, -3 on a b3lyp/6-311+g(d, p) level by Gauss09 package. The vibration modes were assigned by Gaussview5. 08. The calculated spectra and experimental spectra are in good agreement with each other in 600-1600 cm(-1) range, for the Person's r is 0.9991. The calculated spectra also showed three characteristic frequencies (293, 360, 374 cm(-1)) related to As atom. 0.977 was a scaling factor we determined for lewisite-1 through least-square error and its performance to scale lewisite-1, -2, -3 was acceptable. The results of this work are useful for monitoring environmental atmospheric concentrations of lewisite.

  8. Nonadiabatic photodynamics and UV absorption spectrum of all-trans-octatetraene.

    PubMed

    Lyskov, Igor; Köppel, Horst; Marian, Christel M

    2017-02-01

    The short-time molecular quantum dynamics of all-trans-octatetraene after electronic excitation to the first bright valence state is theoretically investigated. A semiempirical approach of a multireference configuration interaction based on density functional theory, the so called hybrid DFT/MRCI, in both its original and redesigned formulations, is used for treating the electronic part of the problem. The nuclear kinetic part is defined with the help of symmetry-adapted internal coordinates also suitable for a large amplitude displacement. By incorporating ten in-plane and two out-of-plane nuclear degrees of freedom in the underlying Hamiltonian, the results of the time evolution of the excited wave packet are discussed. We show that the population transfer between the two coupled low-lying states in all-trans-octatetraene occurs in a 100-200 fs time regime. The calculated UV absorption spectra describe the main vibronic features correctly except for the band associated with the single-bond stretching motion which lacks intensity. The possible products of the photoisomerization in terms of symmetry-adapted coordinates are also discussed.

  9. Study of C2H2 optic-fiber monitoring system on spectrum absorption

    NASA Astrophysics Data System (ADS)

    Wang, Yutian; Li, Xiao-Xin; Wang, Zhong-Dong

    2005-02-01

    We report our research on the development of optical fiber trace gas sensors for environmental applications. A novel optical fiber sensor for monitoring acetylene (C2H2) gases is described. Through studying the measure theory, we use the Beer-Lambert law to monitor the gas. And after analyzing the C2H2 spectrum, we select Distributed Feedback Laser Diode (DFB LD) as light source. Comparing many kinds" sensor detection head, the gas absorbing cell with tail fiber can have good coupling with optical fiber and improve the coupling stability. In the data processing system, signals are distilled by lock-in amplifiers and then harmonic measure technology processes that distilled faint signals. After the all, the electronic signals are transmitted into computer to process, alarm and display. We design the instrument who can remote and on-line measuring acetylene. Through theory analysis and system experiment, the design of the system is practicable, and has a better precision and some apply foreground.

  10. Revealing the underlying absorption and emission mechanism of nitrogen doped graphene quantum dots.

    PubMed

    Niu, Xianghong; Li, Yunhai; Shu, Huabing; Wang, Jinlan

    2016-11-24

    Nitrogen-doped graphene quantum dots (N-GQDs) hold promising application in electronics and optoelectronics because of their excellent photo-stability, tunable photoluminescence and high quantum yield. However, the absorption and emission mechanisms have been debated for years. Here, by employing time-dependent density functional theory, we demonstrate that the different N-doping types and positions give rise to different absorption and emission behaviors, which successfully addresses the inconsistency observed in different experiments. Specifically, center doping creates mid-states, rendering non-fluorescence, while edge N-doping modulates the energy levels of excited states and increases the radiation transition probability, thus enhancing fluorescence strength. More importantly, the even hybridization of frontier orbitals between edge N atoms and GQDs leads to a blue-shift of both absorption and emission spectra, while the uneven hybridization of frontier orbitals induces a red-shift. Solvent effects on N-GQDs are further explored by the conductor-like screening model and it is found that strong polarity of the solvent can cause a red-shift and enhance the intensity of both absorption and emission spectra.

  11. Comorbid Analysis of Genes Associated with Autism Spectrum Disorders Reveals Differential Evolutionary Constraints

    PubMed Central

    David, Maude M.; Enard, David; Ozturk, Alp; Daniels, Jena; Jung, Jae-Yoon; Diaz-Beltran, Leticia; Wall, Dennis. P.

    2016-01-01

    The burden of comorbidity in Autism Spectrum Disorder (ASD) is substantial. The symptoms of autism overlap with many other human conditions, reflecting common molecular pathologies suggesting that cross-disorder analysis will help prioritize autism gene candidates. Genes in the intersection between autism and related conditions may represent nonspecific indicators of dysregulation while genes unique to autism may play a more causal role. Thorough literature review allowed us to extract 125 ICD-9 codes comorbid to ASD that we mapped to 30 specific human disorders. In the present work, we performed an automated extraction of genes associated with ASD and its comorbid disorders, and found 1031 genes involved in ASD, among which 262 are involved in ASD only, with the remaining 779 involved in ASD and at least one comorbid disorder. A pathway analysis revealed 13 pathways not involved in any other comorbid disorders and therefore unique to ASD, all associated with basal cellular functions. These pathways differ from the pathways associated with both ASD and its comorbid conditions, with the latter being more specific to neural function. To determine whether the sequence of these genes have been subjected to differential evolutionary constraints, we studied long term constraints by looking into Genomic Evolutionary Rate Profiling, and showed that genes involved in several comorbid disorders seem to have undergone more purifying selection than the genes involved in ASD only. This result was corroborated by a higher dN/dS ratio for genes unique to ASD as compare to those that are shared between ASD and its comorbid disorders. Short-term evolutionary constraints showed the same trend as the pN/pS ratio indicates that genes unique to ASD were under significantly less evolutionary constraint than the genes associated with all other disorders. PMID:27414027

  12. Evaluation of copy number variations reveals novel candidate genes in autism spectrum disorder-associated pathways

    PubMed Central

    Griswold, Anthony J.; Ma, Deqiong; Cukier, Holly N.; Nations, Laura D.; Schmidt, Mike A.; Chung, Ren-Hua; Jaworski, James M.; Salyakina, Daria; Konidari, Ioanna; Whitehead, Patrice L.; Wright, Harry H.; Abramson, Ruth K.; Williams, Scott M.; Menon, Ramkumar; Martin, Eden R.; Haines, Jonathan L.; Gilbert, John R.; Cuccaro, Michael L.; Pericak-Vance, Margaret A.

    2012-01-01

    Autism spectrum disorders (ASDs) are highly heritable, yet relatively few associated genetic loci have been replicated. Copy number variations (CNVs) have been implicated in autism; however, the majority of loci contribute to <1% of the disease population. Therefore, independent studies are important to refine associated CNV regions and discover novel susceptibility genes. In this study, a genome-wide SNP array was utilized for CNV detection by two distinct algorithms in a European ancestry case–control data set. We identify a significantly higher burden in the number and size of deletions, and disrupting more genes in ASD cases. Moreover, 18 deletions larger than 1 Mb were detected exclusively in cases, implicating novel regions at 2q22.1, 3p26.3, 4q12 and 14q23. Case-specific CNVs provided further evidence for pathways previously implicated in ASDs, revealing new candidate genes within the GABAergic signaling and neural development pathways. These include DBI, an allosteric binder of GABA receptors, GABARAPL1, the GABA receptor-associated protein, and SLC6A11, a postsynaptic GABA transporter. We also identified CNVs in COBL, deletions of which cause defects in neuronal cytoskeleton morphogenesis in model vertebrates, and DNER, a neuron-specific Notch ligand required for cerebellar development. Moreover, we found evidence of genetic overlap between ASDs and other neurodevelopmental and neuropsychiatric diseases. These genes include glutamate receptors (GRID1, GRIK2 and GRIK4), synaptic regulators (NRXN3, SLC6A8 and SYN3), transcription factor (ZNF804A) and RNA-binding protein FMR1. Taken together, these CNVs may be a few of the missing pieces of ASD heritability and lead to discovering novel etiological mechanisms. PMID:22543975

  13. Using Multimedia to Reveal the Hidden Code of Everyday Behaviour to Children with Autistic Spectrum Disorders (ASDs)

    ERIC Educational Resources Information Center

    Doyle, Theresa; Arnedillo-Sanchez, Inmaculada

    2011-01-01

    This paper describes a framework which was developed for carers (teachers and parents) to help them create personalised social stories for children with autistic spectrum disorders (ASDs). It explores the social challenges experienced by individuals with ASDs and outlines an intervention aimed at revealing the hidden code that underpins social…

  14. The absorption spectrum of monodeuterated methane /CH3D/ in the 6000-12000 A spectral region. [in atmospheres of outer planets

    NASA Technical Reports Server (NTRS)

    Danehy, R. G.; Lutz, B. L.; Owen, T.; Scattergood, T. W.; Goetz, W.

    1977-01-01

    Preliminary results of a laboratory study of the absorption spectrum of CH3D are presented. Three new parallel-type bands are reported at 8379 A, 9613 A, and 1.065 microns. The application of this work to the search for CH3D in the atmospheres of the outer planets is discussed.

  15. Spectrum of excess partial molar absorptivity. Part II: a near infrared spectroscopic study of aqueous Na-halides.

    PubMed

    Sebe, Fumie; Nishikawa, Keiko; Koga, Yoshikata

    2012-04-07

    Our earlier thermodynamic studies suggested that F(-) and Cl(-) form hydration shells with the hydration number 14 ± 2 and 2.3 ± 0.6, respectively, and leave the bulk H(2)O away from hydration shells unperturbed. Br(-) and I(-), on the other hand, form hydrogen bonds directly with the momentarily existing hydrogen bond network of H(2)O, and retard the degree of entropy-volume cross fluctuation inherent in liquid H(2)O. The effect of the latter is stronger for I(-) than Br(-). Here we seek additional information about this qualitative difference between Cl(-) and (Br(-) and I(-)) pair by near infrared (NIR) spectroscopy. We analyze the ν(2) + ν(3) band of H(2)O in the range 4600-5500 cm(-1) of aqueous solutions of NaCl, NaBr and NaI, by a new approach. From observed absorbance, we calculate excess molar absorptivity, ε(E), excess over the additive contributions of solute and solvent. ε(E) thus contains information about the effect of inter-molecular interactions in the ν(2) + ν(3) spectrum. The spectrum of ε(E) shows three bands; two negative ones at 5263 and 4873 cm(-1), and the positive band at 5123 cm(-1). We then define and calculate the excess partial molar absorptivity of each salt, ε(E)(salt). From the behaviour of ε(E)(salt) we suggest that the negative band at 5263 cm(-1) represents free H(2)O without much hydrogen bonding under the influence of local electric field of ions. Furthermore, from a sudden change in the x(salt) (mole fraction of salt) dependence of ε(E)(salt), we suggest that there is an ion-pairing in x(salt) > 0.032, 0.036, and 0.04 for NaCl, NaBr and NaI respectively. The positive band of ε(E) at 5123 cm(-1) is attributed to a modestly organized hydrogen bond network of H(2)O (or liquid-likeness), and the x(salt) dependence of ε indicated a qualitative difference in the effect of Cl(-) from those of Br(-) and I(-). Namely, the values of ε(E)(salt) stay constant for Cl(-) but those for Br(-) and I(-) decrease smoothly on

  16. [Formation of maxima in the absorption spectrum of carotenoids in the region around 370 nm; consequences for the interpretation of certain action spectra].

    PubMed

    Hager, A

    1970-03-01

    1. Most carotenoids show a 3-peak-absorption curve in the visible spectral region in polar solutions. The addition of a definite quantity of H2O to such solutions (ethanol, methanol, aceton, isopropanol) changes the absorption curve of these pigments in a characteristic manner. A new peak appears in the uv region of the spectrum (e.g.in the case of lutein at 370 nm); simultaneously the 3-peak fine structure of the visible spectrum diminishes and completely disappears after further addition of H2O. Such changes are observed especially in the case of lutein and zeaxanthin, but also in the case of neoxanthin, violaxanthin and lycopene (of the carotenoids analyzed). During thermic excitation (45° C) the uv-peak in the carotenoid spectrum disappears and the normal 3-peak curve is restored; upon cooling the uv-peak appears again. The variation of the carotenoid spectrum and the formation of a maximum in the uv-region are possibly caused by an aggregation of the pigment molecules with participation of H2O molecules. This formation of polymers obviously leads to an alteration in the distribution of electrons in the chromophore system of the carotenoid molecule and thereby to a change of the light absorption. 2. Water-soluble carotenoid complexes isolated from spinach chloroplasts show a strong light absorption in the uv-region and a one-peak absorption curve in the visible blue. After transfer of the complex to polar solutions a characteristic 3-peak carotenoid curve appears in the blue region of the spectrum; concomitantly the maximum in the uv disappears. That means that carotenoids which are bound to membranes or particles in the intact cell may have a 4-peak absorption curve similar to that of pigments which are dissolved in the water-containing alcohols mentioned above. It is conceivable that those carotenoids which do not form uv peaks in the dissolved state are able to do so under conditions under which carotenoids are bound to membranes or particles. 3. The

  17. Atmospheric chemistry of hydrazoic acid (HN3): UV absorption spectrum, HO reaction rate, and reactions of the N3 radical.

    PubMed

    Orlando, John J; Tyndall, Geoffrey S; Betterton, Eric A; Lowry, Joe; Stegall, Steve T

    2005-03-15

    Processes related to the tropospheric lifetime and fate of hydrazoic acid, HN3, have been studied. The ultraviolet absorption spectrum of HN3 is shown to possess a maximum near 262 nm with a tail extending to at least 360 nm. The photolysis quantum yield for HN3 is shown to be approximately 1 at 351 nm. Using the measured spectrum and assuming unity quantum yield throughout the actinic region, a diurnally averaged photolysis lifetime near the earth's surface of 2-3 days is estimated. Using a relative rate method, the rate coefficient for reaction of HO with HN3 was found to be (3.9 +/-0.8) x 10(-12) cm3 molecule(-1) s(-1), substantially larger than the only previous measurement. The atmospheric HN3 lifetime with respect to HO oxidation is thus about 2-3 days, assuming a diurnally averaged [HO] of 10(6) molecule cm(-3). Reactions of N3, the product of the reaction of HO with HN3, were studied in an environmental chamber using an FTIR spectrometer for end-product analysis. The N3 radical reacts efficiently with NO, producing N2O with 100% yield. Reaction of N3 with NO2 appears to generate both NO and N2O, although the rate coefficient for this reaction is slower than that for reaction with NO. No evidence for reaction of N3 with CO was observed, in contrast to previous literature data. Reaction of N3 with O2 was found to be extremely slow, k < 6 x 10(-20) cm3 molecule(-1) s(-1), although this upper limit does not necessarily rule out its occurrence in the atmosphere. Finally, the rate coefficient for reaction of Cl with HN3 was measured using a relative rate method, k = (1.0+/-0.2) x 10(-12) cm3 molecule(-1) s(-1).

  18. Resonance Rayleigh scattering, frequency doubling scattering and absorption spectrum of the interaction for mebendazole with 12-tungstophosphoric acid and its analytical applications.

    PubMed

    Tian, Fengling; Yang, Jidong; Huang, Wei; Zhou, Shang; Yao, Gengyang

    2013-12-01

    The interaction of mebendazole (MBZ) with 12-tungstophosphoric acid (TP) has been investigated by using resonance Rayleigh scattering (RRS) and frequency doubling scattering (FDS) combining with absorption spectrum. In pH 1.0 HCl medium, MBZ reacted with TP to form 3:1 ion-association complex. As a result, not only the spectrum of absorption was changed, but also the intensities of RRS and FDS were enhanced greatly. The maximum RRS, FDS and absorption wavelengths are located at 372, 392 and 260 nm, respectively. The increments of scattering intensity (ΔI) and absorption (ΔA) are directly proportional to the concentrations of MBZ in certain ranges. The detection limits (3σ) of RRS, FDS and absorption are 0.56, 0.86 and 130.16 ng/mL, respectively. The sensitivity of RRS method is higher than FDS and absorption methods. The optimum conditions of RRS method and the influence factors were discussed in the paper, in addition, the structure of ion-association complex and the reaction mechanism were investigated. Based on the ion-association reaction and its spectral response, the rapid, simple and sensitive RRS method for the determination of MBZ has been developed.

  19. Upper limits on the 21 cm power spectrum at z = 5.9 from quasar absorption line spectroscopy

    NASA Astrophysics Data System (ADS)

    Pober, Jonathan C.; Greig, Bradley; Mesinger, Andrei

    2016-11-01

    We present upper limits on the 21 cm power spectrum at z = 5.9 calculated from the model-independent limit on the neutral fraction of the intergalactic medium of x_{H I} < 0.06 + 0.05 (1σ ) derived from dark pixel statistics of quasar absorption spectra. Using 21CMMC, a Markov chain Monte Carlo Epoch of Reionization analysis code, we explore the probability distribution of 21 cm power spectra consistent with this constraint on the neutral fraction. We present 99 per cent confidence upper limits of Δ2(k) < 10-20 mK2 over a range of k from 0.5 to 2.0 h Mpc-1, with the exact limit dependent on the sampled k mode. This limit can be used as a null test for 21 cm experiments: a detection of power at z = 5.9 in excess of this value is highly suggestive of residual foreground contamination or other systematic errors affecting the analysis.

  20. Infrared Attenuation Spectrum of Bulk High-Resistivity CdZnTe Single Crystal in Transparent Wavelength Region Between Electronic and Lattice Absorptions

    NASA Astrophysics Data System (ADS)

    Sarugaku, Yuki; Kaji, Sayumi; Ikeda, Yuji; Kobayashi, Naoto; Sukegawa, Takashi; Nakagawa, Takao; Kataza, Hirokazu; Kondo, Sohei; Yasui, Chikako; Nakanishi, Kenshi; Kawakita, Hideyo

    2017-01-01

    We report measurement of the internal attenuation coefficient, α _{att}, of a bulk high-resistivity cadmium zinc telluride (CdZnTe) single crystal at wavelength, λ = 0.84-26 μm, to the unprecedentedly low level of α _{att} ˜ 0.001 cm^{-1}. This measurement reveals the spectral behavior for small attenuation in the infrared transparent region between the electronic and lattice absorptions. This result is essential for application of CdZnTe as an infrared transmitting material. Comparing the attenuation spectrum with model spectra obtained on the basis of Mie theory, we find that sub-micrometer-sized Te particles (inclusions) with a number density of approximately 10^{7.5-9} cm^{-3} are the principal source of the small attenuation observed at λ = 0.9-13 μm. In addition, we determine α _{att} = (7.7 ± 1.9) × 10^{-4} cm^{-1} at λ = 10.6 μm, which is valuable for CO_2 laser applications. Higher transparency can be achieved by reducing the number of inclusions rather than the number of precipitates. This study also demonstrates that high-accuracy measurement of CdZnTe infrared transmittance is a useful approach to investigating the number density of sub-micrometer-sized Te particles that cannot be identified via infrared microscopy.

  1. A Giant Metrewave Radio Telescope search for associated H I 21 cm absorption in high-redshift flat-spectrum sources

    NASA Astrophysics Data System (ADS)

    Aditya, J. N. H. S.; Kanekar, Nissim; Kurapati, Sushma

    2016-02-01

    We report results from a Giant Metrewave Radio Telescope search for `associated' redshifted H I 21 cm absorption from 24 active galactic nuclei (AGNs), at 1.1 < z < 3.6, selected from the Caltech-Jodrell Bank Flat-spectrum (CJF) sample. 22 out of 23 sources with usable data showed no evidence of absorption, with typical 3σ optical depth detection limits of ≈0.01 at a velocity resolution of ≈30 km s-1. A single tentative absorption detection was obtained at z ≈ 3.530 towards TXS 0604+728. If confirmed, this would be the highest redshift at which H I 21 cm absorption has ever been detected. Including 29 CJF sources with searches for redshifted H I 21 cm absorption in the literature, mostly at z < 1, we construct a sample of 52 uniformly selected flat-spectrum sources. A Peto-Prentice two-sample test for censored data finds (at ≈3σ significance) that the strength of H I 21 cm absorption is weaker in the high-z sample than in the low-z sample; this is the first statistically significant evidence for redshift evolution in the strength of H I 21 cm absorption in a uniformly selected AGN sample. However, the two-sample test also finds that the H I 21 cm absorption strength is higher in AGNs with low ultraviolet or radio luminosities, at ≈3.4σ significance. The fact that the higher luminosity AGNs of the sample typically lie at high redshifts implies that it is currently not possible to break the degeneracy between AGN luminosity and redshift evolution as the primary cause of the low H I 21 cm opacities in high-redshift, high-luminosity AGNs.

  2. The Rubber Hand Illusion Reveals Proprioceptive and Sensorimotor Differences in Autism Spectrum Disorders

    ERIC Educational Resources Information Center

    Paton, Bryan; Hohwy, Jakob; Enticott, Peter G.

    2012-01-01

    Autism spectrum disorder (ASD) is characterised by differences in unimodal and multimodal sensory and proprioceptive processing, with complex biases towards local over global processing. Many of these elements are implicated in versions of the rubber hand illusion (RHI), which were therefore studied in high-functioning individuals with ASD and a…

  3. Anomalous evolution of broadband optical absorption reveals dynamic solid state reorganization during eumelanin build-up in thin films.

    PubMed

    Bonavolontà, Carmela; Lisio, Corrado de; d'Ischia, Marco; Maddalena, Pasqualino; Manini, Paola; Pezzella, Alessandro; Valentino, Massimo

    2017-03-31

    The origin of eumelanin optical properties remains a formidable conundrum preventing a detailed understanding of the complex photo-protective role of these widespread natural pigments and the rational design of innovative bioinspired materials for optoelectronic applications. Here we report the unusual kinetic and thickness-dependent evolution of the optical properties of black eumelanin polymers generated by spontaneous aerial polymerization of 5,6-dihydroxyindole (DHI) thin films (0.1-1 μm), consistent with peculiar solid state reorganization mechanisms governing broadband absorption. The complete reversal of eumelanin UV-visible transmittance spectrum curvature on passing from 0.2 to 0.5 μm thick films, the marked increase in visible extinction coefficients with increasing film thickness and the higher UV extinction coefficients in slowly vs. rapidly generated polymers concur to support distinct dynamic regimes of solid-state molecular reorganization at the nanoscale level and to do affect the development of broadband visible absorption. Solid state control of molecular reorganization disclosed herein may delineate new rational strategies for tuning optical properties in eumelanin thin films for optoelectronic applications.

  4. JUPITER AS AN EXOPLANET: UV TO NIR TRANSMISSION SPECTRUM REVEALS HAZES, A Na LAYER, AND POSSIBLY STRATOSPHERIC H{sub 2}O-ICE CLOUDS

    SciTech Connect

    Montañés-Rodríguez, Pilar; González-Merino, B.; Pallé, E.

    2015-03-01

    Currently, the analysis of transmission spectra is the most successful technique to probe the chemical composition of exoplanet atmospheres. However, the accuracy of these measurements is constrained by observational limitations and the diversity of possible atmospheric compositions. Here, we show the UV–VIS–IR transmission spectrum of Jupiter as if it were a transiting exoplanet, obtained by observing one of its satellites, Ganymede, while passing through Jupiter’s shadow, i.e., during a solar eclipse from Ganymede. The spectrum shows strong extinction due to the presence of clouds (aerosols) and haze in the atmosphere and strong absorption features from CH{sub 4}. More interestingly, the comparison with radiative transfer models reveals a spectral signature, which we attribute here to a Jupiter stratospheric layer of crystalline H{sub 2}O ice. The atomic transitions of Na are also present. These results are relevant for the modeling and interpretation of giant transiting exoplanets. They also open a new technique to explore the atmospheric composition of the upper layers of Jupiter’s atmosphere.

  5. Auto-oligomerization and hydration of pyrrole revealed by x-ray absorption spectroscopy

    SciTech Connect

    Advanced Light Source; Schwartz, Craig P.; Uejio, Janel S.; Duffin, Andrew M.; England, Alice H.; Prendergast, David; Saykally, Richard J

    2009-05-29

    Near edge x-ray absorption fine structure (NEXAFS) spectra have been measured at the carbon and nitrogen K-edges of the prototypical aromatic molecule, pyrrole, both in the gas phase and when solvated in water, and compared with spectra simulated using a combination of classical molecular dynamics and first principles density functional theory in the excited state core hole approximation. The excellent agreement enabled detailed assignments. Pyrrole is highly reactive, particularly in water, and reaction products formed by the auto-oligomerization of pyrrole are identified. The solvated spectra have been measured at two different temperatures, indicating that the final states remain largely unaffected by both hydration and temperature. This is somewhat unexpected, since the nitrogen in pyrrole can donate a hydrogen bond to water.

  6. Galactic Soft X-ray Emission Revealed with Spectroscopic Study of Absorption and Emission Spectra

    NASA Astrophysics Data System (ADS)

    Yamasaki, Noriko Y.; Mitsuda, K.; Takei, Y.; Hagihara, T.; Yoshino, T.; Wang, Q. D.; Yao, Y.; McCammon, D.

    2010-03-01

    Spectroscopic study of Oxygen emission/absorption lines is a new tool to investigate the nature of the soft X-ray background. We investigated the emission spectra of 14 fields obtained by Suzaku, and detected OVII and OVIII lines separately. There is an almost isotropic OVII line emission with 2 LU intensity. As the attenuation length in the Galactic plane for that energy is short, that OVII emission should arise within 300 pc of our neighborhood. In comparison with the estimated emission measure for the local bubble, the most plausible origin of this component is the solar wind charge exchange with local interstellar materials. Another component presented from the correlation between the OVII and OVIII line intensity is a thermal emission with an apparent temperature of 0.2 keV with a field-to-field fluctuation of 10% in temperature, while the intensity varies about a factor of 4. By the combination analysis of the emission and the absorption spectra, we can investigate the density and the scale length of intervening plasma separately. We analyzed the Chanrdra grating spectra of LMC X-3 and PKS 2155-304, and emission spectra toward the line of sight by Suzaku. In both cases, the combined analysis showed that the hot plasma is not iso-thermal nor uniform. Assuming an exponential disk distribution, the thickness of the disk is as large as a few kpc. It suggests that there is a thick hot disk or hot halo surrounding our Galaxy, which is similar to X-ray hot haloes around several spiral galaxies.

  7. Origin of absorption peaks in reflection loss spectrum in Ku- frequency band of Co-Zr substituted strontium hexaferrites prepared using sucrose precursor

    NASA Astrophysics Data System (ADS)

    Narang, Sukhleen Bindra; Pubby, Kunal; Chawla, S. K.; Kaur, Prabhjyot

    2017-03-01

    This study presents the detailed explanation of the factors, contributing towards the absorption peaks in reflection loss spectrum of hexaferrites. Cobalt-Zirconium substituted strontium hexaferrites, synthesized using sucrose precursor sol-gel technique, were analyzed in 12.4-18 GHz frequency range. The concepts of impedance matching through quarter wavelength condition, complex thickness, dielectric phase angle and attenuation constant have been used to determine the location as well as intensity of absorption peaks. This study also demonstrates the potential application of three compositions of this series with doping content (x)==0.0, 0.6 and 0.8 as an effective microwave absorbers in Ku-frequency band.

  8. Cavity Ringdown Absorption Spectrum of the T_1 (n,π^{*}) ← S_0 Transition of 2-CYCLOHEXEN-1-ONE

    NASA Astrophysics Data System (ADS)

    Zabronsky, Katherine L.; McAnally, Michael O.; Stupca, Daniel J.; Pillsbury, Nathan R.; Drucker, Stephen

    2013-06-01

    The cavity ringdown (CRD) absorption spectrum of 2-cyclohexen-1-one (CHO) was recorded over the range 401.5-410.5 nm in a room-temperature gas cell. The very weak band system (ɛ ≤ 0.02 dm^3 mol^{-1} {cm}^{-1}) in this region is due to the T_1(n, π*) ← S_0 electronic transition. The 0^0_0 origin band was assigned to the feature observed at {24,558.6 ± 0.3 {cm}^{-1}}. We have assigned about 25 vibronic transitions in a region extending from {-200 to +350 cm^{-1}} relative to the origin band. From these assignments we determined fundamental frequencies for several vibrational modes in the T_1 excited state. The table below compares their frequencies to corresponding values measured for CHO vapor in the S_0 electronic ground state (via far-IR spectroscopy) and the S_1(n, π*) excited state (via near-UV CRD spectroscopy). Low-frequency fundamentals (cm^{-1}) of CHO vapor Mode Description S_0 S_1(n,π^*) T_1(n,π^*) 39 ring twist 99.2 122.1 99.5 38 bend (inversion of C-5) 247 251.9 253.2 37 C=C twist 304.1 303.3 247.8 36 C=O wag 485 343.9 345.5 For ν_{39} and ν_{37}, the differences between S_1 and T_1 frequencies are noteworthy. These differences suggest that the electron delocalization associated with the π^* ← n chromophore in CHO is substantially different for singlet vs. triplet excitation. T. L. Smithson and H. Wieser, J. Chem. Phys. {73}, 2518 (1980) M. Z. M. Rishard and J. Laane, J. Molec. Struct. {976}, 56 (2010). M. Z. M. Rishard, E. A. Brown, L. K. Ausman, S. Drucker and J. Laane, J. Phys. Chem. A {112}, 38 (2008).

  9. Whole Genome Sequencing Reveals a De Novo SHANK3 Mutation in Familial Autism Spectrum Disorder

    PubMed Central

    Nemirovsky, Sergio I.; Córdoba, Marta; Zaiat, Jonathan J.; Completa, Sabrina P.; Vega, Patricia A.; González-Morón, Dolores; Medina, Nancy M.; Fabbro, Mónica; Romero, Soledad; Brun, Bianca; Revale, Santiago; Ogara, María Florencia; Pecci, Adali; Marti, Marcelo; Vazquez, Martin; Turjanski, Adrián; Kauffman, Marcelo A.

    2015-01-01

    Introduction Clinical genomics promise to be especially suitable for the study of etiologically heterogeneous conditions such as Autism Spectrum Disorder (ASD). Here we present three siblings with ASD where we evaluated the usefulness of Whole Genome Sequencing (WGS) for the diagnostic approach to ASD. Methods We identified a family segregating ASD in three siblings with an unidentified cause. We performed WGS in the three probands and used a state-of-the-art comprehensive bioinformatic analysis pipeline and prioritized the identified variants located in genes likely to be related to ASD. We validated the finding by Sanger sequencing in the probands and their parents. Results Three male siblings presented a syndrome characterized by severe intellectual disability, absence of language, autism spectrum symptoms and epilepsy with negative family history for mental retardation, language disorders, ASD or other psychiatric disorders. We found germline mosaicism for a heterozygous deletion of a cytosine in the exon 21 of the SHANK3 gene, resulting in a missense sequence of 5 codons followed by a premature stop codon (NM_033517:c.3259_3259delC, p.Ser1088Profs*6). Conclusions We reported an infrequent form of familial ASD where WGS proved useful in the clinic. We identified a mutation in SHANK3 that underscores its relevance in Autism Spectrum Disorder. PMID:25646853

  10. The Nature of the Vela Supernova Remnant as Revealed by O VI and C IV Absorption

    NASA Technical Reports Server (NTRS)

    Lines, Nichols J.; Slavin, J.; Anderson, C.

    2001-01-01

    Highly ionized gas, in particular C IV and O VI, is produced in the interstellar medium in regions with hot (T approx. 10(exp 6) K) X-ray emitting gas and at the boundaries where hot gas and cooler (T approx. 10(exp 4) K) gas interact. Supernova remnant shocks produce most of the hot gas in the ISM and, if they are in the correct range of speeds, should produce observable quantities of C IV and O VI absorption. In turn, the column densities of these ions are potentially powerful diagnostics of the shock speed and interstellar environment in which the SNR is evolving. With the advent of FUSE, the power of this diagnostic technique is now available. We have FUSE data toward 8 stars behind the Vela SNR, and have developed a data reduction and analysis method that produces reasonably reliable O VI column densities, in spite of the complexities of the FUSE spectra in this region. In order to gain insight into the observational results, the Vela SNR evolution was modelled using Piecewise Parabolic Method numerical hydrodynamics code. The code is 1-D and incorporates non-equilibrium ionization, radiative cooling, thermal conduction and magnetic pressure.

  11. Absorption Reveals and Hydrogen Addition Explains New Interstellar Aldehydes: Propenal and Propanal

    NASA Technical Reports Server (NTRS)

    Hollis, J. M.; Jewell, P. R.; Lovas, F. J.; Remijan, A.; Mollendal, H.

    2004-01-01

    New interstellar molecules propenal (CH2CHCHO) and propanal (CH3CH2CHO) have been detected largely in absorption toward the star-forming region Sagittarius B2(N) by means of rotational transitions observed with the 100-m Green Bank Telescope (GBT) operating in the range of 18 GHz (lambda approximately 1.7 cm) to 26 GHz (lambda approximately 1.2 cm). The GBT was also used to observe the previously reported interstellar aldehyde propynal (HC2CHO) in Sagittarius B2(N) which is known for large molecules believed to form on interstellar grains. The presence of these three interstellar aldehydes toward Sagittarius B2(N) strongly suggests that simple hydrogen addition on interstellar grains accounts for successively larger molecular species: from propynal to propenal and from propenal to propanal. Energy sources within Sagittarius B2(N) likely permit the hydrogen addition reactions on grain surfaces to proceed. This work demonstrates that successive hydrogen addition is probably an important chemistry route in the formation of a number of complex interstellar molecules. We also searched for but did not detect the three-carbon sugar glyceraldehyde (CH2OHCHOHCHO).

  12. The Q(y) absorption spectrum of the light-harvesting complex II as determined by structure-based analysis of chlorophyll macrocycle deformations.

    PubMed

    Zucchelli, Giuseppe; Santabarbara, Stefano; Jennings, Robert C

    2012-04-03

    The absorption spectrum of the main antenna complex of photosystem II, LHCII, has been modeled using, as starting points, the chlorophyll (chl) atomic coordinates as obtained by the LHCII crystal analysis [Liu, Z., Yan, H., Wang, K., Kuang, T., Zhang, J., Gui, L., An, X., and Chang, W. (2004) Nature 428, 287-292] of three different trimers. The chl site Q(y) transition energies have been obtained in terms of the chl macrocycle deformations influencing the energy level of the chl frontier orbitals. Using these chl site transition energy values and the entire set of interaction energies, calculated in the ideal dipole approximation, the complete Hamiltonians for the three LHCII trimers have been written and the full set of 42 eigenstates of each LHCII trimer have been calculated. With the 42 transition energies and transition dipole strengths, either unperturbed or associated to the eigenstates, the LHCII Q(y) absorption spectrum has been calculated using a chl absorption band shape. These calculations have been performed both in vacuo and in the presence of a medium. Despite the number of approximations, a good correlation with the measured absorption spectrum of a LHCII preparation is obtained. This analysis shows that, although a substantial C3 symmetry of the LHCII trimer in terms of both chl-chl distances and interaction energies is present, a marked variation among monomer subsets of site transition energies is estimated. This leads to a C3 symmetry breaking in the unperturbed chl site transition energies set and, consequently, in the trimer eigenstates. It is also concluded that interactions among chlorophylls do not significantly modify the light absorption role of LHCII in plant leaves.

  13. Global Spectrum of Copy Number Variations Reveals Genome Organizational Plasticity and Proposes New Migration Routes

    PubMed Central

    Veerappa, Avinash M.; Manjegowda, Dinesh S.; Ramachandra, Nallur B.

    2015-01-01

    Global spectrum of CNVs is required to catalog variations to provide a high-resolution on the dynamics of genome-organization and human migration. In this study, we performed genome-wide genotyping using high-resolution arrays and identified 44,109 CNVs from 1,715 genomes across 12 populations. The study unraveled the force of independent evolutionary dynamics on genome-organizational plasticity across populations. We demonstrated the use of CNV tool to study human migration and identified a second major settlement establishing new migration routes in addition to existing ones. PMID:25909454

  14. Eye movements reveal no immediate "WOW" ("which one's weird") effect in autism spectrum disorder.

    PubMed

    Benson, Valerie; Castelhano, Monica S; Au-Yeung, Sheena K; Rayner, Keith

    2012-01-01

    Autism spectrum disorder (ASD) and typically developed (TD) adult participants viewed pairs of scenes for a simple "spot the difference" (STD) and a complex "which one's weird" (WOW) task. There were no group differences in the STD task. In the WOW task, the ASD group took longer to respond manually and to begin fixating the target "weird" region. Additionally, as indexed by the first-fixation duration into the target region, the ASD group failed to "pick up" immediately on what was "weird". The findings are discussed with reference to the complex information processing theory of ASD (Minshew & Goldstein, 1998 ).

  15. The asymmetry of (-)α-pinene as revealed from its raman optical activity spectrum.

    PubMed

    Wang, Peijie; Fang, Yan; Wu, Guozhen

    2013-10-01

    An algorithm is employed to retrieve the differential bond polarizabilities of the C-C bonds from the Raman optical activity (ROA) spectrum of (-)α-pinene. (-)α-pinene possesses two asymmetric centers (carbon atoms) and a local mirror symmetry. These differential bond polarizabilities show the characteristics of the asymmetry around the asymmetric carbons with respect to the mirror reflection. This analysis is accompanied along with the ROA mode signatures and the calculated β(G ')(2) and β(A)(2) which show the ROA coupling mechanisms involving the electric/magnetic dipoles and the electric dipole/quadrupole, respectively.

  16. The UV-absorption spectrum of human iridal melanosomes: a new perspective on the relative absorption of eumelanin and pheomelanin and its consequences.

    PubMed

    Peles, Dana N; Simon, John D

    2012-01-01

    Photoemission electron microscopy is used to measure the absorption coefficients, εc, of intact iridal stroma melanosomes isolated from dark brown and blue-green human irides for the spectral range λ=244-310 nm. These iridal stroma melanosomes were chosen because different colored irides produce organelles of varying eumelanin:pheomelanin ratios with similar size and morphology. Similar absorption spectra are found for the two types of melanosomes. The experimental spectra measured within are compared with both the extinction coefficient spectra obtained on soluble synthetic model systems and the monomeric precursors to each pigment.

  17. A Combination of Chemometrics and Quantum Mechanics Methods Applied to Analysis of Femtosecond Transient Absorption Spectrum of Ortho-Nitroaniline

    PubMed Central

    Yi, Jing; Xiong, Ying; Cheng, Kemei; Li, Menglong; Chu, Genbai; Pu, Xuemei; Xu, Tao

    2016-01-01

    A combination of the advanced chemometrics method with quantum mechanics calculation was for the first time applied to explore a facile yet efficient analysis strategy to thoroughly resolve femtosecond transient absorption spectroscopy of ortho-nitroaniline (ONA), served as a model compound of important nitroaromatics and explosives. The result revealed that the ONA molecule is primarily excited to S3 excited state from the ground state and then ultrafast relaxes to S2 state. The internal conversion from S2 to S1 occurs within 0.9 ps. One intermediate state S* was identified in the intersystem crossing (ISC) process, which is different from the specific upper triplet receiver state proposed in some other nitroaromatics systems. The S1 state decays to the S* one within 6.4 ps and then intersystem crossing to the lowest triplet state within 19.6 ps. T1 was estimated to have a lifetime up to 2 ns. The relatively long S* state and very long-lived T1 one should play a vital role as precursors to various nitroaromatic and explosive photoproducts. PMID:26781083

  18. Reconstruction of the absorption spectrum of an object spot from the colour values of the corresponding pixel(s) in its digital image: the challenge of algal colours.

    PubMed

    Coltelli, Primo; Barsanti, Laura; Evangelista, Valter; Frassanito, Anna Maria; Gualtieri, Paolo

    2016-12-01

    A novel procedure for deriving the absorption spectrum of an object spot from the colour values of the corresponding pixel(s) in its image is presented. Any digital image acquired by a microscope can be used; typical applications are the analysis of cellular/subcellular metabolic processes under physiological conditions and in response to environmental stressors (e.g. heavy metals), and the measurement of chromophore composition, distribution and concentration in cells. In this paper, we challenged the procedure with images of algae, acquired by means of a CCD camera mounted onto a microscope. The many colours algae display result from the combinations of chromophores whose spectroscopic information is limited to organic solvents extracts that suffers from displacements, amplifications, and contraction/dilatation respect to spectra recorded inside the cell. Hence, preliminary processing is necessary, which consists of in vivo measurement of the absorption spectra of photosynthetic compartments of algal cells and determination of spectra of the single chromophores inside the cell. The final step of the procedure consists in the reconstruction of the absorption spectrum of the cell spot from the colour values of the corresponding pixel(s) in its digital image by minimization of a system of transcendental equations based on the absorption spectra of the chromophores under physiological conditions.

  19. Solvent effects on the absorption spectrum and first hyperpolarizability of keto-enol tautomeric forms of anil derivatives: A Monte Carlo/quantum mechanics study.

    PubMed

    Adriano Junior, L; Fonseca, T L; Castro, M A

    2016-06-21

    Theoretical results for the absorption spectrum and electric properties of the enol and keto tautomeric forms of anil derivatives in the gas-phase and in solution are presented. The electronic properties in chloroform, acetonitrile, methanol, and water were determined by carrying out sequential Monte Carlo simulations and quantum mechanics calculations based on the time dependent density functional theory and on the second-order Møller-Plesset perturbation theory method. The results illustrate the role played by electrostatic interactions in the electronic properties of anil derivatives in a liquid environment. There is a significant increase of the dipole moment in solution (20%-100%) relative to the gas-phase value. Solvent effects are mild for the absorption spectrum and linear polarizability but they can be particularly important for first hyperpolarizability. A large first hyperpolarizability contrast between the enol and keto forms is observed when absorption spectra present intense lowest-energy absorption bands. Dynamic results for the first hyperpolarizability are in qualitative agreement with the available experimental results.

  20. The CO2 absorption spectrum in the 2.3 μm transparency window by high sensitivity CRDS: (II) Self-absorption continuum

    NASA Astrophysics Data System (ADS)

    Mondelain, D.; Vasilchenko, S.; Čermák, P.; Kassi, S.; Campargue, A.

    2017-01-01

    The CO2 absorption continuum near 2.3 μm is determined for a series of sub atmospheric pressures (250-750 Torr) by high sensitivity Cavity Ring Down Spectroscopy. An experimental procedure consisting in injecting successively a gas flow of CO2 and synthetic air, keeping constant the gas pressure in the CRDS cell, has been developed. This procedure insures a high stability of the spectra baseline by avoiding changes of the optical alignment due to pressure changes. The CO2 continuum was obtained as the difference between the CO2 absorption coefficient and a local lines simulation using a Voigt profile truncated at ±25 cm-1. Following the results of the preceding analysis of the CO2 rovibrational lines (Vasilchenko S et al. J Quant Spectrosc Radiat Transfer 10.1016/j.jqsrt.2016.07.002, a CO2 line list with intensities obtained by variational calculations and empirical line positions was preferred to the HITRAN line list. A quadratic pressure dependence of the absorption continuum is observed, with an average binary absorption coefficient increasing from 2 to 4×10-8 cm-1 amagat-2 between 4320 and 4380 cm-1. The obtained continuum is found in good agreement with a previous measurement using much higher densities (20 amagat) and a low resolution grating spectrograph and is consistent with values currently used in the analysis of Venus spectra.

  1. The rubber hand illusion reveals proprioceptive and sensorimotor differences in autism spectrum disorders.

    PubMed

    Paton, Bryan; Hohwy, Jakob; Enticott, Peter G

    2012-09-01

    Autism spectrum disorder (ASD) is characterised by differences in unimodal and multimodal sensory and proprioceptive processing, with complex biases towards local over global processing. Many of these elements are implicated in versions of the rubber hand illusion (RHI), which were therefore studied in high-functioning individuals with ASD and a typically developing control group. Both groups experienced the illusion. A number of differences were found, related to proprioception and sensorimotor processes. The ASD group showed reduced sensitivity to visuotactile-proprioceptive discrepancy but more accurate proprioception. This group also differed on acceleration in subsequent reach trials. Results are discussed in terms of weak top-down integration and precision-accuracy trade-offs. The RHI appears to be a useful tool for investigating multisensory processing in ASD.

  2. Semantic mapping reveals distinct patterns in descriptions of social relations in adults with autism spectrum disorder.

    PubMed

    Luo, Sean X; Shinall, Jacqueline A; Peterson, Bradley S; Gerber, Andrew J

    2016-08-01

    Adults with autism spectrum disorder (ASD) may describe other individuals differently compared with typical adults. In this study, we first asked participants to describe closely related individuals such as parents and close friends with 10 positive and 10 negative characteristics. We then used standard natural language processing methods to digitize and visualize these descriptions. The complex patterns of these descriptive sentences exhibited a difference in semantic space between individuals with ASD and control participants. Machine learning algorithms were able to automatically detect and discriminate between these two groups. Furthermore, we showed that these descriptive sentences from adults with ASD exhibited fewer connections as defined by word-word co-occurrences in descriptions, and these connections in words formed a less "small-world" like network. Autism Res 2016, 9: 846-853. © 2015 International Society for Autism Research, Wiley Periodicals, Inc.

  3. ACCESS I: An Optical Transmission Spectrum of GJ 1214b Reveals a Heterogeneous Stellar Photosphere

    NASA Astrophysics Data System (ADS)

    Rackham, Benjamin; Espinoza, Néstor; Apai, Dániel; López-Morales, Mercedes; Jordán, Andrés; Osip, David J.; Lewis, Nikole K.; Rodler, Florian; Fraine, Jonathan D.; Morley, Caroline V.; Fortney, Jonathan J.

    2017-01-01

    GJ 1214b is the most studied sub-Neptune exoplanet to date. Recent measurements have shown its near-infrared transmission spectrum to be flat, pointing to a high-altitude opacity source in the exoplanet's atmosphere, either equilibrium condensate clouds or photochemical hazes. Many photometric observations have been reported in the optical by different groups, though simultaneous measurements spanning the entire optical regime are lacking. We present an optical transmission spectrum (4500–9260 Å) of GJ 1214b in 14 bins, measured with Magellan/IMACS repeatedly over three transits. We measure a mean planet-to-star radius ratio of {R}p/{R}s=0.1146+/- 2× {10}-4 and mean uncertainty of σ ({R}p/{R}s)=8.7× {10}-4 in the spectral bins. The optical transit depths are shallower on average than observed in the near-infrared. We present a model for jointly incorporating the effects of a composite photosphere and atmospheric transmission through the exoplanet's limb (the CPAT model), and use it to examine the cases of absorber and temperature heterogeneities in the stellar photosphere. We find the optical and near-infrared measurements are best explained by the combination of (1) photochemical haze in the exoplanetary atmosphere with a mode particle size r = 0.1 μm and haze-forming efficiency {f}{haze}=10 % and (2) faculae in the unocculted stellar disk with a temperature contrast {{Δ }}T={354}-46+46 K, assuming 3.2% surface coverage. The CPAT model can be used to assess potential contributions of heterogeneous stellar photospheres to observations of exoplanet transmission spectra, which will be important for searches for spectral features in the optical.

  4. The HD spectrum near 2.3 μm by CRDS-VECSEL: Electric quadrupole transition and collision-induced absorption

    NASA Astrophysics Data System (ADS)

    Vasilchenko, S.; Mondelain, D.; Kassi, S.; Čermák, P.; Chomet, B.; Garnache, A.; Denet, S.; Lecocq, V.; Campargue, A.

    2016-08-01

    The HD absorption spectrum is investigated near 2.3 μm with the help of a newly developed Cavity Ring Down Spectrometer (CRDS) using a VECSEL (Vertical External Cavity Surface Emitting Laser) as light source. The HD CRDS spectra were recorded for a series of ten pressure values in the range 50-650 Torr. The sensitivity of the recordings - noise equivalent absorption of the spectra on the order of αmin ≈ 5 × 10-10 cm-1 - has allowed for the first detection of the S(3) quadrupole electric transition of the HD fundamental band, at 4359.940 cm-1. The line center determined with an uncertainty of 0.002 cm-1 agrees with the most recent theoretical calculations. The retrieved value of the line intensity (2.5 × 10-27 cm/molecule at 296 K) agrees within 12% with the ab initio values included in the HITRAN spectroscopic database. We take the opportunity of this contribution to provide an exhaustive review of seventy-three HD absorption lines previously detected up to 20,000 cm-1. From the pressure dependence of the baseline of the CRDS spectra, the binary absorption coefficient of the HD collision induced absorption band is determined to be 1.17(4) × 10-6 cm-1amagat-2 at 4360 cm-1.

  5. The effect of deformation and intermolecular interaction on the absorption spectrum of 5-aminotetrazole and hydrazine: A computational molecular spectroscopy study on hydrazinium 5-aminotetrazolate

    NASA Astrophysics Data System (ADS)

    Farrokhpour, H.; Dehbozorgi, A.; Manassir, M.; Najafi Chermahini, A.

    2016-03-01

    In the present work, the UV absorption spectra of seven complexes of hydrazinium 5-aminotetrazolate (HY-5AT), in the range of 4-12 eV, were calculated in both gas and water. The UV absorption spectra of the selected HY-5AT complexes were also calculated in the absence of the intermolecular interaction between 5-aminotetrazole (5AT) and hydrazine (HY) and compared with the calculated UV absorption spectra of isolated HY and 5AT in the gas phase to see the effect of deformation on the electronic structures of the fragments. In addition, the calculated spectra of HY-5AT complexes were compared with the corresponding calculated spectra of HY-5AT complexes in the absence of the interaction between HY and 5AT to see the effect of interaction between two fragments on the absorption spectra of the complexes. Similar studies were performed on the most stable structure of HY-5AT complex in water and different trend was observed for the effect of deformation and interaction on the absorption spectrum of complex compared to the gas phase.

