Correlation of ground motion and intensity for the 17 January 1994 Northridge, California, earthquake

USGS Publications Warehouse

Boatwright, J.; Thywissen, K.; Seekins, L.C.

2001-01-01

We analyze the correlations between intensity and a set of groundmotion parameters obtained from 66 free-field stations in Los Angeles County that recorded the 1994 Northridge earthquake. We use the tagging intensities from Thywissen and Boatwright (1998) because these intensities are determined independently on census tracts, rather than interpolated from zip codes, as are the modified Mercalli isoseismals from Dewey et al. (1995). The ground-motion parameters we consider are the peak ground acceleration (PGA), the peak ground velocity (PGV), the 5% damped pseudovelocity response spectral (PSV) ordinates at 14 periods from 0.1 to 7.5 sec, and the rms average of these spectral ordinates from 0.3 to 3 sec. Visual comparisons of the distribution of tagging intensity with contours of PGA, PGV, and the average PSV suggest that PGV and the average PSV are better correlated with the intensity than PGA. The correlation coefficients between the intensity and the ground-motion parameters bear this out: r = 0.75 for PGA, 0.85 for PGV, and 0.85 for the average PSV. Correlations between the intensity and the PSV ordinates, as a function of period, are strongest at 1.5 sec (r = 0.83) and weakest at 0.2 sec (r = 0.66). Regressing the intensity on the logarithms of these ground-motion parameters yields relations I ?? mlog?? with 3.0 ??? m ??? 5.2 for the parameters analyzed, where m = 4.4 ?? 0.7 for PGA, 3.4 ?? 0.4 for PGV, and 3.6 ?? 0.5 for the average PSV.

Ground-motion prediction from tremor

USGS Publications Warehouse

Baltay, Annemarie S.; Beroza, Gregory C.

2013-01-01

The widespread occurrence of tremor, coupled with its frequency content and location, provides an exceptional opportunity to test and improve strong ground-motion attenuation relations for subduction zones. We characterize the amplitude of thousands of individual 5 min tremor events in Cascadia during three episodic tremor and slip events to constrain the distance decay of peak ground acceleration (PGA) and peak ground velocity (PGV). We determine the anelastic attenuation parameter for ground-motion prediction equations (GMPEs) to a distance of 150 km, which is sufficient to place important constraints on ground-motion decay. Tremor PGA and PGV show a distance decay that is similar to subduction-zone-specific GMPEs developed from both data and simulations; however, the massive amount of data present in the tremor observations should allow us to refine distance-amplitude attenuation relationships for use in hazard maps, and to search for regional variations and intrasubduction zone differences in ground-motion attenuation.

A comparative study of different PGA attenuation and error models: Case of 1999 Chi-Chi earthquake

NASA Astrophysics Data System (ADS)

Mebarki, Ahmed

2009-03-01

In order to evaluate the horizontal peak ground acceleration (HPGA) during earthquakes, the author studies the respective efficiency of two existing attenuation models [Mébarki, A., 2003a, Risques sismiques: aléas, vulnérabilité et aide à la décision par cartes SIG. Proceedings of International Conference on "Risks, Vulnerability and Reliability in Construction. Towards a reduction of disasters". ISBN: 9961-891-01-5, pp. 82-97. Algiers, October 11-12, Mébarki, A., 2003b. Proposal of a parametric attenuation model and comparison with some worldwide earthquakes. VII o Congreso Venezolano de Sismologia y Ingenieria Sísmica, Barquisimeto, Venezuela. November 12-13, (CD-ROM), Mébarki A., 2004. Modèle d'atténuation sismique: prédiction probabiliste des pics d'accélération, RFGC — Revue Française de Génie Civil, Hermès Ed., 8 (9-10), 1071-1086]. A comparative study of their performances is done in the case of 1999 Chi-Chi earthquake (Taiwan). The reported PGA (Peak Ground Accelerations) values correspond to hypocentral distances ranging from 15 up to 180 km with observed acceleration peaks ranging from (0.04 g) up to (1.16 g). The author considers two kinds of probabilistic distributions for the error model in order to describe the uncertainty and the variability that affect the values of the PGA: a Gamma distribution and a Log-normal distribution. The adopted error models assume that the variability of the PGA is such that its coefficient of variation is equal to 55% [Mébarki, A., 2003a. Risques sismiques: aléas, vulnérabilité et aide à la décision par cartes SIG. Proceedings of International Conference on "Risks, Vulnerability and Reliability in Construction. Towards a reduction of disasters". ISBN: 9961-891-01-5, pp. 82-97. Algiers, October 11-12, Mébarki, A., 2003b. Proposal of a parametric attenuation model and comparison with some worldwide earthquakes. VII o Congreso Venezolano de Sismologia y Ingenieria Sísmica, Barquisimeto, Venezuela. November 12-13, (CD-ROM), Mébarki, A., 2004. Modèle d'atténuation sismique: prédiction probabiliste des pics d'accélération, RFGC — Revue Française de Génie Civil, Hermès Ed., 8 (9-10), 1071-1086]. The obtained results show that both attenuation models provide adequate values of the PGA when a Gamma distribution is adopted for the error model. The attenuation models efficiency decreases slightly when a Log-normal distribution is adopted for the error model.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Klein, Fred W.

A significant seismic hazard exists in south Hawaii from large tectonic earthquakes that can reach magnitude 8 and intensity XII. This paper quantifies the hazard by estimating the horizontal peak ground acceleration (PGA) in south Hawaii which occurs with a 90% probability of not being exceeded during exposure times from 10 to 250 years. The largest earthquakes occur beneath active, unbuttressed and mobile flanks of volcanoes in their shield building stage.

Ground-motion prediction equations for the average horizontal component of PGA, PGV, and 5%-damped PSA at spectral periods between 0.01 s and 10.0 s

USGS Publications Warehouse

Boore, D.M.; Atkinson, G.M.

2008-01-01

This paper contains ground-motion prediction equations (GMPEs) for average horizontal-component ground motions as a function of earthquake magnitude, distance from source to site, local average shear-wave velocity, and fault type. Our equations are for peak ground acceleration (PGA), peak ground velocity (PGV), and 5%-damped pseudo-absolute-acceleration spectra (PSA) at periods between 0.01 s and 10 s. They were derived by empirical regression of an extensive strong-motion database compiled by the 'PEER NGA' (Pacific Earthquake Engineering Research Center's Next Generation Attenuation) project. For periods less than 1 s, the analysis used 1,574 records from 58 mainshocks in the distance range from 0 km to 400 km (the number of available data decreased as period increased). The primary predictor variables are moment magnitude (M), closest horizontal distance to the surface projection of the fault plane (RJB), and the time-averaged shear-wave velocity from the surface to 30 m (VS30). The equations are applicable for M=5-8, RJB<200 km, and VS30= 180-1300 m/s. ?? 2008, Earthquake Engineering Research Institute.

Seismic hazard assessment of the Province of Murcia (SE Spain): analysis of source contribution to hazard

NASA Astrophysics Data System (ADS)

García-Mayordomo, J.; Gaspar-Escribano, J. M.; Benito, B.

2007-10-01

A probabilistic seismic hazard assessment of the Province of Murcia in terms of peak ground acceleration (PGA) and spectral accelerations [SA( T)] is presented in this paper. In contrast to most of the previous studies in the region, which were performed for PGA making use of intensity-to-PGA relationships, hazard is here calculated in terms of magnitude and using European spectral ground-motion models. Moreover, we have considered the most important faults in the region as specific seismic sources, and also comprehensively reviewed the earthquake catalogue. Hazard calculations are performed following the Probabilistic Seismic Hazard Assessment (PSHA) methodology using a logic tree, which accounts for three different seismic source zonings and three different ground-motion models. Hazard maps in terms of PGA and SA(0.1, 0.2, 0.5, 1.0 and 2.0 s) and coefficient of variation (COV) for the 475-year return period are shown. Subsequent analysis is focused on three sites of the province, namely, the cities of Murcia, Lorca and Cartagena, which are important industrial and tourism centres. Results at these sites have been analysed to evaluate the influence of the different input options. The most important factor affecting the results is the choice of the attenuation relationship, whereas the influence of the selected seismic source zonings appears strongly site dependant. Finally, we have performed an analysis of source contribution to hazard at each of these cities to provide preliminary guidance in devising specific risk scenarios. We have found that local source zones control the hazard for PGA and SA( T ≤ 1.0 s), although contribution from specific fault sources and long-distance north Algerian sources becomes significant from SA(0.5 s) onwards.

Probabilistic Relationships between Ground‐Motion Parameters and Modified Mercalli Intensity in California

USGS Publications Warehouse

Worden, C.B.; Wald, David J.; Rhoades, D.A.

2012-01-01

We use a database of approximately 200,000 modified Mercalli intensity (MMI) observations of California earthquakes collected from USGS "Did You Feel It?" (DYFI) reports, along with a comparable number of peak ground-motion amplitudes from California seismic networks, to develop probabilistic relationships between MMI and peak ground velocity (PGV), peak ground acceleration (PGA), and 0.3-s, 1-s, and 3-s 5% damped pseudospectral acceleration (PSA). After associating each ground-motion observation with an MMI computed from all the DYFI responses within 2 km of the observation, we derived a joint probability distribution between MMI and ground motion. We then derived reversible relationships between MMI and each ground-motion parameter by using a total least squares regression to fit a bilinear function to the median of the stacked probability distributions. Among the relationships, the fit to peak ground velocity has the smallest errors, though linear combinations of PGA and PGV give nominally better results. We also find that magnitude and distance terms reduce the overall residuals and are justifiable on an information theoretic basis. For intensities MMI≥5, our results are in close agreement with the relations of Wald, Quitoriano, Heaton, and Kanamori (1999); for lower intensities, our results fall midway between Wald, Quitoriano, Heaton, and Kanamori (1999) and those of Atkinson and Kaka (2007). The earthquakes in the study ranged in magnitude from 3.0 to 7.3, and the distances ranged from less than a kilometer to about 400 km from the source.

B-value and slip rate sensitivity analysis for PGA value in Lembang fault and Cimandiri fault area

NASA Astrophysics Data System (ADS)

Pratama, Cecep; Ito, Takeo; Meilano, Irwan; Nugraha, Andri Dian

2017-07-01

We examine slip rate and b-value contribution of Peak Ground Acceleration (PGA), in probabilistic seismic hazard maps (10% probability of exceedence in 50 years or 500 years return period). Hazard curve of PGA have been investigated for Sukabumi and Bandung using a PSHA (Probabilistic Seismic Hazard Analysis). We observe that the most influence in the hazard estimate is crustal fault. Monte Carlo approach has been developed to assess the sensitivity. Uncertainty and coefficient of variation from slip rate and b-value in Lembang and Cimandiri Fault area have been calculated. We observe that seismic hazard estimates are sensitive to fault slip rate and b-value with uncertainty result are 0.25 g dan 0.1-0.2 g, respectively. For specific site, we found seismic hazard estimate are 0.49 + 0.13 g with COV 27% and 0.39 + 0.05 g with COV 13% for Sukabumi and Bandung, respectively.

Evaluation of Horizontal Seismic Hazard of Shahrekord, Iran

DOE Office of Scientific and Technical Information (OSTI.GOV)

Amiri, G. Ghodrati; Dehkordi, M. Raeisi; Amrei, S. A. Razavian

2008-07-08

This paper presents probabilistic horizontal seismic hazard assessment of Shahrekord, Iran. It displays the probabilistic estimate of Peak Ground Horizontal Acceleration (PGHA) for the return period of 75, 225, 475 and 2475 years. The output of the probabilistic seismic hazard analysis is based on peak ground acceleration (PGA), which is the most common criterion in designing of buildings. A catalogue of seismic events that includes both historical and instrumental events was developed and covers the period from 840 to 2007. The seismic sources that affect the hazard in Shahrekord were identified within the radius of 150 km and the recurrencemore » relationships of these sources were generated. Finally four maps have been prepared to indicate the earthquake hazard of Shahrekord in the form of iso-acceleration contour lines for different hazard levels by using SEISRISK III software.« less

Seismic hazard analysis with PSHA method in four cities in Java.

NASA Astrophysics Data System (ADS)

Elistyawati, Y.; Palupi, I. R.; Suharsono

2016-11-01

In this study the tectonic earthquakes was observed through the peak ground acceleration through the PSHA method by dividing the area of the earthquake source. This study applied the earthquake data from 1965 - 2015 that has been analyzed the completeness of the data, location research was the entire Java with stressed in four large cities prone to earthquakes. The results were found to be a hazard map with a return period of 500 years, 2500 years return period, and the hazard curve were four major cities (Jakarta, Bandung, Yogyakarta, and the city of Banyuwangi). Results Java PGA hazard map 500 years had a peak ground acceleration within 0 g ≥ 0.5 g, while the return period of 2500 years had a value of 0 to ≥ 0.8 g. While, the PGA hazard curves on the city's most influential source of the earthquake was from sources such as fault Cimandiri backgroud, for the city of Bandung earthquake sources that influence the seismic source fault dent background form. In other side, the city of Yogyakarta earthquake hazard curve of the most influential was the source of the earthquake background of the Opak fault, and the most influential hazard curve of Banyuwangi earthquake was the source of Java and Sumba megatruts earthquake.

Ground motion observations of the 2014 South Napa earthquake

USGS Publications Warehouse

Baltay, Annemarie S.; Boatwright, John

2015-01-01

Using the ground‐motion data compiled and reported by ShakeMap (Wald et al., 2000), we examine the peak ground acceleration (PGA) and peak ground velocity (PGV), as well as the pseudospectral acceleration (PSA) at periods of 0.3, 1.0, and 3.0 s. At the higher frequencies, especially PGA, data recorded at close distances (within ∼20  km) are very consistent with the GMPEs, implying a stress drop for this event similar to the median for California, that is, 5 MPa (Baltay and Hanks, 2014). At all frequencies, the attenuation with distance is stronger than the GMPEs would predict, which suggests the attenuation in the Napa and San Francisco Bay delta region is stronger than the average attenuation in California. The spatial plot of the ground‐motion residuals is positive to the north, in both Napa and Sonoma Valleys, consistent with increases in amplitude expected from both the directivity and basin effects. More interestingly, perhaps, there is strong ground motion to the south in the along‐strike direction, particularly for PSA at 1.0 s. These strongly positive residuals align with an older, Quaternary fault structure associated with the Franklin or Southampton fault, potentially indicating a fault‐zone‐guided wave.

An alternative approach to probabilistic seismic hazard analysis in the Aegean region using Monte Carlo simulation

NASA Astrophysics Data System (ADS)

Weatherill, Graeme; Burton, Paul W.

2010-09-01

The Aegean is the most seismically active and tectonically complex region in Europe. Damaging earthquakes have occurred here throughout recorded history, often resulting in considerable loss of life. The Monte Carlo method of probabilistic seismic hazard analysis (PSHA) is used to determine the level of ground motion likely to be exceeded in a given time period. Multiple random simulations of seismicity are generated to calculate, directly, the ground motion for a given site. Within the seismic hazard analysis we explore the impact of different seismic source models, incorporating both uniform zones and distributed seismicity. A new, simplified, seismic source model, derived from seismotectonic interpretation, is presented for the Aegean region. This is combined into the epistemic uncertainty analysis alongside existing source models for the region, and models derived by a K-means cluster analysis approach. Seismic source models derived using the K-means approach offer a degree of objectivity and reproducibility into the otherwise subjective approach of delineating seismic sources using expert judgment. Similar review and analysis is undertaken for the selection of peak ground acceleration (PGA) attenuation models, incorporating into the epistemic analysis Greek-specific models, European models and a Next Generation Attenuation model. Hazard maps for PGA on a "rock" site with a 10% probability of being exceeded in 50 years are produced and different source and attenuation models are compared. These indicate that Greek-specific attenuation models, with their smaller aleatory variability terms, produce lower PGA hazard, whilst recent European models and Next Generation Attenuation (NGA) model produce similar results. The Monte Carlo method is extended further to assimilate epistemic uncertainty into the hazard calculation, thus integrating across several appropriate source and PGA attenuation models. Site condition and fault-type are also integrated into the hazard mapping calculations. These hazard maps are in general agreement with previous maps for the Aegean, recognising the highest hazard in the Ionian Islands, Gulf of Corinth and Hellenic Arc. Peak Ground Accelerations for some sites in these regions reach as high as 500-600 cm s -2 using European/NGA attenuation models, and 400-500 cm s -2 using Greek attenuation models.

A unified classification model for modeling of seismic liquefaction potential of soil based on CPT

PubMed Central

Samui, Pijush; Hariharan, R.

2014-01-01

The evaluation of liquefaction potential of soil due to an earthquake is an important step in geosciences. This article examines the capability of Minimax Probability Machine (MPM) for the prediction of seismic liquefaction potential of soil based on the Cone Penetration Test (CPT) data. The dataset has been taken from Chi–Chi earthquake. MPM is developed based on the use of hyperplanes. It has been adopted as a classification tool. This article uses two models (MODEL I and MODEL II). MODEL I employs Cone Resistance (qc) and Cyclic Stress Ratio (CSR) as input variables. qc and Peak Ground Acceleration (PGA) have been taken as inputs for MODEL II. The developed MPM gives 100% accuracy. The results show that the developed MPM can predict liquefaction potential of soil based on qc and PGA. PMID:26199749

A unified classification model for modeling of seismic liquefaction potential of soil based on CPT.

PubMed

Samui, Pijush; Hariharan, R

2015-07-01

The evaluation of liquefaction potential of soil due to an earthquake is an important step in geosciences. This article examines the capability of Minimax Probability Machine (MPM) for the prediction of seismic liquefaction potential of soil based on the Cone Penetration Test (CPT) data. The dataset has been taken from Chi-Chi earthquake. MPM is developed based on the use of hyperplanes. It has been adopted as a classification tool. This article uses two models (MODEL I and MODEL II). MODEL I employs Cone Resistance (q c) and Cyclic Stress Ratio (CSR) as input variables. q c and Peak Ground Acceleration (PGA) have been taken as inputs for MODEL II. The developed MPM gives 100% accuracy. The results show that the developed MPM can predict liquefaction potential of soil based on q c and PGA.

Global evaluation of erosion rates in relation to tectonics

NASA Astrophysics Data System (ADS)

Hecht, Hagar; Oguchi, Takashi

2017-12-01

Understanding the mechanisms and controlling factors of erosion rates is essential in order to sufficiently comprehend bigger processes such as landscape evolution. For decades, scientists have been researching erosion rates where one of the main objectives was to find the controlling factors. A variety of parameters have been suggested ranging from climate-related, basin morphometry and the tectonic setting of an area. This study focuses on the latter. We use previously published erosion rate data obtained mainly using 10Be and sediment yield and sediment yield data published by the United States Geological Survey. We correlate these data to tectonic-related factors, i.e., distance to tectonic plate boundary, peak ground acceleration ( PGA), and fault distribution. We also examine the relationship between erosion rate and mean basin slope and find significant correlations of erosion rates with distance to tectonic plate boundary, PGA, and slope. The data are binned into high, medium, and low values of each of these parameters and grouped in all combinations. We find that groups with a combination of high PGA (> 0.2.86 g) and long distance (> 1118.69 km) or low PGA (< 0.68 g) and short distance (< 94.34 km) are almost inexistent suggesting a strong coupling between PGA and distance to tectonic plate boundary. Groups with low erosion rates include long distance and/or low PGA, and groups with high erosion rates include neither of these. These observations indicate that tectonics plays a major role in determining erosion rates, which is partly ascribable to steeper slopes produced by active crustal movements. However, our results show no apparent correlation of slope with erosion rates, pointing to problems with using mean basin-wide slope as a slope indicator because it does not represent the complex slope distribution within a basin.

SENSITIVITY OF STRUCTURAL RESPONSE TO GROUND MOTION SOURCE AND SITE PARAMETERS.

USGS Publications Warehouse

Safak, Erdal; Brebbia, C.A.; Cakmak, A.S.; Abdel Ghaffar, A.M.

1985-01-01

Designing structures to withstand earthquakes requires an accurate estimation of the expected ground motion. While engineers use the peak ground acceleration (PGA) to model the strong ground motion, seismologists use physical characteristics of the source and the rupture mechanism, such as fault length, stress drop, shear wave velocity, seismic moment, distance, and attenuation. This study presents a method for calculating response spectra from seismological models using random vibration theory. It then investigates the effect of various source and site parameters on peak response. Calculations are based on a nonstationary stochastic ground motion model, which can incorporate all the parameters both in frequency and time domains. The estimation of the peak response accounts for the effects of the non-stationarity, bandwidth and peak correlations of the response.

Hair dye-incorporated poly-γ-glutamic acid/glycol chitosan nanoparticles based on ion-complex formation.

PubMed

Lee, Hye-Young; Jeong, Young-Il; Choi, Ki-Choon

2011-01-01

p-Phenylenediamine (PDA) or its related chemicals are used more extensively than oxidative hair dyes. However, permanent hair dyes such as PDA are known to have potent contact allergy reactions in humans, and severe allergic reactions are problematic. PDA-incorporated nanoparticles were prepared based on ion-complex formation between the cationic groups of PDA and the anionic groups of poly(γ-glutamic acid) (PGA). To reinforce PDA/PGA ion complexes, glycol chitosan (GC) was added. PDA-incorporated nanoparticles were characterized using field-emission scanning electron microscopy, Fourier- transform infrared (FT-IR) spectroscopy, dynamic light scattering, and powder X-ray diffractometry (XRD). Nanoparticles were formed by ion-complex formation between the amine groups of PDA and the carboxyl groups of PGA. PDA-incorporated nanoparticles are small in size (<100 nm), and morphological observations showed spherical shapes. FT-IR spectra results showed that the carboxylic acid peak of PGA decreased with increasing PDA content, indicating that the ion complexes were formed between the carboxyl groups of PGA and the amine groups of PDA. Furthermore, the intrinsic peak of the carboxyl groups of PGA was also decreased by the addition of GC. Intrinsic crystalline peaks of PDA were observed by XRD. This crystalline peak of PDA was completely nonexistent when nanoparticles were formed by ion complex between PDA, PGA, and GC, indicating that PDA was complexed with PGA and no free drug existed in the formulation. During the drug-release experiment, an initial burst release of PDA was observed, and then PDA was continuously released over 1 week. Cytotoxicity testing against HaCaT human skin keratinocyte cells showed PDA-incorporated nanoparticles had lower toxicity than PDA itself. Furthermore, PDA-incorporated nanoparticles showed reduced apoptosis and necrosis reaction at HaCaT cells. The authors suggest that these microparticles are ideal candidates for a vehicle for decreasing side effects of hair dye.

Reassessment of probabilistic seismic hazard in the Marmara region

USGS Publications Warehouse

Kalkan, Erol; Gulkan, Polat; Yilmaz, Nazan; Çelebi, Mehmet

2009-01-01

In 1999, the eastern coastline of the Marmara region (Turkey) witnessed increased seismic activity on the North Anatolian fault (NAF) system with two damaging earthquakes (M 7.4 Kocaeli and M 7.2 D??zce) that occurred almost three months apart. These events have reduced stress on the western segment of the NAF where it continues under the Marmara Sea. The undersea fault segments have been recently explored using bathymetric and reflection surveys. These recent findings helped scientists to understand the seismotectonic environment of the Marmara basin, which has remained a perplexing tectonic domain. On the basis of collected new data, seismic hazard of the Marmara region is reassessed using a probabilistic approach. Two different earthquake source models: (1) the smoothed-gridded seismicity model and (2) fault model and alternate magnitude-frequency relations, Gutenberg-Richter and characteristic, were used with local and imported ground-motion-prediction equations. Regional exposure is computed and quantified on a set of hazard maps that provide peak horizontal ground acceleration (PGA) and spectral acceleration at 0.2 and 1.0 sec on uniform firm-rock site condition (760 m=sec average shear wave velocity in the upper 30 m). These acceleration levels were computed for ground motions having 2% and 10% probabilities of exceedance in 50 yr, corresponding to return periods of about 2475 and 475 yr, respectively. The maximum PGA computed (at rock site) is 1.5g along the fault segments of the NAF zone extending into the Marmara Sea. The new maps generally show 10% to 15% increase for PGA, 0.2 and 1.0 sec spectral acceleration values across much of Marmara compared to previous regional hazard maps. Hazard curves and smooth design spectra for three site conditions: rock, soil, and soft-soil are provided for the Istanbul metropolitan area as possible tools in future risk estimates.

A spatio-temporal model for probabilistic seismic hazard zonation of Tehran

NASA Astrophysics Data System (ADS)

Hashemi, Mahdi; Alesheikh, Ali Asghar; Zolfaghari, Mohammad Reza

2013-08-01

A precondition for all disaster management steps, building damage prediction, and construction code developments is a hazard assessment that shows the exceedance probabilities of different ground motion levels at a site considering different near- and far-field earthquake sources. The seismic sources are usually categorized as time-independent area sources and time-dependent fault sources. While the earlier incorporates the small and medium events, the later takes into account only the large characteristic earthquakes. In this article, a probabilistic approach is proposed to aggregate the effects of time-dependent and time-independent sources on seismic hazard. The methodology is then applied to generate three probabilistic seismic hazard maps of Tehran for 10%, 5%, and 2% exceedance probabilities in 50 years. The results indicate an increase in peak ground acceleration (PGA) values toward the southeastern part of the study area and the PGA variations are mostly controlled by the shear wave velocities across the city. In addition, the implementation of the methodology takes advantage of GIS capabilities especially raster-based analyses and representations. During the estimation of the PGA exceedance rates, the emphasis has been placed on incorporating the effects of different attenuation relationships and seismic source models by using a logic tree.

Some Key Features of the Strong-Motion Data from the M 6.0 Parkfield, California, Earthquake of 28 September 2004

USGS Publications Warehouse

Shakal, A.; Haddadi, H.; Graizer, V.; Lin, K.; Huang, M.

2006-01-01

The 2004 Parkfield, California, earthquake was recorded by an extensive set of strong-motion instruments well positioned to record details of the motion in the near-fault region, where there has previously been very little recorded data. The strong-motion measurements obtained are highly varied, with significant variations occurring over only a few kilometers. The peak accelerations in the near fault region range from 0.13g to over 1.8g (one of the highest acceleration recorded to date, exceeding the capacity of the recording instrument The largest accelerations occurred near the northwest end of the inferred rupture zone. These motions are consistent with directivity for a fault rupturing from the hypocenter near Gold Hill toward the northwest. However, accelerations up to 0.8g were also observed in the opposite direction, at the south end of the Cholame Valley near Highway 41, consistent with bilateral rupture, with rupture southeast of the hypocenter. Several stations near and over the rupturing fault recorded relatively weak motions, consistent with seemingly paradoxical observations of low shaking damage near strike-slip faults. This event had more ground-motion observations within 10 km of the fault than many other earthquakes combined. At moderate distances peak horizontal ground acceleration (PGA) values dropped off more rapidly with distance than standard relationships. At close-in distance the wide variation of PGA suggests a distance-dependent sigma may be important to consider. The near-fault ground-motion variation is greater than that assumed in ShakeMap interpolations, based on the existing set of observed data. Higher density of stations near faults may be the only means in the near future to reduce uncertainty in the interpolations. Outside of the near-fault zone the variance is closer to that assumed. This set of data provides the first case where near-fault radiation has been observed at an adequate number of stations around the fault to allow detailed study of the fault-normal and fault-parallel motion and the near-field S-wave radiation. The fault-normal motions are significant, but they are not large at the central part of the fault, away from the ends. The fault-normal and fault-parallel motions drop off quite rapidly with distance from the fault. Analysis of directivity indicates increased values of peak velocity in the rupture direction. No such dependence is observed in the peak acceleration, except for stations close to the strike of the fault near and beyond the ends of the faulting.

Seismic Intensity, PGA and PGV for the South Napa Earthquake, August 24, 2014

NASA Astrophysics Data System (ADS)

Chen, S.; Pickering, A.; Mooney, W. D.; Crewdson, E.

2014-12-01

Numerous studies have investigated the statistical relationship between Modified Mercalli Intensity (MMI) and peak ground acceleration (PGA) and peak ground velocity (PGV). The Mw 6.0 South Napa (California) earthquake of August 24, 2014 provides valuable data to examine these relationships for both urban and rural environments within northern California. The finite fault model (D. Dreger, 2014) indicates that the fault rupture propagated predominantly NNW and up-dip from a 11-km-deep hypocenter. The epicentral location was 8 km SSW of downtown Napa. Recorded PGA north of the epicenter is as high as 600 cm/s2 and PGV locally reaches 80 cm/s. Field studies by two teams of investigators were conducted on August 24-26 and September 8-11, 2014 to assign MMI values at 108 sites. The highest MMI values are strongly localized along the NNW-SSE rupture trend north of the epicenter. Parts of the city of Napa and some communities several km farther north on Dry Creek Road were found to have experienced shaking intensities of MMI VII to VIII. The observed effects include houses moved off their foundations, chimney collapse or damage, cracked foundations and/or interior walls, broken windows, and the lateral displacement of heavy furniture. Communities to the east and west of this zone of high seismic intensity reported significantly lower values of MMI, typically IV and V even at distances as close as 10 km from the mapped surface rupture. In comparison with previous estimates by Wald et al. (1999) and Dangkua and Cramer (2011), we find that MMI III-VIII uniformly correspond to significantly larger (>150%) PGA and PGV values, as reported by the Center for Engineering Strong Motion Data (2014). We attribute this observation to two primary factors: (1) improved earthquake engineering in the post-Loma Prieta earthquake era that has led to building construction, both new and retrofitted, that is more resistant to earthquake strong ground motions; and (2) a frequency band relevant to these MMI estimates that contains less energy than that leading to the PGA or PGV values. The latter would primarily be a source effect.

Review: Progress in rotational ground-motion observations from explosions and local earthquakes in Taiwan

USGS Publications Warehouse

Lee, William H K.; Huang, Bor-Shouh; Langston, Charles A.; Lin, Chin-Jen; Liu, Chun-Chi; Shin, Tzay-Chyn; Teng, Ta-Liang; Wu, Chien-Fu

2009-01-01

Rotational motions generated by large earthquakes in the far field have been successfully measured, and observations agree well with the classical elasticity theory. However, recent rotational measurements in the near field of earthquakes in Japan and in Taiwan indicate that rotational ground motions are 10 to 100 times larger than expected from the classical elasticity theory. The near-field strong-motion records of the 1999 Mw 7.6 Chi-Chi, Taiwan, earthquake suggest that the ground motions along the 100 km rupture are complex. Some rather arbitrary baseline corrections are necessary in order to obtain reasonable displacement values from double integration of the acceleration data. Because rotational motions can contaminate acceleration observations due to the induced perturbation of the Earth’s gravitational field, we started a modest program to observe rotational ground motions in Taiwan.Three papers have reported the rotational observations in Taiwan: (1) at the HGSD station (Liu et al., 2009), (2) at the N3 site from two TAiwan Integrated GEodynamics Research (TAIGER) explosions (Lin et al., 2009), and (3) at the Taiwan campus of the National Chung-Cheng University (NCCU) (Wu et al., 2009). In addition, Langston et al. (2009) reported the results of analyzing the TAIGER explosion data. As noted by several authors before, we found a linear relationship between peak rotational rate (PRR in mrad/sec) and peak ground acceleration (PGA in m/sec2) from local earthquakes in Taiwan, PRR=0.002+1.301 PGA, with a correlation coefficient of 0.988.

Scaling A Moment-Rate Function For Small To Large Magnitude Events

NASA Astrophysics Data System (ADS)

Archuleta, Ralph; Ji, Chen

2017-04-01

Since the 1980's seismologists have recognized that peak ground acceleration (PGA) and peak ground velocity (PGV) scale differently with magnitude for large and moderate earthquakes. In a recent paper (Archuleta and Ji, GRL 2016) we introduced an apparent moment-rate function (aMRF) that accurately predicts the scaling with magnitude of PGA, PGV, PWA (Wood-Anderson Displacement) and the ratio PGA/2πPGV (dominant frequency) for earthquakes 3.3 ≤ M ≤ 5.3. This apparent moment-rate function is controlled by two temporal parameters, tp and td, which are related to the time for the moment-rate function to reach its peak amplitude and the total duration of the earthquake, respectively. These two temporal parameters lead to a Fourier amplitude spectrum (FAS) of displacement that has two corners in between which the spectral amplitudes decay as 1/f, f denotes frequency. At higher or lower frequencies, the FAS of the aMRF looks like a single-corner Aki-Brune omega squared spectrum. However, in the presence of attenuation the higher corner is almost certainly masked. Attempting to correct the spectrum to an Aki-Brune omega-squared spectrum will produce an "apparent" corner frequency that falls between the double corner frequency of the aMRF. We reason that the two corners of the aMRF are the reason that seismologists deduce a stress drop (e.g., Allmann and Shearer, JGR 2009) that is generally much smaller than the stress parameter used to produce ground motions from stochastic simulations (e.g., Boore, 2003 Pageoph.). The presence of two corners for the smaller magnitude earthquakes leads to several questions. Can deconvolution be successfully used to determine scaling from small to large earthquakes? Equivalently will large earthquakes have a double corner? If large earthquakes are the sum of many smaller magnitude earthquakes, what should the displacement FAS look like for a large magnitude earthquake? Can a combination of such a double-corner spectrum and random vibration theory explain the PGA, PGV scaling relationships for larger magnitude?

Ground motions at the outermost limits of seismically triggered landslides

NASA Astrophysics Data System (ADS)

Jibson, Randall W.; Harp, Edwin L.

2016-04-01

Over the last few decades, we and our colleagues have conducted field investigations in which we mapped the outermost limits of triggered landslides in four earthquakes: 1987 Whittier Narrows, California (M 5.9), 1987 Superstition Hills, California (M 6.5), 1994 Northridge, California (M 6.7), and 2011 Mineral, Virginia (M 5.8). In an additional two earthquakes, 1976 Guatemala (M 7.5) and 1983 Coalinga, California (M 6.5), we determined limits using high-resolution aerial photographic interpretation in conjunction with more limited ground investigation. Limits in these earthquakes were defined by the locations of the very smallest failures (< 1 m^3) from the most susceptible slopes that can be identified positively as having been triggered by earthquake shaking. Because we and our colleagues conducted all of these investigations, consistent methodology and criteria were used in determining limits. In the six earthquakes examined, we correlated the outermost landslide limits with peak ground accelerations (PGA) from ShakeMap models of each earthquake. For the four earthquakes studied by field investigation, the minimum PGA values associated with farthest landslide limits ranged from 0.02-0.08 g. The range for the two earthquakes investigated using aerial photographic interpretations was 0.05-0.11 g. Although PGA values at landslide limits depend on several factors - including material strength, topographic amplification, and hydrologic conditions - these values provide an empirically useful lower limiting range of PGA needed to trigger the smallest failures on very susceptible slopes. In a well-recorded earthquake, this PGA range can be used to identify an outer boundary within which we might expect to find landsliding; in earthquakes that are not well recorded, mapping the outermost landslide limits provides a useful clue about ground-motion levels at the mapped limits.

Stability of submarine slopes in the northern South China Sea: a numerical approach

NASA Astrophysics Data System (ADS)

Zhang, Liang; Luan, Xiwu

2013-01-01

Submarine landslides occur frequently on most continental margins. They are effective mechanisms of sediment transfer but also a geological hazard to seafloor installations. In this paper, submarine slope stability is evaluated using a 2D limit equilibrium method. Considerations of slope, sediment, and triggering force on the factor of safety (FOS) were calculated in drained and undrained ( Φ=0) cases. Results show that submarine slopes are stable when the slope is <16° under static conditions and without a weak interlayer. With a weak interlayer, slopes are stable at <18° in the drained case and at <9° in the undrained case. Earthquake loading can drastically reduce the shear strength of sediment with increased pore water pressure. The slope became unstable at >13° with earthquake peak ground acceleration (PGA) of 0.5 g; whereas with a weak layer, a PGA of 0.2 g could trigger instability at slopes >10°, and >3° for PGA of 0.5 g. The northern slope of the South China Sea is geomorphologically stable under static conditions. However, because of the possibility of high PGA at the eastern margin of the South China Sea, submarine slides are likely on the Taiwan Bank slope and eastern part of the Dongsha slope. Therefore, submarine slides recognized in seismic profiles on the Taiwan Bank slope would be triggered by an earthquake, the most important factor for triggering submarine slides on the northern slope of the South China Sea. Considering the distribution of PGA, we consider the northern slope of the South China Sea to be stable, excluding the Taiwan Bank slope, which is tectonically active.

Probabilistic seismic hazard analysis (PSHA) for Ethiopia and the neighboring region

NASA Astrophysics Data System (ADS)

Ayele, Atalay

2017-10-01

Seismic hazard calculation is carried out for the Horn of Africa region (0°-20° N and 30°-50°E) based on the probabilistic seismic hazard analysis (PSHA) method. The earthquakes catalogue data obtained from different sources were compiled, homogenized to Mw magnitude scale and declustered to remove the dependent events as required by Poisson earthquake source model. The seismotectonic map of the study area that avails from recent studies is used for area sources zonation. For assessing the seismic hazard, the study area was divided into small grids of size 0.5° × 0.5°, and the hazard parameters were calculated at the center of each of these grid cells by considering contributions from all seismic sources. Peak Ground Acceleration (PGA) corresponding to 10% and 2% probability of exceedance in 50 years were calculated for all the grid points using generic rock site with Vs = 760 m/s. Obtained values vary from 0.0 to 0.18 g and 0.0-0.35 g for 475 and 2475 return periods, respectively. The corresponding contour maps showing the spatial variation of PGA values for the two return periods are presented here. Uniform hazard response spectrum (UHRS) for 10% and 2% probability of exceedance in 50 years and hazard curves for PGA and 0.2 s spectral acceleration (Sa) all at rock site are developed for the city of Addis Ababa. The hazard map of this study corresponding to the 475 return periods has already been used to update and produce the 3rd generation building code of Ethiopia.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Akasaka, Hiroaki; Sasaki, Ryohei, E-mail: rsasaki@med.kobe-u.ac.jp; Miyawaki, Daisuke

Purpose: To evaluate the efficacy and safety of a polyglycolic acid (PGA) spacer through physical and animal experiments. Methods and Materials: The spacer was produced with surgical suture material made of PGA, forming a 3-dimensional nonwoven fabric. For evaluation or physical experiments, 150-MeV proton or 320-MeV carbon-ion beams were used to generate 60-mm width of spread-out Bragg peak. For animal experiments, the abdomens of C57BL/6 mice, with or without the inserted PGA spacers, were irradiated with 20 Gy of carbon-ion beam (290 MeV) using the spread-out Bragg peak. Body weight changes over time were scored, and radiation damage to the intestine wasmore » investigated using hematoxylin and eosin stain. Blood samples were also evaluated 24 days after the irradiation. Long-term thickness retention and safety were evaluated using crab-eating macaques. Results: No chemical or structural changes after 100 Gy of proton or carbon-ion irradiation were observed in the PGA spacer. Water equivalency of the PGA spacer was equal to the water thickness under wet condition. During 24 days' observation after 20 Gy of carbon-ion irradiation, the body weights of mice with the PGA spacer were relatively unchanged, whereas significant weight loss was observed in those mice without the PGA spacer (P<.05). In mice with the PGA spacer, villus and crypt structure were preserved after irradiation. No inflammatory reactions or liver or renal dysfunctions due to placement of the PGA spacer were observed. In the abdomen of crab-eating macaques, thickness of the PGA spacer was maintained 8 weeks after placement. Conclusions: The absorbable PGA spacer had water-equivalent, bio-compatible, and thickness-retaining properties. Although further evaluation is warranted in a clinical setting, the PGA spacer may be effective to stop proton or carbon-ion beams and to separate normal tissues from the radiation field.« less

Magnitude Estimation for Large Earthquakes from Borehole Recordings

NASA Astrophysics Data System (ADS)

Eshaghi, A.; Tiampo, K. F.; Ghofrani, H.; Atkinson, G.

2012-12-01

We present a simple and fast method for magnitude determination technique for earthquake and tsunami early warning systems based on strong ground motion prediction equations (GMPEs) in Japan. This method incorporates borehole strong motion records provided by the Kiban Kyoshin network (KiK-net) stations. We analyzed strong ground motion data from large magnitude earthquakes (5.0 ≤ M ≤ 8.1) with focal depths < 50 km and epicentral distances of up to 400 km from 1996 to 2010. Using both peak ground acceleration (PGA) and peak ground velocity (PGV) we derived GMPEs in Japan. These GMPEs are used as the basis for regional magnitude determination. Predicted magnitudes from PGA values (Mpga) and predicted magnitudes from PGV values (Mpgv) were defined. Mpga and Mpgv strongly correlate with the moment magnitude of the event, provided sufficient records for each event are available. The results show that Mpgv has a smaller standard deviation in comparison to Mpga when compared with the estimated magnitudes and provides a more accurate early assessment of earthquake magnitude. We test this new method to estimate the magnitude of the 2011 Tohoku earthquake and we present the results of this estimation. PGA and PGV from borehole recordings allow us to estimate the magnitude of this event 156 s and 105 s after the earthquake onset, respectively. We demonstrate that the incorporation of borehole strong ground-motion records immediately available after the occurrence of large earthquakes significantly increases the accuracy of earthquake magnitude estimation and the associated improvement in earthquake and tsunami early warning systems performance. Moment magnitude versus predicted magnitude (Mpga and Mpgv).

Strong motion simulation by the composite source modeling: A case study of 1679 M8.0 Sanhe-Pinggu earthquake

NASA Astrophysics Data System (ADS)

Liu, Bo-Yan; Shi, Bao-Ping; Zhang, Jian

2007-05-01

In this study, a composite source model has been used to calculate the realistic strong ground motions in Beijing area, caused by 1679 M S8.0 earthquake in Sanhe-Pinggu. The results could provide us the useful physical parameters for the future seismic hazard analysis in this area. Considering the regional geological/geophysical background, we simulated the scenario earthquake with an associated ground motions in the area ranging from 39.3°N to 41.1°N in latitude and from 115.35°E to 117.55°E in longitude. Some of the key factors which could influence the characteristics of strong ground motion have been discussed, and the resultant peak ground acceleration (PGA) distribution and the peak ground velocity (PGV) distribution around Beijing area also have been made as well. A comparison of the simulated result with the results derived from the attenuation relation has been made, and a sufficient discussion about the advantages and disadvantages of composite source model also has been given in this study. The numerical results, such as the PGA, PGV, peak ground displacement (PGD), and the three-component time-histories developed for Beijing area, have a potential application in earthquake engineering field and building code design, especially for the evaluation of critical constructions, government decision making and the seismic hazard assessment by financial/insurance companies.

On the Prediction of Ground Motion

NASA Astrophysics Data System (ADS)

Lavallee, D.; Schmedes, J.; Archuleta, R. J.