  6. Multi-mode interference revealed by two photon absorption in silicon rich SiO{sub 2} waveguides

    SciTech Connect

    Manna, S. E-mail: mattia.mancinelli@unitn.it; Ramiro-Manzano, F.; Mancinelli, M. E-mail: mattia.mancinelli@unitn.it; Turri, F.; Pavesi, L.; Ghulinyan, M.; Pucker, G.

    2015-02-16

    Photoluminescence (PL) from Si nanocrystals (NCs) excited by two-photon absorption (TPA) has been observed in Si nanocrystal-based waveguides fabricated by plasma enhanced chemical vapor deposition. The TPA excited photoluminescence emission resembles the one-photon excited photoluminescence arising from inter-band transitions in the quantum confined Si nanocrystals. By measuring the non-linear transmission of waveguides, a large TPA coefficient of β up to 10{sup −8 }cm/W has been measured at 1550 nm. These values of β depend on the Si NCs size and are two orders of magnitude larger than the bulk silicon value. Here, we propose to use the TPA excited visible PL emission as a tool to map the spatial intensity profile of the 1550 nm propagating optical modes in multimode waveguides. In this way, multimode interference has been revealed experimentally and confirmed through a finite element simulation.

  7. Molar absorptivities of glucose and other biological molecules in aqueous solutions over the first overtone and combination regions of the near-infrared spectrum.

    PubMed

    Amerov, Airat K; Chen, Jun; Arnold, Mark A

    2004-10-01

    Molar absorptivities are measured for water, glucose, alanine, ascorbate, lactate, triacetin, and urea in the near-infrared spectral region at 37 degrees C. Values are based on the Beer-Lambert law and cover the first overtone (1550-1850 nm; 6450-5400 cm(-1)) and combination (2000-2500 nm; 4000-5000 cm(-1)) spectral windows through aqueous media. Accurate calculations demand accounting for the impact of water displacement upon dissolution of solute. In this regard, water displacement coefficients are measured and reported for each solute. First overtone absorptivities range from 2 to 7 x 10(-5) mM(-1)mm(-1) for all solutes except urea, for which absorptivity values are below 0.5 x 10(-5) mM(-1) mm(-1) across this spectral range. Molar absorptivities over the combination spectral region range from 0.8 to 3.2 x 10(-4) mM(-1) mm(-1), which is a factor of four to five greater than the first overtone absorptivities. Accuracy of the measured values is assessed by comparing calculated or modeled spectra with spectra measured from standard solutions. This comparison reveals accurately modeled spectra in terms of magnitude and position of solute absorption bands. Both actual and modeled spectra from glucose solutions reveal positive and negative absorbance values depending on the measurement wavelength. It is shown that the net absorbance of light is controlled by the magnitude of the absorptivity of glucose compared to the product of the absorptivity of water and the water displacement coefficient for glucose.

  8. PRICKLE1 Interaction with SYNAPSIN I Reveals a Role in Autism Spectrum Disorders

    PubMed Central

    Paemka, Lily; Mahajan, Vinit B.; Skeie, Jessica M.; Sowers, Levi P.; Ehaideb, Salleh N.; Gonzalez-Alegre, Pedro; Sasaoka, Toshikuni; Tao, Hirotaka; Miyagi, Asuka; Ueno, Naoto; Takao, Keizo; Miyakawa, Tsuyoshi; Wu, Shu; Darbro, Benjamin W.; Ferguson, Polly J.; Pieper, Andrew A.; Britt, Jeremiah K.; Wemmie, John A.; Rudd, Danielle S.; Wassink, Thomas; El-Shanti, Hatem; Mefford, Heather C.; Carvill, Gemma L.; Manak, J. Robert; Bassuk, Alexander G.

    2013-01-01

    The frequent comorbidity of Autism Spectrum Disorders (ASDs) with epilepsy suggests a shared underlying genetic susceptibility; several genes, when mutated, can contribute to both disorders. Recently, PRICKLE1 missense mutations were found to segregate with ASD. However, the mechanism by which mutations in this gene might contribute to ASD is unknown. To elucidate the role of PRICKLE1 in ASDs, we carried out studies in Prickle1+/− mice and Drosophila, yeast, and neuronal cell lines. We show that mice with Prickle1 mutations exhibit ASD-like behaviors. To find proteins that interact with PRICKLE1 in the central nervous system, we performed a yeast two-hybrid screen with a human brain cDNA library and isolated a peptide with homology to SYNAPSIN I (SYN1), a protein involved in synaptogenesis, synaptic vesicle formation, and regulation of neurotransmitter release. Endogenous Prickle1 and Syn1 co-localize in neurons and physically interact via the SYN1 region mutated in ASD and epilepsy. Finally, a mutation in PRICKLE1 disrupts its ability to increase the size of dense-core vesicles in PC12 cells. Taken together, these findings suggest PRICKLE1 mutations contribute to ASD by disrupting the interaction with SYN1 and regulation of synaptic vesicles. PMID:24312498

  9. Effects of ionizable residues on the absorption spectrum and initial electron-transfer kinetics in the photosynthetic reaction center of Rhodobacter sphaeroides.

    PubMed

    Johnson, E T; Nagarajan, V; Zazubovich, V; Riley, K; Small, G J; Parson, W W

    2003-11-25

    Effects of ionizable amino acids on spectroscopic properties and electron-transfer kinetics in the photosynthetic reaction center (RC) of Rhodobacter sphaeroides are investigated by site-directed mutations designed to alter the electrostatic environment of the bacteriochlorophyll dimer that serves as the photochemical electron donor (P). Arginine residues at homologous positions in the L and M subunits (L135 and M164) are changed independently: Arg L135 is replaced by Lys, Leu, Glu, and Gln and Arg M164 by Leu and Glu. Asp L155 also is mutated to Asn, Tyr L164 to Phe, and Cys L247 to Lys and Asp. The mutations at L155, L164, and M164 have little effect on the absorption spectrum, whereas those at L135 and L247 shift the long-wavelength absorption band of P to higher energies. Fits to the ground-state absorption and hole-burned spectra indicate that the blue shift and increased width of the absorption band in the L135 mutants are due partly to changes in the distribution of energies for the zero-phonon absorption line and partly to stronger electron-phonon coupling. The initial electron-transfer kinetics are not changed significantly in most of the mutants, but the time constant increases from 3.0 +/- 0.2 in wild-type RCs to 4.7 +/- 0.2 in C(L247)D and 7.0 +/- 0.3 ps in C(L247)K. The effects of the mutations on the solvation free energies of the product of the initial electron-transfer reaction (P(+)) and the charge-transfer states that contribute to the absorption spectrum ( and ) were calculated by using a distance-dependent electrostatic screening factor. The results are qualitatively in accord with the view that electrostatic interactions of the bacteriochlorophylls with ionized residues of the protein are strongly screened and make only minor contributions to the energetics and dynamics of charge separation. However, the slowing of electron transfer in the Cys L247 mutants and the blue shift of the spectrum in some of the Arg L135 and Cys L247 mutants cannot be

  10. The Near Infrared Absorption Spectrum of Water by CRDS Between 1.26-1.70 µm:Complete Empirical Line List and Continuum Absorption

    NASA Astrophysics Data System (ADS)

    Mondelain, Didier; Campargue, Alain; Kassi, Samir; Mikhailenko, Semen

    2014-06-01

    Due to the increasing performances of Airborne- and ground-based spectrometers, a more and more accurate characterization of the water vapor absorption is required. This is especially true in the transparency windows, corresponding to low absorption spectral regions widely used for probing the Earth's atmosphere. State-of-the-art experimental developments are required to fulfill the needs in terms of accuracy of the spectroscopic data. For that purpose, we are using high-sensitivity Continuous Wave Cavity Ring Down Spectroscopy (CW-CRDS) allowing reproducing in laboratory conditions comparable to the atmospheric ones in terms of absorption path length (tens of kilometers), temperature and pressure. From extensive analysis of our CRDS spectra, we have constructed an empirical line list for "natural" water vapor at 296 K in the 5850 7920 cm-1 region including 38 318 transitions of four major water isotopologues (H2 16O, H218O, H217O and HD16O) with an intensity cut-off of 1·10-29 cm/molecule. The list is made mostly complete over the whole spectral region by including a large number of unobserved weak lines with positions calculated using experimentally determined energy levels and intensities obtained from variational calculations. In addition, we provide HD18O and HD 17O lists in the same region for transitions with intensities larger than 1·10-29 cm/molecule. The HD18O and HD17O lists (1 972 lines in total) were obtained using empirical energy levels available in the literature and variational intensities. The global list (40 290 transitions) including the contribution of the six major isotopologues has been adopted for the new edition of the GEISA database in the region. The advantages and drawbacks of our list will be discussed in comparison with the list provided for the same region in the 2012 edition of the HITRAN database. Separate experiments were dedicated to the measurement of the water vapor self-continuum crosssections in the 1.6 µm window by CW

  11. Whole-exome sequencing reveals the mutational spectrum of testicular germ cell tumours.

    PubMed

    Litchfield, Kevin; Summersgill, Brenda; Yost, Shawn; Sultana, Razvan; Labreche, Karim; Dudakia, Darshna; Renwick, Anthony; Seal, Sheila; Al-Saadi, Reem; Broderick, Peter; Turner, Nicholas C; Houlston, Richard S; Huddart, Robert; Shipley, Janet; Turnbull, Clare

    2015-01-22

    Testicular germ cell tumours (TGCTs) are the most common cancer in young men. Here we perform whole-exome sequencing (WES) of 42 TGCTs to comprehensively study the cancer's mutational profile. The mutation rate is uniformly low in all of the tumours (mean 0.5 mutations per Mb) as compared with common cancers, consistent with the embryological origin of TGCT. In addition to expected copy number gain of chromosome 12p and mutation of KIT, we identify recurrent mutations in the tumour suppressor gene CDC27 (11.9%). Copy number analysis reveals recurring amplification of the spermatocyte development gene FSIP2 (15.3%) and a 0.4 Mb region at Xq28 (15.3%). Two treatment-refractory patients are shown to harbour XRCC2 mutations, a gene strongly implicated in defining cisplatin resistance. Our findings provide further insights into genes involved in the development and progression of TGCT.

  12. Whole-exome sequencing reveals the mutational spectrum of testicular germ cell tumours

    PubMed Central

    Litchfield, Kevin; Summersgill, Brenda; Yost, Shawn; Sultana, Razvan; Labreche, Karim; Dudakia, Darshna; Renwick, Anthony; Seal, Sheila; Al-Saadi, Reem; Broderick, Peter; Turner, Nicholas C.; Houlston, Richard S.; Huddart, Robert; Shipley, Janet; Turnbull, Clare

    2015-01-01

    Testicular germ cell tumours (TGCTs) are the most common cancer in young men. Here we perform whole-exome sequencing (WES) of 42 TGCTs to comprehensively study the cancer's mutational profile. The mutation rate is uniformly low in all of the tumours (mean 0.5 mutations per Mb) as compared with common cancers, consistent with the embryological origin of TGCT. In addition to expected copy number gain of chromosome 12p and mutation of KIT, we identify recurrent mutations in the tumour suppressor gene CDC27 (11.9%). Copy number analysis reveals recurring amplification of the spermatocyte development gene FSIP2 (15.3%) and a 0.4 Mb region at Xq28 (15.3%). Two treatment-refractory patients are shown to harbour XRCC2 mutations, a gene strongly implicated in defining cisplatin resistance. Our findings provide further insights into genes involved in the development and progression of TGCT. PMID:25609015

  13. Theoretical investigation of the structure and electronic absorption spectrum of a complex zinc bis-[8-(3,5-difluorophenylsulfanylamino)quinolinate

    NASA Astrophysics Data System (ADS)

    Minaev, B. F.; Baryshnikov, G. V.; Korop, A. A.; Minaeva, V. A.; Kaplunov, M. G.

    2012-09-01

    Using the quantum-chemical methods of the density functional theory DFT/B3LYP/DGDZVP, of the electron density topological analysis QTAIM, and of the time-dependent density functional theory TDDFT/BMK/DGDZVP, we have studied the structure and spectral properties of the electroluminescent complex zinc bis-[8-(3,5-difluorophenylsulfanylamino)quinolinate]. Good agreement of calculation results with experimental data on the electron density topological characteristics and on the absorption spectrum in the visible and UV ranges has been obtained. Based on the analysis of orbitals and wave functions of the TDDFT/BMK/DGDZVP method, we have elucidated the nature of absorption bands of the complex under study.

  14. Measurement of absorption spectrum of deuterium oxide (D{sub 2}O) and its application to signal enhancement in multiphoton microscopy at the 1700-nm window

    SciTech Connect

    Wang, Yuxin; Wen, Wenhui; Wang, Kai; Wang, Ke; Zhai, Peng; Qiu, Ping

    2016-01-11

    1700-nm window has been demonstrated to be a promising excitation window for deep-tissue multiphoton microscopy (MPM). Long working-distance water immersion objective lenses are typically used for deep-tissue imaging. However, absorption due to immersion water at 1700 nm is still high and leads to dramatic decrease in signals. In this paper, we demonstrate measurement of absorption spectrum of deuterium oxide (D{sub 2}O) from 1200 nm to 2600 nm, covering the three low water-absorption windows potentially applicable for deep-tissue imaging (1300 nm, 1700 nm, and 2200 nm). We apply this measured result to signal enhancement in MPM at the 1700-nm window. Compared with water immersion, D{sub 2}O immersion enhances signal levels in second-harmonic generation imaging, 3-photon fluorescence imaging, and third-harmonic generation imaging by 8.1, 24.8, and 24.7 times with 1662-nm excitation, in good agreement with theoretical calculation based on our absorption measurement. This suggests D{sub 2}O a promising immersion medium for deep-tissue imaging.

  15. The 13CH4 absorption spectrum in the Icosad range (6600-7692 cm-1) at 80 K and 296 K: Empirical line lists and temperature dependence

    NASA Astrophysics Data System (ADS)

    Campargue, A.; Béguier, S.; Zbiri, Y.; Mondelain, D.; Kassi, S.; Karlovets, E. V.; Nikitin, A. V.; Rey, M.; Starikova, E. N.; Tyuterev, Vl. G.

    2016-08-01

    The 13CH4 absorption spectrum has been recorded at 296 K and 80 K in the Icosad range between 6600 and 7700 cm-1. The achieved noise equivalent absorption of the spectra recorded by differential absorption spectroscopy (DAS) is about αmin ≈ 1.5 × 10-7 cm-1. Two empirical line lists were constructed including 17,792 and 24,139 lines at 80 K and 296 K, respectively. For comparison, the HITRAN database provides only 1040 13CH4 lines in the region determined from methane spectra with natural isotopic abundance. Empirical values of the lower state energy level, Eemp, were systematically derived from the intensity ratios of the lines measured at 80 K and 296 K. Overall 10,792 Eemp values were determined providing accurate temperature dependence for most of the 13CH4 absorption in the region (93% and 82% at 80 K and 296 K, respectively). The quality of the derived empirical values of the lower state rotational quantum number, Jemp, is illustrated by their clear propensity to be close to an integer. A good agreement is achieved between our small Jemp values, with previous accurate determinations obtained by applying the 2T method to jet and 80 K spectra. The line lists at 296 K and 80 K which are provided as Supplementary material will be used for future rovibrational assignments based on accurate variational calculations.

  16. Nustar Reveals an Intrinsically X-ray Weak Broad Absorption Line Quasar in the Ultraluminous Infrared Galaxy Markarian 231

    NASA Technical Reports Server (NTRS)

    Teng, Stacy H.; Brandt. W. N.; Harrison, F. A.; Luo, B.; Alexander, D. M.; Bauer, F. E.; Boggs, S. E.; Christensen, F. E.; Comastri, A.; Craig, W. W.; Fabian, A. C.; Farrah, D.; Fiore, F.; Gandhi, P.; Grefenstette, B. W.; Hailey, C. J.; Hickox, R. C.; Madsen, K. K.; Ptak, A. F.; Rigby, Jane Rebecca; Risaliti, G.; Saz, C.; Stern, D.; Veilleux, S.; Walton, D. J.; Wik, D. R.; Zhang, W. W.

    2014-01-01

    We present high-energy (3-30 keV) NuSTAR observations of the nearest quasar, the ultraluminous infrared galaxy (ULIRG) Markarian 231 (Mrk 231), supplemented with new and simultaneous low-energy (0.5-8 keV) data from Chandra. The source was detected, though at much fainter levels than previously reported, likely due to contamination in the large apertures of previous non-focusing hard X-ray telescopes. The full band (0.5-30 keV) X-ray spectrum suggests the active galactic nucleus (AGN) in Mrk 231 is absorbed by a patchy and Compton-thin N(sub H) approx. 1.2(sup +0.3) sub-0.3) x 10(exp 23) / sq cm) column. The intrinsic X-ray luminosity L(sub 0.5-30 Kev) approx. 1.0 x 10(exp 43) erg /s) is extremely weak relative to the bolometric luminosity where the 2-10 keV to bolometric luminosity ratio is approx. 0.03% compared to the typical values of 2-15%. Additionally, Mrk 231 has a low X-ray-to-optical power law slope alpha(sub 0X) approx. -1.7. It is a local example of a low-ionization broad absorption line (LoBAL) quasar that is intrinsically X-ray weak. The weak ionizing continuum may explain the lack of mid-infrared [O IV], [Ne V], and [Ne VI] fine-structure emission lines which are present in sources with otherwise similar AGN properties. We argue that the intrinsic X-ray weakness may be a result of the super-Eddington accretion occurring in the nucleus of this ULIRG, and may also be naturally related to the powerful wind event seen in Mrk 231, a merger remnant escaping from its dusty cocoon.

  17. Electronic Absorption Spectra from MM and ab initio QM/MM Molecular Dynamics: Environmental Effects on the Absorption Spectrum of Photoactive Yellow Protein

    PubMed Central

    Isborn, Christine M.; Götz, Andreas W.; Clark, Matthew A.; Walker, Ross C.; Martínez, Todd J.

    2012-01-01

    We describe a new interface of the GPU parallelized TeraChem electronic structure package and the Amber molecular dynamics package for quantum mechanical (QM) and mixed QM and molecular mechanical (MM) molecular dynamics simulations. This QM/MM interface is used for computation of the absorption spectra of the photoactive yellow protein (PYP) chromophore in vacuum, aqueous solution, and protein environments. The computed excitation energies of PYP require a very large QM region (hundreds of atoms) covalently bonded to the chromophore in order to achieve agreement with calculations that treat the entire protein quantum mechanically. We also show that 40 or more surrounding water molecules must be included in the QM region in order to obtain converged excitation energies of the solvated PYP chromophore. These results indicate that large QM regions (with hundreds of atoms) are a necessity in QM/MM calculations. PMID:23476156

  18. Keto-enol tautomerism and conformational landscape of 1,3-cyclohexanedione from its free jet millimeter-wave absorption spectrum.

    PubMed

    Calabrese, Camilla; Maris, Assimo; Evangelisti, Luca; Favero, Laura B; Melandri, Sonia; Caminati, Walther

    2013-12-19

    The free jet millimeter-wave absorption spectrum of 1,3-cyclohexanedione has been investigated in the 59.6-74.4 GHz frequency range, and the rotational spectra of two conformational species, the chair-diketo and boat-diketo, and probably one excited vibrational state belonging to the chair-diketo form have been assigned. Quantum chemical calculations, performed at the B3LYP/6-311++G** and MP2/6-311++G** levels, were used to characterize the potential energy surface minima. The potential energy surface related to the interconversion of the observed diketonic species was modeled at the DFT level.

  19. Raman spectrum reveals the cell cycle arrest of Triptolide-induced leukemic T-lymphocytes apoptosis

    NASA Astrophysics Data System (ADS)

    Zhang, Daosen; Feng, Yanyan; Zhang, Qinnan; Su, Xin; Lu, Xiaoxu; Liu, Shengde; Zhong, Liyun

    2015-04-01

    Triptolide (TPL), a traditional Chinese medicine extract, possesses anti-inflammatory and anti-tumor properties. Though some research results have implicated that Triptolide (TPL) can be utilized in the treatment of leukemia, it remains controversial about the mechanism of TPL-induced leukemic T-lymphocytes apoptosis. In this study, combining Raman spectroscopic data, principal component analysis (PCA) and atomic force microscopy (AFM) imaging, both the biochemical changes and morphological changes during TPL-induced cell apoptosis were presented. In contrast, the corresponding data during Daunorubicin (DNR)-induced cell apoptosis was also exhibited. The obtained results showed that Raman spectral changes during TPL-induced cell apoptosis were greatly different from DNR-induced cell apoptosis in the early stage of apoptosis but revealed the high similarity in the late stage of apoptosis. Moreover, above Raman spectral changes were respectively consistent with the morphological changes of different stages during TPL-induced apoptosis or DNR-induced apoptosis, including membrane shrinkage and blebbing, chromatin condensation and the formation of apoptotic bodies. Importantly, it was found that Raman spectral changes with TPL-induced apoptosis or DNR-induced apoptosis were respectively related with the cell cycle G1 phase arrest or G1 and S phase arrest.

  20. Integrated systems analysis reveals a molecular network underlying autism spectrum disorders.

    PubMed

    Li, Jingjing; Shi, Minyi; Ma, Zhihai; Zhao, Shuchun; Euskirchen, Ghia; Ziskin, Jennifer; Urban, Alexander; Hallmayer, Joachim; Snyder, Michael

    2014-12-30

    Autism is a complex disease whose etiology remains elusive. We integrated previously and newly generated data and developed a systems framework involving the interactome, gene expression and genome sequencing to identify a protein interaction module with members strongly enriched for autism candidate genes. Sequencing of 25 patients confirmed the involvement of this module in autism, which was subsequently validated using an independent cohort of over 500 patients. Expression of this module was dichotomized with a ubiquitously expressed subcomponent and another subcomponent preferentially expressed in the corpus callosum, which was significantly affected by our identified mutations in the network center. RNA-sequencing of the corpus callosum from patients with autism exhibited extensive gene mis-expression in this module, and our immunochemical analysis showed that the human corpus callosum is predominantly populated by oligodendrocyte cells. Analysis of functional genomic data further revealed a significant involvement of this module in the development of oligodendrocyte cells in mouse brain. Our analysis delineates a natural network involved in autism, helps uncover novel candidate genes for this disease and improves our understanding of its molecular pathology.

  1. Measurement and theoretical characterization of electronic absorption spectrum of neutral chrysene (C18H12)and its positive ion in H3BO3 matrix.

    PubMed

    Husain, Mudassir M

    2007-09-01

    The ultraviolet and visible spectrum of chrysene and its radical cation formed by ultraviolet irradiation were measured in boric acid glass at room temperature. The theoretical electronic absorption spectrum of any polycyclic aromatic hydrocarbon (PAH) in boric acid matrix is calculated for the first time using semi empirical methods. Earlier reported theoretical results of electronic spectrum are calculated in free state and the results are compared with the spectrum of aromatic systems in glassy or other matrices. The interaction between the trapped PAHs (neutral and ions) and its environment induces strong perturbations of the energy levels which results in large shifts of the electronic transitions as compared to the ideal case of a free, isolated PAH molecule. This shifting due to perturbation has largely been ignored in earlier calculations, while comparing the calculations with the experimentally measured spectrum, in other matrices. The spectrum of singlet and doublet state of chrysene are computed in aqueous medium and also in free state to estimate the spectral shift. Several other geometric (bond length and bond angles) and spectroscopic parameters of chrysene like difference of HOMO-LUMO, ionization potential, dipole moment and polarizability are calculated using semi empirical methods, namely Austin Model 1 (AM1) and Parametric Method 3 (PM3). To get an idea about how the symmetry of chrysene molecule varies upon ionization, the mean polarizability (alpha) as well as its tensor components alpha(xx), alpha(yy) and alpha(zz) are calculated within a field of 0.005 a.u. The lasing action in neutral chrysene and in its cationic form is also discussed for the first time.

  2. Raman spectrum reveals Mesenchymal stem cells inhibiting HL60 cells growth

    NASA Astrophysics Data System (ADS)

    Su, Xin; Fang, Shaoyin; Zhang, Daosen; Zhang, Qinnan; Lu, Xiaoxu; Tian, Jindong; Fan, Jinping; LiyunZhong

    2017-04-01

    Though some research results reveals that Mesenchymal stem cells (MSCs) have the ability of inhibiting tumor cells proliferation, it remains controversial about the precise interaction mechanism during MSCs and tumor cells co-culture. In this study, combing Raman spectroscopic data and principle component analysis (PCA), the biochemical changes of MSCs or Human promyelocytic leukemia (HL60) cells during their co-culture were presented. The obtained results showed that some main Raman peaks of HL60 assigned to nucleic acids or proteins were greatly higher in intensity in the late stage of co-culture than those in the early stage of co-culture while they were still lower relative to the control group, implicating that the effect of MSCs inhibiting HL60 proliferation appeared in the early stage but gradually lost the inhibiting ability in the late stage of co-culture. Moreover, some other peaks of HL60 assigned to proteins were decreased in intensity in the early stage of co-culture relative to the control group but rebounded to the level similar to the control group in the late stage, showing that the content and structure changes of these proteins might be generated in the early stage but returned to the original state in the late stage of co-culture. As a result, in the early stage of MSCs-HL60 co-culture, along with the level of Akt phosphorylation of HL60 was lowered relative to its control group, the proliferation rate of HL60 cells was decreased. And in the late stage of co-culture, along with the level of Akt phosphorylation was rebounded, the reverse transfer of Raman peaks within 875-880 cm- 1 appeared, thus MSCs lost the ability to inhibit HL60 growth and HL60 proliferation was increased. In addition, it was observed that the peak at 811 cm- 1, which is a marker of RNA, was higher in intensity in the late stage than that in the control group, indicating that MSCs might be differentiated into myofibroblast-like MSCs. In addition, PCA results also exhibited

  3. A Simple Analytical Approximation to an Inhomogeneously-Broadened Dispersion Spectrum. Application to Absorption-Dispersion Admixtures.

    PubMed

    Bales, Barney L

    2016-09-19

    A simple analytical approximation to an inhomogeneously-broadened dispersion signal is proposed and tested with resonance lines broadened by unresolved hyperfine structure. Spectral parameters may be rapidly and accurately extracted using a nonlinear least-squares fitting algorithm. Combining the new approximation to a dispersion signal with a well-known approximation to the absorption signal allows dispersion-absorption admixtures, a problem of growing importance, to be analyzed quickly and accurately. For pure dispersion signals, the maximum difference between the fit and the signal for unresolved lines is 1.1 % of the maximum intensity. For pure absorption, the difference is 0.33 % of the peak-to-peak intensity, and for admixtures up to 40 % dispersion (maximum intensity/peak-to-peak intensity), the difference is 0.7 %. The accuracy of the recovered spectral parameters depends on the degree of inhomogeneously-broadened and the percentage admixture, but they are generally about 1 % at most. A significant finding of the work is that the parameters pertinent to the dispersion or the absorption are insignificantly different when fitting isolated lines vs. fitting admixtures. Admixtures with added noise or an unsuspected extraneous line are investigated.

  4. Spectrum of induced absorption of oxygen in mixtures with various gases in the region of the Herzberg photodissociation continuum

    NASA Astrophysics Data System (ADS)

    Zelikina, G. Y.; Kiseleva, M. B.; Burtsev, Andrei P.; Bertsev, V. V.

    1999-01-01

    Values of the binary absorption coefficients are obtained for the region of Herzberg photodissociation continuum in mixtures of oxygen with various foreign gases X, where X - Ar, Kr, Xe, N2, N2O, CH4, C3H8, CO2, NH3, NF3, SF6, CF4, C2F6, C3F8, CF3H, CF3Cl, CF3Br, CF2ClH, CF2Cl2 - group I (the ionization potential of molecules >= 11 eV) and C2H4, CF3I, C2F5I - group II (the ionization potential < 11 eV). The induced absorption of the mixtures of O2 with gases from group I is found to result from the Herzberg III band of oxygen. The obtained regular dependence of the intensity of induced absorption in an O2 - X pair on the ionization potential of a molecule X, confirms the hypothesis that excited electronic states of the ionic type of the molecular pair serve as the main intensity source for the Herzberg III band. The long-wavelength wing of the charge transfer band of the O2 - X pair is shown to contribute to the induced absorption of the mixtures of O2 with gases from group II.

  5. Multiple pre-edge structures in Cu K -edge x-ray absorption spectra of high- Tc cuprates revealed by high-resolution x-ray absorption spectroscopy

    NASA Astrophysics Data System (ADS)

    Gougoussis, C.; Rueff, J.-P.; Calandra, M.; D'Astuto, M.; Jarrige, I.; Ishii, H.; Shukla, A.; Yamada, I.; Azuma, M.; Takano, M.

    2010-06-01

    Using high-resolution x-ray absorption spectroscopy and state-of-the-art electronic structure calculations we demonstrate that the pre-edge region at the Cu K edge of high- Tc cuprates is composed of several excitations invisible in standard x-ray absorption spectra. We consider in detail the case of Ca2-xCuO2Cl2 and show that the many pre-edge excitations (two for c -axis polarization, four for in-plane polarization and out-of-plane incident x-ray momentum) are dominated by off-site transitions and intersite hybridization. This demonstrates the relevance of approaches beyond the single-site model for the description of the pre edges of correlated materials. Finally, we show the occurrence of a doubling of the main edge peak that is most visible when the polarization is along the c axis. This doubling, that has not been seen in any previous absorption data in cuprates, is not reproduced by first-principles calculations. We suggest that this peak is due to many-body charge-transfer excitations while all the other visible far-edge structures are single particle in origin. Our work indicates that previous interpretations of the Cu K -edge x-ray absorption spectra in high- Tc cuprates can be profitably reconsidered.

  6. A QM/MM study of the absorption spectrum of harmane in water solution and interacting with DNA: the crucial role of dynamic effects.

    PubMed

    Etienne, Thibaud; Very, Thibaut; Perpète, Eric A; Monari, Antonio; Assfeld, Xavier

    2013-05-02

    We present a time-dependent density functional theory computation of the absorption spectra of one β-carboline system: the harmane molecule in its neutral and cationic forms. The spectra are computed in aqueous solution. The interaction of cationic harmane with DNA is also studied. In particular, the use of hybrid quantum mechanics/molecular mechanics methods is discussed, together with its coupling to a molecular dynamics strategy to take into account dynamic effects of the environment and the vibrational degrees of freedom of the chromophore. Different levels of treatment of the environment are addressed starting from purely mechanical embedding to electrostatic and polarizable embedding. We show that a static description of the spectrum based on equilibrium geometry only is unable to give a correct agreement with experimental results, and dynamic effects need to be taken into account. The presence of two stable noncovalent interaction modes between harmane and DNA is also presented, as well as the associated absorption spectrum of harmane cation.

  7. Nitryl chloride (ClNO2): UV/vis absorption spectrum between 210 and 296 K and O(3P) quantum yield at 193 and 248 nm.

    PubMed

    Ghosh, Buddhadeb; Papanastasiou, Dimitrios K; Talukdar, Ranajit K; Roberts, James M; Burkholder, James B

    2012-06-21

    Recent studies have shown that the UV/vis photolysis of nitryl chloride (ClNO2) can be a major source of reactive chlorine in the troposphere. The present work reports measurements of the ClNO2 absorption spectrum and its temperature dependence between 210 and 296 K over the wavelength range 200–475 nm using diode array spectroscopy. The room temperature spectrum obtained in this work was found to be in good agreement with the results from Ganske et al. (J. Geophys. Res. 1992, 97, 7651) over the wavelength range common to both studies (200–370 nm) but differs systematically from the currently recommended spectrum for use in atmospheric models. The present results lead to a decrease in the calculated atmospheric ClNO2 photolysis rate by 30%. Including the temperature dependence of the ClNO2 spectrum decreases the calculated atmospheric photolysis rate at lower temperatures (higher altitudes) even further. A parametrization of the wavelength and temperature dependence of the ClNO2 spectrum is presented. O(3P) quantum yields, Φ(ClNO2)(O), in the photolysis of ClNO2 at 193 and 248 nm were measured at 296 K using pulsed laser photolysis combined with atomic resonance fluorescence detection of O(3P) atoms. Φ(ClNO2)(O)(λ) was found to be 0.67 ± 0.12 and 0.15 ± 0.03 (2σ error limits, including estimated systematic errors) at 193 and 248 nm, respectively, indicating that multiple dissociation channels are active in the photolysis of ClNO2 at these wavelengths. The Φ(ClNO2)(O)(λ) values obtained in this work are discussed in light of previous ClNO2 photodissociation studies and the differences are discussed.

  8. Localized absorption in aluminum mask in visible spectrum due to longitudinal modes in vertical silicon nanowire arrays

    NASA Astrophysics Data System (ADS)

    Dhindsa, Navneet; Saini, Simarjeet Singh

    2015-06-01

    Localized optical absorption in aluminum masks used for vertical silicon nanowire fabrication is demonstrated experimentally and supported using computer simulations. The mask is in the form of 30 nm thick aluminum nano-disks on top of silicon nanowires arranged in square lattices. The nanowires are 1 μm long, with diameters ranging from 60 nm to 100 nm and spaced 400 nm apart. New spectral features appear in the 500 nm-700 nm wavelengths range and are dependent on both the nanowire diameter and length. The former is due to the excitation of radial modes, whereas the latter stems from longitudinal (Fabry-Perot) resonances. The salient features associated with absorption in the aluminum mask and the role nanowire plays in this connection are discussed.

  9. Diagnosing the reionization of the universe - The absorption spectrum of the intergalactic medium and Lyman alpha clouds

    NASA Technical Reports Server (NTRS)

    Giroux, Mark L.; Shapiro, Paul R.

    1991-01-01

    The thermal and ionization evolution of a uniform intergalactic medium composed of H and He and undergoing reionization is studied. The diagnosis of the metagalactic ionizing radiation background at z of about three using metal line ratios for Lyman limit quasar absorption line systems is addressed. The use of the He II Gunn-Peterson effect to diagnose the reionization source and/or nature of the Hy-alpha forest clouds is considered.

  10. Chandra Discovery of Intervening, Local and Intrinsic Highly Ionized Absorption in an extremely bright high resolution X-ray spectrum of an Extragalactic Source

    NASA Astrophysics Data System (ADS)

    Nicastro, F.; Elvis, M.; Fang, T.; Mathur, S.; Siemiginowska, A.; Zezas, A.

    2003-03-01

    In this contribution we present the brightest high resolution X-ray spectrum ever taken for an extragalactic source. Following our ToO request, Chandra observed the blazar Mkn 421 (z=0.03) during an exceptionally high-luminosity flare. The observation lasted about 100 ks, during which the source reached a flux level of > 0.1 Crab in the 0.5-2 keV band This allowed us to collect 4.2 million counts in the 1st-order ACIS-LETG spectrum of Mkn 421, and more than 3000 counts per resolution elements at the rest frame wavelength of the OVII Kα resonant transitions (21.6 Å). A forest of very weak (EW=3.1-10 mÅ) resonant absorption lines is detected from the rest frame wavelength of the OVII Kα all the way down to the position of the OVII Kα line at the source redshift. We identify these lines as due to: (a) Local Group Warm-Hot Intergalactic Medium (WHIM) absorption, (b) intervening WHIM absorption at redshifts z=0.01 (associated with faint H Lyα absorption) and z=0.025, and (c) intrinsic source absorption. The strongest of these systems is associated with the local WHIM first discovered along the line of sight to PKS 2155-304 (Nicastro et al., 2002, 2003), and now observed (always with consistent gas properties) along all the lines of sight for which Chandra high resolution spectra with sufficient signal to noise ratio are available. The faintest systems (probing OVII column densities as low as 1015 cm-2) are those identified as due to the two intervening WHIM systems. If both these identification are correct this discovery implies a number of intervening OVII WHIM systems per unit redshift of dN/dz(NOVII>1015) = 75, about 3-4 times larger than the corresponding number estimated for OVI systems in the local Universe (down to OVI EW of 60 mÅ). The WHIM baryon fraction implied depends slightly on the ionization correction applied, and ranges between 40 % and 60 % of the total baryons at z<2, so confirming hydrodynamical simulation predictions and accounting for all of

  11. Low-temperature high-resolution absorption spectrum of 14NH3 in the ν1+ν3 band region (1.51 μm)

    NASA Astrophysics Data System (ADS)

    Földes, T.; Golebiowski, D.; Herman, M.; Softley, T. P.; Di Lonardo, G.; Fusina, L.

    2014-09-01

    Jet-cooled spectra of 14NH3 and 15NH3 in natural abundance were recorded using cavity ring-down (CRDS, 6584-6670 cm-1) and cavity enhanced absorption (CEAS, 6530-6700 cm-1) spectroscopy. Line broadening effects in the CRDS spectrum allowed lines with J″-values between 0 and 3 to be identified. Intensity ratios in 14NH3 between the jet-cooled CRDS and literature room-temperature data from Sung et al. (J. Quant. Spectrosc. Radiat. Transfer, 113 (2012), 1066) further assisted the line assignments. Ground state combination differences were extensively used to support the assignments, providing reliable values for J, K and inversion symmetry of the ground state vibrational levels. CEAS data helped in this respect for the lowest J lines, some of which are saturated in the CRDS spectrum. Further information on a/s doublets arose from the observed spectral structures. Thirty-two transitions of 14NH3 were assigned in this way and a limited but significant number (19) of changes in the assignments results, compared to Sung et al. or to Cacciani et al. (J. Quant. Spectrosc. Radiat. Transfer, 113 (2012), 1084). Sixteen known and 25 new low-J transitions were identified for 15NH3 in the CRDS spectrum but the much scarcer literature information did not allow for any more refined assignment. The present line position measurements improve on literature values published for 15NH3 and on some line positions for 14NH3.

  12. The CO2 absorption spectrum in the 2.3 μm transparency window by high sensitivity CRDS: (I) Rovibrational lines

    NASA Astrophysics Data System (ADS)

    Vasilchenko, S.; Konefal, M.; Mondelain, D.; Kassi, S.; Čermák, P.; Tashkun, S. A.; Perevalov, V. I.; Campargue, A.

    2016-11-01

    The absorption of carbon dioxide is very weak near 2.3 μm which makes this transparency window of particular interest for the study of Venus' lower atmosphere. As a consequence of the weakness of the transitions located in this region, previous experimental data are very scarce and spectroscopic databases provide calculated line lists which should be tested and validated by experiment. In this work, we use the Cavity Ring Down Spectroscopy (CRDS) technique for a high sensitivity characterization of the CO2 absorption spectrum in two spectral intervals of the 2.3 μm window: 4248-4257 and 4295-4380 cm-1 which were accessed using a Distributed Feed Back (DFB) diode laser and a Vertical External Cavity Surface Emitting Laser (VECSEL) as light sources, respectively. The achieved sensitivity (noise equivalent absorption, αmin, on the order of 5×10-10 cm-1) allowed detecting numerous new transitions with intensity values down to 5×10-30 cm/molecule. The rovibrational assignments were performed by comparison with available theoretical line lists in particular those obtained at IAO Tomsk using the global effective operator approach. Hot bands of the main isotopologue and 16O12C18O bands were found to be missing in the HITRAN database while they contribute importantly to the absorption in the region. Additional CRDS spectra of a CO2 sample highly enriched in 18O were recorded in order to improve the spectroscopy of this isotopologue. As a result about 700 lines of 16O12C18O, 16O12C17O, 17O12C18O, 12C18O2 and 13C18O2 were newly measured. The status of the different databases (HITRAN, CDSD, variational calculations) in the important 2.3 μm transparency window is discussed. Possible improvements to correct evidenced deficiencies are suggested.

  13. Optical absorption of silicon nanowires

    SciTech Connect

    Xu, T.; Lambert, Y.; Krzeminski, C.; Grandidier, B.; Stievenard, D.; Leveque, G.; Akjouj, A.; Pennec, Y.; Djafari-Rouhani, B.

    2012-08-01

    We report on simulations and measurements of the optical absorption of silicon nanowires (NWs) versus their diameter. We first address the simulation of the optical absorption based on two different theoretical methods: the first one, based on the Green function formalism, is useful to calculate the scattering and absorption properties of a single or a finite set of NWs. The second one, based on the finite difference time domain (FDTD) method, is well-adapted to deal with a periodic set of NWs. In both cases, an increase of the onset energy for the absorption is found with increasing diameter. Such effect is experimentally illustrated, when photoconductivity measurements are performed on single tapered Si nanowires connected between a set of several electrodes. An increase of the nanowire diameter reveals a spectral shift of the photocurrent intensity peak towards lower photon energies that allow to tune the absorption onset from the ultraviolet radiations to the visible light spectrum.

  14. Investigation of the 2-0 pressure-induced vibrational absorption spectrum of hydrogen at temperatures below ambient

    NASA Technical Reports Server (NTRS)

    Silvaggio, P. M.; Goorvitch, D.; Boese, R. W.

    1981-01-01

    A theoretical fit has been made to our laboratory measurements of the 2-0 collisionally induced H2 absorption band for temperatures of 122 and 273.3 K and at a density of 20 amagats. A Lennard-Jones 6-12 intermolecular potential and a Birnbaum-Cohen line profile have been used. The fit resulted in a chi-square of 0.2%. Line widths have also been derived as a function of temperature. The lifetimes of the states have been calculated.

  15. Investigation of the 1-0 pressure-induced vibrational absorption spectrum of hydrogen at temperatures below ambient

    NASA Technical Reports Server (NTRS)

    Goorvitch, D.; Silvaggio, P. M.; Boese, R. W.

    1981-01-01

    A theoretical fit has been made to laboratory measurements of the 1-0 collisionally induced H2 absorption band over a temperature range of 100-273 K and for densities up to 22 amagats. Both the Birnbaum-Cohen and the MacTaggert-Hunt line shape profiles were used. In addition, an intermolecular potential of either a Lennard-Jones 6-12 or a Morse-spline-van der Waals has been used for each line shape. The best fit resulted in a chi-square of 5%. Line widths have also been derived as a function of temperature. The lifetimes of the states were calculated.

  16. Cl2O photochemistry: ultraviolet/vis absorption spectrum temperature dependence and O(3P) quantum yield at 193 and 248 nm.

    PubMed

    Papanastasiou, Dimitrios K; Feierabend, Karl J; Burkholder, James B

    2011-05-28

    The photochemistry of Cl(2)O (dichlorine monoxide) was studied using measurements of its UV/vis absorption spectrum temperature dependence and the O((3)P) atom quantum yield, Φ(Cl(2)O)(O)(λ), in its photolysis at 193 and 248 nm. The Cl(2)O UV/vis absorption spectrum was measured over the temperature range 201-296 K between 200 and 500 nm using diode array spectroscopy. Cl(2)O absorption cross sections, σ(Cl(2)O)(λ,T), at temperatures <296 K were determined relative to its well established room temperature values. A wavelength and temperature dependent parameterization of the Cl(2)O spectrum using the sum of six Gaussian functions, which empirically represent transitions from the ground (1)A(1) electronic state to excited states, is presented. The Gaussian functions are found to correlate well with published theoretically calculated vertical excitation energies. O((3)P) quantum yields in the photolysis of Cl(2)O at 193 and 248 nm were measured using pulsed laser photolysis combined with atomic resonance fluorescence detection of O((3)P) atoms. O((3)P) quantum yields were measured to be 0.85 ± 0.15 for 193 nm photolysis at 296 K and 0.20 ± 0.03 at 248 nm, which was also found to be independent of temperature (220-352 K) and pressure (17 and 28 Torr, N(2)). The quoted uncertainties are at the 2σ (95% confidence) level and include estimated systematic errors. ClO radical temporal profiles obtained following the photolysis of Cl(2)O at 248 nm, as reported previously in Feierabend et al. [J. Phys. Chem. A 114, 12052, (2010)], were interpreted to establish a <5% upper-limit for the O + Cl(2) photodissociation channel, which indicates that O((3)P) is primarily formed in the three-body, O + 2Cl, photodissociation channel at 248 nm. The analysis also indirectly provided a Cl atom quantum yield of 1.2 ± 0.1 at 248 nm. The results from this work are compared with previous studies where possible.

  17. Spectral Similarity Assessment Based on a Spectrum Reflectance-Absorption Index and Simplified Curve Patterns for Hyperspectral Remote Sensing.

    PubMed

    Ma, Dan; Liu, Jun; Huang, Junyi; Li, Huali; Liu, Ping; Chen, Huijuan; Qian, Jing

    2016-01-26

    Hyperspectral images possess properties such as rich spectral information, narrow bandwidth, and large numbers of bands. Finding effective methods to retrieve land features from an image by using similarity assessment indices with specific spectral characteristics is an important research question. This paper reports a novel hyperspectral image similarity assessment index based on spectral curve patterns and a reflection-absorption index. First, some spectral reflection-absorption features are extracted to restrict the subsequent curve simplification. Then, the improved Douglas-Peucker algorithm is employed to simplify all spectral curves without setting the thresholds. Finally, the simplified curves with the feature points are matched, and the similarities among the spectral curves are calculated using the matched points. The Airborne Visible Infrared Imaging Spectrometer (AVIRIS) and Reflective Optics System Imaging Spectrometer (ROSIS) hyperspectral image datasets are then selected to test the effect of the proposed index. The practical experiments indicate that the proposed index can achieve higher precision and fewer points than the traditional spectral information divergence and spectral angle match.

  18. Anomalous band gap behavior in mixed Sn and Pb perovskites enables broadening of absorption spectrum in solar cells.

    PubMed

    Hao, Feng; Stoumpos, Constantinos C; Chang, Robert P H; Kanatzidis, Mercouri G

    2014-06-04

    Perovskite-based solar cells have recently been catapulted to the cutting edge of thin-film photovoltaic research and development because of their promise for high-power conversion efficiencies and ease of fabrication. Two types of generic perovskites compounds have been used in cell fabrication: either Pb- or Sn-based. Here, we describe the performance of perovskite solar cells based on alloyed perovskite solid solutions of methylammonium tin iodide and its lead analogue (CH3NH3Sn(1-x)Pb(x)I3). We exploit the fact that, the energy band gaps of the mixed Pb/Sn compounds do not follow a linear trend (the Vegard's law) in between these two extremes of 1.55 and 1.35 eV, respectively, but have narrower bandgap (<1.3 eV), thus extending the light absorption into the near-infrared (~1,050 nm). A series of solution-processed solid-state photovoltaic devices using a mixture of organic spiro-OMeTAD/lithium bis(trifluoromethylsulfonyl)imide/pyridinium additives as hole transport layer were fabricated and studied as a function of Sn to Pb ratio. Our results show that CH3NH3Sn(0.5)Pb(0.5)I3 has the broadest light absorption and highest short-circuit photocurrent density ~20 mA cm(-2) (obtained under simulated full sunlight of 100 mW cm(-2)).

  19. Spectral Similarity Assessment Based on a Spectrum Reflectance-Absorption Index and Simplified Curve Patterns for Hyperspectral Remote Sensing

    PubMed Central

    Ma, Dan; Liu, Jun; Huang, Junyi; Li, Huali; Liu, Ping; Chen, Huijuan; Qian, Jing

    2016-01-01

    Hyperspectral images possess properties such as rich spectral information, narrow bandwidth, and large numbers of bands. Finding effective methods to retrieve land features from an image by using similarity assessment indices with specific spectral characteristics is an important research question. This paper reports a novel hyperspectral image similarity assessment index based on spectral curve patterns and a reflection-absorption index. First, some spectral reflection-absorption features are extracted to restrict the subsequent curve simplification. Then, the improved Douglas-Peucker algorithm is employed to simplify all spectral curves without setting the thresholds. Finally, the simplified curves with the feature points are matched, and the similarities among the spectral curves are calculated using the matched points. The Airborne Visible Infrared Imaging Spectrometer (AVIRIS) and Reflective Optics System Imaging Spectrometer (ROSIS) hyperspectral image datasets are then selected to test the effect of the proposed index. The practical experiments indicate that the proposed index can achieve higher precision and fewer points than the traditional spectral information divergence and spectral angle match. PMID:26821030

  20. FUSE and STIS Observations of Intervening O VI Absorption Line Systems in the Spectrum of PG 0953+415

    NASA Astrophysics Data System (ADS)

    Savage, B. D.; Sembach, K. R.; Tripp, T. M.; Richter, P.; Jenkins, E. B.