2012-12-01

Using a slip-weakening dynamic model of rupture, we generated earthquake scenarios that provided the spatio-temporal evolution of the slip on the fault and the radiated field at the free surface. We observed scenarios where the rupture propagates at a supershear speed on some parts of the fault while remaining subshear for other parts of the fault. For some scenarios with nearly identical initial conditions, the rupture speed was always subshear. For both types of scenarios (mixture of supershear and subshear speeds and only subshear), we compute the peak ground accelerations (PGA) regularly distributed over the Earth's surface. We then calculate the probability density functions (PDF) of the PGA. For both types of scenarios, the PDF curves are asymmetrically shaped and asymptotically attenuated according to power law. This behavior of the PDF is similar to that observed for the PDF curves of PGA recorded during earthquakes. The main difference between scenarios with a supershear rupture speed and scenarios with only subshear rupture speed is the range of PGA values. Based on these results, we investigate three issues fundamental for the prediction of ground motion. It is important to recognize that recorded ground motions during an earthquake sample a small fraction of the radiation field. It is not obvious that such sampling will capture the largest ground motion generated during an earthquake, nor that the number of stations is large enough to properly infer the statistical properties associated with the radiation field. To quantify the effect of under (or low) sampling of the radiation field, we design three experiments. For a scenario where the rupture speed is only subshear, we construct multiple sets of observations. Each set is comprised of 100 randomly selected PGA values from all of the PGA's calculated at the Earth's surface. In the first experiment, we evaluate how the distributions of PGA in the sets compare with the distribution of all the PGA. For this experiment, we used different statistical tests (e.g. chi-square). This experiment quantifies the likelihood that a random set of PGA can be used to infer the statistical properties of all the PGA. In the second experiment, we fit the PDF of the PGA of every set with probability laws used in the literature to describe the PDF of recorded PGA: the lognormal law, the generalized maximum extreme value law, and the Levy law. For each set, the probability laws are then used to compute the probability to observe a PGA value that will cause "moderate to heavy" potential damage according to Instrumental Intensity scale developed by USGS. For each probability law, we compare predictions based on the set with the prediction estimated from all the PGA. This experiment quantifies the reliability and uncertainty in predicting an outcome due to under sampling the radiation field. The third experiment consists in using the sets discussed above and repeats the two investigations discussed above but this time comparing with a scenario where the rupture has a supershear speed over part of the fault. The objective here is to assess additional uncertainty in predicting PGA and damage resulting from ruptures that have supershear speeds.

Distributions of strong ground motion due to dynamic ruptures across a bimaterial fault: Implications for seismic hazard analyses

NASA Astrophysics Data System (ADS)

Yuan, Jie; Zhu, Shoubiao

2016-12-01

We perform 2-D finite element calculations of mode II rupture along a bimaterial interface governed by regularized rate- and state-dependent friction law, with the goal of understanding how the bimaterial interface influences the strong ground motion. By comparison with properties of rupture in a homogeneous solid, we found that bimaterial mechanism is important for earthquake ruptures and influences the strong ground motion significantly. The simulated results show that mode II rupture evolves with propagation distance along a bimaterial interface to a unilateral wrinkle-like pulse in the direction of slip on the compliant side of the fault, namely in the positive direction. Strong ground motion caused by seismic waves emanated from the rupture propagation is asymmetrically distributed in space. The computed peak ground acceleration (PGA) is high in the near-fault region. Particularly, PGA is much larger in the region on the side in the positive direction. In addition, it is greater in the more compliant area of the model than that in the stiffer area with corresponding locations. Moreover, the differential PGA due to bimaterial effect increases with increasing degree of material contrast across the fault. It is hoped that the results obtained in this investigation will provide some implications for seismic hazard assessment and fault rupture mechanics.

Geometric effects resulting from the asymmetry of dipping fault: Hanging wall/ footwall effects

NASA Astrophysics Data System (ADS)

Wang, Dong; Xie, Li-Li; Hu, Jin-Jun

2008-05-01

Root-mean-square distance D rms with characteristic of weighted-average is introduced in this article firstly. D rms can be used to capture the general proximity of a site to a dipping fault plane comparing with the rupture distance D rup and the seismogenic distance D seis. Then, using D rup, D seis and D rms, the hanging wall/footwall effects on the peak ground acceleration (PGA) during the 1999 Chi-Chi earthquake are evaluated by regression analysis. The logarithm residual shows that the PGA on hanging wall is much greater than that on footwall at the same D rup or D seis when the D rup or D seis is used as site-to-source distance measure. In contrast, there is no significant difference between the PGA on hanging wall and that on footwall at the same D rms when D rms is used. This result confirms that the hanging wall/footwall effect is mainly a geometric effect caused by the asymmetry of dipping fault. Therefore, the hanging wall/footwall effect on the near-fault ground motions can be ignored in the future attenuation analysis if the root-mean-square distance D rms is used as the site-to-source distance measure.

Ground Motion Prediction Models for Caucasus Region

NASA Astrophysics Data System (ADS)

Jorjiashvili, Nato; Godoladze, Tea; Tvaradze, Nino; Tumanova, Nino

2016-04-01

Ground motion prediction models (GMPMs) relate ground motion intensity measures to variables describing earthquake source, path, and site effects. Estimation of expected ground motion is a fundamental earthquake hazard assessment. The most commonly used parameter for attenuation relation is peak ground acceleration or spectral acceleration because this parameter gives useful information for Seismic Hazard Assessment. Since 2003 development of Georgian Digital Seismic Network has started. In this study new GMP models are obtained based on new data from Georgian seismic network and also from neighboring countries. Estimation of models is obtained by classical, statistical way, regression analysis. In this study site ground conditions are additionally considered because the same earthquake recorded at the same distance may cause different damage according to ground conditions. Empirical ground-motion prediction models (GMPMs) require adjustment to make them appropriate for site-specific scenarios. However, the process of making such adjustments remains a challenge. This work presents a holistic framework for the development of a peak ground acceleration (PGA) or spectral acceleration (SA) GMPE that is easily adjustable to different seismological conditions and does not suffer from the practical problems associated with adjustments in the response spectral domain.

Probabilistic seismic hazard at the archaeological site of Gol Gumbaz in Vijayapura, south India

NASA Astrophysics Data System (ADS)

Patil, Shivakumar G.; Menon, Arun; Dodagoudar, G. R.

2018-03-01

Probabilistic seismic hazard analysis (PSHA) is carried out for the archaeological site of Vijayapura in south India in order to obtain hazard consistent seismic input ground-motions for seismic risk assessment and design of seismic protection measures for monuments, where warranted. For this purpose the standard Cornell-McGuire approach, based on seismogenic zones with uniformly distributed seismicity is employed. The main features of this study are the usage of an updated and unified seismic catalogue based on moment magnitude, new seismogenic source models and recent ground motion prediction equations (GMPEs) in logic tree framework. Seismic hazard at the site is evaluated for level and rock site condition with 10% and 2% probabilities of exceedance in 50 years, and the corresponding peak ground accelerations (PGAs) are 0.074 and 0.142 g, respectively. In addition, the uniform hazard spectra (UHS) of the site are compared to the Indian code-defined spectrum. Comparisons are also made with results from National Disaster Management Authority (NDMA 2010), in terms of PGA and pseudo spectral accelerations (PSAs) at T = 0.2, 0.5, 1.0 and 1.25 s for 475- and 2475-yr return periods. Results of the present study are in good agreement with the PGA calculated from isoseismal map of the Killari earthquake, {M}w = 6.4 (1993). Disaggregation of PSHA results for the PGA and spectral acceleration ({S}a) at 0.5 s, displays the controlling scenario earthquake for the study region as low to moderate magnitude with the source being at a short distance from the study site. Deterministic seismic hazard (DSHA) is also carried out by taking into account three scenario earthquakes. The UHS corresponding to 475-yr return period (RP) is used to define the target spectrum and accordingly, the spectrum-compatible natural accelerograms are selected from the suite of recorded accelerograms.

Maps Showing Seismic Landslide Hazards in Anchorage, Alaska

USGS Publications Warehouse

Jibson, Randall W.; Michael, John A.

2009-01-01

The devastating landslides that accompanied the great 1964 Alaska earthquake showed that seismically triggered landslides are one of the greatest geologic hazards in Anchorage. Maps quantifying seismic landslide hazards are therefore important for planning, zoning, and emergency-response preparation. The accompanying maps portray seismic landslide hazards for the following conditions: (1) deep, translational landslides, which occur only during great subduction-zone earthquakes that have return periods of =~300-900 yr; (2) shallow landslides for a peak ground acceleration (PGA) of 0.69 g, which has a return period of 2,475 yr, or a 2 percent probability of exceedance in 50 yr; and (3) shallow landslides for a PGA of 0.43 g, which has a return period of 475 yr, or a 10 percent probability of exceedance in 50 yr. Deep, translational landslide hazard zones were delineated based on previous studies of such landslides, with some modifications based on field observations of locations of deep landslides. Shallow-landslide hazards were delineated using a Newmark-type displacement analysis for the two probabilistic ground motions modeled.

Maps showing seismic landslide hazards in Anchorage, Alaska

USGS Publications Warehouse

Jibson, Randall W.

2014-01-01

The devastating landslides that accompanied the great 1964 Alaska earthquake showed that seismically triggered landslides are one of the greatest geologic hazards in Anchorage. Maps quantifying seismic landslide hazards are therefore important for planning, zoning, and emergency-response preparation. The accompanying maps portray seismic landslide hazards for the following conditions: (1) deep, translational landslides, which occur only during great subduction-zone earthquakes that have return periods of =300-900 yr; (2) shallow landslides for a peak ground acceleration (PGA) of 0.69 g, which has a return period of 2,475 yr, or a 2 percent probability of exceedance in 50 yr; and (3) shallow landslides for a PGA of 0.43 g, which has a return period of 475 yr, or a 10 percent probability of exceedance in 50 yr. Deep, translational landslide hazards were delineated based on previous studies of such landslides, with some modifications based on field observations of locations of deep landslides. Shallow-landslide hazards were delineated using a Newmark-type displacement analysis for the two probabilistic ground motions modeled.

Cost optimization of reinforced concrete cantilever retaining walls under seismic loading using a biogeography-based optimization algorithm with Levy flights

NASA Astrophysics Data System (ADS)

Aydogdu, Ibrahim

2017-03-01

In this article, a new version of a biogeography-based optimization algorithm with Levy flight distribution (LFBBO) is introduced and used for the optimum design of reinforced concrete cantilever retaining walls under seismic loading. The cost of the wall is taken as an objective function, which is minimized under the constraints implemented by the American Concrete Institute (ACI 318-05) design code and geometric limitations. The influence of peak ground acceleration (PGA) on optimal cost is also investigated. The solution of the problem is attained by the LFBBO algorithm, which is developed by adding Levy flight distribution to the mutation part of the biogeography-based optimization (BBO) algorithm. Five design examples, of which two are used in literature studies, are optimized in the study. The results are compared to test the performance of the LFBBO and BBO algorithms, to determine the influence of the seismic load and PGA on the optimal cost of the wall.

Monte Carlo simulation for slip rate sensitivity analysis in Cimandiri fault area

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pratama, Cecep, E-mail: great.pratama@gmail.com; Meilano, Irwan; Nugraha, Andri Dian

Slip rate is used to estimate earthquake recurrence relationship which is the most influence for hazard level. We examine slip rate contribution of Peak Ground Acceleration (PGA), in probabilistic seismic hazard maps (10% probability of exceedance in 50 years or 500 years return period). Hazard curve of PGA have been investigated for Sukabumi using a PSHA (Probabilistic Seismic Hazard Analysis). We observe that the most influence in the hazard estimate is crustal fault. Monte Carlo approach has been developed to assess the sensitivity. Then, Monte Carlo simulations properties have been assessed. Uncertainty and coefficient of variation from slip rate formore » Cimandiri Fault area has been calculated. We observe that seismic hazard estimates is sensitive to fault slip rate with seismic hazard uncertainty result about 0.25 g. For specific site, we found seismic hazard estimate for Sukabumi is between 0.4904 – 0.8465 g with uncertainty between 0.0847 – 0.2389 g and COV between 17.7% – 29.8%.« less

A seismic hazard uncertainty analysis for the New Madrid seismic zone

USGS Publications Warehouse

Cramer, C.H.

2001-01-01

A review of the scientific issues relevant to characterizing earthquake sources in the New Madrid seismic zone has led to the development of a logic tree of possible alternative parameters. A variability analysis, using Monte Carlo sampling of this consensus logic tree, is presented and discussed. The analysis shows that for 2%-exceedence-in-50-year hazard, the best-estimate seismic hazard map is similar to previously published seismic hazard maps for the area. For peak ground acceleration (PGA) and spectral acceleration at 0.2 and 1.0 s (0.2 and 1.0 s Sa), the coefficient of variation (COV) representing the knowledge-based uncertainty in seismic hazard can exceed 0.6 over the New Madrid seismic zone and diminishes to about 0.1 away from areas of seismic activity. Sensitivity analyses show that the largest contributor to PGA, 0.2 and 1.0 s Sa seismic hazard variability is the uncertainty in the location of future 1811-1812 New Madrid sized earthquakes. This is followed by the variability due to the choice of ground motion attenuation relation, the magnitude for the 1811-1812 New Madrid earthquakes, and the recurrence interval for M>6.5 events. Seismic hazard is not very sensitive to the variability in seismogenic width and length. Published by Elsevier Science B.V.

Summary of the GK15 ground‐motion prediction equation for horizontal PGA and 5% damped PSA from shallow crustal continental earthquakes

USGS Publications Warehouse

Graizer, Vladimir;; Kalkan, Erol

2016-01-01

We present a revised ground‐motion prediction equation (GMPE) for computing medians and standard deviations of peak ground acceleration (PGA) and 5% damped pseudospectral acceleration (PSA) response ordinates of the horizontal component of randomly oriented ground motions to be used for seismic‐hazard analyses and engineering applications. This GMPE is derived from the expanded Next Generation Attenuation (NGA)‐West 1 database (see Data and Resources; Chiou et al., 2008). The revised model includes an anelastic attenuation term as a function of quality factor (Q0) to capture regional differences in far‐source (beyond 150 km) attenuation, and a new frequency‐dependent sedimentary‐basin scaling term as a function of depth to the 1.5  km/s shear‐wave velocity isosurface to improve ground‐motion predictions at sites located on deep sedimentary basins. The new Graizer–Kalkan 2015 (GK15) model, developed to be simple, is applicable for the western United States and other similar shallow crustal continental regions in active tectonic environments for earthquakes with moment magnitudes (M) 5.0–8.0, distances 0–250 km, average shear‐wave velocities in the upper 30 m (VS30) 200–1300  m/s, and spectral periods (T) 0.01–5 s. Our aleatory variability model captures interevent (between‐event) variability, which decreases with magnitude and increases with distance. The mixed‐effect residuals analysis reveals that the GK15 has no trend with respect to the independent predictor parameters. Compared to our 2007–2009 GMPE, the PGA values are very similar, whereas spectral ordinates predicted are larger at T<0.2  s and they are smaller at longer periods.

Five parameters for the evaluation of the soil nonlinearity during the Ms8.0 Wenchuan Earthquake using the HVSR method

NASA Astrophysics Data System (ADS)

Ren, Yefei; Wen, Ruizhi; Yao, Xinxin; Ji, Kun

2017-08-01

The consideration of soil nonlinearity is important for the accurate estimation of the site response. To evaluate the soil nonlinearity during the 2008 Ms8.0 Wenchuan Earthquake, 33 strong-motion records obtained from the main shock and 890 records from 157 aftershocks were collected for this study. The horizontal-to-vertical spectral ratio (HVSR) method was used to calculate five parameters: the ratio of predominant frequency (RFp), degree of nonlinearity (DNL), absolute degree of nonlinearity (ADNL), frequency of nonlinearity (fNL), and percentage of nonlinearity (PNL). The purpose of this study was to evaluate the soil nonlinearity level of 33 strong-motion stations and to investigate the characteristics, performance, and effective usage of these five parameters. Their correlations with the peak ground acceleration (PGA), peak ground velocity (PGV), average uppermost 30-m shear-wave velocity ( V S30), and maximum amplitude of HVSR ( A max) were investigated. The results showed that all five parameters correlate well with PGA and PGV. The DNL, ADNL, and PNL also show a good correlation with A max, which means that the degree of soil nonlinearity not only depends on the ground-motion amplitude (e.g., PGA and PGV) but also on the site condition. The fNL correlates with PGA and PGV but shows no correlation with either A max or V S30, implying that the frequency width affected by the soil nonlinearity predominantly depends on the ground-motion amplitude rather than the site condition. At 16 of the 33 stations analyzed in this study, the site response showed evident (i.e., strong and medium) nonlinearity during the main shock of the Wenchuan Earthquake, where the ground-motion level was almost beyond the threshold of PGA > 200 cm/s2 or PGV > 15 cm/s. The site response showed weak and no nonlinearity at the other 14 and 3 stations. These results also confirm that RFp, DNL, ADNL, and PNL are effective in identifying the soil nonlinearity behavior. The identification results vary for different parameters because each parameter has individual features. The performance of the PNL was better than that of DNL and ADNL in this case study. The thresholds of ADNL and PNL are proposed to be 2.0 and 7%, respectively.[Figure not available: see fulltext.

TEM PSHA2015 Reliability Assessment

NASA Astrophysics Data System (ADS)

Lee, Y.; Wang, Y. J.; Chan, C. H.; Ma, K. F.

2016-12-01

The Taiwan Earthquake Model (TEM) developed a new probabilistic seismic hazard analysis (PSHA) for determining the probability of exceedance (PoE) of ground motion over a specified period in Taiwan. To investigate the adequacy of the seismic source parameters adopted in the 2015 PSHA of the TEM (TEM PSHA2015), we conducted several tests of the seismic source models. The observed maximal peak ground acceleration (PGA) of the ML > 4.0 mainshocks in the 23-year data period of 1993-2015 were used to test the predicted PGA of PSHA from the areal and subduction zone sources with the time-independent Poisson assumption. This comparison excluded the observations from 1999 Chi-Chi earthquake, as this was the only earthquake associated with the identified active fault in this past 23 years. We used tornado diagrams to analyze the sensitivities of these source parameters to the ground motion values of the PSHA. This study showed that the predicted PGA for a 63% PoE in the 23-year period corresponded to the empirical PGA and the predicted numbers of PGA exceedances to a threshold value 0.1g close to the observed numbers, confirming the parameter applicability for the areal and subduction zone sources. We adopted the disaggregation analysis from a hazard map to determine the contribution of the individual seismic sources to hazard for six metropolitan cities in Taiwan. The sensitivity tests of the seismogenic structure parameters indicated that the slip rate and maximum magnitude are dominant factors for the TEM PSHA2015. For densely populated faults in SW Taiwan, maximum magnitude is more sensitive than the slip rate, giving the concern on the possible multiple fault segments rupture with larger magnitude in this area, which was not yet considered in TEM PSHA2015. The source category disaggregation also suggested that special attention is necessary for subduction zone earthquakes for long-period shaking seismic hazards in Northern Taiwan.

Rotational motions from the 2016, Central Italy seismic sequence, as observed by an underground ring laser gyroscope

NASA Astrophysics Data System (ADS)

Simonelli, A.; Igel, H.; Wassermann, J.; Belfi, J.; Di Virgilio, A.; Beverini, N.; De Luca, G.; Saccorotti, G.

2018-05-01

We present the analysis of rotational and translational ground motions from earthquakes recorded during October/November, 2016, in association with the Central Italy seismic-sequence. We use co-located measurements of the vertical ground rotation rate from a large ring laser gyroscope (RLG), and the three components of ground velocity from a broadband seismometer. Both instruments are positioned in a deep underground environment, within the Gran Sasso National Laboratories (LNGS) of the Istituto Nazionale di Fisica Nucleare (INFN). We collected dozens of events spanning the 3.5-5.9 Magnitude range, and epicentral distances between 30 km and 70 km. This data set constitutes an unprecedented observation of the vertical rotational motions associated with an intense seismic sequence at local distance. Under the plane wave approximation we process the data set in order to get an experimental estimation of the events back azimuth. Peak values of rotation rate (PRR) and horizontal acceleration (PGA) are markedly correlated, according to a scaling constant which is consistent with previous measurements from different earthquake sequences. We used a prediction model in use for Italy to calculate the expected PGA at the recording site, obtaining consequently predictions for PRR. Within the modeling uncertainties, predicted rotations are consistent with the observed ones, suggesting the possibility of establishing specific attenuation models for ground rotations, like the scaling of peak velocity and peak acceleration in empirical ground-motion prediction relationships. In a second step, after identifying the direction of the incoming wave-field, we extract phase velocity data using the spectral ratio of the translational and rotational components.. This analysis is performed over time windows associated with the P-coda, S-coda and Lg phase. Results are consistent with independent estimates of shear-wave velocities in the shallow crust of the Central Apennines.

Poly(γ-glutamic acid)-coated lipoplexes loaded with Doxorubicin for enhancing the antitumor activity against liver tumors

NASA Astrophysics Data System (ADS)

Qi, Na; Tang, Bo; Liu, Guang; Liang, Xingsi

2017-05-01

The study was to develop poly-γ-glutamic acid (γ-PGA)-coated Doxorubicin (Dox) lipoplexes that enhance the antitumor activity against liver tumors. γ-PGA-coated lipoplexes were performed by electrostatistically attracting to the surface of cationic charge liposomes with anionic γ-PGA. With the increasing of γ-PGA concentration, the particle size of γ-PGA-coated Dox lipoplexes slightly increased, the zeta potential from positive shifted to negative, and the entrapment efficiency (EE) were no significant change. The release rate of γ-PGA-coated Dox lipoplexes slightly increased at acidic pH, the accelerated Dox release might be attributed to greater drug delivery to tumor cells, resulting in a higher antitumor activity. Especially, γ-PGA-coated Dox lipoplexes exhibited higher cellular uptake, significant in vitro cytotoxicity in HepG2 cells, and improved in vivo antitumor efficacy toward HepG2 hepatoma-xenografted nude models in comparison with Dox liposomes and free Dox solution. In addition, the analysis results via flow cytometry showed that γ-PGA-coated Dox lipoplexes induce S phase cell cycle arrest and significantly increased apoptosis rate of HepG2 cells. In conclusion, the presence of γ-PGA on the surface of Dox lipoplexes enhanced antitumor effects of liver tumors.

Tunnel flexibility effect on the ground surface acceleration response

NASA Astrophysics Data System (ADS)

Baziar, Mohammad Hassan; Moghadam, Masoud Rabeti; Choo, Yun Wook; Kim, Dong-Soo

2016-09-01

Flexibility of underground structures relative to the surrounding medium, referred to as the flexibility ratio, is an important factor that influences their dynamic interaction. This study investigates the flexibility effect of a box-shaped subway tunnel, resting directly on bedrock, on the ground surface acceleration response using a numerical model verified against dynamic centrifuge test results. A comparison of the ground surface acceleration response for tunnel models with different flexibility ratios revealed that the tunnels with different flexibility ratios influence the acceleration response at the ground surface in different ways. Tunnels with lower flexibility ratios have higher acceleration responses at short periods, whereas tunnels with higher flexibility ratios have higher acceleration responses at longer periods. The effect of the flexibility ratio on ground surface acceleration is more prominent in the high range of frequencies. Furthermore, as the flexibility ratio of the tunnel system increases, the acceleration response moves away from the free field response and shifts towards the longer periods. Therefore, the flexibility ratio of the underground tunnels influences the peak ground acceleration (PGA) at the ground surface, and may need to be considered in the seismic zonation of urban areas.

Within-Event and Between-Events Ground Motion Variability from Earthquake Rupture Scenarios

NASA Astrophysics Data System (ADS)

Crempien, Jorge G. F.; Archuleta, Ralph J.

2017-09-01

Measurement of ground motion variability is essential to estimate seismic hazard. Over-estimation of variability can lead to extremely high annual hazard estimates of ground motion exceedance. We explore different parameters that affect the variability of ground motion such as the spatial correlations of kinematic rupture parameters on a finite fault and the corner frequency of the moment-rate spectra. To quantify the variability of ground motion, we simulate kinematic rupture scenarios on several vertical strike-slip faults and compute ground motion using the representation theorem. In particular, for the entire suite of rupture scenarios, we quantify the within-event and the between-events ground motion variability of peak ground acceleration (PGA) and response spectra at several periods, at 40 stations—all approximately at an equal distance of 20 and 50 km from the fault. Both within-event and between-events ground motion variability increase when the slip correlation length on the fault increases. The probability density functions of ground motion tend to truncate at a finite value when the correlation length of slip decreases on the fault, therefore, we do not observe any long-tail distribution of peak ground acceleration when performing several rupture simulations for small correlation lengths. Finally, for a correlation length of 6 km, the within-event and between-events PGA log-normal standard deviations are 0.58 and 0.19, respectively, values slightly smaller than those reported by Boore et al. (Earthq Spectra, 30(3):1057-1085, 2014). The between-events standard deviation is consistently smaller than the within-event for all correlations lengths, a feature that agrees with recent ground motion prediction equations.

Ground motion simulation for the 23 August 2011, Mineral, Virginia earthquake using physics-based and stochastic broadband methods

USGS Publications Warehouse

Sun, Xiaodan; Hartzell, Stephen; Rezaeian, Sanaz

2015-01-01

Three broadband simulation methods are used to generate synthetic ground motions for the 2011 Mineral, Virginia, earthquake and compare with observed motions. The methods include a physics‐based model by Hartzell et al. (1999, 2005), a stochastic source‐based model by Boore (2009), and a stochastic site‐based model by Rezaeian and Der Kiureghian (2010, 2012). The ground‐motion dataset consists of 40 stations within 600 km of the epicenter. Several metrics are used to validate the simulations: (1) overall bias of response spectra and Fourier spectra (from 0.1 to 10 Hz); (2) spatial distribution of residuals for GMRotI50 peak ground acceleration (PGA), peak ground velocity, and pseudospectral acceleration (PSA) at various periods; (3) comparison with ground‐motion prediction equations (GMPEs) for the eastern United States. Our results show that (1) the physics‐based model provides satisfactory overall bias from 0.1 to 10 Hz and produces more realistic synthetic waveforms; (2) the stochastic site‐based model also yields more realistic synthetic waveforms and performs superiorly for frequencies greater than about 1 Hz; (3) the stochastic source‐based model has larger bias at lower frequencies (<0.5  Hz) and cannot reproduce the varying frequency content in the time domain. The spatial distribution of GMRotI50 residuals shows that there is no obvious pattern with distance in the simulation bias, but there is some azimuthal variability. The comparison between synthetics and GMPEs shows similar fall‐off with distance for all three models, comparable PGA and PSA amplitudes for the physics‐based and stochastic site‐based models, and systematic lower amplitudes for the stochastic source‐based model at lower frequencies (<0.5  Hz).

Ground motions at the outermost limits of seismically triggered landslides

USGS Publications Warehouse

Jibson, Randall W.; Harp, Edwin L.

2016-01-01

Over the last few decades, we and our colleagues have conducted field investigations in which we mapped the outermost limits of triggered landslides in four earthquakes: 1987 Whittier Narrows, California (M 5.9), 1987 Superstition Hills, California (M 6.5), 1994 Northridge, California (M 6.7), and 2011 Mineral, Virginia (M 5.8). In an additional two earthquakes, 1976 Guatemala (M 7.5) and 1983 Coalinga, California (M 6.5), we determined limits using high‐resolution aerial‐photographic interpretation in conjunction with more limited ground investigation. Limits in these earthquakes were defined by the locations of the very smallest failures (<1  m3) from the most susceptible slopes that can be identified positively as having been triggered by earthquake shaking. Because we and our colleagues conducted all of these investigations, consistent methodology and criteria were used in determining limits. In the six earthquakes examined, we correlated the outermost landslide limits with peak ground accelerations (PGAs) from ShakeMap models of each earthquake. For the four earthquakes studied by field investigation, the minimum PGA values associated with farthest landslide limits ranged from 0.02g to 0.08g. The range for the two earthquakes investigated using aerial‐photographic interpretations was 0.05–0.11g. Although PGA values at landslide limits depend on several factors, including material strength, topographic amplification, and hydrologic conditions, these values provide an empirically useful lower limiting range of PGA needed to trigger the smallest failures on very susceptible slopes. In a well‐recorded earthquake, this PGA range can be used to identify an outer boundary within which we might expect to find landsliding; in earthquakes that are not well recorded, mapping the outermost landslide limits provides a useful clue about ground‐motion levels at the mapped limits.

Recent Improvements to the Finite-Fault Rupture Detector Algorithm: FinDer II

NASA Astrophysics Data System (ADS)

Smith, D.; Boese, M.; Heaton, T. H.

2015-12-01

Constraining the finite-fault rupture extent and azimuth is crucial for accurately estimating ground-motion in large earthquakes. Detecting and modeling finite-fault ruptures in real-time is thus essential to both earthquake early warning (EEW) and rapid emergency response. Following extensive real-time and offline testing, the finite-fault rupture detector algorithm, FinDer (Böse et al., 2012 & 2015), was successfully integrated into the California-wide ShakeAlert EEW demonstration system. Since April 2015, FinDer has been scanning real-time waveform data from approximately 420 strong-motion stations in California for peak ground acceleration (PGA) patterns indicative of earthquakes. FinDer analyzes strong-motion data by comparing spatial images of observed PGA with theoretical templates modeled from empirical ground-motion prediction equations (GMPEs). If the correlation between the observed and theoretical PGA is sufficiently high, a report is sent to ShakeAlert including the estimated centroid position, length, and strike, and their uncertainties, of an ongoing fault rupture. Rupture estimates are continuously updated as new data arrives. As part of a joint effort between USGS Menlo Park, ETH Zurich, and Caltech, we have rewritten FinDer in C++ to obtain a faster and more flexible implementation. One new feature of FinDer II is that multiple contour lines of high-frequency PGA are computed and correlated with templates, allowing the detection of both large earthquakes and much smaller (~ M3.5) events shortly after their nucleation. Unlike previous EEW algorithms, FinDer II thus provides a modeling approach for both small-magnitude point-source and larger-magnitude finite-fault ruptures with consistent error estimates for the entire event magnitude range.

Peak ground motion predictions with empirical site factors using Taiwan Strong Motion Network recordings

NASA Astrophysics Data System (ADS)

Chung, Jen-Kuang

2013-09-01

A stochastic method called the random vibration theory (Boore, 1983) has been used to estimate the peak ground motions caused by shallow moderate-to-large earthquakes in the Taiwan area. Adopting Brune's ω-square source spectrum, attenuation models for PGA and PGV were derived from path-dependent parameters which were empirically modeled from about one thousand accelerograms recorded at reference sites mostly located in a mountain area and which have been recognized as rock sites without soil amplification. Consequently, the predicted horizontal peak ground motions at the reference sites, are generally comparable to these observed. A total number of 11,915 accelerograms recorded from 735 free-field stations of the Taiwan Strong Motion Network (TSMN) were used to estimate the site factors by taking the motions from the predictive models as references. Results from soil sites reveal site amplification factors of approximately 2.0 ~ 3.5 for PGA and about 1.3 ~ 2.6 for PGV. Finally, as a result of amplitude corrections with those empirical site factors, about 75% of analyzed earthquakes are well constrained in ground motion predictions, having average misfits ranging from 0.30 to 0.50. In addition, two simple indices, R 0.57 and R 0.38, are proposed in this study to evaluate the validity of intensity map prediction for public information reports. The average percentages of qualified stations for peak acceleration residuals less than R 0.57 and R 0.38 can reach 75% and 54%, respectively, for most earthquakes. Such a performance would be good enough to produce a faithful intensity map for a moderate scenario event in the Taiwan region.

Velocity spectrum for the Iranian plateau

NASA Astrophysics Data System (ADS)

Bastami, Morteza; Soghrat, M. R.

2018-01-01

Peak ground acceleration (PGA) and spectral acceleration values have been proposed in most building codes/guidelines, unlike spectral velocity (SV) and peak ground velocity (PGV). Recent studies have demonstrated the importance of spectral velocity and peak ground velocity in the design of long period structures (e.g., pipelines, tunnels, tanks, and high-rise buildings) and evaluation of seismic vulnerability in underground structures. The current study was undertaken to develop a velocity spectrum and for estimation of PGV. In order to determine these parameters, 398 three-component accelerograms recorded by the Building and Housing Research Center (BHRC) were used. The moment magnitude (Mw) in the selected database was 4.1 to 7.3, and the events occurred after 1977. In the database, the average shear-wave velocity at 0 to 30 m in depth (Vs30) was available for only 217 records; thus, the site class for the remaining was estimated using empirical methods. Because of the importance of the velocity spectrum at low frequencies, the signal-to-noise ratio of 2 was chosen for determination of the low and high frequency to include a wider range of frequency content. This value can produce conservative results. After estimation of the shape of the velocity design spectrum, the PGV was also estimated for the region under study by finding the correlation between PGV and spectral acceleration at the period of 1 s.

Seismic fragility formulations for segmented buried pipeline systems including the impact of differential ground subsidence

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pineda Porras, Omar Andrey; Ordaz, Mario

2009-01-01

Though Differential Ground Subsidence (DGS) impacts the seismic response of segmented buried pipelines augmenting their vulnerability, fragility formulations to estimate repair rates under such condition are not available in the literature. Physical models to estimate pipeline seismic damage considering other cases of permanent ground subsidence (e.g. faulting, tectonic uplift, liquefaction, and landslides) have been extensively reported, not being the case of DGS. The refinement of the study of two important phenomena in Mexico City - the 1985 Michoacan earthquake scenario and the sinking of the city due to ground subsidence - has contributed to the analysis of the interrelation ofmore » pipeline damage, ground motion intensity, and DGS; from the analysis of the 48-inch pipeline network of the Mexico City's Water System, fragility formulations for segmented buried pipeline systems for two DGS levels are proposed. The novel parameter PGV{sup 2}/PGA, being PGV peak ground velocity and PGA peak ground acceleration, has been used as seismic parameter in these formulations, since it has shown better correlation to pipeline damage than PGV alone according to previous studies. By comparing the proposed fragilities, it is concluded that a change in the DGS level (from Low-Medium to High) could increase the pipeline repair rates (number of repairs per kilometer) by factors ranging from 1.3 to 2.0; being the higher the seismic intensity the lower the factor.« less

Rupture directivity of moderate earthquakes in northern California

USGS Publications Warehouse

Seekins, Linda C.; Boatwright, John

2010-01-01

We invert peak ground velocity and acceleration (PGV and PGA) to estimate rupture direction and rupture velocity for 47 moderate earthquakes (3.5≥M≥5.4) in northern California. We correct sets of PGAs and PGVs recorded at stations less than 55–125 km, depending on source depth, for site amplification and source–receiver distance, then fit the residual peak motions to the unilateral directivity function of Ben-Menahem (1961). We independently invert PGA and PGV. The rupture direction can be determined using as few as seven peak motions if the station distribution is sufficient. The rupture velocity is unstable, however, if there are no takeoff angles within 30° of the rupture direction. Rupture velocities are generally subsonic (0.5β–0.9β); for stability, we limit the rupture velocity at v=0.92β, the Rayleigh wave speed. For 73 of 94 inversions, the rupture direction clearly identifies one of the nodal planes as the fault plane. The 35 strike-slip earthquakes have rupture directions that range from nearly horizontal (6 events) to directly updip (5 events); the other 24 rupture partly along strike and partly updip. Two strike-slip earthquakes rupture updip in one inversion and downdip in the other. All but 1 of the 11 thrust earthquakes rupture predominantly updip. We compare the rupture directions for 10 M≥4.0 earthquakes to the relative location of the mainshock and the first two weeks of aftershocks. Spatial distributions of 8 of 10 aftershock sequences agree well with the rupture directivity calculated for the mainshock.

NGA-West2 equations for predicting vertical-component PGA, PGV, and 5%-damped PSA from shallow crustal earthquakes

USGS Publications Warehouse

Stewart, Jonathan P.; Boore, David M.; Seyhan, Emel; Atkinson, Gail M.

2016-01-01

We present ground motion prediction equations (GMPEs) for computing natural log means and standard deviations of vertical-component intensity measures (IMs) for shallow crustal earthquakes in active tectonic regions. The equations were derived from a global database with M 3.0–7.9 events. The functions are similar to those for our horizontal GMPEs. We derive equations for the primary M- and distance-dependence of peak acceleration, peak velocity, and 5%-damped pseudo-spectral accelerations at oscillator periods between 0.01–10 s. We observe pronounced M-dependent geometric spreading and region-dependent anelastic attenuation for high-frequency IMs. We do not observe significant region-dependence in site amplification. Aleatory uncertainty is found to decrease with increasing magnitude; within-event variability is independent of distance. Compared to our horizontal-component GMPEs, attenuation rates are broadly comparable (somewhat slower geometric spreading, faster apparent anelastic attenuation), VS30-scaling is reduced, nonlinear site response is much weaker, within-event variability is comparable, and between-event variability is greater.

Bacillus anthracis Capsular Conjugates Elicit Chimpanzee Polyclonal Antibodies That Protect Mice from Pulmonary Anthrax.

PubMed

Chen, Zhaochun; Schneerson, Rachel; Lovchik, Julie A; Dai, Zhongdong; Kubler-Kielb, Joanna; Agulto, Liane; Leppla, Stephen H; Purcell, Robert H

2015-08-01

The immunogenicity of Bacillus anthracis capsule (poly-γ-D-glutamic acid [PGA]) conjugated to recombinant B. anthracis protective antigen (rPA) or to tetanus toxoid (TT) was evaluated in two anthrax-naive juvenile chimpanzees. In a previous study of these conjugates, highly protective monoclonal antibodies (MAbs) against PGA were generated. This study examines the polyclonal antibody response of the same animals. Preimmune antibodies to PGA with titers of >10(3) were detected in the chimpanzees. The maximal titer of anti-PGA was induced within 1 to 2 weeks following the 1st immunization, with no booster effects following the 2nd and 3rd immunizations. Thus, the anti-PGA response in the chimpanzees resembled a secondary immune response. Screening of sera from nine unimmunized chimpanzees and six humans revealed antibodies to PGA in all samples, with an average titer of 10(3). An anti-PA response was also observed following immunization with PGA-rPA conjugate, similar to that seen following immunization with rPA alone. However, in contrast to anti-PGA, preimmune anti-PA antibody titers and those following the 1st immunization were ≤300, with the antibodies peaking above 10(4) following the 2nd immunization. The polyclonal anti-PGA shared the MAb 11D epitope and, similar to the MAbs, exerted opsonophagocytic killing of B. anthracis. Most important, the PGA-TT-induced antibodies protected mice from a lethal challenge with virulent B. anthracis spores. Our data support the use of PGA conjugates, especially PGA-rPA targeting both toxin and capsule, as expanded-spectrum anthrax vaccines. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

Scaled accelerographs for design of structures in Quetta, Baluchistan, Pakistan

NASA Astrophysics Data System (ADS)

Bhatti, Abdul Qadir

2016-12-01

Structural design for seismic excitation is usually based on peak values of forces and deformations over the duration of earthquake. In determining these peak values dynamic analysis is done which requires either response history analysis (RHA), also called time history analysis, or response spectrum analysis (RSA), both of which depend upon ground motion severity. In the past, PGA has been used to describe ground motion severity, because seismic force on a rigid body is proportional to the ground acceleration. However, it has been pointed out that single highest peak on accelerograms is a very unreliable description of the accelerograms as a whole. In this study, we are considering 0.2- and 1-s spectral acceleration. Seismic loading has been defined in terms of design spectrum and time history which will lead us to two methods of dynamic analysis. Design spectrum for Quetta will be constructed incorporating the parameters of ASCE 7-05/IBC 2006/2009, which is being used by modern codes and regulation of the world like IBC 2006/2009, ASCE 7-05, ATC-40, FEMA-356 and others. A suite of time history representing design earthquake will also be prepared, this will be a helpful tool to carryout time history dynamic analysis of structures in Quetta.

Sensitivity analysis of seismic hazard for the northwestern portion of the state of Gujarat, India

USGS Publications Warehouse

Petersen, M.D.; Rastogi, B.K.; Schweig, E.S.; Harmsen, S.C.; Gomberg, J.S.

2004-01-01

We test the sensitivity of seismic hazard to three fault source models for the northwestern portion of Gujarat, India. The models incorporate different characteristic earthquake magnitudes on three faults with individual recurrence intervals of either 800 or 1600 years. These recurrence intervals imply that large earthquakes occur on one of these faults every 266-533 years, similar to the rate of historic large earthquakes in this region during the past two centuries and for earthquakes in intraplate environments like the New Madrid region in the central United States. If one assumes a recurrence interval of 800 years for large earthquakes on each of three local faults, the peak ground accelerations (PGA; horizontal) and 1-Hz spectral acceleration ground motions (5% damping) are greater than 1 g over a broad region for a 2% probability of exceedance in 50 years' hazard level. These probabilistic PGAs at this hazard level are similar to median deterministic ground motions. The PGAs for 10% in 50 years' hazard level are considerably lower, generally ranging between 0.2 g and 0.7 g across northwestern Gujarat. Ground motions calculated from our models that consider fault interevent times of 800 years are considerably higher than other published models even though they imply similar recurrence intervals. These higher ground motions are mainly caused by the application of intraplate attenuation relations, which account for less severe attenuation of seismic waves when compared to the crustal interplate relations used in these previous studies. For sites in Bhuj and Ahmedabad, magnitude (M) 7 3/4 earthquakes contribute most to the PGA and the 0.2- and 1-s spectral acceleration ground motion maps at the two considered hazard levels. ?? 2004 Elsevier B.V. All rights reserved.

Probabilistic Seismic Hazard Assessment for Himalayan-Tibetan Region from Historical and Instrumental Earthquake Catalogs

NASA Astrophysics Data System (ADS)

Rahman, M. Moklesur; Bai, Ling; Khan, Nangyal Ghani; Li, Guohui

2018-02-01

The Himalayan-Tibetan region has a long history of devastating earthquakes with wide-spread casualties and socio-economic damages. Here, we conduct the probabilistic seismic hazard analysis by incorporating the incomplete historical earthquake records along with the instrumental earthquake catalogs for the Himalayan-Tibetan region. Historical earthquake records back to more than 1000 years ago and an updated, homogenized and declustered instrumental earthquake catalog since 1906 are utilized. The essential seismicity parameters, namely, the mean seismicity rate γ, the Gutenberg-Richter b value, and the maximum expected magnitude M max are estimated using the maximum likelihood algorithm assuming the incompleteness of the catalog. To compute the hazard value, three seismogenic source models (smoothed gridded, linear, and areal sources) and two sets of ground motion prediction equations are combined by means of a logic tree on accounting the epistemic uncertainties. The peak ground acceleration (PGA) and spectral acceleration (SA) at 0.2 and 1.0 s are predicted for 2 and 10% probabilities of exceedance over 50 years assuming bedrock condition. The resulting PGA and SA maps show a significant spatio-temporal variation in the hazard values. In general, hazard value is found to be much higher than the previous studies for regions, where great earthquakes have actually occurred. The use of the historical and instrumental earthquake catalogs in combination of multiple seismogenic source models provides better seismic hazard constraints for the Himalayan-Tibetan region.

Quantifying Dynamic Changes in Plantar Pressure Gradient in Diabetics with Peripheral Neuropathy.

PubMed

Lung, Chi-Wen; Hsiao-Wecksler, Elizabeth T; Burns, Stephanie; Lin, Fang; Jan, Yih-Kuen

2016-01-01

Diabetic foot ulcers remain one of the most serious complications of diabetes. Peak plantar pressure (PPP) and peak pressure gradient (PPG) during walking have been shown to be associated with the development of diabetic foot ulcers. To gain further insight into the mechanical etiology of diabetic foot ulcers, examination of the pressure gradient angle (PGA) has been recently proposed. The PGA quantifies directional variation or orientation of the pressure gradient during walking and provides a measure of whether pressure gradient patterns are concentrated or dispersed along the plantar surface. We hypothesized that diabetics at risk of foot ulceration would have smaller PGA in key plantar regions, suggesting less movement of the pressure gradient over time. A total of 27 participants were studied, including 19 diabetics with peripheral neuropathy and 8 non-diabetic control subjects. A foot pressure measurement system was used to measure plantar pressures during walking. PPP, PPG, and PGA were calculated for four foot regions - first toe (T1), first metatarsal head (M1), second metatarsal head (M2), and heel (HL). Consistent with prior studies, PPP and PPG were significantly larger in the diabetic group compared with non-diabetic controls in the T1 and M1 regions, but not M2 or HL. For example, PPP was 165% (P = 0.02) and PPG was 214% (P < 0.001) larger in T1. PGA was found to be significantly smaller in the diabetic group in T1 (46%, P = 0.04), suggesting a more concentrated pressure gradient pattern under the toe. The proposed PGA may improve our understanding of the role of pressure gradient on the risk of diabetic foot ulcers.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rutqvist, Jonny; Cappa, Frédéric; Rinaldi, Antonio P.

In this paper, we present model simulations of ground motions caused by CO 2 -injection-induced fault reactivation and analyze the results in terms of the potential for damage to ground surface structures and nuisance to the local human population. It is an integrated analysis from cause to consequence, including the whole chain of processes starting from earthquake inception in the subsurface, wave propagation toward the ground surface, and assessment of the consequences of ground vibration. For a small magnitude (M w =3) event at a hypocenter depth of about 1000m, we first used the simulated ground-motion wave train in anmore » inverse analysis to estimate source parameters (moment magnitude, rupture dimensions and stress drop), achieving good agreement and thereby verifying the modeling of the chain of processes from earthquake inception to ground vibration. We then analyzed the ground vibration results in terms of peak ground acceleration (PGA), peak ground velocity (PGV) and frequency content, with comparison to U.S. Geological Survey's instrumental intensity scales for earthquakes and the U.S. Bureau of Mines' vibration criteria for cosmetic damage to buildings, as well as human-perception vibration limits. Our results confirm the appropriateness of using PGV (rather than PGA) and frequency for the evaluation of potential ground-vibration effects on structures and humans from shallow injection-induced seismic events. For the considered synthetic M w =3 event, our analysis showed that the short duration, high frequency ground motion may not cause any significant damage to surface structures, but would certainly be felt by the local population.« less

Simulation of strong ground motion parameters of the 1 June 2013 Gulf of Suez earthquake, Egypt

NASA Astrophysics Data System (ADS)

Toni, Mostafa

2017-06-01

This article aims to simulate the ground motion parameters of the moderate magnitude (ML 5.1) June 1, 2013 Gulf of Suez earthquake, which represents the largest instrumental earthquake to be recorded in the middle part of the Gulf of Suez up to now. This event was felt in all cities located on both sides of the Gulf of Suez, with minor damage to property near the epicenter; however, no casualties were observed. The stochastic technique with the site-dependent spectral model is used to simulate the strong ground motion parameters of this earthquake in the cities located at the western side of the Gulf of Suez and north Red Sea namely: Suez, Ain Sokhna, Zafarana, Ras Gharib, and Hurghada. The presence of many tourist resorts and the increase in land use planning in the considered cities represent the motivation of the current study. The simulated parameters comprise the Peak Ground Acceleration (PGA), Peak Ground Velocity (PGV), and Peak Ground Displacement (PGD), in addition to Pseudo Spectral Acceleration (PSA). The model developed for ground motion simulation is validated by using the recordings of three accelerographs installed around the epicenter of the investigated earthquake. Depending on the site effect that has been determined in the investigated areas by using geotechnical data (e.g., shear wave velocities and microtremor recordings), the investigated areas are classified into two zones (A and B). Zone A is characterized by higher site amplification than Zone B. The ground motion parameters are simulated at each zone in the considered areas. The results reveal that the highest values of PGA, PGV, and PGD are observed at Ras Gharib city (epicentral distance ∼ 11 km) as 67 cm/s2, 2.53 cm/s, and 0.45 cm respectively for Zone A, and as 26.5 cm/s2, 1.0 cm/s, and 0.2 cm respectively for Zone B, while the lowest values of PGA, PGV, and PGD are observed at Suez city (epicentral distance ∼ 190 km) as 3.0 cm/s2, 0.2 cm/s, and 0.05 cm/s respectively for Zone A, and as 1.3 cm/s2, 0.1 cm/s, and 0.024 cm respectively for Zone B. Also the highest PSA values are observed in Ras Gharib city as 200 cm/s2 and 78 cm/s2 for Zone A and Zone B respectively, while the lowest PSA values are observed in Suez city as 7 cm/s2 and 3 cm/s2 for Zone A and Zone B respectively. These results show a good agreement with the earthquake magnitude, epicentral distances, and site characterizations as well.

Toppling analysis of the Echo Cliffs precariously balanced rock

USGS Publications Warehouse

Veeraraghavan, Swetha; Hudnut, Kenneth W.; Krishnan, Swaminathan

2017-01-01

Toppling analysis of a precariously balanced rock (PBR) can provide insight into the nature of ground motion that has not occurred at that location in the past and, by extension, can constrain peak ground motions for use in engineering design. Earlier approaches have targeted 2D models of the rock or modeled the rock–pedestal contact using spring‐damper assemblies that require recalibration for each rock. Here, a method to model PBRs in 3D is presented through a case study of the Echo Cliffs PBR. The 3D model is created from a point cloud of the rock, the pedestal, and their interface, obtained using terrestrial laser scanning. The dynamic response of the model under earthquake excitation is simulated using a rigid‐body dynamics algorithm. The veracity of this approach is demonstrated through comparisons against data from shake‐table experiments. Fragility maps for toppling probability of the Echo Cliffs PBR as a function of various ground‐motion parameters, rock–pedestal interface friction coefficient, and excitation direction are presented. These fragility maps indicate that the toppling probability of this rock is low (less than 0.2) for peak ground acceleration (PGA) and peak ground velocity (PGV) lower than 3  m/s2 and 0.75  m/s, respectively, suggesting that the ground‐motion intensities at this location from earthquakes on nearby faults have most probably not exceeded the above‐mentioned PGA and PGV during the age of the PBR. Additionally, the fragility maps generated from this methodology can also be directly coupled with existing probabilistic frameworks to obtain direct constraints on unexceeded ground motion at a PBR’s location.

Instrumental intensity distribution for the Hector Mine, California, and the Chi-Chi, Taiwan, earthquakes: Comparison of two methods

USGS Publications Warehouse

Sokolov, V.; Wald, D.J.

2002-01-01

We compare two methods of seismic-intensity estimation from ground-motion records for the two recent strong earthquakes: the 1999 (M 7.1) Hector Mine, California, and the 1999 (M 7.6) Chi-Chi, Taiwan. The first technique utilizes the peak ground acceleration (PGA) and velocity (PGV), and it is used for rapid generation of the instrumental intensity map in California. The other method is based on the revised relationships between intensity and Fourier amplitude spectrum (FAS). The results of using the methods are compared with independently observed data and between the estimations from the records. For the case of the Hector Mine earthquake, the calculated intensities in general agree with the observed values. For the case of the Chi-Chi earthquake, the areas of maximum calculated intensity correspond to the areas of the greatest damage and highest number of fatalities. However, the FAS method producees higher-intensity values than those of the peak amplitude method. The specific features of ground-motion excitation during the large, shallow, thrust earthquake may be considered a reason for the discrepancy. The use of PGA and PGV is simple; however, the use of FAS provides a natural consideration of site amplification by means of generalized or site-specific spectral ratios. Because the calculation of seismic-intensity maps requires rapid processing of data from a large network, it is very practical to generate a "first-order" map from the recorded peak motions. Then, a "second-order" map may be compiled using an amplitude-spectra method on the basis of available records and numerical modeling of the site-dependent spectra for the regions of sparse station spacing.

On the dependency of the decay of ground motion peak values with distance for small and large earthquakes

NASA Astrophysics Data System (ADS)

Dujardin, Alain; Courboulex, Françoise; Causse, Matthieu; Traversa, Paola; Monfret, Tony

2013-04-01

Ground motion decay with distance presents a clear magnitude dependence, PGA values of small events decreasing faster than those of larger events. This observation is now widely accepted and often taken into account in recent ground motion prediction equations (Anderson 2005, Akkar & Bommer 2010). The aim of this study is to investigate the origin of this dependence, which has not been clearly identified yet. Two main hypotheses are considered. On one hand the difference of ground motion decay is related to an attenuation effect, on the other hand the difference is related to an effect of extended fault (Anderson 2000). To study the role of attenuation, we realized synthetic tests using the stochastic simulation program SMSIM from Boore (2005). We build a set of simulations from several magnitudes and epicentral distances, and observe that the decay in PGA values is strongly dependent on the spectral shape of the Fourier spectra, which in turn strongly depends on the attenuation factor (Q(f) or kappa). We found that, for a point source approximation and an infinite value of Q (no attenuation) there is no difference between small and large events and that this difference increases when Q decreases. Theses results show that the influence of attenuation on spectral shape is different for earthquakes of different magnitude. In fact the influence of attenuation, which is more important at higher frequency, is larger for small earthquakes, whose Fourier acceleration spectrum has predominantly higher frequencies. We then study the effect of extended source using complete waveform simulations in a 1D model. We find that when the duration of the source time function increases, there is a larger probability to obtain large PGA values at equivalent distances. This effect could also play an important role in the PGA decay with magnitude and distance. Finally we compare these results with real datasets from the Japanese accelerometric network KIK-net.

Application and evaluation of a rapid response earthquake-triggered landslide model to the 25 April 2015 Mw 7.8 Gorkha earthquake, Nepal

USGS Publications Warehouse

Gallen, Sean F.; Clark, Marin K.; Godt, Jonathan W.; Roback, Kevin; Niemi, Nathan A

2017-01-01

The 25 April 2015 Mw 7.8 Gorkha earthquake produced strong ground motions across an approximately 250 km by 100 km swath in central Nepal. To assist disaster response activities, we modified an existing earthquake-triggered landslide model based on a Newmark sliding block analysis to estimate the extent and intensity of landsliding and landslide dam hazard. Landslide hazard maps were produced using Shuttle Radar Topography Mission (SRTM) digital topography, peak ground acceleration (PGA) information from the U.S. Geological Survey (USGS) ShakeMap program, and assumptions about the regional rock strength based on end-member values from previous studies. The instrumental record of seismicity in Nepal is poor, so PGA estimates were based on empirical Ground Motion Prediction Equations (GMPEs) constrained by teleseismic data and felt reports. We demonstrate a non-linear dependence of modeled landsliding on aggregate rock strength, where the number of landslides decreases exponentially with increasing rock strength. Model estimates are less sensitive to PGA at steep slopes (> 60°) compared to moderate slopes (30–60°). We compare forward model results to an inventory of landslides triggered by the Gorkha earthquake. We show that moderate rock strength inputs over estimate landsliding in regions beyond the main slip patch, which may in part be related to poorly constrained PGA estimates for this event at far distances from the source area. Directly above the main slip patch, however, the moderate strength model accurately estimates the total number of landslides within the resolution of the model (landslides ≥ 0.0162 km2; observed n = 2214, modeled n = 2987), but the pattern of landsliding differs from observations. This discrepancy is likely due to the unaccounted for effects of variable material strength and local topographic amplification of strong ground motion, as well as other simplifying assumptions about source characteristics and their relationship to landsliding.

Empirical equations for the prediction of PGA and pseudo spectral accelerations using Iranian strong-motion data

NASA Astrophysics Data System (ADS)

Zafarani, H.; Luzi, Lucia; Lanzano, Giovanni; Soghrat, M. R.

2018-01-01

A recently compiled, comprehensive, and good-quality strong-motion database of the Iranian earthquakes has been used to develop local empirical equations for the prediction of peak ground acceleration (PGA) and 5%-damped pseudo-spectral accelerations (PSA) up to 4.0 s. The equations account for style of faulting and four site classes and use the horizontal distance from the surface projection of the rupture plane as a distance measure. The model predicts the geometric mean of horizontal components and the vertical-to-horizontal ratio. A total of 1551 free-field acceleration time histories recorded at distances of up to 200 km from 200 shallow earthquakes (depth < 30 km) with moment magnitudes ranging from Mw 4.0 to 7.3 are used to perform regression analysis using the random effects algorithm of Abrahamson and Youngs (Bull Seism Soc Am 82:505-510, 1992), which considers between-events as well as within-events errors. Due to the limited data used in the development of previous Iranian ground motion prediction equations (GMPEs) and strong trade-offs between different terms of GMPEs, it is likely that the previously determined models might have less precision on their coefficients in comparison to the current study. The richer database of the current study allows improving on prior works by considering additional variables that could not previously be adequately constrained. Here, a functional form used by Boore and Atkinson (Earthquake Spect 24:99-138, 2008) and Bindi et al. (Bull Seism Soc Am 9:1899-1920, 2011) has been adopted that allows accounting for the saturation of ground motions at close distances. A regression has been also performed for the V/H in order to retrieve vertical components by scaling horizontal spectra. In order to take into account epistemic uncertainty, the new model can be used along with other appropriate GMPEs through a logic tree framework for seismic hazard assessment in Iran and Middle East region.

Analysis of the ground motions from the MW 7.8 Gorkha and MW 7.3 Dolakha earthquakes in Nepal in 2015

NASA Astrophysics Data System (ADS)

Martin, S. S.; Hough, S. E.; Gahalaut, V. K.; Joshi, A.; Landes, M.; Bossu, R.

2016-12-01

While the 25 April 2015 MW7.8 Gorkha, Nepal, earthquake took a heavy toll in Nepal, damage and fatalities were lower than expected. There is thus an urgent need to understand ground motions from the mainshock and largest aftershock. We collected 3,831 accounts of macroseismic effects that include sufficient information to assign intensities. To assess intensities reliably, we apply EMS guidelines with an appreciation for issues associated with macroseismic effects of earthquakes in the Indian subcontinent. We as also analyze 21 available strong motion recordings. Available data are consistent with the peak ground acceleration (PGA) versus intensity relationship of Worden et al. (2012). We use this relationship to estimate peak ground acceleration (PGAEMS) from all intensities. For nearest-fault distances (RRUP<200km), PGAEMS is consistent with the Atkinson and Boore (2003) (AB03) subduction zone ground motion prediction equation (GMPE); at greater distances, instrumental PGA values are consistent with AB03, while PGAEMS is systematically higher. We use PGAEMS values within 200 km to investigate the variability of ground motions using the AB03 GMPE as a baseline. Across the near-field region, PGAEMS is higher by a factor of 2.0-2.5 towards the northern edge of the rupture compared to the near-field region nearer to the southern, up-dip edge of the rupture. Inferred de-amplification in the deepest part of the Kathmandu valley supports the conclusion that former lake-bed sediments experienced a pervasive non-linear response during the mainshock (Dixit et al., 2015). Ground motions were amplified in the southern Gangetic basin, but were relatively low in the northern basin. The overall distribution of ground motions and damage during the Gorkha earthquake thus reflects a combination of complex source, path, and site effects. We also analyze ground motions for the 12 May 2015 Dolakha aftershock, which we conclude was likely a high stress-drop event.

Seismic hazards at Kilauea and Mauna Loa volcanoes, Hawaii

NASA Astrophysics Data System (ADS)

Klein, Fred W.

1994-04-01

A significant seismic hazard exists in south Hawaii from large tectonic earthquakes that can reach magnitude 8 and intensity XII. This paper quantifies the hazard by estimating the horizontal peak ground acceleration (PGA) in south Hawaii which occurs with a 90% probability of not being exceeded during exposure times from 10 to 250 years. The largest earthquakes occur beneath active, unbuttressed and mobile flanks of volcanos in their shield building stage. The flanks are compressed and pushed laterally by rift zone intrusions. The largest earthquakes are thus not directly caused by volcanic activity. Historic earthquakes (since 1823) and the best Hawaiian Volcano Observatory catalog (since 1970) under the south side of the island define linear frequency-magnitude distributions that imply average recurrence intervals for M greater than 5.5 earthquakes of 3.4-5 years, for M greater than 7 events of 29-44 years, and for M greater than 8 earthquakes of 120-190 years. These estimated recurrences are compatable with the 107 year interval between the two major April 2, 1868 (M(approximately)7.9) and November 29, 1975 (M=7.2) earthquakes. Frequency-magnitude distributions define the activity levels of 19 different seismic source zones for probabilistic ground motion estimations. The available measurements of PGA (33 from 7 moderate earthquakes) are insufficient to define a new attenuation curve. We use the Boore et al. (1993) curve shifted upward by a factor of 1.2 to fit Hawaiian data. Amplification of sites on volcanic ash or unconsolidated soil are about two times those of hard lava sites. On a map for a 50 year exposure time with a 90% probability of not being exceeded, the peak ground accelerations are 1.0 g Kilauea's and Mauna Loa's mobile south flanks and 0.9 g in the Kaoiki seismic zone. This hazard from strong ground shaking is comparable to that near the San Andreas Fault in California or the subduction zone in the Gulf of Alaska.

Interfacial electron transfer of glucose oxidase on poly(glutamic acid)-modified glassy carbon electrode and glucose sensing.

PubMed

Zhou, Xuechou; Tan, Bingcan; Zheng, Xinyu; Kong, Dexian; Li, Qinglu

2015-11-15

The interfacial electron transfer of glucose oxidase (GOx) on a poly(glutamic acid)-modified glassy carbon electrode (PGA/GCE) was investigated. The redox peaks measured for GOx and flavin adenine dinucleotide (FAD) are similar, and the anodic peak of GOx does not increase in the presence of glucose in a mediator-free solution. These indicate that the electroactivity of GOx is not the direct electron transfer (DET) between GOx and PGA/GCE and that the observed electroactivity of GOx is ascribed to free FAD that is released from GOx. However, efficient electron transfer occurred if an appropriate mediator was placed in solution, suggesting that GOx is active. The PGA/GCE-based biosensor showed wide linear response in the range of 0.5-5.5 mM with a low detection limit of 0.12 mM and high sensitivity and selectivity for measuring glucose. Copyright © 2015 Elsevier Inc. All rights reserved.

A Method for Estimation of Death Tolls in Disastrous Earthquake

NASA Astrophysics Data System (ADS)

Pai, C.; Tien, Y.; Teng, T.

2004-12-01

Fatality tolls caused by the disastrous earthquake are the one of the most important items among the earthquake damage and losses. If we can precisely estimate the potential tolls and distribution of fatality in individual districts as soon as the earthquake occurrences, it not only make emergency programs and disaster management more effective but also supply critical information to plan and manage the disaster and the allotments of disaster rescue manpower and medicine resources in a timely manner. In this study, we intend to reach the estimation of death tolls caused by the Chi-Chi earthquake in individual districts based on the Attributive Database of Victims, population data, digital maps and Geographic Information Systems. In general, there were involved many factors including the characteristics of ground motions, geological conditions, types and usage habits of buildings, distribution of population and social-economic situations etc., all are related to the damage and losses induced by the disastrous earthquake. The density of seismic stations in Taiwan is the greatest in the world at present. In the meantime, it is easy to get complete seismic data by earthquake rapid-reporting systems from the Central Weather Bureau: mostly within about a minute or less after the earthquake happened. Therefore, it becomes possible to estimate death tolls caused by the earthquake in Taiwan based on the preliminary information. Firstly, we form the arithmetic mean of the three components of the Peak Ground Acceleration (PGA) to give the PGA Index for each individual seismic station, according to the mainshock data of the Chi-Chi earthquake. To supply the distribution of Iso-seismic Intensity Contours in any districts and resolve the problems for which there are no seismic station within partial districts through the PGA Index and geographical coordinates in individual seismic station, the Kriging Interpolation Method and the GIS software, The population density depends on whether the districts are more urbanized or not. As the present researches are concerned, there were not a good and reliable relationship between the mortality and the characteristics of ground motions. We propose the concept of Equal Population Gaps to resolve the influence of mortality in a rural or urban district and decision of the weighting function to each district. The relationship between PGA Index and the mortality determined in this study can be expressed as:\\[M=28.9/[1+exp{(1.67-0.0029 \\times PGA)}] \\] Here M is mortality in %, and PGA is PGA Index in gals. The corresponding curve matches the data reasonably well, with R2=0.91. We process the estimation for districts in different scales to verify the feasibility of the method. The mortality-based on PGA Index is particularly useful in real-time application for death tolls prediction and assessment--a piece of information most critical for post earthquake emergency response operation.

Site specific probabilistic seismic hazard analysis at Dubai Creek on the west coast of UAE

NASA Astrophysics Data System (ADS)

Shama, Ayman A.

2011-03-01

A probabilistic seismic hazard analysis (PSHA) was conducted to establish the hazard spectra for a site located at Dubai Creek on the west coast of the United Arab Emirates (UAE). The PSHA considered all the seismogenic sources that affect the site, including plate boundaries such as the Makran subduction zone, the Zagros fold-thrust region and the transition fault system between them; and local crustal faults in UAE. PSHA indicated that local faults dominate the hazard. The peak ground acceleration (PGA) for the 475-year return period spectrum is 0.17 g and 0.33 g for the 2,475-year return period spectrum. The hazard spectra are then employed to establish rock ground motions using the spectral matching technique.

New Intensity Attenuation in Georgia

NASA Astrophysics Data System (ADS)

Tsereteli, N. S.; Varazanashvili, O.; Tibaldi, A.; Bonali, F.; Gogoladze, Z.; Kvavadze, N.; Kvedelidze, I.

2016-12-01

In seismic-prone zones, increase of urbanization and infrastructures in turn produces increase of seismic risk that is mainly related to: the level of seismic hazard itself, the seismic resistance of dwelling houses, and many other factors. The relevant objectives of the present work is to improve the regional seismic hazard maps of Georgia, by implementing state-of-the art probabilistic seismic hazard assessment techniques and outputs from recent national and international collaborations. Seismic zoning is the identification of zones of similar levels of earthquake hazard. With reference to seismic zoning by ground motion assessment, the shaking intensity essentially depends on i) regional seismicity, ii) attenuation of ground motion with distance, iii) local site effects on ground motion. In the last decade, seismic hazard assessment is presented in terms of Peak Ground Acceleration (PGA), Peak Ground Velocity (PGV), or other recorded parameters. But there are very limited strong motion dataset in Georgia. Furthermore, vulnerability of buildings still is estimated for intensity, and there are no information about correlation between the distribution of ground motion recorded parameters and damage. So, macroseimic Intensity is still a very important parameter for strong ground motion evaluation. In the present work, we calibrated intensity prediction equations (IPE) for the Georgian dataset based on about 78 reviewed earthquakes. Metadata for Intensity (MSK 64 scale) were constrained and predictionequations for various types of distance (epicentral and hypocentral distance, Joyner-Boore distance, closest distance to the fault rupture plane) were calibrated. Relations between intensity and PGA values were derived. For this we used hybrid-empirical ground motion equation derived for Georgia and run scenario earthquakes for events with macroseismic data.

A New Insight into Probabilistic Seismic Hazard Analysis for Central India

NASA Astrophysics Data System (ADS)

Mandal, H. S.; Shukla, A. K.; Khan, P. K.; Mishra, O. P.

2013-12-01

The Son-Narmada-Tapti lineament and its surroundings of Central India (CI) is the second most important tectonic regime following the converging margin along Himalayas-Myanmar-Andaman of the Indian sub-continent, which attracted several geoscientists to assess its seismic hazard potential. Our study area, a part of CI, is bounded between latitudes 18°-26°N and longitudes 73°-83°E, representing a stable part of Peninsular India. Past damaging moderate magnitude earthquakes as well as continuing microseismicity in the area provided enough data for seismological study. Our estimates based on regional Gutenberg-Richter relationship showed lower b values (i.e., between 0.68 and 0.76) from the average for the study area. The Probabilistic Seismic Hazard Analysis carried out over the area with a radius of ~300 km encircling Bhopal yielded a conspicuous relationship between earthquake return period ( T) and peak ground acceleration (PGA). Analyses of T and PGA shows that PGA value at bedrock varies from 0.08 to 0.15 g for 10 % ( T = 475 years) and 2 % ( T = 2,475 years) probabilities exceeding 50 years, respectively. We establish the empirical relationships and between zero period acceleration (ZPA) and shear wave velocity up to a depth of 30 m [ V s (30)] for the two different return periods. These demonstrate that the ZPA values decrease with increasing shear wave velocity, suggesting a diagnostic indicator for designing the structures at a specific site of interest. The predictive designed response spectra generated at a site for periods up to 4.0 s at 10 and 2 % probability of exceedance of ground motion for 50 years can be used for designing duration dependent structures of variable vertical dimension. We infer that this concept of assimilating uniform hazard response spectra and predictive design at 10 and 2 % probability of exceedance in 50 years at 5 % damping at bedrocks of different categories may offer potential inputs for designing earthquake resistant structures of variable dimensions for the CI region under the National Earthquake Hazard Reduction Program for India.

Performance-based methodology for assessing seismic vulnerability and capacity of buildings

NASA Astrophysics Data System (ADS)

Shibin, Lin; Lili, Xie; Maosheng, Gong; Ming, Li

2010-06-01

This paper presents a performance-based methodology for the assessment of seismic vulnerability and capacity of buildings. The vulnerability assessment methodology is based on the HAZUS methodology and the improved capacitydemand-diagram method. The spectral displacement ( S d ) of performance points on a capacity curve is used to estimate the damage level of a building. The relationship between S d and peak ground acceleration (PGA) is established, and then a new vulnerability function is expressed in terms of PGA. Furthermore, the expected value of the seismic capacity index (SCev) is provided to estimate the seismic capacity of buildings based on the probability distribution of damage levels and the corresponding seismic capacity index. The results indicate that the proposed vulnerability methodology is able to assess seismic damage of a large number of building stock directly and quickly following an earthquake. The SCev provides an effective index to measure the seismic capacity of buildings and illustrate the relationship between the seismic capacity of buildings and seismic action. The estimated result is compared with damage surveys of the cities of Dujiangyan and Jiangyou in the M8.0 Wenchuan earthquake, revealing that the methodology is acceptable for seismic risk assessment and decision making. The primary reasons for discrepancies between the estimated results and the damage surveys are discussed.

Development of damage probability matrices based on Greek earthquake damage data

NASA Astrophysics Data System (ADS)

Eleftheriadou, Anastasia K.; Karabinis, Athanasios I.

2011-03-01

A comprehensive study is presented for empirical seismic vulnerability assessment of typical structural types, representative of the building stock of Southern Europe, based on a large set of damage statistics. The observational database was obtained from post-earthquake surveys carried out in the area struck by the September 7, 1999 Athens earthquake. After analysis of the collected observational data, a unified damage database has been created which comprises 180,945 damaged buildings from/after the near-field area of the earthquake. The damaged buildings are classified in specific structural types, according to the materials, seismic codes and construction techniques in Southern Europe. The seismic demand is described in terms of both the regional macroseismic intensity and the ratio α g/ a o, where α g is the maximum peak ground acceleration (PGA) of the earthquake event and a o is the unique value PGA that characterizes each municipality shown on the Greek hazard map. The relative and cumulative frequencies of the different damage states for each structural type and each intensity level are computed in terms of damage ratio. Damage probability matrices (DPMs) and vulnerability curves are obtained for specific structural types. A comparison analysis is fulfilled between the produced and the existing vulnerability models.

Considerations in comparing the U.S. Geological Survey one‐year induced‐seismicity hazard models with “Did You Feel It?” and instrumental data

USGS Publications Warehouse

White, Isabel; Liu, Taojun; Luco, Nicolas; Liel, Abbie

2017-01-01

The recent steep increase in seismicity rates in Oklahoma, southern Kansas, and other parts of the central United States led the U.S. Geological Survey (USGS) to develop, for the first time, a probabilistic seismic hazard forecast for one year (2016) that incorporates induced seismicity. In this study, we explore a process to ground‐truth the hazard model by comparing it with two databases of observations: modified Mercalli intensity (MMI) data from the “Did You Feel It?” (DYFI) system and peak ground acceleration (PGA) values from instrumental data. Because the 2016 hazard model was heavily based on earthquake catalogs from 2014 to 2015, this initial comparison utilized observations from these years. Annualized exceedance rates were calculated with the DYFI and instrumental data for direct comparison with the model. These comparisons required assessment of the options for converting hazard model results and instrumental data from PGA to MMI for comparison with the DYFI data. In addition, to account for known differences that affect the comparisons, the instrumental PGA and DYFI data were declustered, and the hazard model was adjusted for local site conditions. With these adjustments, examples at sites with the most data show reasonable agreement in the exceedance rates. However, the comparisons were complicated by the spatial and temporal completeness of the instrumental and DYFI observations. Furthermore, most of the DYFI responses are in the MMI II–IV range, whereas the hazard model is oriented toward forecasts at higher ground‐motion intensities, usually above about MMI IV. Nevertheless, the study demonstrates some of the issues that arise in making these comparisons, thereby informing future efforts to ground‐truth and improve hazard modeling for induced‐seismicity applications.

The ShakeOut earthquake source and ground motion simulations

USGS Publications Warehouse

Graves, R.W.; Houston, Douglas B.; Hudnut, K.W.

2011-01-01

The ShakeOut Scenario is premised upon the detailed description of a hypothetical Mw 7.8 earthquake on the southern San Andreas Fault and the associated simulated ground motions. The main features of the scenario, such as its endpoints, magnitude, and gross slip distribution, were defined through expert opinion and incorporated information from many previous studies. Slip at smaller length scales, rupture speed, and rise time were constrained using empirical relationships and experience gained from previous strong-motion modeling. Using this rupture description and a 3-D model of the crust, broadband ground motions were computed over a large region of Southern California. The largest simulated peak ground acceleration (PGA) and peak ground velocity (PGV) generally range from 0.5 to 1.0 g and 100 to 250 cm/s, respectively, with the waveforms exhibiting strong directivity and basin effects. Use of a slip-predictable model results in a high static stress drop event and produces ground motions somewhat higher than median level predictions from NGA ground motion prediction equations (GMPEs).

A Moment Rate Function Deduced from Peak Ground Motions from M 3.3-5.3 Earthquakes: Implications for Scaling, Corner Frequency and Stress Drop

NASA Astrophysics Data System (ADS)

Archuleta, R. J.; Ji, C.

2016-12-01

Based on 3827 records of peak horizontal ground motions in the NGA-West2 database we computed linear regressions for Log PGA, Log PGV and the ratio PGA/2πPGV (which we call dominant frequency, DomF) versus moment magnitude for M 3.3-5.3 earthquakes. The slopes are nearly one for Log PGA and Log PGV and negative one for PGA/PGV. For magnitudes 5.3 and smaller the source can be treated as a point source. Using these regressions and an expression between the half peak-to-peak amplitude of Wood Anderson records (PWA) and moment magnitude, we have deduced an `apparent' moment rate function (aMRF) that increases quadratically in time until it reaches its maximum at time tp after which it decays linearly until a final duration td. For t*=0.054 s and with parameters tp and td scaling with seismic moment, tp(M0) = 0.03[M0/ M0(M=3.3)]1/7.0 and td(M0) = 0.31[M0/ M0(M=3.3)]1/3.3 . all the magnitude dependence within M 3.3-5.3 can be explained. The Fourier amplitude spectrum (FAS) of the aMRF has two corner frequencies connected by an intermediate slope of f-1. The smaller corner frequency fC 1/ td, i.e., a corner frequency related to the full duration. Stress drop associated with the average over the fault scales weakly with seismic moment Δσ M00.09. The larger corner frequency is proportional to 1/ tp. We also find that DomF ≈ 1/[2.2(tp(M0) + t*)], thus there is a strong tradeoff between tp and t*. The higher corner frequency and the intermediate slope in the spectrum could be completely obscured by t* for t* 0.04-0.06 s, producing a Brune-type spectrum. If so, it will be practically impossible to retrieve the true spectrum. Because the fC derived from the spectrum is controlled by td while PGA and PGV are controlled mostly by the time scale tp, this aMRF could explain the difference in uncertainty of the mean stress drop inferred from peak ground motion data and that inferred from displacement amplitude spectra. This aMRF is consistent with a rupture that initiates from a critical crack length, e.g., Campillo and Ionescu (1997), Ohnaka (2000). In such a scenario, the peak time corresponds to rupture of the critical crack length with a stress change corresponding to breakdown stress, not stress drop. This is consistent with a stress parameter for predicting ground motion larger than the stress drop generally found by spectral studies.

Calibration of strong motion models for Central America region and its use in seismic hazard assessment

NASA Astrophysics Data System (ADS)

Climent, A.; Benito, M. B.; Piedra, R.; Lindholm, C.; Gaspar-Escribano, J.

2013-05-01

We present the results of a study aimed at choosing the more suitable strong-motion models for seismic hazard analysis in the Central America (CA) Region. After a careful revision of the state of the art, different models developed for subduction and volcanic crustal zones, in tectonic environment similar to those of CA, were selected. These models were calibrated with accelerograms recorded in Costa Rica, Nicaragua and El Salvador. The peak ground acceleration PGA and Spectral Acceleration SA (T) derived from the records were compared with the ones predicted by the models in similar conditions of magnitude, distance and soil. The type of magnitude (Ms, Mb, MW), distance (Rhyp, Rrup, etc) and ground motion parameter (maximum horizontal component, geometrical mean, etc ) was taken into account in the comparison with the real data. As results of the analysis, the models which present a best fit with the local data were identified. These models have been applied for carrying out seismic hazard analysis in the region, in the frame of the RESIS II project financed by the Norwegian Foreign Department and also by the Spanish project SISMOCAES. The methodology followed is based on the direct comparison between PGA and SA 5 % damped response values extracted from actual records with the corresponding acceleration values predicted by the selected ground-motion models for similar magnitude, distance and soil conditions. Residuals between observed and predicted values for PGA, and SA (1sec) are calculated and plotted as a function of distance and magnitude, analyzing their deviation from the mean value. Besides and most important, a statistical analysis of the normalized residuals was carry out using the criteria proposed by Scherbaum et al. (2004), which consists in categorizing ground motion models based in a likelihood parameter that reflects the goodness-of-fit of the median values as well as the shape of the underlying distribution of ground motion residuals. Considering the results of the both analysis the conclusions can be drawn in the following paragraphs. Analyses of residuals show that in some cases the best adjustments of PGA and SA values do not always favor the same equation. Consequently, the following equations that present reasonable adjustments for both parameters are finally selected: Schmidt (2010) and Zhao et al (2006) for shallow crustal sources; Schmidt (2010), Zhao et al (2006), Youngs et al. (1997) and Lin & Lee (2008) for subduction interface and Schmidt (2010), Youngs et al (1997), Zhao et al (2006) and Garcia et al (2005) for inslab subduction sources. Finally, to improve the development of proper models of attenuation of the region, it is recommended to the governmental and private institutions, to support the implementation of permanent strong ground motion networks in all Central America countries, especially in Guatemala, Honduras, Nicaragua and Panama, including free field stations. In case of Costa Rica and El Salvador to strengthen the networks that already they operate.

An extended stochastic method for seismic hazard estimation

NASA Astrophysics Data System (ADS)

Abd el-aal, A. K.; El-Eraki, M. A.; Mostafa, S. I.

2015-12-01

In this contribution, we developed an extended stochastic technique for seismic hazard assessment purposes. This technique depends on the hypothesis of stochastic technique of Boore (2003) "Simulation of ground motion using the stochastic method. Appl. Geophy. 160:635-676". The essential characteristics of extended stochastic technique are to obtain and simulate ground motion in order to minimize future earthquake consequences. The first step of this technique is defining the seismic sources which mostly affect the study area. Then, the maximum expected magnitude is defined for each of these seismic sources. It is followed by estimating the ground motion using an empirical attenuation relationship. Finally, the site amplification is implemented in calculating the peak ground acceleration (PGA) at each site of interest. We tested and applied this developed technique at Cairo, Suez, Port Said, Ismailia, Zagazig and Damietta cities to predict the ground motion. Also, it is applied at Cairo, Zagazig and Damietta cities to estimate the maximum peak ground acceleration at actual soil conditions. In addition, 0.5, 1, 5, 10 and 20 % damping median response spectra are estimated using the extended stochastic simulation technique. The calculated highest acceleration values at bedrock conditions are found at Suez city with a value of 44 cm s-2. However, these acceleration values decrease towards the north of the study area to reach 14.1 cm s-2 at Damietta city. This comes in agreement with the results of previous studies of seismic hazards in northern Egypt and is found to be comparable. This work can be used for seismic risk mitigation and earthquake engineering purposes.

Evaluation Seismicity west of block-lut for Deterministic Seismic Hazard Assessment of Shahdad ,Iran

NASA Astrophysics Data System (ADS)

Ney, B.; Askari, M.

2009-04-01

Evaluation Seismicity west of block-lut for Deterministic Seismic Hazard Assessment of Shahdad ,Iran Behnoosh Neyestani , Mina Askari Students of Science and Research University,Iran. Seismic Hazard Assessment has been done for Shahdad city in this study , and four maps (Kerman-Bam-Nakhil Ab-Allah Abad) has been prepared to indicate the Deterministic estimate of Peak Ground Acceleration (PGA) in this area. Deterministic Seismic Hazard Assessment has been preformed for a region in eastern Iran (Shahdad) based on the available geological, seismological and geophysical information and seismic zoning map of region has been constructed. For this assessment first Seimotectonic map of study region in a radius of 100km is prepared using geological maps, distribution of historical and instrumental earthquake data and focal mechanism solutions it is used as the base map for delineation of potential seismic sources. After that minimum distance, for every seismic sources until site (Shahdad) and maximum magnitude for each source have been determined. In Shahdad ,according to results, peak ground acceleration using the Yoshimitsu Fukushima &Teiji Tanaka'1990 attenuation relationship is estimated to be 0.58 g, that is related to the movement of nayband fault with distance 2.4km of the site and maximum magnitude Ms=7.5.

Site correction of stochastic simulation in southwestern Taiwan

NASA Astrophysics Data System (ADS)

Lun Huang, Cong; Wen, Kuo Liang; Huang, Jyun Yan

2014-05-01

Peak ground acceleration (PGA) of a disastrous earthquake, is concerned both in civil engineering and seismology study. Presently, the ground motion prediction equation is widely used for PGA estimation study by engineers. However, the local site effect is another important factor participates in strong motion prediction. For example, in 1985 the Mexico City, 400km far from the epicenter, suffered massive damage due to the seismic wave amplification from the local alluvial layers. (Anderson et al., 1986) In past studies, the use of stochastic method had been done and showed well performance on the simulation of ground-motion at rock site (Beresnev and Atkinson, 1998a ; Roumelioti and Beresnev, 2003). In this study, the site correction was conducted by the empirical transfer function compared with the rock site response from stochastic point-source (Boore, 2005) and finite-fault (Boore, 2009) methods. The error between the simulated and observed Fourier spectrum and PGA are calculated. Further we compared the estimated PGA to the result calculated from ground motion prediction equation. The earthquake data used in this study is recorded by Taiwan Strong Motion Instrumentation Program (TSMIP) from 1991 to 2012; the study area is located at south-western Taiwan. The empirical transfer function was generated by calculating the spectrum ratio between alluvial site and rock site (Borcheret, 1970). Due to the lack of reference rock site station in this area, the rock site ground motion was generated through stochastic point-source model instead. Several target events were then chosen for stochastic point-source simulating to the halfspace. Then, the empirical transfer function for each station was multiplied to the simulated halfspace response. Finally, we focused on two target events: the 1999 Chi-Chi earthquake (Mw=7.6) and the 2010 Jiashian earthquake (Mw=6.4). Considering the large event may contain with complex rupture mechanism, the asperity and delay time for each sub-fault is to be concerned. Both the stochastic point-source and the finite-fault model were used to check the result of our correction.

Seismic hazard maps of Mexico, the Caribbean, and Central and South America

USGS Publications Warehouse

Tanner, J.G.; Shedlock, K.M.

2004-01-01

The growth of megacities in seismically active regions around the world often includes the construction of seismically unsafe buildings and infrastructures due to an insufficient knowledge of existing seismic hazard and/or economic constraints. Minimization of the loss of life, property damage, and social and economic disruption due to earthquakes depends on reliable estimates of seismic hazard. We have produced a suite of seismic hazard estimates for Mexico, the Caribbean, and Central and South America. One of the preliminary maps in this suite served as the basis for the Caribbean and Central and South America portion of the Global Seismic Hazard Map (GSHM) published in 1999, which depicted peak ground acceleration (pga) with a 10% chance of exceedance in 50 years for rock sites. Herein we present maps depicting pga and 0.2 and 1.0 s spectral accelerations (SA) with 50%, 10%, and 2% chances of exceedance in 50 years for rock sites. The seismicity catalog used in the generation of these maps adds 3 more years of data to those used to calculate the GSH Map. Different attenuation functions (consistent with those used to calculate the U.S. and Canadian maps) were used as well. These nine maps are designed to assist in global risk mitigation by providing a general seismic hazard framework and serving as a resource for any national or regional agency to help focus further detailed studies required for regional/local needs. The largest seismic hazard values in Mexico, the Caribbean, and Central and South America generally occur in areas that have been, or are likely to be, the sites of the largest plate boundary earthquakes. High hazard values occur in areas where shallow-to-intermediate seismicity occurs frequently. ?? 2004 Elsevier B.V. All rights reserved.

Modeling of induced seismicity and ground vibrations associated with geologic CO 2 storage, and assessing their effects on surface structures and human perception

DOE PAGES

Rutqvist, Jonny; Cappa, Frédéric; Rinaldi, Antonio P.; ...