    2000-12-01

    We analyze Far Ultraviolet Spectroscopic Explorer (FUSE) and Space Telescope Imaging Spectrograph (STIS) observations of the intergalactic O VI absorption line systems in the direction of the bright QSO PG 0953+415 (z = 0.239). The FUSE observations cover the wavelength range from 905 to 1187 Å with a velocity resolution of 20 km/s. The STIS observations obtained with the E140M echelle spectrograph extend from 1150 to 1730 Å with a resolution of 8 km/s. These are supplemented with STIS G140M and G230M observations from 1145-1201 Å and from 1724-1814 A with a resolution of 30 km/s. We detect a strong O VI system at z = 0.06807 in the lines of H I Ly alpha, beta, and gamma, O VI 1031.93, 1037.62, N V 1238.80, 1242.80, C IV 1548.20, 1550.77, and C III 977.02 Å. We confirm the detection of the z = 0.14232 O VI system studied previously by Tripp and Savage (2000). The new FUSE observations of this system record Ly beta , O VI 1031.93, 1037.62, and C III 977.02 Å. We derive column densities for the absorption lines detected in both O VI systems using curve of growth and profile fitting techniques. We study the physical conditions in each system and attempt to determine the origin(s) of the ionization. Both detected O VI systems occur at redshifts where there are peaks in the number density of intervening galaxies along the line of sight based on a WIYN redshift survey of galaxies in the one degree field centered on PG 0953+415. We discuss the implications of these observations for the baryonic content of O VI absorption line systems. Financial support has been provided by NASA contract NAS-532985 and STSCI Grants GO 06499.02 and GO 08165.02.

  1. FE K EMISSION AND ABSORPTION FEATURES IN THE XMM-EPIC SPECTRUM OF THE SEYFERT GALAXY IC 4329A

    NASA Technical Reports Server (NTRS)

    Markowitz, A.; Reeves, J. N.; Braito, V.

    2001-01-01

    We present a re-analysis of the XMM-Newton long-look of the X-ray bright Seyfert galaxy IC 4329a. The Fe K bandpass is dominated by two peaks, consistent with emission from neutral or near-neutral Fe Ka and KP. A relativistic diskline model whereby both peaks are the result of one doubly-peaked diskline profile is found to be a poor description of the data. Models using two relativistic disklines are found to describe the emission profile well. A low-inclination, moderately-relativistic dual-diskline model is possible if the contribution from narrow components, due to distant material, is small or absent. A high-inclination, moderately relativistic profile for each peak is possible if there are roughly equal contributions from both the broad and narrow components. Upper limits on Fe XXV and Fe XXVI emission and absorption at the systemic velocity of IC 4329a are obtained. We also present the results of RXTE monitoring of this source obtained so far; the combined XMM-Newton and RXTE data sets allow us to explore the time-resolved spectral behavior of this source on time scales ranging from hours to 2 years. We find no strong evidence for variability of the Fe Ka emission line on any time scale probed, likely due to the minimal level of continuum variability. We detect a narrow absorption line, at a energy of 7.68 keV in the rest frame of the source; its significance has been confirmed using Monte Carlo simulations. This feature is most likely due to absorption from Fe XXVI blueshifted to approximately 0.1c relative to the systemic velocity, making IC 4329a the lowest-redshift AGN known with a high-velocity, highly-ionized outflow component. As is often the case with similar outflows seen in high-luminosity quasars, the estimated mass outflow rate is larger than the inflow accretion rate, signaling that the outflow represents a substantial portion of the total energy budget of the AGN. The outflow could arise from a radiatively-driven disk wind, or it may be in the

  2. Experimental evolution reveals genome-wide spectrum and dynamics of mutations in the rice blast fungus, Magnaporthe oryzae.

    PubMed

    Jeon, Junhyun; Choi, Jaeyoung; Lee, Gir-Won; Dean, Ralph A; Lee, Yong-Hwan

    2013-01-01

    Knowledge on mutation processes is central to interpreting genetic analysis data as well as understanding the underlying nature of almost all evolutionary phenomena. However, studies on genome-wide mutational spectrum and dynamics in fungal pathogens are scarce, hindering our understanding of their evolution and biology. Here, we explored changes in the phenotypes and genome sequences of the rice blast fungus Magnaporthe oryzae during the forced in vitro evolution by weekly transfer of cultures on artificial media. Through combination of experimental evolution with high throughput sequencing technology, we found that mutations accumulate rapidly prior to visible phenotypic changes and that both genetic drift and selection seem to contribute to shaping mutational landscape, suggesting the buffering capacity of fungal genome against mutations. Inference of mutational effects on phenotypes through the use of T-DNA insertion mutants suggested that at least some of the DNA sequence mutations are likely associated with the observed phenotypic changes. Furthermore, our data suggest oxidative damages and UV as major sources of mutation during subcultures. Taken together, our work revealed important properties of original source of variation in the genome of the rice blast fungus. We believe that these results provide not only insights into stability of pathogenicity and genome evolution in plant pathogenic fungi but also a model in which evolution of fungal pathogens in natura can be comparatively investigated.

  3. Thermodynamic consequence of the new attribution of bands in the electronic absorption spectrum of electron donor-iodine-solvent systems

    NASA Astrophysics Data System (ADS)

    Abramov, Sergey P.

    1999-06-01

    The subject review pays attention to the peculiarities in behaviour of bands in the electronic absorption spectra of electron donor-iodine-solvent systems, the appearance of which is associated with the intermolecular interaction of molecular iodine with electron donor organic molecules. The new concept of the bands’ attribution to the isomeric equilibrium molecular charge-transfer complexes (CTCs) of CTC-I and CTC-II types is considered. The features of possible phase transitions in the solid state are discussed on the basis of the thermodynamic properties and electronic structures of the CTC-I and CTC-II in electron donor-iodine-solvent systems. The stabilisation of the CTC-II structure with the temperature lowering coincided in many cases with the electrons’ localisation in the solid state structures having charge-transfer bonds.

  4. An interpretation of the near-ultraviolet absorption spectrum of SO2 - Implications for Venus, Io, and laboratory measurements

    NASA Technical Reports Server (NTRS)

    Belton, M. J. S.

    1982-01-01

    Line characteristics of remotely sensed SO2 spectra near the UV are discussed, noting the implications for the interpretation of data gathered by the IUE of Io and ground-based and Pioneer spectra of Venus. It is shown that the ratio of mean line spacing to linewidth is greater than unity, and that fully resolved lines have features consistent with concepts of temperature and pressure broadening. The application of Beer's approximation for the absorption spectra of Venus and Io atmospheres is found to be incorrect. Further, the spectroscopic limit on the SO2 line data from Io observations by the IUE are interpreted as establishing a lower bound on the SO2 in the Io atmosphere. A greater concentration of SO2 in vapor equilibrium may be present in the lower atmosphere. Laboratory measurements to resolve the uncertainties regarding the UV spectroscopic data from Io and Venus are suggested.

  5. Discovery of a cyclotron absorption line in the spectrum of the binary X-ray pulsar 4U 1538 - 52 observed by Ginga

    NASA Technical Reports Server (NTRS)

    Clark, George W.; Woo, Jonathan W.; Nagase, Fumiaki; Makishima, Kazuo; Sakao, Taro

    1990-01-01

    A cyclotron absorption line near 20 keV has been found in the spectrum of the massive eclipsing binary X-ray pulsar 4U 1538 - 52 in observations with the Ginga observatory. The line is detected throughout the 529 s pulse cycle with a variable equivalent width that has its maximum value during the smaller peak of the two-peak pulse profile. It is found that the profile of the pulse and the phase-dependence of the cyclotron line can be explained qualitatively by a pulsar model based on recent theoretical results on the properties of pencil beams emitted by accretion-heated slabs of magnetized plasma at the magnetic poles of a neutron star. The indicated field at the surface of the neutron star is 1.7 (1 + z) x 10 to the 12th G, where z is the gravitational redshift.

  6. Vacuum-UV absorption spectrum of a laser-produced chromium plasma: 3p-subshell photoabsorption by Cr2+ ions

    NASA Astrophysics Data System (ADS)

    McGuinness, C.; Martins, M.; van Kampen, P.; Hirsch, J.; Kennedy, E. T.; Mosnier, J.-P.; Whitty, W. W.; Costello, J. T.

    2000-11-01

    The dual laser plasma photoabsorption technique has been used to measure the time-resolved vacuum-UV photoabsorption spectrum of a chromium plasma. Resonant photoabsorption cross sections, constructed with the aid of Hartree-Fock calculations, and weighted in accordance with the plasma temperature, have been used to produce the synthetic Cr2+ spectra. The relevant plasma temperature and ionization balance are obtained from simple analytical models for various times during the expansion phase of the plasma plume. The experimental spectra taken at delays of 32, 62 and 90 ns compare well with Cr2+ spectra computed for corresponding predicted temperatures. It is found that in order to produce synthetic spectra that match experiment well, it is necessary to take into account absorption from many states belonging to the Cr2+ ground state configuration 3p63d4, while states from the nearest metastable configuration 3p63p34s make a negligible contribution.

  7. The 5 f r arrow 6 d absorption spectrum of Pa sup 4+ /Cs sub 2 ZrCl sub 6

    SciTech Connect

    Edelstein, N.; Kot, W.K. ); Krupa, J. )

    1992-01-01

    The 5{ital f}{sup 1}{r arrow}6{ital d}{sup 1} absorption spectrum of {sup 231}Pa{sup 4+} diluted in a single crystal of Cs{sub 2}ZrCl{sub 6} has been measured at 4.2 K. Three bands corresponding to the 6{ital d}({Gamma}{sub 8{ital g}}, {Gamma}{sub 7{ital g}}, and {Gamma}{sup {prime}}{sub 8{ital g}} ) levels are assigned. Extensive vibronic structure has been observed for the lowest 5{ital f}{r arrow}6{ital d} transition and this structure is compared to that recently reported for the 6{ital d}{sup 1}{r arrow}5{ital f}{sup 1} emission spectra in the same system.

  8. New narrow infrared absorption features in the spectrum of Io between 3600 and 3100 cm (2.8-3.2 micrometers)

    NASA Technical Reports Server (NTRS)

    Sandford, Scott A.; Geballe, Thomas R.; Salama, Farid; Goorvitch, David

    1994-01-01

    We report the discovery of a series of infrared absorption bands between 3600 and 3100/cm (2.8-3.2 micrometers) in the spectrum of Io. Individual narrow bands are detected at 3553, 3514.5, 3438, 3423, 3411.5, and 3401/cm (2.815, 2.845, 2.909, 2.921, 2.931, and 2.940 micrometers, respectively). The positions and relative strengths of these bands, and the difference of their absolute strengths between the leading and trailing faces of Io, indicate that they are due to SO2. The band at 3438/cm (2.909 micrometers) could potentially have a contribution from an additional molecular species. The existence of these bands in the spectrum of Io indicates that a substantial fraction of the SO2 on Io must reside in transparent ices having relatively large crystal sizes. The decrease in the continuum observed at the high frequency ends of the spectra is probably due to the low frequency side of the recently detected, strong 3590/cm (2.79 micrometer) feature. This band is likely due to the combination of a moderately strong SO2 band and an additional absorption from another molecular species, perhaps H2O isolated in SO2 at low concentrations. A broad (FWHM approximately = 40-60/cm), weak band is seen near 3160/cm (3.16 micrometers) and is consistent with the presence of small quantities of H2O isolated in SO2-rich ices. There is no evidence in the spectra for the presence of H2O vapor on Io. Thus, the spectra presented here neither provide unequivocal evidence for the presence of H2O on Io nor preclude it at the low concentrations suggested by past studies.

  9. A full-dimensional multilayer multiconfiguration time-dependent Hartree study on the ultraviolet absorption spectrum of formaldehyde oxide

    NASA Astrophysics Data System (ADS)

    Meng, Qingyong; Meyer, Hans-Dieter

    2014-09-01

    Employing the multilayer multiconfiguration time-dependent Hartree (ML-MCTDH) method in conjunction with the multistate multimode vibronic coupling Hamiltonian (MMVCH) model, we perform a full dimensional (9D) quantum dynamical study on the simplest Criegee intermediate, formaldehyde oxide, in five lower-lying singlet electronic states. The ultraviolet (UV) spectrum is then simulated by a Fourier transform of the auto-correlation function. The MMVCH model is built based on extensive MRCI(8e,8o)/aug-cc-pVTZ calculations. To ensure a fast convergence of the final calculations, a large number of ML-MCTDH test calculations is performed to find an appropriate multilayer separations (ML-trees) of the ML-MCTDH nuclear wave functions, and the dynamical calculations are carefully checked to ensure that the calculations are well converged. To compare the computational efficiency, standard MCTDH simulations using the same Hamiltonian are also performed. A comparison of the MCTDH and ML-MCTDH calculations shows that even for the present not-too-large system (9D here) the ML-MCTDH calculations can save a considerable amount of computational resources while producing identical spectra as the MCTDH calculations. Furthermore, the present theoretical tilde{B}{}^1A^' }leftarrow tilde{X}{}^1A^' } UV spectral band and the corresponding experimental measurements [J. M. Beames, F. Liu, L. Lu, and M. I. Lester, J. Am. Chem. Soc. 134, 20045-20048 (2012); L. Sheps, J. Phys. Chem. Lett. 4, 4201-4205 (2013); W.-L. Ting, Y.-H. Chen, W. Chao, M. C. Smith, and J. J.-M. Lin, Phys. Chem. Chem. Phys. 16, 10438-10443 (2014)] are discussed. To the best of our knowledge, this is the first theoretical UV spectrum simulated for this molecule including nuclear motion beyond an adiabatic harmonic approximation.

  10. A full-dimensional multilayer multiconfiguration time-dependent Hartree study on the ultraviolet absorption spectrum of formaldehyde oxide

    SciTech Connect

    Meng, Qingyong; Meyer, Hans-Dieter

    2014-09-28

    Employing the multilayer multiconfiguration time-dependent Hartree (ML-MCTDH) method in conjunction with the multistate multimode vibronic coupling Hamiltonian (MMVCH) model, we perform a full dimensional (9D) quantum dynamical study on the simplest Criegee intermediate, formaldehyde oxide, in five lower-lying singlet electronic states. The ultraviolet (UV) spectrum is then simulated by a Fourier transform of the auto-correlation function. The MMVCH model is built based on extensive MRCI(8e,8o)/aug-cc-pVTZ calculations. To ensure a fast convergence of the final calculations, a large number of ML-MCTDH test calculations is performed to find an appropriate multilayer separations (ML-trees) of the ML-MCTDH nuclear wave functions, and the dynamical calculations are carefully checked to ensure that the calculations are well converged. To compare the computational efficiency, standard MCTDH simulations using the same Hamiltonian are also performed. A comparison of the MCTDH and ML-MCTDH calculations shows that even for the present not-too-large system (9D here) the ML-MCTDH calculations can save a considerable amount of computational resources while producing identical spectra as the MCTDH calculations. Furthermore, the present theoretical B{sup ~} {sup 1}A{sup ′}←X{sup ~} {sup 1}A{sup ′} UV spectral band and the corresponding experimental measurements [J. M. Beames, F. Liu, L. Lu, and M. I. Lester, J. Am. Chem. Soc. 134, 20045–20048 (2012); L. Sheps, J. Phys. Chem. Lett. 4, 4201–4205 (2013); W.-L. Ting, Y.-H. Chen, W. Chao, M. C. Smith, and J. J.-M. Lin, Phys. Chem. Chem. Phys. 16, 10438–10443 (2014)] are discussed. To the best of our knowledge, this is the first theoretical UV spectrum simulated for this molecule including nuclear motion beyond an adiabatic harmonic approximation.

  11. An Fe XXIV Absorption Line in the Persistent Spectrum of the Dipping Low-Mass X-Ray Binary 1A 1744-361

    NASA Technical Reports Server (NTRS)

    Gavriil, Fotis P.; Strohmayer, Tod E.; Bhattacharyya, Sudip

    2012-01-01

    We report on Chandra X-ray Observatory (Chandra) High Energy Transmission Grating spectra of the dipping low-mass X-ray binary 1A 1744-361 during its 2008 July outburst. We find that its persistent emission is well modeled by a blackbody (kT approx. 1.0 keV) plus power law (Gamma approx. 1.7) with an absorption edge. In the residuals of the combined spectrum, we find a significant absorption line at 6.961 +/- 0.002 keV, consistent with the Fe xxvi (hydrogen-like Fe) 2-1 transition.We place an upper limit on the velocity of a redshifted flow of nu < 221 km/s. We find an equivalent width for the line of 27+2/-3 eV, from which we determine a column density of (7 +/- 1)×10(exp 17) /sq. cm via a curve-of-growth analysis. Using XSTAR simulations, we place a lower limit on the ionization parameter of >103.6 erg cm/s. We discuss what implications the feature has on the system and its geometry. We also present Rossi X-ray Timing Explorer data accumulated during this latest outburst and, via an updated color-color diagram, clearly show that 1A 1744-361 is an "atoll" source

  12. Probing Lewis Acid-Base Interactions with Born-Oppenheimer Molecular Dynamics: The Electronic Absorption Spectrum of p-Nitroaniline in Supercritical CO2.

    PubMed

    Cabral, Benedito J Costa; Rivelino, Roberto; Coutinho, Kaline; Canuto, Sylvio

    2015-07-02

    The structure and dynamics of p-nitroaniline (PNA) in supercritical CO2 (scCO2) at T = 315 K and ρ = 0.81 g cm(-3) are investigated by carrying out Born-Oppenheimer molecular dynamics, and the electronic absorption spectrum in scCO2 is determined by time dependent density functional theory. The structure of the PNA-scCO2 solution illustrates the role played by Lewis acid-base (LA-LB) interactions. In comparison with isolated PNA, the ν(N-O) symmetric and asymmetric stretching modes of PNA in scCO2 are red-shifted by -17 and -29 cm(-1), respectively. The maximum of the charge transfer (CT) absorption band of PNA in scSCO2 is at 3.9 eV, and the predicted red-shift of the π → π* electronic transition relative to the isolated gas-phase PNA molecule reproduces the experimental value of -0.35 eV. An analysis of the relationship between geometry distortions and excitation energies of PNA in scCO2 shows that the π → π* CT transition is very sensitive to changes of the N-O bond distance, strongly indicating a correlation between vibrational and electronic solvatochromism driven by LA-LB interactions. Despite the importance of LA-LB interactions to explain the solvation of PNA in scCO2, the red-shift of the CT band is mainly determined by electrostatic interactions.

  13. Cavity Ringdown Absorption Spectrum of the T_1(n,π*) ← S_0 Transition of Acrolein: Analysis of the 0^0_0 Band Rotational Contour

    NASA Astrophysics Data System (ADS)

    Hlavacek, Nikolaus C.; McAnally, Michael O.; Drucker, Stephen

    2012-06-01

    Acrolein (propenal, CH_2=CH---CH=O) is the simplest conjugated enal molecule and serves as a prototype for investigating the photochemical properties of larger enals and enones. Acrolein has a coplanar arrangement of heavy atoms in its ground electronic state. Much of the photochemistry is mediated by the T_1(π,π*) state, which has a CH_2--twisted equilibrium structure. In solution, the T_1(π,π*) state is typically accessed via intersystem crossing from an intially prepared planar S_1(n,π*) state. An intermediate in this photophysical transformation is the lowest ^3 (n,π*) state, a planar species with adiabatic excitation energy below S_1 and above T_1(π,π*). The present work focuses on this ^3 (n,π*) intermediate state; it is designated T_1(n,π*) as the lowest-energy triplet state of acrolein having a planar equilibrium structure. The T_1(n,π*) ← S_0 band system, with origin near 412 nm, was first recorded in the 1970s at medium (0.5 cm-1) resolution using a long-path absorption cell. Here we report the cavity ringdown spectrum of the 0^0_0 band, recorded using a pulsed dye laser with 0.1 cm-1 spectral bandwidth. The spectrum was measured under both bulk-gas (room-temperature) and jet-cooled conditions. The band contour in each spectrum was analyzed by using a computer program developed for simulating and fitting the rotational structure of singlet-triplet transitions. The assignment of several resolved sub-band heads in the room-temperature spectrum permitted approximate fitting of the inertial constants for the T_1(n,π*) state. The determined values (cm-1) are A=1.662, B=0.1485, C=0.1363. For the parameters A and (B+C)/2, estimated uncertainties of ± 0.003 cm-1 and ± 0.0004 cm-1, respectively, correspond to a range of values that produce qualitatively satisfactory global agreement with the observed room-temperature contour. The fitted inertial constants were used to simulate the rotational contour of the 0^0_0 band under jet-cooled conditions

  14. A Fourier transform infrared absorption difference spectrum associated with the reduction of A1 in photosystem I: are both phylloquinones involved in electron transfer?

    PubMed

    Hastings, G; Sivakumar, V

    2001-03-27

    Photoaccumulated Fourier transform infrared difference spectra associated with P700(+) and P700(+)A(1)(-) formation have been obtained using purified photosystem I particles from Synechocystis sp. PCC 6803. From these spectra, a difference spectrum associated with phylloquinone reduction (A(1)(-) - A(1)) has been calculated. Infrared absorption changes associated with both the loss of the ground state and formation of the anion radical are observed in the difference spectrum. Fourier transform infrared difference spectra obtained in various spectral regions indicate that two, structurally distinct phylloquinones are photoaccumulated. This could indicate that phylloquinones on both the PsaA and PsaB branches are involved in electron transfer, and that electron transfer is bi-directional in photosystem I. It could also indicate an intrinsic structural heterogeneity in the A(1) binding site of the active branch. Several FTIR difference features taken together indicate that a glutamic acid residue (at position 699 or 702 on PsaA and/or 679 or 682 on PsaB) is perturbed upon A(1) anion formation. It is suggested that the protonation state of the perturbed glutamic acid residue is influenced by hydrogen bonding to a nearby tyrosine residue at position 696/676 on PsaA/PsaB.

  15. Poster 7: Could PAH or HAC explain the Titan's stratosphere absorption around 3.4 µm revealed by solar occultations?

    NASA Astrophysics Data System (ADS)

    Cordier, Daniel; Cours, Thibaud; Rey, Michael; Maltagliati, Luca; Seignovert, Benoit; Biennier, Ludovic

    2016-06-01

    In 2006, during Cassini's 10th flyby of Titan (T10), Bellucci et al. (2009) observed a solar occultation by Titan's atmosphere through the solar port of the Cassini/VIMS instrument. These authors noticed the existence of an unexplained additional absorption superimposed to the CH4 3.3 µm band. Because they were unable to model this absorption with gases, they attributed this intriguing feature to the signature of solid state organic components. Kim et al. (2011) revisited the data collected by Bellucci et al. (2009) and they considered the possible contribution of aerosols formed by hydrocarbon ices. They specifically took into account C2H6, CH4, CH3CN, C5H12 and C6H12 ices. More recently, Maltagliati et al. (2015) analyzed a set of four VIMS solar occultations, corresponding to flybys performed between January 2006 and September 2011 at different latitudes. They confirmed the presence of the 3.3 µm absorption in all occultations and underlined the possible importance of gaseous ethane, which has a strong plateau of absorption lines in that wavelength range.In this work, we show that neither hydrocarbon ices nor molecular C2H6 cannot satisfactorily explain the observed absorption. Our simulations speak in favor of an absorption due to the presence of PAH molecules or HAC in the stratosphere of Titan. PAH have been already considered by Lopes-Puertas et al. (2013) at altitudes larger than ˜900 km and tentatively identified in the stratosphere by Maltagliati et al. (2015); PAH and HAC are good candidates for Titan's aerosols precursors.

  16. The 5f2-->5f16d1 absorption spectrum of Cs2GeF6:U4+ crystals: A quantum chemical and experimental study.

    PubMed

    Ordejón, Belén; Karbowiak, Miroslaw; Seijo, Luis; Barandiarán, Zoila

    2006-08-21

    Single crystals of U(4+)-doped Cs2GeF6 with 1% U4+ concentration have been obtained by the modified Bridgman-Stockbarger method in spite of the large difference in ionic radii between Ge4+ and U4+ in octahedral coordination. Their UV absorption spectrum has been recorded at 7 K, between 190 and 350 nm; it consists of a first broad and intense band peaking at about 38,000 cm(-1) followed by a number of broad bands of lower intensity from 39,000 to 45,000 cm(-1). None of the bands observed shows appreciable fine vibronic structure, so that the energies of experimental electronic origins cannot be deduced and the assignment of the experimental spectrum using empirical methods based on crystal field theory cannot be attempted. Alternatively, the profile of the absorption spectrum has been obtained theoretically using the U-F bond lengths and totally symmetric vibrational frequencies of the ground 5f2 - 1A(1g) and 5f16d(t(2g))1 - iT(1u) excited states, their energy differences, and their corresponding electric dipole transition moments calculated using the relativistic ab initio model potential embedded cluster method. The calculations suggest that the observed bands are associated with the lowest five 5f2 - 1A(1g)-->5f16d(t(2g))1 - iT(1u) (i = 1-5) dipole allowed electronic origins and their vibrational progressions. In particular, the first broad and intense band peaking at about 38,000 cm(-1) can be safely assigned to the 0-0 and 0-1 members of the a(1g) progression of the 5f2 - 1A(1g)-->5f16d(t(2g))1 - 1T(1u) electronic origin. The electronic structure of all the states with main configurational character 5f16d(t(2g))1 has been calculated as well. The results show that the lowest crystal level of this manifold is 5f16d(t(2g))1 - 1E(u) and lies about 6200 cm(-1) above the 5f2 level closest in energy, which amounts to some 11 vibrational quanta. This large energy gap could result in low nonradiative decay and efficient UV emission, which suggest the interest of

  17. Electromagnetic resonance modes on a two-dimensional tandem grating and its application for broadband absorption in the visible spectrum.

    PubMed

    Han, Sunwoo; Lee, Bong Jae

    2016-01-25

    In this work, we numerically investigate the electromagnetic resonances on two-dimensional tandem grating structures. The base of a tandem grating consists of an opaque Au substrate, a SiO(2) spacer, and a Au grating (concave type); that is, a well-known fishnet structure forming Au/SiO(2)/Au stack. A convex-type Au grating (i.e., topmost grating) is then attached on top of the base fishnet structure with or without additional SiO(2) spacer, resulting in two types of tandem grating structures. In order to calculate the spectral reflectance and local magnetic field distribution, the finite-difference time-domain method is employed. When the topmost Au grating is directly added onto the base fishnet structure, the surface plasmon and magnetic polariton in the base structure are branched out due to the geometric asymmetry with respect to the SiO(2) spacer. If additional SiO(2) spacer is added between the topmost Au grating and the base fishnet structure, new magnetic resonance modes appear due to coupling between two vertically aligned Au/SiO(2)/Au stacks. With the understanding of multiple electromagnetic resonance modes on the proposed tandem grating structures, we successfully design a broadband absorber made of Au and SiO(2) in the visible spectrum.

  18. Subcomponents and Connectivity of the Inferior Fronto-Occipital Fasciculus Revealed by Diffusion Spectrum Imaging Fiber Tracking

    PubMed Central

    Wu, Yupeng; Sun, Dandan; Wang, Yong; Wang, Yibao

    2016-01-01

    The definitive structure and functional role of the inferior fronto-occipital fasciculus (IFOF) are still controversial. In this study, we aimed to investigate the connectivity, asymmetry, and segmentation patterns of this bundle. High angular diffusion spectrum imaging (DSI) analysis was performed on 10 healthy adults and a 90-subject DSI template (NTU-90 Atlas). In addition, a new tractography approach based on the anatomic subregions and two regions of interest (ROI) was evaluated for the fiber reconstructions. More widespread anterior-posterior connections than previous “standard” definition of the IFOF were found. This distinct pathway demonstrated a greater inter-subjects connective variability with a maximum of 40% overlap in its central part. The statistical results revealed no asymmetry between the left and right hemispheres and no significant differences existed in distributions of the IFOF according to sex. In addition, five subcomponents within the IFOF were identified according to the frontal areas of originations. As the subcomponents passed through the anterior floor of the external capsule, the fibers radiated to the posterior terminations. The most common connection patterns of the subcomponents were as follows: IFOF-I, from frontal polar cortex to occipital pole, inferior occipital lobe, middle occipital lobe, superior occipital lobe, and pericalcarine; IFOF-II, from orbito-frontal cortex to occipital pole, inferior occipital lobe, middle occipital lobe, superior occipital lobe, and pericalcarine; IFOF-III, from inferior frontal gyrus to inferior occipital lobe, middle occipital lobe, superior occipital lobe, occipital pole, and pericalcarine; IFOF-IV, from middle frontal gyrus to occipital pole, and inferior occipital lobe; IFOF-V, from superior frontal gyrus to occipital pole, inferior occipital lobe, and middle occipital lobe. Our work demonstrates the feasibility of high resolution diffusion tensor tractography with sufficient sensitivity

  19. Revealing electronic structure changes in Chevrel phase cathodes upon Mg insertion using X-ray absorption spectroscopy

    SciTech Connect

    Wan, Liwen F.; Wright, Joshua; Perdue, Brian R.; Fister, Timothy T.; Kim, Soojeong; Apblett, Christopher A.; Prendergast, David

    2016-06-10

    Following previous work predicting the electronic response of the Chevrel phase Mo6S8 upon Mg insertion (Thole et al., Phys. Chem. Chem. Phys., 2015, 17, 22548), we provide the experimental proof, evident in X-ray absorption spectroscopy, to illustrate the charge compensation mechanism of the Chevrel phase compound during Mg insertion and de-insertion processes.

  20. Systematic trend of water vapour absorption in red giant atmospheres revealed by high resolution TEXES 12 μm spectra

    NASA Astrophysics Data System (ADS)

    Ryde, N.; Lambert, J.; Farzone, M.; Richter, M. J.; Josselin, E.; Harper, G. M.; Eriksson, K.; Greathouse, T. K.

    2015-01-01

    Context. The structures of the outer atmospheres of red giants are very complex. Recent interpretations of a range of different observations have led to contradictory views of these regions. It is clear, however, that classical model photospheres are inadequate to describe the nature of the outer atmospheres. The notion of large optically thick molecular spheres around the stars (MOLspheres) has been invoked in order to explain spectro-interferometric observations and low- and high-resolution spectra. On the other hand high-resolution spectra in the mid-IR do not easily fit into this picture because they rule out any large sphere of water vapour in LTE surrounding red giants. Aims: In order to approach a unified scenario for these outer regions of red giants, more empirical evidence from different diagnostics are needed. Our aim here is to investigate high-resolution, mid-IR spectra for a range of red giants, spanning spectral types from early K to mid M. We want to study how the pure rotational lines of water vapour change with effective temperature, and whether we can find common properties that can put new constraints on the modelling of these regions, so that we can gain new insights. Methods: We have recorded mid-IR spectra at 12.2 - 12.4 μm at high spectral resolution of ten well-studied bright red giants, with TEXES mounted on the IRTF on Mauna Kea. These stars span effective temperatures from 3450 K to 4850 K. Results: We find that all red giants in our study cooler than 4300 K, spanning a wide range of effective temperatures (down to 3450 K), show water absorption lines stronger than expected and none are detected in emission, in line with what has been previously observed for a few stars. The strengths of the lines vary smoothly with spectral type. We identify several spectral features in the wavelength region that are undoubtedly formed in the photosphere. From a study of water-line ratios of the stars, we find that the excitation temperatures, in the

  1. High-pressure Evolution of Fe2O3 Electronic Structure Revealed by X-ray Absorption

    SciTech Connect

    S Wang; W Mao; A Sorini; C Chen; T Devereaux; Y Ding; Y Xiao; P Chow; N Hiraoka; et al.

    2011-12-31

    We report the high-pressure measurement of the Fe K edge in hematite (Fe{sub 2}O{sub 3}) by x-ray absorption spectroscopy in partial fluorescence yield geometry. The pressure-induced evolution of the electronic structure as Fe{sub 2}O{sub 3} transforms from a high-spin insulator to a low-spin metal is reflected in the x-ray absorption pre-edge. The crystal-field splitting energy was found to increase monotonically with pressure up to 48 GPa, above which a series of phase transitions occur. Atomic multiplet, cluster diagonalization, and density-functional calculations were performed to simulate the pre-edge absorption spectra, showing good qualitative agreement with the measurements. The mechanism for the pressure-induced electronic phase transitions of Fe{sub 2}O{sub 3} is discussed and it is shown that ligand hybridization significantly reduces the critical high-spin/low-spin transition pressure.

  2. High-Pressure Evolution of Fe2O3 Electronic Structure Revealed by X-ray Absorption

    SciTech Connect

    Kao, Chi-Chang

    2011-08-12

    We report the first high pressure measurement of the Fe K-edge in hematite (Fe{sub 2}O{sub 3}) by X-ray absorption spectroscopy in partial fluorescence yield geometry. The pressure-induced evolution of the electronic structure as Fe{sub 2}O{sub 3} transforms from a high-spin insulator to a low-spin metal is reflected in the x-ray absorption pre-edge. The crystal field splitting energy was found to increase monotonically with pressure up to 48 GPa, above which a series of phase transitions occur. Atomic multiplet, cluster diagonalization, and density-functional calculations were performed to simulate the pre-edge absorption spectra, showing good qualitative agreement with the measurements. The mechanism for the pressure-induced phase transitions of Fe{sub 2}O{sub 3} is discussed and it is shown that ligand hybridization significantly reduces the critical high-spin/low-spin gap pressure.

  3. An Fe XXVI Absorption Line in the Persistent Spectrum of the Dipping Low Mass X-ray Binary 1A 1744-361

    NASA Technical Reports Server (NTRS)

    Gavriil, Fotis P.; Strohmayer, Tod E.; Bhattacharyya, Sudip

    2009-01-01

    We report on Chandra X-ray Observatory (CXO) High-Energy Transmission Grating (HETG) spectra of the dipping Low Mass X-ray Binary (LMXB) 1A 1744-361 during its July 2008 outburst. We find that its persistent emission is well modeled by a blackbody (kT approx. 1.0 keV) plus power-law (Gamma approx. 1.7) with an absorption edge at 7.6 keV. In the residuals of the combined spectrum we find a significant absorption line at 6.961+/-0.002 keV, consistent with the Fe XXVI (hydrogen-like Fe) 2 - 1 transition. We place an upper limit on the velocity of a redshifted flow of v < 221 km/s. We find an equivalent width for the line of 27+2/-3 eV, from which we determine a column density of 7+/-1 x 10(exp 17)/sq cm via a curve-of-growth analysis. Using XSTAR simulations, we place a lower limit on the ionization parameter of > 10(exp 3.6) erg cm/s. The properties of this line are consistent with those observed in other dipping LMXBs. Using Rossi X-ray Timing Explorer (RXTE) data accumulated during this latest outburst we present an updated color-color diagram which clearly shows that IA 1744-361 is an "atoll" source. Finally, using additional dips found in the RXTE and CXO data we provide an updated orbital period estimate of 52+/-5 minutes.

  4. The enhancement of 21.2%-power conversion efficiency in polymer photovoltaic cells by using mixed Au nanoparticles with a wide absorption spectrum of 400 nm-1000 nm

    NASA Astrophysics Data System (ADS)

    Hao, Jing-Yu; Xu, Ying; Zhang, Yu-Pei; Chen, Shu-Fen; Li, Xing-Ao; Wang, Lian-Hui; Huang, Wei

    2015-04-01

    Au nanoparticles (NPs) mixed with a majority of bone-like, rod, and cube shapes and a minority of irregular spheres, which can generate a wide absorption spectrum of 400 nm-1000 nm and three localized surface plasmon resonance peaks, respectively, at 525, 575, and 775 nm, are introduced into the hole extraction layer poly(3,4-ethylenedioxythiophene):poly(4-styrenesulfonate) (PEDOT:PSS) to improve optical-to-electrical conversion performances in polymer photovoltaic cells. With the doping concentration of Au NPs optimized, the cell performance is significantly improved: the short-circuit current density and power conversion efficiency of the poly(3-hexylthiophene): [6,6]-phenyl-C60-butyric acid methyl ester cell are increased by 20.54% and 21.2%, reaching 11.15 mA·cm-2 and 4.23%. The variations of optical, electrical, and morphology with the incorporation of Au NPs in the cells are analyzed in detail, and our results demonstrate that the cell performance improvement can be attributed to a synergistic reaction, including: 1) both the localized surface plasmon resonance- and scattering-induced absorption enhancement of the active layer, 2) Au doping-induced hole transport/extraction ability enhancement, and 3) large interface roughness-induced efficient exciton dissociation and hole collection. Project supported by the National Basic Research Program of China (Grant Nos. 2015CB932202 and 2012CB933301), the National Natural Science Foundation of China (Grant Nos. 61274065, 51173081, 61136003, BZ2010043, 51372119, and 51172110), the Science Fund from the Ministry of Education of China (Grant No. IRT1148), the Specialized Research Fund for the Doctoral Program of Higher Education of China (Grant No. 20113223110005), the Priority Academic Program Development of Jiangsu Provincial Higher Education Institutions (Grant No. YX03001), and the National Synergistic Innovation Center for Advanced Materials and the Synergetic Innovation Center for Organic Electronics and

  5. Local Effects in the X-ray Absorption Spectrum of CaCl2, MgCl2, and NaCl Solutions

    SciTech Connect

    Kulik, H J; Correa Tedesco, A A; Schwegler, E; Prendergast, D; Galli, G

    2010-04-12

    Both first principles molecular dynamics and theoretical X-ray absorption spectroscopy have been used to investigate the aqueous solvation of cations in 0.5 M MgCl{sub 2}, CaCl{sub 2}, and NaCl solutions. We focus here on the species-specific effects that Mg{sup 2+}, Ca{sup 2+}, and Na{sup +}, have on the X-ray absorption spectrum of the respective solutions. For the divalent cations, we find that the hydrogen bonding characteristics of the more rigid magnesium first shell water molecules differ from those in the more flexible solvation shell surrounding calcium. In particular, the first solvation shell water molecules of calcium are accessible to forming acceptor hydrogen bonds, and this results in an enhancement of a post-edge peak near 540 eV. The absence of acceptor hydrogen bonds for magnesium first shell water molecules provides an explanation for the experimental and theoretical observation of a lack of enhancement at the post-main-edge peak. For the sodium monovalent cation we find that the broad tilt angle distribution results in a broadening of post-edge features, despite populations in donor-and-acceptor configurations consistent with calcium. We also present the re-averaged spectra of the MgCl{sub 2}, CaCl{sub 2}, and NaCl solutions and show that trends apparent with increasing concentration (0.5 M, 2.0 M, 4.0 M) are consistent with experiment. Finally, we examine more closely both the effect that cation coordination number has on the hydrogen bonding network and the relative perturbation strength of the cations on lone pair oxygen orbitals.

  6. Demonstrating Absorption Spectra Using Commercially Available Incandescent Light Bulbs

    NASA Astrophysics Data System (ADS)

    Birriel, Jennifer J.

    In introductory astronomy courses, I typically introduce the three types of spectra: continuous, absorption line, and emission line. It is standard practice to use an ordinary incandescent light bulb to demonstrate the production of a continuous spectrum, and gas discharge tubes to demonstrate the production of an emission line spectrum. The concept of an absorption spectrum is more difficult for students to grasp. A variety of commercially available light bulbs can be used to demonstrate absorption spectra. Here I discuss the use of specialty incandescent light bulbs to demonstrate the phenomenon of absorption of the continuous spectrum produced by a hot tungsten filament. The bulbs examined include the GE Reveal bulb, yellow anti-insect lights, colored party bulbs, and an incandescent "black light" bulb. The bulbs can be used in a lecture or laboratory setting.

  7. Polarizable QM/MM Multiconfiguration Self-Consistent Field Approach with State-Specific Corrections: Environment Effects on Cytosine Absorption Spectrum.

    PubMed

    Li, Quansong; Mennucci, Benedetta; Robb, Michael A; Blancafort, Lluís; Curutchet, Carles

    2015-04-14

    We present the formulation and implementation of a polarizable quantum mechanics/molecular mechanics (QM/MM) strategy to describe environment effects in multiconfiguration self-consistent field calculations. The strategy is applied to the calculation of the vertical absorption spectrum of cytosine in water. In our approach, mutual polarization of the solute and the solvent is solved self-consistently at the complete-active-space self-consistent-field (CASSCF) level, and the resulting set of charges and dipoles is used to calculate vertical excitation energies using the complete-active-space second-order perturbative (CASPT2) approach and its multistate (MS-CASPT2) variant. In order to treat multiple excited states, we converge the solvent polarization with respect to the state-averaged density of the solute. In order to obtain the final energies, however, we introduce a state-specific correction, where the solvent polarization is recomputed with the density of each state, and demonstrate that this correction brings the excitation energies closer to the values obtained with state-optimized orbitals. Comparison with PCM and nonpolarizable QM/MM calculations shows the importance of specific solute-solvent interactions and environment polarization in describing experiments. Overall, the calculated excitations for the π → π* states in water show good agreement with the experimental spectrum, whereas the n → π* appear at energies above 6 eV, approximately 1 eV higher than in the gas phase. Beyond solvents, the new method will allow studying the impact of heterogeneous biological environments in multiple excited states, as well as the treatment of multichromophoric systems where charge transfer and exciton states play important roles.

  8. The absorption spectrum of water vapor in the 2.2 μm transparency window: High sensitivity measurements and spectroscopic database

    NASA Astrophysics Data System (ADS)

    Campargue, A.; Mikhailenko, S. N.; Vasilchenko, S.; Reynaud, C.; Béguier, S.; Čermák, P.; Mondelain, D.; Kassi, S.; Romanini, D.

    2017-03-01

    The weak absorption spectrum of water vapor in the important 2.2 μm transparency window is investigated with very high sensitivity. Overall, about 400 absorption lines were measured by Cavity Ring Down Spectroscopy (CRDS) and Optical-Feedback-Cavity Enhanced Laser Spectroscopy (OF-CEAS) in five spectral intervals: 4248.2-4257.3, 4298.4-4302.6, 4336.8.5-4367.5, 4422.4-4441.2 and 4514.6-4533.7 cm-1. The achieved sensitivity of the recordings (noise equivalent absorption, αmin, on the order of 2×10-10 cm-1) allowed detecting transitions with intensity values down to 1×10-28 cm/molecule, more than one order of magnitude better than previous studies by Fourier Transform spectroscopy. The rovibrational assignment was performed on the basis of variational calculations and of previously determined empirical energy values. Most of the newly assigned lines correspond to transitions of the ν1, ν3 and 3ν2 bands of H217O in natural isotopic abundance. Fourteen energy levels of H217O, H218O and HD18O are newly determined. An accurate and complete spectroscopic database is constructed for natural water in the 4190-4550 cm-1 region (2.39-2.20 μm). The list includes about 4500 transitions with intensity greater than 1×10-29 cm/molecule, for the six most abundant isotopologues in natural isotopic abundance. Line positions were obtained by difference of empirical energy values determined from literature data and complemented with the present CRDS results. The list is made mostly complete by including weak transitions not yet detected, with positions calculated from empirical levels and variational intensities. The variational intensities computed by a collaboration between the University College London and the Institute of Applied Physics in Nizhny Novgorod are found to improve significantly previous results by Schwenke and Partridge. Examples of comparison of the constructed line list to CRDS spectra and to simulations based on the HITRAN2012 list illustrate the advantages

  9. The very short-lived ozone depleting substance CHBr3 (bromoform): Revised UV absorption spectrum, atmospheric lifetime and ozone depletion potential

    NASA Astrophysics Data System (ADS)

    Papanastasiou, Dimitrios K.; McKeen, Stuart A.; Burkholder, James B.

    2014-05-01

    more pronounced as wavelength increases and temperature decreases. The source of this discrepancy is further discussed. A parameterization of the CHBr3 UV spectrum for use in atmospheric models is developed and illustrative photolysis rate calculations are presented to highlight the impact of the revised σ(Λ,T) values on its calculated local lifetimes. For instance, CHBr3 atmospheric photolysis rate in the tropical region obtained with the present spectral data was found to be 10-15% lower (longer lifetime) than that obtained using the currently recommended values. Moreover, seasonally dependent ozone depletion potentials (ODPs) for CHBr3 emitted in the Indian sub-continent were calculated using the semi-empirical relationship of Brioude et al. (Brioude et al., Geophys. Res. Lett., 37, L19804, doi: 10.1029/2010GL044856, 2010) to evaluate the impact of the present results on stratospheric ozone. In conclusion, the present study reports improved UV absorption cross section data for the short-lived ozone depleting substance CHBr3, which are a result of high quality measurements and a thorough investigation of possible sources of systematic error. The CHBr3 UV cross section data, from this study, combined with OH kinetic data enables more accurate model predictions of stratospheric bromine loading and its impact on stratospheric ozone.

  10. Communication: Does a single CH{sub 3}CN molecule attached to Ru(bipy){sub 3}{sup 2+} affect its absorption spectrum?

    SciTech Connect

    Stockett, M. H.; Brøndsted Nielsen, S.

    2015-05-07

    Tris(bipyridine)ruthenium(II) (Ru(bipy){sub 3}{sup 2+}) is a prototypical transition metal coordination complex whose photophysical properties have attracted considerable attention. A much debated issue is whether the metal-to-ligand charge transfer (MLCT) transition that accounts for the complex’s beautiful red color is fully delocalized across all three bipyridine ligands or located on just one ligand. Here, we show based on gas-phase action spectroscopy that attachment of a single acetonitrile molecule does not change the absorption spectrum from that of the bare ions, which is indicative of a delocalized state. However, the gas-phase spectra of the bare and one solvent molecule complexes are significantly blueshifted relative to that obtained in bulk acetonitrile, which suggests that in solution the polarizability of many solvent molecules working together can localize the MLCT state. Our data clearly show that more than one solvent molecule is needed to break the symmetry of the MLCT excited state and reproduce its solution-phase characteristics.

  11. Titanium Dioxide/Upconversion Nanoparticles/Cadmium Sulfide Nanofibers Enable Enhanced Full-Spectrum Absorption for Superior Solar Light Driven Photocatalysis.

    PubMed

    Zhang, Fu; Zhang, Chuan-Ling; Wang, Wan-Ni; Cong, Huai-Ping; Qian, Hai-Sheng

    2016-06-22

    In this work, we demonstrate an electrospinning technique to fabricate TiO2 /upconversion nanoparticles (UCNPs)/CdS nanofibers on large scale. In addition, the as-prepared TiO2 nanofibers are incorporated with a high population of UCNPs and CdS nanospheres; this results in Förster resonance energy-transfer configurations of the UCNPs, TiO2 , and CdS nanospheres that are in close proximity. Hence, strong fluorescent emissions for the Tm(3+) ions including the (1) G4 →(3) H6 transition are efficiently transferred to TiO2 and the CdS nanoparticles through an energy-transfer process. The as-prepared TiO2 /UCNPs/CdS nanofibers exhibit full-spectrum solar-energy absorption and enable the efficient degradation of organic dyes by fluorescence resonance energy transfer between the UCNPs and TiO2 (or CdS). The UCNPs/TiO2 /CdS nanofibers may also have enhanced energy-transfer efficiency for wide applications in solar cells, bioimaging, photodynamics, and chemotherapy.

  12. Altered Pre-Reflective Sense of Agency in Autism Spectrum Disorders as Revealed by Reduced Intentional Binding

    ERIC Educational Resources Information Center

    Sperduti, Marco; Pieron, Marie; Leboyer, Marion; Zalla, Tiziana

    2014-01-01

    Autism spectrum disorders (ASDs) are neurodevelopmental conditions that severely affect social interaction, communication and several behavioural and cognitive functions, such as planning and monitoring motor actions. A renewed interest in intrapersonal cognition has recently emerged suggesting a putative dissociation between impaired declarative…

  13. Longitudinal Analyses of Expressive Language Development Reveal Two Distinct Language Profiles among Young Children with Autism Spectrum Disorders

    ERIC Educational Resources Information Center

    Tek, Saime; Mesite, Laura; Fein, Deborah; Naigles, Letitia

    2014-01-01

    Although children with Autism spectrum disorders (ASD) show significant variation in language skills, research on what type(s) of language profiles they demonstrate has been limited. Using growth-curve analyses, we investigated how different groups of young children with ASD show increases in the size of their lexicon, morpho-syntactic production…

  14. Proton Magnetic Resonance Spectroscopy and MRI Reveal No Evidence for Brain Mitochondrial Dysfunction in Children with Autism Spectrum Disorder

    ERIC Educational Resources Information Center

    Corrigan, Neva M.; Shaw, Dennis. W. W.; Richards, Todd L.; Estes, Annette M.; Friedman, Seth D.; Petropoulos, Helen; Artru, Alan A.; Dager, Stephen R.

    2012-01-01

    Brain mitochondrial dysfunction has been proposed as an etiologic factor in autism spectrum disorder (ASD). Proton magnetic resonance spectroscopic imaging ([superscript 1]HMRS) and MRI were used to assess for evidence of brain mitochondrial dysfunction in longitudinal samples of children with ASD or developmental delay (DD), and cross-sectionally…

  15. A look into the invisible: ultraviolet-B sensitivity in an insect (Caliothrips phaseoli) revealed through a behavioural action spectrum.

    PubMed

    Mazza, Carlos A; Izaguirre, Miriam M; Curiale, Javier; Ballaré, Carlos L

    2010-02-07

    Caliothrips phaseoli, a phytophagous insect, detects and responds to solar ultraviolet-B radiation (UV-B; lambda spectrum of thrips responses to light by studying their behavioural reactions to monochromatic irradiation under confinement conditions. Thrips were maximally sensitive to wavelengths between 290 and 330 nm; human-visible wavelengths (lambda >or= 400 nm) failed to elicit any response. All but six ommatidia of the thrips compound eye were highly fluorescent when exposed to UV-A of wavelengths longer than 330 nm. We hypothesized that the fluorescent compound acts as an internal filter, preventing radiation with lambda > 330 nm from reaching the photoreceptor cells. Calculations based on the putative filter transmittance and a visual pigment template of lambda(max) = 360 nm produced a sensitivity spectrum that was strikingly similar to the action spectrum of UV-induced behavioural response. These results suggest that specific UV-B vision in thrips is achieved by a standard UV-A photoreceptor and a sharp cut-off internal filter that blocks longer UV wavelengths in the majority of the ommatidia.

  16. A look into the invisible: ultraviolet-B sensitivity in an insect (Caliothrips phaseoli) revealed through a behavioural action spectrum

    PubMed Central

    Mazza, Carlos A.; Izaguirre, Miriam M.; Curiale, Javier; Ballaré, Carlos L.

    2010-01-01

    Caliothrips phaseoli, a phytophagous insect, detects and responds to solar ultraviolet-B radiation (UV-B; λ ≤ 315 nm) under field conditions. A highly specific mechanism must be present in the thrips visual system in order to detect this narrow band of solar radiation, which is at least 30 times less abundant than the UV-A (315–400 nm), to which many insects are sensitive. We constructed an action spectrum of thrips responses to light by studying their behavioural reactions to monochromatic irradiation under confinement conditions. Thrips were maximally sensitive to wavelengths between 290 and 330 nm; human-visible wavelengths (λ ≥ 400 nm) failed to elicit any response. All but six ommatidia of the thrips compound eye were highly fluorescent when exposed to UV-A of wavelengths longer than 330 nm. We hypothesized that the fluorescent compound acts as an internal filter, preventing radiation with λ > 330 nm from reaching the photoreceptor cells. Calculations based on the putative filter transmittance and a visual pigment template of λmax = 360 nm produced a sensitivity spectrum that was strikingly similar to the action spectrum of UV-induced behavioural response. These results suggest that specific UV-B vision in thrips is achieved by a standard UV-A photoreceptor and a sharp cut-off internal filter that blocks longer UV wavelengths in the majority of the ommatidia. PMID:19846453

  17. Different speciation for bromine in brown and red algae, revealed by in vivo X-ray absorption spectroscopic studies.

    PubMed

    Küpper, Frithjof C; Leblanc, Catherine; Meyer-Klaucke, Wolfram; Potin, Philippe; Feiters, Martin C

    2014-08-01

    Members of various algal lineages are known to be strong producers of atmospherically relevant halogen emissions, that is a consequence of their capability to store and metabolize halogens. This study uses a noninvasive, synchrotron-based technique, X-ray absorption spectroscopy, for addressing in vivo bromine speciation in the brown algae Ectocarpus siliculosus, Ascophyllum nodosum, and Fucus serratus, the red algae Gracilaria dura, G. gracilis, Chondrus crispus, Osmundea pinnatifida, Asparagopsis armata, Polysiphonia elongata, and Corallina officinalis, the diatom Thalassiosira rotula, the dinoflagellate Lingulodinium polyedrum and a natural phytoplankton sample. The results highlight a diversity of fundamentally different bromine storage modes: while most of the stramenopile representatives and the dinoflagellate store mostly bromide, there is evidence for Br incorporated in nonaromatic hydrocarbons in Thalassiosira. Red algae operate various organic bromine stores - including a possible precursor (by the haloform reaction) for bromoform in Asparagopsis and aromatically bound Br in Polysiphonia and Corallina. Large fractions of the bromine in the red algae G. dura and C. crispus and the brown alga F. serratus are present as Br(-) defects in solid KCl, similar to what was reported earlier for Laminaria parts. These results are discussed according to different defensive strategies that are used within algal taxa to cope with biotic or abiotic stresses.

  18. Mechanism of Formation of Copper(II) Chloro Complexes Revealed by Transient Absorption Spectroscopy and DFT/TDDFT Calculations.

    PubMed

    Mereshchenko, Andrey S; Olshin, Pavel K; Karabaeva, Kanykey E; Panov, Maxim S; Wilson, R Marshall; Kochemirovsky, Vladimir A; Skripkin, Mikhail Yu; Tveryanovich, Yury S; Tarnovsky, Alexander N

    2015-07-16

    Copper(II) complexes are extremely labile with typical ligand exchange rate constants on the order of 10(6)-10(9) M(-1) s(-1). As a result, it is often difficult to identify the actual formation mechanism of these complexes. In this work, using UV-vis transient absorption when probing in a broad time range (20 ps to 8 μs) in conjunction with DFT/TDDFT calculations, we studied the dynamics and underlying reaction mechanisms of the formation of extremely labile copper(II) CuCl4(2-) chloro complexes from copper(II) CuCl3(-) trichloro complexes and chloride ions. These two species, produced via photochemical dissociation of CuCl4(2-) upon 420 nm excitation into the ligand-to-metal-charge-transfer electronic state, are found to recombine into parent complexes with bimolecular rate constants of (9.0 ± 0.1) × 10(7) and (5.3 ± 0.4) × 10(8) M(-1) s(-1) in acetonitrile and dichloromethane, respectively. In dichloromethane, recombination occurs via a simple one-step addition. In acetonitrile, where [CuCl3](-) reacts with the solvent to form a [CuCl3CH3CN](-) complex in less than 20 ps, recombination takes place via ligand exchange described by the associative interchange mechanism that involves a [CuCl4CH3CN](2-) intermediate. In both solvents, the recombination reaction is potential energy controlled.

  19. Trends in reactivity of electrodeposited 3d transition metals on gold revealed by operando soft x-ray absorption spectroscopy during water splitting

    NASA Astrophysics Data System (ADS)

    Velasco-Vélez, J. J.; Jones, Travis E.; Pfeifer, Verena; Dong, Chung-Li; Chen, Yu-Xun; Chen, Chieh-Ming; Chen, Hsin-Yu; Lu, Ying-Rui; Chen, Jin-Ming; Schlögl, R.; Knop-Gericke, A.; Chuang, C.-H.

    2017-01-01

    We activated gold electrodes for their use as electrocatalyst for water splitting by electrodepositing Cu, Ni and Co. A combination of operando x-ray absorption spectroscopy and potentiometric control under aqueous conditions revealed the trends in reactivity yielded by these electrodes, which are directly associated with the cross- and overpotentials as well as the occupancy of the 3d orbitals. It was found that under anodic polarization the materials electrodeposited on gold suffer from a lack of stability, while under cathodic polarization they exhibit stable behavior. The observed activity is strongly related to the lack of stability shown by these composites under anodic polarization revealing a dynamic process ruled by corrosion. By operando x-ray absorption, we established that the overall enhancement of the activity for the oxygen evolution reaction is directly attributable to the cross-potential and corrosion process of the electrodeposited materials. It is associated with the high potential deposition, which is the origin of the incipient oxidation-corrosion resistance of the lattice. We conclude that the observed trends in the total current are directly associated with the loss of oxygen in the metal-oxide lattice and the subsequent dissolution of metallic ions in the electrolyte under anodic polarization.

  20. The mutational spectrum in Treacher Collins syndrome reveals a predominance of mutations that create a premature-termination codon

    SciTech Connect

    Edwards, S.J.; Gladwin, A.J.; Dixon, M.J.

    1997-03-01

    Treacher Collins syndrome (TCS) is an autosomal dominant disorder of craniofacial development, the features of which include conductive hearing loss and cleft palate. The TCS locus has been mapped to human chromosome 5q31.3-32 and the mutated gene identified. In the current investigation, 25 previously undescribed mutations, which are spread throughout the gene, are presented. This brings the total reported to date to 35, which represents a detection rate of 60%. Of the mutations that have been reported to date, all but one result in the introduction of a premature-termination codon into the predicted protein, treacle. Moreover, the mutations are largely family specific, although a common 5-bp deletion in exon 24 (seven different families) and a recurrent splicing mutation in intron 3 (two different families) have been identified. This mutational spectrum supports the hypothesis that TCS results from haploin-sufficiency. 49 refs., 4 figs., 3 tabs.

  1. Spectrum of Cytogenomic Abnormalities Revealed by Array Comparative Genomic Hybridization on Products of Conception Culture Failure and Normal Karyotype Samples.

    PubMed

    Zhou, Qinghua; Wu, Shen-Yin; Amato, Katherine; DiAdamo, Autumn; Li, Peining

    2016-03-20

    Approximately 30% of pregnancies after implantation end up in spontaneous abortions, and 50% of them are caused by chromosomal abnormalities. However, the spectrum of genomic copy number variants (CNVs) in products of conception (POC) and the underlying gene-dosage-sensitive mechanisms causing spontaneous abortions remain largely unknown. In this study, array comparative genomic hybridization (aCGH) analysis was performed as a salvage procedure for 128 POC culture failure (POC-CF) samples and as a supplemental procedure for 106 POC normal karyotype (POC-NK) samples. Chromosomal abnormalities were detected in 10% of POC-CF and pathogenic CNVs were detected in 3.9% of POC-CF and 5.7% of POC-NK samples. Compiled results from this study and relevant case series through a literature review demonstrated an abnormality detection rate (ADR) of 35% for chromosomal abnormalities in POC-CF samples, 3.7% for pathogenic CNVs in POC-CF samples, and 4.6% for pathogenic CNVs in POC-NK samples. Ingenuity Pathway Analysis (IPA) was performed on the genes from pathogenic CNVs found in POC samples. The denoted primary gene networks suggested that apoptosis and cell proliferation pathways are involved in miscarriage. In summary, a similar spectrum of cytogenomic abnormalities was observed in POC culture success and POC-CF samples. A threshold effect correlating the number of dosage-sensitive genes in a chromosome with the observed frequency of autosomal trisomy is proposed. A rationalized approach using firstly fluorescence in situ hybridization (FISH) testing with probes of chromosomes X/Y/18, 13/21, and 15/16/22 for common aneuploidies and polyploidies and secondly aCGH for other cytogenomic abnormalities is recommended for POC-CF samples.

  2. Cosmic Electromagnetic Radiation: The sky shine covers an enormous spectrum of frequencies, revealing a cosmic picture in some detail.

    PubMed

    Hafner, E M

    1964-09-18

    Within a few decades astronomy has extended the compass of its observations from the visible spectrum downward to radio waves and upward to the highest energies known to science. The major new accomplishments are in the radio and x-ray bands, and in the associated study of cosmic ray electrons. Synchrotron radiation is known to be a mechanism for radio signals; discrete x-ray sources have been found; the intensity and the charge ratio of galactic electrons are under study. Experimental results at energies above the x-ray region are less firm. The sun surely emits gamma rays at energies of about 1 Mev during flare activity, and instruments in deep space have probably recorded the general galactic glow of similar photons. Upper limits for fluxes have been set at 100 Mev and beyond. To some extent the physical processes which give rise to the extraterrestrial radiation are familiar to workers in the terrestrial laboratory. Synchrotron radiation is an example; the bremsstrahlung of electrons, the production of neutral pions in p-p collisions, and the annihilation of electron and nucleon pairs are others. Some proposed mechanisms are, and perhaps always will be, purely speculative in the sense that they are not directly observable in the laboratory. The inverse Compton effect, possibly one of the sources of a metagalactic sky glow of hard photons, is in this class. There is little chance that spontaneous creation of matter, even if it occurs in nature, can be observed on a terrestrial scale. And the extreme physical conditions proposed for neutron stars are beyond our ability to reproduce. Only through interpretation of astronomical data can we test the validity of these ideas. The many pictures of the universe given by the vast electromagnetic spectrum are essential to the synthesis of our concepts.

  3. Integrative Variation Analysis Reveals that a Complex Genotype May Specify Phenotype in Siblings with Syndromic Autism Spectrum Disorder

    PubMed Central

    Kitajima, João Paulo; Tahira, Ana Carolina; Feio-dos-Santos, Ana Cecília; Fock, Rodrigo Ambrósio; Lisboa, Bianca Cristina Garcia; Simões, Sérgio Nery; Krepischi, Ana C. V.; Rosenberg, Carla; Lourenço, Naila Cristina; Passos-Bueno, Maria Rita; Brentani, Helena

    2017-01-01

    It has been proposed that copy number variations (CNVs) are associated with increased risk of autism spectrum disorder (ASD) and, in conjunction with other genetic changes, contribute to the heterogeneity of ASD phenotypes. Array comparative genomic hybridization (aCGH) and exome sequencing, together with systems genetics and network analyses, are being used as tools for the study of complex disorders of unknown etiology, especially those characterized by significant genetic and phenotypic heterogeneity. Therefore, to characterize the complex genotype-phenotype relationship, we performed aCGH and sequenced the exomes of two affected siblings with ASD symptoms, dysmorphic features, and intellectual disability, searching for de novo CNVs, as well as for de novo and rare inherited point variations—single nucleotide variants (SNVs) or small insertions and deletions (indels)—with probable functional impacts. With aCGH, we identified, in both siblings, a duplication in the 4p16.3 region and a deletion at 8p23.3, inherited by a paternal balanced translocation, t(4, 8) (p16; p23). Exome variant analysis found a total of 316 variants, of which 102 were shared by both siblings, 128 were in the male sibling exome data, and 86 were in the female exome data. Our integrative network analysis showed that the siblings’ shared translocation could explain their similar syndromic phenotype, including overgrowth, macrocephaly, and intellectual disability. However, exome data aggregate genes to those already connected from their translocation, which are important to the robustness of the network and contribute to the understanding of the broader spectrum of psychiatric symptoms. This study shows the importance of using an integrative approach to explore genotype-phenotype variability. PMID:28118382

  4. Simulation théorique du spectre d'absorption UV du carbazole et de quelques molécules analogues. Theoretical simulation of UV absorption spectrum of carbazole and some homocyclic analogues

    NASA Astrophysics Data System (ADS)

    Kabouchi, B.; Kenfack Assongo, C.; Cazeau-Dubroca, C.

    2001-04-01

    The UV absorption spectra structures of carbazole, fluorene and dibenzofurane are studied using the atom monopole-dipole interaction (AMDI) model and atomic dipolar polarisabilities and effective charge given by Fraga. The absorption spectra corresponding to these molecules and their self-associations are presented. The original obtained results are discussed and compared to previous works.

  5. A Revised Method of Presenting Wavenumber-Frequency Power Spectrum Diagrams That Reveals the Asymmetric Nature of Tropical Large-scale Waves

    NASA Technical Reports Server (NTRS)

    Chao, Winston C.; Yang, Bo; Fu, Xiouhua

    2007-01-01

    The popular method of presenting wavenumber-frequency power spectrum diagrams for studying tropical large-scale waves in the literature is shown to give an incomplete presentation of these waves. The so-called "convectively-coupled Kelvin (mixed Rossby-gravity) waves" are presented as existing only in the symmetric (antisymmetric) component of the diagrams. This is obviously not consistent with the published composite/regression studies of "convectively-coupled Kelvin waves," which illustrate the asymmetric nature of these waves. The cause of this inconsistency is revealed in this note and a revised method of presenting the power spectrum diagrams is proposed. When this revised method is used, "convectively-coupled Kelvin waves" do show anti-symmetric components, and "convectively-coupled mixed Rossby-gravity waves (also known as Yanai waves)" do show a hint of symmetric components. These results bolster a published proposal that these waves be called "chimeric Kelvin waves," "chimeric mixed Rossby-gravity waves," etc. This revised method of presenting power spectrum diagrams offers a more rigorous means of comparing the General Circulation Models (GCM) output with observations by calling attention to the capability of GCMs in correctly simulating the asymmetric characteristics of the equatorial waves.

  6. Tycho Brahe's 1572 supernova as a standard type Ia as revealed by its light-echo spectrum.

    PubMed

    Krause, Oliver; Tanaka, Masaomi; Usuda, Tomonori; Hattori, Takashi; Goto, Miwa; Birkmann, Stephan; Nomoto, Ken'ichi

    2008-12-04

    Type Ia supernovae are thermonuclear explosions of white dwarf stars in close binary systems. They play an important role as cosmological distance indicators and have led to the discovery of the accelerated expansion of the Universe. Among the most important unsolved questions about supernovae are how the explosion actually proceeds and whether accretion occurs from a companion or by the merging of two white dwarfs. Tycho Brahe's supernova of 1572 (SN 1572) is thought to be one of the best candidates for a type Ia supernova in the Milky Way. The proximity of the SN 1572 remnant has allowed detailed studies, such as the possible identification of the binary companion, and provides a unique opportunity to test theories of the explosion mechanism and the nature of the progenitor. The determination of the hitherto unknown spectroscopic type of this supernova is crucial in relating these results to the diverse population of type Ia supernovae. Here we report an optical spectrum of Tycho's supernova near maximum brightness, obtained from a scattered-light echo more than four centuries after the direct light from the explosion swept past the Earth. We find that SN 1572 belongs to the majority class of normal type Ia supernovae.

  7. Tycho Brahe's 1572 supernova as a standard typeIa as revealed by its light-echo spectrum

    NASA Astrophysics Data System (ADS)

    Krause, Oliver; Tanaka, Masaomi; Usuda, Tomonori; Hattori, Takashi; Goto, Miwa; Birkmann, Stephan; Nomoto, Ken'ichi

    2008-12-01

    TypeIa supernovae are thermonuclear explosions of white dwarf stars in close binary systems. They play an important role as cosmological distance indicators and have led to the discovery of the accelerated expansion of the Universe. Among the most important unsolved questions about supernovae are how the explosion actually proceeds and whether accretion occurs from a companion or by the merging of two white dwarfs. Tycho Brahe's supernova of 1572 (SN1572) is thought to be one of the best candidates for a typeIa supernova in the Milky Way. The proximity of the SN1572 remnant has allowed detailed studies, such as the possible identification of the binary companion, and provides a unique opportunity to test theories of the explosion mechanism and the nature of the progenitor. The determination of the hitherto unknown spectroscopic type of this supernova is crucial in relating these results to the diverse population of typeIa supernovae. Here we report an optical spectrum of Tycho's supernova near maximum brightness, obtained from a scattered-light echo more than four centuries after the direct light from the explosion swept past the Earth. We find that SN1572 belongs to the majority class of normal typeIa supernovae.

  8. Mg-induced increase of bandgap in Zn1-xMgxO nanorods revealed by x-ray absorption and emission spectroscopy

    SciTech Connect

    Pong, Way-Faung; Chiou, J. W.; Tsai, H. M.; Pao, C. W.; Chien, F. Z.; Pong, W. F.; Chen, C. W.; Tsai, M.-H.; Wu, J. J.; Ko, C. H.; Chiang, H. H.; Lin, H.-J.; Lee, J. F.; Guo, J.-H.

    2008-07-10

    X-ray absorption near-edge structure (XANES) and x-ray emission spectroscopy (XES) measurements were used to investigate the effect of Mg doping in ZnO nanorods. The intensities of the features in the O K-edge XANES spectra of Zn{sub 1-x}Mg{sub x}O nanorods are lower than those of pure ZnO nanorods, suggesting that Mg doping increases the negative effective charge of O ions. XES and XANES spectra of O 2p states indicate that Mg doping raises (lowers) the conduction-band-minimum (valence-band-maximum) and increases the bandgap. The bandgap is found to increase linearly with the Mg content, as revealed by photoluminescence and combined XANES and XES measurements.

  9. Connectivity and tissue microstructural alterations in right and left temporal lobe epilepsy revealed by diffusion spectrum imaging.

    PubMed

    Lemkaddem, Alia; Daducci, Alessandro; Kunz, Nicolas; Lazeyras, François; Seeck, Margitta; Thiran, Jean-Philippe; Vulliémoz, Serge

    2014-01-01

    Focal epilepsy is increasingly recognized as the result of an altered brain network, both on the structural and functional levels and the characterization of these widespread brain alterations is crucial for our understanding of the clinical manifestation of seizure and cognitive deficits as well as for the management of candidates to epilepsy surgery. Tractography based on Diffusion Tensor Imaging allows non-invasive mapping of white matter tracts in vivo. Recently, diffusion spectrum imaging (DSI), based on an increased number of diffusion directions and intensities, has improved the sensitivity of tractography, notably with respect to the problem of fiber crossing and recent developments allow acquisition times compatible with clinical application. We used DSI and parcellation of the gray matter in regions of interest to build whole-brain connectivity matrices describing the mutual connections between cortical and subcortical regions in patients with focal epilepsy and healthy controls. In addition, the high angular and radial resolution of DSI allowed us to evaluate also some of the biophysical compartment models, to better understand the cause of the changes in diffusion anisotropy. Global connectivity, hub architecture and regional connectivity patterns were altered in TLE patients and showed different characteristics in RTLE vs LTLE with stronger abnormalities in RTLE. The microstructural analysis suggested that disturbed axonal density contributed more than fiber orientation to the connectivity changes affecting the temporal lobes whereas fiber orientation changes were more involved in extratemporal lobe changes. Our study provides further structural evidence that RTLE and LTLE are not symmetrical entities and DSI-based imaging could help investigate the microstructural correlate of these imaging abnormalities.

  10. XMM-Newton reveals a Seyfert-like X-ray spectrum in the z = 3.6 QSO B1422+231

    NASA Astrophysics Data System (ADS)

    Dadina, M.; Vignali, C.; Cappi, M.; Lanzuisi, G.; Ponti, G.; De Marco, B.; Chartas, G.; Giustini, M.

    2016-08-01

    Context. Matter flows from the central regions of quasi-stellar objects (QSOs) during their active phases are probably responsible for the properties of the super-massive black holes and those of the bulges of host galaxies. To understand how this mechanism works, we need to characterize the geometry and the physical state of the accreting matter at cosmological redshifts, when QSO activity is at its peak. Aims: We aim to use X-ray data to probe the matter inflow at the very center of a QSO at z = 3.62. While complex absorption, the iron K emission line, reflection hump, and high-energy cutoff are known to be almost ubiquitous in nearby active galactic nuclei (AGN), only a few distant objects are known to exhibit some of them. Methods: The few high-quality spectra of distant QSO were collected by adding sparse pointings of single objects obtained during X-ray monitoring campaigns. This could have introduced spurious spectral features due to source variability and/or microlensing. To avoid such problems, we decided to collect a single-epoch and high-quality X-ray spectrum of a distant AGN. We thus picked up the z = 3.62 QSO B1422+231, whose flux, enhanced by gravitationally lensing, is proven to be among the brightest lensed QSOs in X-rays (F2-10 keV ~ 10-12 erg s-1 cm-2). Results: The X-ray spectrum of B1422+231 is found to be very similar to the one of a typical nearby Seyfert galaxy. Neutral absorption is clearly detected (NH ~ 5 × 1021 cm-2 at the redshift of the source), while a strong absorption edge is measured at E ~ 7.5 keV with an optical depth of τ ~ 0.14. We also find hints of the FeKα line in emission at E ~ 6.4 keV line (EW ≲ 70 eV), and a hump is detected in the E ~ 15 - 20 keV energy band (rest frame) in excess of what is predicted by a simple absorbed power-law. Conclusions: The spectrum can best be modeled with two rather complex models; one assumes ionized and partially covering matter along the line of sight, the other is characterized by a

  11. The immunophenotypic spectrum of primary mediastinal large B-cell lymphoma reveals prognostic biomarkers associated with outcome.

    PubMed

    Bledsoe, Jacob R; Redd, Robert A; Hasserjian, Robert P; Soumerai, Jacob D; Nishino, Ha T; Boyer, Daniel F; Ferry, Judith A; Zukerberg, Lawrence R; Harris, Nancy Lee; Abramson, Jeremy S; Sohani, Aliyah R

    2016-10-01

    Primary mediastinal large B-cell lymphoma (PMBL) is a distinct subtype of diffuse large B-cell lymphoma (DLBCL) that shows overlap with classical Hodgkin lymphoma (CHL) and a favorable prognosis compared to mediastinal gray-zone lymphoma (MGZL). We performed immunohistochemistry on initial diagnostic specimens of 49 cases of uniformly treated PMBL to determine the frequency and clinical significance of expression of antigens commonly seen in CHL and MGZL, along with markers previously shown to be prognostic in DLBCL, not otherwise specified. The median age was 37 years with a female:male ratio of 2.3. After a median follow-up of 78 months, 24% of patients had relapsed or refractory disease and 22% had died; the 5-year PFS was 70%. Variable CD15 expression was seen in 31% of cases, but was not associated with adverse outcome. Hans cell-of-origin, proliferation index, and MYC/BCL2 coexpression were not associated with outcome, while low PDL1 (P = 0.011) and high MUM1 (P = 0.065) staining were each associated with shorter PFS. A biologic risk score (one point each for low PDL1 and high MUM1) stratified patients into three prognostic risk groups for PFS (P = 0.001) and OS (P = 0.032). On separate multivariate models, low PDL1 was independent of R-IPI risk group for PFS (HR 6.0, P = 0.023), as was a biologic risk score of 2 (HR 5.6, P = 0.011). Incorporation of the biologic risk score sub-stratified patients within R-IPI groups for both PFS (P < 0.001) and OS (P < 0.001). In summary, we characterize the immunophenotypic spectrum of PMBL and identify PDL1 and MUM1 as prognostic biomarkers for high-risk disease. Am. J. Hematol. 91:E436-E441, 2016. © 2016 Wiley Periodicals, Inc.

  12. [Using ultraviolet-visible ( UV-Vis) absorption spectrum to estimate the dissolved organic matter (DOM) concentration in water, soils and sediments of typical water-level fluctuation zones of the Three Gorges Reservoir areas].

    PubMed

    Li, Lu-lu; Jiang, Tao; Lu, Song; Yan, Jin-long; Gao, Jie; Wei, Shi-qiang; Wang, Ding-yong; Guo, Nian; Zhao, Zhena

    2014-09-01

    Dissolved organic matter (DOM) is a very important component in terrestrial ecosystem. Chromophoric dissolved organic matter (CDOM) is a significant constituent of DOM, which can be measured by ultraviolet-visible (UV-Vis) absorption spectrum. Thus the relationship between CDOM and DOM was investigated and established by several types of models including single-wavelength model, double-wavelength model, absorption spectrum slope (S value) model and three-wavelength model, based on the UV-Vis absorption coefficients of soil and sediment samples (sampled in July of 2012) and water samples (sampled in November of 2012) respectively. The results suggested that the three-wavelength model was the best for fitting, and the determination coefficients of water, soil and sediment data were 0. 788, 0. 933 and 0. 856, respectively. Meanwhile, the nominal best model was validated with the UV-Vis data of 32 soil samples and 36 water samples randomly collected in 2013, showing the RRMSE and MRE were 16. 5% and 16. 9% respectively for soil DOM samples, 10. 32% and 9. 06% respectively for water DOM samples, which further suggested the prediction accuracy was higher in water DOM samples as compared with that in soil DOM samples.

  13. Vibrational-Torsional Coupling Revealed in the Infrared Spectrum of He-Solvated n-PROPYL Radical

    NASA Astrophysics Data System (ADS)

    Moradi, Christopher P.; Broderick, Bernadette M.; Agarwal, Jay; Schaefer, Henry F., III.; Douberly, Gary E.

    2015-06-01

    The n-propyl and i-propyl radicals were generated in the gas phase via pyrolysis of n-butyl nitrite (CH3(CH2)3ONO) and i-butyl nitrite (CH3CH(CH3)CH2ONO) precursors, respectively. Nascent radicals were promptly solvated by a beam of He nanodroplets, and the infrared spectra of the radicals were recorded in the C-H stretching region. In addition to three vibrations of n-propyl previously measured in an Ar matrix, we observe many unreported bands between 2800 and 3150 wn, which we attribute to propyl radicals. The C-H stretching modes observed above 2960 wn for both radicals are in excellent agreement with anharmonic frequencies computed using VPT2. Between 2800 and 2960 wn, however, the spectra of n-propyl and i-propyl radicals become quite congested and difficult to assign due to the presence of multiple anharmonic resonances. Computations reveal the likely origin of the spectral congestion to be strong coupling between the high frequency C-H stretching modes and a lower frequency torsional motion, which modulates quite substantially a through-space hyperconjugation interaction. Pacansky, et. al., J. Phys. Chem. 1977, 81, 2149.

  14. Broad spectrum respiratory pathogen analysis of throat swabs from military recruits reveals interference between rhinoviruses and adenoviruses.

    PubMed

    Wang, Zheng; Malanoski, Anthony P; Lin, Baochuan; Long, Nina C; Leski, Tomasz A; Blaney, Kate M; Hansen, Christian J; Brown, Jason; Broderick, Michael; Stenger, David A; Tibbetts, Clark; Russell, Kevin L; Metzgar, David

    2010-05-01

    Military recruits experience a high incidence of febrile respiratory illness (FRI), leading to significant morbidity and lost training time. Adenoviruses, group A Streptococcus pyogenes, and influenza virus are implicated in over half of the FRI cases reported at recruit training center clinics, while the etiology of the remaining cases is unclear. In this study, we explore the carriage rates and disease associations of adenovirus, enterovirus, rhinovirus, Streptococcus pneumoniae, Haemophilus influenzae, and Neisseria meningitidis in military recruits using high-density resequencing microarrays. The results showed that rhinoviruses, adenoviruses, S. pneumoniae, H. influenzae, and N. meningitidis were widely distributed in recruits. Of these five agents, only adenovirus showed significant correlation with illness. Among the samples tested, only pathogens associated with FRI, such as adenovirus 4 and enterovirus 68, revealed strong temporal and spatial clustering of specific strains, indicating that they are transmitted primarily within sites. The results showed a strong negative association between adenoviral FRI and the presence of rhinoviruses in recruits, suggesting some form of viral interference.

  15. NuSTAR reveals an intrinsically X-ray weak broad absorption line quasar in the ultraluminous infrared galaxy Markarian 231

    SciTech Connect

    Teng, Stacy H.; Rigby, J. R.; Brandt, W. N.; Luo, B.; Harrison, F. A.; Grefenstette, B. W.; Madsen, K. K.; Alexander, D. M.; Gandhi, P.; Bauer, F. E.; Boggs, S. E.; Craig, W. W.; Christensen, F. E.; Comastri, A.; Fabian, A. C.; Farrah, D.; Fiore, F.; Hailey, C. J.; Hickox, R. C.; Ptak, A. F.; and others

    2014-04-10

    We present high-energy (3-30 keV) NuSTAR observations of the nearest quasar, the ultraluminous infrared galaxy (ULIRG) Markarian 231 (Mrk 231), supplemented with new and simultaneous low-energy (0.5-8 keV) data from Chandra. The source was detected, though at much fainter levels than previously reported, likely due to contamination in the large apertures of previous non-focusing hard X-ray telescopes. The full band (0.5-30 keV) X-ray spectrum suggests the active galactic nucleus (AGN) in Mrk 231 is absorbed by a patchy and Compton-thin (N{sub H}∼1.2{sub −0.3}{sup +0.3}×10{sup 23} cm{sup –2}) column. The intrinsic X-ray luminosity (L {sub 0.5–30} {sub keV} ∼ 1.0 × 10{sup 43} erg s{sup –1}) is extremely weak relative to the bolometric luminosity where the 2-10 keV to bolometric luminosity ratio is ∼0.03% compared to the typical values of 2%-15%. Additionally, Mrk 231 has a low X-ray-to-optical power law slope (α{sub OX} ∼ –1.7). It is a local example of a low-ionization broad absorption line quasar that is intrinsically X-ray weak. The weak ionizing continuum may explain the lack of mid-infrared [O IV], [Ne V], and [Ne VI] fine-structure emission lines which are present in sources with otherwise similar AGN properties. We argue that the intrinsic X-ray weakness may be a result of the super-Eddington accretion occurring in the nucleus of this ULIRG, and may also be naturally related to the powerful wind event seen in Mrk 231, a merger remnant escaping from its dusty cocoon.

  16. The ultraviolet spectrum of the gravitational lens candidate UM 425 = QSO 1120+019: Evidence for broad absorption line (BAL) structure

    NASA Technical Reports Server (NTRS)

    Michelitsianos, A. G.; Oliversen, R. J.

    1995-01-01

    The UV line profile structure of high-ionization resonance lines found with the International Ultraviolet Explorer (IUE) in the brightest of four multiply imaged sources (images-A) in the candidate gravitational lens UM 425 = QSO 1120+019 indicates broad absorption line (BAL) structure. The deep-broad trough associated with the O IV line extends to velocities approiximately -12,000 km/s, and contains disrete features that suggest multicomponent velocity structure. This structure may include contributions from C IV absorption from the early-type galaxy that is believed to lens UM 425. A strong absorption feature in the blue wing of the Lyman-alpha lambda 1216 emission line may be a Lyman alpha absorption system at a Z(sub Ly alpha) = 1.437 +/- 0.003, or it may be formed by the superposition of the broad N V lambda lambda 1238, 1242 absorption trough on the extended blue emission wing of the QSO Lyman-alpha line. We obtained a redshift of Z(sub QSO) = 1.471 +/- 0.003 from Lyman-alpha lambda 1215, consistent with the redshift found by Meylan and Djorgovski in the optical. The Lyman-alpha line appears unusally weak due to the presence of N V lambda 1240 BAL absorption. A Lyman-limit absorption system at lambda 912 was not observed in the QSO rest frame. The detection of BAL structure in the other weaker ground-state resonance lines of N II (l) and S IV (l) was not found, suggesting these lines are formed in a region that is distinct from the BAL component. Detection of BAL structure in the other fainter images in this system with Hubble Space Telescope (HST) instrumentation, similar to structure observed here in image A, could provide evidence that UM 425 is a gravitational lens.

  17. Peculiar high energy cosmic ray stratospheric event reveals a heavy primary origin particle above the knee region of the cosmic ray spectrum

    SciTech Connect

    Kopenkin, V.; Fujimoto, Y.

    2005-01-15

    We wish to put forward an explanation for a peculiar cosmic ray event with energy {sigma}E{sub {gamma}}{>=}2x10{sup 15} eV detected in 1975 by the balloon borne emulsion chamber experiment performed in the stratosphere, at the altitude {>=}30 km above sea level. For almost 30 years the event has been described as unusual, invoking new exotic mechanisms or models. In our opinion there is no need for an extraordinary explanation. Contrary to the widespread belief, the event gives us an example of 'unrecognized standard physics'. At the same time this event revealed a variety of features which are of considerable interest for cosmic rays, nuclear physics, and astrophysics. Here we show that the observed family is most likely to be a result of a heavy nucleus interaction with an air nucleus. In this case a primary particle would originally have been in the energy region above 'the knee' of the cosmic ray spectrum.

  18. Emergency surgery for tubo-ovarian abscess identified extended-spectrum beta-lactamase-producing Escherichia coli: the first case presentation revealing causative bacteria.

    PubMed

    Tokumaru, Teppei; Shima, Yasuo; Okabayashi, Takehiro; Hayashi, Kazutoshi; Yamamoto, Yorito; Ozaki, Kazuhide; Iwata, Jun

    We report herein a 41-year-old female with a tubo-ovarian abscess (TOA), which microbial cultures showed to contain extended-spectrum beta-lactamase (ESBL)-producing E. coli, a causative agent of community-acquired infection. The patient initially presented with acute abdominal pain and back pain. Pelvic computed tomography and transvaginal ultrasonography revealed multiple cystic lesions in the bilateral ovaries that suggested TOA. An emergency laparotomy was therefore performed due to the potential for life-threatening septic shock from the TOA-associated pelvic inflammatory disease. Microbial cultures of postoperative fluid discharge from the placed intra-abdominal catheter, vaginal secretions, urine, blood, and feces detected ESBL-producing E.coli. In summary, we successfully performed emergency surgery for life-threatening septic TOA caused by ESBL-producing E. coli infection.

  19. Goddard high-resolution spectrograph observations of narrow discrete stellar wind absorption features in the ultraviolet spectrum of the O7.5 III star Xi Persei

    NASA Technical Reports Server (NTRS)

    Shore, Steven N.; Altner, Bruce; Bolton, C. T.; Cardelli, Jason A.; Ebbets, Dennis C.

    1993-01-01

    We report the observation of transient narrow absorption components (NACs) in the stellar wind of the O giant Xi Per. Two sets of GHRS observations of the Si IV ultraviolet resonance doublet have been obtained. These features are extremely weak, with column densities of approximately 10 exp 12/sq cm and optical depths of order 0.1. The features are narrow, less than 30 km/s, and seem to occur in groups. If the NACs are due to the 1393 A component, they represent previously undetected low-velocity discrete absorption components at V(rad) below -600 km/s. If they are high-velocity features on the 1402 A doublet component, they may represent the decay phase of the discrete absorption components at the terminal velocity. In either case, they are a new aspect of the NAC phenomenon that could not have been detected with previous ultraviolet spectrographs.

  20. Local electronic states of Fe4N films revealed by x-ray absorption spectroscopy and x-ray magnetic circular dichroism

    NASA Astrophysics Data System (ADS)

    Ito, Keita; Toko, Kaoru; Takeda, Yukiharu; Saitoh, Yuji; Oguchi, Tamio; Suemasu, Takashi; Kimura, Akio

    2015-05-01

    We performed x-ray absorption spectroscopy (XAS) and x-ray magnetic circular dichroism (XMCD) measurements at Fe L2,3 and N K-edges for Fe4N epitaxial films grown by molecular beam epitaxy. In order to clarify the element specific local electronic structure of Fe4N, we compared experimentally obtained XAS and XMCD spectra with those simulated by a combination of a first-principles calculation and Fermi's golden rule. We revealed that the shoulders observed at Fe L2,3-edges in the XAS and XMCD spectra were due to the electric dipole transition from the Fe 2p core-level to the hybridization state generated by σ* anti-bonding between the orbitals of N 2p at the body-centered site and Fe 3d on the face-centered (II) sites. Thus, the observed shoulders were attributed to the local electronic structure of Fe atoms at II sites. As to the N K-edge, the line shape of the obtained spectra was explained by the dipole transition from the N 1s core-level to the hybridization state formed by π* and σ* anti-bondings between the Fe 3d and N 2p orbitals. This hybridization plays an important role in featuring the electronic structures and physical properties of Fe4N.

  1. Local electronic states of Fe{sub 4}N films revealed by x-ray absorption spectroscopy and x-ray magnetic circular dichroism

    SciTech Connect

    Ito, Keita; Toko, Kaoru; Suemasu, Takashi; Takeda, Yukiharu; Saitoh, Yuji; Oguchi, Tamio; Kimura, Akio

    2015-05-21

    We performed x-ray absorption spectroscopy (XAS) and x-ray magnetic circular dichroism (XMCD) measurements at Fe L{sub 2,3} and N K-edges for Fe{sub 4}N epitaxial films grown by molecular beam epitaxy. In order to clarify the element specific local electronic structure of Fe{sub 4}N, we compared experimentally obtained XAS and XMCD spectra with those simulated by a combination of a first-principles calculation and Fermi's golden rule. We revealed that the shoulders observed at Fe L{sub 2,3}-edges in the XAS and XMCD spectra were due to the electric dipole transition from the Fe 2p core-level to the hybridization state generated by σ* anti-bonding between the orbitals of N 2p at the body-centered site and Fe 3d on the face-centered (II) sites. Thus, the observed shoulders were attributed to the local electronic structure of Fe atoms at II sites. As to the N K-edge, the line shape of the obtained spectra was explained by the dipole transition from the N 1s core-level to the hybridization state formed by π* and σ* anti-bondings between the Fe 3d and N 2p orbitals. This hybridization plays an important role in featuring the electronic structures and physical properties of Fe{sub 4}N.

  2. Optical absorption of several nanostructures arrays for silicon solar cells

    NASA Astrophysics Data System (ADS)

    Xu, Zhaopeng; Qiao, Huiling; Huangfu, Huichao; Li, Xiaowei; Guo, Jingwei; Wang, Haiyan

    2015-12-01

    To improve the efficiency and reduce the cost of solar cells, it's important to enhance the light absorption. Within the visible solar spectrum based on optimization simulations by COMSOL Multiphysics, the optical absorption of silicon cylindrical nanowires, nanocones and inverted nanocones was calculated respectively. The results reveal that the average absorption for the nanocones between 400 and 800 nm is 70.2%, which is better than cylindrical nanowires (55.3%), inverted nanocones (42.3%) and bulk silicon (42.2%). In addition, more than 95% of light from 630 to 800 nm is reflected for inverted nanocones, which can be used to enhance infrared reflection in photovoltaic devices.

  3. Electronic structure of an [FeFe] hydrogenase model complex in solution revealed by X-ray absorption spectroscopy using narrow-band emission detection.

    PubMed

    Leidel, Nils; Chernev, Petko; Havelius, Kajsa G V; Schwartz, Lennart; Ott, Sascha; Haumann, Michael

    2012-08-29

    High-resolution X-ray absorption spectroscopy with narrow-band X-ray emission detection, supported by density functional theory calculations (XAES-DFT), was used to study a model complex, ([Fe(2)(μ-adt)(CO)(4)(PMe(3))(2)] (1, adt = S-CH(2)-(NCH(2)Ph)-CH(2)-S), of the [FeFe] hydrogenase active site. For 1 in powder material (1(powder)), in MeCN solution (1'), and in its three protonated states (1H, 1Hy, 1HHy; H denotes protonation at the adt-N and Hy protonation of the Fe-Fe bond to form a bridging metal hydride), relations between the molecular structures and the electronic configurations were determined. EXAFS analysis and DFT geometry optimization suggested prevailing rotational isomers in MeCN, which were similar to the crystal structure or exhibited rotation of the (CO) ligands at Fe1 (1(CO), 1Hy(CO)) and in addition of the phenyl ring (1H(CO,Ph), 1HHy(CO,Ph)), leading to an elongated solvent-exposed Fe-Fe bond. Isomer formation, adt-N protonation, and hydride binding caused spectral changes of core-to-valence (pre-edge of the Fe K-shell absorption) and of valence-to-core (Kß(2,5) emission) electronic transitions, and of Kα RIXS data, which were quantitatively reproduced by DFT. The study reveals (1) the composition of molecular orbitals, for example, with dominant Fe-d character, showing variations in symmetry and apparent oxidation state at the two Fe ions and a drop in MO energies by ~1 eV upon each protonation step, (2) the HOMO-LUMO energy gaps, of ~2.3 eV for 1(powder) and ~2.0 eV for 1', and (3) the splitting between iron d(z(2)) and d(x(2)-y(2)) levels of ~0.5 eV for the nonhydride and ~0.9 eV for the hydride states. Good correlations of reduction potentials to LUMO energies and oxidation potentials to HOMO energies were obtained. Two routes of facilitated bridging hydride binding thereby are suggested, involving ligand rotation at Fe1 for 1Hy(CO) or adt-N protonation for 1HHy(CO,Ph). XAES-DFT thus enables verification of the effects of ligand

  4. Determination of iodine via the spectrum of barium mono-iodide using high-resolution continuum source molecular absorption spectrometry in a graphite furnace

    NASA Astrophysics Data System (ADS)

    Huang, Mao Dong; Becker-Ross, Helmut; Florek, Stefan; Okruss, Michael; Welz, Bernhard; Morés, Silvane

    2009-07-01

    Molecular absorption spectra of the diatomic molecules AlI, GaI, InI, TlI, MgI, CaI, SrI and BaI, generated in a graphite furnace, were studied using a high-resolution echelle spectrometer with the aim of finding a simple, reliable and sensitive analytical method for the determination of iodine. Among them, the barium mono-iodide (BaI) was found to have the strongest absorption bands around 538 nm and 560 nm, each of them consisting of a series of well-resolved rotational lines with half-widths of about 40-50 pm. The strongest BaI line, the band head at 538.308 nm has been evaluated systematically for its analytical use for the determination of iodine. High concentrations of hydrochloric acid (or chloride), hydrofluoric acid (or fluoride), iron, potassium and sodium resulted in significant reduction of the BaI molecular absorption. Apart from this, no other serious spectral or non-spectral interference has been observed. Different chemical forms of iodine, such as iodide, iodate and organically bound iodine produced identical BaI absorption sensitivity. The detection limit for iodine was 600 pg, and the calibration curve was linear up to 250 ng iodine. Two real samples with different chemical forms of iodine were analyzed using the proposed method. One sample was an iodide pill with a specified iodide content of 200 mg, the other one was a thyroid hormone pill with a specified content of 63.5 mg. The results were in good or satisfactory agreement with those of independent methods, the potentiometric titration and the inductively coupled plasma time-of-flight mass spectrometry (ICP-ToF-MS); the deviations were 2% and 8% for the iodide and the thyroid hormone sample, respectively. The relative standard deviation of the analytical results ( n = 3) was below 2%.

  5. The decays of three top contributors to the reactor ve high-energy spectrum, 92Rb, 96gsY, and 142Cs, studied with total absorption spectroscopy

    NASA Astrophysics Data System (ADS)

    Rasco, Bertis; MTAS Collaboration

    2016-09-01

    We report total absorption spectroscopy measurements of 92Rb, 96gsY, and 142Cs β decays, which are the most important contributors to the high energy ve spectral shape in nuclear reactors. The measurements were performed with the NaI(Tl) based Modular Total Absorption Spectrometer (MTAS). MTAS was constructed specifically to measure improved β-decay feeding patterns from neutron-rich nuclei, because it is difficult to measure β-decay feeding intensities with high energy precision γ-ray measurements due to the low efficiency of high precision detectors. Besides the impact to the high energy ve spectral shape in nuclear reactors, there are several other important applications of improved measurements of β-decay feeding patterns by total absorption spectroscopy; improve understanding of elemental abundances in the universe, help with stockpile stewardship, contribute to understanding of underlying nuclear structure, and improve measurements of decay heat. We will demonstrate some of the techniques for analyzing MTAS γ-decay data. This research was also sponsored by the Office of Nuclear Physics, U. S. Department of Energy under Contracts DE-AC05-00OR22725, DE-FG02-96ER40983, DE-FG02-96ER40978, and by the Polish National Science Center under Contract UMO-2013/08/T/ST2/00624.

  6. LED-Based Fourier Transform Spectroscopy: the HD16O Absorption Spectrum in the Range of 11200-12400 cm-1

    NASA Astrophysics Data System (ADS)

    Sinitsa, L. N.; Serdyukov, V. I.; Polovtseva, E. R.; Shcherbakov, A. P.; Voronin, B. A.; Bykov, A. D.

    2016-03-01

    The vibrational—rotational spectrum of the HD16O molecule is studied within the range of 11200-12400 cm-1. The spectrum is recorded by an IFS-125M Fourier spectrometer with a resolution of 0.05 cm-1. The measurements are performed using a multipass White cell. A light-emitting diode is used as a radiation source. The signal-to-noise ratio was about 104. The centers, intensities, and half-widths of the spectral lines are determined by fitting to the experimental data by the least-squares method. A linelist containing more than 1500 lines is created. The results obtained are compared with the experimental data of other authors.

  7. Transcriptional analysis of porcine intestinal mucosa infected with Salmonella Typhimurium revealed a massive inflammatory response and disruption of bile acid absorption in ileum.

    PubMed

    Uribe, Juber Herrera; Collado-Romero, Melania; Zaldívar-López, Sara; Arce, Cristina; Bautista, Rocío; Carvajal, Ana; Cirera, Susanna; Claros, M Gonzalo; Garrido, Juan J

    2016-01-07

    Infected pork meat is an important source of non-typhoidal human salmonellosis. Understanding of molecular mechanisms involved in disease pathogenesis is important for the development of therapeutic and preventive strategies. Thus, hereby we study the transcriptional profiles along the porcine intestine during infection with Salmonella Typhimurium, as well as post-transcriptional gene modulation by microRNAs (miRNA). Sixteen piglets were orally challenged with S. Typhimurium. Samples from jejunum, ileum and colon, collected 1, 2 and 6 days post infection (dpi) were hybridized to mRNA and miRNA expression microarrays and analyzed. Jejunum showed a reduced transcriptional response indicating mild inflammation only at 2 dpi. In ileum inflammatory genes were overexpressed (e.g., IL-1B, IL-6, IL-8, IL1RAP, TNFα), indicating a strong immune response at all times of infection. Infection also down-regulated genes of the FXR pathway (e.g., NR1H4, FABP6, APOA1, SLC10A2), indicating disruption of the bile acid absorption in ileum. This result was confirmed by decreased high-density lipoprotein cholesterol in serum of infected pigs. Ileal inflammatory gene expression changes peaked at 2 dpi and tended to resolve at 6 dpi. Furthermore, miRNA analysis of ileum at 2 dpi revealed 62 miRNAs potentially regulating target genes involved in this inflammatory process (e.g., miR-374 and miR-451). In colon, genes involved in epithelial adherence, proliferation and cellular reorganization were down-regulated at 2 and 6 dpi. In summary, here we show the transcriptional changes occurring at the intestine at different time points of the infection, which are mainly related to inflammation and disruption of the bile acid metabolism.

  8. Lifetime-Broadening-Suppressed X-ray Absorption Spectrum of β-YbAlB4 Deduced from Yb 3d → 2p Resonant X-ray Emission Spectroscopy

    NASA Astrophysics Data System (ADS)

    Kawamura, Naomi; Kanai, Noriko; Hayashi, Hisashi; Matsuda, Yasuhiro H.; Mizumaki, Masaichiro; Kuga, Kentaro; Nakatsuji, Satoru; Watanabe, Shinji

    2017-01-01

    In this work, the Yb 3d → 2p (Yb Lα1,2) resonant X-ray emission spectrum of β-YbAlB4 was acquired using excitation energies around the Yb L3-edge, at 2 K. Subsequently, the lifetime-broadening-suppressed (LBS) X-ray absorption structure (XAS) spectrum was obtained using the SIM-RIXS program. This spectrum was found to exhibit clearly resolved pre-edge and shoulder structures. Resonant Lα1 emission spectra were well reproduced from LBS-XAS profiles over wide ranges of excitation and emission energies. In contrast, noticeable discrepancies appeared between the experimental and simulated Lα2 emission spectra, suggesting an effect resulting from M4M5O1 Coster-Kronig transitions. LBS-XAS, in conjunction with partial fluorescence yield (PFY) XAS and transmission XAS, determined a value for the Yb valence (v) in β-YbAlB4 of 2.76 ± 0.08 at 2 K. Despite this relatively large uncertainty in v, each method provided a consistent variation in valence (δv) as the temperature was raised from 2 to 280 K: 0.060 ± 0.004 (LBS-XAS), 0.061 ± 0.005 (PFY-XAS) and 0.058 ± 0.007 (transmission XAS). The smaller δv associated with LBS-XAS demonstrates the greater precision of this method.