2014-05-01

In this paper, we present model simulations of ground motions caused by CO 2 -injection-induced fault reactivation and analyze the results in terms of the potential for damage to ground surface structures and nuisance to the local human population. It is an integrated analysis from cause to consequence, including the whole chain of processes starting from earthquake inception in the subsurface, wave propagation toward the ground surface, and assessment of the consequences of ground vibration. For a small magnitude (M w =3) event at a hypocenter depth of about 1000m, we first used the simulated ground-motion wave train in anmore » inverse analysis to estimate source parameters (moment magnitude, rupture dimensions and stress drop), achieving good agreement and thereby verifying the modeling of the chain of processes from earthquake inception to ground vibration. We then analyzed the ground vibration results in terms of peak ground acceleration (PGA), peak ground velocity (PGV) and frequency content, with comparison to U.S. Geological Survey's instrumental intensity scales for earthquakes and the U.S. Bureau of Mines' vibration criteria for cosmetic damage to buildings, as well as human-perception vibration limits. Our results confirm the appropriateness of using PGV (rather than PGA) and frequency for the evaluation of potential ground-vibration effects on structures and humans from shallow injection-induced seismic events. For the considered synthetic M w =3 event, our analysis showed that the short duration, high frequency ground motion may not cause any significant damage to surface structures, but would certainly be felt by the local population.« less

The Long-term Impacts of Earthquakes on Economic Growth

NASA Astrophysics Data System (ADS)

Lackner, S.

2016-12-01

The social science literature has so far not reached a consensus on whether and how earthquakes actually impact economic growth in the long-run. Several hypotheses have been suggested and some even argue for a positive impact. A general weakness in the literature, however, is the predominant use of inadequate measures for the exogenous natural hazard of an earthquake. The most common problems are the lack of individual event size (e.g. earthquake dummy or number of events), the use of magnitude instead of a measure for surface shaking, and endogeneity issues when traditional qualitative intensity scales or actual impact data is used. Here we use peak ground acceleration (PGA) as the ground motion intensity measure and investigate the impacts of earthquake shaking on long-run economic growth. We construct a data set from USGS ShakeMaps that can be considered the universe of global relevant earthquake ground shaking from 1973 to 2014. This data set is then combined with World Bank GDP data to conduct a regression analysis. Furthermore, the impacts of PGA on different industries and other economic variables such as employment and education are also investigated. This will on one hand help to identify the mechanism of how earthquakes impact long-run growth and also show potential impacts on other welfare indicators that are not captured by GDP. This is the first application of global earthquake shaking data to investigate long-term earthquake impacts.

Earthquake hazard and risk assessment based on Unified Scaling Law for Earthquakes: Greater Caucasus and Crimea

NASA Astrophysics Data System (ADS)

Kossobokov, Vladimir G.; Nekrasova, Anastasia K.

2018-05-01

We continue applying the general concept of seismic risk analysis in a number of seismic regions worldwide by constructing regional seismic hazard maps based on morphostructural analysis, pattern recognition, and the Unified Scaling Law for Earthquakes (USLE), which generalizes the Gutenberg-Richter relationship making use of naturally fractal distribution of earthquake sources of different size in a seismic region. The USLE stands for an empirical relationship log10 N(M, L) = A + B·(5 - M) + C·log10 L, where N(M, L) is the expected annual number of earthquakes of a certain magnitude M within a seismically prone area of linear dimension L. We use parameters A, B, and C of USLE to estimate, first, the expected maximum magnitude in a time interval at seismically prone nodes of the morphostructural scheme of the region under study, then map the corresponding expected ground shaking parameters (e.g., peak ground acceleration, PGA, or macro-seismic intensity). After a rigorous verification against the available seismic evidences in the past (usually, the observed instrumental PGA or the historically reported macro-seismic intensity), such a seismic hazard map is used to generate maps of specific earthquake risks for population, cities, and infrastructures (e.g., those based on census of population, buildings inventory). The methodology of seismic hazard and risk assessment is illustrated by application to the territory of Greater Caucasus and Crimea.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rutqvist, Jonny; Cappa, Frederic; Rinaldi, Antonio P.

We summarize recent modeling studies of injection-induced fault reactivation, seismicity, and its potential impact on surface structures and nuisance to the local human population. We used coupled multiphase fluid flow and geomechanical numerical modeling, dynamic wave propagation modeling, seismology theories, and empirical vibration criteria from mining and construction industries. We first simulated injection-induced fault reactivation, including dynamic fault slip, seismic source, wave propagation, and ground vibrations. From co-seismic average shear displacement and rupture area, we determined the moment magnitude to about M w = 3 for an injection-induced fault reactivation at a depth of about 1000 m. We then analyzedmore » the ground vibration results in terms of peak ground acceleration (PGA), peak ground velocity (PGV), and frequency content, with comparison to the U.S. Bureau of Mines’ vibration criteria for cosmetic damage to buildings, as well as human-perception vibration limits. For the considered synthetic M w = 3 event, our analysis showed that the short duration, high frequency ground motion may not cause any significant damage to surface structures, and would not cause, in this particular case, upward CO 2 leakage, but would certainly be felt by the local population.« less

Enhanced Production of Poly-γ-glutamic Acid by Bacillus licheniformis TISTR 1010 with Environmental Controls.

PubMed

Kongklom, Nuttawut; Shi, Zhongping; Chisti, Yusuf; Sirisansaneeyakul, Sarote

2017-07-01

Bacillus licheniformis TISTR 1010 was used for glutamic acid-independent production of poly-γ-glutamic acid (γ-PGA). A fed-batch production strategy was developed involving feedings of glucose, citric acid, and ammonium chloride at specified stages of the fermentation. With the dissolved oxygen concentration controlled at ≥50% of air saturation and the pH controlled at ~7.4, the fed-batch operation at 37 °C afforded a peak γ-PGA concentration of 39.9 ± 0.3 g L -1 with a productivity of 0.926 ± 0.006 g L -1  h -1 . The observed productivity was nearly threefold greater than previously reported for glutamic acid-independent production using the strain TISTR 1010. The molecular weight of γ-PGA was in the approximate range of 60 to 135 kDa.

An updated geospatial liquefaction model for global application

USGS Publications Warehouse

Zhu, Jing; Baise, Laurie G.; Thompson, Eric M.

2017-01-01

We present an updated geospatial approach to estimation of earthquake-induced liquefaction from globally available geospatial proxies. Our previous iteration of the geospatial liquefaction model was based on mapped liquefaction surface effects from four earthquakes in Christchurch, New Zealand, and Kobe, Japan, paired with geospatial explanatory variables including slope-derived VS30, compound topographic index, and magnitude-adjusted peak ground acceleration from ShakeMap. The updated geospatial liquefaction model presented herein improves the performance and the generality of the model. The updates include (1) expanding the liquefaction database to 27 earthquake events across 6 countries, (2) addressing the sampling of nonliquefaction for incomplete liquefaction inventories, (3) testing interaction effects between explanatory variables, and (4) overall improving model performance. While we test 14 geospatial proxies for soil density and soil saturation, the most promising geospatial parameters are slope-derived VS30, modeled water table depth, distance to coast, distance to river, distance to closest water body, and precipitation. We found that peak ground velocity (PGV) performs better than peak ground acceleration (PGA) as the shaking intensity parameter. We present two models which offer improved performance over prior models. We evaluate model performance using the area under the curve under the Receiver Operating Characteristic (ROC) curve (AUC) and the Brier score. The best-performing model in a coastal setting uses distance to coast but is problematic for regions away from the coast. The second best model, using PGV, VS30, water table depth, distance to closest water body, and precipitation, performs better in noncoastal regions and thus is the model we recommend for global implementation.

Earthquake Hazard Analysis Use Vs30 Data In Palu

NASA Astrophysics Data System (ADS)

Rusydi, Muhammad; Efendi, Rustan; Sandra; Rahmawati

2018-03-01

Palu City is an area passed by Palu-Koro fault and some small faults around it, causing the Palu of city often hit by earthquake. Therefore, this study is intended to mapped the earthquake hazard zones. Determination of this zone is one of aspect that can be used to reducing risk of earthquake disaster. This research was conducted by integrating Vs30 data from USGS with Vs30 from mikrotremor data. Vs30 data from microtremor used to correction Vs30 from USGS. This Results are then used to determine PeakGround Acceleration (PGA) can be used to calculate the impact of earthquake disaster. Results of the study shows that Palu City is in high danger class. Eight sub-districts in Palu City, there are 7 sub-districts that have high danger level, namely Palu Barat, PaluTimur, Palu Selatan, Palu Utara, Tatanga, Mantikulore and Tawaeli.

Comparison of Ground Motion Prediction Equations (GMPE) for Chile and Canada With Recent Chilean Megathust Earthquakes

NASA Astrophysics Data System (ADS)

Herrera, C.; Cassidy, J. F.; Dosso, S. E.

2017-12-01

The ground shaking assessment allows quantifying the hazards associated with the occurrence of earthquakes. Chile and western Canada are two areas that have experienced, and are susceptible to imminent large crustal, in-slab and megathrust earthquakes that can affect the population significantly. In this context, we compare the current GMPEs used in the 2015 National Building Code of Canada and the most recent GMPEs calculated for Chile, with observed accelerations generated by four recent Chilean megathrust earthquakes (MW ≥ 7.7) that have occurred during the past decade, which is essential to quantify how well current models predict observations of major events.We collected the 3-component waveform data of more than 90 stations from the Centro Sismologico Nacional and the Universidad de Chile, and processed them by removing the trend and applying a band-pass filter. Then, for each station, we obtained the Peak Ground Acceleration (PGA), and by using a damped response spectra, we calculated the Pseudo Spectral Acceleration (PSA). Finally, we compared those observations with the most recent Chilean and Canadian GMPEs. Given the lack of geotechnical information for most of the Chilean stations, we also used a new method to obtain the VS30 by inverting the H/V ratios using a trans-dimensional Bayesian inversion, which allows us to improve the correction of observations according to soil conditions.As expected, our results show a good fit between observations and the Chilean GMPEs, but we observe that although the shape of the Canadian GMPEs is coherent with the distribution of observations, in general they under predict the observations for PGA and PSA at shorter periods for most of the considered earthquakes. An example of this can be seen in the attached figure for the case of the 2014 Iquique earthquake.These results present important implications related to the hazards associated to large earthquakes, especially for western Canada, where the probability of a large (MW 9.0) subduction earthquake is about 10-15% in the next 50 years. We discuss the reasons for the observed differences for the Canadian GMPEs, where one of the most relevant factors would be the different dataset used for their calculation.

Co-seismic landslide topographic analysis based on multi-temporal DEM-A case study of the Wenchuan earthquake.

PubMed

Ren, Zhikun; Zhang, Zhuqi; Dai, Fuchu; Yin, Jinhui; Zhang, Huiping

2013-01-01

Hillslope instability has been thought to be one of the most important factors for landslide susceptibility. In this study, we apply geomorphic analysis using multi-temporal DEM data and shake intensity analysis to evaluate the topographic characteristics of the landslide areas. There are many geomorphologic analysis methods such as roughness, slope aspect, which are also as useful as slope analysis. The analyses indicate that most of the co-seismic landslides occurred in regions with roughness, hillslope and slope aspect of >1.2, >30, and between 90 and 270, respectively. However, the intersection regions from the above three methods are more accurate than that derived by applying single topographic analysis method. The ground motion data indicates that the co-seismic landslides mainly occurred on the hanging wall side of Longmen Shan Thrust Belt within the up-down and horizontal peak ground acceleration (PGA) contour of 150 PGA and 200 gal, respectively. The comparisons of pre- and post-earthquake DEM data indicate that the medium roughness and slope increased, the roughest and steepest regions decreased after the Wenchuan earthquake. However, slope aspects did not even change. Our results indicate that co-seismic landslides mainly occurred at specific regions of high roughness, southward and steep sloping areas under strong ground motion. Co-seismic landslides significantly modified the local topography, especially the hillslope and roughness. The roughest relief and steepest slope are significantly smoothed; however, the medium relief and slope become rougher and steeper, respectively.

Earthquake Hazard and Risk Assessment based on Unified Scaling Law for Earthquakes: Altai-Sayan Region

NASA Astrophysics Data System (ADS)

Kossobokov, V. G.; Nekrasova, A.

2017-12-01

We continue applying the general concept of seismic risk analysis in a number of seismic regions worldwide by constructing regional seismic hazard maps based on morphostructural analysis, pattern recognition, and the Unified Scaling Law for Earthquakes, USLE, which generalizes the Gutenberg-Richter relationship making use of naturally fractal distribution of earthquake sources of different size in a seismic region. The USLE stands for an empirical relationship log10N(M, L) = A + B·(5 - M) + C·log10L, where N(M, L) is the expected annual number of earthquakes of a certain magnitude M within an seismically prone area of linear dimension L. We use parameters A, B, and C of USLE to estimate, first, the expected maximum credible magnitude in a time interval at seismically prone nodes of the morphostructural scheme of the region under study, then map the corresponding expected ground shaking parameters (e.g. peak ground acceleration, PGA, or macro-seismic intensity etc.). After a rigorous testing against the available seismic evidences in the past (usually, the observed instrumental PGA or the historically reported macro-seismic intensity), such a seismic hazard map is used to generate maps of specific earthquake risks for population, cities, and infrastructures (e.g., those based on census of population, buildings inventory, etc.). This, USLE based, methodology of seismic hazard and risks assessment is applied to the territory of Altai-Sayan Region, of Russia. The study supported by the Russian Science Foundation Grant No. 15-17-30020.

iShake: Mobile Phones as Seismic Sensors (Invited)

NASA Astrophysics Data System (ADS)

Dashti, S.; Reilly, J.; Bray, J. D.; Bayen, A. M.; Glaser, S. D.; Mari, E.

2010-12-01

Emergency responders must “see” the effects of an earthquake clearly and rapidly so that they can respond effectively to the damage it has produced. Great strides have been made recently in developing methodologies that deliver rapid and accurate post-earthquake information. However, shortcomings still exist. The iShake project is an innovative use of cell phones and information technology to bridge the gap between the high quality, but sparse, ground motion instrument data that are used to help develop ShakeMap and the low quality, but large quantity, human observational data collected to construct a “Did You Feel It?” (DYFI)-based map. Rather than using people as measurement “devices” as is being done through DYFI, the iShake project is using their cell phones to measure ground motion intensity parameters and automatically deliver the data to the U.S. Geological Survey (USGS) for processing and dissemination. In this participatory sensing paradigm, quantitative shaking data from numerous cellular phones will enable the USGS to produce shaking intensity maps more accurately than presently possible. The phone sensor, however, is an imperfect device with performance variations among phones of a given model as well as between models. The sensor is the entire phone, not just the micro-machined transducer inside. A series of 1-D and 3-D shaking table tests were performed at UC San Diego and UC Berkeley, respectively, to evaluate the performance of a class of cell phones. In these tests, seven iPhones and iPod Touch devices that were mounted at different orientations were subjected to 124 earthquake ground motions to characterize their response and reliability as seismic sensors. The testing also provided insight into the seismic response of unsecured and falling instruments. The cell phones measured seismic parameters such as peak ground acceleration (PGA), peak ground velocity (PGV), peak ground displacement (PGD), and 5% damped spectral accelerations well. In general, iPhone and iPod Touch sensors slightly over-estimated ground motion energy (i.e., Arias Intensity, Ia). However, the mean acceleration response spectrum of the seven iPhones compared remarkably well with that of the reference high quality accelerometers. The error in the recorded intensity parameters was dependent on the characteristics of the input ground motion, particularly its PGA and Ia, and increased for stronger motions. The use of a high-friction device cover (e.g., rubber iPhone covers) on unsecured phones yielded substantially improved data by minimizing independent phone movement. Useful information on the ground motion characteristics was even extracted from unsecured phones during intense shaking events. The insight gained from these experiments is valuable in distilling information from a large number of imperfect signals from phones that may not be rigidly connected to the ground. With these ubiquitous measurement devices, a more accurate and rapid portrayal of the damage distribution during an earthquake can be provided to emergency responders and to the public.

A comparison of observed and predicted ground motions from the 2015 MW7.8 Gorkha, Nepal, earthquake

USGS Publications Warehouse

Hough, Susan E.; Martin, Stacey S.; Gahalaut, V.; Joshi, A.; Landes, M.; Bossu, R.

2016-01-01

We use 21 strong motion recordings from Nepal and India for the 25 April 2015 moment magnitude (MW) 7.8 Gorkha, Nepal, earthquake together with the extensive macroseismic intensity data set presented by Martin et al. (Seism Res Lett 87:957–962, 2015) to analyse the distribution of ground motions at near-field and regional distances. We show that the data are consistent with the instrumental peak ground acceleration (PGA) versus macroseismic intensity relationship developed by Worden et al. (Bull Seism Soc Am 102:204–221, 2012), and use this relationship to estimate peak ground acceleration from intensities (PGAEMS). For nearest-fault distances (RRUP < 200 km), PGAEMS is consistent with the Atkinson and Boore (Bull Seism Soc Am 93:1703–1729, 2003) subduction zone ground motion prediction equation (GMPE). At greater distances (RRUP > 200 km), instrumental PGA values are consistent with this GMPE, while PGAEMS is systematically higher. We suggest the latter reflects a duration effect whereby effects of weak shaking are enhanced by long-duration and/or long-period ground motions from a large event at regional distances. We use PGAEMS values within 200 km to investigate the variability of high-frequency ground motions using the Atkinson and Boore (Bull Seism Soc Am 93:1703–1729, 2003) GMPE as a baseline. Across the near-field region, PGAEMS is higher by a factor of 2.0–2.5 towards the northern, down-dip edge of the rupture compared to the near-field region nearer to the southern, up-dip edge of the rupture. Inferred deamplification in the deepest part of the Kathmandu valley supports the conclusion that former lake-bed sediments experienced a pervasive nonlinear response during the mainshock (Dixit et al. in Seismol Res Lett 86(6):1533–1539, 2015; Rajaure et al. in Tectonophysics, 2016. Ground motions were significantly amplified in the southern Gangetic basin, but were relatively low in the northern basin. The overall distribution of ground motions and damage during the Gorkha earthquake thus reflects a combination of complex source, path, and site effects. We also present a macroseismic intensity data set and analysis of ground motions for the MW7.3 Dolakha aftershock on 12 May 2015, which we compare to the Gorkha mainshock and conclude was likely a high stress-drop event.

St. Louis area earthquake hazards mapping project; seismic and liquefaction hazard maps

USGS Publications Warehouse

Cramer, Chris H.; Bauer, Robert A.; Chung, Jae-won; Rogers, David; Pierce, Larry; Voigt, Vicki; Mitchell, Brad; Gaunt, David; Williams, Robert; Hoffman, David; Hempen, Gregory L.; Steckel, Phyllis; Boyd, Oliver; Watkins, Connor M.; Tucker, Kathleen; McCallister, Natasha

2016-01-01

We present probabilistic and deterministic seismic and liquefaction hazard maps for the densely populated St. Louis metropolitan area that account for the expected effects of surficial geology on earthquake ground shaking. Hazard calculations were based on a map grid of 0.005°, or about every 500 m, and are thus higher in resolution than any earlier studies. To estimate ground motions at the surface of the model (e.g., site amplification), we used a new detailed near‐surface shear‐wave velocity model in a 1D equivalent‐linear response analysis. When compared with the 2014 U.S. Geological Survey (USGS) National Seismic Hazard Model, which uses a uniform firm‐rock‐site condition, the new probabilistic seismic‐hazard estimates document much more variability. Hazard levels for upland sites (consisting of bedrock and weathered bedrock overlain by loess‐covered till and drift deposits), show up to twice the ground‐motion values for peak ground acceleration (PGA), and similar ground‐motion values for 1.0 s spectral acceleration (SA). Probabilistic ground‐motion levels for lowland alluvial floodplain sites (generally the 20–40‐m‐thick modern Mississippi and Missouri River floodplain deposits overlying bedrock) exhibit up to twice the ground‐motion levels for PGA, and up to three times the ground‐motion levels for 1.0 s SA. Liquefaction probability curves were developed from available standard penetration test data assuming typical lowland and upland water table levels. A simplified liquefaction hazard map was created from the 5%‐in‐50‐year probabilistic ground‐shaking model. The liquefaction hazard ranges from low (60% of area expected to liquefy) in the lowlands. Because many transportation routes, power and gas transmission lines, and population centers exist in or on the highly susceptible lowland alluvium, these areas in the St. Louis region are at significant potential risk from seismically induced liquefaction and associated ground deformation

Imprint of Rupture Directivity From Ground Motions of the 24 August 2016 Mw6.2 Central Italy Earthquake

NASA Astrophysics Data System (ADS)

Ren, Yefei; Wang, Hongwei; Wen, Ruizhi

2017-12-01

An Mw6.2 earthquake occurred in Central Italy on 24 August 2016. The objective of this study was to reveal the imprint of rupture directivity using the strong motion recordings. The strong motion stations were separated into two groups: southeast (SE) and northwest (NW). The effects of rupture directivity on the peak ground acceleration (PGA), peak ground velocity (PGV), and pseudo spectral acceleration (PSA) were investigated. The observed values of these parameters were compared with predicted values derived from ground motion prediction equations. The results showed that the residuals between the observed and predicted PGAs, PGVs, and PSAs at periods of T < 1 s were correlated significantly with azimuth angle and generally larger in the NW sector, reflecting that the observed PGAs, PGVs, and short-period PSAs in the NW sector were generally larger than observed in the SE sector. These phenomena are accordant with the theoretical law that the rupture directivity causes higher amplitudes in the forward direction compared with the backward direction. Finally, selected source rupture parameters were inverted using PGAs and PGVs. This revealed that the rupture was predominantly unilateral rupture, the major rupture was likely at an azimuth of 360°, and the length of the major rupture was proportional to 70%-100% of the total ruptured fault, confirming that rupture directivity caused the differences in the ground motions observed in the SE and NW sectors.

Physiological and perceptual responses to incremental exercise testing in healthy men: effect of exercise test modality.

PubMed

Muscat, Kristina M; Kotrach, Houssam G; Wilkinson-Maitland, Courtney A; Schaeffer, Michele R; Mendonca, Cassandra T; Jensen, Dennis

2015-11-01

In a randomized cross-over study of 15 healthy men aged 20-30 years, we compared physiological and perceptual responses during treadmill and cycle exercise test protocols matched for increments in work rate - the source of increased locomotor muscle metabolic and contractile demands. The rates of O2 consumption and CO2 production were higher at the peak of treadmill versus cycle testing (p ≤ 0.05). Nevertheless, work rate, minute ventilation, tidal volume (VT), breathing frequency (fR), inspiratory capacity (IC), inspiratory reserve volume (IRV), tidal esophageal (Pes,tidal) and transdiaphragmatic pressure swings (Pdi,tidal), peak expiratory gastric pressures (Pga,peak), the root mean square of the diaphragm electromyogram (EMGdi,rms) expressed as a percentage of maximum EMGdi,rms (EMGdi,rms%max), and dyspnea ratings were similar at the peak of treadmill versus cycle testing (p > 0.05). Ratings of leg discomfort were higher at the peak of cycle versus treadmill exercise (p ≤ 0.05), even though peak O2 consumption was lower during cycling. Oxygen consumption, CO2 production, minute ventilation, fR, Pes,tidal, Pdi,tidal and Pga,peak were higher (p ≤ 0.05), while VT, IC, IRV, EMGdi,rms%max, and ratings of dyspnea and leg discomfort were similar (p > 0.05) at all or most submaximal work rates during treadmill versus cycle exercise. Our findings highlight important differences (and similarities) in physiological and perceptual responses at maximal and submaximal work rates during incremental treadmill and cycle exercise testing protocols. The lack of effect of exercise test modality on peak work rate advocates for the use of this readily available parameter to optimize training intensity determination, regardless of exercise training mode.

Atypical soil behavior during the 2011 Tohoku earthquake ( Mw = 9)

NASA Astrophysics Data System (ADS)

Pavlenko, Olga V.

2016-07-01

To understand physical mechanisms of generation of abnormally high peak ground acceleration (PGA; >1 g) during the Tohoku earthquake, models of nonlinear soil behavior in the strong motion were constructed for 27 KiK-net stations located in the near-fault zones to the south of FKSH17. The method of data processing used was developed by Pavlenko and Irikura, Pure Appl Geophys 160:2365-2379, 2003 and previously applied for studying soil behavior at vertical array sites during the 1995 Kobe (Mw = 6.8) and 2000 Tottori (Mw = 6.7) earthquakes. During the Tohoku earthquake, we did not observe a widespread nonlinearity of soft soils and reduction at the beginning of strong motion and recovery at the end of strong motion of shear moduli in soil layers, as usually observed during strong earthquakes. Manifestations of soil nonlinearity and reduction of shear moduli during strong motion were observed at sites located close to the source, in coastal areas. At remote sites, where abnormally high PGAs were recorded, shear moduli in soil layers increased and reached their maxima at the moments of the highest intensity of the strong motion, indicating soil hardening. Then, shear moduli reduced with decreasing the intensity of the strong motion. At soft-soil sites, the reduction of shear moduli was accompanied by a step-like decrease of the predominant frequencies of motion. Evidently, the observed soil hardening at the moments of the highest intensity of the strong motion contributed to the occurrence of abnormally high PGA, recorded during the Tohoku earthquake.

Seismic hazard map of North and Central America and the Caribbean

USGS Publications Warehouse

Shedlock, K.M.

1999-01-01

Minimization of the loss of life, property damage, and social and economic disruption due to earthquakes depends on reliable estimates of seismic hazard. National, state, and local government, decision makers, engineers, planners, emergency response organizations, builders, universities, and the general public require seismic hazard estimates for land use planning, improved building design and construction (including adoption of building construction codes), emergency response preparedness plans, economic forecasts, housing and employment decisions, and many more types of risk mitigation. The seismic hazard map of North and Central America and the Caribbean is the concatenation of various national and regional maps, involving a suite of approaches. The combined maps and documentation provide a useful regional seismic hazard framework and serve as a resource for any national or regional agency for further detailed studies applicable to their needs. This seismic hazard map depicts Peak Ground Acceleration (PGA) with a 10% chance of exceedance in 50 years. PGA, a short-period ground motion parameter that is proportional to force, is the most commonly mapped ground motion parameter because current building codes that include seismic provisions specify the horizontal force a building should be able to withstand during an earthquake. This seismic hazard map of North and Central America and the Caribbean depicts the likely level of short-period ground motion from earthquakes in a fifty-year window. Short-period ground motions effect short-period structures (e.g., one-to-two story buildings). The highest seismic hazard values in the region generally occur in areas that have been, or are likely to be, the sites of the largest plate boundary earthquakes.

Source Rupture Process for the February 21, 2011, Mw6.1, New Zealand Earthquake and the Characteristics of Near-field Strong Ground Motion

NASA Astrophysics Data System (ADS)

Meng, L.; Shi, B.

2011-12-01

The New Zealand Earthquake of February 21, 2011, Mw 6.1 occurred in the South Island, New Zealand with the epicenter at longitude 172.70°E and latitude 43.58°S, and with depth of 5 km. The Mw 6.1 earthquake occurred on an unknown blind fault involving oblique-thrust faulting, which is 9 km away from southern of the Christchurch, the third largest city of New Zealand, with a striking direction from east toward west (United State Geology Survey, USGS, 2011). The earthquake killed at least 163 people and caused a lot of construction damages in Christchurch city. The Peak Ground Acceleration (PGA) observed at station Heathcote Valley Primary School (HVSC), which is 1 km away from the epicenter, is up to almost 2.0g. The ground-motion observation suggests that the buried earthquake source generates much higher near-fault ground motion. In this study, we have analyzed the earthquake source spectral parameters based on the strong motion observations, and estimated the near-fault ground motion based on the Brune's circular fault model. The results indicate that the larger ground motion may be caused by a higher dynamic stress drop,Δσd , or effect stress drop named by Brune, in the major source rupture region. In addition, a dynamical composite source model (DCSM) has been developed to simulate the near-fault strong ground motion with associated fault rupture properties from the kinematic point of view. For comparison purpose, we also conducted the broadband ground motion predictions for the station of HVSC; the synthetic seismogram of time histories produced for this station has good agreement with the observations in the waveforms, peak values and frequency contents, which clearly indicate that the higher dynamic stress drop during the fault rupture may play an important role to the anomalous ground-motion amplification. The preliminary simulated result illustrated in at Station HVSC is that the synthetics seismograms have a realistic appearance in the waveform and time duration to the observations, especially for the vertical component. Synthetics Fourier spectra are reasonably similar to the recordings. The simulated PGA values of vertical and S26W components are consistent with the recorded, and for the S64E component, the PGA derived from our simulation is smaller than that from observation. The resultant Fourier spectra both for the synthetic and observation is much similar with each other for three components of acceleration time histories, except for the vertical component, where the derived spectra from synthetic data is smaller than that resultant from observation when the frequency is above 10 Hz. Both theoretical study and numerical simulation indicate that, for the 2011 Mw 6.1, New Zealand Earthquake, the higher dynamic stress drop during the source rupture process could play an important role to the anomalous ground-motion amplification beside to the other site-related seismic effects. The composite source modeling based on the simple Brune's pulse model could approximately provide us a good insight into earthquake source related rupture processes for a moderate-sized earthquake.

Seismic performance evaluation of RC frame-shear wall structures using nonlinear analysis methods

NASA Astrophysics Data System (ADS)

Shi, Jialiang; Wang, Qiuwei

To further understand the seismic performance of reinforced concrete (RC) frame-shear wall structures, a 1/8 model structure is scaled from a main factory structure with seven stories and seven bays. The model with four-stories and two-bays was pseudo-dynamically tested under six earthquake actions whose peak ground accelerations (PGA) vary from 50gal to 400gal. The damage process and failure patterns were investigated. Furthermore, nonlinear dynamic analysis (NDA) and capacity spectrum method (CSM) were adopted to evaluate the seismic behavior of the model structure. The top displacement curve, story drift curve and distribution of hinges were obtained and discussed. It is shown that the model structure had the characteristics of beam-hinge failure mechanism. The two methods can be used to evaluate the seismic behavior of RC frame-shear wall structures well. What’s more, the NDA can be somewhat replaced by CSM for the seismic performance evaluation of RC structures.

Atypical soil hardening during the Tohoku earthquake of March 11, 2011 ( M w = 9.0)

NASA Astrophysics Data System (ADS)

Pavlenko, O. V.

2017-10-01

Based on the records of KiK-net vertical arrays, models of soil behavior down to depths of 100-200 m in the near-fault zones during the Tohoku earthquake are examined. In contrast to the regular pattern observed during strong earthquakes, soft soils have not broadly demonstrated nonlinear behavior, or a reduction (with the onset of strong motions) and recovery (after strong motions finished) of the shear modulus in soil layers. At the stations where anomalously high peak ground accelerations were recorded (PGA > 1g), the values of the shear modulus in soil layers increased with the onset of strong motions and reached a maximum when motions were the most intensive, which indicated hardening of soils. Soil behavior was close to linear, here. The values of the shear moduli decrease along with a decrease in intensity of strong ground motions, and at soft soil stations, this was accompanied by a stepwise decrease in the frequency of motion.

Seismic hazard evaluation of the Oman India pipeline

DOE Office of Scientific and Technical Information (OSTI.GOV)

Campbell, K.W.; Thenhaus, P.C.; Mullee, J.E.

1996-12-31

The proposed Oman India pipeline will traverse approximately 1,135 km of the northern Arabian Sea floor and adjacent continental shelves at depths of over 3 km on its route from Ra`s al Jifan, Oman, to Rapar Gadhwali, India. The western part of the route crosses active faults that form the transform boundary between the Arabian and Indian tectonic plates. The eastern terminus of the route lies in the vicinity of the great (M {approximately} 8) 1829 Kutch, India earthquake. A probabilistic seismic hazard analysis was used to estimate the values of peak ground acceleration (PGA) with return periods of 200,more » 500 and 1,000 years at selected locations along the pipeline route and the submarine Indus Canyon -- a possible source of large turbidity flows. The results defined the ground-shaking hazard along the pipeline route and Indus Canyon for evaluation of risks to the pipeline from potential earthquake-induced geologic hazards such as liquefaction, slope instability, and turbidity flows. 44 refs.« less

Ground Motion Prediction Model Using Adaptive Neuro-Fuzzy Inference Systems: An Example Based on the NGA-West 2 Data

NASA Astrophysics Data System (ADS)

Ameur, Mourad; Derras, Boumédiène; Zendagui, Djawed

2018-03-01

Adaptive neuro-fuzzy inference systems (ANFIS) are used here to obtain the robust ground motion prediction model (GMPM). Avoiding a priori functional form, ANFIS provides fully data-driven predictive models. A large subset of the NGA-West2 database is used, including 2335 records from 580 sites and 137 earthquakes. Only shallow earthquakes and recordings corresponding to stations with measured V s30 properties are selected. Three basics input parameters are chosen: the moment magnitude ( Mw), the Joyner-Boore distance ( R JB) and V s30. ANFIS model output is the peak ground acceleration (PGA), peak ground velocity (PGV) and 5% damped pseudo-spectral acceleration (PSA) at periods from 0.01 to 4 s. A procedure similar to the random-effects approach is developed to provide between- and within-event standard deviations. The total standard deviation (SD) varies between [0.303 and 0.360] (log10 units) depending on the period. The ground motion predictions resulting from such simple three explanatory variables ANFIS models are shown to be comparable to the most recent NGA results (e.g., Boore et al., in Earthquake Spectra 30:1057-1085, 2014; Derras et al., in Earthquake Spectra 32:2027-2056, 2016). The main advantage of ANFIS compared to artificial neuronal network (ANN) is its simple and one-off topology: five layers. Our results exhibit a number of physically sound features: magnitude scaling of the distance dependency, near-fault saturation distance increasing with magnitude and amplification on soft soils. The ability to implement ANFIS model using an analytic equation and Excel is demonstrated.

Ground Motion Prediction Model Using Adaptive Neuro-Fuzzy Inference Systems: An Example Based on the NGA-West 2 Data

NASA Astrophysics Data System (ADS)

Ameur, Mourad; Derras, Boumédiène; Zendagui, Djawed

2017-12-01

Adaptive neuro-fuzzy inference systems (ANFIS) are used here to obtain the robust ground motion prediction model (GMPM). Avoiding a priori functional form, ANFIS provides fully data-driven predictive models. A large subset of the NGA-West2 database is used, including 2335 records from 580 sites and 137 earthquakes. Only shallow earthquakes and recordings corresponding to stations with measured V s30 properties are selected. Three basics input parameters are chosen: the moment magnitude (Mw), the Joyner-Boore distance (R JB) and V s30. ANFIS model output is the peak ground acceleration (PGA), peak ground velocity (PGV) and 5% damped pseudo-spectral acceleration (PSA) at periods from 0.01 to 4 s. A procedure similar to the random-effects approach is developed to provide between- and within-event standard deviations. The total standard deviation (SD) varies between [0.303 and 0.360] (log10 units) depending on the period. The ground motion predictions resulting from such simple three explanatory variables ANFIS models are shown to be comparable to the most recent NGA results (e.g., Boore et al., in Earthquake Spectra 30:1057-1085, 2014; Derras et al., in Earthquake Spectra 32:2027-2056, 2016). The main advantage of ANFIS compared to artificial neuronal network (ANN) is its simple and one-off topology: five layers. Our results exhibit a number of physically sound features: magnitude scaling of the distance dependency, near-fault saturation distance increasing with magnitude and amplification on soft soils. The ability to implement ANFIS model using an analytic equation and Excel is demonstrated.

A Study on the Relationship between Disaster and Spectral Intensity

NASA Astrophysics Data System (ADS)

Yeh, Yeong-Tein; Kao, Ching-Yun

2010-05-01

Nowadays, the structural environment is becoming so complicated that an index, which can better assess earthquake damage than the originally defined intensity scale and PGA, is needed. Housner [1] suggested that spectral intensity (SI) can be a risk index of an earthquake. After Housner some earthquake engineers keep on exploring different period range of SI and its application [2-5]. The study of Matsumura [4] shows that SI is a better measure of earthquake intensity for a wide range of frequencies with a good correlation with damage than peak ground acceleration (adequate to structures with shorter natural period) and peak ground velocity (adequate to structures with longer natural period). Recently, Jean [6] investigated earthquake intensity attenuation law and site effect of strong ground motion using earthquake records in Taiwan area. Their results show that SI is a better earthquake damage index than PGA. This study enhanced the SI concept proposed by Jean [6]. The spectral intensity was separated into three periods, short period (acceleration controlled period), medium period (velocity controlled period), and long period (displacement controlled period). The average spectral intensity of short period, medium period, and long period can be an earthquake damage index of low-rise buildings, buildings of medium height, and high-rise buildings. Since average value of a certain data is meaningful when the data has a small variance, the start and end points of the three periods are calculated by statistical method so that the data at each period has minimum variance. Finally, the relationship between disaster and spectral intensity of 1999 Taiwan Chi-Chi earthquake was investigated in this study. [1] Housner, G. W. (1952). "Spectrum intensity of strong-motion earthquakes," in Proc. Sym. Earthq. Blast Eeff. on Stru., EERI, U.C.L.A.. [2] Hidalgo.P. and R. W.Clough (1974). "Earthquake simulator study of a reinforced concrete frame," Report UCB/EERC-74/13, EERC, University of California, Berkeley. [3] Kappos, A. J (1991). "Analytical prediction of the collpase earthquake for R. C. buildings: suggested methodology," Earthq. Eng. Stru. Dyn., 20, 2, pp. 167-176. [4] Matsumura, K. (1992). "On the intensity measure of strong motions related to structural failures," in Proceeding of 10 WCEE, 1, pp. 375-380. [5] Martinez-Rueda, J. E (1998). "Scaling procedure for natural accelerograms based on a system of spectrum intensity scales," Earthq. Spec., 14, 1,. [6] Jean, W. Y., Y. W. Chang, K. L. Wen, and C. H. Loh (2006). "Early estimation of seismic hazard for strong earthquakes in Taiwan," Natural Hazards, vol. 37, pp. 39-53.

Reducing process delays for real-time earthquake parameter estimation - An application of KD tree to large databases for Earthquake Early Warning

NASA Astrophysics Data System (ADS)

Yin, Lucy; Andrews, Jennifer; Heaton, Thomas

2018-05-01

Earthquake parameter estimations using nearest neighbor searching among a large database of observations can lead to reliable prediction results. However, in the real-time application of Earthquake Early Warning (EEW) systems, the accurate prediction using a large database is penalized by a significant delay in the processing time. We propose to use a multidimensional binary search tree (KD tree) data structure to organize large seismic databases to reduce the processing time in nearest neighbor search for predictions. We evaluated the performance of KD tree on the Gutenberg Algorithm, a database-searching algorithm for EEW. We constructed an offline test to predict peak ground motions using a database with feature sets of waveform filter-bank characteristics, and compare the results with the observed seismic parameters. We concluded that large database provides more accurate predictions of the ground motion information, such as peak ground acceleration, velocity, and displacement (PGA, PGV, PGD), than source parameters, such as hypocenter distance. Application of the KD tree search to organize the database reduced the average searching process by 85% time cost of the exhaustive method, allowing the method to be feasible for real-time implementation. The algorithm is straightforward and the results will reduce the overall time of warning delivery for EEW.

Dynamic modeling of injection-induced fault reactivation and ground motion and impact on surface structures and human perception

DOE PAGES

Rutqvist, Jonny; Cappa, Frederic; Rinaldi, Antonio P.; ...

2014-12-31

We summarize recent modeling studies of injection-induced fault reactivation, seismicity, and its potential impact on surface structures and nuisance to the local human population. We used coupled multiphase fluid flow and geomechanical numerical modeling, dynamic wave propagation modeling, seismology theories, and empirical vibration criteria from mining and construction industries. We first simulated injection-induced fault reactivation, including dynamic fault slip, seismic source, wave propagation, and ground vibrations. From co-seismic average shear displacement and rupture area, we determined the moment magnitude to about M w = 3 for an injection-induced fault reactivation at a depth of about 1000 m. We then analyzedmore » the ground vibration results in terms of peak ground acceleration (PGA), peak ground velocity (PGV), and frequency content, with comparison to the U.S. Bureau of Mines’ vibration criteria for cosmetic damage to buildings, as well as human-perception vibration limits. For the considered synthetic M w = 3 event, our analysis showed that the short duration, high frequency ground motion may not cause any significant damage to surface structures, and would not cause, in this particular case, upward CO 2 leakage, but would certainly be felt by the local population.« less

Estimation of Static Coulomb Stress Change and Strong Motion Simulation for Jiuzhaigou 7.0 Earthquake Base on SENTINEL-1 Insar Data Inversion

NASA Astrophysics Data System (ADS)

Shen, W. H.; Luo, Y.; Jiao, Q. S.

2018-04-01

On August 8, 2017, an earthquake of M 7.0 occurred at Jiuzhaigou. Based on the Sentinel-1 satellite InSAR data, we obtained coseismic deformation field and inverted the source slip model. Results show that this event is dominated by strike slip, and the total released seismic moment is 8.06 × 1018 Nm, equivalent to an earthquake of Mw 6.57. We calculated static stress changes along strike and dip direction, and the static stress analysis show that the average stress drop are at low level, which may be responsible for the low level of ground motion during Jiuzhaigou earthquake. The coseismic Coulomb stress changes are calculated base on the inverted slip model, which revealed that 82.59 % of aftershocks are located in the Coulomb stress increasing area, 78.42 % of total aftershocks may be triggered by the mainshock aftershock, indicating that the mainshock has a significant triggering effect on the subsequent aftershocks. Based on stochastic finite fault model, we simulated regional peak ground acceleration (PGA), peak ground velocity (PGV) and the intensity, and results could capture basic features associated with the ground motion patterns. Moreover, the simulated results reflect the obvious rupture directivity effect.

Influence of Upper-Body Exercise on the Fatigability of Human Respiratory Muscles

PubMed Central

TILLER, NICHOLAS B.; CAMPBELL, IAN G.; ROMER, LEE M.

2017-01-01

ABSTRACT Purpose Diaphragm and abdominal muscles are susceptible to contractile fatigue in response to high-intensity, whole-body exercise. This study assessed whether the ventilatory and mechanical loads imposed by high-intensity, upper-body exercise would be sufficient to elicit respiratory muscle fatigue. Methods Seven healthy men (mean ± SD; age = 24 ± 4 yr, peak O2 uptake [V˙O2peak] = 31.9 ± 5.3 mL·kg−1·min−1) performed asynchronous arm-crank exercise to exhaustion at work rates equivalent to 30% (heavy) and 60% (severe) of the difference between gas exchange threshold and V˙O2peak. Contractile fatigue of the diaphragm and abdominal muscles was assessed by measuring pre- to postexercise changes in potentiated transdiaphragmatic and gastric twitch pressures (Pdi,tw and Pga,tw) evoked by supramaximal magnetic stimulation of the cervical and thoracic nerves, respectively. Results Exercise time was 24.5 ± 5.8 min for heavy exercise and 9.8 ± 1.8 min for severe exercise. Ventilation over the final minute of heavy exercise was 73 ± 20 L·min−1 (39% ± 11% maximum voluntary ventilation) and 99 ± 19 L·min−1 (53% ± 11% maximum voluntary ventilation) for severe exercise. Mean Pdi,tw did not differ pre- to postexercise at either intensity (P > 0.05). Immediately (5–15 min) after severe exercise, mean Pga,tw was significantly lower than pre-exercise values (41 ± 13 vs 53 ± 15 cm H2O, P < 0.05), with the difference no longer significant after 25–35 min. Abdominal muscle fatigue (defined as ≥15% reduction in Pga,tw) occurred in 1/7 subjects after heavy exercise and 5/7 subjects after severe exercise. Conclusions High-intensity, upper-body exercise elicits significant abdominal, but not diaphragm, muscle fatigue in healthy men. The increased magnitude and prevalence of fatigue during severe-intensity exercise is likely due to additional (nonrespiratory) loading of the thorax. PMID:28288012

Influence of Upper-Body Exercise on the Fatigability of Human Respiratory Muscles.