  9. Computational studies of the electronic absorption spectrum of [(2,2';6',2″-terpyridine)-Pt(II)-OH] [7,7,8,8-tetracyanoquinodimethane] complex.

    PubMed

    Rabaâ, Hassan; Taubert, Stefan; Sundholm, Dage

    2013-11-27

    The electronic excitation spectrum of the [(2,2';6',2″-terpyridine)-platinum(II)-OH] [7,7,8,8-tetracyanoquinodimethane] ([Pt(trpy)OH]TCNQ) complex has been studied at the linear-response approximate coupled-cluster singles and doubles (CC2) level using triple-ζ basis sets augmented with polarization functions (TZVP). The calculated ultraviolet-visible (UV-vis) spectrum of the [Pt(trpy)OH]TCNQ complex is compared with the UV-vis spectrum measured for [Pt(tbtrpy)OH]TCNQ (tbtrpy = 4,4',4″-(t)Bu3-2,2';6',2″-terpyridine) in dichloromethane (CH2Cl2) solution. The UV-vis spectrum is also compared with the calculated UV-vis spectra of [Pt(trpy)OH](+) and of the neutral and negatively charged TCNQ species. In contrast to previous interpretations, the CC2 calculations suggest that the [Pt(trpy)OH]TCNQ complex is dissociated into [Pt(trpy)OH](+) and TCNQ(-) when dissolved in CH2Cl2. The computed electronic excitation energies of [Pt(trpy)OH](+) provide information about the charge-transfer excitations between the Pt(II) metal center and the ligands. The UV-vis spectra were also calculated at the linear-response time-dependent density functional theory (TDDFT) level using the B3LYP, BHLYP, and CAM-B3LYP functionals in combination with TZVP quality basis sets. For the TCNQ species, the TDDFT calculations yield slightly smaller excitation energies than obtained at the CC2 level, whereas for [Pt(trpy)OH](+) the CC2 excitation energies are slightly smaller than the TDDFT ones. For the [Pt(trpy)OH]TCNQ complex, the B3LYP calculations yield spurious low-lying excited states rendering the spectral assignment using B3LYP data difficult. The low-energy part of the electronic excitation spectrum for the [Pt(trpy)OH]TCNQ complex calculated at the BHLYP and CAM-B3LYP levels is reminiscent of the CC2 one because the larger amount of Hartree-Fock exchange and the long-range correction of the potential blue shifts the excitation energies.

  10. Experimental and theoretical study of absorption spectrum of the (CH3)2CO···HF complex. Influence of anharmonic interactions on the frequency and intensity of the C=O and H-F stretching bands.

    PubMed

    Bulychev, V P; Svishcheva, E A; Tokhadze, K G

    2014-01-03

    IR absorption spectra of mixtures (CH3)2CO/HF and free (CH3)2CO molecules are recorded in the region of 4000-900 cm(-1) with a Bruker IFS-125 HR vacuum Fourier spectrometer at room temperature with a resolution up to 0.02 cm(-1). Spectral characteristics of the 2ν(C=O) overtone band of free acetone are reliably measured. The ν1(HF) and ν(C=O) absorption bands of the (CH3)2CO···HF complex are obtained by subtracting the absorption bands of free HF and acetone and absorption lines of atmospheric water from the experimental spectrum of mixtures. The experimental data are compared with theoretical results obtained from variational solutions of 1D-4D vibrational Schrödinger equations. The anharmonic potential energy and dipole moment surfaces used in the calculations were computed in the MP2/6-311++G(2d,2p) approximation with corrections for the basis set superposition error. Comparison of the data derived from solutions for different combinations of vibrational degrees of freedom shows that taking the inter-mode anharmonic interactions into account has different effects on the transition frequencies and intensities. Particular attention has been given to elucidation of the influence of anharmonic coupling of the H-F and C=O stretches with the low-frequency intermolecular modes on their frequencies and intensities and the strength of resonance between the fundamental H-F and the first overtone C=O transitions.

  11. Nuclear Magnetic Resonance Solution Structures of Lacticin Q and Aureocin A53 Reveal a Structural Motif Conserved among Leaderless Bacteriocins with Broad-Spectrum Activity.

    PubMed

    Acedo, Jeella Z; van Belkum, Marco J; Lohans, Christopher T; Towle, Kaitlyn M; Miskolzie, Mark; Vederas, John C

    2016-02-02

    Lacticin Q (LnqQ) and aureocin A53 (AucA) are leaderless bacteriocins from Lactococcus lactis QU5 and Staphylococcus aureus A53, respectively. These bacteriocins are characterized by the absence of an N-terminal leader sequence and are active against a broad range of Gram-positive bacteria. LnqQ and AucA consist of 53 and 51 amino acids, respectively, and have 47% identical sequences. In this study, their three-dimensional structures were elucidated using solution nuclear magnetic resonance and were shown to consist of four α-helices that assume a very similar compact, globular overall fold (root-mean-square deviation of 1.7 Å) with a highly cationic surface and a hydrophobic core. The structures of LnqQ and AucA resemble the shorter two-component leaderless bacteriocins, enterocins 7A and 7B, despite having low levels of sequence identity. Homology modeling revealed that the observed structural motif may be shared among leaderless bacteriocins with broad-spectrum activity against Gram-positive organisms. The elucidated structures of LnqQ and AucA also exhibit some resemblance to circular bacteriocins. Despite their similar overall fold, inhibition studies showed that LnqQ and AucA have different antimicrobial potency against the Gram-positive strains tested, suggesting that sequence disparities play a crucial role in their mechanisms of action.

  12. Proteomic Analysis of Post-synaptic Density Fractions from Shank3 Mutant Mice Reveals Brain Region Specific Changes Relevant to Autism Spectrum Disorder

    PubMed Central

    Reim, Dominik; Distler, Ute; Halbedl, Sonja; Verpelli, Chiara; Sala, Carlo; Bockmann, Juergen; Tenzer, Stefan; Boeckers, Tobias M.; Schmeisser, Michael J.

    2017-01-01

    Disruption of the human SHANK3 gene can cause several neuropsychiatric disease entities including Phelan-McDermid syndrome, autism spectrum disorder (ASD), and intellectual disability. Although, a wide array of neurobiological studies strongly supports a major role for SHANK3 in organizing the post-synaptic protein scaffold, the molecular processes at synapses of individuals harboring SHANK3 mutations are still far from being understood. In this study, we biochemically isolated the post-synaptic density (PSD) fraction from striatum and hippocampus of adult Shank3Δ11-/- mutant mice and performed ion-mobility enhanced data-independent label-free LC–MS/MS to obtain the corresponding PSD proteomes (Data are available via ProteomeXchange with identifier PXD005192). This unbiased approach to identify molecular disturbances at Shank3 mutant PSDs revealed hitherto unknown brain region specific alterations including a striatal decrease of several molecules encoded by ASD susceptibility genes such as the serine/threonine kinase Cdkl5 and the potassium channel KCa1.1. Being the first comprehensive analysis of brain region specific PSD proteomes from a Shank3 mutant line, our study provides crucial information on molecular alterations that could foster translational treatment studies for SHANK3 mutation-associated synaptopathies and possibly also ASD in general. PMID:28261056

  13. Comparative study of the absorption spectrum of Li 2CaSiO 4:Cr 4+: First-principles fully relativistic and crystal field calculations

    NASA Astrophysics Data System (ADS)

    Brik, M. G.; Ogasawara, K.

    2007-11-01

    Systematic analysis of the energy level scheme and ground state absorption of the Cr4+ ion in Li2CaSiO4 crystal was performed using the exchange charge model of the crystal field [B.Z. Malkin, in: A.A. Kaplyanskii, B.M. Macfarlane (Eds.), Spectroscopy of Solids Containing Rare-earth Ions, North-Holland, Amsterdam, 1987, pp. 33-50] and recently developed first-principles approach to the analysis of the absorption spectra of impurity ions in crystals based on the discrete variational multielectron (DVME) method [K. Ogasawara, T. Iwata, Y. Koyama, T. Ishii, I. Tanaka, H. Adachi, Phys. Rev. B 64 (2001) 115413]. Using the former method, the values of parameters of crystal field acting on the Cr4+ ion valence electrons were calculated using the Li2CaSiO4 crystal structure data. Energy levels of the Cr4+ ion obtained after diagonalizing the crystal field Hamiltonian are in good agreement with those obtained from the experimental spectra. The latter method is based on the numerical solution of the Dirac equation; therefore, all relativistic effects are automatically considered. As a result, energy level scheme of Cr4+ and its absorption spectra in both polarizations were calculated, assigned and compared with experimental data; energy of the lowest charge transfer transition was evaluated and compared with theoretical predictions for the CrO44- complex available in the literature. The main features of the experimental spectra shape are reproduced well by the calculations. By performing analysis of the molecular orbitals (MO) population, it was shown that the covalent effects play an important role in formation of the spectral properties of Cr4+ ion in the considered crystal.

  14. The Complete Ultraviolet Spectrum of the Archetypal "Wind-dominated" Quasar Mrk 231: Absorption and Emission from a High-speed Dusty Nuclear Outflow

    NASA Astrophysics Data System (ADS)

    Veilleux, S.; Meléndez, M.; Tripp, T. M.; Hamann, F.; Rupke, D. S. N.

    2016-07-01

    New near- and far-ultraviolet (NUV and FUV) Hubble Space Telescope spectra of Mrk 231, the nearest quasar known, are combined with ground-based optical spectra to study the remarkable dichotomy between the FUV and NUV-optical spectral regions in this object. The FUV emission-line features are faint, broad, and highly blueshifted (up to ˜7000 km s-1), with no significant accompanying absorption. In contrast, the profiles of the NUV absorption features resemble those of the optical Na i D, He i, and Ca ii H and K lines, exhibiting broad blueshifted troughs that overlap in velocity space with the FUV emission-line features and indicate a dusty, high-density and patchy broad absorption line (BAL) screen covering ˜90% of the observed continuum source at a distance ≲2-20 pc. The FUV continuum emission does not show the presence of any obvious stellar features and is remarkably flat compared with the steeply declining NUV continuum. The NUV (FUV) features and continuum emission have not varied significantly over the past ˜22 (3) years and are unresolved on scales ˜40 (170) pc. These results favor an active galactic nucleus origin for the NUV-FUV line and continuum emission. The observed FUV line emission is produced in the outflowing BAL cloud system, while the Balmer lines arise primarily from the standard broad line region seen through the dusty BAL screen. Our data are inconsistent with the recently proposed binary black hole model. We argue instead that Mrk 231 is the nearest example of weak-lined “wind-dominated” quasars with high Eddington ratios and geometrically thick (“slim”) accretion disks; these quasars are likely more common in the early universe.

  15. The X-ray absorption spectrum of 4U 1700-37 and its implications for the stellar wind of the companion HD 153919

    NASA Technical Reports Server (NTRS)

    White, N. E.; Kallman, T. R.; Swank, J. H.

    1983-01-01

    The first high resolution non-dispersive 2-60 keV X-ray spectra at 4U1700-37 is presented. The continuum is typical of that found from X-ray pulsars; that is a flat powr law between 2 and 10 keV and, beyond 10 keV, an exponential decay of characteristic energy varying between 10 and 20 keV. No X-ray pulsations were detected between 160 ms and 6 min with an amplitude greater than approximately 2 percent. The absorption measured at binary phases approximately 0.72 is comparable to that expected from the stellar wind of the primary. The gravitational capture of material in the wind is found to be more than enough to power the X-ray source. The increase in the average absorption after phi of approximately 0.5 is confirmed. The minimum level of adsorption is a factor of 2 or 3 lower than that reported by previous observers, which may be related to a factor of approximately 10 decline in the average X-ray luminosity over the same interval. Short term approximately 50 percent variations in adsorption are seen for the first time which appear to be loosely correlated with approximately 10 min flickering activity in the X-ray flux. These most likely originate from inhomogeneities in the stellar wind of the primary. Previously announced in STAR as N83-14034

  16. The X-ray absorption spectrum of 4U1700-37 and its implications for the stellar wind of the companion HD153919

    NASA Technical Reports Server (NTRS)

    White, N. E.; Kallman, T. R.; Swank, J. H.

    1982-01-01

    The first high resolution non-dispersive 2-60 KeV X-ray spectra of 4U1700-37 is presented. The continuum is typical of that found from X-ray pulsars; that is a flat power law between 2 and 10 keV and, beyond 10 keV, an exponential decay of characteristic energy varying between 10 and 20 keV. No X-ray pulsations were detected between 160 ms and 6 min with an amplitude greater than approximately 2%. The absorption measured at binary phases approximately 0.72 is comparable to that expected from the stellar wind of the primary. The gravitational capture of material in the wind is found to be more than enough to power the X-ray source. The increase in the average absorption after phi o approximately 0.5 is confirmed. The minimum level of adsorption is a factor of 2 or 3 lower than that reported by previous observers, which may be related to a factor of approximately 10 decline in the average X-ray luminosity over the same interval. Short term approximately 50% variations in adsorption are seen for the first time which appear to be loosely correlated with approximately 10 min flickering activity in the X-ray flux. These most likely originate from inhomogeneities in the stellar wind of the primary.

  17. Fungal Root Microbiome from Healthy and Brittle Leaf Diseased Date Palm Trees (Phoenix dactylifera L.) Reveals a Hidden Untapped Arsenal of Antibacterial and Broad Spectrum Antifungal Secondary Metabolites.

    PubMed

    Mefteh, Fedia B; Daoud, Amal; Chenari Bouket, Ali; Alenezi, Faizah N; Luptakova, Lenka; Rateb, Mostafa E; Kadri, Adel; Gharsallah, Neji; Belbahri, Lassaad

    2017-01-01

    In this study, we aimed to explore and compare the composition, metabolic diversity and antimicrobial potential of endophytic fungi colonizing internal tissues of healthy and brittle leaf diseased (BLD) date palm trees (Phoenix dactylifera L.) widely cultivated in arid zones of Tunisia. A total of 52 endophytic fungi were isolated from healthy and BLD roots of date palm trees, identified based on internal transcribed spacer-rDNA sequence analysis and shown to represent 13 species belonging to five genera. About 36.8% of isolates were shared between healthy and diseased root fungal microbiomes, whereas 18.4 and 44.7% of isolates were specific to healthy and BLD root fungal microbiomes, respectively. All isolates were able to produce at least two of the screened enzymes including amylase, cellulase, chitinase, pectinase, protease, laccase and lipase. A preliminary screening of the isolates using disk diffusion method for antibacterial activity against four Gram-positive and three Gram-negative bacteria and antifungal activities against three phytopathogenic fungi indicated that healthy and BLD root fungal microbiomes displayed interesting bioactivities against examined bacteria and broad spectrum bioactivity against fungal pathogens. Some of these endophytic fungi (17 isolates) were fermented and their extracts were evaluated for antimicrobial potential against bacterial and fungal isolates. Results revealed that fungal extracts exhibited antibacterial activities and were responsible for approximately half of antifungal activities against living fungi. These results suggest a strong link between fungal bioactivities and their secondary metabolite arsenal. EtOAc extracts of Geotrichum candidum and Thielaviopsis punctulata originating from BLD microbiome gave best results against Micrococcus luteus and Bacillus subtilis with minimum inhibitory concentration (MIC, 0.78 mg/mL) and minimum bactericidal concentration (6.25 mg/mL). G. candidum gave the best result against

  18. Fungal Root Microbiome from Healthy and Brittle Leaf Diseased Date Palm Trees (Phoenix dactylifera L.) Reveals a Hidden Untapped Arsenal of Antibacterial and Broad Spectrum Antifungal Secondary Metabolites

    PubMed Central

    Mefteh, Fedia B.; Daoud, Amal; Chenari Bouket, Ali; Alenezi, Faizah N.; Luptakova, Lenka; Rateb, Mostafa E.; Kadri, Adel; Gharsallah, Neji; Belbahri, Lassaad

    2017-01-01

    In this study, we aimed to explore and compare the composition, metabolic diversity and antimicrobial potential of endophytic fungi colonizing internal tissues of healthy and brittle leaf diseased (BLD) date palm trees (Phoenix dactylifera L.) widely cultivated in arid zones of Tunisia. A total of 52 endophytic fungi were isolated from healthy and BLD roots of date palm trees, identified based on internal transcribed spacer-rDNA sequence analysis and shown to represent 13 species belonging to five genera. About 36.8% of isolates were shared between healthy and diseased root fungal microbiomes, whereas 18.4 and 44.7% of isolates were specific to healthy and BLD root fungal microbiomes, respectively. All isolates were able to produce at least two of the screened enzymes including amylase, cellulase, chitinase, pectinase, protease, laccase and lipase. A preliminary screening of the isolates using disk diffusion method for antibacterial activity against four Gram-positive and three Gram-negative bacteria and antifungal activities against three phytopathogenic fungi indicated that healthy and BLD root fungal microbiomes displayed interesting bioactivities against examined bacteria and broad spectrum bioactivity against fungal pathogens. Some of these endophytic fungi (17 isolates) were fermented and their extracts were evaluated for antimicrobial potential against bacterial and fungal isolates. Results revealed that fungal extracts exhibited antibacterial activities and were responsible for approximately half of antifungal activities against living fungi. These results suggest a strong link between fungal bioactivities and their secondary metabolite arsenal. EtOAc extracts of Geotrichum candidum and Thielaviopsis punctulata originating from BLD microbiome gave best results against Micrococcus luteus and Bacillus subtilis with minimum inhibitory concentration (MIC, 0.78 mg/mL) and minimum bactericidal concentration (6.25 mg/mL). G. candidum gave the best result against

  19. Intensity dependent absorption/transparency of a reducing BaTiO3

    NASA Astrophysics Data System (ADS)

    Chang, J. Y.; Garrett, M. H.; Jenssen, H. P.; Warde, C.

    1993-12-01

    We report intensity dependent absorption and transparency as a function of wavelength for barium titanate. The BaTiO3 crystal examined has an as-grown, light-blue color due to an absorption centered at 690 nm, and when reduced in a partial pressure of 10-15 atm of oxygen it has a yellow-orange color due to an absorption centered at 470 nm. Both energy levels are active in the reduced sample as revealed in the spectrum of the intensity dependent changes in absorption.

  20. Ab initio quantum study of the photodynamics and absorption spectrum for the coupled 1(1)A2 and 1(1)B1 states of SO2.

    PubMed

    Lévêque, Camille; Komainda, Adrian; Taïeb, Richard; Köppel, Horst

    2013-01-28

    The nonadiabatic photoinduced dynamics occurring in the coupled 1(1)A(2) and 1(1)B(1) excited states of SO(2) is investigated using ab initio quantum dynamical methods. To this end, large scale calculations of the potential energy surfaces have been carried out at the multireference configuration interaction level. All vibrational degrees of freedom of the molecule are considered in the potential energy surface calculations and the quantum dynamical treatment. To deal with the symmetry-allowed conical intersection which occurs between the potential energy surfaces, we use the diabatic picture in the framework of regularized diabatic states. Wave-packet propagation on the coupled surfaces was performed and allowed to reproduce with good accuracy the complex absorption band observed experimentally in the 29,000-42,000 cm(-1) range. This provides a basis for a subsequent theoretical treatment of the high order harmonic spectra of SO(2).

  1. [Two-photon excitation fluorescence spectrum of the light-harvesting complex LH2 from Chromatium minutissimum within 650-745 nm range is determined by two-photon absorption of bacteriochlorophyll rather than of carotenoids].

    PubMed

    Krikunova, M A; Leupold, D; Rini, M; Voigt, B; Moskalenko, A A; Toropygina, O A; Razzhivin, A P

    2002-01-01

    Two-photon fluorescence excitation spectra of the peripheral light-harvesting complex LH2 from the purple photosynthetic bacterium Chromatium minutissimum were examined within the expected spectral range of the optically forbidden S1 singlet state of carotenoids. LH2 preparations isolated from wild-type and carotenoid-depleted cells were used. 100-fs laser pulses in the range of 1300-1490 nm with an energy of 7-9 mW (corresponding to one-photon absorption between 650 and 745 nm) were used for two-photon fluorescence excitation. It was shown that two-photon fluorescence excitation spectra of LH2 complex from wild and carotenoid-depleted cells are very similar to each other and to the two-photon fluorescence excitation spectrum of bacteriochlorophyll a in acetone. It was concluded that direct two-photon excitation of bacteriochlorophyll a determines the fluorescence of both samples within the 650-745 nm spectral range.

  2. Influence of the size and protonation state of acidic residue 85 on the absorption spectrum and photoreaction of the bacteriorhodopsin chromophore

    NASA Technical Reports Server (NTRS)

    Lanyi, J. K.; Tittor, J.; Varo, G.; Krippahl, G.; Oesterhelt, D.

    1992-01-01

    The consequences of replacing Asp-85 with glutamate in bacteriorhodopsin, as expressed in Halobacterium sp. GRB, were investigated. Similarly to the in vitro mutated and in Escherichia coli expressed protein, the chromophore was found to exist as a mixture of blue (absorption maximum 615 nm) and red (532 nm) forms, depending on the pH. However, we found two widely separated pKa values (about 5.4 and 10.4 without added salt), arguing for two blue and two red forms in separate equilibria. Both blue and red forms of the protein are in the two-dimensional crystalline state. A single pKa, such as in the E. coli expressed protein, was observed only after solubilization with detergent. The photocycle of the blue forms was determined at pH 4.0 with 610 nm photoexcitation, and that of the red forms at pH 10.5 and with 520 nm photoexcitation, in the time-range of 100 ns to 1 s. The blue forms produced no M, but a K- and an L-like intermediate, whose spectra and kinetics resembled those of blue wild-type bacteriorhodopsin below pH 3. The red forms produced a K-like intermediate, as well as M and N. Only the red forms transported protons. Specific perturbation of the neighborhood of the Schiff base by the replacement of Asp-85 with glutamate was suggested by (1) the shift and splitting of the pKa for what is presumably the protonation of residue 85, (2) a 36 nm blue-shift in the absorption of the all-trans red chromophore and a 25 nm red-shift of the 13-cis N chromophore, as compared to wild-type bacteriorhodopsin and its N intermediate, and (3) significant acceleration of the deprotonation of the Schiff base at pH 7, but not of its reprotonation and the following steps in the photocycle.

  3. Gas-phase energy of the S2←S0 transition and electrostatic properties of the S2 state of carotenoid peridinin via a solvatochromic shift and orientation broadening of the absorption spectrum.

    PubMed

    Pavlovich, Vladimir S

    2014-10-01

    The solvent effect on the position and the shape of the absorption spectrum of peridinin for 12 protic and aprotic solvents as well as the temperature effect for methanol were studied using a solvatochromic theory based on the Onsager sphere cavity model. (Experimental data have been provided by T. Polivka and V. Sundström.) Solvatochromic calculations combined with estimations of orientation broadening of the absorption spectrum by convolution allowed the conclusion that the orientation (dipole-dipole), induction and dispersion solute-solvent interactions reasonably describes the position of the 0-0 frequency. The orientation interactions led to the blue solvatochromic shift, separating them from the induced and dispersion interactions, which produce a red shift. The FWHM of Gaussian of inhomogeneous broadening originated from the fluctuations of orientation interactions was demonstrated to be high (945 cm(-1)) even for such a nonpolar solvent as hexane. The value of |Δμ|/cos φ of -18.7 D has been found (Δμ = μ2 - μg, φ is the angle between Δμ and μg). By assigning peridinin to the idealized C2v point group, the large change of dipole moment |Δμ| of 18.7 D under S2←S0 transition is obtained for peridinin in gas phase. Moreover, the S2-excited state dipole moment μ2 has the opposite orientation relative to that at the ground S0 state μg. The determined gas-phase 0-0 energy of the S2←S0 transition, 22 910 cm(-1) (2.84 eV) is employed to calculate the polarizability change between the S0 and S2 states of 376 Å(3). The finding for the effective Onsager radius is of 9.4 Å. Obtained results for electrostatic properties of the S2 state are compared with those known from Stark spectroscopy and quantum-mechanical calculations.

  4. Far Ultraviolet Spectroscopic Explorer and Space Telescope Imaging Spectrograph Observations of Intervening O VI Absorption Line Systems in the Spectrum of PG 0953+415

    NASA Astrophysics Data System (ADS)

    Savage, B. D.; Sembach, K. R.; Tripp, T. M.; Richter, P.

    2002-01-01

    We present Far Ultraviolet Spectroscopic Explorer (FUSE) and Space Telescope Imaging Spectrograph (STIS) observations of the intergalactic medium toward the bright QSO PG 0953+415 (zem=0.239). The FUSE spectra extend from 905 to 1187 Å and have a resolution of 25 km s-1, while the STIS spectra cover 1150-1730 Å and have a resolution of 7 km s-1. Additional STIS observations at 30 km s-1 are obtained in selected wavelength ranges. An O VI system at z=0.06807 is detected in H I Lyα, Lyβ, Lyγ, O VI λλ1031.93, 1037.62, N V λλ1238.82, 1242.80, C IV λλ1548.20, 1550.77, and C III λ977.02. The observed column densities can be modeled as a low-density intervening gas with a metallicity of 0.4+0.6-0.2 times solar in photoionization equilibrium with the ionizing extragalactic background radiation. The best fit is achieved with an ionization parameter, logU=-1.35, which implies nH~10-5 cm-3 and a path length of ~80 kpc through the absorbing gas. H I Lyα absorption at z=0.14232 spans a velocity range of 410 km s-1 with the strongest components near 0 and 80 km s-1 in the z=0.14232 rest frame. In this system, O VI λλ1031.93, 1037.62 absorption is strong near 0 km s-1 and not detected at 80 km s-1. C III λ977.02 absorption is marginally detected at 80 km s-1 but is not detected at 0 km s-1. The observations place constraints on the properties of the z=0.14232 system but do not discriminate between collisional ionization in hot gas versus photoionization in a very low density medium with an ionization parameter logU>-0.74. The z=0.06807 and 0.14232 O VI systems occur at redshifts where there are peaks in the number density of intervening galaxies along the line of sight determined from WIYN redshift measurements of galaxies in the ~1° field centered on PG 0953+415. We combine our observations of PG 0953+415 with those for other QSOs to update the estimate of the low-redshift number density of intervening O VI systems. Over a total unobscured redshift path of Δz=0

  5. ANOMALOUS DIFFUSE INTERSTELLAR BANDS IN THE SPECTRUM OF HERSCHEL 36. I. OBSERVATIONS OF ROTATIONALLY EXCITED CH AND CH{sup +} ABSORPTION AND STRONG, EXTENDED REDWARD WINGS ON SEVERAL DIBs

    SciTech Connect

    Dahlstrom, Julie; York, Donald G.; Welty, Daniel E.; Oka, Takeshi; Johnson, Sean; Jiang Zihao; Sherman, Reid; Hobbs, L. M.; Friedman, Scott D.; Sonnentrucker, Paule; Rachford, Brian L.; Snow, Theodore P.

    2013-08-10

    Anomalously broad diffuse interstellar bands (DIBs) at 5780.5, 5797.1, 6196.0, and 6613.6 A are found in absorption along the line of sight to Herschel 36, the star illuminating the bright Hourglass region of the H II region Messier 8. Interstellar absorption from excited CH{sup +} in the J = 1 level and from excited CH in the J = 3/2 level is also seen. To our knowledge, neither those excited molecular lines nor such strongly extended DIBs have previously been seen in absorption from interstellar gas. These unusual features appear to arise in a small region near Herschel 36 which contains most of the neutral interstellar material in the sight line. The CH{sup +} and CH in that region are radiatively excited by strong far-IR radiation from the adjacent infrared source Her 36 SE. Similarly, the broadening of the DIBs toward Herschel 36 may be due to radiative pumping of closely spaced high-J rotational levels of relatively small, polar carrier molecules. If this picture of excited rotational states for the DIB carriers is correct and applicable to most DIBs, the 2.7 K cosmic microwave background may set the minimum widths (about 0.35 A) of known DIBs, with molecular processes and/or local radiation fields producing the larger widths found for the broader DIBs. Despite the intense local UV radiation field within the cluster NGC 6530, no previously undetected DIBs stronger than 10 mA in equivalent width are found in the optical spectrum of Herschel 36, suggesting that neither dissociation nor ionization of the carriers of the known DIBs by this intense field creates new carriers with easily detectable DIB-like features. Possibly related profile anomalies for several other DIBs are noted.

  6. A spectrum of an extrasolar planet.

    PubMed

    Richardson, L Jeremy; Deming, Drake; Horning, Karen; Seager, Sara; Harrington, Joseph

    2007-02-22

    Of the over 200 known extrasolar planets, 14 exhibit transits in front of their parent stars as seen from Earth. Spectroscopic observations of the transiting planets can probe the physical conditions of their atmospheres. One such technique can be used to derive the planetary spectrum by subtracting the stellar spectrum measured during eclipse (planet hidden behind star) from the combined-light spectrum measured outside eclipse (star + planet). Although several attempts have been made from Earth-based observatories, no spectrum has yet been measured for any of the established extrasolar planets. Here we report a measurement of the infrared spectrum (7.5-13.2 microm) of the transiting extrasolar planet HD 209458b. Our observations reveal a hot thermal continuum for the planetary spectrum, with an approximately constant ratio to the stellar flux over this wavelength range. Superposed on this continuum is a broad emission peak centred near 9.65 microm that we attribute to emission by silicate clouds. We also find a narrow, unidentified emission feature at 7.78 microm. Models of these 'hot Jupiter' planets predict a flux peak near 10 microm, where thermal emission from the deep atmosphere emerges relatively unimpeded by water absorption, but models dominated by water fit the observed spectrum poorly.

  7. The origin of the unusual Qy red shift in LH1-RC complexes from purple bacteria Thermochromatium tepidum as revealed by Stark absorption spectroscopy.

    PubMed

    Ma, Fei; Yu, Long-Jiang; Wang-Otomo, Zheng-Yu; van Grondelle, Rienk

    2015-12-01

    Native LH1-RC of photosynthetic purple bacteria Thermochromatium (Tch.) tepidum, B915, has an ultra-red BChl a Qy absorption. Two blue-shifted complexes obtained by chemical modification, B893 and B882, have increasing full widths at half maximum (FWHM) and decreasing transition dipole oscillator strength. 77K Stark absorption spectroscopy studies were employed for the three complexes, trying to understand the origin of the 915 nm absorption. We found that Tr(∆α) and |∆μ| of both Qy and carotenoid (Car) bands are larger than for other purple bacterial LH complexes reported previously. Moreover, the red shifts of the Qy bands are associated with (1) increasing Tr(∆α) and |∆μ| of the Qy band, (2) the red shift of the Car Stark signal and (3) the increasing |∆μ| of the Car band. Based on the results and the crystal structure, a combined effect of exciton-charge transfer (CT) states mixing, and inhomogeneous narrowing of the BChl a site energy is proposed to be the origin of the 915 nm absorption. CT-exciton state mixing has long been found to be the origin of strong Stark signal in LH1 and special pair, and the more extent of the mixing in Tch. tepidum LH1 is mainly the consequence of the shorter BChl-BChl distances. The less flexible protein structure results in a smaller site energy disorder (inhomogeneous narrowing), which was demonstrated to be able to influence |∆μ| and absorption.

  8. Enhanced Hydrogen Evolution in the Presence of Plasmonic Au-Photo-Sensitized g-C3N4 with an Extended Absorption Spectrum from 460 to 640 nm.

    PubMed

    Xie, Lihong; Ai, Zhuyu; Zhang, Meng; Sun, Runze; Zhao, Weirong

    2016-01-01

    Extensively spectral-responsive photocatalytic hydrogen production was achieved over g-C3N4 photo-sensitized by Au nanoparticles. The photo-sensitization, which was achieved by a facile photo-assisted reduction route, resulted in an extended spectral range of absorption from 460 to 640 nm. The photo-sensitized g-C3N4 (Au/g-C3N4) photocatalysts exhibit significantly enhanced photocatalytic hydrogen evolution with a TOF value of 223 μmol g-1 h-1, which is a 130-fold improvement over g-C3N4. The hydrogen production result confirms that Au nanoparticles are effective photo-sensitizers for the visible light-responsive substrate g-C3N4. UV-vis diffuse reflection spectra (DRS), photoluminescence spectra (PL), electron spin resonance (ESR), and electrochemical measurements were used to investigate the transfer process of photogenerated electrons. The optimal Au/g-C3N4 photocatalyst displays the lowest charge transfer resistance of 18.45 Ω cm-2 and a high electron transfer efficiency, as determined by electrochemical impedance spectroscopy (EIS). The photo-sensitized g-C3N4 shows a broad range of response to visible light (400-640 nm), with significantly high incident photon-to-current efficiency (IPCE) values of 14.52%, 2.9%, and 0.74% under monochromatic light irradiation of 400, 550, and 640 nm, respectively. ESR characterization suggests that Au nanoparticles are able to absorb visible light of wavelengths higher than 460 nm and to generate hot electrons due to the SPR effect.

  9. Enhanced Hydrogen Evolution in the Presence of Plasmonic Au-Photo-Sensitized g-C3N4 with an Extended Absorption Spectrum from 460 to 640 nm

    PubMed Central

    Xie, Lihong; Ai, Zhuyu; Zhang, Meng; Sun, Runze; Zhao, Weirong

    2016-01-01

    Extensively spectral-responsive photocatalytic hydrogen production was achieved over g-C3N4 photo-sensitized by Au nanoparticles. The photo-sensitization, which was achieved by a facile photo-assisted reduction route, resulted in an extended spectral range of absorption from 460 to 640 nm. The photo-sensitized g-C3N4 (Au/g-C3N4) photocatalysts exhibit significantly enhanced photocatalytic hydrogen evolution with a TOF value of 223 μmol g-1 h-1, which is a 130-fold improvement over g-C3N4. The hydrogen production result confirms that Au nanoparticles are effective photo-sensitizers for the visible light-responsive substrate g-C3N4. UV–vis diffuse reflection spectra (DRS), photoluminescence spectra (PL), electron spin resonance (ESR), and electrochemical measurements were used to investigate the transfer process of photogenerated electrons. The optimal Au/g-C3N4 photocatalyst displays the lowest charge transfer resistance of 18.45 Ω cm-2 and a high electron transfer efficiency, as determined by electrochemical impedance spectroscopy (EIS). The photo-sensitized g-C3N4 shows a broad range of response to visible light (400–640 nm), with significantly high incident photon-to-current efficiency (IPCE) values of 14.52%, 2.9%, and 0.74% under monochromatic light irradiation of 400, 550, and 640 nm, respectively. ESR characterization suggests that Au nanoparticles are able to absorb visible light of wavelengths higher than 460 nm and to generate hot electrons due to the SPR effect. PMID:27575246

  10. [PHOSPHOLIPIDS AND FATTY ACIDS IN ERYTHROCYTES OF THE LAMPREY LAMPETRA FLUVIATILIS DURING AUTUMN PRESPAWNING PERIOD AND THE ABSORPTION SPECTRUM OF THEIR LIPID EXTRACT].

    PubMed

    Zabelinskii, S A; Chebotareva, M A; Shukolyukova, E P; Krivchenko, A I

    2015-01-01

    The content of some classes of phospholipids and their fatty acid composition in erythrocytes of the lamprey Lampetrafluviatilis during the autumn period of its prespawning migration are investigated. It is found that the phospholipid spectrum of erythrocytes of the lamprey, the oldest representative of vertebrates, is similar to that of many mammals. A four-fold prevalence of phosphatidilcholine content over sphingomyelin content as well as prevalence of (ω3-acids over ω6-acids indicates the of lamprey's erythrocyte membranes - an important indicator of deformational ability of lamprey's erythrocytes. Phosphatidilethanol amine and its plasmalogenic form are the most unsaturated phospholipids (their unsaturation indices are 230 and 342, correspondingly). Phosphatidilcholine is the most saturated one (UI is 167). It is found that the basic acid indicators characterizing the fluidity of erythrocyte membranes remain unchanged during the whole period of prespawning migration of lampreys up to spawning. The blood contains several buffer systems, in particular, membrane phospholipids which neutralize acids and alkali incoming into the blood. In the process of organism life a change of pH inside erythrocytes occurs. One can suppose that the base of the system associated with buffer properties of the blood is water dissociation. Inside thin vessels of the circulatory system the hemoglobin attaches and returns molecules of oxygen due to interaction of the buffer systems with water. The property of water to dissociate as well as ion transfer produce in erythrocytes, lying within narrow vessels of the circulatory system, a local pH alteration allowing displacing/attaching the molecule of oxygen from hemoglobin.

  11. Microwave-assisted synthesis of water-soluble, fluorescent gold nanoclusters capped with small organic molecules and a revealing fluorescence and X-ray absorption study

    NASA Astrophysics Data System (ADS)

    Helmbrecht, C.; Lützenkirchen-Hecht, D.; Frank, W.

    2015-03-01

    Colourless solutions of blue light-emitting, water-soluble gold nanoclusters (AuNC) were synthesized from gold colloids under microwave irradiation using small organic molecules as ligands. Stabilized by 1,3,5-triaza-7-phosphaadamantane (TPA) or l-glutamine (GLU), fluorescence quantum yields up to 5% were obtained. AuNC are considered to be very promising for biological labelling, optoelectronic devices and light-emitting materials but the structure-property relationships have still not been fully clarified. To expand the knowledge about the AuNC apart from their fluorescent properties they were studied by X-ray absorption spectroscopy elucidating the oxidation state of the nanoclusters' gold atoms. Based on curve fitting of the XANES spectra in comparison to several gold references, optically transparent fluorescent AuNC are predicted to be ligand-stabilized Au5+ species. Additionally, their near edge structure compared with analogous results of polynuclear clusters known from the literature discloses an increasing intensity of the feature close to the absorption edge with decreasing cluster size. As a result, a linear relationship between the cluster size and the X-ray absorption coefficient can be established for the first time.Colourless solutions of blue light-emitting, water-soluble gold nanoclusters (AuNC) were synthesized from gold colloids under microwave irradiation using small organic molecules as ligands. Stabilized by 1,3,5-triaza-7-phosphaadamantane (TPA) or l-glutamine (GLU), fluorescence quantum yields up to 5% were obtained. AuNC are considered to be very promising for biological labelling, optoelectronic devices and light-emitting materials but the structure-property relationships have still not been fully clarified. To expand the knowledge about the AuNC apart from their fluorescent properties they were studied by X-ray absorption spectroscopy elucidating the oxidation state of the nanoclusters' gold atoms. Based on curve fitting of the XANES

  12. Integrative proteomic analysis of the NMDA NR1 knockdown mouse model reveals effects on central and peripheral pathways associated with schizophrenia and autism spectrum disorders

    PubMed Central

    2014-01-01

    Background Over the last decade, the transgenic N-methyl-D-aspartate receptor (NMDAR) NR1-knockdown mouse (NR1neo−/−) has been investigated as a glutamate hypofunction model for schizophrenia. Recent research has now revealed that the model also recapitulates cognitive and negative symptoms in the continuum of other psychiatric diseases, particularly autism spectrum disorders (ASD). As previous studies have mostly focussed on behavioural readouts, a molecular characterisation of this model will help to identify novel biomarkers or potential drug targets. Methods Here, we have used multiplex immunoassay analyses to investigate peripheral analyte alterations in serum of NR1neo−/− mice, as well as a combination of shotgun label-free liquid chromatography mass spectrometry, bioinformatic pathway analyses, and a shotgun-based 40-plex selected reaction monitoring (SRM) assay to investigate altered molecular pathways in the frontal cortex and hippocampus. All findings were cross compared to identify translatable findings between the brain and periphery. Results Multiplex immunoassay profiling led to identification of 29 analytes that were significantly altered in sera of NR1neo−/− mice. The highest magnitude changes were found for neurotrophic factors (VEGFA, EGF, IGF-1), apolipoprotein A1, and fibrinogen. We also found decreased levels of several chemokines. Following this, LC-MSE profiling led to identification of 48 significantly changed proteins in the frontal cortex and 41 in the hippocampus. In particular, MARCS, the mitochondrial pyruvate kinase, and CamKII-alpha were affected. Based on the combination of protein set enrichment and bioinformatic pathway analysis, we designed orthogonal SRM-assays which validated the abnormalities of proteins involved in synaptic long-term potentiation, myelination, and the ERK-signalling pathway in both brain regions. In contrast, increased levels of proteins involved in neurotransmitter metabolism and release were

  13. [Terahertz Absorption Spectra Simulation of Glutamine Based on Quantum-Chemical Calculation].

    PubMed

    Zhang, Tian-yao; Zhang, Zhao-hui; Zhao, Xiao-yan; Zhang, Han; Yan, Fang; Qian, Ping

    2015-08-01

    With simulation of absorption spectra in THz region based on quantum-chemical calculation, the THz absorption features of target materials can be assigned with theoretical normal vibration modes. This is necessary for deeply understanding the origin of THz absorption spectra. The reliabilities of simulation results mainly depend on the initial structures and theoretical methods used throughout the calculation. In our study, we utilized THz-TDS to obtain the THz absorption spectrum of solid-state L-glutamine. Then three quantum-chemical calculation schemes with different initial structures commonly used in previous studies were proposed to study the inter-molecular interactions' contribution to the THz absorption of glutamine, containing monomer structure, dimer structure and crystal unit cell structure. After structure optimization and vibration modes' calculation based on density functional theory, the calculation results were converted to absorption spectra by Lorentzian line shape function for visual comparison with experimental spectra. The result of dimmer structure is better than monomer structure in number of absorption features while worse than crystal unit cell structure in position of absorption peaks. With the most reliable simulation result from crystal unit cell calculation, we successfully assigned all three experimental absorption peaks of glutamine ranged from 0.3 to 2.6 THz with overall vibration modes. Our study reveals that the crystal unit cell should be used as initial structure during theoretical simulation of solid-state samples' THz absorption spectrum which comprehensively considers not only the intra-molecular interactions but also inter-molecular interactions.

  14. Polycyclic aromatic hydrocarbons obtained by lateral core extension of mesogenic perylenes: absorption and optoelectronic properties.

    PubMed

    Vollbrecht, Joachim; Bock, Harald; Wiebeler, Christian; Schumacher, Stefan; Kitzerow, Heinz

    2014-09-15

    Bilaterally extended perylenes were synthesized, characterized, and used to create organic light-emitting devices. A detailed investigation of the electronic and optical properties, and a comparison of perylene derivatives and compounds with unilaterally and bilaterally extended aromatic cores, reveal unexpected changes of the absorption spectrum, which are in agreement with simulations based on DFT.

  15. Attosecond Transient Absorption Spectroscopy of doubly-excited states in helium

    NASA Astrophysics Data System (ADS)

    Argenti, Luca; Ott, Christian; Pfeifer, Thomas; Martín, Fernando

    2014-04-01

    Theoretical calculations of the XUV attosecond transient absorption spectrum (ATAS) of helium in the doubly-excited state region reproduce recent high-precision measurements, reveal novel means of controlling the dynamics of transiently-bound electronic wavepackets in intense laser fields, and indicates a possible extension of 2D-spectroscopies to the XUV range.

  16. Two-photon absorption by a quantum dot pair

    NASA Astrophysics Data System (ADS)

    Scheibner, Michael; Economou, Sophia E.; Ponomarev, Ilya V.; Jennings, Cameron; Bracker, Allan S.; Gammon, Daniel

    2015-08-01

    The biexciton absorption spectrum of a pair of InAs/GaAs quantum dots is being studied by photoluminescence excitation spectroscopy. An absorption resonance with the characteristics of an instantaneous two-photon process reveals a coherent interdot two-photon transition. Pauli-selective tunneling is being used to demonstrate the transduction of the two-photon coherence into a nonlocal spin singlet state. The two-photon transition can be tuned spectrally by electric field, enabling amplification of its transition strength.

  17. A mixed quantum-classical molecular dynamics study of the hydroxyl stretch in methanol/carbon tetrachloride mixtures: equilibrium hydrogen-bond structure and dynamics at the ground state and the infrared absorption spectrum.

    PubMed

    Kwac, Kijeong; Geva, Eitan

    2011-07-28

    We present a mixed quantum-classical molecular dynamics study of the structure and dynamics of the hydroxyl stretch in methanol/carbon tetrachloride mixtures. One of the methanol molecules is tagged, and its hydroxyl stretch is treated quantum-mechanically, while the remaining degrees of freedom are treated classically. The adiabatic Hamiltonian of the quantum-mechanical hydroxyl is diagonalized on-the-fly to obtain the corresponding adiabatic energy levels and wave functions which depend parametrically on the instantaneous configuration of the classical degrees of freedom. The dynamics of the classical degrees of freedom are in turn affected by the quantum-mechanical state of the tagged hydroxyl stretch via the corresponding Hellmann-Feynman forces. The ability of five different force-field combinations to reproduce the experimental absorption infrared spectrum of the hydroxyl stretch is examined for different isotopomers and on a wide range of compositions. It is found that, in addition to accounting for the anharmonic nature of the hydroxyl stretch, one also has to employ polarizable force fields and account for the damping of the polarizability at short distances. The equilibrium ground-state hydrogen-bonding structure and dynamics is analyzed, and its signature on the absorption infrared spectrum of the hydroxyl stretch is investigated in detail. Five different hydroxyl stretch subpopulations are identified and spectrally assigned: monomers (α), hydrogen-bond acceptors (β), hydrogen-bond donors (γ), simultaneous hydrogen-bond donors and acceptors (δ), and simultaneous hydrogen-bond donors and double-acceptors (ε). The fundamental transition frequencies of the α and β subpopulations are found to be narrowly distributed and to overlap, thereby giving rise to a single narrow band whose intensity is significantly diminished by rotational relaxation. The fundamental transition frequency distributions of the γ, δ, and ε subpopulations are found to be

  18. Absorption mode FTICR mass spectrometry imaging.

    PubMed

    Smith, Donald F; Kilgour, David P A; Konijnenburg, Marco; O'Connor, Peter B; Heeren, Ron M A

    2013-12-03

    Fourier transform ion cyclotron resonance mass spectrometry offers the highest mass resolving power for molecular imaging experiments. This high mass resolving power ensures that closely spaced peaks at the same nominal mass are resolved for proper image generation. Typically higher magnetic fields are used to increase mass resolving power. However, a gain in mass resolving power can also be realized by phase correction of the data for absorption mode display. In addition to mass resolving power, absorption mode offers higher mass accuracy and signal-to-noise ratio over the conventional magnitude mode. Here, we present the first use of absorption mode for Fourier transform ion cyclotron resonance mass spectrometry imaging. The Autophaser algorithm is used to phase correct each spectrum (pixel) in the image, and then, these parameters are used by the Chameleon work-flow based data processing software to generate absorption mode "Datacubes" for image and spectral viewing. Absorption mode reveals new mass and spatial features that are not resolved in magnitude mode and results in improved selected ion image contrast.

  19. Soliton absorption spectroscopy

    PubMed Central

    Kalashnikov, V. L.; Sorokin, E.

    2010-01-01

    We analyze optical soliton propagation in the presence of weak absorption lines with much narrower linewidths as compared to the soliton spectrum width using the novel perturbation analysis technique based on an integral representation in the spectral domain. The stable soliton acquires spectral modulation that follows the associated index of refraction of the absorber. The model can be applied to ordinary soliton propagation and to an absorber inside a passively modelocked laser. In the latter case, a comparison with water vapor absorption in a femtosecond Cr:ZnSe laser yields a very good agreement with experiment. Compared to the conventional absorption measurement in a cell of the same length, the signal is increased by an order of magnitude. The obtained analytical expressions allow further improving of the sensitivity and spectroscopic accuracy making the soliton absorption spectroscopy a promising novel measurement technique. PMID:21151755

  20. Soft X-Ray Irradiation Effects of Li2O2, Li2CO3 and Li2O Revealed by Absorption Spectroscopy

    PubMed Central

    Qiao, Ruimin; Chuang, Yi-De; Yan, Shishen; Yang, Wanli

    2012-01-01

    Li2O2, Li2CO3, and Li2O are three critical compounds in lithium-air and lithium-ion energy storage systems. Extensive measurements have been carried out to study the chemical species and their evolutions at difference stages of the device operation. While x-ray spectroscopy has been demonstrated to be one of the most powerful tools for such purpose, no systematic study on the irradiation effects have been reported. Here we carry out extensive time, position, and irradiation dependent Li K-edge soft x-ray absorption spectroscopy on these compounds with so far the best energy resolution. The ultra-high resolution in the current study allows the features in the absorption spectra to be well-resolved. The spectral lineshape thus serves as the fingerprints of these compounds, enabling the tracking of their evolution under x-ray irradiation. We found that both Li2O2 and Li2CO3 evidently evolve towards Li2O under the soft x-ray irradiation with Li2CO3 exhibiting a surprisingly higher sensitivity to x-rays than Li2O2. On the other hand, Li2O remains the most stable compound despite experiencing substantial irradiation dose. We thus conclude that high resolution soft x-ray spectroscopy could unambiguously fingerprint different chemical species, but special cautions on irradiation effects would be needed in performing the experiments and interpreting the data properly. PMID:23145116

  1. Stellar Spectrum Synthesizer

    ERIC Educational Resources Information Center

    Landegren, G. F.

    1975-01-01

    Describes a device which employs two diffraction gratings and three or four simple lenses to produce arbitrary absorption or emission spectra that may be doppler shifted and spectroscopically examined by students some distance away. It may be regarded as a sort of artificial star whose spectrum may be analyzed as an undergraduate laboratory…

  2. Transient absorption of vibrationally excited ice Ih

    NASA Astrophysics Data System (ADS)

    Dokter, Adriaan M.; Bakker, Huib J.

    2008-01-01

    The ultrafast dynamics of HDO :D2O ice Ih at 180K is studied by midinfrared ultrafast pump-probe spectroscopy. The vibrational relaxation of HDO :D2O ice is observed to proceed via an intermediate state, which has a blueshifted absorption spectrum. Polarization resolved measurements reveal that the intermediate state is part of the intramolecular relaxation pathway of the HDO molecule. In addition, slow dynamics on a time scale of the order of 10-100ps is observed, related to thermally induced collective reorganizations of the ice lattice. The transient absorption line shape is analyzed within a Lippincott-Schroeder model for the OH-stretch potential. This analysis identifies the main mechanism behind the strong spectral broadening of the vOH=1→2 transition.

  3. Discrepancy between WISC-III and WISC-IV Cognitive Profile in Autism Spectrum: What Does It Reveal about Autistic Cognition?

    PubMed Central

    Nader, Anne-Marie; Jelenic, Patricia; Soulières, Isabelle

    2015-01-01

    The cognitive profile and measured intellectual level vary according to assessment tools in children on the autism spectrum, much more so than in typically developing children. The recent inclusion of intellectual functioning in the diagnostic process for autism spectrum disorders leads to the crucial question on how to assess intelligence in autism, especially as some tests and subtests seem more sensitive to certain neurodevelopmental conditions. Our first aim was to examine the cognitive profile on the current version of the most widely used test, the Wechsler Intelligence Scales for Children (WISC-IV), for a homogenous subgroup of children on the autism spectrum, i.e. corresponding to DSM-IV diagnosis of “autism”. The second aim was to compare cognitive profiles obtained on the third edition versus 4th edition of WISC, in order to verify whether the WISC-IV yields a more distinctive cognitive profile in autistic children. The third aim was to examine the impact of the WISC-IV on the cognitive profile of another subgroup, children with Asperger’s Syndrome. 51 autistic, 15 Asperger and 42 typically developing children completed the WISC-IV and were individually matched to children who completed the WISC-III. Divergent WISC-IV profiles were observed despite no significant intelligence quotient difference between groups. Autistic children scored significantly higher on the Perceptual Reasoning Index than on the Verbal Comprehension Index, a discrepancy that nearly tripled in comparison to WISC-III results. Asperger children scored higher on the VCI than on other indexes, with the lowest score found on the Processing Speed Index. WISC-IV cognitive profiles were consistent with, but more pronounced than WISC-III profiles. Cognitive profiles are a valuable diagnostic tool for differential diagnosis, keeping in mind that children on the autism spectrum might be more sensitive to the choice of subtests used to assess intelligence. PMID:26673881

  4. Discrepancy between WISC-III and WISC-IV Cognitive Profile in Autism Spectrum: What Does It Reveal about Autistic Cognition?

    PubMed

    Nader, Anne-Marie; Jelenic, Patricia; Soulières, Isabelle

    2015-01-01

    The cognitive profile and measured intellectual level vary according to assessment tools in children on the autism spectrum, much more so than in typically developing children. The recent inclusion of intellectual functioning in the diagnostic process for autism spectrum disorders leads to the crucial question on how to assess intelligence in autism, especially as some tests and subtests seem more sensitive to certain neurodevelopmental conditions. Our first aim was to examine the cognitive profile on the current version of the most widely used test, the Wechsler Intelligence Scales for Children (WISC-IV), for a homogenous subgroup of children on the autism spectrum, i.e. corresponding to DSM-IV diagnosis of "autism". The second aim was to compare cognitive profiles obtained on the third edition versus 4th edition of WISC, in order to verify whether the WISC-IV yields a more distinctive cognitive profile in autistic children. The third aim was to examine the impact of the WISC-IV on the cognitive profile of another subgroup, children with Asperger's Syndrome. 51 autistic, 15 Asperger and 42 typically developing children completed the WISC-IV and were individually matched to children who completed the WISC-III. Divergent WISC-IV profiles were observed despite no significant intelligence quotient difference between groups. Autistic children scored significantly higher on the Perceptual Reasoning Index than on the Verbal Comprehension Index, a discrepancy that nearly tripled in comparison to WISC-III results. Asperger children scored higher on the VCI than on other indexes, with the lowest score found on the Processing Speed Index. WISC-IV cognitive profiles were consistent with, but more pronounced than WISC-III profiles. Cognitive profiles are a valuable diagnostic tool for differential diagnosis, keeping in mind that children on the autism spectrum might be more sensitive to the choice of subtests used to assess intelligence.

  5. The molecular pathway to ZIF-7 microrods revealed by in situ time-resolved small- and wide-angle X-ray scattering, quick-scanning extended X-ray absorption spectroscopy, and DFT calculations.

    PubMed

    Goesten, Maarten; Stavitski, Eli; Pidko, Evgeny A; Gücüyener, Canan; Boshuizen, Bart; Ehrlich, Steven N; Hensen, Emiel J M; Kapteijn, Freek; Gascon, Jorge

    2013-06-10

    We present an in situ small- and wide-angle X-ray scattering (SAXS/WAXS) and quick-scanning extended X-ray absorption fine-structure (QEXAFS) spectroscopy study on the crystallization of the metal-organic framework ZIF-7. In combination with DFT calculations, the self-assembly and growth of ZIF-7 microrods together with the chemical function of the crystal growth modulator (diethylamine) are revealed at all relevant length scales, from the atomic to the full crystal size.

  6. Studies of cavity enhanced absorption spectroscopy for weak absorption gas measurements

    NASA Astrophysics Data System (ADS)

    Li, Liucheng; Duo, Liping; Gong, Deyu; Ma, Yanhua; Zhang, Zhiguo; Wang, Yuanhu; Zhou, Dongjian; Jin, Yuqi

    2017-01-01

    In order to determine the concentrations of trace amount metastable species in chemical lasers, an off-axis cavity enhanced absorption spectrometer for the detection of weak absorption gases has been built with a noise equivalent absorption sensitivity of 1.6x10-8 cm-1. The absorption spectrum of trace amount gaseous ammonia and water vapor was obtained with a spectral resolution of about 78 MHz. A multiple-line absorption spectroscopic method to determine the temperature of gaseous ammonia has been developed by use of multiple lines of ammonia molecule absorption spectrum.

  7. Dynamics of Charged Excitons and Biexcitons in CsPbBr3 Perovskite Nanocrystals Revealed by Femtosecond Transient-Absorption and Single-Dot Luminescence Spectroscopy.

    PubMed

    Yarita, Naoki; Tahara, Hirokazu; Ihara, Toshiyuki; Kawawaki, Tokuhisa; Sato, Ryota; Saruyama, Masaki; Teranishi, Toshiharu; Kanemitsu, Yoshihiko

    2017-03-16

    Metal-halide perovskite nanocrystals (NCs) are promising photonic materials for use in solar cells, light-emitting diodes, and lasers. The optoelectronic properties of these devices are determined by the excitons and exciton complexes confined in their NCs. In this study, we determined the relaxation dynamics of charged excitons and biexcitons in CsPbBr3 NCs using femtosecond transient-absorption (TA), time-resolved photoluminescence (PL), and single-dot second-order photon correlation spectroscopy. Decay times of ∼40 and ∼200 ps were obtained from the TA and PL decay curves for biexcitons and charged excitons, respectively, in NCs with an average edge length of 7.7 nm. The existence of charged excitons even under weak photoexcitation was confirmed by the second-order photon correlation measurements. We found that charged excitons play a dominant role in luminescence processes of CsPbBr3 NCs. Combining different spectroscopic techniques enabled us to clarify the dynamical behaviors of excitons, charged excitons, and biexcitons.

  8. Electronic structure of self-doped layered Eu3F4Bi2S4 material revealed by x-ray absorption spectroscopy and photoelectron spectromicroscopy

    NASA Astrophysics Data System (ADS)

    Paris, E.; Sugimoto, T.; Wakita, T.; Barinov, A.; Terashima, K.; Kandyba, V.; Proux, O.; Kajitani, J.; Higashinaka, R.; Matsuda, T. D.; Aoki, Y.; Yokoya, T.; Mizokawa, T.; Saini, N. L.

    2017-01-01

    We have studied the electronic structure of Eu3F4Bi2S4 using a combination of Eu L3-edge x-ray absorption spectroscopy (XAS) and space-resolved angle-resolved photoemission spectroscopy (ARPES). From the Eu L3-edge XAS, we have found that the Eu in this system is in mixed valence state with coexistence of Eu2 +/Eu3 + . The bulk charge doping was estimated to be ˜0.3 per Bi site in Eu3F4Bi2S4 , which corresponds to the nominal x in a typical REO1 -xFxBiS2 system (RE: rare-earth elements). From the space-resolved ARPES, we have ruled out the possibility of any microscale phase separation of Eu valence in the system. Using a microfocused beam we have observed the band structure as well as the Fermi surface that appeared similar to other compounds of this family with disconnected rectangular electronlike pockets around the X point. The Luttinger volume analysis gives the effective carrier to be 0.23 electrons per Bi site in Eu3F4Bi2S4 , indicating that the system is likely to be in the underdoped region of its superconducting phase diagram.

  9. A (14)C-leucine absorption, distribution, metabolism and excretion (ADME) study in adult Sprague-Dawley rat reveals β-hydroxy-β-methylbutyrate as a metabolite.

    PubMed

    Lee, Anthony J; Beno, David W A; Zhang, Xiaolin; Shapiro, Robin; Mason, Mark; Mason-Bright, Tanita; Surber, Bruce; Edens, Neilé K

    2015-05-01

    Leucine is an essential branched-chain amino acid that acts as a substrate for protein synthesis and as a signaling molecule. Leucine not incorporated into muscle protein is ultimately oxidized through intermediates such as β-hydroxy-β-methylbutyrate (HMB) which itself is reported to enhance muscle mass and function in rats and humans. HMB has been reported in the plasma following oral leucine administration in sheep and pigs but not in Sprague-Dawley rats, the standard preclinical model. Therefore, we conducted radiolabeled absorption, distribution, metabolism and excretion (ADME) studies in rats using a low (3 mg/kg) or high dose (1,000 mg/kg) of (14)C-leucine. Blood, tissue, and urine samples were analyzed for (14)C-leucine and its metabolites by HPLC-MS. Our results show for the first time that (14)C-HMB appears in plasma and urine of rats following an oral dose of (14)C-leucine. (14)C-leucine appears in plasma as (14)C-α-ketoisocaproic acid (KIC) with a slower time course than (14)C-HMB, a putative product of KIC. Further, two novel metabolites of leucine were detected in urine, N-acetyl leucine and glycyl leucine. Mass balance studies demonstrate that excretory routes accounted for no more than 0.9 % of the radiolabel and approximately 61 % of the dose was recovered in the carcass. Approximately 65 % of the dose was recovered in total, suggesting that approximately one-third of the leucine dose is oxidized to CO2. In conclusion, this study demonstrates endogenous production of HMB from leucine in adult rats, a standard preclinical model used to guide design of clinical trials in nutrition.

  10. Cu K-edge X-ray Absorption Spectroscopy Reveals Differential Copper Coordimation Within Amyloid-beta Oligomers Compared to Amyloid-beta Monomers

    SciTech Connect

    J Shearer; P Callan; T Tran; V Szalai

    2011-12-31

    The fatal neurodegenerative disorder Alzheimer's disease (AD) has been linked to the formation of soluble neurotoxic oligomers of amyloid-{beta} (A{beta}) peptides. These peptides have high affinities for copper cations. Despite their potential importance in AD neurodegeneration few studies have focused on probing the Cu{sup 2+/1+} coordination environment within A{beta} oligomers. Herein we present a Cu K-edge X-ray absorption spectroscopic study probing the copper-coordination environment within oligomers of A{beta}(42) (sequence: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA). We find that the Cu{sup 2+} cation is contained within a square planar mixed N/O ligand environment within A{beta}(42) oligomers, which is similar to the copper coordination environment of the monomeric forms of {l_brace}Cu{sup II}A{beta}(40){r_brace} and {l_brace}Cu{sup II}A{beta}(16){r_brace}. Reduction of the Cu{sup 2+} cation within the A{beta}(42) oligomers to Cu{sup 1+} yields a highly dioxygen sensitive copper-species that contains Cu{sup 1+} in a tetrahedral coordination geometry. This can be contrasted with monomers of {l_brace}Cu{sup I}A{beta}(40){r_brace} and {l_brace}Cu{sup I}A{beta}(16){r_brace}, which contain copper in a dioxygen inert linear bis-histidine ligand environment [Shearer and Szalai, J. Am. Chem. Soc., 2008, 130, 17826]. The biological implications of these findings are discussed.

  11. High-energy resolution X-ray absorption and emission spectroscopy reveals insight into unique selectivity of La-based nanoparticles for CO2

    PubMed Central

    Hirsch, Ofer; Kvashnina, Kristina O.; Luo, Li; Süess, Martin J.; Glatzel, Pieter; Koziej, Dorota

    2015-01-01

    The lanthanum-based materials, due to their layered structure and f-electron configuration, are relevant for electrochemical application. Particularly, La2O2CO3 shows a prominent chemoresistive response to CO2. However, surprisingly less is known about its atomic and electronic structure and electrochemically significant sites and therefore, its structure–functions relationships have yet to be established. Here we determine the position of the different constituents within the unit cell of monoclinic La2O2CO3 and use this information to interpret in situ high-energy resolution fluorescence-detected (HERFD) X-ray absorption near-edge structure (XANES) and valence-to-core X-ray emission spectroscopy (vtc XES). Compared with La(OH)3 or previously known hexagonal La2O2CO3 structures, La in the monoclinic unit cell has a much lower number of neighboring oxygen atoms, which is manifested in the whiteline broadening in XANES spectra. Such a superior sensitivity to subtle changes is given by HERFD method, which is essential for in situ studying of the interaction with CO2. Here, we study La2O2CO3-based sensors in real operando conditions at 250 °C in the presence of oxygen and water vapors. We identify that the distribution of unoccupied La d-states and occupied O p- and La d-states changes during CO2 chemoresistive sensing of La2O2CO3. The correlation between these spectroscopic findings with electrical resistance measurements leads to a more comprehensive understanding of the selective adsorption at La site and may enable the design of new materials for CO2 electrochemical applications. PMID:26668362

  12. Absorption, metabolism and effect of compatibility on absorption of qishenyiqi dropping pill.

    PubMed

    Han, Yan-Qi; Wang, Jing; Cui, Qing-Xin; Wang, Li-Qiang; Cheng, Bin-Feng; Zhao, Hong-Zhi; Jiang, Min; Bai, Gang; Luo, Guo-An

    2014-04-01

    Qishenyiqi dropping pill (QSYQ), is a traditional Chinese medicine (TCM) prescription for treating heart diseases in China. Knowledge concerning the systemic identification of active compounds and metabolic components of QSYQ is generally lacking. Therefore, it is essential to develop a valid method for the analysis of active compounds of the combined prescription and determination of interactions among the herbs. The absorbable compounds and metabolites of QSYQ were profiled using computational chemistry prediction, an improved everted gut sac in vitro experiment, the Caco-2 cell monolayer in vitro test, a rat in vivo experiment and ultra-performance liquid chromatography/diode array detection/quadrupole-time of flight mass spectrum (UPLC/DAD/Q-TOF MS). In total, 42 prototype compounds were recognized as absorbable compounds, and eight metabolites were identified by UPLC/DAD/Q-TOF MS. The absorption rates of phenolic acids and saponins were significantly improved and the absorption of isoflavone was inhibited after compatibility. The volatile oil component had an improved effect on the absorption of other compounds, while its own absorption was inhibited. In conclusion, the present study established a rapid and effective strategy for demonstrating the absorption and metabolism of QSYQ and revealing the compatible relationship among herbs. This investigation can provide a reference for the compatibility of prescriptions and the modernization of TCM.

  13. Economic strategies of plant absorptive roots vary with root diameter

    NASA Astrophysics Data System (ADS)

    Kong, D. L.; Wang, J. J.; Kardol, P.; Wu, H. F.; Zeng, H.; Deng, X. B.; Deng, Y.

    2016-01-01

    Plant roots typically vary along a dominant ecological axis, the root economics spectrum, depicting a tradeoff between resource acquisition and conservation. For absorptive roots, which are mainly responsible for resource acquisition, we hypothesized that root economic strategies differ with increasing root diameter. To test this hypothesis, we used seven plant species (a fern, a conifer, and five angiosperms from south China) for which we separated absorptive roots into two categories: thin roots (thickness of root cortex plus epidermis < 247 µm) and thick roots. For each category, we analyzed a range of root traits related to resource acquisition and conservation, including root tissue density, different carbon (C), and nitrogen (N) fractions (i.e., extractive, acid-soluble, and acid-insoluble fractions) as well as root anatomical traits. The results showed significant relationships among root traits indicating an acquisition-conservation tradeoff for thin absorptive roots while no such trait relationships were found for thick absorptive roots. Similar results were found when reanalyzing data of a previous study including 96 plant species. The contrasting economic strategies between thin and thick absorptive roots, as revealed here, may provide a new perspective on our understanding of the root economics spectrum.

  14. K- and L-edge X-ray absorption spectrum calculations of closed-shell carbon, silicon, germanium, and sulfur compounds using damped four-component density functional response theory.

    PubMed

    Fransson, Thomas; Burdakova, Daria; Norman, Patrick

    2016-05-21

    X-ray absorption spectra of carbon, silicon, germanium, and sulfur compounds have been investigated by means of damped four-component density functional response theory. It is demonstrated that a reliable description of relativistic effects is obtained at both K- and L-edges. Notably, an excellent agreement with experimental results is obtained for L2,3-spectra-with spin-orbit effects well accounted for-also in cases when the experimental intensity ratio deviates from the statistical one of 2 : 1. The theoretical results are consistent with calculations using standard response theory as well as recently reported real-time propagation methods in time-dependent density functional theory, and the virtues of different approaches are discussed. As compared to silane and silicon tetrachloride, an anomalous error in the absolute energy is reported for the L2,3-spectrum of silicon tetrafluoride, amounting to an additional spectral shift of ∼1 eV. This anomaly is also observed for other exchange-correlation functionals, but it is seen neither at other silicon edges nor at the carbon K-edge of fluorine derivatives of ethene. Considering the series of molecules SiH4-XFX with X = 1, 2, 3, 4, a gradual divergence from interpolated experimental ionization potentials is observed at the level of Kohn-Sham density functional theory (DFT), and to a smaller extent with the use of Hartree-Fock. This anomalous error is thus attributed partly to difficulties in correctly emulating the electronic structure effects imposed by the very electronegative fluorines, and partly due to inconsistencies in the spurious electron self-repulsion in DFT. Substitution with one, or possibly two, fluorine atoms is estimated to yield small enough errors to allow for reliable interpretations and predictions of L2,3-spectra of more complex and extended silicon-based systems.

  15. Quadrupole transitions revealed by Borrmann spectroscopy.

    PubMed

    Pettifer, Robert F; Collins, Stephen P; Laundy, David

    2008-07-10

    The Borrmann effect-a dramatic increase in transparency to X-ray beams-is observed when X-rays satisfying Bragg's law diffract through a perfect crystal. The minimization of absorption seen in the Borrmann effect has been explained by noting that the electric field of the X-ray beam approaches zero amplitude at the crystal planes, thus avoiding the atoms. Here we show experimentally that under conditions of absorption suppression, the weaker electric quadrupole absorption transitions are effectively enhanced to such a degree that they can dominate the absorption spectrum. This effect can be exploited as an atomic spectroscopy technique; we show that quadrupole transitions give rise to additional structure at the L(1), L(2) and L(3) absorption edges of gadolinium in gadolinium gallium garnet, which mark the onset of excitations from 2s, 2p(1/2) and 2p(3/2) atomic core levels, respectively. Although the Borrmann effect served to underpin the development of the theory of X-ray diffraction, this is potentially the most important experimental application of the phenomenon since its first observation seven decades ago. Identifying quadrupole features in X-ray absorption spectroscopy is central to the interpretation of 'pre-edge' spectra, which are often taken to be indicators of local symmetry, valence and atomic environment. Quadrupolar absorption isolates states of different symmetries to that of the dominant dipole spectrum, and typically reveals orbitals that dominate the electronic ground-state properties of lanthanides and 3d transition metals, including magnetism. Results from our Borrmann spectroscopy technique feed into contemporary discussions regarding resonant X-ray diffraction and the nature of pre-edge lines identified by inelastic X-ray scattering. Furthermore, because the Borrmann effect has been observed in photonic materials, it seems likely that the quadrupole enhancement reported here will play an important role in modern optics.

  16. An eye-tracking method to reveal the link between gazing patterns and pragmatic abilities in high functioning autism spectrum disorders

    PubMed Central

    Grynszpan, Ouriel; Nadel, Jacqueline

    2015-01-01

    The present study illustrates the potential advantages of an eye-tracking method for exploring the association between visual scanning of faces and inferences of mental states. Participants watched short videos involving social interactions and had to explain what they had seen. The number of cognition verbs (e.g., think, believe, know) in their answers were counted. Given the possible use of peripheral vision that could confound eye-tracking measures, we added a condition using a gaze-contingent viewing window: the entire visual display is blurred, expect for an area that moves with the participant’s gaze. Eleven typical adults and eleven high functioning adults with Autism Spectrum Disorders (ASD) were recruited. The condition employing the viewing window yielded strong correlations between the average duration of fixations, the ratio of cognition verbs and standard measures of social disabilities. PMID:25642182

  17. An eye-tracking method to reveal the link between gazing patterns and pragmatic abilities in high functioning autism spectrum disorders.

    PubMed

    Grynszpan, Ouriel; Nadel, Jacqueline

    2014-01-01

    The present study illustrates the potential advantages of an eye-tracking method for exploring the association between visual scanning of faces and inferences of mental states. Participants watched short videos involving social interactions and had to explain what they had seen. The number of cognition verbs (e.g., think, believe, know) in their answers were counted. Given the possible use of peripheral vision that could confound eye-tracking measures, we added a condition using a gaze-contingent viewing window: the entire visual display is blurred, expect for an area that moves with the participant's gaze. Eleven typical adults and eleven high functioning adults with Autism Spectrum Disorders (ASD) were recruited. The condition employing the viewing window yielded strong correlations between the average duration of fixations, the ratio of cognition verbs and standard measures of social disabilities.

  18. Morphing technique reveals intact perception of object motion and disturbed perception of emotional expressions by low-functioning adolescents with Autism Spectrum Disorder.

    PubMed

    Han, Bora; Tijus, Charles; Le Barillier, Florence; Nadel, Jacqueline

    2015-12-01

    A morphing procedure has been designed to compare directly the perception of emotional expressions and of moving objects. Morphing tasks were presented to 12 low-functioning teenagers with Autism Spectrum Disorder (LF ASD) compared to 12 developmental age-matched typical children and a group presenting ceiling performance. In a first study, when presented with morphed stimuli of objects and emotional faces, LF ASD showed an intact perception of object change of state together with an impaired perception of emotional facial change of state. In a second study, an eye-tracker recorded visual exploration of morphed emotional stimuli displayed by a human face and a robotic set-up. Facing the morphed robotic stimuli, LF ASD displayed equal duration of fixations toward emotional regions and toward mechanical sources of motion, while the typical groups tracked the emotional regions only. Altogether the findings of the two studies suggest that individuals with ASD process motion rather than emotional signals when facing facial expressions.

  19. Global methylation profiling of lymphoblastoid cell lines reveals epigenetic contributions to autism spectrum disorders and a novel autism candidate gene, RORA, whose protein product is reduced in autistic brain

    PubMed Central

    Nguyen, AnhThu; Rauch, Tibor A.; Pfeifer, Gerd P.; Hu, Valerie W.

    2010-01-01

    Autism is currently considered a multigene disorder with epigenetic influences. To investigate the contribution of DNA methylation to autism spectrum disorders, we have recently completed large-scale methylation profiling by CpG island microarray analysis of lymphoblastoid cell lines derived from monozygotic twins discordant for diagnosis of autism and their nonautistic siblings. Methylation profiling revealed many candidate genes differentially methylated between discordant MZ twins as well as between both twins and nonautistic siblings. Bioinformatics analysis of the differentially methylated genes demonstrated enrichment for high-level functions including gene transcription, nervous system development, cell death/survival, and other biological processes implicated in autism. The methylation status of 2 of these candidate genes, BCL-2 and retinoic acid-related orphan receptor alpha (RORA), was further confirmed by bisulfite sequencing and methylation-specific PCR, respectively. Immunohistochemical analyses of tissue arrays containing slices of the cerebellum and frontal cortex of autistic and age- and sex-matched control subjects revealed decreased expression of RORA and BCL-2 proteins in the autistic brain. Our data thus confirm the role of epigenetic regulation of gene expression via differential DNA methylation in idiopathic autism, and furthermore link molecular changes in a peripheral cell model with brain pathobiology in autism.—Nguyen, A., Rauch, T. A., Pfeifer, G. P., Hu, V. W. Global methylation profiling of lymphoblastoid cell lines reveals epigenetic contributions to autism spectrum disorders and a novel autism candidate gene, RORA, whose protein product is reduced in autistic brain. PMID:20375269

  20. Enhancement of broadband optical absorption in photovoltaic devices by band-edge effect of photonic crystals.

    PubMed

    Tanaka, Yoshinori; Kawamoto, Yosuke; Fujita, Masayuki; Noda, Susumu

    2013-08-26

    We numerically investigate broadband optical absorption enhancement in thin, 400-nm thick microcrystalline silicon (µc-Si) photovoltaic devices by photonic crystals (PCs). We realize absorption enhancement by coupling the light from the free space to the large area resonant modes at the photonic band-edge induced by the photonic crystals. We show that multiple photonic band-edge modes can be produced by higher order modes in the vertical direction of the Si photovoltaic layer, which can enhance the absorption on multiple wavelengths. Moreover, we reveal that the photonic superlattice structure can produce more photonic band-edge modes that lead to further optical absorption. The absorption average in wavelengths of 500-1000 nm weighted to the solar spectrum (AM 1.5) increases almost twice: from 33% without photonic crystal to 58% with a 4 × 4 period superlattice photonic crystal; our result outperforms the Lambertian textured structure.

  1. Energy levels and far-infrared optical absorption of impurity doped semiconductor nanorings: Intense laser and electric fields effects

    NASA Astrophysics Data System (ADS)

    Barseghyan, M. G.

    2016-11-01

    The effects of electron-impurity interaction on energy levels and far-infrared absorption in semiconductor nanoring under the action of intense laser and lateral electric fields have been investigated. Numerical calculations are performed using exact diagonalization technique. It is found that the electron-impurity interaction and external fields change the energy spectrum dramatically, and also have significant influence on the absorption spectrum. Strong dependence on laser field intensity and electric field of lowest energy levels, also supported by the Coulomb interaction with impurity, is clearly revealed.

  2. RNA sequencing of transformed lymphoblastoid cells from siblings discordant for autism spectrum disorders reveals transcriptomic and functional alterations: Evidence for sex-specific effects.

    PubMed

    Tylee, Daniel S; Espinoza, Alfred J; Hess, Jonathan L; Tahir, Muhammad A; McCoy, Sarah Y; Rim, Joshua K; Dhimal, Totadri; Cohen, Ori S; Glatt, Stephen J

    2017-03-01

    Genome-wide expression studies of samples derived from individuals with autism spectrum disorder (ASD) and their unaffected siblings have been widely used to shed light on transcriptomic differences associated with this condition. Females have historically been under-represented in ASD genomic studies. Emerging evidence from studies of structural genetic variants and peripheral biomarkers suggest that sex-differences may exist in the biological correlates of ASD. Relatively few studies have explicitly examined whether sex-differences exist in the transcriptomic signature of ASD. The present study quantified genome-wide expression values by performing RNA sequencing on transformed lymphoblastoid cell lines and identified transcripts differentially expressed between same-sex, proximal-aged sibling pairs. We found that performing separate analyses for each sex improved our ability to detect ASD-related transcriptomic differences; we observed a larger number of dysregulated genes within our smaller set of female samples (n = 12 sibling pairs), as compared with the set of male samples (n = 24 sibling pairs), with small, but statistically significant overlap between the sexes. Permutation-based gene-set analyses and weighted gene co-expression network analyses also supported the idea that the transcriptomic signature of ASD may differ between males and females. We discuss our findings in the context of the relevant literature, underscoring the need for future ASD studies to explicitly account for differences between the sexes. Autism Res 2017, 10: 439-455. © 2016 International Society for Autism Research, Wiley Periodicals, Inc.

  3. Measurement of the ionization state and electron temperature of plasma during the ablation stage of a wire-array Z pinch using absorption spectroscopy.

    PubMed

    Ivanov, V V; Hakel, P; Mancini, R C; Chittenden, J P; Anderson, A; Durmaz, T; Wiewior, P; Papp, D; Altemara, S D; Astanovitskiy, A L; Chalyy, O

    2011-06-03

    Wire-array plasmas were investigated in the nonradiative ablation stage via x-ray absorption spectroscopy. A laser-produced Sm plasma was used to backlight Al wire arrays. The Sm spectrum was simultaneously observed by two spectrometers: one recorded the unattenuated spectrum and the other the transmission spectrum with 1.45-1.55 keV K-shell absorption lines. Analysis of absorption spectra revealed electron temperature in the range of 10-30 eV and the presence of F-, O-, N- and C-like Al ions in the absorbing plasma. A comparison of this electron temperature with the postprocessed absorption spectra of a 2D MHD simulation yields results in general agreement with the data analysis.

  4. Network-based analysis reveals stronger local diffusion-based connectivity and different correlations with oral language skills in brains of children with high functioning autism spectrum disorders.

    PubMed

    Li, Hai; Xue, Zhong; Ellmore, Timothy M; Frye, Richard E; Wong, Stephen T C

    2014-02-01

    Neuroimaging has uncovered both long-range and short-range connectivity abnormalities in the brains of individuals with autism spectrum disorders (ASD). However, the precise connectivity abnormalities and the relationship between these abnormalities and cognition and ASD symptoms have been inconsistent across studies. Indeed, studies find both increases and decreases in connectivity, suggesting that connectivity changes in the ASD brain are not merely due to abnormalities in specific connections, but rather, due to changes in the structure of the network in which the brain areas interact (i.e., network topology). In this study, we examined the differences in the network topology between high-functioning ASD patients and age and gender matched typically developing (TD) controls. After quantitatively characterizing the whole-brain connectivity network using diffusion tensor imaging (DTI) data, we searched for brain regions with different connectivity between ASD and TD. A measure of oral language ability was then correlated with the connectivity changes to determine the functional significance of such changes. Whole-brain connectivity measures demonstrated greater local connectivity and shorter path length in ASD as compared to TD. Stronger local connectivity was found in ASD, especially in regions such as the left superior parietal lobule, the precuneus and angular gyrus, and the right supramarginal gyrus. The relationship between oral language ability and local connectivity within these regions was significantly different between ASD and TD. Stronger local connectivity was associated with better performance in ASD and poorer performance in TD. This study supports the notion that increased local connectivity is compensatory for supporting cognitive function in ASD.

  5. Molecular Typing of Enterobacteriaceae from Pig Holdings in North-Western Germany Reveals Extended- Spectrum and AmpC β-Lactamases Producing but no Carbapenem Resistant Ones.

    PubMed

    García-Cobos, Silvia; Köck, Robin; Mellmann, Alexander; Frenzel, Julia; Friedrich, Alexander W; Rossen, John W A

    2015-01-01

    The increase of extended- spectrum β-lactamase-producing Enterobacteriaceae (ESBL-E) in humans and in food-producing animals is of public health concern. The latter could contribute to spreading of these bacteria or their resistance genes to humans. Several studies have reported the isolation of third generation cephalosporin resistant bacteria in livestock animals. However, the number of samples and the methodology used differ considerably between studies limiting comparability and prevalence assessment. In the present study, a total of 564 manure and dust samples were collected from 47 pig farms in Northern Germany and analysed to determine the prevalence of ESBL-E. Molecular typing and characterization of resistance genes was performed for all ESBL-E isolates. ESBL-E isolates were found in 55.3% of the farms. ESBL-Escherichia coli was found in 18.8% of the samples, ESBL-Klebsiella pneumoniae in 0.35%. The most prevalent ESBL genes among E. coli were CTX-M-1 like (68.9%), CTX-M-15 like (16%) and CTX-M-9 group (14.2%). In 20% of the latter two, also the OXA-1 like gene was found resulting in a combination of genes typical for isolates from humans. Genetic relation was found between isolates not only from the same, but also from different farms, with multilocus sequence type (ST) 10 being predominant among the E. coli isolates. In conclusion, we showed possible spread of ESBL-E between farms and the presence of resistance genes and STs previously shown to be associated with human isolates. Follow-up studies are required to monitor the extent and pathways of ESBL-E transmission between farms, animals and humans.

  6. Novel Candidate Genes and a Wide Spectrum of Structural and Point Mutations Responsible for Inherited Retinal Dystrophies Revealed by Exome Sequencing

    PubMed Central

    de Castro-Miró, Marta; Tonda, Raul; Escudero-Ferruz, Paula; Andrés, Rosa; Mayor-Lorenzo, Andrés; Castro, Joaquín; Ciccioli, Marcela; Hidalgo, Daniel A.; Rodríguez-Ezcurra, Juan José; Farrando, Jorge; Pérez-Santonja, Juan J.; Cormand, Bru; Marfany, Gemma

    2016-01-01

    Background NGS-based genetic diagnosis has completely revolutionized the human genetics field. In this study, we have aimed to identify new genes and mutations by Whole Exome Sequencing (WES) responsible for inherited retinal dystrophies (IRD). Methods A cohort of 33 pedigrees affected with a variety of retinal disorders was analysed by WES. Initial prioritization analysis included around 300 IRD-associated genes. In non-diagnosed families a search for pathogenic mutations in novel genes was undertaken. Results Genetic diagnosis was attained in 18 families. Moreover, a plausible candidate is proposed for 10 more cases. Two thirds of the mutations were novel, including 4 chromosomal rearrangements, which expand the IRD allelic heterogeneity and highlight the contribution of private mutations. Our results prompted clinical re-evaluation of some patients resulting in assignment to a syndromic instead of non-syndromic IRD. Notably, WES unveiled four new candidates for non-syndromic IRD: SEMA6B, CEP78, CEP250, SCLT1, the two latter previously associated to syndromic disorders. We provide functional data supporting that missense mutations in CEP250 alter cilia formation. Conclusion The diagnostic efficiency of WES, and strictly following the ACMG/AMP criteria is 55% in reported causative genes or functionally supported new candidates, plus 30% families in which likely pathogenic or VGUS/VUS variants were identified in plausible candidates. Our results highlight the clinical utility of WES for molecular diagnosis of IRD, provide a wider spectrum of mutations and concomitant genetic variants, and challenge our view on syndromic vs non-syndromic, and causative vs modifier genes. PMID:28005958

  7. Molecular Typing of Enterobacteriaceae from Pig Holdings in North-Western Germany Reveals Extended- Spectrum and AmpC β-Lactamases Producing but no Carbapenem Resistant Ones

    PubMed Central

    Mellmann, Alexander; Frenzel, Julia; Friedrich, Alexander W.; Rossen, John W. A.

    2015-01-01

    The increase of extended- spectrum β-lactamase-producing Enterobacteriaceae (ESBL-E) in humans and in food-producing animals is of public health concern. The latter could contribute to spreading of these bacteria or their resistance genes to humans. Several studies have reported the isolation of third generation cephalosporin resistant bacteria in livestock animals. However, the number of samples and the methodology used differ considerably between studies limiting comparability and prevalence assessment. In the present study, a total of 564 manure and dust samples were collected from 47 pig farms in Northern Germany and analysed to determine the prevalence of ESBL-E. Molecular typing and characterization of resistance genes was performed for all ESBL-E isolates. ESBL-E isolates were found in 55.3% of the farms. ESBL-Escherichia coli was found in 18.8% of the samples, ESBL-Klebsiella pneumoniae in 0.35%. The most prevalent ESBL genes among E. coli were CTX-M-1 like (68.9%), CTX-M-15 like (16%) and CTX-M-9 group (14.2%). In 20% of the latter two, also the OXA-1 like gene was found resulting in a combination of genes typical for isolates from humans. Genetic relation was found between isolates not only from the same, but also from different farms, with multilocus sequence type (ST) 10 being predominant among the E. coli isolates. In conclusion, we showed possible spread of ESBL-E between farms and the presence of resistance genes and STs previously shown to be associated with human isolates. Follow-up studies are required to monitor the extent and pathways of ESBL-E transmission between farms, animals and humans. PMID:26225428

  8. Zellweger Spectrum

    MedlinePlus

    ... Resources Conference News Contact Us Donate The Zellweger Spectrum Zellweger Syndrome, Neonatal Adrenoleukodystrophy (NALD), and Infantile Refsum’s ... of severity of disease. What causes the Zellweger spectrum of diseases? As we mentioned, disorders of the ...

  9. The shell spectrum of HD 94509

    NASA Astrophysics Data System (ADS)

    Cowley, Charles R.; Przybilla, Norbert; Hubrig, Swetlana

    2015-01-01

    HD 94509 is a 9th magnitude Be star with an unusually rich metallic-lined shell. The absorption spectrum is rich, comparable to that of an A or F supergiant, but Mg II (4481A), and the Si II (4128 and 4130A), are weak, indicating a dilute radiation field, as described by Otto Struve. The H-alpha emission is double with components of equal intensity and an absorption core that dips well below the stellar continuum. H-beta is weaker, but with a similar structure. H-gamma through H-epsilon have virtually black cores, indicating that the shell covers the stellar disk. The stronger metallic absorption lines are wide near the continuum, but taper to very narrow cores. This line shape is unexplained. However, the total absorption can be modeled to reveal an overall particle densities of 10^{10}-10^{12} cm^{-3}. An electron density log(n_e) = 11.2 is obtained from the Paschen-line convergence and the Inglis-Tellar relation. Column densities are obtained with the help of curves of growth by assuming uniform conditions in the cloud. These indicate a nearly solar composition. The CLOUDY code (Ferland, et al. Rev. Mex. Astron. Astroph. 49, 137, 213) is used to produce a model that predicts matching column densities of the dominant ions, the n = 3 level of hydrogen, the H-alpha strength, and the electron density (± 0.5 dex).

  10. The First Spectrum of the Coldest Brown Dwarf

    NASA Astrophysics Data System (ADS)

    Skemer, Andrew J.; Morley, Caroline V.; Allers, Katelyn N.; Geballe, Thomas R.; Marley, Mark S.; Fortney, Jonathan J.; Faherty, Jacqueline K.; Bjoraker, Gordon L.; Lupu, Roxana

    2016-08-01

    The recently discovered brown dwarf WISE 0855 presents the first opportunity to directly study an object outside the solar system that is nearly as cold as our own gas giant planets. However, the traditional methodology for characterizing brown dwarfs—near-infrared spectroscopy—is not currently feasible, as WISE 0855 is too cold and faint. To characterize this frozen extrasolar world we obtained a 4.5-5.2 μm spectrum, the same bandpass long used to study Jupiter’s deep thermal emission. Our spectrum reveals the presence of atmospheric water vapor and clouds, with an absorption profile that is strikingly similar to Jupiter’s. The spectrum quality is high enough to allow for the investigation of dynamical and chemical processes that have long been studied in Jupiter’s atmosphere, but now on an extrasolar world.

  11. PERITONEAL ABSORPTION

    PubMed Central

    Hahn, P. F.; Miller, L. L.; Robscheit-Robbins, F. S.; Bale, W. F.; Whipple, G. H.

    1944-01-01

    The absorption of red cells from the normal peritoneum of the dog can be demonstrated by means of red cells labeled with radio-iron incorporated in the hemoglobin of these red cells. Absorption in normal dogs runs from 20 to 100 per cent of the amount given within 24 hours. Dogs rendered anemic by bleeding absorb red cells a little less rapidly—ranging from 5 to 80 per cent of the injected red cells. Doubly depleted dogs (anemic and hypoproteinemic) absorb even less in the three experiments recorded. This peritoneal absorption varies widely in different dogs and even in the same dog at different times. We do not know the factors responsible for these variations but there is no question about active peritoneal absorption. The intact red cells pass readily from the peritoneal cavity into lymph spaces in diaphragm and other areas of the peritoneum. The red cells move along the lymphatics and through the lymph glands with little or no phagocytosis and eventually into the large veins through the thoracic ducts. PMID:19871404

  12. Nutrient absorption.

    PubMed

    Rubin, Deborah C

    2004-03-01

    Our understanding of nutrient absorption continues to grow, from the development of unique animal models and from studies in which cutting-edge molecular and cellular biologic approaches have been used to analyze the structure and function of relevant molecules. Studies of the molecular genetics of inherited disorders have also provided many new insights into these processes. A major advance in lipid absorption has been the cloning and characterization of several intestinal acyl CoA:monoacylglycerol acyltransferases; these may provide new targets for antiobesity drug therapy. Studies of intestinal cholesterol absorption and reverse cholesterol transport have encouraged the development of novel potential treatments for hyperlipidemia. Observations in genetically modified mice and in humans with mutations in glucose transporter 2 suggest the importance of a separate microsomal membrane transport pathway for glucose transport. The study of iron metabolism has advanced greatly with the identification of the hemochromatosis gene and the continued examination of the genetic regulation of iron absorptive pathways. Several human thiamine transporters have been identified, and their specific roles in different tissues are being explored.

  13. Spectrum Recombination.

    ERIC Educational Resources Information Center

    Greenslade, Thomas B., Jr.

    1984-01-01

    Describes several methods of executing lecture demonstrations involving the recombination of the spectrum. Groups the techniques into two general classes: bringing selected portions of the spectrum together using lenses or mirrors and blurring the colors by rapid movement or foreshortening. (JM)

  14. Absorption Mode FT-ICR Mass Spectrometry Imaging

    SciTech Connect

    Smith, Donald F.; Kilgour, David P.; Konijnenburg, Marco; O'Connor, Peter B.; Heeren, Ronald M.

    2013-12-03

    Fourier transform ion cyclotron resonance mass spectrometry offers the highest mass resolving power for molecular imaging experiments. This high mass resolving power ensures that closely spaced peaks at the same nominal mass are resolved for proper image generation. Typically higher magnetic fields are used to increase mass resolving power. However, a gain in mass resolving power can also be realized by phase correction of the data for absorption mode display. In addition to mass resolving power, absorption mode offers higher mass accuracy and signal-to-noise ratio over the conventional magnitude mode. Here we present the first use of absorption mode for Fourier transform ion cyclotron resonance mass spectrometry imaging. The Autophaser algorithm is used to phase correct each spectrum (pixel) in the image and then these parameters are used by the Chameleon work-flow based data processing software to generate absorption mode ?Datacubes? for image and spectral viewing. Absorption mode reveals new mass and spatial features that are not resolved in magnitude mode and results in improved selected ion image contrast.

  15. Global methylation profiling of lymphoblastoid cell lines reveals epigenetic contributions to autism spectrum disorders and a novel autism candidate gene, RORA, whose protein product is reduced in autistic brain.

    PubMed

    Nguyen, AnhThu; Rauch, Tibor A; Pfeifer, Gerd P; Hu, Valerie W

    2010-08-01

    Autism is currently considered a multigene disorder with epigenetic influences. To investigate the contribution of DNA methylation to autism spectrum disorders, we have recently completed large-scale methylation profiling by CpG island microarray analysis of lymphoblastoid cell lines derived from monozygotic twins discordant for diagnosis of autism and their nonautistic siblings. Methylation profiling revealed many candidate genes differentially methylated between discordant MZ twins as well as between both twins and nonautistic siblings. Bioinformatics analysis of the differentially methylated genes demonstrated enrichment for high-level functions including gene transcription, nervous system development, cell death/survival, and other biological processes implicated in autism. The methylation status of 2 of these candidate genes, BCL-2 and retinoic acid-related orphan receptor alpha (RORA), was further confirmed by bisulfite sequencing and methylation-specific PCR, respectively. Immunohistochemical analyses of tissue arrays containing slices of the cerebellum and frontal cortex of autistic and age- and sex-matched control subjects revealed decreased expression of RORA and BCL-2 proteins in the autistic brain. Our data thus confirm the role of epigenetic regulation of gene expression via differential DNA methylation in idiopathic autism, and furthermore link molecular changes in a peripheral cell model with brain pathobiology in autism.

  16. Optical absorption of sodium copper chlorophyllin thin films in UV-vis-NIR region.

    PubMed

    Farag, A A M

    2006-11-01

    The optical absorption studies of sodium copper chlorophyllin thin films (SCC), prepared by spray pyrolysis, in the UV-vis-NIR region was reported for the first time. Several new discrete transitions are observed in the UV-vis region of the spectra in addition to a strong continuum component in the IR region. The spectra of the infrared absorption allow characterization of vibration modes for the powder and thin films of SCC. The absorption spectrum recorded in the UV-vis region showed different absorption bands, namely the Soret (B) in the region 340-450 nm and Q-band in the region 600-700 nm and other band labeled N in the 240-320 region. Some important spectral parameters namely optical absorption coefficient (alpha), molar extinction coefficient (epsilon(molar)), oscillator strength (f), electric dipole strength (q(2)) and absorption half bandwidth (Deltalambda) of the principle optical transitions were evaluated. The analysis of the absorption coefficient in the absorption region revealed direct transitions and the energy gap was estimated as 1.63 eV. Discussion of the obtained results and their comparison with the previous published data are also given.

  17. Magneto-absorption in conical quantum dot ensemble: Possible applications for QD LED

    NASA Astrophysics Data System (ADS)

    Hayrapetyan, D. B.; Kazaryan, E. M.; Sarkisyan, H. A.

    2016-07-01

    In the framework of the adiabatic approximation, the energy states of electron, as well as the direct light absorption are investigated in conical quantum dot under the external magnetic field. Analytical expressions for the particle wave function and energy spectrum are obtained. The dependence of the absorption edge on the geometrical parameters of conical quantum dot is obtained. Selection rules are revealed for transitions between levels with different quantum numbers. Absorption coefficient dependence on the frequency of the incident light is revealed taking into account dispersion of conical quantum dot's base radius for both cases of symmetric and asymmetric distribution functions. Such structures are very promising and can be used for the element base quantum dots LEDs.

  18. Energy Spectrum and Optical Absorption Spectra of Fullerene C76 Isomers and Endohedral Metal Complexes on Their Basis Within the Limits of the Concept of a Strongly Correlated State

    NASA Astrophysics Data System (ADS)

    Lebedev, Yu. A.; Lobanov, B. V.; Murzashev, A. I.

    2016-11-01

    The energy spectra of five fullerene C76 isomers are calculated for the Hubbard model in the static fluctuation approximation. Based on the spectra obtained, the optical absorption spectra of pure fullerene C76 represented by the isomer of symmetry D2 and endohedral Lu2@C76, Sm@C76, and DySc2N@C76 metal complexes are calculated. The calculated optical absorption spectra agree qualitatively well with the available experimental data, thereby indicating a need to consider the strong Coulomb interactions in the study of the π-electron fullerene subsystem.

  19. Photoionization-driven Absorption-line Variability in Balmer Absorption Line Quasar LBQS 1206+1052

    NASA Astrophysics Data System (ADS)

    Sun, Luming; Zhou, Hongyan; Ji, Tuo; Jiang, Peng; Liu, Bo; Liu, Wenjuan; Pan, Xiang; Shi, Xiheng; Wang, Jianguo; Wang, Tinggui; Yang, Chenwei; Zhang, Shaohua; Miller, Lauren P.

    2017-04-01

    In this paper we present an analysis of absorption-line variability in mini-BAL quasar LBQS 1206+1052. The Sloan Digital Sky Survey spectrum demonstrates that the absorption troughs can be divided into two components of blueshift velocities of ∼700 and ∼1400 km s‑1 relative to the quasar rest frame. The former component shows rare Balmer absorption, which is an indicator of high-density absorbing gas; thus, the quasar is worth follow-up spectroscopic observations. Our follow-up optical and near-infrared spectra using MMT, YFOSC, TSpec, and DBSP reveal that the strengths of the absorption lines vary for both components, while the velocities do not change. We reproduce all of the spectral data by assuming that only the ionization state of the absorbing gas is variable and that all other physical properties are invariable. The variation of ionization is consistent with the variation of optical continuum from the V-band light curve. Additionally, we cannot interpret the data by assuming that the variability is due to a movement of the absorbing gas. Therefore, our analysis strongly indicates that the absorption-line variability in LBQS 1206+1052 is photoionization driven. As shown from photoionization simulations, the absorbing gas with blueshift velocity of ∼700 km s‑1 has a density in the range of 109 to 1010 cm‑3 and a distance of ∼1 pc, and the gas with blueshift velocity of ∼1400 km s‑1 has a density of 103 cm‑3 and a distance of ∼1 kpc.