PubMed

Tiller, Nicholas B; Campbell, Ian G; Romer, Lee M

2017-07-01

Diaphragm and abdominal muscles are susceptible to contractile fatigue in response to high-intensity, whole-body exercise. This study assessed whether the ventilatory and mechanical loads imposed by high-intensity, upper-body exercise would be sufficient to elicit respiratory muscle fatigue. Seven healthy men (mean ± SD; age = 24 ± 4 yr, peak O2 uptake [V˙O2peak] = 31.9 ± 5.3 mL·kg·min) performed asynchronous arm-crank exercise to exhaustion at work rates equivalent to 30% (heavy) and 60% (severe) of the difference between gas exchange threshold and V˙O2peak. Contractile fatigue of the diaphragm and abdominal muscles was assessed by measuring pre- to postexercise changes in potentiated transdiaphragmatic and gastric twitch pressures (Pdi,tw and Pga,tw) evoked by supramaximal magnetic stimulation of the cervical and thoracic nerves, respectively. Exercise time was 24.5 ± 5.8 min for heavy exercise and 9.8 ± 1.8 min for severe exercise. Ventilation over the final minute of heavy exercise was 73 ± 20 L·min (39% ± 11% maximum voluntary ventilation) and 99 ± 19 L·min (53% ± 11% maximum voluntary ventilation) for severe exercise. Mean Pdi,tw did not differ pre- to postexercise at either intensity (P > 0.05). Immediately (5-15 min) after severe exercise, mean Pga,tw was significantly lower than pre-exercise values (41 ± 13 vs 53 ± 15 cm H2O, P < 0.05), with the difference no longer significant after 25-35 min. Abdominal muscle fatigue (defined as ≥15% reduction in Pga,tw) occurred in 1/7 subjects after heavy exercise and 5/7 subjects after severe exercise. High-intensity, upper-body exercise elicits significant abdominal, but not diaphragm, muscle fatigue in healthy men. The increased magnitude and prevalence of fatigue during severe-intensity exercise is likely due to additional (nonrespiratory) loading of the thorax.

The persistence of directivity in small earthquakes

USGS Publications Warehouse

Boatwright, J.

2007-01-01

We derive a simple inversion of peak ground acceleration (PGA) or peak ground velocity (PGV) for rupture direction and rupture velocity and then test this inversion on the peak motions obtained from seven 3.5 ??? M ??? 4.1 earthquakes that occurred in two clusters in November 2002 and February 2003 near San Ramon, California. These clusters were located on two orthogonal strike-slip faults so that the events share the same approximate focal mechanism but not the same fault plane. Three earthquakes exhibit strong directivity, but the other four earthquakes exhibit relatively weak directivity. We use the residual PGAs and PGVs from the other six events to determine station corrections for each earthquake. The inferred rupture directions unambiguously identify the fault plane for the three earthquakes with strong directivity and for three of the four earthquakes with weak directivity. The events with strong directivity have fast rupture velocities (0.63????? v ??? 0.87??); the events with weak directivity either rupture more slowly (0.17????? v ???0.35??) or bilaterally. The simple unilateral inversion cannot distinguish between slow and bilateral ruptures: adding a bilateral rupture component degrades the fit of the rupture directions to the fault planes. By comparing PGAs from the events with strong and weak directivity, we show how an up-dip rupture in small events can distort the attenuation of peak ground motion with distance. When we compare the rupture directions of the earthquakes to the location of aftershocks in the two clusters, we find than almost all the aftershocks of the three earthquakes with strong directivity occur within 70?? of the direction of rupture.

A Bayesian and Physics-Based Ground Motion Parameters Map Generation System

NASA Astrophysics Data System (ADS)

Ramirez-Guzman, L.; Quiroz, A.; Sandoval, H.; Perez-Yanez, C.; Ruiz, A. L.; Delgado, R.; Macias, M. A.; Alcántara, L.

2014-12-01

We present the Ground Motion Parameters Map Generation (GMPMG) system developed by the Institute of Engineering at the National Autonomous University of Mexico (UNAM). The system delivers estimates of information associated with the social impact of earthquakes, engineering ground motion parameters (gmp), and macroseismic intensity maps. The gmp calculated are peak ground acceleration and velocity (pga and pgv) and response spectral acceleration (SA). The GMPMG relies on real-time data received from strong ground motion stations belonging to UNAM's networks throughout Mexico. Data are gathered via satellite and internet service providers, and managed with the data acquisition software Earthworm. The system is self-contained and can perform all calculations required for estimating gmp and intensity maps due to earthquakes, automatically or manually. An initial data processing, by baseline correcting and removing records containing glitches or low signal-to-noise ratio, is performed. The system then assigns a hypocentral location using first arrivals and a simplified 3D model, followed by a moment tensor inversion, which is performed using a pre-calculated Receiver Green's Tensors (RGT) database for a realistic 3D model of Mexico. A backup system to compute epicentral location and magnitude is in place. A Bayesian Kriging is employed to combine recorded values with grids of computed gmp. The latter are obtained by using appropriate ground motion prediction equations (for pgv, pga and SA with T=0.3, 0.5, 1 and 1.5 s ) and numerical simulations performed in real time, using the aforementioned RGT database (for SA with T=2, 2.5 and 3 s). Estimated intensity maps are then computed using SA(T=2S) to Modified Mercalli Intensity correlations derived for central Mexico. The maps are made available to the institutions in charge of the disaster prevention systems. In order to analyze the accuracy of the maps, we compare them against observations not considered in the computations, and present some examples of recent earthquakes. We conclude that the system provides information with a fair goodness-of-fit against observations. This project is partially supported by DGAPA-PAPIIT (UNAM) project TB100313-RR170313.

Microbial production and chemical transformation of poly-γ-glutamate.

PubMed

Ashiuchi, Makoto

2013-11-01

Poly-γ-glutamate (PGA), a novel polyamide material with industrial applications, possesses a nylon-like backbone, is structurally similar to polyacrylic acid, is biodegradable and is safe for human consumption. PGA is frequently found in the mucilage of natto, a Japanese traditional fermented food. To date, three different types of PGA, namely a homo polymer of D-glutamate (D-PGA), a homo polymer of L-glutamate (L-PGA), and a random copolymer consisting of D- and L-glutamate (DL-PGA), are known. This review will detail the occurrence and physiology of PGA. The proposed reaction mechanism of PGA synthesis including its localization and the structure of the involved enzyme, PGA synthetase, are described. The occurrence of multiple carboxyl residues in PGA likely plays a role in its relative unsuitability for the development of bio-nylon plastics and thus, establishment of an efficient PGA-reforming strategy is of great importance. Aside from the potential applications of PGA proposed to date, a new technique for chemical transformation of PGA is also discussed. Finally, some techniques for PGA and its derivatives in advanced material technology are presented. © 2013 The Author. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology.

[Use of antagonistic Bacillus subtilis bacteria for treatment of nosocomial urinary tract infections].

PubMed

Pushkarev, A M; Tuĭgunova, V G; Zaĭnullin, R R; Kuznetsova, T N; Gabidullin, Iu Z

2007-01-01

Effect of Bactisporin--a probiotic, containing spores of aerobic Bacillus subtilis 3H bacterium--for complex treatment of patients with nosocomial urinary tract infections was studied. 68 Cultures of different species of conditionally pathogenic bacteria were isolated from urine of the patients. Susceptibility of the isolated cultures to antibiotics before and after application of B. subtilis 3H metabolites was determined. The metabolites were accumulated on potato-glucose agar (PGA) while bacterium was cultivated on kapron membranes placed on surface of the medium. Influence of obtained metabolites on isolated strains was assessed by cultivation of each strain in metabolites-rich PGA during 24 h. Metabolites of B. subtilis led to decrease in resistance of isolated uropathogenic microflora to antibiotics. Use of Bactisporin in complex treatment of nosocomial urinary tract infections resulted in accelerated elimination of causative microorganism.

Urban seismic risk assessment: statistical repair cost data and probable structural losses based on damage scenario—correlation analysis

NASA Astrophysics Data System (ADS)

Eleftheriadou, Anastasia K.; Baltzopoulou, Aikaterini D.; Karabinis, Athanasios I.

2016-06-01

The current seismic risk assessment is based on two discrete approaches, actual and probable, validating afterwards the produced results. In the first part of this research, the seismic risk is evaluated from the available data regarding the mean statistical repair/strengthening or replacement cost for the total number of damaged structures (180,427 buildings) after the 7/9/1999 Parnitha (Athens) earthquake. The actual evaluated seismic risk is afterwards compared to the estimated probable structural losses, which is presented in the second part of the paper, based on a damage scenario in the referring earthquake. The applied damage scenario is based on recently developed damage probability matrices (DPMs) from Athens (Greece) damage database. The seismic risk estimation refers to 750,085 buildings situated in the extended urban region of Athens. The building exposure is categorized in five typical structural types and represents 18.80 % of the entire building stock in Greece. The last information is provided by the National Statistics Service of Greece (NSSG) according to the 2000-2001 census. The seismic input is characterized by the ratio, a g/ a o, where a g is the regional peak ground acceleration (PGA) which is evaluated from the earlier estimated research macroseismic intensities, and a o is the PGA according to the hazard map of the 2003 Greek Seismic Code. Finally, the collected investigated financial data derived from different National Services responsible for the post-earthquake crisis management concerning the repair/strengthening or replacement costs or other categories of costs for the rehabilitation of earthquake victims (construction and function of settlements for earthquake homeless, rent supports, demolitions, shorings) are used to determine the final total seismic risk factor.

Predicting Posttraumatic Stress Symptom Prevalence and Local Distribution after an Earthquake with Scarce Data.

PubMed

Dussaillant, Francisca; Apablaza, Mauricio

2017-08-01

After a major earthquake, the assignment of scarce mental health emergency personnel to different geographic areas is crucial to the effective management of the crisis. The scarce information that is available in the aftermath of a disaster may be valuable in helping predict where are the populations that are in most need. The objectives of this study were to derive algorithms to predict posttraumatic stress (PTS) symptom prevalence and local distribution after an earthquake and to test whether there are algorithms that require few input data and are still reasonably predictive. A rich database of PTS symptoms, informed after Chile's 2010 earthquake and tsunami, was used. Several model specifications for the mean and centiles of the distribution of PTS symptoms, together with posttraumatic stress disorder (PTSD) prevalence, were estimated via linear and quantile regressions. The models varied in the set of covariates included. Adjusted R2 for the most liberal specifications (in terms of numbers of covariates included) ranged from 0.62 to 0.74, depending on the outcome. When only including peak ground acceleration (PGA), poverty rate, and household damage in linear and quadratic form, predictive capacity was still good (adjusted R2 from 0.59 to 0.67 were obtained). Information about local poverty, household damage, and PGA can be used as an aid to predict PTS symptom prevalence and local distribution after an earthquake. This can be of help to improve the assignment of mental health personnel to the affected localities. Dussaillant F , Apablaza M . Predicting posttraumatic stress symptom prevalence and local distribution after an earthquake with scarce data. Prehosp Disaster Med. 2017;32(4):357-367.

Ground failure in the 2001 Mw 8.4 southern Peru earthquake

NASA Astrophysics Data System (ADS)

Rondinel-Oviedo, Efrain Alejandro

On June 23rd 2001 a moment magnitude (M W) 8.4, earthquake shook the southern portion of Peru. This rare large-magnitude event provided a unique opportunity to develop a suite of high quality case histories and also to test and calibrate existing geotechnical earthquake engineering analysis procedures and models against observations from the earthquake. The work presented in this thesis is focused on three topics pertaining to ground failure (i.e., the permanent deformation of the ground resulting from an earthquake) observed during the event: (1) surface ground damage in small basin geometries, (2) seismic compression, and (3) performance of a concrete faced rockfill dam (CFRD) dam. Surface ground strain damage patterns in small basin geometries has previously been typically studied at the large (i.e., geological) scale, but not at the scale of civil engineering infrastructure. During seismic events basin geometries containing soft material confined by stiffer material trap the seismic waves and generate surface waves that travel on the ground along the soft material. Numerical modeling shows that surface waves are generated at basin edges and travel on the ground creating higher duration, higher response (peak ground acceleration, PGA), higher energy (Arias Intensity) and higher angular distortion, especially in zones close to the edges. The impedance contrast between the stiff material and the soft material, and the dip angle play an important role in basin response. Seismic compression (i.e., the shaking induced densification of unsaturated soil) was observed in many highway embankments in the region of the earthquake. In many instances, this phenomenon was exasperated by soil-structure interaction with adjacent bridge or culvert structures. Numerical modeling conducted as part of this research showed (i) a significantly different response when the structure (culvert) is considered, (ii) impedance contrast plays a role in the system responses, and (iii) low horizontal stresses are observed when the peak of the shear strain occurs. It is believed that the effect of low confining stresses was responsible for the large amounts of settlement observed, and which was not directly captured by classical seismic compression models. The third topic of study considered evaluates the performance of a concrete faced rockfill dam (CFRD) dam in the earthquake. Analysis considered the effect of the time, PGA of rock, and change in amplification ratio with PGA. It appears that the natural frequency of the dam increases with time in the transversal direction and slightly decreases in the longitudinal direction. It is believed that the increase in the natural frequency might be associated with change in the dam stiffness (i.e. densification) with time. However, reason for the slight decrease in the longitudinal direction is not clear and requires further research.

Empirical relationships between instrumental ground motions and observed intensities for two great Chilean subduction zone earthquakes

NASA Astrophysics Data System (ADS)

Cilia, M. G.; Baker, L. M.

2015-12-01

We determine empirical relationships between instrumental peak ground motions and observed intensities for two great Chilean subduction earthquakes: the 2010 Mw8.8 Maule earthquake and the 2014 Mw8.2 Iquique earthquake. Both occurred immediately offshore on the primary plate boundary interface between the Nazca and South America plates. They are among the largest earthquakes to be instrumentally recorded; the 2010 Maule event is the second largest earthquake to produce strong motion recordings. Ground motion to intensity conversion equations (GMICEs) are used to reconstruct the distribution of shaking for historical earthquakes by using intensities estimated from contemporary accounts. Most great (M>8) earthquakes, like these, occur within subduction zones, yet few GMICEs exist for subduction earthquakes. It is unclear whether GMICEs developed for active crustal regions, such as California, can be scaled up to the large M of subduction zone events, or if new data sets must be analyzed to develop separate subduction GMICEs. To address this question, we pair instrumental peak ground motions, both acceleration (PGA) and velocity (PGV), with intensities derived from onsite surveys of earthquake damage made in the weeks after the events and internet-derived felt reports. We fit a linear predictive equation between the geometric mean of the maximum PGA or PGV of the two horizontal components and intensity, using linear least squares. We use a weighting scheme to express the uncertainty of the pairings based on a station's proximity to the nearest intensity observation. The intensity data derived from the onsite surveys is a complete, high-quality investigation of the earthquake damage. We perform the computations using both the survey data and community decimal intensities (CDI) calculated from felt reports volunteered by citizens (USGS "Did You Feel It", DYFI) and compare the results. We compare the GMICEs we developed to the most widely used GMICEs from California and central US earthquakes, and global earthquakes. Existing GMICEs consistently over-predict intensity for these two subduction events. This may be a regional difference, or a magnitude-dependent effect. Currently, however, there is not enough data from these great subduction earthquakes to prefer one interpretation over the other.

The influence of visual feedback from the recent past on the programming of grip aperture is grasp-specific, shared between hands, and mediated by sensorimotor memory not task set.

PubMed

Tang, Rixin; Whitwell, Robert L; Goodale, Melvyn A

2015-05-01

Goal-directed movements, such as reaching out to grasp an object, are necessarily constrained by the spatial properties of the target such as its size, shape, and position. For example, during a reach-to-grasp movement, the peak width of the aperture formed by the thumb and fingers in flight (peak grip aperture, PGA) is linearly related to the target's size. Suppressing vision throughout the movement (visual open loop) has a small though significant effect on this relationship. Visual open loop conditions also produce a large increase in the PGA compared to when vision is available throughout the movement (visual closed loop). Curiously, this differential effect of the availability of visual feedback is influenced by the presentation order: the difference in PGA between closed- and open-loop trials is smaller when these trials are intermixed (an effect we have called 'homogenization'). Thus, grasping movements are affected not only by the availability of visual feedback (closed loop or open loop) but also by what happened on the previous trial. It is not clear, however, whether this carry-over effect is mediated through motor (or sensorimotor) memory or through the interference of different task sets for closed-loop and open-loop feedback that determine when the movements are fully specified. We reasoned that sensorimotor memory, but not a task set for closed and open loop feedback, would be specific to the type of response. We tested this prediction in a condition in which pointing to targets was alternated with grasping those same targets. Critically, in this condition, when pointing was performed in open loop, grasping was always performed in closed loop (and vice versa). Despite the fact that closed- and open-loop trials were alternating in this condition, we found no evidence for homogenization of the PGA. Homogenization did occur, however, in a follow-up experiment in which grasping movements and visual feedback were alternated between the left and the right hand, indicating that sensorimotor (or motor) memory can operate both within and between hands when the response type is kept the same. In a final experiment, we ruled out the possibility that simply alternating the hand used to perform the grasp interferes with motor or sensorimotor memory. We did this by showing that when the hand was alternated within a block of exclusively closed- or open-loop trials, homogenization of the PGA did not occur. Taken together, the results suggest that (1) interference from simply switching between task sets for closed or open-loop feedback or from switching between the hands cannot account homogenization in the PGA and that (2) the programming and execution of grasps can borrow not only from grasping movements executed in the past by the same hand, but also from grasping movements executed with the other hand. Copyright © 2015 Elsevier B.V. All rights reserved.

[Coexistence of Addison-Biermer's anaemia with endocrine glands' dysfunctions].

PubMed

Kuliszkiewicz-Janus, Malgorzata; Bednarek-Tupikowska, Grazyna; Rózycka, Beata; Dereń, Izabela

2004-11-01

Addison-Biermer's anaemia is an autoimmune disease. It may coexist with other auto-aggressive diseases, precede them or join the other existing autoimmune diseases. It most often accompanies the Hashimoto disease but also may coexist polyglandular autoimmune syndrome (PGA). Three types of PGA are distinguished: PGA1--Blizzard's Syndrome, PGA2--Schmidt's Syndrome, and PGA3. The latter, unlike the remaining ones, is characterized by normal function of adrenal glands. Addison-Biermer's anaemia occurrence may be often difficult to diagnose as coexisting illnesses might ouflage its clinical symptoms. The aim of this paper was to analyse patients with different types of PGA with coexisting Addison-Biermer's anaemia. Group of 24 individuals was analysed: 2 women with PGA1, 10 patients with PGA2, 10 patients with PGA3. In 2 remaining ones PGA was not confirmed. Addison-Biermer's anaemia occurred in 7 patients (2 with PGA2 and 5 with PGA3 syndrome). Decreased concentration of vitamin B12 was diagnosed in 3 individuals among 24 examined patients (1 with type 3 and 2 with type 2), as well in 2 patients with unconfirmed PGA. Addison-Biermer's anaemia was not observed in patients with PGA1. We observed that megaloblastic anaemia occurred characteristic schedule depending on appearance of autoimmune diseases: in PGA2--many years after other immunopathies were found, in PGA3--as first auto-aggressive disease. Our analysis suggests the necessity of detailed check-ups on patients with Addison-Biermer's anaemia, as with time they may develop other diseases, especially hypothyroidism and/or PGA failure. On the contrary, in individuals with thyroid gland diseases and PGA syndromes further checkups should be megaloblastic anaemia-sensitive. In both cases it is important to consider substitutive treatment. The possibility of family coexisting both pernicious anaemia and autoimmune endocrinopathies needs diagnostics of members of the patient's family.

Evaluation of site effects on ground motions based on equivalent linear site response analysis and liquefaction potential in Chennai, south India

NASA Astrophysics Data System (ADS)

Nampally, Subhadra; Padhy, Simanchal; Trupti, S.; Prabhakar Prasad, P.; Seshunarayana, T.

2018-05-01

We study local site effects with detailed geotechnical and geophysical site characterization to evaluate the site-specific seismic hazard for the seismic microzonation of the Chennai city in South India. A Maximum Credible Earthquake (MCE) of magnitude 6.0 is considered based on the available seismotectonic and geological information of the study area. We synthesized strong ground motion records for this target event using stochastic finite-fault technique, based on a dynamic corner frequency approach, at different sites in the city, with the model parameters for the source, site, and path (attenuation) most appropriately selected for this region. We tested the influence of several model parameters on the characteristics of ground motion through simulations and found that stress drop largely influences both the amplitude and frequency of ground motion. To minimize its influence, we estimated stress drop after finite bandwidth correction, as expected from an M6 earthquake in Indian peninsula shield for accurately predicting the level of ground motion. Estimates of shear wave velocity averaged over the top 30 m of soil (V S30) are obtained from multichannel analysis of surface wave (MASW) at 210 sites at depths of 30 to 60 m below the ground surface. Using these V S30 values, along with the available geotechnical information and synthetic ground motion database obtained, equivalent linear one-dimensional site response analysis that approximates the nonlinear soil behavior within the linear analysis framework was performed using the computer program SHAKE2000. Fundamental natural frequency, Peak Ground Acceleration (PGA) at surface and rock levels, response spectrum at surface level for different damping coefficients, and amplification factors are presented at different sites of the city. Liquefaction study was done based on the V S30 and PGA values obtained. The major findings suggest show that the northeast part of the city is characterized by (i) low V S30 values (< 200 m/s) associated with alluvial deposits, (ii) relatively high PGA value, at the surface, of about 0.24 g, and (iii) factor of safety and liquefaction below unity at three sites (no. 12, no. 37, and no. 70). Thus, this part of the city is expected to experience damage for the expected M6 target event.

Seismic hazard map of the western hemisphere

USGS Publications Warehouse

Shedlock, K.M.; Tanner, J.G.

1999-01-01

Vulnerability to natural disasters increases with urbanization and development of associated support systems (reservoirs, power plants, etc.). Catastrophic earthquakes account for 60% of worldwide casualties associated with natural disasters. Economic damage from earthquakes is increasing, even in technologically advanced countries with some level of seismic zonation, as shown by the 1989 Loma Prieta, CA ($6 billion), 1994 Northridge, CA ($ 25 billion), and 1995 Kobe, Japan (> $ 100 billion) earthquakes. The growth of megacities in seismically active regions around the world often includes the construction of seismically unsafe buildings and infrastructures, due to an insufficient knowledge of existing seismic hazard. Minimization of the loss of life, property damage, and social and economic disruption due to earthquakes depends on reliable estimates of seismic hazard. National, state, and local governments, decision makers, engineers, planners, emergency response organizations, builders, universities, and the general public require seismic hazard estimates for land use planning, improved building design and construction (including adoption of building construction codes), emergency response preparedness plans, economic forecasts, housing and employment decisions, and many more types of risk mitigation. The seismic hazard map of the Americas is the concatenation of various national and regional maps, involving a suite of approaches. The combined maps and documentation provide a useful global seismic hazard framework and serve as a resource for any national or regional agency for further detailed studies applicable to their needs. This seismic hazard map depicts Peak Ground Acceleration (PGA) with a 10% chance of exceedance in 50 years for the western hemisphere. PGA, a short-period ground motion parameter that is proportional to force, is the most commonly mapped ground motion parameter because current building codes that include seismic provisions specify the horizontal force a building should be able to withstand during an earthquake. This seismic hazard map of the Americas depicts the likely level of short-period ground motion from earthquakes in a fifty-year window. Short-period ground motions effect short-period structures (e.g., one-to-two story buildings). The largest seismic hazard values in the western hemisphere generally occur in areas that have been, or are likely to be, the sites of the largest plate boundary earthquakes. Although the largest earthquakes ever recorded are the 1960 Chile and 1964 Alaska subduction zone earthquakes, the largest seismic hazard (PGA) value in the Americas is in Southern California (U.S.), along the San Andreas fault.

Revised seismic hazard map for the Kyrgyz Republic

NASA Astrophysics Data System (ADS)

Fleming, Kevin; Ullah, Shahid; Parolai, Stefano; Walker, Richard; Pittore, Massimiliano; Free, Matthew; Fourniadis, Yannis; Villiani, Manuela; Sousa, Luis; Ormukov, Cholponbek; Moldobekov, Bolot; Takeuchi, Ko

2017-04-01

As part of a seismic risk study sponsored by the World Bank, a revised seismic hazard map for the Kyrgyz Republic has been produced, using the OpenQuake-engine developed by the Global Earthquake Model Foundation (GEM). In this project, an earthquake catalogue spanning a period from 250 BCE to 2014 was compiled and processed through spatial and temporal declustering tools. The territory of the Kyrgyz Republic was divided into 31 area sources defined based on local seismicity, including a total area covering 200 km from the border. The results are presented in terms of Peak Ground Acceleration (PGA). In addition, macroseismic intensity estimates, making use of recent intensity prediction equations, were also provided, given that this measure is still widely used in Central Asia. In order to accommodate the associated epistemic uncertainty, three ground motion prediction equations were used in a logic tree structure. A set of representative earthquake scenarios were further identified based on historical data and the nature of the considered faults. The resulting hazard map, as expected, follows the country's seismicity, with the highest levels of hazard in the northeast, south and southwest of the country, with an elevated part around the centre. When considering PGA, the hazard is slightly greater for major urban centres than in previous works (e.g., Abdrakhmatov et al., 2003), although the macroseismic intensity estimates are less than previous studies, e.g., Ulomov (1999). For the scenario assessments, the examples that most affect the urban centres assessed are the Issyk Ata fault (in particular for Bishkek), the Chilik and Kemin faults (in particular Balykchy and Karakol), the Ferghana Valley fault system (in particular Osh, Jalah-Abad and Uzgen), the Oinik Djar fault (Naryn) and the central and western Talas-Ferghanafaukt (Talas). Finally, while site effects (in particular, those dependent on the upper-most geological structure) have an obvious effect on the final hazard level, this is still not fully accounted for, even if a nation-wide first order Vs30 model (i.e., from the USGS) is available. Abdrakhmatov, K., Havenith, H.-B., Delvaux, D., Jongsmans, D. and Trefois, P. (2003) Probabilistic PGA and Arias Intensity maps of Kyrgyzstan (Central Asia), Journal of Seismology, 7, 203-220. Ulomov, V.I., The GSHAP Region 7 working group (1999) Seismic hazard of Northern Eurasia, Annali di Geofisica, 42, 1012-1038.

Constraining ground motion parameters and determining the historic earthquake that damaged the vaults underneath the Old City of Jerusalem

NASA Astrophysics Data System (ADS)

Yagoda-Biran, G.; Hatzor, Y. H.

2013-12-01

Evidence for seismically induced damage are preserved in historic masonry structures below the Old City of Jerusalem at a site known locally as the 'Western Wall Tunnels' complex, possibly one of the most important tourist attractions in the world. In the tunnels, structures dated to 500 BC and up until modern times have been uncovered by recent archeological excavation. One of the interesting findings is a 100 m long bridge, composed of two rows of barrel vaults, believed to have been constructed during the 3rd century AD to allow easy access to the Temple Mount. In one of the vaults a single masonry block is displaced 7 cm downward with respect to its neighbors (see figure below). Since the damage seems seismically driven, back analysis of the damage with the numerical Discontinuous Deformation Analysis (DDA) method was performed, in order to constrain the peak ground acceleration (PGA) that had caused the damage. First the numerical method used for back analysis was verified with an analytical solution for the case of a rocking monolithic column, then validated with experimental results for site response analysis. The verification and validation prove the DDA is capable of handling dynamic and wave propagation problems. Next, the back analysis was performed. Results of the dynamic numerical simulations suggest that the damage observed at the vault was induced by seismic vibrations that must have taken place before the bridge was buried underground, namely when it was still in service. We find that the PGA required for causing the observed damage was high - between 1.5 and 2 g. The PGA calculated for Jerusalem on the basis of established attenuation relationships for historic earthquakes that struck the region during the relevant time period is about one order of magnitude lower: 0.14 and 0.48 g, for the events that took place at 362 and 746 AD, respectively. This discrepancy is explained by local site effects that must have amplified bedrock ground motions by a factor of up to 10. This result clearly illustrates the significance of incorporating local site effects when assessing the seismic hazard associated with specific regions in general, and particularly in cities where soft layers separate between the bedrock and the ground surface. The displaced block in Vault 21 in the Western Wall Tunnels.

Systematic analysis of nonlinear ground motion and temporal changes of material properties produced by small and medium earthquakes

NASA Astrophysics Data System (ADS)

Wu, C.; Peng, Z.; Ben-Zion, Y.

2009-12-01

Recent studies based on spectral ratio analysis have found clear temporal changes of material properties in the shallow crust and around active fault zones during large earthquakes with peak ground acceleration (PGA) larger than 100-200 gals (e.g., Sawazaki et al., GRL, 2006; Rubenstein et al., JGR, 2007; Wu et al., GJI, 2009). The temporal evolution of properties is generally characterized by a clear drop of resonant frequency and increased damping, followed by logarithmic recoveries with time. The shift in resonant frequency and damping are considered two hallmarks of nonlinear response associated with increasing material damage. However, an existing damage can produce similar changes in resonance curves with increasing wave amplitude, even in cases when the material damage does not increase (Lyakhovsky et al., GJI, 2009). In such cases the recovery of resonance properties with reduced source amplitude should be essentially instantaneous. It is important to distinguish with in situ seismic data nonlinear wave propagation effects that reflect fixed vs. evolving material damage. Here we systematically analyze temporal changes of material properties and nonlinear response associated with small and medium earthquakes, using seismic data recorded by the Japanese Strong Motion Network KIK-Net, a temporary 10-station PASSCAL seismic network along the North Anatolian Fault in Turkey, and the borehole and surface stations around the Parkfield section of the San Andreas fault. We compute the spectral ratios of windowed records from a pair of target and reference stations, and apply the sliding-window to the entire seismic records including the pre-event noise, P and S waves, and the early and late S-coda waves. We choose small and medium events to reduce the effects from additional material damage and use small sliding-window size to capture the subtle changes in the spectral ratios. The spectral ratio traces from windows within certain PGA ranges are then stacked to enhance the stability of the results. The preliminary results from the KIK-Net data suggest that the resonant frequency starts to decrease for PGA levels of several tens of gals, followed by near instantaneous recovery. Updated results from analysis of all the datasets will be presented in the meeting.

Probabilistic seismic hazard characterization and design parameters for the Pantex Plant

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bernreuter, D. L.; Foxall, W.; Savy, J. B.

1998-10-19

The Hazards Mitigation Center at Lawrence Livermore National Laboratory (LLNL) updated the seismic hazard and design parameters at the Pantex Plant. The probabilistic seismic hazard (PSH) estimates were first updated using the latest available data and knowledge from LLNL (1993, 1998), Frankel et al. (1996), and other relevant recent studies from several consulting companies. Special attention was given to account for the local seismicity and for the system of potentially active faults associated with the Amarillo-Wichita uplift. Aleatory (random) uncertainty was estimated from the available data and the epistemic (knowledge) uncertainty was taken from results of similar studies. Special attentionmore » was given to soil amplification factors for the site. Horizontal Peak Ground Acceleration (PGA) and 5% damped uniform hazard spectra were calculated for six return periods (100 yr., 500 yr., 1000 yr., 2000 yr., 10,000 yr., and 100,000 yr.). The design parameters were calculated following DOE standards (DOE-STD-1022 to 1024). Response spectra for design or evaluation of Performance Category 1 through 4 structures, systems, and components are presented.« less

Experimental and analytical studies on multiple tuned mass dampers for seismic protection of porcelain electrical equipment

NASA Astrophysics Data System (ADS)

Bai, Wen; Dai, Junwu; Zhou, Huimeng; Yang, Yongqiang; Ning, Xiaoqing

2017-10-01

Porcelain electrical equipment (PEE), such as current transformers, is critical to power supply systems, but its seismic performance during past earthquakes has not been satisfactory. This paper studies the seismic performance of two typical types of PEE and proposes a damping method for PEE based on multiple tuned mass dampers (MTMD). An MTMD damping device involving three mass units, named a triple tuned mass damper (TTMD), is designed and manufactured. Through shake table tests and finite element analysis, the dynamic characteristics of the PEE are studied and the effectiveness of the MTMD damping method is verified. The adverse influence of MTMD redundant mass to damping efficiency is studied and relevant equations are derived. MTMD robustness is verified through adjusting TTMD control frequencies. The damping effectiveness of TTMD, when the peak ground acceleration far exceeds the design value, is studied. Both shake table tests and finite element analysis indicate that MTMD is effective and robust in attenuating PEE seismic responses. TTMD remains effective when the PGA far exceeds the design value and when control deviations are considered.

How angry was the ancient Greek god Poseidon in 141/142 A.D.?

NASA Astrophysics Data System (ADS)

Şahin, Murat; Elitez, İrem; Yaltırak, Cenk

2017-04-01

Poseidon, also known as "God of Sea" or "Earth-Shaker", was one of the Olympian's Gods in the Greek mythology. It was a common belief that Poseidon shows his rage by tsunamis and earthquakes. So, the how angry Poseidon in 141/142 A.D.? According to the historical records, the whole area including Lycian cities and Rhodes was affected by a destructive earthquake and a following tsunami in 141/142. After these events the emperor of Greeks made donations to the Lycian cities and Rhodes for their recovery with relative to the damage and importance of the city. 141/142 earthquake had a considerable amount of damage on 28 ancient cities. With respect to the historical catalogues, this earthquake had at least 9-10 intensity and caused a tsunami in Rhodes and harbour of the ancient city of Patara. In this study, we try to restrict the magnitude of the event by using PGA (peak ground acceleration), MMI (Modified Mercalli Intensity), tsunami modelling and amount of aids. Our preliminary results suggest that this event has to be bigger or equal magnitude 8.

Non-woven PGA/PVA fibrous mesh as an appropriate scaffold for chondrocyte proliferation.

PubMed

Rampichová, M; Koštáková, E; Filová, E; Prosecká, E; Plencner, M; Ocheretná, L; Lytvynets, A; Lukáš, D; Amler, E

2010-01-01

Non-woven textile mesh from polyglycolic acid (PGA) was found as a proper material for chondrocyte adhesion but worse for their proliferation. Neither hyaluronic acid nor chitosan nor polyvinyl alcohol (PVA) increased chondrocyte adhesion. However, chondrocyte proliferation suffered from acidic byproducts of PGA degradation. However, the addition of PVA and/or chitosan into a wet-laid non-woven textile mesh from PGA improved chondrocyte proliferation seeded in vitro on the PGA-based composite scaffold namely due to a diminished acidification of their microenvironment. This PVA/PGA composite mesh used in combination with a proper hydrogel minimized the negative effect of PGA degradation without dropping positive parameters of the PGA wet-laid non-woven textile mesh. In fact, presence of PVA and/or chitosan in the PGA-based wet-laid non-woven textile mesh even advanced the PGA-based wet-laid non-woven textile mesh for chondrocyte seeding and artificial cartilage production due to a positive effect of PVA in such a scaffold on chondrocyte proliferation.

Possible Mechanisms for Generation of Anomalously High PGA During the 2011 Tohoku Earthquake

NASA Astrophysics Data System (ADS)

Pavlenko, O. V.

2017-08-01

Mechanisms are suggested that could explain anomalously high PGAs (peak ground accelerations) exceeding 1 g recorded during the 2011 Tohoku earthquake ( M w = 9.0). In my previous research, I studied soil behavior during the Tohoku earthquake based on KiK-net vertical array records and revealed its `atypical' pattern: instead of being reduced in the near-source zones as usually observed during strong earthquakes, shear moduli in soil layers increased, indicating soil hardening, and reached their maxima at the moments of the highest intensity of strong motion, then reduced. We could explain this assuming that the soils experienced some additional compression. The observed changes in the shapes of acceleration time histories with distance from the source, such as a decrease of the duration and an increase of the intensity of strong motion, indicate phenomena similar to overlapping of seismic waves and a shock wave generation, which led to the compression of soils. The phenomena reach their maximum in the vicinity of stations FKSH10, TCGH16, and IBRH11, where the highest PGAs were recorded; at larger epicentral distances, PGAs sharply fall. Thus, the occurrence of anomalously high PGAs on the surface can result from the combination of the overlapping of seismic waves at the bottoms of soil layers and their increased amplification by the pre-compressed soils.

Ground motion models used in the 2014 U.S. National Seismic Hazard Maps

USGS Publications Warehouse

Rezaeian, Sanaz; Petersen, Mark D.; Moschetti, Morgan P.

2015-01-01

The National Seismic Hazard Maps (NSHMs) are an important component of seismic design regulations in the United States. This paper compares hazard using the new suite of ground motion models (GMMs) relative to hazard using the suite of GMMs applied in the previous version of the maps. The new source characterization models are used for both cases. A previous paper (Rezaeian et al. 2014) discussed the five NGA-West2 GMMs used for shallow crustal earthquakes in the Western United States (WUS), which are also summarized here. Our focus in this paper is on GMMs for earthquakes in stable continental regions in the Central and Eastern United States (CEUS), as well as subduction interface and deep intraslab earthquakes. We consider building code hazard levels for peak ground acceleration (PGA), 0.2-s, and 1.0-s spectral accelerations (SAs) on uniform firm-rock site conditions. The GMM modifications in the updated version of the maps created changes in hazard within 5% to 20% in WUS; decreases within 5% to 20% in CEUS; changes within 5% to 15% for subduction interface earthquakes; and changes involving decreases of up to 50% and increases of up to 30% for deep intraslab earthquakes for most U.S. sites. These modifications were combined with changes resulting from modifications in the source characterization models to obtain the new hazard maps.

Revision of Time-Independent Probabilistic Seismic Hazard Maps for Alaska

USGS Publications Warehouse

Wesson, Robert L.; Boyd, Oliver S.; Mueller, Charles S.; Bufe, Charles G.; Frankel, Arthur D.; Petersen, Mark D.

2007-01-01

We present here time-independent probabilistic seismic hazard maps of Alaska and the Aleutians for peak ground acceleration (PGA) and 0.1, 0.2, 0.3, 0.5, 1.0 and 2.0 second spectral acceleration at probability levels of 2 percent in 50 years (annual probability of 0.000404), 5 percent in 50 years (annual probability of 0.001026) and 10 percent in 50 years (annual probability of 0.0021). These maps represent a revision of existing maps based on newly obtained data and assumptions reflecting best current judgments about methodology and approach. These maps have been prepared following the procedures and assumptions made in the preparation of the 2002 National Seismic Hazard Maps for the lower 48 States. A significant improvement relative to the 2002 methodology is the ability to include variable slip rate along a fault where appropriate. These maps incorporate new data, the responses to comments received at workshops held in Fairbanks and Anchorage, Alaska, in May, 2005, and comments received after draft maps were posted on the National Seismic Hazard Mapping Web Site. These maps will be proposed for adoption in future revisions to the International Building Code. In this documentation we describe the maps and in particular explain and justify changes that have been made relative to the 1999 maps. We are also preparing a series of experimental maps of time-dependent hazard that will be described in future documents.

Impact of Thermal Degradation of Cyanidin-3-O-Glucoside of Haskap Berry on Cytotoxicity of Hepatocellular Carcinoma HepG2 and Breast Cancer MDA-MB-231 Cells

PubMed Central

Pace, Eric; Jiang, Yuanyuan; Clemens, Amy; Crossman, Tennille

2018-01-01

Cyanidin-3-O-glucoside (C3G), the predominant anthocyanin in haskap berries (Lonicera caerulea L.), possesses antioxidant and many other biological activities. This study investigated the impact of temperature and pH on the degradation of the C3G-rich haskap fraction. The effect of the thermal degradation products on the viability of hepatocellular carcinoma HepG2 and breast cancer MDA-MB-231 cells was also studied in vitro. Using column chromatography, the C3G-rich fraction was isolated from acetone extracts of haskap berries. The C3G stability in these fractions was studied under elevated temperatures (70 °C and 90 °C) at three different pH values (2.5, 4, and 7) by monitoring the concentration of C3G and its major degradation products, protocatechuic acid (PCA) and phloroglucinaldehyde (PGA), using liquid chromatography mass spectrometry. Significant degradation of C3G was observed at elevated temperatures and at neutral pH. Conversely, the PCA and PGA concentration increased at higher pH and temperature. Similar to C3G, neutral pH also has a prominent effect on the degradation of PGA, which is further accelerated by heating. The C3G-rich fraction exhibited dose-dependent inhibitory effects on cell metabolic activity when the HepG2 cells were exposed for 48 h. Interestingly, PGA but not PCA exhibited cytotoxic effects against both MDA-MB-231 and HepG2 cells. The results suggest that thermal food processing of haskap could influence its biological properties due to the degradation of C3G. PMID:29382057

Impact of Thermal Degradation of Cyanidin-3-O-Glucoside of Haskap Berry on Cytotoxicity of Hepatocellular Carcinoma HepG2 and Breast Cancer MDA-MB-231 Cells.

PubMed

Pace, Eric; Jiang, Yuanyuan; Clemens, Amy; Crossman, Tennille; Rupasinghe, H P Vasantha

2018-01-27

Cyanidin-3 -O -glucoside (C3G), the predominant anthocyanin in haskap berries ( Lonicera caerulea L.), possesses antioxidant and many other biological activities. This study investigated the impact of temperature and pH on the degradation of the C3G-rich haskap fraction. The effect of the thermal degradation products on the viability of hepatocellular carcinoma HepG2 and breast cancer MDA-MB-231 cells was also studied in vitro. Using column chromatography, the C3G-rich fraction was isolated from acetone extracts of haskap berries. The C3G stability in these fractions was studied under elevated temperatures (70 °C and 90 °C) at three different pH values (2.5, 4, and 7) by monitoring the concentration of C3G and its major degradation products, protocatechuic acid (PCA) and phloroglucinaldehyde (PGA), using liquid chromatography mass spectrometry. Significant degradation of C3G was observed at elevated temperatures and at neutral pH. Conversely, the PCA and PGA concentration increased at higher pH and temperature. Similar to C3G, neutral pH also has a prominent effect on the degradation of PGA, which is further accelerated by heating. The C3G-rich fraction exhibited dose-dependent inhibitory effects on cell metabolic activity when the HepG2 cells were exposed for 48 h. Interestingly, PGA but not PCA exhibited cytotoxic effects against both MDA-MB-231 and HepG2 cells. The results suggest that thermal food processing of haskap could influence its biological properties due to the degradation of C3G.

Exploring uncertainties in probabilistic seismic hazard estimates for Quito

NASA Astrophysics Data System (ADS)

Beauval, Celine; Yepes, Hugo; Audin, Laurence; Alvarado, Alexandra; Nocquet, Jean-Mathieu

2016-04-01

In the present study, probabilistic seismic hazard estimates at 475 years return period for Quito, capital city of Ecuador, show that the crustal host zone is the only source zone that determines the city's hazard levels for such return period. Therefore, the emphasis is put on identifying the uncertainties characterizing the host zone, i.e. uncertainties in the recurrence of earthquakes expected in the zone and uncertainties on the ground motions that these earthquakes may produce. As the number of local strong-ground motions is still scant, ground-motion prediction equations are imported from other regions. Exploring recurrence models for the host zone based on different observations and assumptions, and including three GMPE candidates (Akkar and Bommer 2010, Zhao et al. 2006, Boore and Atkinson 2008), we obtain a significant variability on the estimated acceleration at 475 years (site coordinates: -78.51 in longitude and -0.2 in latitude, VS30 760 m/s): 1) Considering historical earthquake catalogs, and relying on frequency-magnitude distributions where rates for magnitudes 6-7 are extrapolated from statistics of magnitudes 4.5-6.0 mostly in the 20th century, the acceleration at the PGA varies between 0.28g and 0.55g with a mean value around 0.4g. The results show that both the uncertainties in the GMPE choice and in the seismicity model are responsible for this variability. 2) Considering slip rates inferred form geodetic measurements across the Quito fault system, and assuming that most of the deformation occurs seismically (conservative hypothesis), leads to a much greater range of accelerations, 0.43 to 0.73g for the PGA (with a mean of 0.55g). 3) Considering slip rates inferred from geodetic measurements, and assuming that 50% only of the deformation is released in earthquakes (partially locked fault, model based on 15 years of GPS data), leads to a range of accelerations 0.32g to 0.58g for the PGA, with a mean of 0.42g. These accelerations are in agreement with the catalog-based hazard estimates. 4) Restricting the occurrence of magnitudes 6 to 7 to the Quito fault (a simplified geometry), applying the three initial GMPEs (Akkar and Bommer 2010, Zhao et al. 2006, Boore and Atkinson 2008) or GMPEs including a hanging-wall coefficient (Abrahamson and Silva 2008, Chiou and Youngs 2008), increases the hazard by 20 to 40% at sites located above the fault plane (range 0.42g to 0.68g at the considered site). Strong hypothesis are required to define a simple fault plane and to define the recurrence of earthquakes on this fault plane, therefore these results must be taken with great caution. However they demonstrate that taking into account faults in hazard calculations can have a major impact. Modeling the recurrence based on the past earthquake catalog, and relying on an areal source zone model, gives a mean value around 0.4g for the PGA at 475 years in Quito. This mean value is for a site on rock and site effects need to be further taken into account. Nonetheless, based on various exercises, we show that if taking into account the fault itself in the hazard calculations, much higher values can be obtained for sites located above the fault.

Targeted Changes of the Cell Wall Proteome Influence Candida albicans Ability to Form Single- and Multi-strain Biofilms

PubMed Central

Walker, Louise A.; Martin-Yken, Hélène; Dague, Etienne; Legrand, Mélanie; Lee, Keunsook; Chauvel, Murielle; Firon, Arnaud; Rossignol, Tristan; Richard, Mathias L.; Munro, Carol A.; Bachellier-Bassi, Sophie; d'Enfert, Christophe

2014-01-01

Biofilm formation is an important virulence trait of the pathogenic yeast Candida albicans. We have combined gene overexpression, strain barcoding and microarray profiling to screen a library of 531 C. albicans conditional overexpression strains (∼10% of the genome) for genes affecting biofilm development in mixed-population experiments. The overexpression of 16 genes increased strain occupancy within a multi-strain biofilm, whereas overexpression of 4 genes decreased it. The set of 16 genes was significantly enriched for those encoding predicted glycosylphosphatidylinositol (GPI)-modified proteins, namely Ihd1/Pga36, Phr2, Pga15, Pga19, Pga22, Pga32, Pga37, Pga42 and Pga59; eight of which have been classified as pathogen-specific. Validation experiments using either individually- or competitively-grown overexpression strains revealed that the contribution of these genes to biofilm formation was variable and stage-specific. Deeper functional analysis of PGA59 and PGA22 at a single-cell resolution using atomic force microscopy showed that overexpression of either gene increased C. albicans ability to adhere to an abiotic substrate. However, unlike PGA59, PGA22 overexpression led to cell cluster formation that resulted in increased sensitivity to shear forces and decreased ability to form a single-strain biofilm. Within the multi-strain environment provided by the PGA22-non overexpressing cells, PGA22-overexpressing cells were protected from shear forces and fitter for biofilm development. Ultrastructural analysis, genome-wide transcript profiling and phenotypic analyses in a heterologous context suggested that PGA22 affects cell adherence through alteration of cell wall structure and/or function. Taken together, our findings reveal that several novel predicted GPI-modified proteins contribute to the cooperative behaviour between biofilm cells and are important participants during C. albicans biofilm formation. Moreover, they illustrate the power of using signature tagging in conjunction with gene overexpression for the identification of novel genes involved in processes pertaining to C. albicans virulence. PMID:25502890

Ground Motion Prediction Equations for Western Saudi Arabia from a Reference Model

NASA Astrophysics Data System (ADS)

Kiuchi, R.; Mooney, W. D.; Mori, J. J.; Zahran, H. M.; Al-Raddadi, W.; Youssef, S.

2017-12-01

Western Saudi Arabia is surrounded by several active seismic zones such as the Red Sea and the Gulf of Aqaba where a destructive magnitude 7.3 event occurred in 1995. Over the last decade, the Saudi Geological Survey (SGS) has deployed a dense seismic network that has made it possible to monitor seismic activity more accurately. For example, the network has detected multiple seismic swarms beneath the volcanic fields in western Saudi Arabia. The most recent damaging event was a M5.7 earthquake that occurred in 2009 at Harrat Lunayyir. In terms of seismic hazard assessment, Zahran et al. (2015; 2016) presented a Probabilistic Seismic Hazard Assessment (PSHA) for western Saudi Arabia that was developed using published Ground Motion Prediction Equations (GMPEs) from areas outside of Saudi Arabia. In this study, we consider 41 earthquakes of M 3.0 - 5.4, recorded on 124 stations of the SGS network, to create a set of 442 peak ground acceleration (PGA) and peak ground velocity (PGV) records with a range of epicentral distances from 3 km to 400 km. We use the GMPE model BSSA14 (Boore et al., 2014) as a reference model to estimate our own best-fitting coefficients from a regression analysis using the events occurred in western Saudi Arabia. For epicentral distances less than 100 km, our best fitting model has different source scaling in comparison with the GMPE of BSSA14 adjusted for the California region. In addition, our model indicates that the peak amplitudes have less attenuation in western Saudi Arabia than in California.

Poly-N-acetylglucosamine mediates biofilm formation and detergent resistance in Aggregatibacter actinomycetemcomitans

PubMed Central

Izano, Era A.; Sadovskaya, Irina; Wang, Hailin; Vinogradov, Evgeny; Ragunath, Chandran; Ramasubbu, Narayanan; Jabbouri, Saïd; Perry, Malcolm B.; Kaplan, Jeffrey B.

2008-01-01

Clinical isolates of the periodontopathogen Aggregatibacter actinomycetemcomitans form matrix-encased biofilms on abiotic surfaces in vitro. A major component of the A. actinomycetemcomitans biofilm matrix is PGA, a hexosamine-containing polysaccharide that mediates intercellular adhesion. In this report we describe studies on the purification, structure, genetics and function of A. actinomycetemcomitans PGA. We found that PGA was very tightly attached to A. actinomycetemcomitans biofilm cells and could be efficiently separated from the cells only by phenol extraction. A. actinomycetemcomitans PGA copurified with LPS on a gel filtration column. 1H-NMR spectra of purified A. actinomycetemcomitans PGA were consistent with a structure containing a linear chain of N-acetyl-D-glucosamine residues in β(1,6) linkage. Genetic analyses indicated that all four genes of the pgaABCD locus were required for PGA production in A. actinomycetemcomitans. PGA mutant strains still formed biofilms in vitro. Unlike wild-type biofilms, however, PGA mutant biofilms were sensitive to detachment by DNase I and proteinase K. Treatment of A. actinomycetemcomitans biofilms with the PGA-hydrolyzing enzyme dispersin B made them 3 log units more sensitive to killing by the cationic detergent cetylpyridinium chloride. Our findings suggest that PGA, extracellular DNA and proteinaceous adhesins all contribute to the structural integrity of the A. actinomycetemcomitans biofilm matrix. PMID:17851029

Seismic hazard in Hawaii: High rate of large earthquakes and probabilistics ground-motion maps

USGS Publications Warehouse

Klein, F.W.; Frankel, A.D.; Mueller, C.S.; Wesson, R.L.; Okubo, P.G.

2001-01-01

The seismic hazard and earthquake occurrence rates in Hawaii are locally as high as that near the most hazardous faults elsewhere in the United States. We have generated maps of peak ground acceleration (PGA) and spectral acceleration (SA) (at 0.2, 0.3 and 1.0 sec, 5% critical damping) at 2% and 10% exceedance probabilities in 50 years. The highest hazard is on the south side of Hawaii Island, as indicated by the MI 7.0, MS 7.2, and MI 7.9 earthquakes, which occurred there since 1868. Probabilistic values of horizontal PGA (2% in 50 years) on Hawaii's south coast exceed 1.75g. Because some large earthquake aftershock zones and the geometry of flank blocks slipping on subhorizontal decollement faults are known, we use a combination of spatially uniform sources in active flank blocks and smoothed seismicity in other areas to model seismicity. Rates of earthquakes are derived from magnitude distributions of the modem (1959-1997) catalog of the Hawaiian Volcano Observatory's seismic network supplemented by the historic (1868-1959) catalog. Modern magnitudes are ML measured on a Wood-Anderson seismograph or MS. Historic magnitudes may add ML measured on a Milne-Shaw or Bosch-Omori seismograph or MI derived from calibrated areas of MM intensities. Active flank areas, which by far account for the highest hazard, are characterized by distributions with b slopes of about 1.0 below M 5.0 and about 0.6 above M 5.0. The kinked distribution means that large earthquake rates would be grossly under-estimated by extrapolating small earthquake rates, and that longer catalogs are essential for estimating or verifying the rates of large earthquakes. Flank earthquakes thus follow a semicharacteristic model, which is a combination of background seismicity and an excess number of large earthquakes. Flank earthquakes are geometrically confined to rupture zones on the volcano flanks by barriers such as rift zones and the seaward edge of the volcano, which may be expressed by a magnitude distribution similar to that including characteristic earthquakes. The island chain northwest of Hawaii Island is seismically and volcanically much less active. We model its seismic hazard with a combination of a linearly decaying ramp fit to the cataloged seismicity and spatially smoothed seismicity with a smoothing half-width of 10 km. We use a combination of up to four attenuation relations for each map because for either PGA or SA, there is no single relation that represents ground motion for all distance and magnitude ranges. Great slumps and landslides visible on the ocean floor correspond to catastrophes with effective energy magnitudes ME above 8.0. A crude estimate of their frequency suggests that the probabilistic earthquake hazard is at least an order of magnitude higher for flank earthquakes than that from submarine slumps.

In vitro evaluation of new functional properties of poly-γ-glutamic acid produced by Bacillus subtilis D7.

PubMed

Lee, Na-Ri; Go, Tae-Hun; Lee, Sang-Mee; Jeong, Seong-Yun; Park, Geun-Tae; Hong, Chang-Oh; Son, Hong-Joo

2014-04-01

We investigated the functionality of poly-γ-glutamic acid (γ-PGA), which is produced by Bacillus subtilis D7, for its potential applications in medicine and cosmetics. The γ-PGA had angiotensin-converting enzyme (ACE) inhibition activity. ACE inhibition activity was dependent on the γ-PGA concentration; the highest ACE inhibition activity was observed at 1.25 mg/l of γ-PGA. IC50 (0.108 mg/ml) of the γ-PGA was lower than that of standard ACE inhibitory drug, N-[(S)-mercapto-2-methylpropionyl]-L-proline (0.247 mg/ml). The γ-PGA also had water-holding capacity and hygroscopicity. Furthermore, the γ-PGA inhibited growth of some pathogenic bacteria, including Listeria monocytogenes, Salmonella typhimurium, Staphylococcus aureus, Klebsiella pneumonia and Esherichia coli. The γ-PGA exhibited a good metal adsorption capacity; Cr (VI) adsorption capacity of γ-PGA increased with decreasing pH, and the maximal adsorption was observed at pH 2. Our results suggest that γ-PGA may be expected to be widely applied in cosmetics, biomedical and environmental industries with the feature of being less harmful to humans and the environment.

Tunable pH and redox-responsive drug release from curcumin conjugated γ-polyglutamic acid nanoparticles in cancer microenvironment.

PubMed

Pillarisetti, Shameer; Maya, S; Sathianarayanan, S; Jayakumar, R

2017-11-01

Tunable pH and redox responsive polymer was prepared using γ-polyglutamic acid (γ-PGA) with linker 3-mercaptopropionic acid (3-MPA) (γ-PGA_SH) via oxidation to obtain redox responsive disulfide (γ-PGA_SS) backbone and adipic acid dihydrazide (ADH) (γ-PGA_SS_ADH) with hydrazide functional group for pH responsiveness. Further curcumin (Cur) was conjugated through hydrazone bond of the γ-PGA_SS_ADH via Schiff base reaction to obtain (γ-PGA_SS_ADH_Cur). The prepared systems were characterized by Fourier transform infrared spectroscopy (FTIR), Raman spectroscopy, Electrospray ionization quadrupole time-of-flight mass spectrometry (ESI-Qq-TOF-MS/MS) and Solid state nuclear magnetic resonance (SS NMR) techniques. γ-PGA_SS_ADH_Cur formed self-assembled core shell nanoparticles (NPs) in existence of stabilized aqueous medium. γ-PGA_SS_ADH_Cur NPs maintained its stability in physiological condition. NPs tunable Cur release and cytotoxicity were observed for γ-PGA_SS_ADH_Cur NPs in both acidic and redox conditions mimicking the cancer microenvironment. γ-PGA_SS_ADH_Cur NPs uptake study showed via endocytosis mechanism resulted in the lysosomal entrapment of these NPs within the cell. γ-PGA_SS_ADH_Cur NPs exhibited a dual stimuli responsive drug delivery and can be used as a smart and potential drug delivery system in cancer microenvironment. Copyright © 2017 Elsevier B.V. All rights reserved.

γ-PGA Hydrolases of Phage Origin in Bacillus subtilis and Other Microbial Genomes.

PubMed

Mamberti, Stefania; Prati, Paola; Cremaschi, Paolo; Seppi, Claudio; Morelli, Carlo F; Galizzi, Alessandro; Fabbi, Massimo; Calvio, Cinzia

2015-01-01

Poly-γ-glutamate (γ-PGA) is an industrially interesting polymer secreted mainly by members of the class Bacilli which forms a shield able to protect bacteria from phagocytosis and phages. Few enzymes are known to degrade γ-PGA; among them is a phage-encoded γ-PGA hydrolase, PghP. The supposed role of PghP in phages is to ensure access to the surface of bacterial cells by dismantling the γ-PGA barrier. We identified four unannotated B. subtilis genes through similarity of their encoded products to PghP; in fact these genes reside in prophage elements of B. subtilis genome. The recombinant products of two of them demonstrate efficient polymer degradation, confirming that sequence similarity reflects functional homology. Genes encoding similar γ-PGA hydrolases were identified in phages specific for the order Bacillales and in numerous microbial genomes, not only belonging to that order. The distribution of the γ-PGA biosynthesis operon was also investigated with a bioinformatics approach; it was found that the list of organisms endowed with γ-PGA biosynthetic functions is larger than expected and includes several pathogenic species. Moreover in non-Bacillales bacteria the predicted γ-PGA hydrolase genes are preferentially found in species that do not have the genetic asset for polymer production. Our findings suggest that γ-PGA hydrolase genes might have spread across microbial genomes via horizontal exchanges rather than via phage infection. We hypothesize that, in natural habitats rich in γ-PGA supplied by producer organisms, the availability of hydrolases that release glutamate oligomers from γ-PGA might be a beneficial trait under positive selection.

Poly-γ-glutamic Acid Synthesis, Gene Regulation, Phylogenetic Relationships, and Role in Fermentation

PubMed Central

Hsueh, Yi-Huang; Huang, Kai-Yao; Kunene, Sikhumbuzo Charles; Lee, Tzong-Yi

2017-01-01

Poly-γ-glutamic acid (γ-PGA) is a biodegradable biopolymer produced by several bacteria, including Bacillus subtilis and other Bacillus species; it has good biocompatibility, is non-toxic, and has various potential biological applications in the food, pharmaceutical, cosmetic, and other industries. In this review, we have described the mechanisms of γ-PGA synthesis and gene regulation, its role in fermentation, and the phylogenetic relationships among various pgsBCAE, a biosynthesis gene cluster of γ-PGA, and pgdS, a degradation gene of γ-PGA. We also discuss potential applications of γ-PGA and highlight the established genetic recombinant bacterial strains that produce high levels of γ-PGA, which can be useful for large-scale γ-PGA production. PMID:29215550

Preliminary ground motion prediction equations for the Central and Eastern United States

NASA Astrophysics Data System (ADS)

Graizer, V.

2014-12-01

At the current stage I used the database created under the Next Generation Attenuations (NGA-East) project by Cramer et al. (2013). In contrast to the active tectonic environment in the Western US (WUS) the strong motion record database for the stable continental environment in the Central and Eastern US (CEUS) is not sufficient to create purely empirical ground motion prediction equations (GMPE) covering required for the PSHA magnitude (4.5

Seismic Hazard analysis of Adjaria Region in Georgia

NASA Astrophysics Data System (ADS)

Jorjiashvili, Nato; Elashvili, Mikheil

2014-05-01

The most commonly used approach to determining seismic-design loads for engineering projects is probabilistic seismic-hazard analysis (PSHA). The primary output from a PSHA is a hazard curve showing the variation of a selected ground-motion parameter, such as peak ground acceleration (PGA) or spectral acceleration (SA), against the annual frequency of exceedance (or its reciprocal, return period). The design value is the ground-motion level that corresponds to a preselected design return period. For many engineering projects, such as standard buildings and typical bridges, the seismic loading is taken from the appropriate seismic-design code, the basis of which is usually a PSHA. For more important engineering projects— where the consequences of failure are more serious, such as dams and chemical plants—it is more usual to obtain the seismic-design loads from a site-specific PSHA, in general, using much longer return periods than those governing code based design. Calculation of Probabilistic Seismic Hazard was performed using Software CRISIS2007 by Ordaz, M., Aguilar, A., and Arboleda, J., Instituto de Ingeniería, UNAM, Mexico. CRISIS implements a classical probabilistic seismic hazard methodology where seismic sources can be modelled as points, lines and areas. In the case of area sources, the software offers an integration procedure that takes advantage of a triangulation algorithm used for seismic source discretization. This solution improves calculation efficiency while maintaining a reliable description of source geometry and seismicity. Additionally, supplementary filters (e.g. fix a sitesource distance that excludes from calculation sources at great distance) allow the program to balance precision and efficiency during hazard calculation. Earthquake temporal occurrence is assumed to follow a Poisson process, and the code facilitates two types of MFDs: a truncated exponential Gutenberg-Richter [1944] magnitude distribution and a characteristic magnitude distribution [Youngs and Coppersmith, 1985]. Notably, the software can deal with uncertainty in the seismicity input parameters such as maximum magnitude value. CRISIS offers a set of built-in GMPEs, as well as the possibility of defining new ones by providing information in a tabular format. Our study shows that in case of Ajaristkali HPP study area, significant contribution to Seismic Hazard comes from local sources with quite low Mmax values, thus these two attenuation lows give us quite different PGA and SA values.

Reduction of enhanced rabbit intraocular pressure by instillation of pyroglutamic acid eye drops.

PubMed

Ito, Yoshimasa; Nagai, Noriaki; Okamoto, Norio; Shimomura, Yoshikazu; Nakanishi, Kunio; Tanaka, Ryuichiro

2013-01-01

L-Pyroglutamic acid (PGA) is an endogenous molecule derived from l-glutamate. We demonstrate the effects of PGA on intraocular pressure (IOP) in experimentally induced ocular hypertension in rabbits. In the in vitro and in vivo transcorneal penetration studies, the PGA solution (PGA in saline) did not penetrate the rabbit cornea. On the other hand, the penetration of PGA was improved by the addition of zinc chloride and 2-hydroxypropyl-β-cyclodextrin (HPCD), and PGA penetration was enhanced with increasing HPCD concentration. Therefore, PGA solutions containing 0.5% zinc chloride and 5% or 10% HPCD (PGA/HPCD(5% or 10%) eye drops) were used to investigate the effects for IOP in this study. An elevation in IOP was induced by the rapid infusion of 5% glucose solution (15 mL/kg of body weight) through the marginal ear vein or maintaining under dark phase for 5 h. In the both models, the induced elevation in IOP was prevented by the instillation of PGA/HPCD eye drops, and the IOP-reducing effect enhanced with increasing HPCD concentration in the drops. Nitric oxide (NO) levels elevated in the aqueous humor following the infusion of 5% glucose solution, and this increase was also suppressed by the instillation of PGA/HPCD eye drops. In conclusion, the present study demonstrates that the instillation of PGA/HPCD eye drops has an IOP-reducing effect in rabbits with experimentally induced ocular hypertension, probably as a result of the suppression of NO production.

Analysis of strong ground motions and site effects at Kantipath, Kathmandu, from 2015 Mw 7.8 Gorkha, Nepal, earthquake and its aftershocks

NASA Astrophysics Data System (ADS)

Dhakal, Yadab P.; Kubo, Hisahiko; Suzuki, Wataru; Kunugi, Takashi; Aoi, Shin; Fujiwara, Hiroyuki

2016-04-01

Strong ground motions from the 2015 Mw 7.8 Gorkha, Nepal, earthquake and its eight aftershocks recorded by a strong-motion seismograph at Kantipath (KATNP), Kathmandu, were analyzed to assess the ground-motion characteristics and site effects at this location. Remarkably large elastic pseudo-velocity responses exceeding 300 cm/s at 5 % critical damping were calculated for the horizontal components of the mainshock recordings at peak periods of 4-5 s. Conversely, the short-period ground motions of the mainshock were relatively weak despite the proximity of the site to the source fault. The horizontal components of all large-magnitude (Mw ≥ 6.3) aftershock recordings showed peak pseudo-velocity responses at periods of 3-4 s. Ground-motion prediction equations (GMPEs) describing the Nepal Himalaya region have not yet been developed. A comparison of the observational data with GMPEs for Japan showed that with the exception of the peak ground acceleration (PGA) of the mainshock, the observed PGAs and peak ground velocities at the KATNP site are generally well described by the GMPEs for crustal and plate interface events. A comparison of the horizontal-to-vertical ( H/ V) spectral ratios for the S-waves of the mainshock and aftershock recordings suggested that the KATNP site experienced a considerable nonlinear site response, which resulted in the reduced amplitudes of short-period ground motions. The GMPEs were found to underestimate the response values at the peak periods (approximately 4-5 s) of the large-magnitude events. The deep subsurface velocity model of the Kathmandu basin has not been well investigated. Therefore, a one-dimensional velocity model was constructed for the deep sediments beneath the recording station based on an analysis of the H/ V spectral ratios for S-wave coda from aftershock recordings, and it was revealed that the basin sediments strongly amplified the long-period components of the ground motions of the mainshock and large-magnitude aftershocks.

Effect of γ-PGA on the formation of collagen fibrils in vitro.

PubMed

Ding, Cuicui; Zheng, Zhigong; Liu, Xinzhong; Li, Hengda; Zhang, Min

2016-07-01

The effect of γ-poly(glutamic acid) (γ-PGA) on the self-assembly of collagen was studied. Under physiological conditions, the kinetic curves for fibril formation showed that the turbidity of collagen/γ-PGA blends at 313 nm was increased with the addition of γ-PGA. Furthermore, it was shown using both field-emission scanning electron microscopy (FESEM) and atomic force microscopy (AFM) that fibrils with a larger diameter were obtained following the addition of γ-PGA, probably due to the electrostatic and hydrogen bond interactions between collagen and γ-PGA, which promoted the lateral association of collagen molecules. In addition, both the thermal stability and viscoelastic properties of the hybrid hydrogels, which were evaluated by differential scanning calorimetry and rheological measurements, respectively, were improved by the addition of γ-PGA.

Poly(glycerol adipate) - indomethacin drug conjugates - synthesis and in vitro characterization.

PubMed

Wersig, T; Hacker, M C; Kressler, J; Mäder, K

2017-10-05

The linear biodegradable polyester poly(glycerol adipate) (PGA) was synthesized via enzymatic polycondensation using lipase B from Candida antarctica (CAL-B). Every monomer unit of PGA possesses a pendant hydroxyl group which is responsible for the hydrophilic character and moisture swelling. These OH groups were esterified to different degrees with the anti-inflammatory drug indomethacin in order to create a prodrug with a pH-sensitive linker for modified drug release. The structure of the conjugates was determined via ATR FT-IR spectroscopy, NMR spectroscopy, GPC and UV/VIS spectroscopy. The physical properties of polymers with different drug load were investigated using DSC, contact angle measurements and oscillatory rheology. Drug release was monitored over one month in vitro. A very slow, but continuous release was observed in PBS. Slightly acidic conditions and lipase activity are accelerating the indomethacin release. Therefore, poly(glycerol adipate) - indomethacin conjugates are promising prodrugs for the local sustained release of indomethacin. Copyright © 2017 Elsevier B.V. All rights reserved.

Genetic and metabolic engineering for microbial production of poly-γ-glutamic acid.

PubMed

Cao, Mingfeng; Feng, Jun; Sirisansaneeyakul, Sarote; Song, Cunjiang; Chisti, Yusuf

2018-05-28

Poly-γ-glutamic acid (γ-PGA) is a natural biopolymer of glutamic acid. The repeating units of γ-PGA may be derived exclusively from d-glutamic acid, or l-glutamic acid, or both. The monomer units are linked by amide bonds between the α-amino group and the γ-carboxylic acid group. γ-PGA is biodegradable, edible and water-soluble. It has numerous existing and emerging applications in processing of foods, medicines and cosmetics. This review focuses on microbial production of γ-PGA via genetically and metabolically engineered recombinant bacteria. Strategies for improving production of γ-PGA include modification of its biosynthesis pathway, enhancing the production of its precursor (glutamic acid), and preventing loss of the precursor to competing byproducts. These and other strategies are discussed. Heterologous synthesis of γ-PGA in industrial bacterial hosts that do not naturally produce γ-PGA is discussed. Emerging trends and the challenges affecting the production of γ-PGA are reviewed. Copyright © 2018. Published by Elsevier Inc.

Lack of the PGA exopolysaccharide in Salmonella as an adaptive trait for survival in the host

PubMed Central

Echeverz, Maite; García, Begoña; Sabalza, Amaia; Valle, Jaione; Lasa, Iñigo

2017-01-01

Many bacteria build biofilm matrices using a conserved exopolysaccharide named PGA or PNAG (poly-β-1,6-N-acetyl-D-glucosamine). Interestingly, while E. coli and other members of the family Enterobacteriaceae encode the pgaABCD operon responsible for PGA synthesis, Salmonella lacks it. The evolutionary force driving this difference remains to be determined. Here, we report that Salmonella lost the pgaABCD operon after the divergence of Salmonella and Citrobacter clades, and previous to the diversification of the currently sequenced Salmonella strains. Reconstitution of the PGA machinery endows Salmonella with the capacity to produce PGA in a cyclic dimeric GMP (c-di-GMP) dependent manner. Outside the host, the PGA polysaccharide does not seem to provide any significant benefit to Salmonella: resistance against chlorine treatment, ultraviolet light irradiation, heavy metal stress and phage infection remained the same as in a strain producing cellulose, the main biofilm exopolysaccharide naturally produced by Salmonella. In contrast, PGA production proved to be deleterious to Salmonella survival inside the host, since it increased susceptibility to bile salts and oxidative stress, and hindered the capacity of S. Enteritidis to survive inside macrophages and to colonize extraintestinal organs, including the gallbladder. Altogether, our observations indicate that PGA is an antivirulence factor whose loss may have been a necessary event during Salmonella speciation to permit survival inside the host. PMID:28542593

Tissue engineering of cartilage using a mechanobioreactor exerting simultaneous mechanical shear and compression to simulate the rolling action of articular joints.

PubMed

Shahin, Kifah; Doran, Pauline M

2012-04-01

The effect of dynamic mechanical shear and compression on the synthesis of human tissue-engineered cartilage was investigated using a mechanobioreactor capable of simulating the rolling action of articular joints in a mixed fluid environment. Human chondrocytes seeded into polyglycolic acid (PGA) mesh or PGA-alginate scaffolds were precultured in shaking T-flasks or recirculation perfusion bioreactors for 2.5 or 4 weeks prior to mechanical stimulation in the mechanobioreactor. Constructs were subjected to intermittent unconfined shear and compressive loading at a frequency of 0.05 Hz using a peak-to-peak compressive strain amplitude of 2.2% superimposed on a static axial compressive strain of 6.5%. The mechanical treatment was carried out for up to 2.5 weeks using a loading regime of 10 min duration each day with the direction of the shear forces reversed after 5 min and release of all loading at the end of the daily treatment period. Compared with shaking T-flasks and mechanobioreactor control cultures without loading, mechanical treatment improved the amount and quality of cartilage produced. On a per cell basis, synthesis of both major structural components of cartilage, glycosaminoglycan (GAG) and collagen type II, was enhanced substantially by up to 5.3- and 10-fold, respectively, depending on the scaffold type and seeding cell density. Levels of collagen type II as a percentage of total collagen were also increased after mechanical treatment by up to 3.4-fold in PGA constructs. Mechanical treatment had a less pronounced effect on the composition of constructs precultured in perfusion bioreactors compared with perfusion culture controls. This work demonstrates that the quality of tissue-engineered cartilage can be enhanced significantly by application of simultaneous dynamic mechanical shear and compression, with the greatest benefits evident for synthesis of collagen type II. Copyright © 2011 Wiley Periodicals, Inc.

Properties of starch-polyglutamic acid (PGA) graft copolymer prepared by microwave irradiation - Fourier transform infrared spectroscopy (FTIR) and rheology studies

USDA-ARS?s Scientific Manuscript database

The rheological properties of waxy starch-'-polygutamic acid (PGA) graft copolymers were investigated. Grafting was confirmed by FTIR spectroscopy. The starch-PGA copolymers absorbed water and formed gels, which exhibited concentration-dependent viscoelastic solid properties. Higher starch-PGA conce...

Lawrence Livermore National Laboratory Site Seismic Safety Program: Summary of Findings

DOE Office of Scientific and Technical Information (OSTI.GOV)

Savy, J B; Foxall, W

The Lawrence Livermore National Laboratory (LLNL) Site Seismic Safety Program was conceived in 1979 during the preparation of the site Draft Environmental Impact Statement. The impetus for the program came from the development of new methodologies and geologic data that affect assessments of geologic hazards at the LLNL site; it was designed to develop a new assessment of the seismic hazard to the LLNL site and LLNL employees. Secondarily, the program was also intended to provide the technical information needed to make ongoing decisions about design criteria for future construction at LLNL and about the adequacy of existing facilities. Thismore » assessment was intended to be of the highest technical quality and to make use of the most recent and accepted hazard assessment methodologies. The basic purposes and objectives of the current revision are similar to those of the previous studies. Although all the data and experience assembled in the previous studies were utilized to their fullest, the large quantity of new information and new methodologies led to the formation of a new team that includes LLNL staff and outside consultants from academia and private consulting firms. A peer-review panel composed of individuals from academia (A. Cornell, Stanford University), the Department of Energy (DOE; Jeff Kimball), and consulting (Kevin Coppersmith), provided review and guidance. This panel was involved from the beginning of the project in a ''participatory'' type of review. The Senior Seismic Hazard Analysis Committee (SSHAC, a committee sponsored by the U.S. Nuclear Regulatory Commission, DOE, and the Electric Power Research Institute) strongly recommends the use of participatory reviews, in which the reviewers follow the progress of a project from the beginning, rather than waiting until the end to provide comments (Budnitz et al., 1997). Following the requirements for probabilistic seismic hazard analysis (PSHA) stipulated in the DOE standard DOE-STD-1023-95, a special effort was made to identify and quantify all types of uncertainties. The final seismic hazard estimates were de-aggregated to determine the contribution of all the seismic sources as well as the relative contributions of potential future earthquakes in terms of their magnitudes and distances from the site. It was found that, in agreement with previous studies, the Greenville Fault system contributes the most to the estimate of the seismic hazard expressed in terms of the probability of exceedance of the peak ground acceleration (PGA) at the center of the LLNL site (i.e., at high frequencies). It is followed closely by the Calaveras and Corral Hollow faults. The Mount Diablo thrust and the Springtown and Livermore faults were not considered in the hazard calculations in the 1991 study. In this study they contributed together approximately as much as the Greenville fault. At lower frequencies, more distant faults such as the Hayward and San Andreas faults begin to appear as substantial contributors to the total hazard. The results of this revision are presented in Figures 1 and 2. Figure 1 shows the estimated mean hazard curve in terms of the annual probability of exceedance of the peak ground acceleration (average of the two horizontal orthogonal components) at the LLNL site, assuming that the local site conditions are similar to those of a generic soil. Figure 2 shows the results in terms of the uniform hazard spectra (pseudo-spectral accelerations for 5% damping) for five return periods. Although this latest revision is based on a completely independent and in many respects very different set of data and methodology from the previous one, it gives essentially the same results for the prediction of the peak ground acceleration (PGA), albeit with a reduced uncertainty. The Greenville fault being a dominant contributor to the hazard, a field investigation was performed to better characterize the probability distribution of the rate of slip on the fault. Samples were collected from a trench located on the northern segment of the Greenville fault, and are in the process of being dated at the LLNL Center for Acceleration Mass Spectrometry (CAMS) using carbon-14. Preliminary results from the dating corroborate the range of values used in the hazard calculations. A final update after completion and qualification (quality assurance) of the date measurements, in the near future, will finalize the distribution of this important parameter, probably using Bayesian updating.« less

Global catalog of earthquake rupture velocities shows anticorrelation between stress drop and rupture velocity

NASA Astrophysics Data System (ADS)

Chounet, Agnès; Vallée, Martin; Causse, Mathieu; Courboulex, Françoise

2018-05-01

Application of the SCARDEC method provides the apparent source time functions together with seismic moment, depth, and focal mechanism, for most of the recent earthquakes with magnitude larger than 5.6-6. Using this large dataset, we have developed a method to systematically invert for the rupture direction and average rupture velocity Vr, when unilateral rupture propagation dominates. The approach is applied to all the shallow (z < 120 km) earthquakes of the catalog over the 1992-2015 time period. After a careful validation process, rupture properties for a catalog of 96 earthquakes are obtained. The subsequent analysis of this catalog provides several insights about the seismic rupture process. We first report that up-dip ruptures are more abundant than down-dip ruptures for shallow subduction interface earthquakes, which can be understood as a consequence of the material contrast between the slab and the overriding crust. Rupture velocities, which are searched without any a-priori up to the maximal P wave velocity (6000-8000 m/s), are found between 1200 m/s and 4500 m/s. This observation indicates that no earthquakes propagate over long distances with rupture velocity approaching the P wave velocity. Among the 23 ruptures faster than 3100 m/s, we observe both documented supershear ruptures (e.g. the 2001 Kunlun earthquake), and undocumented ruptures that very likely include a supershear phase. We also find that the correlation of Vr with the source duration scaled to the seismic moment (Ts) is very weak. This directly implies that both Ts and Vr are anticorrelated with the stress drop Δσ. This result has implications for the assessment of the peak ground acceleration (PGA) variability. As shown by Causse and Song (2015), an anticorrelation between Δσ and Vr significantly reduces the predicted PGA variability, and brings it closer to the observed variability.

3-D Simulation of Earthquakes on the Cascadia Megathrust: Key Parameters and Constraints from Offshore Structure and Seismicity

NASA Astrophysics Data System (ADS)

Wirth, E. A.; Frankel, A. D.; Vidale, J. E.; Stone, I.; Nasser, M.; Stephenson, W. J.

2017-12-01

The Cascadia subduction zone has a long history of M8 to M9 earthquakes, inferred from coastal subsidence, tsunami records, and submarine landslides. These megathrust earthquakes occur mostly offshore, and an improved characterization of the megathrust is critical for accurate seismic hazard assessment in the Pacific Northwest. We run numerical simulations of 50 magnitude 9 earthquake rupture scenarios on the Cascadia megathrust, using a 3-D velocity model based on geologic constraints and regional seismicity, as well as active and passive source seismic studies. We identify key parameters that control the intensity of ground shaking and resulting seismic hazard. Variations in the down-dip limit of rupture (e.g., extending rupture to the top of the non-volcanic tremor zone, compared to a completely offshore rupture) result in a 2-3x difference in peak ground acceleration (PGA) for the inland city of Seattle, Washington. Comparisons of our simulations to paleoseismic data suggest that rupture extending to the 1 cm/yr locking contour (i.e., mostly offshore) provides the best fit to estimates of coastal subsidence during previous Cascadia earthquakes, but further constraints on the down-dip limit from microseismicity, offshore geodetics, and paleoseismic evidence are needed. Similarly, our simulations demonstrate that coastal communities experience a four-fold increase in PGA depending upon their proximity to strong-motion-generating areas (i.e., high strength asperities) on the deeper portions of the megathrust. An improved understanding of the structure and rheology of the plate interface and accretionary wedge, and better detection of offshore seismicity, may allow us to forecast locations of these asperities during a future Cascadia earthquake. In addition to these parameters, the seismic velocity and attenuation structure offshore also strongly affects the resulting ground shaking. This work outlines the range of plausible ground motions from an M9 Cascadia earthquake, and highlights the importance of offshore studies for constraining critical parameters and seismic hazard in the Pacific Northwest.

Seismic hazard estimation of northern Iran using smoothed seismicity

NASA Astrophysics Data System (ADS)

Khoshnevis, Naeem; Taborda, Ricardo; Azizzadeh-Roodpish, Shima; Cramer, Chris H.

2017-07-01

This article presents a seismic hazard assessment for northern Iran, where a smoothed seismicity approach has been used in combination with an updated seismic catalog and a ground motion prediction equation recently found to yield good fit with data. We evaluate the hazard over a geographical area including the seismic zones of Azerbaijan, the Alborz Mountain Range, and Kopeh-Dagh, as well as parts of other neighboring seismic zones that fall within our region of interest. In the chosen approach, seismic events are not assigned to specific faults but assumed to be potential seismogenic sources distributed within regular grid cells. After performing the corresponding magnitude conversions, we decluster both historical and instrumental seismicity catalogs to obtain earthquake rates based on the number of events within each cell, and smooth the results to account for the uncertainty in the spatial distribution of future earthquakes. Seismicity parameters are computed for each seismic zone separately, and for the entire region of interest as a single uniform seismotectonic region. In the analysis, we consider uncertainties in the ground motion prediction equation, the seismicity parameters, and combine the resulting models using a logic tree. The results are presented in terms of expected peak ground acceleration (PGA) maps and hazard curves at selected locations, considering exceedance probabilities of 2 and 10% in 50 years for rock site conditions. According to our results, the highest levels of hazard are observed west of the North Tabriz and east of the North Alborz faults, where expected PGA values are between about 0.5 and 1 g for 10 and 2% probability of exceedance in 50 years, respectively. We analyze our results in light of similar estimates available in the literature and offer our perspective on the differences observed. We find our results to be helpful in understanding seismic hazard for northern Iran, but recognize that additional efforts are necessary to obtain more robust estimates at specific areas of interest and different site conditions.

Seismological, geodetic, macroseismic and historical context of the 2016 Mw 6.7 Tamenglong (Manipur) India earthquake

NASA Astrophysics Data System (ADS)

Gahalaut, V. K.; Martin, Stacey S.; Srinagesh, D.; Kapil, S. L.; Suresh, G.; Saikia, Saurav; Kumar, Vikas; Dadhich, Harendra; Patel, Aqeel; Prajapati, Sanjay K.; Shukla, H. P.; Gautam, J. L.; Baidya, P. R.; Mandal, Saroj; Jain, Ashish

2016-10-01

The 2016 Mw 6.7 Tamenglong earthquake (in the state of Manipur in northeastern India) on 4 January 2016 at 04:35 Indian Standard Time (3 January, 23:05 UTC) was the strongest earthquake to strike Manipur since 1988. Using data from Indian stations, we constrain the hypocentral depth of the mainshock at 59 ± 3.8 km and determine a strike-slip mechanism with a moderate reverse component on a steeply dipping plane. Though coseismic offsets from GPS measurements from four nearby sites were inadequate to provide further constraints on the focal mechanism, they were consistent with the magnitude and hypocentral depth of the earthquake. The epicentre of the mainshock was located 15-km west of the Churachandpur Mao Fault (CMF) but it was unrelated to this structure and was instead a typical intra-slab earthquake within the Indian plate. A strong motion instrument at the Loktak Power Station (LOK), 56-km from the epicentre, recorded a peak ground acceleration (PGA) of 0.027g while a PGA of 0.103g was recorded at Shillong (SHL) at an epicentral distance of 111-km. We also present macroseismic observations from 461 locations in north-eastern India and the adjacent areas for this earthquake. The highest intensities ( 7 EMS) were observed in the Manipur Valley and in the hills to the west while shaking was perceptible as far as Delhi and Jaipur. Lastly, we present a catalogue of 333 felt earthquakes in Manipur from 1588 ± 1 CE to 1955 derived from the royal chronicle of the kings of Manipur known as the Cheitharon Kumpapa, discuss important historical earthquakes in the region, and also estimate intensity magnitudes for the 1852 (MI 6.5 ± 0.8), 1869 (MI 7.1 ± 0.7), 1880 (MI 6.3 ± 0.7) and 2016 (MI 6.8 ± 0.8) earthquakes.

Interaction and formation mechanism of binary complex between zein and propylene glycol alginate.