  20. Relic Neutrino Absorption Spectroscopy

    SciTech Connect

    Eberle, b

    2004-01-28

    Resonant annihilation of extremely high-energy cosmic neutrinos on big-bang relic anti-neutrinos (and vice versa) into Z-bosons leads to sizable absorption dips in the neutrino flux to be observed at Earth. The high-energy edges of these dips are fixed, via the resonance energies, by the neutrino masses alone. Their depths are determined by the cosmic neutrino background density, by the cosmological parameters determining the expansion rate of the universe, and by the large redshift history of the cosmic neutrino sources. We investigate the possibility of determining the existence of the cosmic neutrino background within the next decade from a measurement of these absorption dips in the neutrino flux. As a by-product, we study the prospects to infer the absolute neutrino mass scale. We find that, with the presently planned neutrino detectors (ANITA, Auger, EUSO, OWL, RICE, and SalSA) operating in the relevant energy regime above 10{sup 21} eV, relic neutrino absorption spectroscopy becomes a realistic possibility. It requires, however, the existence of extremely powerful neutrino sources, which should be opaque to nucleons and high-energy photons to evade present constraints. Furthermore, the neutrino mass spectrum must be quasi-degenerate to optimize the dip, which implies m{sub {nu}} 0.1 eV for the lightest neutrino. With a second generation of neutrino detectors, these demanding requirements can be relaxed considerably.

  1. The 4-8 micron spectrum of the infrared source W33 A

    NASA Technical Reports Server (NTRS)

    Soifer, B. T.; Puetter, R. C.; Russell, R. W.; Willner, S. P.; Harvey, P. M.; Gillett, F. C.

    1979-01-01

    The spectrum of the highly obscured infrared source W33 A from 4.5 to 8 microns is measured in order to investigate the intervening cold, dense interstellar material. Spectrophotometry at a relative spectral resolution of about 0.015 by an airborne filter-wheel infrared spectrometer reveals strong absorption features at 4.61, 5.99 and 6.78 microns. The absorption at 4.61 microns is attributed primarily to the fundamental vibration-rotation band of CO at a column density (at least 10 to the 19th/sq cm) which is 10% of the carbon inferred from silicate abundances. The strengths and line widths of the absorption agt 5.99 and 6.78 microns are interpreted as evidence of absorption in the resonance bands of carbonyl, carbon-carbon double, methyl and methylene bonds of hydrocarbons associated with interstellar dust.

  2. Reinvestigation of the triplet-minus-singlet spectrum of chloroplasts

    NASA Astrophysics Data System (ADS)

    Jávorfi, T.; Garab, G.; Razi Naqvi, K.

    2000-01-01

    A comparison of the triplet-minus-singlet (TmS) absorption spectrum of spinach chloroplasts, recorded some thirty years ago, with the more recently published TmS spectrum of isolated Chl a/ b LHCII (light-harvesting complexes associated with photosystem II of higher plants) shows that the two spectra are very similar, which is to be expected, since only the carotenoid pigments contribute to each spectrum. Be that as it may, the comparison also reveals a dissimilarity: photoexcitation of the sample does, or does not, affect the absorbance in the Qy region (650-700 nm), depending on whether the sample is a suspension of chloroplasts or of isolated LHCII. The Qy-signal in the TmS spectrum of LHCII decays, it should be noted, at the same rate as the rest of the difference spectrum, and its most prominent feature is a negative peak. As the carotenoids do not absorb in the Qy region, the presence of a signal in this region calls for an explanation: van der Vos, Carbonera and Hoff, the first to find as well as fathom the phenomenon, attributed the Qy-signal to a change, in the absorption spectrum of a chlorophyll a (Chl a) molecule, brought about by the presence of triplet excitation on a neighbouring carotenoid (Car). The difference in the behaviours of chloroplasts and LHCII, if reproducible, would imply that the Car triplets which give rise to the TmS spectrum of chloroplasts do not influence the absorption spectra of their Chl a neighbours. With a view to reaching a firm conclusion about this vexed issue, spinach chloroplasts and thylakoids have been examined with the aid of the same kinetic spectrometer as that used for investigating LHCII; the TmS spectra of both chloroplasts and thylakoids contain prominent bleaching signals centred at 680 nm, and the triplet decay time in each case is comparable to that of the Chl a/ b LHCII triplets. Results pertaining to other closely related systems are recalled, and it is concluded that, so far as the overall appearance of the

  3. Energy absorption of refractory absorber with periodic nanostructures

    NASA Astrophysics Data System (ADS)

    Kang, Yuchen; Yang, Shuhan; Wang, Yanhong; Wu, Jingzhi

    2016-10-01

    Refractory material with surface plasmonic structures have the function of spectrum selective absorption and radiation spectrum regulation. In this paper, we design an absorber with periodic cylindrical nanostructures and a dielectric layer of Al2O3 based on the substrate of metal Tantalum (Ta). The energy absorption characteristics of the absorber have been simulated and analyzed by changing various constructional parameters. The simulation results indicate that structural parameters have great influence on the spectrum absorption in the range of wavelength 400-4000nm. The period and radius of nanostructure have a important effect on the absorption peaks in the infrared region. Infrared absorption peak can reach more than 99% and produce a red shift due to parameters changing. At the whole visible field, the absorption enhancement effect is significant. The refractive index and thickness of dielectric layer also have an obviously effect on the absorption spectrum. Furthermore, it is also obviously that thickness of dielectric layer has enhancement effect on absorption of infrared spectrum. The research found that the absorption and radiation spectrum of surface plasmonic materials can be effectively controlled by combining the high temperature radiation characteristics of high temperature metal. Thermophotovoltaic system can provide a kind of new methods and ideas for improving conversion efficiency, energy saving and consumption reducing.

  4. Large-Scale Fusion of Gray Matter and Resting-State Functional MRI Reveals Common and Distinct Biological Markers across the Psychosis Spectrum in the B-SNIP Cohort

    PubMed Central

    Wang, Zheng; Meda, Shashwath A.; Keshavan, Matcheri S.; Tamminga, Carol A.; Sweeney, John A.; Clementz, Brett A.; Schretlen, David J.; Calhoun, Vince D.; Lui, Su; Pearlson, Godfrey D.

    2015-01-01

    To investigate whether aberrant interactions between brain structure and function present similarly or differently across probands with psychotic illnesses [schizophrenia (SZ), schizoaffective disorder (SAD), and bipolar I disorder with psychosis (BP)] and whether these deficits are shared with their first-degree non-psychotic relatives. A total of 1199 subjects were assessed, including 220 SZ, 147 SAD, 180 psychotic BP, 150 first-degree relatives of SZ, 126 SAD relatives, 134 BP relatives, and 242 healthy controls (1). All subjects underwent structural MRI (sMRI) and resting-state functional MRI (rs-fMRI) scanning. Joint-independent component analysis (jICA) was used to fuse sMRI gray matter and rs-fMRI amplitude of low-frequency fluctuations data to identify the relationship between the two modalities. jICA revealed two significantly fused components. The association between functional brain alteration in a prefrontal–striatal–thalamic–cerebellar network and structural abnormalities in the default mode network was found to be common across psychotic diagnoses and correlated with cognitive function, social function, and schizo-bipolar scale scores. The fused alteration in the temporal lobe was unique to SZ and SAD. The above effects were not seen in any relative group (including those with cluster-A personality). Using a multivariate-fused approach involving two widely used imaging markers, we demonstrate both shared and distinct biological traits across the psychosis spectrum. Furthermore, our results suggest that the above traits are psychosis biomarkers rather than endophenotypes. PMID:26732139

  5. ABSORPTION ANALYZER

    DOEpatents

    Brooksbank, W.A. Jr.; Leddicotte, G.W.; Strain, J.E.; Hendon, H.H. Jr.

    1961-11-14

    A means was developed for continuously computing and indicating the isotopic assay of a process solution and for automatically controlling the process output of isotope separation equipment to provide a continuous output of the desired isotopic ratio. A counter tube is surrounded with a sample to be analyzed so that the tube is exactly in the center of the sample. A source of fast neutrons is provided and is spaced from the sample. The neutrons from the source are thermalized by causing them to pass through a neutron moderator, and the neutrons are allowed to diffuse radially through the sample to actuate the counter. A reference counter in a known sample of pure solvent is also actuated by the thermal neutrons from the neutron source. The number of neutrons which actuate the detectors is a function of a concentration of the elements in solution and their neutron absorption cross sections. The pulses produced by the detectors responsive to each neu tron passing therethrough are amplified and counted. The respective times required to accumulate a selected number of counts are measured by associated timing devices. The concentration of a particular element in solution may be determined by utilizing the following relation: T2/Ti = BCR, where B is a constant proportional to the absorption cross sections, T2 is the time of count collection for the unknown solution, Ti is the time of count collection for the pure solvent, R is the isotopic ratlo, and C is the molar concentration of the element to be determined. Knowing the slope constant B for any element and when the chemical concentration is known, the isotopic concentration may be readily determined, and conversely when the isotopic ratio is known, the chemical concentrations may be determined. (AEC)

  6. Reflective-tube absorption meter

    NASA Astrophysics Data System (ADS)

    Zaneveld, J. Ronald V.; Bartz, Robert; Kitchen, James C.

    1990-09-01

    The design and calibration of a proposed in situ spectral absorption meter is evaluated using a laboratory prototype. The design includes a silver coated (second-surface) glass tube, a tungsten light source (stabilized by means of optical feedback), a monochromator, and a solid state detector. The device measures the absorption coefficient plus a portion of the volume scattering function. Theoretical analyses and laboratory experiments which explore the magnitude and variation of the errors due to scattering and internal reflections are described. Similar analyses are performed on the Cary 1 18 Spectrophotometer to allow cross calibration. Algorithms to yield the abscrption coefficient and the zenith-sun diffuse attenuation coefficient are presented and evaluated. Simultaneous measurement of the beam attenuation or backscattering coefficient allows use of algoriThms with much narrower error bands. The various methods of obtaining absorption and diffuse attenuation values are compared. Procedures for using reverse osmosis filtration to produce a clean water calibration standard are described. An absorption spectrum for pure water is obtained. Development of the absorption meter is proceeding along two lines: 1) a two-wavelength side-by-side LED is being fabricated to allow an in situ chlorophyll a absorption meter to be constructed, and 2) scientific projects using a shipboard or laboratory flow.-through pumping system are being planned.

  7. Discovery of Broad Soft X-ray Absorption Lines from the Quasar Wind in PDS 456

    NASA Astrophysics Data System (ADS)

    Reeves, J. N.; Braito, V.; Nardini, E.; Behar, E.; O'Brien, P. T.; Tombesi, F.; Turner, T. J.; Costa, M. T.

    2016-06-01

    High-resolution soft X-ray spectroscopy of the prototype accretion disk wind quasar, PDS 456, is presented. Here, the XMM-Newton reflection grating spectrometer spectra are analyzed from the large 2013-2014 XMM-Newton campaign, consisting of five observations of approximately 100 ks in length. During the last observation (OBS. E), the quasar is at a minimum flux level, and broad absorption line (BAL) profiles are revealed in the soft X-ray band, with typical velocity widths of {σ }{{v}}˜ {{10,000}} km s-1. During a period of higher flux in the third and fourth observations (OBS. C and D, respectively), a very broad absorption trough is also present above 1 keV. From fitting the absorption lines with models of photoionized absorption spectra, the inferred outflow velocities lie in the range ˜ 0.1{--}0.2c. The absorption lines likely originate from He and H-like neon and L-shell iron at these energies. A comparison with earlier archival data of PDS 456 also reveals a similar absorption structure near 1 keV in a 40 ks observation in 2001, and generally the absorption lines appear most apparent when the spectrum is more absorbed overall. The presence of the soft X-ray BALs is also independently confirmed by an analysis of the XMM-Newton EPIC spectra below 2 keV. We suggest that the soft X-ray absorption profiles could be associated with a lower ionization and possibly clumpy phase of the accretion disk wind, where the latter is known to be present in this quasar from its well-studied iron K absorption profile and where the wind velocity reaches a typical value of 0.3c.

  8. Slow light and saturable absorption

    NASA Astrophysics Data System (ADS)

    Selden, A. C.

    2009-06-01

    Quantitative analysis of slow light experiments utilising coherent population oscillation (CPO) in a range of saturably absorbing media, including ruby and alexandrite, Er3+:Y2SiO5, bacteriorhodopsin, semiconductor quantum devices and erbium-doped optical fibres, shows that the observations may be more simply interpreted as saturable absorption phenomena. A basic two-level model of a saturable absorber displays all the effects normally associated with slow light, namely phase shift and modulation gain of the transmitted signal, hole burning in the modulation frequency spectrum and power broadening of the spectral hole, each arising from the finite response time of the non-linear absorption. Only where hole-burning in the optical spectrum is observed (using independent pump and probe beams), or pulse delays exceeding the limits set by saturable absorption are obtained, can reasonable confidence be placed in the observation of slow light in such experiments. Superluminal (“fast light”) phenomena in media with reverse saturable absorption (RSA) may be similarly explained.

  9. A mixed quantum-classical molecular dynamics study of anti-tetrol and syn-tetrol dissolved in liquid chloroform: hydrogen-bond structure and its signature on the infrared absorption spectrum.

    PubMed

    Kwac, Kijeong; Geva, Eitan

    2013-12-27

    The intramolecular hydrogen-bond structure of stereoselectively synthesized syn-tetrol and anti-tetrol dissolved in deuterated chloroform is investigated via a mixed quantum-classical molecular dynamics simulation. An extensive conformational analysis is performed in order to determine the dominant conformations, the distributions among them, and their sensitivity to the method for assigning partial charges (RESP vs AM1-BCC). The signature of the conformational distribution and method of assigning partial charges on the infrared absorption spectra is analyzed in detail. The relationship between the spectra and the underlying hydrogen-bond structure is elucidated.

  10. Protonation State of MnFe and FeFe Cofactors in a Ligand-Binding Oxidase Revealed by X-ray Absorption, Emission, and Vibrational Spectroscopy and QM/MM Calculations.

    PubMed

    Kositzki, Ramona; Mebs, Stefan; Marx, Jennifer; Griese, Julia J; Schuth, Nils; Högbom, Martin; Schünemann, Volker; Haumann, Michael

    2016-10-03

    Enzymes with a dimetal-carboxylate cofactor catalyze reactions among the top challenges in chemistry such as methane and dioxygen (O2) activation. Recently described proteins bind a manganese-iron cofactor (MnFe) instead of the classical diiron cofactor (FeFe). Determination of atomic-level differences of homo- versus hetero-bimetallic cofactors is crucial to understand their diverse redox reactions. We studied a ligand-binding oxidase from the bacterium Geobacillus kaustophilus (R2lox) loaded with a FeFe or MnFe cofactor, which catalyzes O2 reduction and an unusual tyrosine-valine ether cross-link formation, as revealed by X-ray crystallography. Advanced X-ray absorption, emission, and vibrational spectroscopy methods and quantum chemical and molecular mechanics calculations provided relative Mn/Fe contents, X-ray photoreduction kinetics, metal-ligand bond lengths, metal-metal distances, metal oxidation states, spin configurations, valence-level degeneracy, molecular orbital composition, nuclear quadrupole splitting energies, and vibrational normal modes for both cofactors. A protonation state with an axial water (H2O) ligand at Mn or Fe in binding site 1 and a metal-bridging hydroxo group (μOH) in a hydrogen-bonded network is assigned. Our comprehensive picture of the molecular, electronic, and dynamic properties of the cofactors highlights reorientation of the unique axis along the Mn-OH2 bond for the Mn1(III) Jahn-Teller ion but along the Fe-μOH bond for the octahedral Fe1(III). This likely corresponds to a more positive redox potential of the Mn(III)Fe(III) cofactor and higher proton affinity of its μOH group. Refined model structures for the Mn(III)Fe(III) and Fe(III)Fe(III) cofactors are presented. Implications of our findings for the site-specific metalation of R2lox and performance of the O2 reduction and cross-link formation reactions are discussed.

  11. Metamaterial with electromagnetic transparency under multiband absorptions

    NASA Astrophysics Data System (ADS)

    Zhang, Xu; Qi, Limei

    2017-02-01

    We propose a metal-dielectric-metal (MDM) metamaterial that has an electromagnetic (EM) transparency spectrum under multiband absorptions in the C and the X bands. The ground continuous metal film used in the conventional metamaterial absorber (MA) is replaced by a structured ground plane (SGP) in our design. The band-pass properties of the front patterned metal film and the SGP determine the EM transparency spectrum, while the magnetic and the electric resonances in the MDM structure contribute to the multiband absorptions. Due to the symmetric structure of the unit cell, the absorption bands and the EM transparency spectrum of the metamaterial have the property of polarization independency. Despite the normal incidence, the metamaterial can also be used for non-normal incidence.

  12. Decays of the Three Top Contributors to the Reactor ν[over ¯]_{e} High-Energy Spectrum, ^{92}Rb, ^{96gs}Y, and ^{142}Cs, Studied with Total Absorption Spectroscopy.

    PubMed

    Rasco, B C; Wolińska-Cichocka, M; Fijałkowska, A; Rykaczewski, K P; Karny, M; Grzywacz, R K; Goetz, K C; Gross, C J; Stracener, D W; Zganjar, E F; Batchelder, J C; Blackmon, J C; Brewer, N T; Go, S; Heffron, B; King, T; Matta, J T; Miernik, K; Nesaraja, C D; Paulauskas, S V; Rajabali, M M; Wang, E H; Winger, J A; Xiao, Y; Zachary, C J

    2016-08-26

    We report total absorption spectroscopy measurements of ^{92}Rb, ^{96gs}Y, and ^{142}Cs β decays, which are the most important contributors to the high energy ν[over ¯]_{e} spectral shape in nuclear reactors. These three β decays contribute 43% of the ν[over ¯]_{e} flux near 5.5 MeV emitted by nuclear reactors. This ν[over ¯]_{e} energy is particularly interesting due to spectral features recently observed in several experiments including the Daya Bay, Double Chooz, and RENO Collaborations. Measurements were conducted at Oak Ridge National Laboratory by means of proton-induced fission of ^{238}U with on-line mass separation of fission fragments and the Modular Total Absorption Spectrometer. We observe a β-decay pattern that is similar to recent measurements of ^{92}Rb, with a ground-state to ground-state β feeding of 91(3)%. We verify the ^{96gs}Y ground-state to ground-state β feeding of 95.5(20)%. Our measurements substantially modify the β-decay feedings of ^{142}Cs, reducing the β feeding to ^{142}Ba states below 2 MeV by 32% when compared with the latest evaluations. Our results increase the discrepancy between the observed and the expected reactor ν[over ¯]_{e} flux between 5 and 7 MeV, the maximum excess increases from ∼10% to ∼12%.

  13. Decays of the Three Top Contributors to the Reactor ν¯e High-Energy Spectrum, 92Rb, Ygs96 , and 142Cs, Studied with Total Absorption Spectroscopy

    NASA Astrophysics Data System (ADS)

    Rasco, B. C.; Wolińska-Cichocka, M.; Fijałkowska, A.; Rykaczewski, K. P.; Karny, M.; Grzywacz, R. K.; Goetz, K. C.; Gross, C. J.; Stracener, D. W.; Zganjar, E. F.; Batchelder, J. C.; Blackmon, J. C.; Brewer, N. T.; Go, S.; Heffron, B.; King, T.; Matta, J. T.; Miernik, K.; Nesaraja, C. D.; Paulauskas, S. V.; Rajabali, M. M.; Wang, E. H.; Winger, J. A.; Xiao, Y.; Zachary, C. J.

    2016-08-01

    We report total absorption spectroscopy measurements of 92Rb, Ygs96 , and 142Cs β decays, which are the most important contributors to the high energy ν¯e spectral shape in nuclear reactors. These three β decays contribute 43% of the ν¯e flux near 5.5 MeV emitted by nuclear reactors. This ν¯e energy is particularly interesting due to spectral features recently observed in several experiments including the Daya Bay, Double Chooz, and RENO Collaborations. Measurements were conducted at Oak Ridge National Laboratory by means of proton-induced fission of 238U with on-line mass separation of fission fragments and the Modular Total Absorption Spectrometer. We observe a β -decay pattern that is similar to recent measurements of 92Rb, with a ground-state to ground-state β feeding of 91(3)%. We verify the Ygs96 ground-state to ground-state β feeding of 95.5(20)%. Our measurements substantially modify the β -decay feedings of 142Cs, reducing the β feeding to 142Ba states below 2 MeV by 32% when compared with the latest evaluations. Our results increase the discrepancy between the observed and the expected reactor ν¯e flux between 5 and 7 MeV, the maximum excess increases from ˜10 % to ˜12 %.

  14. Molar Absorptivity Measurements in Absorbing Solvents: Impact on Solvent Absorptivity Values.

    PubMed

    Bohman, Ariel; Arnold, Mark A

    2016-10-18

    Molar absorptivity is a fundamental molecular property that quantifies absorption strength as a function of wavelength. Absolute measurements of molar absorptivity demand accounting for all mechanisms of light attenuation, including reflective losses at interfaces associated with the sample. Ideally, such measurements are performed in nonabsorbing solvents and reflective losses can be determined in a straightforward manner from Fresnel equations or effectively accounted for by path length difference methods. At near-infrared wavelengths, however, many solvents, including water, are absorbing which complicates the quantification of reflective losses. Here, generalized equations are developed for calculating absolute molar absorptivities of neat liquids wherein the dependency of reflective loss on absorption properties of the liquid are considered explicitly. The resulting equations are used to characterize sensitivity of absolute molar absorptivity measurements for solvents to the absorption strength of the solvent as well as the path length of the measurement. Methods are derived from these equations to properly account for reflective losses in general and the effectiveness of these methods is demonstrated for absolute molar absorptivity measurements for water over the combination region (5000-4000 cm(-1)) of the near-infrared spectrum. Results indicate that ignoring solvent absorption effects can incorporate wide ranging systematic errors depending upon experimental conditions. As an example, systematic errors range from 0 to 10% for common conditions used in the measurement of absolute molar absorptivity of water over the combination region of the near-infrared spectrum.

  15. Experimental studies of a zeeman-tuned xenon laser differential absorption apparatus.

    PubMed

    Linford, G J

    1973-06-01

    A Zeeman-tuned cw xenon laser differential absorption device is described. The xenon laser was tuned by axial magnetic fields up to 5500 G generated by an unusually large water-cooled dc solenoid. Xenon laser lines at 3.37 micro, 3.51 micro, and 3.99 micro were tuned over ranges of 6 A, 6 A, and 11 A, respectively. To date, this apparatus has been used principally to study the details of formaldehyde absorption lines lying near the 3 .508-micro xenon laser transition. These experiments revealed that the observed absorption spectrum of formaldehyde exhibits a sufficiently unique spectral structure that the present technique may readily be used to measure relative concentrations of formaldehyde in samples of polluted air.

  16. Associated C IV absorption in radio-loud QSOs - The 3C mini-survey

    SciTech Connect

    Anderson, S.F.; Weymann, R.J.; Foltz, C.B.; Chaffee, F.H. Jr.

    1987-08-01

    A spectroscopic survey at 1 A resolution of twelve 3C and 3CR QSOs reveals a very high incidence of C IV absorption complexes within + or - 5000 km/s of the C IV 1548, 1550-A emission-line redshift. Such associated C IV absorption is found to be strong (rest-frame equivalent width equal to or greater than 1.5 A) in six of these powerful, steep-spectrum radio sources, while four others show weaker associated absorption. Such strong associated C IV complexes with z(abs) approximaely equal to z(em) are comparatively rare in a sample of radio-quiet QSOs investigated previously. The evidence for possible correlations with various radio properties is briefly discussed, although no correlations are thus far confirmed to be statistically significant. 29 references.

  17. Optical Absorption Spectra of Hydrous Wadsleyite to 32 GPa

    NASA Astrophysics Data System (ADS)

    Thomas, S.; Goncharov, A. F.; Jacobsen, S. D.; Bina, C. R.; Frost, D. J.

    2009-05-01

    Optical absorption spectra of high-pressure minerals can be used as indirect tools to calculate radiative conductivity of the Earth's interior [e.g., 1]. Recent high-pressure studies show that e.g. ringwoodite, γ-(Mg,Fe)2SiO4, does not become opaque in the near infrared and visible region, as previously assumed, but remains transparent to 21.5 GPa [2]. Therefore, it has been concluded that radiative heat transfer does not necessarily become blocked at high pressures of the mantle and ferromagnesian minerals actually could contribute to the heat flow in the Earth's interior [2]. In this study we use gem-quality single-crystals of hydrous Fe-bearing wadsleyite, β-(Mg,Fe)2SiO4, that were synthesized at 18 GPa and 1400 °C in a multianvil apparatus. Crystals were analyzed by Mössbauer and Raman spectroscopy, electron microprobe analysis and single-crystal X-ray diffraction. For absorption measurements a double-polished 50 μm sized single-crystal of wadsleyite was loaded in a diamond-anvil cell with neon as pressure medium. Optical absorption spectra were recorded at ambient conditions as well as up to 32 GPa from 400 to 50000 cm-1. At ambient pressure the absorption spectrum reveals two broad bands at - 10000 cm-1 and -15000 cm-1, and an absorption edge in the visible-ultraviolet range. With increasing pressure the absorption spectrum changes, both bands continuously shift to higher frequencies as has been observed for ringwoodite [2], but is contrary to earlier presumptions for wadsleyite [3]. Here, we will discuss band assignment along with the influence of iron, compare our results to previous absorption studies of mantle materials [2], and analyze possible implications for radiative conductivity of the transition zone. References: [1] Goncharov et al. (2008), McGraw Yearbook Sci. Tech., 242-245. [2] Keppler & Smyth (2005), Am. Mineral., 90 1209-1212. [3] Ross (1997), Phys. Chem. Earth, 22 113-118.

  18. Observation of confinement effects through liner and nonlinear absorption spectroscopy in cuprous oxide

    NASA Astrophysics Data System (ADS)

    Sekhar, H.; Rakesh Kumar, Y.; Narayana Rao, D.

    2015-02-01

    Cuprous oxide nano clusters, micro cubes and micro particles were successfully synthesized by reducing copper (II) salt with ascorbic acid in the presence of sodium hydroxide via a co-precipitation method. The X-ray diffraction studies revealed the formation of pure single phase cubic. Raman spectrum shows the inevitable presence of CuO on the surface of the Cu2O powders which may have an impact on the stability of the phase. Transmission electron microscopy (TEM) data revealed that the morphology evolves from nanoclusters to micro cubes and micro particles by increasing the concentration of NaOH. Linear optical measurements show that the absorption peak maximum shifts towards red with changing morphology from nano clusters to micro cubes and micro particles. The nonlinear optical properties were studied using open aperture Z-scan technique with 532 nm, 6 ns laser pulses. Samples exhibited saturable as well as reverse saturable absorption. The results show that the transition from SA to RSA is ascribed to excited-state absorption (ESA) induced by two-photon absorption (TPA) process. Due to confinement effects (enhanced band gap) we observed enhanced nonlinear absorption coefficient (βeff) in the case of nano-clusters compared to their micro-cubes and micro-particles.

  19. On the role of spatial position of bridged oxygen atoms as surface passivants on the ground-state gap and photo-absorption spectrum of silicon nano-crystals

    SciTech Connect

    Nazemi, Sanaz; Soleimani, Ebrahim Asl; Pourfath, Mahdi E-mail: pourfath@iue.tuwien.ac.at

    2015-11-28

    Silicon nano-crystals (NCs) are potential candidates for enhancing and tuning optical properties of silicon for optoelectronic and photo-voltaic applications. Due to the high surface-to-volume ratio, however, optical properties of NC result from the interplay of quantum confinement and surface effects. In this work, we show that both the spatial position of surface terminants and their relative positions have strong effects on NC properties as well. This is accomplished by investigating the ground-state HOMO-LUMO band-gap, the photo-absorption spectra, and the localization and overlap of HOMO and LUMO orbital densities for prototype ∼1.2 nm Si{sub 32–x}H{sub 42–2x}O{sub x} hydrogenated silicon NC with bridged oxygen atoms as surface terminations. It is demonstrated that the surface passivation geometry significantly alters the localization center and thus the overlap of frontier molecular orbitals, which correspondingly modifies the electronic and optical properties of NC.

  20. Fission Spectrum

    DOE R&D Accomplishments Database

    Bloch, F.; Staub, H.

    1943-08-18

    Measurements of the spectrum of the fission neutrons of 25 are described, in which the energy of the neutrons is determined from the ionization produced by individual hydrogen recoils. The slow neutrons producing fission are obtained by slowing down the fast neutrons from the Be-D reaction of the Stanford cyclotron. In order to distinguish between fission neutrons and the remaining fast cyclotron neutrons both the cyclotron current and the pusle amplifier are modulated. A hollow neutron container, in which slow neutrons have a lifetime of about 2 milliseconds, avoids the use of large distances. This method results in much higher intensities than the usual modulation arrangement. The results show a continuous distribution of neutrons with a rather wide maximum at about 0.8 MV falling off to half of its maximum value at 2.0 MV. The total number of netrons is determined by comparison with the number of fission fragments. The result seems to indicate that only about 30% of the neutrons have energies below .8 MV. Various tests are described which were performed in order to rule out modification of the spectrum by inelastic scattering. Decl. May 4, 1951

  1. Negligible shift of 3Ag- potential in longer-chain carotenoids as revealed by a single persistent peak of 3Ag-→1Ag- stimulated emission followed by 3Ag-←1Ag- transient-absorption

    NASA Astrophysics Data System (ADS)

    Li, Chunyong; Miki, Takeshi; Kakitani, Yoshinori; Koyama, Yasushi; Nagae, Hiroyoshi

    2007-12-01

    Upon excitation of lycopene, anhydrorhodovibrin or spirilloxanthin to the 1Bu+(0) state, stimulated emission followed by transient-absorption was observed as a single peak with the 3Ag-(0) energy that had been determined by measurement of resonance-Raman excitation profiles. This observation was explained in terms of negligible shift of the 3Ag- potential, in reference to the 1Ag- potential, where only the 3Ag-(υ)→1Ag-(υ) emission and the 3Ag-(υ)←1Ag-(υ) absorption become allowed during the vibrational relaxation of υ = 2 → 1 → 0, starting from the 3Ag-(2) level generated by diabatic internal conversion from the 1Bu+(0) level, in anhydrorhodovibrin, for example.

  2. Water vapour absorption in the clear atmosphere of a Neptune-sized exoplanet.

    PubMed

    Fraine, Jonathan; Deming, Drake; Benneke, Bjorn; Knutson, Heather; Jordán, Andrés; Espinoza, Néstor; Madhusudhan, Nikku; Wilkins, Ashlee; Todorov, Kamen

    2014-09-25

    Transmission spectroscopy has so far detected atomic and molecular absorption in Jupiter-sized exoplanets, but intense efforts to measure molecular absorption in the atmospheres of smaller (Neptune-sized) planets during transits have revealed only featureless spectra. From this it was concluded that the majority of small, warm planets evolve to sustain atmospheres with high mean molecular weights (little hydrogen), opaque clouds or scattering hazes, reducing our ability to observe the composition of these atmospheres. Here we report observations of the transmission spectrum of the exoplanet HAT-P-11b (which has a radius about four times that of Earth) from the optical wavelength range to the infrared. We detected water vapour absorption at a wavelength of 1.4 micrometres. The amplitude of the water absorption (approximately 250 parts per million) indicates that the planetary atmosphere is predominantly clear down to an altitude corresponding to about 1 millibar, and sufficiently rich in hydrogen to have a large scale height (over which the atmospheric pressure varies by a factor of e). The spectrum is indicative of a planetary atmosphere in which the abundance of heavy elements is no greater than about 700 times the solar value. This is in good agreement with the core-accretion theory of planet formation, in which a gas giant planet acquires its atmosphere by accreting hydrogen-rich gas directly from the protoplanetary nebula onto a large rocky or icy core.

  3. Evidence for active galactic nucleus feedback in the broad absorption lines and reddening of MRK 231 {sup ,}

    SciTech Connect

    Leighly, Karen M.; Baron, Eddie; Lucy, Adrian B.; Terndrup, Donald M.; Dietrich, Matthias; Gallagher, Sarah C.

    2014-06-20

    We present the first J-band spectrum of Mrk 231, which reveals a large He I* λ10830 broad absorption line with a profile similar to that of the well-known Na I broad absorption line. Combining this spectrum with optical and UV spectra from the literature, we show that the unusual reddening noted by Veilleux et al. is explained by a reddening curve like those previously used to explain low values of total-to-selective extinction in Type Ia supernovae. The nuclear starburst may be the origin and location of the dust. Spatially resolved emission in the broad absorption line trough suggests nearly full coverage of the continuum emission region. The broad absorption lines reveal higher velocities in the He I* lines (produced in the quasar-photoionized H II region) compared with the Na I and Ca II lines (produced in the corresponding partially ionized zone). Cloudy simulations show that a density increase is required between the H II and partially ionized zones to produce ionic column densities consistent with the optical and IR absorption line measurements and limits, and that the absorber lies ∼100 pc from the central engine. These results suggest that the He I* lines are produced in an ordinary quasar BAL wind that impacts upon, compresses, and accelerates the nuclear starburst's dusty effluent (feedback in action), and the Ca II and Na I lines are produced in this dusty accelerated gas. This unusual circumstance explains the rarity of Na I absorption lines; without the compression along our line of sight, Mrk 231 would appear as an ordinary iron low-ionization, broad absorption line quasar.

  4. A weak diffuse interstellar band in the far-ultraviolet spectrum of zeta Ophiuchi?

    NASA Technical Reports Server (NTRS)

    Tripp, Todd M.; Cardelli, Jason A.; Savage, Blair D.

    1994-01-01

    Goddard High Resolution Spectrograph (GHRS) observations at 3.5 km/s resolution reveal several new weak unidentified interstellar absorption lines in the ultraviolet spectrum of zeta Ophiuchi. The unidentified line at 1369.13 A has the appearance and characteristics of a weak diffuse interstellar band (DIB). The line has a smooth profile similar to many optical diffuse interstellar bands (i.e., a shallow asymmetric profile), it is clearly broader than identified interstellar lines near it in wavelength, and its full width at half maximum in ergs is comparable to the widths of the weak optical DIBs. The asymmetric profile cannot be attributed to blended absorption from diffuse clouds at different velocities; at this resolution the two principal cloud complexes on the sight line at heliocentric velocities of -27 and -15 km/s are clearly separated. We compare this unidentified absorption feature to identified interstellar atomic and molecular absorption lines and optical DIBs observed on the zeta Oph and xi Per sight lines, and we conclude that it is reasonable to suggest that this absorption feature might be a DIB. This is not a unique interpretation however; the unidentified line could alternatively be due to gas in the zeta Oph H II region or a blend of unknown neutral atomic or molecular absorption lines.

  5. The millimeter and submillimeter spectrum of CF(+)

    NASA Technical Reports Server (NTRS)

    Plummer, G. M.; Anderson, T.; Herbst, E.; De Lucia, F. C.

    1986-01-01

    The application of a recently described technique for producing significantly enhanced concentrations of molecular ions for spectroscopic study to the detection and measurement of the millimeter and submillimeter wave spectrum of CF(+) is reported. The experimental procedure is discussed, and the measured absorption frequencies are shown and compared with those calculated from spectral constants. These constants are given together with those from the infrared spectrum by Kawaguchi and Hirota (1985).

  6. Vibronic coupling effect on circular dichroism spectrum: Carotenoid-retinal interaction in xanthorhodopsin

    NASA Astrophysics Data System (ADS)

    Fujimoto, Kazuhiro J.; Balashov, Sergei P.

    2017-03-01

    The role of vibronic coupling of antenna carotenoid and retinal in xanthorhodopsin (XR) in its circular dichroism (CD) spectrum is examined computationally. A vibronic exciton model combined with a transition-density-fragment interaction (TDFI) method is developed, and applied to absorption and CD spectral calculations of XR. The TDFI method is based on the electronic Coulomb and exchange interactions between transition densities for individual chromophores [K. J. Fujimoto, J. Chem. Phys. 137, 034101 (2012)], which provides a quantitative description of electronic coupling energy. The TDFI calculation reveals a dominant contribution of the Coulomb interaction to the electronic coupling energy and a negligible contribution of the exchange interaction, indicating that the antenna function of carotenoid results from the Förster type of excitation-energy transfer, not from the Dexter one. The calculated absorption and CD spectra successfully reproduce the main features of the experimental results, which allow us to investigate the mechanism of biphasic CD spectrum observed in XR. The results indicate that vibronic coupling between carotenoid and retinal plays a significant role in the shape of the CD spectrum. Further analysis reveals that the negative value of electronic coupling directly contributes to the biphasic shape of CD spectrum. This study also reveals that the C6—C7 bond rotation of salinixanthin is not the main factor for the biphasic CD spectrum although it gives a non-negligible contribution to the spectral shift. The present method is useful for analyzing the molecular mechanisms underlying the chromophore-chromophore interactions in biological systems.

  7. Optical absorption in semiconductor quantum dots coupling to dispersive phonons of infinite modes

    NASA Astrophysics Data System (ADS)

    Ding, Zhiwen; Wang, Qin; Zheng, Hang

    2012-10-01

    Optical absorption spectrum of semiconductor quantum dot is investigated by means of an analytical approach based on the Green's function for different forms of coupling strength in an unified method by using the standard model with valence and conduction band levels coupled to dispersive quantum phonons of infinite modes. The analytical expression of the optical absorption coefficient in semiconductor quantum dots is obtained and by this expression the line shape and the peak position of the absorption spectrum are procured. The relation between the properties of absorption spectrum and the forms of coupling strength is clarified, which can be referenced for choosing the proper form of the coupling strength or spectral density to control the features of absorption spectrum of quantum dot. The coupling and confinement induced energy shift and intensity decrease in the absorption spectrum are determined precisely for a wide range of parameters. The results show that the activation energy of the optical absorption is reduced by the effect of exciton-phonon coupling and photons with lower frequencies could also be absorbed in absorption process. With increase of the coupling constant, the line shape of optical absorption spectrum broadens and the peak position moves to lower photon energy with a rapid decrease in intensity at the same time. Both the coupling induced red shift and the confinement induced blue shift conduce to decrease in the intensity of absorption spectrum. Furthermore, this method may have application potential to other confined quantum systems.

  8. Microarray analysis of high-glucose diet-induced changes in mRNA expression in jejunums of C57BL/6J mice reveals impairment in digestion, absorption.

    PubMed

    Du, Dan; Shi, Yong-Hui; Le, Guo-Wei

    2010-04-01

    Long term intake of high-glucose diet (HGD) may induce many diseases such as dyslipidemia, fatty liver and diabetes disease. Most of the research for molecular mechanisms of the association between HGD and the above diseases focus on the metabolism of glucose and lipid. However, there are few studies on molecular mechanism of the effect of HGD on digestion and absorption. We used HGD (containing 20% glucose) to feed C57BL/6J mice for 4 weeks, detected the expressions of 13,098 genes in jejunums of C57BL/6J mice with DNA microarray. Microarray analysis showed the expression of genes related to digestive enzyme, gastrointestinal peptide and nutrient transporters were significantly changed, which indicated that HGD induced the suppression of digestive enzyme gene expression, attenuation of alimentary tract movement and nutrient transportation. In one word, the microarray analysis suggested that HGD impaired the function of digestion and absorption in jejunum of C57BL/6J mice. We validated our microarray findings by conducting real-time RT-PCR assays on selected genes and detecting the activities of disaccharidases such as lactase, maltase and sucrase in jejunum of C57BL/6J mice.

  9. The planet Venus - A new periodic spectrum variable.

    NASA Technical Reports Server (NTRS)

    Young, L. G.; Young, A. T.; Young, J. W.; Bergstralh, J. T.

    1973-01-01

    The apparent strength of CO2 absorptions in the spectrum of Venus varies by 20% in a period of 4 days. The variations are synchronous over the disk, and thus represent a fundamental dynamical mode of the atmosphere.

  10. Giant Two-photon Absorption in Circular Graphene Quantum Dots in Infrared Region

    PubMed Central

    Feng, Xiaobo; Li, Zhisong; Li, Xin; Liu, Yingkai

    2016-01-01

    We investigate theoretically the two-photon absorption (TPA) for circular graphene quantum dots (GQDs) with the edge of armchair and zigzag on the basis of electronic energy states obtained by solving the Dirac-Weyl equation numerically under finite difference method. The expressions for TPA cross section are derived and the transition selection rules are obtained. Results reveal that the TPA is significantly greater in GQDs than conventional semiconductor QDs in infrared spectrum (2–6 um) with a resonant TPA cross section of up to 1011 GM. The TPA peaks are tuned by the GQDs’ size, edge and electron relaxation rate. PMID:27629800

  11. Absorption and fluorescence of alexandrite and of titanium in sapphire and glass

    NASA Technical Reports Server (NTRS)

    Byvik, C. E.; Hess, R. V.; Buoncristiani, A. M.

    1985-01-01

    The fluorescence and absorption data for titanium in crystalline sapphire and titanium doped into two silicate and one phosphate glass structures are analyzed. It is observed that the Ti-doped silicate glass sample exhibits no absorption related to the Ti(III) ion, the Ti-doped phosphate glass is deep blue, the absorption line width of the glass samples are a factor of two larger than that of sapphire, and the absorption peak for the Ti in the glass shifted about 100 nm to the red from the Ti:sapphire absorption peak. This shift reveals that the Ti(III) ion is sensitive to the crystalline environment and not to the glass environment. The photoluminescence spectra for Ti-doped sapphire and alexandrite are compared. It is detected that the Ti:sapphire exhibits a broader spectrum than that for alexandrite with a peak at 750 nm. The three zero phonon transitions of Ti:Al2O3 at liquid nitrogen temperatures are studied.

  12. Existence of orbital order and its fluctuation in superconducting Ba(Fe(1-x)Co(x))2As2 single crystals revealed by x-ray absorption spectroscopy.

    PubMed

    Kim, Y K; Jung, W S; Han, G R; Choi, K-Y; Chen, C-C; Devereaux, T P; Chainani, A; Miyawaki, J; Takata, Y; Tanaka, Y; Oura, M; Shin, S; Singh, A P; Lee, H G; Kim, J-Y; Kim, C

    2013-11-22

    We performed temperature dependent x-ray linear dichroism (XLD) experiments on an iron pnictide system, Ba(Fe(1-x)Co(x))2As2 with x=0.00, 0.05, 0.08, and 0.10 to experimentally verify the existence of orbital ordering (OO). Substantial XLD was observed in polarization dependent x-ray absorption spectra of Fe L edges. By exploiting the difference in the temperature dependent behaviors, OO, and structure contributions to XLD could be clearly separated. The observed OO signal indicates different occupation numbers for d(yz) and d(zx) orbitals and supports the existence of ferro-OO. The results are also consistent with the theoretical prediction. Moreover, we find substantial OO signal well above the structural and magnetic transition temperatures, which suggests the existence of strong OO fluctuations up to high temperatures.

  13. Aggregation-induced near-infrared absorption of squaraine dye in an albumin nanocomplex for photoacoustic tomography in vivo.

    PubMed

    An, Fei-Fei; Deng, Zi-Jian; Ye, Jun; Zhang, Jin-Feng; Yang, Yin-Long; Li, Chang-Hui; Zheng, Cai-Jun; Zhang, Xiao-Hong

    2014-10-22

    Photoacoustic tomography (PAT) is a newly emerging noninvasive imaging modality that could be further enhanced using near-infrared (NIR)-absorbing materials as contrast agents. To date, the most extensively studied photoacoustic imaging agents are inorganic nanomaterials because organic materials with NIR-absorption capabilities are limited. In this study, a NIR-absorbing nanocomplex composed of a squaraine dye (SQ) and albumin was prepared based on the aggregation-induced NIR absorption of SQ. Through aggregation, the absorption spectrum of SQ was widened from the visible-light region to the NIR region, which facilitated photoacoustic signal generation in the tissue-transparent NIR optical window (700-900 nm). Blood analysis and histology measurements revealed that the nanocomplex can be used for PAT applications in vivo without obvious toxicity to living mice.

  14. Full-Field Calcium K-Edge X-ray Absorption Near-Edge Structure Spectroscopy on Cortical Bone at the Micron-Scale: Polarization Effects Reveal Mineral Orientation.

    PubMed

    Hesse, Bernhard; Salome, Murielle; Castillo-Michel, Hiram; Cotte, Marine; Fayard, Barbara; Sahle, Christoph J; De Nolf, Wout; Hradilova, Jana; Masic, Admir; Kanngießer, Birgit; Bohner, Marc; Varga, Peter; Raum, Kay; Schrof, Susanne

    2016-04-05

    Here, we show results on X-ray absorption near edge structure spectroscopy in both transmission and X-ray fluorescence full-field mode (FF-XANES) at the calcium K-edge on human bone tissue in healthy and diseased conditions and for different tissue maturation stages. We observe that the dominating spectral differences originating from different tissue regions, which are well pronounced in the white line and postedge structures are associated with polarization effects. These polarization effects dominate the spectral variance and must be well understood and modeled before analyzing the very subtle spectral variations related to the bone tissue variations itself. However, these modulations in the fine structure of the spectra can potentially be of high interest to quantify orientations of the apatite crystals in highly structured tissue matrices such as bone. Due to the extremely short wavelengths of X-rays, FF-XANES overcomes the limited spatial resolution of other optical and spectroscopic techniques exploiting visible light. Since the field of view in FF-XANES is rather large the acquisition times for analyzing the same region are short compared to, for example, X-ray diffraction techniques. Our results on the angular absorption dependence were verified by both site-matched polarized Raman spectroscopy, which has been shown to be sensitive to the orientation of bone building blocks and by mathematical simulations of the angular absorbance dependence. As an outlook we further demonstrate the polarization based assessment of calcium-containing crystal orientation and specification of calcium in a beta-tricalcium phosphate (β-Ca3(PO4)2 scaffold implanted into ovine bone. Regarding the use of XANES to assess chemical properties of Ca in human bone tissue our data suggest that neither the anatomical site (tibia vs jaw) nor pathology (healthy vs necrotic jaw bone tissue) affected the averaged spectral shape of the XANES spectra.

  15. Optical absorption coefficients of pure water

    NASA Astrophysics Data System (ADS)

    Lu, Zheng; Zhao, Xianzhen; Fry, Edward S.

    2002-10-01

    The integrating cavity absorption meter(ICAM), which is independent of scattering effect, is used to measure the absolute values of small optical absorption coefficients of liquid. A modified ICAM is being used to measure the absorption of water in the wavelength range 300 to 700 nm. The ultrapure water produced by a two-stages water purification system reaches Type I quality. This is equal to or better than ASTM,CAP and NCCLS water quality standards. To avoid the fact that dissolved oxygen absorbs ultraviolet light due to the photochemical effect, the water sample is delivered through a nitrogen sealed system which will prevent the sample from contacting with oxygen. A compassion of our absorption spectrum with other existing data is given.

  16. High-Absorption-Efficiency Superlattice Solar Cells by Excitons

    NASA Astrophysics Data System (ADS)

    Nishinaga, Jiro; Kawaharazuka, Atsushi; Onomitsu, Koji; Horikoshi, Yoshiji

    2013-11-01

    The effect of excitonic absorption on solar cell efficiency has been investigated using solar cells with AlGaAs/GaAs superlattice structures. Numerical calculations reveal that excitonic absorption considerably enhances the overall absorption of bulk GaAs. Excitonic absorption shows strong and sharp peaks at the absorption edge and in the energy region above the band gap. Absorption enhancement is also achieved in the AlGaAs/GaAs superlattice. The measured quantum efficiency spectra of the superlattice solar cells are quite similar to the calculated absorption spectra considering the excitonic effect. The superlattice solar cells are confirmed to have high absorption coefficient compared with the GaAs and AlGaAs bulk solar cells. These results suggest that the enhanced absorption by excitons can increase the quantum efficiency of solar cells. This effect is more prominent for the solar cells with small absorption layer thicknesses.

  17. Hydrogen Absorption into Austenitic Stainless Steels Under High-Pressure Gaseous Hydrogen and Cathodic Charge in Aqueous Solution

    NASA Astrophysics Data System (ADS)

    Enomoto, Masato; Cheng, Lin; Mizuno, Hiroyuki; Watanabe, Yoshinori; Omura, Tomohiko; Sakai, Jun'ichi; Yokoyama, Ken'ichi; Suzuki, Hiroshi; Okuma, Ryuji

    2014-12-01

    Type 316L and Type 304 austenitic stainless steels, both deformed and non-deformed, were hydrogen charged cathodically in an aqueous solution as well as by exposure to high-pressure gaseous hydrogen in an attempt to identify suitable conditions of cathodic charge for simulating hydrogen absorption from gaseous hydrogen environments. Thermal desorption analysis (TDA) was conducted, and the amount of absorbed hydrogen and the spectrum shape were compared between the two charging methods. Simulations were performed by means of the McNabb-Foster model to analyze the spectrum shape and peak temperature, and understand the effects of deformation on the spectra. It was revealed that the spectrum shape and peak temperature were dependent directly upon the initial distribution of hydrogen within the specimen, which varied widely according to the hydrogen charge condition. Deformation also had a marked effect on the amount of absorbed hydrogen in Type 304 steel due to the strain-induced martensitic transformation.