PubMed

Sun, Cuixia; Dai, Lei; Gao, Yanxiang

2017-02-10

The anti-solvent co-precipitation method was used to fabricate the zein-propylene glycol alginate (PGA) binary complex with different mass ratios of zein to PGA (20:1, 10:1, 5:1, 2:1 and 1:1) at pH 4.0. Results showed that attractive electrostatic interaction between zein and PGA occurred and negatively charged binary complex with large size and high turbidity was formed due to the charge neutralization. Hydrogen bonding and hydrophobic effects were involved in the interactions between zein and PGA, leading to the changed secondary structure and improved thermal stability of zein. Aggregates in the irregular shape with large size were obviously observed in the AFM images. PGA alone exhibited a fine filamentous network structure, while zein-PGA binary complex showed a rough branch-like pattern and the surface of "branch" was closely adsorbed by lots of spherical zein particles. Q in zein-PGA binary complex dispersions presented the improved photochemical and thermal stability. The potential mechanism of a two-step process was proposed to explain the formation of zein-PGA binary complexes. Copyright © 2016 Elsevier Ltd. All rights reserved.

Poly-γ-Glutamic Acids Contribute to Biofilm Formation and Plant Root Colonization in Selected Environmental Isolates of Bacillus subtilis

PubMed Central

Yu, Yiyang; Yan, Fang; Chen, Yun; Jin, Christopher; Guo, Jian-Hua; Chai, Yunrong

2016-01-01

Bacillus subtilis is long known to produce poly-γ-glutamic acids (γ-PGA) as one of the major secreted polymeric substances. In B. subtilis, the regulation of γ-PGA production and its physiological role are still unclear. B. subtilis is also capable of forming structurally complex multicellular communities, or biofilms, in which an extracellular matrix consisting of secreted proteins and polysaccharides holds individual cells together. Biofilms were shown to facilitate B. subtilis–plant interactions. In this study, we show that different environmental isolates of B. subtilis, all capable of forming biofilms, vary significantly in γ-PGA production. This is possibly due to differential regulation of γ-PGA biosynthesis genes. In many of those environmental isolates, γ-PGA seems to contribute to robustness and complex morphology of the colony biofilms, suggesting a role of γ-PGA in biofilm formation. Our evidence further shows that in selected B. subtilis strains, γ-PGA also plays a role in root colonization by the bacteria, pinpointing a possible function of γ-PGA in B. subtilis–plant interactions. Finally, we found that several pathways co-regulate both γ-PGA biosynthesis genes and genes for the biofilm matrix in B. subtilis, but in an opposing fashion. We discussed potential biological significance of that. PMID:27891125

Long-term change of site response after the M W 9.0 Tohoku earthquake in Japan

NASA Astrophysics Data System (ADS)

Wu, Chunquan; Peng, Zhigang

2012-12-01

The recent M W 9.0 off the Pacific coast of Tohoku earthquake is the largest recorded earthquake in Japan's history. The Tohoku main shock and its aftershocks generated widespread strong shakings as large as ~3000 Gal along the east coast of Japan. Wu and Peng (2011) found clear drop of resonant frequency of up to 70% during the Tohoku main shock at 6 sites and correlation of resonance (peak) frequency and peak ground acceleration (PGA) during the main shock. Here we follow that study and systematically analyze long-term changes of material properties in the shallow crust from one year before to 5 months after the Tohoku main shock, using seismic data recorded by the Japanese Strong Motion Network KiK-Net. We use sliding window spectral ratios computed from a pair of surface and borehole stations to track the temporal changes in the site response of 6 sites. Our results show two stages of logarithmic recovery after a sharp drop of resonance frequency during the Tohoku main shock. The first stage is a rapid recovery within several hundred seconds to several hours, and the second stage is a slow recovery of more than five months. We also investigate whether the damage caused by the Tohoku main shock could make the near surface layers more susceptible to further damages, but we do not observe clear changes in susceptibility to further damage before and after the Tohoku main shock.

Fault Structural Control on Earthquake Strong Ground Motions: The 2008 Wenchuan Earthquake as an Example

NASA Astrophysics Data System (ADS)

Zhang, Yan; Zhang, Dongli; Li, Xiaojun; Huang, Bei; Zheng, Wenjun; Wang, Yuejun

2018-02-01

Continental thrust faulting earthquakes pose severe threats to megacities across the world. Recent events show the possible control of fault structures on strong ground motions. The seismogenic structure of the 2008 Wenchuan earthquake is associated with high-angle listric reverse fault zones. Its peak ground accelerations (PGAs) show a prominent feature of fault zone amplification: the values within the 30- to 40-km-wide fault zone block are significantly larger than those on both the hanging wall and the footwall. The PGA values attenuate asymmetrically: they decay much more rapidly in the footwall than in the hanging wall. The hanging wall effects can be seen on both the vertical and horizontal components of the PGAs, with the former significantly more prominent than the latter. All these characteristics can be adequately interpreted by upward extrusion of the high-angle listric reverse fault zone block. Through comparison with a low-angle planar thrust fault associated with the 1999 Chi-Chi earthquake, we conclude that different fault structures might have controlled different patterns of strong ground motion, which should be taken into account in seismic design and construction.

Production of Poly-γ-Glutamate (PGA) Biopolymer by Batch and Semicontinuous Cultures of Immobilized Bacilluslicheniformis strain-R

PubMed Central

Berekaa, Mahmoud M.; El Aassar, Samy A.; El-Sayed, Samia M.; EL Borai, Aliaa M.

2009-01-01

Production of Polyglutamate (PGA) biopolymer by immobilized Bacillus licheniformis strain-R was intensively investigated. Preliminary experiments were carried out to address the most suitable immobilization methodology. Entrapment of Bacillus cells in alginate–agar led optimal PGA production (36.75 g/l), with 1.32-and 2.18-fold increase in comparison with alginate-or K-carrageenan-immobilized cells, respectively. During semicontinuous cultivation of agar-alginate gel-cell mixture, production of PGA by 10 ml mixture was increased from 2nd to 3rd run whereas, increased till the 4th run using 15ml mixture. Adsorption was the most suitable immobilization technique for production of PGA and the sponge cubes was the preferred matrix recording 43.2 g/l of PGA with the highest cell adsorption. Furthermore, no PGA was detected when B. licheniformis cells were adsorbed on wood and pumice. Although luffa pulp-adsorbed cells recorded the highest PGA production (50.4 g/l), cell adsorption was the lowest. Semicontinuous cultivation of B. licheniformis cells adsorbed on sponge led to increase of PGA production till the 3rd run and reached 55.5 g/l then slightly decreased in the 4th run. The successful use of fixed-bed bioreactor for semicontinuous cultivation of B. licheniformis cells held on sponge cubes (3 runs, 96 hours/run) provides insight for the potential biotechnological production of PGA by immobilized cells. PMID:24031418

Structural Basis for Translocation of a Biofilm-supporting Exopolysaccharide across the Bacterial Outer Membrane.

PubMed

Wang, Yan; Andole Pannuri, Archana; Ni, Dongchun; Zhou, Haizhen; Cao, Xiou; Lu, Xiaomei; Romeo, Tony; Huang, Yihua

2016-05-06

The partially de-N-acetylated poly-β-1,6-N-acetyl-d-glucosamine (dPNAG) polymer serves as an intercellular biofilm adhesin that plays an essential role for the development and maintenance of integrity of biofilms of diverse bacterial species. Translocation of dPNAG across the bacterial outer membrane is mediated by a tetratricopeptide repeat-containing outer membrane protein, PgaA. To understand the molecular basis of dPNAG translocation, we determined the crystal structure of the C-terminal transmembrane domain of PgaA (residues 513-807). The structure reveals that PgaA forms a 16-strand transmembrane β-barrel, closed by four loops on the extracellular surface. Half of the interior surface of the barrel that lies parallel to the translocation pathway is electronegative, suggesting that the corresponding negatively charged residues may assist the secretion of the positively charged dPNAG polymer. In vivo complementation assays in a pgaA deletion bacterial strain showed that a cluster of negatively charged residues proximal to the periplasm is necessary for biofilm formation. Biochemical analyses further revealed that the tetratricopeptide repeat domain of PgaA binds directly to the N-deacetylase PgaB and is critical for biofilm formation. Our studies support a model in which the positively charged PgaB-bound dPNAG polymer is delivered to PgaA through the PgaA-PgaB interaction and is further targeted to the β-barrel lumen of PgaA potentially via a charge complementarity mechanism, thus priming the translocation of dPNAG across the bacterial outer membrane. © 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Enhancing poly-γ-glutamic acid production in Bacillus amyloliquefaciens by introducing the glutamate synthesis features from Corynebacterium glutamicum.

PubMed

Feng, Jun; Quan, Yufen; Gu, Yanyan; Liu, Fenghong; Huang, Xiaozhong; Shen, Haosheng; Dang, Yulei; Cao, Mingfeng; Gao, Weixia; Lu, Xiaoyun; Wang, Yi; Song, Cunjiang; Wang, Shufang

2017-05-22

Poly-γ-glutamic acid (γ-PGA) is a valuable polymer with glutamate as its sole precursor. Enhancement of the intracellular glutamate synthesis is a very important strategy for the improvement of γ-PGA production, especially for those glutamate-independent γ-PGA producing strains. Corynebacterium glutamicum has long been used for industrial glutamate production and it exhibits some unique features for glutamate synthesis; therefore introduction of these metabolic characters into the γ-PGA producing strain might lead to increased intracellular glutamate availability, and thus ultimate γ-PGA production. In this study, the unique glutamate synthesis features from C. glutamicum was introduced into the glutamate-independent γ-PGA producing Bacillus amyloliquefaciens NK-1 strain. After introducing the energy-saving NADPH-dependent glutamate dehydrogenase (NADPH-GDH) pathway, the NK-1 (pHT315-gdh) strain showed slightly increase (by 9.1%) in γ-PGA production. Moreover, an optimized metabolic toggle switch for controlling the expression of ɑ-oxoglutarate dehydrogenase complex (ODHC) was introduced into the NK-1 strain, because it was previously shown that the ODHC in C. glutamicum was completely inhibited when glutamate was actively produced. The obtained NK-PO1 (pHT01-xylR) strain showed 66.2% higher γ-PGA production than the NK-1 strain. However, the further combination of these two strategies (introducing both NADPH-GDH pathway and the metabolic toggle switch) did not lead to further increase of γ-PGA production but rather the resultant γ-PGA production was even lower than that in the NK-1 strain. We proposed new metabolic engineering strategies to improve the γ-PGA production in B. amyloliquefaciens. The NK-1 (pHT315-gdh) strain with the introduction of NADPH-GDH pathway showed 9.1% improvement in γ-PGA production. The NK-PO1 (pHT01-xylR) strain with the introduction of a metabolic toggle switch for controlling the expression of ODHC showed 66.2% higher γ-PGA production than the NK-1 strain. This work proposed a new strategy for improving the target product in microbial cell factories.

Probabilistic seismic hazard maps for Sinai Peninsula, Egypt

NASA Astrophysics Data System (ADS)

Deif, A.; Abou Elenean, K.; El Hadidy, M.; Tealeb, A.; Mohamed, A.

2009-09-01

Sinai experienced the largest Egyptian earthquake with moment magnitude (Mw) 7.2 in 1995 in the Gulf of Aqaba, 350 km from Cairo. It is characterized by the presence of many tourist projects in addition to different natural resources. The aim of the current study is to present, for the first time, the probabilistic spectral hazard maps for Sinai. Revised earthquake catalogues for Sinai and its surroundings, from 112 BC to 2006 AD with magnitude equal or greater than 3.0, are used to calculate seismic hazard in the region of interest between 27°N and 31.5°N and 32°E and 36°E. We declustered these catalogues to include only independent events. The catalogues were tested for the completeness of different magnitude ranges. 28 seismic source zones are used to define the seismicity. The recurrence rates and the maximum earthquakes across these zones were also determined from these modified catalogues. Strong ground motion relations for rock are used to produce 5% damped spectral acceleration values for four different periods (0.2, 0.5, 1.0 and 2.0 s) to define the uniform response spectra at each site (grid of 0.2° × 0.2° all over the area). Maps showing spectral acceleration values at 0.2, 0.5, 1.0 and 2.0 s periods as well as peak ground acceleration (PGA) for the return period of 475 years (equivalent to 90% probability on non-exceedence in 50 years) are presented. In addition, Uniform Hazard Spectra (UHS) at 25 different periods for the four main cities (Hurghda, Sharm El-Sheikh, Nuweibaa and Suez) are graphed. The highest hazard is found in the Gulf of Aqaba with maximum spectral accelerations 356 cm s-2 at a period of 0.22 s for a return period of 475 years.

Seismic hazard assessment of the cultural heritage sites: A case study in Cappadocia (Turkey)

NASA Astrophysics Data System (ADS)

Seyrek, Evren; Orhan, Ahmet; Dinçer, İsmail

2014-05-01

Turkey is one of the most seismically active regions in the world. Major earthquakes with the potential of threatening life and property occur frequently here. In the last decade, over 50,000 residents lost their lives, commonly as a result of building failures in seismic events. The Cappadocia region is one of the most important touristic sites in Turkey. At the same time, the region has been included to the Word Heritage List by UNESCO at 1985 due to its natural, historical and cultural values. The region is undesirably affected by several environmental conditions, which are subjected in many previous studies. But, there are limited studies about the seismic evaluation of the region. Some of the important historical and cultural heritage sites are: Goreme Open Air Museum, Uchisar Castle, Ortahisar Castle, Derinkuyu Underground City and Ihlara Valley. According to seismic hazard zonation map published by the Ministry of Reconstruction and Settlement these heritage sites fall in Zone III, Zone IV and Zone V. This map show peak ground acceleration or 10 percent probability of exceedance in 50 years for bedrock. In this connection, seismic hazard assessment of these heritage sites has to be evaluated. In this study, seismic hazard calculations are performed both deterministic and probabilistic approaches with local site conditions. A catalog of historical and instrumental earthquakes is prepared and used in this study. The seismic sources have been identified for seismic hazard assessment based on geological, seismological and geophysical information. Peak Ground Acceleration (PGA) at bed rock level is calculated for different seismic sources using available attenuation relationship formula applicable to Turkey. The result of the present study reveals that the seismic hazard at these sites is closely matching with the Seismic Zonation map published by the Ministry of Reconstruction and Settlement. Keywords: Seismic Hazard Assessment, Probabilistic Approach, Deterministic Approach, Historical Heritage, Cappadocia.

Probabilistic Seismic Hazard Analysis for Georgia

NASA Astrophysics Data System (ADS)

Tsereteli, N. S.; Varazanashvili, O.; Sharia, T.; Arabidze, V.; Tibaldi, A.; Bonali, F. L. L.; Russo, E.; Pasquaré Mariotto, F.

2017-12-01

Nowadays, seismic hazard studies are developed in terms of the calculation of Peak Ground Acceleration (PGA), Spectral Acceleration (SA), Peak Ground Velocity (PGV) and other recorded parameters. In the frame of EMME project PSH were calculated for Georgia using GMPE based on selection criteria. In the frame of Project N 216758 (supported by Shota Rustaveli National Science Foundation (SRNF)) PSH maps were estimated using hybrid- empirical ground motion prediction equation developed for Georgia. Due to the paucity of seismically recorded information, in this work we focused our research on a more robust dataset related to macroseismic data,and attempted to calculate the probabilistic seismic hazard directly in terms of macroseismicintensity. For this reason, we started calculating new intensity prediction equations (IPEs)for Georgia taking into account different sets, belonging to the same new database, as well as distances from the seismic source.With respect to the seismic source, in order to improve the quality of the results, we have also hypothesized the size of faults from empirical relations, and calculated new IPEs also by considering Joyner-Boore and rupture distances in addition to epicentral and hypocentral distances. Finally, site conditions have been included as variables for IPEs calculation Regarding the database, we used a brand new revised set of macroseismic data and instrumental records for the significant earthquakes that struck Georgia between 1900 and 2002.Particularly, a large amount of research and documents related to macroseismic effects of individual earthquakes, stored in the archives of the Institute of Geophysics, were used as sources for the new macroseismic data. The latter are reported in the Medvedev-Sponheuer-Karnikmacroseismic scale (MSK64). For each earthquake the magnitude, the focal depth and the epicenter location are also reported. An online version of the database, with therelated metadata,has been produced for the 69 revised earthquakes and is available online (http://www.enguriproject.unimib.it/; .

Characterization of earthquake-induced ground motion from the L'Aquila seismic sequence of 2009, Italy

NASA Astrophysics Data System (ADS)

Malagnini, Luca; Akinci, Aybige; Mayeda, Kevin; Munafo', Irene; Herrmann, Robert B.; Mercuri, Alessia

2011-01-01

Based only on weak-motion data, we carried out a combined study on region-specific source scaling and crustal attenuation in the Central Apennines (Italy). Our goal was to obtain a reappraisal of the existing predictive relationships for the ground motion, and to test them against the strong-motion data [peak ground acceleration (PGA), peak ground velocity (PGV) and spectral acceleration (SA)] gathered during the Mw 6.15 L'Aquila earthquake (2009 April 6, 01:32 UTC). The L'Aquila main shock was not part of the predictive study, and the validation test was an extrapolation to one magnitude unit above the largest earthquake of the calibration data set. The regional attenuation was determined through a set of regressions on a data set of 12 777 high-quality, high-gain waveforms with excellent S/N ratios (4259 vertical and 8518 horizontal time histories). Seismograms were selected from the recordings of 170 foreshocks and aftershocks of the sequence (the complete set of all earthquakes with ML≥ 3.0, from 2008 October 1 to 2010 May 10). All waveforms were downloaded from the ISIDe web page (), a web site maintained by the Istituto Nazionale di Geofisica e Vulcanologia (INGV). Weak-motion data were used to obtain a moment tensor solution, as well as a coda-based moment-rate source spectrum, for each one of the 170 events of the L'Aquila sequence (2.8 ≤Mw≤ 6.15). Source spectra were used to verify the good agreement with the source scaling of the Colfiorito seismic sequence of 1997-1998 recently described by Malagnini (2008). Finally, results on source excitation and crustal attenuation were used to produce the absolute site terms for the 23 stations located within ˜80 km of the epicentral area. The complete set of spectral corrections (crustal attenuation and absolute site effects) was used to implement a fast and accurate tool for the automatic computation of moment magnitudes in the Central Apennines.

Effects of MreB paralogs on poly-γ-glutamic acid synthesis and cell morphology in Bacillus amyloliquefaciens.

PubMed

Gao, Weixia; Zhang, Zhongxiong; Feng, Jun; Dang, Yulei; Quan, Yufen; Gu, Yanyan; Wang, Shufang; Song, Cunjiang

2016-09-01

Actin-like MreB paralogs play important roles in cell shape maintenance, cell wall synthesis and the regulation of the D,L-endopeptidases, CwlO and LytE. The gram-positive bacteria, Bacillus amyloliquefaciens LL3, is a poly-γ-glutamic acid (γ-PGA) producing strain that contains three MreB paralogs: MreB, Mbl and MreBH. In B. amyloliquefaciens, CwlO and LytE can degrade γ-PGA. In this study, we aimed to test the hypothesis that modulating transcript levels of MreB paralogs would alter the synthesis and degradation of γ-PGA. The results showed that overexpression or inhibition of MreB, Mbl or MreBH had distinct effects on cell morphology and the molecular weight of the γ-PGA products. In fermentation medium, cells of mreB inhibition mutant were 50.2% longer than LL3, and the γ-PGA titer increased by 55.7%. However, changing the expression level of mbl showed only slight effects on the morphology, γ-PGA molecular weight and titer. In the mreBH inhibition mutant, γ-PGA production and its molecular weight increased by 56.7% and 19.4%, respectively. These results confirmed our hypothesis that suppressing the expression of MreB paralogs might reduce γ-PGA degradation, and that improving the cell size could strengthen γ-PGA synthesis. This is the first report of enhanced γ-PGA production via suppression of actin-like MreB paralogs. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Poly(γ-glutamic acid) and poly(γ-glutamic acid)-based nanocomplexes enhance type II collagen production in intervertebral disc.

PubMed

Antunes, Joana C; Pereira, Catarina Leite; Teixeira, Graciosa Q; Silva, Ricardo V; Caldeira, Joana; Grad, Sibylle; Gonçalves, Raquel M; Barbosa, Mário A

2017-01-01

Intervertebral disc (IVD) degeneration often leads to low back pain, which is one of the major causes of disability worldwide, affecting more than 80% of the population. Although available treatments for degenerated IVD decrease symptoms' progression, they fail to address the underlying causes and to restore native IVD properties. Poly(γ-glutamic acid) (γ-PGA) has recently been shown to support the production of chondrogenic matrix by mesenchymal stem/stromal cells. γ-PGA/chitosan (Ch) nanocomplexes (NCs) have been proposed for several biomedical applications, showing advantages compared with either polymer alone. Hence, this study explores the potential of γ-PGA and γ-PGA/Ch NCs for IVD regeneration. Nucleotomised bovine IVDs were cultured ex vivo upon injection of γ-PGA (pH 7.4) and γ-PGA/Ch NCs (pH 5.0 and pH 7.4). Tissue metabolic activity and nucleus pulposus DNA content were significantly reduced when NCs were injected in acidic-buffered solution (pH 5.0). However, at pH 7.4, both γ-PGA and NCs promoted sulphated glycosaminoglycan production and significant type II collagen synthesis, as determined at the protein level. This study is a first proof of concept that γ-PGA and γ-PGA/Ch NCs promote recovery of IVD native matrix, opening new perspectives on the development of alternative therapeutic approaches for IVD degeneration.

Epoxy-functionalized mesostructured cellular foams as effective support for covalent immobilization of penicillin G acylase

NASA Astrophysics Data System (ADS)

Xue, Ping; Xu, Fang; Xu, Lidong

2008-12-01

The epoxy-functionalized mesoporous cellular foams (G-MCFs) with high specific surface area (˜400 m 2/g) and large-size mesopores (˜17 nm) were obtained by condensation of 3-glycidoxypropyltriethoxysilane (GPTS) and the surface silanol groups of mesoporous cellular foams (MCFs) and used as the support for immobilization of penicillin G acylase (PGA). The structural properties of G-MCF were characterized by FT-IR, N 2 adsorption, TG-DTA and 29Si MAS NMR. The studies indicated that the glycidoxypropyl groups were chemically bonded to the silicon atoms on the surface of MCF. The epoxy-functionalized mesoporous cellular foams can provide the microenvironments suitable for the immobilization of PGA, and the enzyme molecules could be immobilized covalently onto the G-MCF under mild conditions by reaction between the amino groups of the enzyme molecules and the epoxy groups on the surface of G-MCF. The PGA immobilized on G-MCF (PGA/G-MCF) exhibited the apparent activity of 1782 IU/g and 46.6% of activity recovery for hydrolyzing penicillin G potassium to produce 6-aminopenicillanic acid at 37 °C which were higher than that of PGA on pure silica MCF (1521 IU/g and 39.8%, respectively). The kinetic study also indicated that PGA immobilized on G-MCF has a Km of 2.1 × 10 -2 mol/L lower than that of PGA immobilized on the pure silica MCF (5.0 × 10 -2 mol/L). These may be attributed to the enhanced surface affinity between G-MCF support and the substrate molecules. Due to the covalent immobilization of PGA molecules on the surface of G-MCF, the immobilized PGA with considerable operational stability was achieved. The activity of PGA/G-MCF is still about 91.4% of its initial activity at the 10th cycle reuse while that of PGA/MCF only remains 41.5% of its initial activity at the same reuse numbers. In addition, the investigation results show the thermal stability and durability on acid or basic medium of PGA immobilized on G-MCF were improved remarkably.

Pyroglutamic acid promotes survival of retinal ganglion cells after optic nerve injury.

PubMed

Oono, Shinichirou; Kurimoto, Takuji; Nakazawa, Toru; Miyoshi, Tomomitsu; Okamoto, Norio; Kashimoto, Ryosuke; Tagami, Yuichi; Ito, Yoshimasa; Mimura, Osamu

2009-07-01

To determine whether pyroglutamic acid (PGA) enhances the survival of retinal ganglion cells (RGCs) after optic nerve (ON) transection in vivo and RGCs in culture. The RGCs of rats were retrogradely labeled by Fluorogold (FG)-soaked sponges placed on both superior colliculi. Seven days later, the ON was transected, and PGA was immediately injected into the vitreous. Seven or fourteen days later, the number of FG-labeled RGCs was counted on flat-mounted retinas to obtain the mean densities of FG-labeled RGCs. To determine whether the survival effect of PGA was related to excitatory amino acid transporter (EAAT), L-trans-pyrrolidine-2,4 dicarboxylate (PDC), a nonselective glutamate transport inhibitor, was injected into vitreous with the PGA. In primary retinal cultures, RGCs were identified as cells that were immunopositive to beta III tubulin three days after beginning the culture with and without PDC. The mean density of FG-labeled RGCs was reduced from 2249 +/- 210 to 920 +/- 202 cells/mm(2) (p < 0.001) on day 7 after the ON transection. The mean density RGCs was significantly higher at 1213 +/- 159 cells/mm(2) after 0.5% PGA injection immediately after the ON transaction than eyes injected with the vehicle at 1007 +/- 122 cells/mm(2) (p = 0.035). One percent PGA was the most effective concentration for survival-promoting effects on RGCs, and the mean density of the RGCs was 1464 +/- 102/mm(2) (p < 0.001). Fourteen days after 1% PGA, the mean density of FG-labeled RGCs was significantly higher than that with vehicle (204 +/- 23/mm(2) versus 145 +/- 17 cells/mm(2); p < 0.01). Simultaneous application of 1% PGA and PDC blocked the survival effects of PGA on day 7 after ON transection. The presence of PGA increased the number of beta III tubulin-positive cells. PGA promotes the survival of axotomized RGCs in adult mammalian retinas possibly mediated by the EAATs.

Late-onset anaphylaxis due to poly (γ-glutamic acid) in the soup of commercial cold Chinese noodles in a patient with allergy to fermented soybeans (natto).

PubMed

Inomata, Naoko; Chin, Keishi; Nagashima, Mayumi; Ikezawa, Zenro

2011-09-01

Fermented soybeans (natto) have been reported to induce IgE-mediated, late-onset anaphylaxis without early-phase responses. However, the relevant allergens of natto allergy have never been identified. A 38-year-old man developed an anaphylactic reaction accompanied by flashing, generalized urticaria, conjunctival redness, and dyspnea 3 hours after ingestion of commercial cold Chinese noodles. He had avoided natto for the past year due to developing several anaphylactic reactions half a day after natto ingestion. The results of skin prick tests (SPTs) were strongly positive for natto and the soup of cold Chinese noodles. Furthermore, SPTs showed positive for poly (γ-glutamic acid) (PGA), which is a major constituent of natto mucilage, alone among all the ingredients of the cold Chinese noodle soup. Therefore, he was diagnosed with late-onset anaphylaxis to PGA contained in natto and the cold Chinese noodle soup. These results indicated that in the present case, the relevant allergen of late-onset anaphylaxis may have been PGA in all episodes and that the patient had been sensitized by PGA through natto ingestion. PGA is produced by Bacillus subtilis during fermentation and is a high-molecular, biodegradable polymer. The late onset is therefore, hypothesized to be due to a delayed absorption of PGA, as PGA biodegrades to peptides sufficiently small to be absorbed in the bowel. PGA has recently been applied to a wide range of fields such as foods, cosmetics, and medicine. Therefore, patients with late-onset anaphylaxis to PGA of natto should avoid not only natto but also other materials containing PGA.

Construct validity of the modified numeric rating scale of patient global assessment in psoriatic arthritis.

PubMed

Leung, Ying-Ying; Ho, Kwok-Wah; Zhu, Tracy-Yanner; Tam, Lai-Shan; Kun, Emily Wailin; Li, Edmund Kwok-Ming

2012-04-01

The construct validity of the patient global health assessment (PGA) in psoriatic arthritis (PsA) has not been analyzed, despite its common use. We evaluated the construct validity of a numeric rating scale (NRS) of the PGA in PsA. Patients with PsA who fulfilled the ClASsification for Psoriatic ARthritis (CASPAR) criteria were recruited at a tertiary referral center. Demographic data were collected and PGA data were determined from administration of an 11-point NRS (0 to 10 points representing best to worst status). Convergent and discriminant validity were evaluated by correlation between PGA and clinical variables. Patients were grouped as having severe disease based on Disease Activity Score 28-joint count (DAS28) > 5.1, Health Assessment Questionnaire (HAQ) > 1.0, walking with aids, and social welfare-dependent. Patients were grouped as being in remission by DAS28 < 2.6 and the Minimal Disease Activity Criteria. Known-group validity of PGA was evaluated. A total of 125 patients (52% men) were studied. Convergent validity revealed strong correlations of PGA with pain score, HAQ, and DAS28; and weak correlations with skin severity score, physician's global assessment and morning stiffness. In multivariate analysis, PGA was associated with pain, physical function, mental function, and skin severity score. PGA distinguished different levels of severity well, as determined by comparison with different known groups with large effect sizes. Judged on an NRS, the PGA had good construct validity and satisfactorily distinguished all levels of severity in PsA.

Psychological state is related to the remission of the Boolean-based definition of patient global assessment in patients with rheumatoid arthritis.

PubMed

Fusama, Mie; Miura, Yasushi; Yukioka, Kumiko; Kuroiwa, Takanori; Yukioka, Chikako; Inoue, Miyako; Nakanishi, Tae; Murata, Norikazu; Takai, Noriko; Higashi, Kayoko; Kuritani, Taro; Maeda, Keiji; Sano, Hajime; Yukioka, Masao; Nakahara, Hideko

2015-09-01

To evaluate whether the psychological state is related to the Boolean-based definition of patient global assessment (PGA) remission in patients with rheumatoid arthritis (RA). Patients with RA who met the criteria of swollen joint count (SJC) ≤ 1, tender joint count (TJC) ≤ 1 and C-reactive protein (CRP) ≤ 1 were divided into two groups, PGA remission group (PGA ≤ 1 cm) and non-remission group (PGA > 1 cm). Anxiety was evaluated utilizing the Hospital Anxiety and Depression Scale-Anxiety (HADS-A), while depression was evaluated with HADS-Depression (HADS-D) and the Center for Epidemiologic Studies Depression Scale (CES-D). Comparison analyses were done between the PGA remission and non-remission groups in HADS-A, HADS-D and CES-D. Seventy-eight patients met the criteria for SJC ≤ 1, TJC ≤ 1 and CRP ≤ 1. There were no significant differences between the PGA remission group (n = 45) and the non-remission group (n = 33) in age, sex, disease duration and Steinbrocker's class and stage. HADS-A, HADS-D and CES-D scores were significantly lower in the PGA remission group. Patients with RA who did not meet the PGA remission criteria despite good disease condition were in a poorer psychological state than those who satisfied the Boolean-based definition of clinical remission. Psychological support might be effective for improvement of PGA, resulting in the attainment of true remission.

Coseismic landsliding associated with the 2015 April 25th Gorkha earthquake, Nepal

NASA Astrophysics Data System (ADS)

Clark, Marin; Zekkos, Dimitrios; West, A. Joshua; Gallen, Sean; Roback, Kevin; Chamlagain, Deepak; Athanasopoulos-Zekkos, Adda; Greenwood, William; Bateman, Julie; Partenio, Michael; Li, Gen; Cook, Kristen; Godt, Jonathan; Howat, Ian; Morin, Paul

2016-04-01

The characteristics of earthquake-triggered landslides have the potential to inform us about the ground motions during large earthquakes and the rock properties of the near surface environment. From the recent Mw7.8 2015 Gorkha earthquake in Nepal, we use satellite imagery to identify over 20,000 landslides that are associated with the main shock. While most landslides are located on steep hillslopes, we also present field measurements of alluvial terraces that have either failed or remained stable during the earthquake. We show how both hillslope and terrace failures can be used to better understand the earthquake. These local, site-specific surveys and analyses of alluvial terraces can be used to constrain co-seismic peak ground acceleration (PGA) and large landslide inventories can be used to gain insight into regional patterns of strong ground motion. Our regional landslide mapping reveals two principal patterns: (1) landslides are concentrated in the steep Greater Himalaya in the north, with conspicuously fewer landslides in the moderately-steep Lesser Himalaya in the south, and (2) within the Greater Himalaya, landslide density increases from west to east across the rupture area. We have compared our observed map of landslide occurrence to predictions from forward models using hillslope angles, average rock strength, and PGA estimated from ground motion prediction equations (GMPE). The higher concentration of landslides in the Greater Himalaya compared to the Lesser Himalaya can be predicted by the models and explained by the steeper topography of the Greater Himalaya. However, these forward models do not reproduce the east to west variation in observed landslide density, which is lower than model predictions near the epicenter, and greater than model predictions toward the eastern limit of the rupture. From limit equilibrium stability analysis of both failed and stable fluvial terraces, we constrain local PGA values in the eastern region of dense landsliding. We estimate higher PGA values than those predicted based on GMPE, which could in part explain the concentration of hillslope landsliding. An additional effect that may explain higher landslide density may be the concentration of high-frequency seismic energy, which is observed from high-rate GPS and teleseismic back-projections, since high-frequency spectra promote slope failure. Spatial variability in rock strength could also influence regional landslide distributions; this factor will be investigated with future shallow seismic and field observations. If the observed rupture characteristics of the Gorkha earthquake are typical of large earthquakes in the Himalaya, concentrated landsliding could locally deliver coarse sediment to river channels. Over the long term, spatially focused delivery of coarse sediment may lead to steepened river gradients and higher erosion rates that vary along strike of the Himalaya, provided that coseismic sediment production is mobilized and transported efficiently during the interseismic period. Ongoing work includes evaluating river sediment grain size. If a spatial correlation between coseismic landsliding, increased sediment grain size, and elevated erosion rates can be shown, it would demonstrate a new example of tectonic-erosion coupling based on the seismic cycle and fault behavior.

Preparation, Characterization and Properties of Alginate/Poly(γ-glutamic acid) Composite Microparticles

PubMed Central

Tong, Zongrui; Chen, Yu; Liu, Yang; Tong, Li; Chu, Jiamian; Xiao, Kecen; Zhou, Zhiyu; Dong, Wenbo; Chu, Xingwu

2017-01-01

Alginate (Alg) is a renewable polymer with excellent hemostatic properties and biocapability and is widely used for hemostatic wound dressing. However, the swelling properties of alginate-based wound dressings need to be promoted to meet the requirements of wider application. Poly(γ-glutamic acid) (PGA) is a natural polymer with high hydrophility. In the current study, novel Alg/PGA composite microparticles with double network structure were prepared by the emulsification/internal gelation method. It was found from the structure characterization that a double network structure was formed in the composite microparticles due to the ion chelation interaction between Ca2+ and the carboxylate groups of Alg and PGA and the electrostatic interaction between the secondary amine group of PGA and the carboxylate groups of Alg and PGA. The swelling behavior of the composite microparticles was significantly improved due to the high hydrophility of PGA. Influences of the preparing conditions on the swelling behavior of the composites were investigated. The porous microparticles could be formed while compositing of PGA. Thermal stability was studied by thermogravimetric analysis method. Moreover, in vitro cytocompatibility test of microparticles exhibited good biocompatibility with L929 cells. All results indicated that such Alg/PGA composite microparticles are a promising candidate in the field of wound dressing for hemostasis or rapid removal of exudates. PMID:28398222

Preparation, Characterization and Properties of Alginate/Poly(γ-glutamic acid) Composite Microparticles.

PubMed

Tong, Zongrui; Chen, Yu; Liu, Yang; Tong, Li; Chu, Jiamian; Xiao, Kecen; Zhou, Zhiyu; Dong, Wenbo; Chu, Xingwu

2017-04-11

Alginate (Alg) is a renewable polymer with excellent hemostatic properties and biocapability and is widely used for hemostatic wound dressing. However, the swelling properties of alginate-based wound dressings need to be promoted to meet the requirements of wider application. Poly( γ -glutamic acid) (PGA) is a natural polymer with high hydrophility. In the current study, novel Alg/PGA composite microparticles with double network structure were prepared by the emulsification/internal gelation method. It was found from the structure characterization that a double network structure was formed in the composite microparticles due to the ion chelation interaction between Ca 2+ and the carboxylate groups of Alg and PGA and the electrostatic interaction between the secondary amine group of PGA and the carboxylate groups of Alg and PGA. The swelling behavior of the composite microparticles was significantly improved due to the high hydrophility of PGA. Influences of the preparing conditions on the swelling behavior of the composites were investigated. The porous microparticles could be formed while compositing of PGA. Thermal stability was studied by thermogravimetric analysis method. Moreover, in vitro cytocompatibility test of microparticles exhibited good biocompatibility with L929 cells. All results indicated that such Alg/PGA composite microparticles are a promising candidate in the field of wound dressing for hemostasis or rapid removal of exudates.

The pgaABCD Locus of Escherichia coli Promotes the Synthesis of a Polysaccharide Adhesin Required for Biofilm Formation

PubMed Central

Wang, Xin; Preston, James F.; Romeo, Tony

2004-01-01

Production of a polysaccharide matrix is a hallmark of bacterial biofilms, but the composition of matrix polysaccharides and their functions are not widely understood. Previous studies of the regulation of Escherichia coli biofilm formation suggested the involvement of an unknown adhesin. We now establish that the pgaABCD (formerly ycdSRQP) locus affects biofilm development by promoting abiotic surface binding and intercellular adhesion. All of the pga genes are required for optimal biofilm formation under a variety of growth conditions. A pga-dependent cell-bound polysaccharide was isolated and determined by nuclear magnetic resonance analyses to consist of unbranched β-1,6-N-acetyl-d-glucosamine, a polymer previously unknown from the gram-negative bacteria but involved in adhesion by staphylococci. The pga genes are predicted to encode envelope proteins involved in synthesis, translocation, and possibly surface docking of this polysaccharide. As predicted, if poly-β-1,6-GlcNAc (PGA) mediates cohesion, metaperiodate caused biofilm dispersal and the release of intact cells, whereas treatment with protease or other lytic enzymes had no effect. The pgaABCD operon exhibits features of a horizontally transferred locus and is present in a variety of eubacteria. Therefore, we propose that PGA serves as an adhesin that stabilizes biofilms of E. coli and other bacteria. PMID:15090514

Synthesis of amphiphilic alternating polyesters with oligo(ethylene glycol) side chains and potential use for sustained release drug delivery.

PubMed

Wang, Wei; Ding, Jianxun; Xiao, Chunsheng; Tang, Zhaohui; Li, Di; Chen, Jie; Zhuang, Xiuli; Chen, Xuesi

2011-07-11

Novel amphiphilic alternating polyesters, poly((N-phthaloyl-l-glutamic anhydride)-co-(2-(2-(2-methoxyethoxy)ethoxy)methyl)oxirane) (P(PGA-co-ME(2)MO)), were synthesized by alternating copolymerization of PGA and ME(2)MO. The structures of the synthesized polyesters were characterized by (1)H NMR, (13)C NMR, FT-IR, and GPC analyses. Because of the presence of oligo(ethylene glycol) (OEG) side chains, the polyesters could self-assemble into thermosensitive micelles. Dynamic light scattering (DLS) showed that these micelles underwent thermoinduced size decrease without intermicellar aggregation. In vitro methyl thiazolyl tetrazolium (MTT) assay demonstrated that the polyesters were biocompatible to Henrietta Lacks (HeLa) cells, rendering their potential for drug delivery applications. Two hydrophobic drugs, rifampin and doxorubicin (DOX), were loaded into the polyester micelles and observed to be released in a zero-order sustained manner. The sustained release could be accelerated in lower pH or in the presence of proteinase K, due to the degradation of the polyester under these conditions. Remarkably, in vitro cell experiments showed that the polyester micelles accomplished fast release of DOX inside cells and higher anticancer efficacy as compared with the free DOX. With enhanced stability during circulation condition and accelerated drug release at the target sites (e.g., low pH or enzyme presence), these novel polyesters with amphiphilic structures are promising to be used in sustained release drug delivery systems.

Damage assessment of RC buildings subjected to the different strong motion duration

NASA Astrophysics Data System (ADS)

Mortezaei, Alireza; mohajer Tabrizi, Mohsen

2015-07-01

An earthquake has three important characteristics; namely, amplitude, frequency content and duration. Amplitude and frequency content have a direct impact but not necessarily the sole cause of structural damage. Regarding the duration, some researchers show a high correlation between strong motion duration and structural damage whereas some others find no relation. This paper focuses on the ground motion durations characterized by Arias Intensity (AI). High duration may increase the damage state of structure for the damage accumulation. This paper investigates the response time histories (acceleration, velocity and displacement) of RC buildings under the different strong motion durations. Generally, eight earthquake records were selected from different soil type, and these records were grouped according to their PGA and frequency ranges. Maximum plastic rotation and drift response was chosen as damage indicator. In general, there was a positive correlation between strong motion duration and damage; however, in some PGA and frequency ranges input motions with shorter durations might cause more damage than the input motions with longer durations. In soft soils, input motions with longer durations caused more damage than the input motions with shorter durations.

In vivo hair growth promotion effects of ultra-high molecular weight poly-γ-glutamic acid from Bacillus subtilis (Chungkookjang).

PubMed

Choi, Jae-Chul; Uyama, Hiroshi; Lee, Chul-Hoon; Sung, Moon-Hee

2015-03-01

We investigated the effect of ultra-high molecular weight poly-γ-glutamic acid (UHMW γ-PGA) on hair loss in vitro and in vivo. 5-Alpha reductase is an enzyme that metabolizes the male hormone testosterone into dihydrotestosterone. By performing an in vitro experiment to analyze the inhibitory effects of UHMW γ-PGA on 5-alpha reductase activity, we determined that UHMW γ-PGA did in fact inhibit 5-alpha reductase activity, indicating the use of UHMW γ-PGA as a potential 5-alpha reductase inhibitor in the treatment of men with androgenetic alopecia. To evaluate the promotion of hair growth in vivo, we topically applied UHMW γ-PGA and minoxidil on the shaved dorsal skin of telogenic C57BL/6 mice for 4 weeks. At 4 weeks, the groups treated with UHMW γ-PGA showed hair growth on more than 50% of the shaved skin, whereas the control group showed less hair growth. To investigate the progression of hair follicles in the hair cycle, hematoxylin and eosin staining was performed. Histological observations revealed that the appearance of hair follicles was earlier in the UHMW γ-PGA-treated group than in the control group. The number of hair follicles on the relative area of shaved skin in the UHMW γ-PGA-treated group was higher than that observed on the shaved skin in the control group. These results indicate that UHMW γ-PGA can promote hair growth by effectively inducing the anagen phase in telogenic C57BL/6 mice.

Proteomic analysis of the signaling pathway mediated by the heterotrimeric Gα protein Pga1 of Penicillium chrysogenum.