  18. Estimation of molar absorptivities and pigment sizes for eumelanin and pheomelanin using femtosecond transient absorption spectroscopy

    NASA Astrophysics Data System (ADS)

    Piletic, Ivan R.; Matthews, Thomas E.; Warren, Warren S.

    2009-11-01

    Fundamental optical and structural properties of melanins are not well understood due to their poor solubility characteristics and the chemical disorder present during biomolecular synthesis. We apply nonlinear transient absorption spectroscopy to quantify molar absorptivities for eumelanin and pheomelanin and thereby get an estimate for their average pigment sizes. We determine that pheomelanin exhibits a larger molar absorptivity at near IR wavelengths (750nm), which may be extended to shorter wavelengths. Using the molar absorptivities, we estimate that melanin pigments contain ˜46 and 28 monomer units for eumelanin and pheomelanin, respectively. This is considerably larger than the oligomeric species that have been recently proposed to account for the absorption spectrum of eumelanin and illustrates that larger pigments comprise a significant fraction of the pigment distribution.

  19. Estimation of molar absorptivities and pigment sizes for eumelanin and pheomelanin using femtosecond transient absorption spectroscopy.

    PubMed

    Piletic, Ivan R; Matthews, Thomas E; Warren, Warren S

    2009-11-14

    Fundamental optical and structural properties of melanins are not well understood due to their poor solubility characteristics and the chemical disorder present during biomolecular synthesis. We apply nonlinear transient absorption spectroscopy to quantify molar absorptivities for eumelanin and pheomelanin and thereby get an estimate for their average pigment sizes. We determine that pheomelanin exhibits a larger molar absorptivity at near IR wavelengths (750 nm), which may be extended to shorter wavelengths. Using the molar absorptivities, we estimate that melanin pigments contain approximately 46 and 28 monomer units for eumelanin and pheomelanin, respectively. This is considerably larger than the oligomeric species that have been recently proposed to account for the absorption spectrum of eumelanin and illustrates that larger pigments comprise a significant fraction of the pigment distribution.

  20. [Effect of Long-Term Fertilization on Organic Nitrogen Functional Groups in Black Soil as Revealed by Synchrotron-Based X-Ray Absorption Near-Edge Structure Spectroscopy].

    PubMed

    Li, Hui; Gao, Qiang; Wang, Shuai; Zhu, Ping; Zhang, Jin-jing; Zhao, Yi-dong

    2015-07-01

    Nitrogen (N) is a common limiting nutrient in crop production. The N content of soil has been used as an important soil fertility index. Organic N is the major form of N in soil. In most agricultural surface soils, more than 90% of total N occurs in organic forms. Therefore, understanding the compositional characteristics of soil organic N functional groups can provide the scientific basis for formulating the reasonable farmland management strategies. Synchrotron radiation soft X-ray absorption near-edge structure (N K-edge XANES) spectroscopy is the most powerful tool to characterize in situ organic N functional groups compositions in soil. However, to our most knowledge, no studies have been conducted to examine the organic N functional groups compositions of soil using N K-edge XANES spectroscopy under long-term fertilization practices. Based on a long-term field experiment (started in 1990) in a black soil (Gongzhuling, Northeast China), we investigated the differences in organic N functional groups compositions in bulk soil and clay-size soil fraction among fertilization patterns using synchrotron-based N K- edge XANES spectroscopy. Composite soil samples (0-20 cm) were collected in 2008. The present study included six treatments: farmland fallow (FALL), no-fertilization control (CK), chemical nitrogen, phosphorus, and potassium fertilization (NPK), NPK in combination with organic manure (NPKM), 1.5 times of NPKM (1.5 NPKM), and NPK in combination with maize straw (NPKS). The results showed that N K-edge XANES spectra of all the treatments under study exhibited characteristic absorption peaks in the ranges of 401.2-401.6 and 402.7-403.1 eV, which were assigned as amides/amine-N and pyrrole-N, respectively. These characteristic absorption peaks were more obvious in clay-size soil fraction than in bulk soil. The results obtained from the semi-quantitative analysis of N K-edge XANES spectra indicated that the relative proportion of amides/amine-N was the highest

  1. Mid-infrared FEL absorption spectra

    NASA Astrophysics Data System (ADS)

    Kozub, John A.; Feng, Bibo; Gabella, William E.

    2002-04-01

    The Vanderbilt Mark III FEL is a tunable source of high- intensity coherent mid-infrared radiation occurring as a train of picosecond pulses spaced 350ps apart. The laser beam is transported to each laboratory under vacuum, but is typically transmitted through some distance of atmosphere before reaching the target. Losses due to absorption by water vapor and CO2 can be large, and since the bandwidth of the FEL is several percent of the wavelength, the spectrum can be altered by atmospheric absorptions. In order to provide an accurate representation of the laser spectrum delivered to the target, and to investigate any non-linear effects associated with transport of the FEL beam, we have recorded the spectrum of the FEL output using a vacuum spectrometer positioned after measured lengths of atmosphere. The spectrometer is equipped with a linear pyroelectric array which provides the laser spectrum for each pulse. Absorption coefficients are being measured for laboratory air, averaged over the bandwidth of the FEL. The high peak powers of this Fel have induced damage in common infrared-transparent materials; we are also measuring damage thresholds for several materials at various wavelengths.

  2. Deimos: A featureless asteroid-like spectrum

    NASA Technical Reports Server (NTRS)

    Grundy, W. M.; Fink, Uwe

    1991-01-01

    High quality CCD spectra were obtained of Deimos from 0.5 to 1.0 micron at a spectral resolution of 15A at the time of the 1988 Mars opposition. The data acquisition and reduction methods allowed the quantitative prevention of scattered light from Mars contaminating the spectra. Solar analog stars BS560, BS2007, and BS8931 were observed the same night to allow removal of telluric absorptions. The ratio spectrum of Deimos has a red slope, increasing in reflectance by a factor of approx. 50 pct. over the one octave wavelength interval observed. Other than this slope, the spectrum is remarkably featureless. The absence of absorption bands in the spectrum of Deimos is in marked contrast with the spectra of Martian surface materials. No trace of the Fe(2+) charge transfer absorption band around 1 micron is observed, which rules out the presence of significant quantities of minerals such as the pyroxenes or olivine at the surface of Deimos. The featureless red spectrum of Deimos appears to be consistent with a surface composition of fine grained carbonaceous chondrite type material. An analysis is presented of the spectrum of Deimos which makes use of the Hapke scattering surface model.

  3. Derivation of water vapour absorption cross-sections in the red region

    NASA Technical Reports Server (NTRS)

    Lal, M.; Chakrabarty, D. K.

    1994-01-01

    Absorption spectrum in 436 to 448 nm wavelength region gives NO2 and O3 column densities. This spectrum can also give H2O column density. The spectrum in the range of 655 to 667 nm contains absorption due to NO3 and H2O. Combining the absorption spectra in the wavelength ranges of 436 to 448 and 655 to 667 nm, water vapor absorption cross-sections in this range comes out to be of the order of 2.0 x 10(exp -24) cm(exp -2).

  4. The Amazing COS FUV (1320 - 1460 A) Spectrum of (lambda) Vel (K4Ib-II)

    NASA Technical Reports Server (NTRS)

    Carpenter, Kenneth

    2010-01-01

    The FUV spectrum (1320-1460 A) of the K4 lb-11 supergiant (lambda) Vel was observed with the Cosmic Origins Spectrograph (COS) on HST, as part of the Ayres and Redfield Cycle 17 SNAP program "SNAPing Coronal Iron". This spectrum covers a region not previously recorded in (lambda) Vel at high resolution and, in a mere 20 minutes of exposure, reveals a treasure trove of information. It shows a wide variety of strong emission lines, superposed on a bright continuum, with contributions from both atomic and molecular species. Multiple absorptions, including numerous Ni II and Fe II lines, are visible over this continuum, which is likely generated in the chromosphere of the star. Evidence of the stellar wind is seen in the P Cygni profiles of the CII lines near 1335 A and the results of fluorescence processes are visible throughout the region. The spectrum has remarkable similarities to that of (alpha) Boo (K1.5 III), but significant differences as well, including substantial FUV continuum emission, reminiscent of the M2 Iab supergiant (alpha) Ori, but minus the CO fundamental absorption bands seen in the spectrum of the latter star. However, fluoresced CO emission is present, as in the K-giant stars (alpha) Boo and (alpha) Tau (K5 III). The presence of hot plasma in the atmosphere of the star, indicated by previous GHRS observations of Si III] and C III] lines near 1900 A and FUSE observations of O VI 1032 A, is further confirmed by the detection in this COS spectrum of the Si IV UV 1 lines near 1400 A, though both lines are contaminated by overlying fluorescent H2 emission. We present the details of this spectrum, in comparison with stars of similar temperature or luminosity and discuss the implications for the structure of, and the radiative processes active in, the outer atmospheres of these stars.

  5. Fourier Transform Infrared Spectroscopy Measurements of Multi-phonon and Free-Carrier Absorption in ZnO

    NASA Astrophysics Data System (ADS)

    Saadatkia, Pooneh; Ariyawansa, G.; Leedy, K. D.; Look, D. C.; Boatner, L. A.; Selim, F. A.

    2016-12-01

    Fourier transform infrared (FTIR) measurements were carried out on thin films and bulk single crystals of ZnO over a wide temperature range to study the free-carrier and multi-phonon infrared absorptions and the effects of hydrogen incorporation on these properties. Aluminum-doped ZnO thin films were deposited on quartz substrates using atomic-layer deposition (ALD) and sol-gel methods. Hall-effect measurements showed that the ALD films have a resistivity of ρ = 1.11 × 10-3 Ω cm, three orders of magnitude lower than sol-gel films ( ρ = 1.25 Ω cm). This result is consistent with the significant difference in their free-carrier absorption as revealed by FTIR spectra obtained at room temperature. By reducing the temperature to 80 K, the free carriers were frozen out, and their absorption spectrum was suppressed. From the FTIR measurements on ZnO single crystals that were grown by the chemical vapor transport method, we identified a shoulder around 3350 cm-1 and associated it with the presence of two or more hydrogen ions in a Zn vacancy. After reducing the hydrogen level in the crystal, the measurements revealed the multi-phonon absorption of ZnO in the range of 700-1200 cm-1. This study shows that the multi-phonon absorption bands can be completely masked by the presence of a large concentration of hydrogen in the crystals.

  6. Observation of an Intermediate Band in Sn-doped Chalcopyrites with Wide-spectrum Solar Response

    PubMed Central

    Yang, Chongyin; Qin, Mingsheng; Wang, Yaoming; Wan, Dongyun; Huang, Fuqiang; Lin, Jianhua

    2013-01-01

    Nanostrcutured particles and polycrystalline thin films of Sn-doped chalcopyrite are synthesized by newly-developed methods. Surprisingly, Sn doping introduces a narrow partially filled intermediate band (IB) located ~1.7 eV (CuGaS2) and ~0.8 eV (CuInS2) above the valance band maximum in the forbidden band gap. Diffuse reflection spectra and photoluminescence spectra reveal extra absorption and emission spectra induced by the IBs, which are further supported by first-principle calculations. Wide spectrum solar response greatly enhances photocatalysis, photovoltaics, and photo-induced hydrogen production due to the intermediate band. PMID:23412565

  7. Fe-substituted indium thiospinels: New intermediate band semiconductors with better absorption of solar energy

    NASA Astrophysics Data System (ADS)

    Chen, Ping; Chen, Haijie; Qin, Mingsheng; Yang, Chongyin; Zhao, Wei; Liu, Yufeng; Zhang, Wenqing; Huang, Fuqiang

    2013-06-01

    The indium thiospinels In2S3 and MgIn2S4 are promising host for the intermediated band (IB) photovoltaic materials due to their ideal band gap value. Here, the optical properties and electronic structure of Fe-doped In2S3 and MgIn2S4 have been investigated. All the Fe-substituted semiconductors exhibit two additional absorption bands at about 0.7 and 1.25 eV, respectively. The results of first-principles calculations revealed that the Fe substituted at the octahedral In site would introduce a partially filled IB into the band gap. Thanks to the formation of IB, the Fe-substituted semiconductors have the ability to absorb the photons with energies below the band gap. With the wide-spectrum absorption of solar energy, these materials possess potential applications in photovoltaic domain.

  8. Experimental determination of terahertz atmospheric absorption parameters

    NASA Astrophysics Data System (ADS)

    Slocum, David M.; Goyette, Thomas M.; Giles, Robert H.; Nixon, William E.

    2015-05-01

    The terahertz frequency regime is often used as the `chemical fingerprint' region of the electromagnetic spectrum since many molecules exhibit a dense selection of rotational and vibrational transitions. Water is a major component of the atmosphere and since it has a large dipole moment the propagation of terahertz radiation will be dominated by atmospheric effects. This study will present the results of high-­-resolution broadband measurements of the terahertz atmospheric absorption and detail the technique for directly measuring the pressure broadening coefficients, absolute absorption coefficients, line positions, and continuum effects. Differences between these measured parameters and those tabulated in HITRAN will be discussed. Once the water vapor absorption was characterized, the same technique was used to measure the line parameters for methanol, a trace gas of interest within Earth's atmosphere. Methanol has a dense absorption spectrum in the terahertz frequency region and is an important molecule in fields such as environmental monitoring, security, and astrophysics. The data obtained in the present study will be of immediate use for the remote sensing community, as it is uncommon to measure this many independent parameters as well as to measure the absolute absorption of the transitions. Current models rely on tabulated databases of calculated values for the line parameters measured in this study. Differences between the measured data and those in the databases will be highlighted and discussed.

  9. [Ultraviolet absorption spectra of iodine, iodide ion and triiodide ion].

    PubMed

    Wei, Yong-Ju; Liu, Cui-Ge; Mo, Li-Ping

    2005-01-01

    Ultraviolet absorption spectra of iodine I2, iodide ion I(-) and triiodide ion I3(-) were studied, and molar absorptivities of these species were determined. Absorption spectrum of I2 aqueous solution appears as an absorption peak at 203 nm with a molar absorptivity of 1.96 x 10(4) L x mol(-1) x cm(-1). Absorption spectrum of I(-) appears as two absorption peaks at 193 and 226 nm with molar absorptivities of 1.42 x 10(4) and 1.34 x 10(4) L x mol(-1) x cm(-1), respectively. When I2 aqueous solution is mixed with KI solution, two absorption peaks appear at 288 and 350 nm, respectively, indicating the formation of I3(-). Using saturation method, molar absorptivities of I3(-) at 288 and 350 nm were determined to be 3.52 x 10(4) and 2.32 x 10(4) L x mol(-1) x cm(-1), respectively.

  10. [Visible light reflectance spectrum for measurement of cancerous tissue].

    PubMed

    Wang, Cheng; Fan, Jin; Ren, Qiu-Shi

    2008-01-01

    A goal the authors always pursue is to realize diagnosis of precancer in vivo, real-time and non-invasive. In the present paper, results of diagnosis of certain cancer were obtained by pathological analysis of several samples, and then the visible light reflectance spectrum property of cancerous tissue was acquired by the comparison with the reflectance spectrum of normal tissue in the same organ. It was found that the main result of change in the reflectance spectrum was caused by the increases in hemoglobin and deoxygenated hemoglobin. The cancerous tissue has a lower reflectance in visible spectrum and has the strongest change in the absorption at 630 nm. Absorption peaks in the reflectance spectrum indicated that there are abundant of oxygenated hemoglobin and deoxygenated hemoglobin in the cancerous tissue. It is the same characteristics as in the cancerous tissue. It was fully indicated experimentally that visible light reflectance spectrum can distinguish normal and cancerous tissue.

  11. K-edge x-ray absorption spectra of Cs and Xe

    SciTech Connect

    Gomilsek, J. Padeznik; Kodre, A.; Arcon, I.; Hribar, M.

    2003-10-01

    X-ray absorption spectrum of cesium vapor in the K-edge region is measured in a stainless steel cell. The spectrum is free of the x-ray absorption fine structure signal and shows small features analogous to those in the spectrum of the neighbor noble gas Xe. Although the large natural width of the K vacancy (>10 eV) washes out most of the details, fingerprints of multielectron excitations can be recognized at energies close to Dirac-Fock estimates of doubly excited states 1s4(d,p,s) and 1s3(d,p). Among these, the 1s3p excitation 1000 eV above the K edge in both spectra is the deepest double excitation observed so far. Within the K-edge profile, some resolution is recovered with numerical deconvolution of the spectra, revealing the coexcitation of the 5(p,s) electrons, and even the valence 6s electron in Cs. As in homologue elements, three-electron excitations, either as separate channels or as configuration admixtures are required to explain some spectral features in detail.

  12. Triplet absorption spectroscopy and electromagnetically induced transparency

    NASA Astrophysics Data System (ADS)

    Ghafoor, F.; Nazmitdinov, R. G.

    2016-09-01

    Coherence phenomena in a four-level atomic system, cyclically driven by three coherent fields, are investigated thoroughly at zero and weak magnetic fields. Each strongly interacting atomic state is converted to a triplet due to a dynamical Stark effect. Two dark lines with a Fano-like profile arise in the triplet absorption spectrum with anomalous dispersions. We provide conditions to control the widths of the transparency windows by means of the relative phase of the driving fields and the intensity of the microwave field, which closes the optical system loop. The effect of Doppler broadening on the results of the triplet absorption spectroscopy is analysed in detail.

  13. Optomechanically induced transparency and absorption in hybridized optomechanical systems

    NASA Astrophysics Data System (ADS)

    Hou, B. P.; Wei, L. F.; Wang, S. J.

    2015-09-01

    We present the normal-mode splitting and optomechanically induced transparency or absorption phenomena in the strongly tunnel-coupled optomechanical cavities. In the probe output spectrum, there appear central transparency windows or absorption peaks around which two broad sidebands are symmetrically located. It has been confirmed by the quantitative findings that two broad sidebands, which include the distorted absorption peaks, indicate the normal-mode splitting of the two hybridized cavities, and central transparency windows or absorption peaks character the interference induced by the optomechanical interactions. Additionally, the switching from absorption to amplification can be realized by only adjusting the tunnel interaction. These spectrum properties can be used for the coherent control of light pulses via microfabricated optomechanical arrays.

  14. Synopsis of Mid-latitude Radio Wave Absorption in Europe

    NASA Technical Reports Server (NTRS)

    Torkar, K. M.; Friedrich, M.

    1984-01-01

    Radio wave absorption data covering almost two years from Europe to Central Asia are presented. They are normalized by relating them to a reference absorption. Every day these normalized data are fitted to a mathematical function of geographical location in order to obtain a daily synopsis of radio wave absorption. A film of these absorption charts was made which is intended to reveal movements of absorption or absorption anomaly. In addition, radiance (temperature) data from the lower D-region are also plotted onto these charts.

  15. Atmospheric absorption cell characterization

    NASA Astrophysics Data System (ADS)

    1982-06-01

    The measurement capability of the Avionics Laboratory IR Facility was used to evaluate an absorption cell that will be used to simulate atmospheric absorption over horizontal paths of 1 - 10 km in length. Band models were used to characterize the transmittance of carbon dioxide (CO2), nitrogen (N2), and nitrous oxide (N2O) in the cell. The measured transmittance was compared to the calculated values. Nitrous oxide is important in the 4 - 4.5 micron range in shaping the weak line absorption of carbon dioxide. The absorption cell is adequate for simulating atmospheric absorption over these paths.

  16. NuSTAR and XMM-NEWTON Observations of NGC 1365: Extreme Absorption Variability and a Constant Inner Accretion Disk

    NASA Astrophysics Data System (ADS)

    Walton, D. J.; Risaliti, G.; Harrison, F. A.; Fabian, A. C.; Miller, J. M.; Arevalo, P.; Ballantyne, D. R.; Boggs, S. E.; Brenneman, L. W.; Christensen, F. E.; Craig, W. W.; Elvis, M.; Fuerst, F.; Gandhi, P.; Grefenstette, B. W.; Hailey, C. J.; Kara, E.; Luo, B.; Madsen, K. K.; Marinucci, A.; Matt, G.; Parker, M. L.; Reynolds, C. S.; Rivers, E.; Ross, R. R.; Stern, D.; Zhang, W. W.

    2014-06-01

    We present a spectral analysis of four coordinated NuSTAR+XMM-Newton observations of the Seyfert galaxy NGC 1365. These exhibit an extreme level of spectral variability, which is primarily due to variable line-of-sight absorption, revealing relatively unobscured states in this source for the first time. Despite the diverse range of absorption states, each of the observations displays the same characteristic signatures of relativistic reflection from the inner accretion disk. Through time-resolved spectroscopy, we find that the strength of the relativistic iron line and the Compton reflection hump relative to the intrinsic continuum are well correlated, which is expected if they are two aspects of the same broadband reflection spectrum. We apply self-consistent disk reflection models to these time-resolved spectra in order to constrain the inner disk parameters, allowing for variable, partially covering absorption to account for the vastly different absorption states that were observed. Each of the four observations is treated independently to test the consistency of the results obtained for the black hole spin and the disk inclination, which should not vary on observable timescales. We find both the spin and the inclination determined from the reflection spectrum to be consistent, confirming that NGC 1365 hosts a rapidly rotating black hole; in all cases the dimensionless spin parameter is constrained to be a* > 0.97 (at 90% statistical confidence or better).

  17. NuSTAR and XMM-Newton observations of NGC 1365: Extreme absorption variability and a constant inner accretion disk

    SciTech Connect

    Walton, D. J.; Harrison, F. A.; Fuerst, F.; Grefenstette, B. W.; Madsen, K. K.; Risaliti, G.; Fabian, A. C.; Kara, E.; Miller, J. M.; Arevalo, P.; Ballantyne, D. R.; Boggs, S. E.; Craig, W. W.; Brenneman, L. W.; Elvis, M.; Christensen, F. E.; Gandhi, P.; Hailey, C. J.; Luo, B.; Marinucci, A.; and others

    2014-06-10

    We present a spectral analysis of four coordinated NuSTAR+XMM-Newton observations of the Seyfert galaxy NGC 1365. These exhibit an extreme level of spectral variability, which is primarily due to variable line-of-sight absorption, revealing relatively unobscured states in this source for the first time. Despite the diverse range of absorption states, each of the observations displays the same characteristic signatures of relativistic reflection from the inner accretion disk. Through time-resolved spectroscopy, we find that the strength of the relativistic iron line and the Compton reflection hump relative to the intrinsic continuum are well correlated, which is expected if they are two aspects of the same broadband reflection spectrum. We apply self-consistent disk reflection models to these time-resolved spectra in order to constrain the inner disk parameters, allowing for variable, partially covering absorption to account for the vastly different absorption states that were observed. Each of the four observations is treated independently to test the consistency of the results obtained for the black hole spin and the disk inclination, which should not vary on observable timescales. We find both the spin and the inclination determined from the reflection spectrum to be consistent, confirming that NGC 1365 hosts a rapidly rotating black hole; in all cases the dimensionless spin parameter is constrained to be a* > 0.97 (at 90% statistical confidence or better).

  18. Scanning electron microscopy/energy dispersive spectrometry fixedbeam or overscan x-ray microanalysis of particles can miss the real structure: x-ray spectrum image mapping reveals the true nature

    NASA Astrophysics Data System (ADS)

    Newbury, Dale E.; Ritchie, Nicholas W. M.

    2013-05-01

    The typical strategy for analysis of a microscopic particle by scanning electron microscopy/energy dispersive spectrometry x-ray microanalysis (SEM/EDS) is to use a fixed beam placed at the particle center or to continuously overscan to gather an "averaged" x-ray spectrum. While useful, such strategies inevitably concede any possibility of recognizing microstructure within the particle, and such fine scale structure is often critical for understanding the origins, behavior, and fate of particles. Elemental imaging by x-ray mapping has been a mainstay of SEM/EDS analytical practice for many years, but the time penalty associated with mapping with older EDS technology has discouraged its general use and reserved it more for detailed studies that justified the time investment. The emergence of the high throughput, high peak stability silicon drift detector (SDD-EDS) has enabled a more effective particle mapping strategy: "flash" x-ray spectrum image maps can now be recorded in seconds that capture the spatial distribution of major (concentration, C > 0.1 mass fraction) and minor (0.01 <= C <= 0.1) constituents. New SEM/SDD-EDS instrument configurations feature multiple SDDs that view the specimen from widely spaced azimuthal angles. Multiple, simultaneous measurements from different angles enable x-ray spectrometry and mapping that can minimize the strong geometric effects of particles. The NIST DTSA-II software engine is a powerful aid for quantitatively analyzing EDS spectra measured individually as well as for mapping information (available free for Java platforms at: http://www.cstl.nist.gov/div837/837.02/epq/dtsa2/index.html).

  19. Sequential and Coupled Proton and Electron Transfer Events in the S2 → S3 Transition of Photosynthetic Water Oxidation Revealed by Time-Resolved X-ray Absorption Spectroscopy.

    PubMed

    Zaharieva, Ivelina; Dau, Holger; Haumann, Michael

    2016-12-20

    The choreography of electron transfer (ET) and proton transfer (PT) in the S-state cycle at the manganese-calcium (Mn4Ca) complex of photosystem II (PSII) is pivotal for the mechanism of photosynthetic water oxidation. Time-resolved room-temperature X-ray absorption spectroscopy (XAS) at the Mn K-edge was employed to determine the kinetic isotope effect (KIE = τD2O/τH2O) of the four S transitions in a PSII membrane particle preparation in H2O and D2O buffers. We found a small KIE (1.2-1.4) for manganese oxidation by ET from Mn4Ca to the tyrosine radical (YZ(•+)) in the S0(n) → S1(+) and S1(n) → S2(+) transitions and for manganese reduction by ET from substrate water to manganese ions in the O2-evolving S3(n) → S0(n) step, but a larger KIE (∼1.8) for manganese oxidation in the S2(n) → S3(+) step (subscript, number of accumulated oxidizing equivalents; superscript, charge of Mn4Ca). Kinetic lag phases detected in the XAS transients prior to the respective ET steps were assigned to S3(+) → S3(n) (∼150 μs, H2O; ∼380 μs, D2O) and S2(+) → S2(n) (∼25 μs, H2O; ∼120 μs, D2O) steps and attributed to PT events according to their comparatively large KIE (∼2.4, ∼4.5). Our results suggest that proton movements and molecular rearrangements within the hydrogen-bonded network involving Mn4Ca and its bound (substrate) water ligands and the surrounding amino acid/water matrix govern to different extents the rates of all ET steps but affect particularly strongly the S2(n) → S3(+) transition, assigned as proton-coupled electron transfer. Observation of a lag phase in the classical S2 → S3 transition verifies that the associated PT is a prerequisite for subsequent ET, which completes Mn4Ca oxidation to the all-Mn(IV) level.

  20. Dust in MG II Absorption Systems

    NASA Astrophysics Data System (ADS)

    Malhotra, S.

    The dust absorption feature at 2175 AA is detected in a composite spectrum of Mg II absorbers. The composite absorber spectrum is obtained by taking the geometric mean of 92 quasar spectra after aligning them in the rest-frame of 96 absorbers. By aligning the spectra according to absorber redshifts we reinforce the spectral features of the absorbers, and smooth over possible bumps and wiggles in the emission spectra. The width of the observed absorption feature is 200-300 AA (FWHM), or 0.4-0.6 microns^{-1} and the central wavelength is 2240 AA. The Galactic dust feature has a central wavelength of 2176 AA and FWHM = 0.8-1.25 microns^{-1}. Simulations show that this discrepancy between the properties of the 2175 AA feature in Mg II absorbers and Galactic ISM can be mostly explained by the different methods used to measure them (cf. Malhotra 1997).

  1. Ligand effects on the X-ray absorption of a nickel porphyrin complex: a simulation study

    NASA Astrophysics Data System (ADS)

    Campbell, Luke; Tanaka, Satoshi; Mukamel, Shaul

    2004-04-01

    We present a simulation of the X-ray absorption near-edge spectrum (XANES) of the metal porphyrin NiTPP (nickel tetraphenylporphyrin) and investigate the changes to the spectrum caused by adding piperidine ligands to the metal atom. The main features in the experimental spectrum (Chen et al., Science 292 (2001) 262) are interpreted in terms of changes in the electronic structure.

  2. Nanofluid optical property characterization: towards efficient direct absorption solar collectors.

    PubMed

    Taylor, Robert A; Phelan, Patrick E; Otanicar, Todd P; Adrian, Ronald; Prasher, Ravi

    2011-03-15

    Suspensions of nanoparticles (i.e., particles with diameters < 100 nm) in liquids, termed nanofluids, show remarkable thermal and optical property changes from the base liquid at low particle loadings. Recent studies also indicate that selected nanofluids may improve the efficiency of direct absorption solar thermal collectors. To determine the effectiveness of nanofluids in solar applications, their ability to convert light energy to thermal energy must be known. That is, their absorption of the solar spectrum must be established. Accordingly, this study compares model predictions to spectroscopic measurements of extinction coefficients over wavelengths that are important for solar energy (0.25 to 2.5 μm). A simple addition of the base fluid and nanoparticle extinction coefficients is applied as an approximation of the effective nanofluid extinction coefficient. Comparisons with measured extinction coefficients reveal that the approximation works well with water-based nanofluids containing graphite nanoparticles but less well with metallic nanoparticles and/or oil-based fluids. For the materials used in this study, over 95% of incoming sunlight can be absorbed (in a nanofluid thickness ≥10 cm) with extremely low nanoparticle volume fractions - less than 1 × 10-5, or 10 parts per million. Thus, nanofluids could be used to absorb sunlight with a negligible amount of viscosity and/or density (read: pumping power) increase.

  3. Nanofluid optical property characterization: towards efficient direct absorption solar collectors

    PubMed Central

    2011-01-01

    Suspensions of nanoparticles (i.e., particles with diameters < 100 nm) in liquids, termed nanofluids, show remarkable thermal and optical property changes from the base liquid at low particle loadings. Recent studies also indicate that selected nanofluids may improve the efficiency of direct absorption solar thermal collectors. To determine the effectiveness of nanofluids in solar applications, their ability to convert light energy to thermal energy must be known. That is, their absorption of the solar spectrum must be established. Accordingly, this study compares model predictions to spectroscopic measurements of extinction coefficients over wavelengths that are important for solar energy (0.25 to 2.5 μm). A simple addition of the base fluid and nanoparticle extinction coefficients is applied as an approximation of the effective nanofluid extinction coefficient. Comparisons with measured extinction coefficients reveal that the approximation works well with water-based nanofluids containing graphite nanoparticles but less well with metallic nanoparticles and/or oil-based fluids. For the materials used in this study, over 95% of incoming sunlight can be absorbed (in a nanofluid thickness ≥10 cm) with extremely low nanoparticle volume fractions - less than 1 × 10-5, or 10 parts per million. Thus, nanofluids could be used to absorb sunlight with a negligible amount of viscosity and/or density (read: pumping power) increase. PMID:21711750

  4. Terahertz Spectrum of Trioxane

    NASA Astrophysics Data System (ADS)

    Klein, H.; Belov, S. P.; Winnewisser, G.

    1996-02-01

    The pure rotational spectrum of trioxane, (H2CO)3 the trimer of formaldehyde, has been recorded with high resolution in the frequency range between 326 and 947 GHz for the main isotopomer, the 13 C, and the 18O isotopic species in the vibrational ground state. These new high J and K data reveal that the molecule is fairly rigid. For the constants determinable from the recorded high J and K spectra (J = 90 and K = 75) the rotational constant B = 5273.257 180(33) MHz, the two quartic centrifugal distortion constants DJ, and DJK, and the three sextic constants HJ, HJK, and HKJ are needed in the fit to reproduce the measured spectra within experimental accuracy. In addition, for the 13C isotopomer the sextic constants HJK and HKJ are determined as well as the off-diagonal parameters d1 and d2.

  5. Supercontinuum of a 3.9 -μ m filament in air: Formation of a two-octave plateau and nonlinearly enhanced linear absorption

    NASA Astrophysics Data System (ADS)

    Panov, Nikolay A.; Shipilo, Daniil E.; Andreeva, Vera A.; Kosareva, Olga G.; Saletsky, Alexander M.; Xu, Huailiang; Polynkin, Pavel

    2016-10-01

    Through numerical simulations we reveal the scenario of 3.9 -μ m filament spectrum enrichment in the atmosphere in the cases of linear and circular polarization of the incident pulse. The discrete spectrum of odd harmonics transforms into the two-octave plateau in the case of linear polarization. In contrast, in the case of circular polarization of the incident pulse, the harmonic-free flat supercontinuum appears with the plasma onset, reaching the tenth harmonic of the input radiation. We identify the energy balance specific to the filamentation near 4 μ m : the absorption on CO2 lines in the atmosphere is accelerated by the self-phase modulation in the Kerr nonlinearity early before the plasma channel is formed. This nonlinearly enhanced linear absorption overwhelms the plasma losses and conversion of the input pulse energy to the higher harmonics as well as the plateau.

  6. FIRST ULTRAVIOLET REFLECTANCE SPECTRA OF PLUTO AND CHARON BY THE HUBBLE SPACE TELESCOPE COSMIC ORIGINS SPECTROGRAPH: DETECTION OF ABSORPTION FEATURES AND EVIDENCE FOR TEMPORAL CHANGE

    SciTech Connect

    Stern, S. A.; Spencer, J. R.; Shinn, A.; Cunningham, N. J.; Hain, M. J.

    2012-01-15

    We have observed the mid-UV spectra of both Pluto and its large satellite, Charon, at two rotational epochs using the Hubble Space Telescope (HST) Cosmic Origins Spectrograph (COS) in 2010. These are the first HST/COS measurements of Pluto and Charon. Here we describe the observations and our reduction of them, and present the albedo spectra, average mid-UV albedos, and albedo slopes we derive from these data. These data reveal evidence for a strong absorption feature in the mid-UV spectrum of Pluto; evidence for temporal change in Pluto's spectrum since the 1990s is reported, and indirect evidence for a near-UV spectral absorption on Charon is also reported.

  7. The role of deuterium in optical activity: The CD spectrum of (S,S)-dideuteriooxirane

    SciTech Connect

    Ben-Tzur, S.; Basil, A.; Gedanken, A.

    1992-07-01

    The circular dichroism of (S,S)-[2,3-{sup 2}H{sub 2}]oxirane has been investigated in the gas phase over the 1800-1500-{angstrom} region. While the absorption spectrum reveals only two allowed transitions, the circular dichroism (CD) spectrum shows a third transition which is magnetic dipole allowed and electric dipole forbidden. The CD sign of the first excited state complies with a quadrant rule which was formulated for the oxirane chromophore. This consignate behavior is contrary to the role of deuterium in carbonyl compounds, where an antioctant behavior is observed. The signs of the CD signals of the first excited state for oxiranes with methyl or deuterium substituents located in the same quadrant are the same, in contrast to the antioctant behavior of deuterium in carbonyls. This leaves the chirality rule formulated for substituted oxiranes without any exceptions. 33 refs., 1 fig.

  8. Spectrum of solar flare protons

    NASA Astrophysics Data System (ADS)

    Podgorny, I. M.; Balabin, Yu. V.; Podgorny, A. I.; Vashenyuk, E. V.

    2010-08-01

    Most of big solar flares are accompanied by relativistic protons. The prompt component of relativistic protons moves along the interplanetary magnetic field lines and arrives at the Earth's orbit when the flare favorably located in the western solar hemisphere. The neutron monitor measurements reveal an exponential law energy spectrum. Calculations of relativistic proton acceleration in the flare current sheet with magnetic and electric fields found from 3D MHD simulations also demonstrate an exponential law spectrum. A comparison of the measured and calculated spectra permits to estimate the rate of reconnection in the Bastille flare (14 July 2000) as ˜107cm/s. The delay component of relativistic protons exhibits a power law energy spectrum.

  9. Changes in the optical absorption induced by sequential exposition to short- and long-wavelength radiation in the BTO:Al crystal

    NASA Astrophysics Data System (ADS)

    Shandarov, S. M.; Dyu, V. G.; Kisteneva, M. G.; Khudyakova, E. S.; Smirnov, S. V.; Akrestina, A. S.; Kargin, Yu F.

    2017-02-01

    Modifications of the spectral dependences of the optical absorption induced in the Bi12TiO20:Al crystal as a result of sequential exposition to cw laser radiation first with the wavelength λ g = 532 nm and then with the longer wavelength λ l,n = 588, 633, 655, 658, 663, 700, 780, 871, or 1064 nm are investigated. We revealed that after the short-wavelength exposition to radiation with λg = 532 nm, the optical absorption in the crystal increases, and in the range 470–1000 nm, yields the spectrum whose form is independent of a prehistory. The subsequent exposition to longer-wavelength radiation leads to bleaching of the crystal in the examined spectral range. A maximum diminishing of the optical absorption in the crystal is observed upon exposure to radiation with the wavelength λ l,5 = 663 nm. To describe the experimentally observed reversible changes in the optical absorption spectrum in the Bi12TiO20:Al we use the impurity absorption model that takes into account the photoinduced transitions between two metastable states of a deep defect center leading to the change of its position in the crystal lattice under conditions of strong lattice relaxation.

  10. Pharmacogenomic Study Reveals New Variants of Drug Metabolizing Enzyme and Transporter Genes Associated with Steady-State Plasma Concentrations of Risperidone and 9-Hydroxyrisperidone in Thai Autism Spectrum Disorder Patients

    PubMed Central

    Medhasi, Sadeep; Pinthong, Darawan; Pasomsub, Ekawat; Vanwong, Natchaya; Ngamsamut, Nattawat; Puangpetch, Apichaya; Chamnanphon, Monpat; Hongkaew, Yaowaluck; Pratoomwun, Jirawat; Limsila, Penkhae; Sukasem, Chonlaphat

    2016-01-01

    The present study sought to investigate the genetic variants in drug metabolizing enzyme and transporter (DMET) genes associated with steady-state plasma concentrations of risperidone among Thai autism spectrum disorder (ASD) patients. ASD patients taking risperidone for at least 1 month were enrolled for this pharmacogenomic study. Genotyping profile was obtained using Affymetrix DMET Plus array interrogating 1931 variants in 231 genes. Steady-state plasma risperidone and 9-hydroxyrisperidone were measured using liquid chromatography/tandem mass spectrometry assay. The final analysis included 483 markers for 167 genes. Six variants, ABCB11 (c.3084A > G, c.∗420A > G, c.∗368G > A, and c.∗236G > A) and ADH7 (c.690G > A and c.-5360G > A), were found to be associated with plasma concentrations of risperidone. 9-Hydroxyrisperidone and the total active-moiety levels were associated with six gene variants, SCLO1B1 (c.-11187G > A and c.521T > C), SLCO1B3 (c.334G > T, c.699A > G, and c.1557G > A), and SLC7A5 c.∗438C > G. Polymorphisms in UGT2B4 c.∗448A > G and CYP2D6 (c.1661G > C, c.4180G > C, and c.-2178G > A) showed considerable but not significant associations with metabolic ratio. This pharmacogenomic study identifies new genetic variants of DMET genes in monitoring risperidone therapy. PMID:28018217

  11. Strong broadband absorption in GaAs nanocone and nanowire arrays for solar cells.

    PubMed

    Wang, Baomin; Stevens, Erica; Leu, Paul W

    2014-03-10

    We studied the influence of geometric parameters on the optical absorption of gallium arsenide (GaAs) nanocone and nanowire arrays via finite difference time domain simulations. We optimized the structural parameters of the nanocone and nanowire arrays to maximize the ultimate efficiency across a range of lengths from 100 to 1000 nm. Nanocone arrays were found to have improved solar absorption, short-circuit current density, and ultimate efficiencies over nanowire arrays for a wide range of lengths. Detailed simulations reveal that nanocones have superior absorption due to reduced reflection from their smaller tip and reduced transmission from their larger base. Breaking the vertical mirror symmetry of nanowires results in a broader absorption spectrum such that overall efficiencies are enhanced for nanocones. We also evaluated the electric field intensity, carrier generation and angle-dependent optical properties of nanocones and nanowires. The carrier generation in nanocone arrays occurs away from the surface and is more uniform over the entire structure, which should result in less recombination losses than in nanowire arrays.

  12. Design Spectrum Analysis in NASTRAN

    NASA Technical Reports Server (NTRS)

    Butler, T. G.

    1984-01-01

    The utility of Design Spectrum Analysis is to give a mode by mode characterization of the behavior of a design under a given loading. The theory of design spectrum is discussed after operations are explained. User instructions are taken up here in three parts: Transient Preface, Maximum Envelope Spectrum, and RMS Average Spectrum followed by a Summary Table. A single DMAP ALTER packet will provide for all parts of the design spectrum operations. The starting point for getting a modal break-down of the response to acceleration loading is the Modal Transient rigid format. After eigenvalue extraction, modal vectors need to be isolated in the full set of physical coordinates (P-sized as opposed to the D-sized vectors in RF 12). After integration for transient response the results are scanned over the solution time interval for the peak values and for the times that they occur. A module called SCAN was written to do this job, that organizes these maxima into a diagonal output matrix. The maximum amplifier in each mode is applied to the eigenvector of each mode which then reveals the maximum displacements, stresses, forces and boundary reactions that the structure will experience for a load history, mode by mode. The standard NASTRAN output processors have been modified for this task. It is required that modes be normalized to mass.

  13. The electronic states of 2-furanmethanol (furfuryl alcohol) studied by photon absorption and electron impact spectroscopies

    NASA Astrophysics Data System (ADS)

    Giuliani, A.; Walker, I. C.; Delwiche, J.; Hoffmann, S. V.; Limão-Vieira, P.; Mason, N. J.; Heyne, B.; Hoebeke, M.; Hubin-Franskin, M.-J.

    2003-10-01

    The photoelectron spectrum of 2-furanmethanol (furfuryl alcohol) has been measured for ionization energies between 8 and 11.2 eV and the first three ionization bands assigned to π3, π2, and no ionizations in order of increasing binding energy. The photoabsorption spectrum has been recorded in the gas phase using both a synchrotron radiation source (5-9.91 eV, 248-125 nm) and electron energy-loss spectroscopy under electric-dipole conditions (5-10.9 eV, 248-90 nm). The (UV) absorption spectrum has also been recorded in solution (4.2-6.36 eV, 292-195 nm). The electronic excitation spectrum appears to be dominated by transitions between π and π* orbitals in the aromatic ring, leading to the conclusion that the frontier molecular orbitals of furan are affected only slightly on replacement of a H atom by the -CH2OH group. Additional experiments investigating electron impact at near-threshold energies have revealed two low-lying triplet states and at least one electron/molecule shape resonance. Dissociative electron attachment also shows to be widespread in furfuryl alcohol.

  14. Systematic determination of absolute absorption cross-section of individual carbon nanotubes.

    PubMed

    Liu, Kaihui; Hong, Xiaoping; Choi, Sangkook; Jin, Chenhao; Capaz, Rodrigo B; Kim, Jihoon; Wang, Wenlong; Bai, Xuedong; Louie, Steven G; Wang, Enge; Wang, Feng

    2014-05-27

    Optical absorption is the most fundamental optical property characterizing light-matter interactions in materials and can be most readily compared with theoretical predictions. However, determination of optical absorption cross-section of individual nanostructures is experimentally challenging due to the small extinction signal using conventional transmission measurements. Recently, dramatic increase of optical contrast from individual carbon nanotubes has been successfully achieved with a polarization-based homodyne microscope, where the scattered light wave from the nanostructure interferes with the optimized reference signal (the reflected/transmitted light). Here we demonstrate high-sensitivity absorption spectroscopy for individual single-walled carbon nanotubes by combining the polarization-based homodyne technique with broadband supercontinuum excitation in transmission configuration. To our knowledge, this is the first time that high-throughput and quantitative determination of nanotube absorption cross-section over broad spectral range at the single-tube level was performed for more than 50 individual chirality-defined single-walled nanotubes. Our data reveal chirality-dependent behaviors of exciton resonances in carbon nanotubes, where the exciton oscillator strength exhibits a universal scaling law with the nanotube diameter and the transition order. The exciton linewidth (characterizing the exciton lifetime) varies strongly in different nanotubes, and on average it increases linearly with the transition energy. In addition, we establish an empirical formula by extrapolating our data to predict the absorption cross-section spectrum for any given nanotube. The quantitative information of absorption cross-section in a broad spectral range and all nanotube species not only provides new insight into the unique photophysics in one-dimensional carbon nanotubes, but also enables absolute determination of optical quantum efficiencies in important

  15. Universal rules for visible-light absorption in hybrid perovskite materials

    NASA Astrophysics Data System (ADS)

    Kato, Masato; Fujiseki, Takemasa; Miyadera, Tetsuhiko; Sugita, Takeshi; Fujimoto, Shohei; Tamakoshi, Masato; Chikamatsu, Masayuki; Fujiwara, Hiroyuki

    2017-03-01

    A variety of organic-inorganic hybrid perovskites (APbX3) consisting of mixed center cations [A = CH3NH3+, HC(NH2)2+, and Cs+] with different PbX3- cages (X = I, Br, and Cl) have been developed to realize high-efficiency solar cells. Nevertheless, clear understanding of the effects of A and X on the optical transition has been lacking. Here, we present universal rules that allow the unified interpretation of the optical absorption in various hybrid perovskites. In particular, we find that the influence of the A-site cation on the light absorption is rather significant and the absorption coefficient (α) reduces to half when CH3NH3+ is replaced with HC(NH2)2+ in the APbI3 system. Our density functional theory calculations reproduce all of the fine absorption features observed in HC(NH2)2PbI3 and CH3NH3PbBr3, allowing the unique assignment of the interband transitions in the Brillouin zone. In contrast to general understanding that the A-site cation involves weakly in the optical process, our theoretical calculations reveal that the center cation plays a critical role in the interband transition and the absorption strength in the visible region is modified by the strong A-X interaction. Furthermore, our systematic analyses show that the variation of the absorption spectrum with X can be described simply by the well-known sum rule. The universal rules established in this study explain the large reduction of α in HC(NH2)2PbI3 and predict CsPbI3 as the highest α material.

  16. Direct and quantitative broadband absorptance spectroscopy with multilayer cantilever probes

    DOEpatents

    Hsu, Wei-Chun; Tong, Jonathan Kien-Kwok; Liao, Bolin; Chen, Gang

    2015-04-21

    A system for measuring the absorption spectrum of a sample is provided that includes a broadband light source that produces broadband light defined within a range of an absorptance spectrum. An interferometer modulates the intensity of the broadband light source for a range of modulation frequencies. A bi-layer cantilever probe arm is thermally connected to a sample arm having at most two layers of materials. The broadband light modulated by the interferometer is directed towards the sample and absorbed by the sample and converted into heat, which causes a temperature rise and bending of the bi-layer cantilever probe arm. A detector mechanism measures and records the deflection of the probe arm so as to obtain the absorptance spectrum of the sample.

  17. Solar absorption surface panel

    DOEpatents

    Santala, Teuvo J.

    1978-01-01

    A composite metal of aluminum and nickel is used to form an economical solar absorption surface for a collector plate wherein an intermetallic compound of the aluminum and nickel provides a surface morphology with high absorptance and relatively low infrared emittance along with good durability.

  18. Rectal absorption of propylthiouracil.

    PubMed

    Bartle, W R; Walker, S E; Silverberg, J D

    1988-06-01

    The rectal absorption of propylthiouracil (PTU) was studied and compared to oral absorption in normal volunteers. Plasma levels of PTU after administration of suppositories of PTU base and PTU diethanolamine were significantly lower compared to the oral route. Elevated plasma reverse T3 levels were demonstrated after each treatment, however, suggesting a desirable therapeutic effect at this dosage level for all preparations.

  19. Fourier transform infrared spectroscopy measurements of multi-phonon and free-carrier absorption in ZnO

    DOE PAGES

    Saadatkia, Pooneh; Ariyawansa, G.; Leedy, K. D.; ...

    2016-10-21

    Fourier transform infrared (FTIR) measurements were carried out on thin films and bulk single crystals of ZnO over a wide temperature range to study the free-carrier and multi-phonon infrared absorptions and the effects of hydrogen incorporation on these properties. Aluminum-doped ZnO thin films were deposited on quartz substrates using atomic-layer deposition (ALD) and sol–gel methods. Hall-effect measurements showed that the ALD films have a resistivity of ρ = 1.11 × 10–3 Ω cm, three orders of magnitude lower than sol–gel films (ρ = 1.25 Ω cm). This result is consistent with the significant difference in their free-carrier absorption as revealedmore » by FTIR spectra obtained at room temperature. By reducing the temperature to 80 K, the free carriers were frozen out, and their absorption spectrum was suppressed. From the FTIR measurements on ZnO single crystals that were grown by the chemical vapor transport method, we identified a shoulder around 3350 cm–1 and associated it with the presence of two or more hydrogen ions in a Zn vacancy. After reducing the hydrogen level in the crystal, the measurements revealed the multi-phonon absorption of ZnO in the range of 700–1200 cm–1. Furthermore, this study shows that the multi-phonon absorption bands can be completely masked by the presence of a large concentration of hydrogen in the crystals.« less