PubMed

Carrasco-Navarro, Ulises; Vera-Estrella, Rosario; Barkla, Bronwyn J; Zúñiga-León, Eduardo; Reyes-Vivas, Horacio; Fernández, Francisco J; Fierro, Francisco

2016-10-06

The heterotrimeric Gα protein Pga1-mediated signaling pathway regulates the entire developmental program in Penicillium chrysogenum, from spore germination to the formation of conidia. In addition it participates in the regulation of penicillin biosynthesis. We aimed to advance the understanding of this key signaling pathway using a proteomics approach, a powerful tool to identify effectors participating in signal transduction pathways. Penicillium chrysogenum mutants with different levels of activity of the Pga1-mediated signaling pathway were used to perform comparative proteomic analyses by 2D-DIGE and LC-MS/MS. Thirty proteins were identified which showed differences in abundance dependent on Pga1 activity level. By modifying the intracellular levels of cAMP we could establish cAMP-dependent and cAMP-independent pathways in Pga1-mediated signaling. Pga1 was shown to regulate abundance of enzymes in primary metabolic pathways involved in ATP, NADPH and cysteine biosynthesis, compounds that are needed for high levels of penicillin production. An in vivo phosphorylated protein containing a pleckstrin homology domain was identified; this protein is a candidate for signal transduction activity. Proteins with possible roles in purine metabolism, protein folding, stress response and morphogenesis were also identified whose abundance was regulated by Pga1 signaling. Thirty proteins whose abundance was regulated by the Pga1-mediated signaling pathway were identified. These proteins are involved in primary metabolism, stress response, development and signal transduction. A model describing the pathways through which Pga1 signaling regulates different cellular processes is proposed.

Effect of Hydrophobic Side Chains in the Induction of Immune Responses by Nanoparticle Adjuvants Consisting of Amphiphilic Poly(γ-glutamic acid).

PubMed

Shima, Fumiaki; Akagi, Takami; Akashi, Mitsuru

2015-05-20

The new generation vaccines are safe but poorly immunogenic, and thus they require the use of adjuvants. Adjuvants that can control the balance and induction level of cellular and humoral immunities are urgently required for the treatment of and/or protection from infectious diseases and cancers. However, there are no adjuvants which can achieve these requirements. In this study, amphiphilic poly(γ-glutamic acid) (γ-PGA) with various kinds of hydrophobic amino acid ethyl esters (AAE) was synthesized (γ-PGA-AAE) and used to prepare antigen-encapsulated nanoparticles (NPs). γ-PGA-graft-Leu (γ-PGA-Leu, where Leu = leucine ethyl ester), γ-PGA-graft-Phe (γ-PGA-Phe, where Phe = phenylalanine ethyl ester), and γ-PGA-graft-Trp (γ-PGA-Trp, where Trp = tryptophan ethyl ester) formed monodispersed NPs that encapsulated ovalbumin (OVA). The type and the induction level of the antigen-specific cellular and humoral immunities could be controlled by the kinds of hydrophobic segments and vaccine formulation (encapsulation or mixture) used. When OVA was encapsulated into NPs, the cellular immunity was dominantly induced, while humoral immunity was dominant when OVA was mixed with NPs. These results are a first report to demonstrate that the balance and induction level of cellular and humoral immunities could be controlled by modifying compositions of NPs and vaccine formulation. Our results suggest that γ-PGA-AAE NPs can provide safe and efficient nanoparticle-based vaccine adjuvants, and the results also provide guidelines in the rational design of amphiphilic polymers as vaccine adjuvants which can control the balance of immune responses.

Influence of the Saros Fault on the Periodicity of Earthquake Activity (Gelibolu Peninsula, NW Turkey)

NASA Astrophysics Data System (ADS)

İpek Gültekin, Derya; Karakoç, Okan; Şahin, Murat; Elitez, İrem; Yaltırak, Cenk

2017-04-01

Active faults are vital in terms of settlement and socio-economic aspects of a region. For this reason, it is important to determine the characteristics and impact areas of active faults correctly. The Marmara region is a tectonically active region located in the northwestern Anatolia. The northern part of the North Anatolian Fault, which was named the Saros Fault, passes through the westernmost part of this region. The Saros Fault is a 52 km-long and NE-SW-trending right-lateral strike-slip fault. In this study, the seismicity of the Gelibolu Peninsula has been examined in the light of historical records. When considering the historical records, 545, 986, 1354 and 1756 earthquakes led to damage on the settlements close to the Saros Fault. The dates of historical earthquakes were calculated by integration of previously published empirical formulas, year difference between events and velocity of GPS vectors. The acceleration map (PGA MAPS) of the region has been produced by taking into account these earthquake magnitudes, fault geometry and geology of the region, and consequently, it was seen that these maps overlap quite well with the damage records of historical earthquakes. Considering the periodicity of the Saros Fault, which majorly controls the seismicity in the region, it is aimed to find an answer to the question "how does a recent earthquake affect the region?" by the help of historical earthquake records and PGA modelling. In conclusion, our data showed that PGA values are dominant in the northern side of the Gelibolu Peninsula and this region may be affected by a magnitude 7.3 earthquake.

Enhanced ultraviolet photoconductivity in porous GaN prepared by metal-assisted electroless etching

NASA Astrophysics Data System (ADS)

Guo, X. Y.; Williamson, T. L.; Bohn, P. W.

2006-10-01

The ultraviolet photoconductivity of porous GaN (PGaN) produced by Pt-assisted electroless etching has been investigated. The photoresponse of PGaN prepared from highly doped GaN ( n>1018 cm) shows enhanced ( 15×) magnitude and faster decay of persistent photoconductivity relative to bulk crystalline (CGaN), suggesting advantages for PGaN in photodetector applications. A space charge model for changes in photoconductivity is used to explain these observations. Heightened defect density in the etched material plays an important role in the enhanced photoconductivity in PGaN. Flux-dependent optical quenching (OQ) behavior, linked to the presence of metastable states, is also observed in PGaN as in CGaN.

Seismic characterization and dynamic site response of a municipal solid waste landfill in Bangalore, India.

PubMed

Anbazhagan, P; SivakumarBabu, G L; Lakshmikanthan, P; VivekAnand, K S

2016-03-01

Seismic design of landfills requires an understanding of the dynamic properties of municipal solid waste (MSW) and the dynamic site response of landfill waste during seismic events. The dynamic response of the Mavallipura landfill situated in Bangalore, India, is investigated using field measurements, laboratory studies and recorded ground motions from the intraplate region. The dynamic shear modulus values for the MSW were established on the basis of field measurements of shear wave velocities. Cyclic triaxial testing was performed on reconstituted MSW samples and the shear modulus reduction and damping characteristics of MSW were studied. Ten ground motions were selected based on regional seismicity and site response parameters have been obtained considering one-dimensional non-linear analysis in the DEEPSOIL program. The surface spectral response varied from 0.6 to 2 g and persisted only for a period of 1 s for most of the ground motions. The maximum peak ground acceleration (PGA) obtained was 0.5 g and the minimum and maximum amplifications are 1.35 and 4.05. Amplification of the base acceleration was observed at the top surface of the landfill underlined by a composite soil layer and bedrock for all ground motions. Dynamic seismic properties with amplification and site response parameters for MSW landfill in Bangalore, India, are presented in this paper. This study shows that MSW has less shear stiffness and more amplification due to loose filling and damping, which need to be accounted for seismic design of MSW landfills in India. © The Author(s) 2016.

A Novel Chitosan-γPGA Polyelectrolyte Complex Hydrogel Promotes Early New Bone Formation in the Alveolar Socket Following Tooth Extraction

PubMed Central

Chang, Hao-Hueng; Wang, Yin-Lin; Chiang, Yu-Chih; Chen, Yen-Liang; Chuang, Yu-Horng; Tsai, Shang-Jye; Heish, Kuo-Huang; Lin, Feng-Huei; Lin, Chun-Pin

2014-01-01

A novel chitosan-γPGA polyelectrolyte complex hydrogel (C-PGA) has been developed and proven to be an effective dressing for wound healing. The purpose of this study was to evaluate if C-PGA could promote new bone formation in the alveolar socket following tooth extraction. An animal model was proposed using radiography and histomorphology simultaneously to analyze the symmetrical sections of Wistar rats. The upper incisors of Wistar rats were extracted and the extraction sockets were randomly treated with gelatin sponge, neat chitosan, C-PGA, or received no treatment. The extraction sockets of selected rats from each group were evaluated at 1, 2, 4, or 6 wk post-extraction. The results of radiography and histopathology indicated that the extraction sockets treated with C-PGA exhibited lamellar bone formation (6.5%) as early as 2 wk after the extraction was performed. Moreover, the degree of new bone formation was significantly higher (P < 0.05) in the extraction sockets treated with C-PGA at 6 wk post-extraction than that in the other study groups. In this study, we demonstrated that the proposed animal model involving symmetrical sections and simultaneous radiography and histomorphology evaluation is feasible. We also conclude that the novel C-PGA has great potential for new bone formation in the alveolar socket following tooth extraction. PMID:24658174

Apoptosis of human lung adenocarcinoma A549 cells induced by prodigiosin analogue obtained from an entomopathogenic bacterium Serratia marcescens.

PubMed

Zhou, Wei; Jin, Zhi-Xiong; Wan, Yong-Ji

2010-12-01

An entomopathogenic bacterial strain SCQ1 was isolated from silkworm (Bombyx mori) and identified as Serratia marcescens via 16S rRNA gene analysis. This strain produces a red pigment that causes acute septicemia of silkworm. The red pigment of strain SCQ1 was identified as prodigiosin analogue (PGA) with various reported biological activities. In this study, we found that low concentration of PGA showed significant anticancer activity in human lung adenocarcinoma A549 cells, but has little effect in human bone marrow stem cells, in vitro. By exposure to different concentrations of PGA for 24 h, morphological changes and the MTT assay showed that A549 cell line was very sensitive to PGA, with IC(50) value about 2.2 mg/L. Early stage of apoptosis was detected by flow cytometry while A549 cells were treated with PGA for 4 and 12 h, respectively. The proportion of dead cells was increased with treatment time or the concentrations of PGA, but it was inversely proportional to that of apoptotic cells. These results indicate that PGA obtained from strain SCQ1 induces apoptosis in A549 cells, but the molecular mechanisms of cell death are complicated, and the S. marcescens strain SCQ1 may serve as a source of the anticancer compound, PGA.

The Cation-Responsive Protein NhaR of Escherichia coli Activates pgaABCD Transcription, Required for Production of the Biofilm Adhesin Poly-β-1,6-N-Acetyl-d-Glucosamine▿

PubMed Central

Goller, Carlos; Wang, Xin; Itoh, Yoshikane; Romeo, Tony

2006-01-01

The pgaABCD operon of Escherichia coli is required for production of the biofilm adhesin poly-β-1,6-N-acetyl-d-glucosamine (PGA). We establish here that NhaR, a DNA-binding protein of the LysR family of transcriptional regulators, activates transcription of this operon. Disruption of the nhaR gene decreased biofilm formation without affecting planktonic growth. PGA production was undetectable in an nhaR mutant strain. Expression of a pgaA′-′lacZ translational fusion was induced by NaCl and alkaline pH, but not by CaCl2 or sucrose, in an nhaR-dependent fashion. Primer extension and quantitative real-time reverse transcription-PCR analyses further revealed that NhaR affects the steady-state level of pga mRNA. A purified recombinant NhaR protein bound specifically and with high affinity within the pgaABCD promoter region; one apparent binding site overlaps the −35 element, and a second site lies immediately upstream of the first. This protein was necessary and sufficient for activation of in vitro transcription from the pgaA promoter. These results define a novel mechanism for regulation of biofilm formation in response to environmental conditions and suggest an expanded role for NhaR in promoting bacterial survival. PMID:16997959

Pyroglutamate (5-oxoproline) measured with hydrophilic interaction chromatography (HILIC) tandem mass spectrometry in acutely ill patients.

PubMed

Pretorius, Carel J; Reade, Michael C; Warnholtz, Chris; McWhinney, Brett; Phua, Meng Mei; Lipman, Jeffrey; Ungerer, Jacobus P J

2017-03-01

Pyroglutamic acid (PGA) is challenging to quantify in plasma and is a rare cause of metabolic acidosis that is associated with inherited disorders or acquired after exposure to drugs. We developed a hydrophilic interaction liquid chromatography tandem mass spectrometry method with a short analysis time. We established a reference interval and then measured PGA in acutely ill patients to investigate associations with clinical, pharmaceutical and laboratory parameters. The assay limit of the blank was 0.14μmol/L and was linear to 5000μmol/L with good precision. In-source formation of PGA from glutamate and glutamine was avoided by chromatographic separation. The PGA in controls had a reference interval of 22.6 to 47.8μmol/L. The median PGA concentration in acutely ill patients was similar (P=0.21), but 18 individuals were above the reference interval with concentrations up to 250μmol/L. We detected an association between PGA concentration and antibiotic and acetaminophen administration as well as renal impairment and severity of illness. Elevations of PGA in this unselected cohort were small compared to those reported in patients with pyroglutamic acidosis. The method is suitable for routine clinical use. We confirmed several expected associations with PGA in an acutely ill population. Crown Copyright © 2017. Published by Elsevier B.V. All rights reserved.

Mesenchymal stem cell-based repair of articular cartilage with polyglycolic acid-hydroxyapatite biphasic scaffold.

PubMed

Zhou, X Z; Leung, V Y; Dong, Q R; Cheung, K M; Chan, D; Lu, W W

2008-06-01

This study investigates the capacity of a composite scaffold composed of polyglycolic acid-hydroxyapatite (PGA-HA) and autologous mesenchymal stem cells (MSCs) to promote repair of osteochondral defects. MSCs from culture-expanded rabbits were seeded onto a PGA and HA scaffold. After a 72-hour co-culture period, the cell-adhered PGA and HA were joined together, forming an MSCs-PGA-HA composite. Full-thickness cartilage defects in the intercondylar fossa of the femur were then implanted with the MSC-PGA-HA composite, the PGA-HA scaffold only, or they were left empty (n=20). Animals were sacrificed 16 or 32 weeks after surgery and the gross appearance of the defects was evaluated. The specimens were examined histologically for morphologic features, and stained immunohistochemically for type 2 collagen. Specimens of the MSCs-PGA-HA composite implantation group demonstrated hyaline cartilage and a complete subchondral bone formation. At 16 weeks post-implantation, significant integration of the newly formed tissue with surrounding normal cartilage and subchondral bone was observed when compared to the two control groups. At 32 weeks, no sign of progressive degeneration of the newly formed tissue was found. A significant difference in histological grading score was found compared with the control groups. The novel MSCs-seeded, PGA-HA biphasic graft facilitated both articular cartilage and subchondral bone regeneration in an animal model and might serve as a new approach for clinical applications.

The synthesis and characterization of poly(γ-glutamic acid)-coated magnetite nanoparticles and their effects on antibacterial activity and cytotoxicity

NASA Astrophysics Data System (ADS)

Inbaraj, B. Stephen; Kao, T. H.; Tsai, T. Y.; Chiu, C. P.; Kumar, R.; Chen, B. H.

2011-02-01

Magnetite nanoparticles (MNPs) modified with sodium and calcium salts of poly(γ-glutamic acid) (NaPGA and CaPGA) were synthesized by the coprecipitation method, followed by characterization and evaluation of their antibacterial and cytotoxic effects. Superparamagnetic MNPs are particularly attractive for magnetic driving as well as bacterial biofilm and cell targeting in in vivo applications. Characterization of synthesized MNPs by the Fourier transform infrared spectra and magnetization curves confirmed the PGA coating on MNPs. The mean diameter of NaPGA- and CaPGA-coated MNPs as determined by transmission electron microscopy was 11.8 and 14 nm, respectively, while the x-ray diffraction pattern revealed the as-synthesized MNPs to be pure magnetite. Based on agar dilution assay, both NaPGA- and CaPGA-coated MNPs showed a lower minimum inhibitory concentration in Salmonella enteritidis SE 01 than the commercial antibiotics linezolid and cefaclor, but the former was effective against Escherichia coli ATCC 8739 and Staphylococcus aureus ATCC 10832, whereas the latter was effective against Escherichia coli O157:H7 TWC 01. An in vitro cytotoxicity study in human skin fibroblast cells as measured by MTT assay implied the as-synthesized MNPs to be nontoxic. This outcome demonstrated that both γ-PGA-modified MNPs are cytocompatible and possess antibacterial activity in vitro, and thereby should be useful in in vivo studies for biomedical applications.

l-Pyroglutamate Spontaneously Formed from l-Glutamate Inhibits Growth of the Hyperthermophilic Archaeon Sulfolobus solfataricus

PubMed Central

Park, Chan B.; Lee, Sun Bok; Ryu, Dewey D. Y.

2001-01-01

Identification of physiological and environmental factors that limit efficient growth of hyperthermophiles is important for practical application of these organisms to the production of useful enzymes or metabolites. During fed-batch cultivation of Sulfolobus solfataricus in medium containing l-glutamate, we observed formation of l-pyroglutamic acid (PGA). PGA formed spontaneously from l-glutamate under culture conditions (78°C and pH 3.0), and the PGA formation rate was much higher at an acidic or alkaline pH than at neutral pH. It was also found that PGA is a potent inhibitor of S. solfataricus growth. The cell growth rate was reduced by one-half by the presence of 5.1 mM PGA, and no growth was observed in the presence of 15.5 mM PGA. On the other hand, the inhibitory effect of PGA on cell growth was alleviated by addition of l-glutamate or l-aspartate to the medium. PGA was also produced from the l-glutamate in yeast extract; the PGA content increased to 8.5% (wt/wt) after 80 h of incubation of a yeast extract solution at 78°C and pH 3.0. In medium supplemented with yeast extract, cell growth was optimal in the presence of 3.0 g of yeast extract per liter, and higher yeast extract concentrations resulted in reduced cell yields. The extents of cell growth inhibition at yeast extract concentrations above the optimal concentration were correlated with the PGA concentration in the culture broth. Although other structural analogues of l-glutamate, such as l-methionine sulfoxide, glutaric acid, succinic acid, and l-glutamic acid γ-methyl ester, also inhibited the growth of S. solfataricus, the greatest cell growth inhibition was observed with PGA. We also observed that unlike other glutamate analogues, N-acetyl-l-glutamate enhanced the growth of S. solfataricus. This compound was stable under cell culture conditions, and replacement of l-glutamate with N-acetyl-l-glutamate in the medium resulted in increased cell density. PMID:11472943

Acceleration characteristics of human ocular accommodation.

PubMed

Bharadwaj, Shrikant R; Schor, Clifton M

2005-01-01

Position and velocity of accommodation are known to increase with stimulus magnitude, however, little is known about acceleration properties. We investigated three acceleration properties: peak acceleration, time-to-peak acceleration and total duration of acceleration to step changes in defocus. Peak velocity and total duration of acceleration increased with response magnitude. Peak acceleration and time-to-peak acceleration remained independent of response magnitude. Independent first-order and second-order dynamic components of accommodation demonstrate that neural control of accommodation has an initial open-loop component that is independent of response magnitude and a closed-loop component that increases with response magnitude.

Improved penicillin amidase production using a genetically engineered mutant of escherichia coli ATCC 11105

DOE Office of Scientific and Technical Information (OSTI.GOV)

Robas, N.; Zouheiry, H.; Branlant, G.

Penicillin G amidase (PGA) is a key enzyme for the industrial production of penicillin G derivatives used in therapeutics. Escherichia coli ATCC 11105 is the more commonly used strain for PGA production. To improve enzyme yield, the authors constructed various recombinant E. coli HB 101 and ATCC 11105 strains. For each strain, PGA production was determined for various concentrations of glucose and phenylacetic acid (PAA) in the medium. The E. coli strain, G271, was identified as the best performer (800 U NIPAB/L). This strain was obtained as follows: an E. coli ATCC 11105 mutant (E. coli G133) was first selectedmore » based on a low negative effect of glucose on PGA production. This mutant was then transformed with a pBR322 derivative containing the PGA gene. Various experiments were made to try to understand the reason for the high productivity of E. coli G271. The host strain, E. coli G133, was found to be mutated in one (or more) gene(s) whose product(s) act(s) in trans on the PGA gene expression. Its growth is not inhibited by high glucose concentration in the medium. Interestingly, whereas glucose still exerts some negative effect on the PGA production by E. coli G133, PGA production by its transformant (E. coli G271) is stimulated by glucose. The reason for this stimulation is discussed. Transformation of E. coli G133 with a pBR322 derivative containing the HindIII fragment of the PGA gene, showed that the performance of E. coli G271 depends both upon the host strain properties and the plasmid structure. Study of the production by the less efficient E. coli HB101 derivatives brought some light on the mechanism of regulation of the PGA gene.« less

Parental Virtue and Prenatal Genetic Alteration Research.

PubMed

Tonkens, Ryan

2015-12-01

Although the philosophical literature on the ethics of human prenatal genetic alteration (PGA) purports to inform us about how to act, it rarely explicitly recognizes the perspective of those who will be making the PGA decision in practice. Here I approach the ethics of PGA from a distinctly virtue-based perspective, taking seriously what it means to be a good parent making this decision for one's child. From this perspective, I generate a sound verdict on the moral standing of human PGA (research): given the current state of the art, good parents have compelling reason not to consent to PGA (research) for their child, especially as part of the first wave(s) of PGA research participants and especially for non-medically oriented purposes. This is because doing otherwise is inconsistent with a plausible and defensible understanding of virtuous parenting and parental virtues, founded on a genuine concern for promoting the overall flourishing of the eventual child. In essence, given the current and foreseeable state of the art, parents who allow prenatal genetic alteration of their children are less-than-virtuous parents to those children, even in cases where they have a right to do so and even if PGA turns out to be beneficial to the eventual child.

Quercetagetin-Loaded Zein-Propylene Glycol Alginate Ternary Composite Particles Induced by Calcium Ions: Structure Characterization and Formation Mechanism.

PubMed

Sun, Cuixia; Wei, Yang; Li, Ruirui; Dai, Lei; Gao, Yanxiang

2017-05-17

The complexation of zein and propylene glycol alginate (PGA) was confirmed to improve the entrapment efficiency and loading capacity of quercetagetin (Q) in our previous study. The present work focused on the influence and induction mechanism of calcium ions on structures of Q-loaded zein-PGA ternary composite particles. The incorporation of Ca 2+ resulted in the formation of aggregates with a large dimension between zein particles, led to obvious conformational, secondary, and tertiary structural changes of zein, and caused the disappearance of crystalline structure of zein. PGA exhibited a fine filamentous network structure and became much thicker and stronger in the presence of Ca 2+ . The presence of Q promoted the affinity and binding capacity of Ca 2+ to zein and PGA. An interwoven network structure with enhanced firmness and density was observed in Q-loaded zein-PGA composite particles, leading to improved thermal stability. Three potential mechanisms were proposed to explain the structural characteristics induced by Ca 2+ , including particle-particle collision for zein particles, chain-chain association for PGA molecules, and simultaneous cross-linking coupled with aggregating for Q-loaded zein-PGA composite particles.

Conversion of agroindustrial residues for high poly(γ-glutamic acid) production by Bacillus subtilis NX-2 via solid-state fermentation.

PubMed

Tang, Bao; Xu, Hong; Xu, Zongqi; Xu, Cen; Xu, Zheng; Lei, Peng; Qiu, Yibin; Liang, Jinfeng; Feng, Xiaohai

2015-04-01

Poly(γ-glutamic acid) (γ-PGA) production by Bacillus subtilis NX-2 was carried out through solid-state fermentation with dry mushroom residues (DMR) and monosodium glutamate production residues (MGPR; a substitute of glutamate) for the first time. Dry shiitake mushroom residue (DSMR) was found to be the most suitable solid substrate among these DMRs; the optimal DSMR-to-MGPR ratio was optimized as 12:8. To increase γ-PGA production, industrial waste glycerol was added as a carbon source supplement to the solid-state medium. As a result, γ-PGA production increased by 34.8%. The batch fermentation obtained an outcome of 115.6 g kg(-1) γ-PGA and 39.5×10(8) colony forming units g(-1) cells. Furthermore, a satisfactory yield of 107.7 g kg(-1) γ-PGA was achieved by compost experiment on a scale of 50 kg in open air, indicating that economically large-scale γ-PGA production was feasible. Therefore, this study provided a novel method to produce γ-PGA from abundant and low-cost agroindustrial residues. Copyright © 2015 Elsevier Ltd. All rights reserved.

Improved production of poly-γ-glutamic acid by Bacillus subtilis D7 isolated from Doenjang, a Korean traditional fermented food, and its antioxidant activity.

PubMed

Lee, Na-Ri; Lee, Sang-Mee; Cho, Kwang-Sik; Jeong, Seong-Yun; Hwang, Dae-Youn; Kim, Dong-Seob; Hong, Chang-Oh; Son, Hong-Joo

2014-06-01

The objectives of this study was to improve poly-γ-glutamic acid (γ-PGA) production by Bacillus subtilis D7 isolated from a Korean traditional fermented food and to assess its antioxidant activity for applications in the cosmetics and pharmaceutical industries. Strain D7 produced γ-PGA in the absence of L-glutamic acid, indicating L-glutamic acid-independent production. However, the addition of L-glutamic acid increased γ-PGA production. Several tricarboxylic acid cycle intermediates and amino acids could serve as the metabolic precursors for γ-PGA production, and the addition of pyruvic acid and D-glutamic acid to culture medium improved the yield of γ-PGA markedly. The maximum yield of γ-PGA obtained was 24.93 ± 0.64 g/l in improved medium, which was about 5.4-fold higher than the yield obtained in basal medium. γ-PGA was found to have 1,1-diphenyl-2-picrylhydrazyl (DPPH) radical scavenging activity (46.8 ± 1.5 %), hydroxyl radical scavenging activity (52.0 ± 1.8 %), 2,2'-azinobis-3-ethylbenzothiazoline-6-sulfonate (ABTS) radical scavenging activity (42.1 ± 1.8 %), nitric oxide scavenging activity (35.1 ± 1.3 %), reducing power (0.304 ± 0.008), and metal chelating activity (91.3 ± 3.5 %). These results indicate that γ-PGA has a potential use in the food, cosmetics, and biomedical industries for the development of novel products with radical scavenging activity. As far as we are aware, this is the first report to describe the antioxidant activityof γ-PGA produced by bacteria.

Translational Repression of NhaR, a Novel Pathway for Multi-Tier Regulation of Biofilm Circuitry by CsrA

PubMed Central

Pannuri, Archana; Yakhnin, Helen; Vakulskas, Christopher A.; Edwards, Adrianne N.; Babitzke, Paul

2012-01-01

The RNA binding protein CsrA (RsmA) represses biofilm formation in several proteobacterial species. In Escherichia coli, it represses the production of the polysaccharide adhesin poly-β-1,6-N-acetyl-d-glucosamine (PGA) by binding to the pgaABCD mRNA leader, inhibiting pgaA translation, and destabilizing this transcript. In addition, CsrA represses genes responsible for the synthesis of cyclic di-GMP, an activator of PGA production. Here we determined that CsrA also represses NhaR, a LysR-type transcriptional regulator which responds to elevated [Na+] and alkaline pH and activates the transcription of the pgaABCD operon. Gel shift studies revealed that CsrA binds at two sites in the 5′ untranslated segment of nhaR, one of which overlaps the Shine-Dalgarno sequence. An epitope-tagged NhaR protein, expressed from the nhaR chromosomal locus, and an nhaR posttranscriptional reporter fusion (PlacUV5-nhaR′-′lacZ) both showed robust repression by CsrA. Northern blotting revealed a complex transcription pattern for the nhaAR locus. Nevertheless, CsrA did not repress nhaR mRNA levels. Toeprinting assays showed that CsrA competes effectively with the ribosome for binding to the translation initiation region of nhaR. Together, these findings indicate that CsrA blocks nhaR translation. Epistasis studies with a pgaA-lacZ transcriptional fusion confirmed a model in which CsrA indirectly represses pgaABCD transcription via NhaR. We conclude that CsrA regulates the horizontally acquired pgaABCD operon and PGA biosynthesis at multiple levels. Furthermore, nhaR repression exemplifies an expanding role for CsrA as a global regulator of stress response systems. PMID:22037401

The association of clinical parameters and ultrasound verified inflammation with patients' and physicians' global assessments in psoriatic arthritis.

PubMed

Lackner, Angelika; Duftner, Christina; Ficjan, Anja; Gretler, Judith; Hermann, Josef; Husic, Rusmir; Graninger, Winfried B; Dejaco, Christian

2016-10-01

To study the association of clinical and/or ultrasound variables with patients' (PGA) and physicians' (EGA) global assessment of disease activity in psoriatic arthritis (PsA). The correlation of these parameters with the discordance between PGA and EGA, as well as with PGA/EGA changes over 6 months was also investigated. Prospective study of 83 consecutive PsA patients with 2 visits scheduled 6 months apart. All patients underwent the following assessments: tender (TJC) and swollen joint count (SJC), PASI, dactylitis and Leeds enthesitis index. PGA, patients' level of pain (pain VAS), EGA, and HAQ were also recorded. Grey scale (GS) and power Doppler (PD) ultrasound were performed at 68 joints (evaluating synovia and tendons) and 14 entheses. Regression analyses were performed to assess the association of these variables with PGA and EGA. Two new variables "PGAminusEGA" and "PGAchange - EGAchange" were developed to explore the discrepancy between PGA and EGA and the consistency of PGA/EGA changes over time, respectively. The parameters explaining most of PGA and EGA variability were pain VAS (30.5%) and SJC (48.5%), respectively. The correlation between EGA and joint counts was stronger in patients with high vs. low levels of ultrasound verified inflammation. PGAminusEGA was mainly explained by pain and SJC. Pain was the most important predictor of PGA change whereas TJC and HAQ were more closely associated with EGA changes. "PGAchange-EGAchange" was linked to pain and SJC. Ultrasound scores were not linked with either of these variables. Pain VAS and joint counts are the most important clinical parameters explaining patients' and physicians' perception of disease activity, whereas the correlation of active inflammation as verified by sonography with these factors is limited. Copyright © 2016 Elsevier Inc. All rights reserved.

Process optimization of microencapsulation of curcumin in γ-polyglutamic acid using response surface methodology.

PubMed

Ko, Wen-Ching; Chang, Chao-Kai; Wang, Hsiu-Ju; Wang, Shian-Jen; Hsieh, Chang-Wei

2015-04-01

The aim of this study was to develop an optimal microencapsulation method for an oil-soluble component (curcumin) using γ-PGA. The results show that Span80 significantly enhances the encapsulation efficiency (EE) of γ-Na(+)-PGA microcapsules. Therefore, the effects of γ-Na(+)-PGA, curcumin and Span80 concentration on EE of γ-Na(+)-PGA microcapsules were studied by means of response surface methodology (RSM). It was found that the optimal microencapsulation process is achieved by using γ-Na(+)-PGA 6.05%, curcumin 15.97% and Span80 0.61% with a high EE% (74.47 ± 0.20%). Furthermore, the models explain 98% of the variability in the responses. γ-Na(+)-PGA seems to be a good carrier for the encapsulation of curcumin. In conclusion, this simple and versatile approach can potentially be applied to the microencapsulation of various oil-soluble components for food applications. Copyright © 2014 Elsevier Ltd. All rights reserved.

Analysis of the Metabolic Pathways Affected by Poly(γ-glutamic Acid) in Arabidopsis thaliana Based on GeneChip Microarray.

PubMed

Xu, Zongqi; Lei, Peng; Feng, Xiaohai; Li, Sha; Xu, Hong

2016-08-17

Plant growth is promoted by poly(γ-glutamic acid) (γ-PGA). However, the molecular mechanism underlying such promotion is not yet well understood. Therefore, we used GeneChip microarrays to explore the effects of γ-PGA on gene transcription in Arabidopsis thaliana. Our results revealed 299 genes significantly regulated by γ-PGA. These differently expressed genes participate mainly in metabolic and cellular processes and in stimuli responses. The metabolic pathways linked to these differently expressed genes were also investigated. A total of 64 of the 299 differently expressed genes were shown to be directly involved in 24 pathways such as brassinosteroid biosynthesis, α-linolenic acid metabolism, phenylpropanoid biosynthesis, and nitrogen metabolism, all of which were influenced by γ-PGA. The analysis demonstrated that γ-PGA promoted nitrogen assimilation and biosynthesis of brassinosteroids, jasmonic acid, and lignins, providing a better explanation for why γ-PGA promotes growth and enhances stress tolerance in plants.

Biomolecular dynamics studied with IR-spectroscopy using quantum cascade lasers combined with nanosecond perturbation techniques

NASA Astrophysics Data System (ADS)

Popp, Alexander; Scheerer, David; Heck, Benjamin; Hauser, Karin

2017-06-01

Early events of protein folding can be studied with fast perturbation techniques triggering non-equilibrium relaxation dynamics. A nanosecond laser-excited pH-jump or temperature-jump (T-jump) was applied to initiate helix folding or unfolding of poly-L-glutamic acid (PGA). PGA is a homopolypeptide with titratable carboxyl side-chains whose protonation degree determines the PGA conformation. A pH-jump was realized by the photochemical release of protons and induces PGA folding due to protonation of the side-chains. Otherwise, the helical conformation can be unfolded by a T-jump. We operated under conditions where PGA does not aggregate and temperature and pH are the regulatory properties of its conformation. The experiments were performed in such a manner that the folding/unfolding jump proceeded to the same PGA conformation. We quantified the increase/decrease in helicity induced by the pH-/T-jump and demonstrated that the T-jump results in a relatively small change in helical content in contrast to the pH-jump. This is caused by the strong pH-dependence of the PGA conformation. The conformational changes were detected by time-resolved single wavelength IR-spectroscopy using quantum cascade lasers (QCL). We could independently observe the kinetics for α-helix folding and unfolding in PGA by using different perturbation techniques and demonstrate the high sensitivity of time-resolved IR-spectroscopy to study protein folding mechanisms.

Enhanced poly(γ-glutamic acid) production by H2 O2 -induced reactive oxygen species in the fermentation of Bacillus subtilis NX-2.

PubMed

Tang, Bao; Zhang, Dan; Li, Sha; Xu, Zongqi; Feng, Xiaohai; Xu, Hong

2016-09-01

Effects of reactive oxygen species (ROS) on cell growth and poly(γ-glutamic acid) (γ-PGA) synthesis were studied by adding hydrogen peroxide to a medium of Bacillus subtilis NX-2. After optimizing the addition concentration and time of H 2 O 2 , a maximum concentration of 33.9 g/L γ-PGA was obtained by adding 100 µM H 2 O 2 to the medium after 24 H. This concentration was 20.6% higher than that of the control. The addition of diphenyleneiodonium chloride (ROS inhibitor) can interdict the effect of H 2 O 2 -induced ROS. Transcriptional levels of the cofactors and relevant genes were also determined under ROS stress to illustrate the possible metabolic mechanism contributing to the improve γ-PGA production. The transcriptional levels of genes belonging to the tricarboxylic acid cycle and electron transfer chain system were significantly increased by ROS, which decreased the NADH/NAD + ratio and increased the ATP levels, thereby providing more reducing power and energy for γ-PGA biosynthesis. The enhanced γ-PGA synthetic genes also directly promoted the formation of γ-PGA. This study was the first to use the ROS control strategy for γ-PGA fermentation and provided valuable information on the possible mechanism by which ROS regulated γ-PGA biosynthesis in B. subtilis NX-2. © 2015 International Union of Biochemistry and Molecular Biology, Inc.

Biomolecular dynamics studied with IR-spectroscopy using quantum cascade lasers combined with nanosecond perturbation techniques.

PubMed

Popp, Alexander; Scheerer, David; Heck, Benjamin; Hauser, Karin

2017-06-15

Early events of protein folding can be studied with fast perturbation techniques triggering non-equilibrium relaxation dynamics. A nanosecond laser-excited pH-jump or temperature-jump (T-jump) was applied to initiate helix folding or unfolding of poly-l-glutamic acid (PGA). PGA is a homopolypeptide with titratable carboxyl side-chains whose protonation degree determines the PGA conformation. A pH-jump was realized by the photochemical release of protons and induces PGA folding due to protonation of the side-chains. Otherwise, the helical conformation can be unfolded by a T-jump. We operated under conditions where PGA does not aggregate and temperature and pH are the regulatory properties of its conformation. The experiments were performed in such a manner that the folding/unfolding jump proceeded to the same PGA conformation. We quantified the increase/decrease in helicity induced by the pH-/T-jump and demonstrated that the T-jump results in a relatively small change in helical content in contrast to the pH-jump. This is caused by the strong pH-dependence of the PGA conformation. The conformational changes were detected by time-resolved single wavelength IR-spectroscopy using quantum cascade lasers (QCL). We could independently observe the kinetics for α-helix folding and unfolding in PGA by using different perturbation techniques and demonstrate the high sensitivity of time-resolved IR-spectroscopy to study protein folding mechanisms. Copyright © 2017 Elsevier B.V. All rights reserved.

Regulation of lung endothelial permeability and inflammatory responses by prostaglandin A2: role of EP4 receptor

PubMed Central

Ohmura, Tomomi; Tian, Yufeng; Sarich, Nicolene; Ke, Yunbo; Meliton, Angelo; Shah, Alok S.; Andreasson, Katrin; Birukov, Konstantin G.; Birukova, Anna A.

2017-01-01

The role of prostaglandin A2 (PGA2) in modulation of vascular endothelial function is unknown. We investigated effects of PGA2 on pulmonary endothelial cell (EC) permeability and inflammatory activation and identified a receptor mediating these effects. PGA2 enhanced the EC barrier and protected against barrier dysfunction caused by vasoactive peptide thrombin and proinflammatory bacterial wall lipopolysaccharide (LPS). Receptor screening using pharmacological and molecular inhibitory approaches identified EP4 as a novel PGA2 receptor. EP4 mediated barrier-protective effects of PGA2 by activating Rap1/Rac1 GTPase and protein kinase A targets at cell adhesions and cytoskeleton: VE-cadherin, p120-catenin, ZO-1, cortactin, and VASP. PGA2 also suppressed LPS-induced inflammatory signaling by inhibiting the NFκB pathway and expression of EC adhesion molecules ICAM1 and VCAM1. These effects were abolished by pharmacological or molecular inhibition of EP4. In vivo, PGA2 was protective in two distinct models of acute lung injury (ALI): LPS-induced inflammatory injury and two-hit ALI caused by suboptimal mechanical ventilation and injection of thrombin receptor–activating peptide. These protective effects were abolished in mice with endothelial-specific EP4 knockout. The results suggest a novel role for the PGA2–EP4 axis in vascular EC protection that is critical for improvement of pathological states associated with increased vascular leakage and inflammation. PMID:28428256

Charting a New Course

ERIC Educational Resources Information Center

Matthews, Frank J.; Matthews, Joan Morgan

2008-01-01

This article features the University of Maryland Eastern Shore (UMES), which becomes the first historically Black university (HBCU) to receive a PGA Professional Golf Management Program. The PGA/PGM[TM] University Program is a four-and-a-half-year structured college curriculum for aspiring PGA professionals. The educational program is accredited…

Seismic fragility analysis of typical pre-1990 bridges due to near- and far-field ground motions

NASA Astrophysics Data System (ADS)

Mosleh, Araliya; Razzaghi, Mehran S.; Jara, José; Varum, Humberto

2016-03-01

Bridge damages during the past earthquakes caused several physical and economic impacts to transportation systems. Many of the existing bridges in earthquake prone areas are pre-1990 bridges and were designed with out of date regulation codes. The occurrences of strong motions in different parts of the world show every year the vulnerability of these structures. Nonlinear dynamic time history analyses were conducted to assess the seismic vulnerability of typical pre-1990 bridges. A family of existing concrete bridge representative of the most common bridges in the highway system in Iran is studied. The seismic demand consists in a set of far-field and near-field strong motions to evaluate the likelihood of exceeding the seismic capacity of the mentioned bridges. The peak ground accelerations (PGAs) were scaled and applied incrementally to the 3D models to evaluate the seismic performance of the bridges. The superstructure was assumed to remain elastic and the nonlinear behavior in piers was modeled by assigning plastic hinges in columns. In this study the displacement ductility and the PGA are selected as a seismic performance indicator and intensity measure, respectively. The results show that pre-1990 bridges subjected to near-fault ground motions reach minor and moderate damage states.

Debris flow susceptibility assessment after the 2008 Wenchuan earthquake

NASA Astrophysics Data System (ADS)

Fan, Xuanmei; van Westen, Cees; Tang, Chenxiao; Tang, Chuan

2014-05-01

Due to a tremendous amount of loose material from landslides that occurred during the Wenchuan earthquake, the frequency and magnitude of debris flows have been immensely increased, causing many casualties and economic losses. This study attempts to assess the post-earthquake debris flow susceptibility based on catchment units in the Wenchuan county, one of the most severely damaged county by the earthquake. The post earthquake debris flow inventory was created by RS image interpretation and field survey. According to our knowledge to the field, several relevant factors were determined as indicators for post-earthquake debris flow occurrence, including the distance to fault surface rupture, peak ground acceleration (PGA), coseismic landslide density, rainfall data, internal relief, slope, drainage density, stream steepness index, existing mitigation works etc. These indicators were then used as inputs in a heuristic model that was developed by adapting the Spatial Multi Criteria Evaluation (SMCE) method. The relative importance of the indicators was evaluated according to their contributions to the debris flow events that have occurred after the earthquake. The ultimate goal of this study is to estimate the relative likelihood of debris flow occurrence in each catchment, and use this result together with elements at risk and vulnerability information to assess the changing risk of the most susceptible catchment.

Effect of mechanical degradation of laminated elastomeric bearings and shear keys upon seismic behaviors of small-to-medium-span highway bridges in transverse direction

NASA Astrophysics Data System (ADS)

Wu, Gang; Wang, Kehai; Zhang, Panpan; Lu, Guanya

2018-01-01

Laminated elastomeric bearings have been widely used for small-to-medium-span highway bridges in China, in which concrete shear keys are set transversely to prohibit large girder displacement. To evaluate bridge seismic responses more accurately, proper analytical models of bearings and shear keys should be developed. Based on a series of cyclic loading experiments and analyses, rational analytical models of laminated elastomeric bearings and shear keys, which can consider mechanical degradation, were developed. The effect of the mechanical degradation was investigated by examining the seismic response of a small-to-medium-span bridge in the transverse direction under a wide range of peak ground accelerations (PGA). The damage mechanism for small-to-medium-span highway bridges was determined, which can explain the seismic damage investigation during earthquakes in recent years. The experimental results show that the mechanical properties of laminated elastomeric bearings will degrade due to friction sliding, but the degree of decrease is dependent upon the influencing parameters. It can be concluded that the mechanical degradation of laminated elastomeric bearings and shear keys play an important role in the seismic response of bridges. The degradation of mechanical properties of laminated elastomeric bearings and shear keys should be included to evaluate more precise bridge seismic performance.

Improving the seismic torsional behavior of plan-asymmetric, single-storey, concrete moment resisting buildings with fluid viscous dampers

NASA Astrophysics Data System (ADS)

Rofooei, Fayaz Rahimzadeh; Mohammadzadeh, Sahar

2016-03-01

The optimal distribution of fluid viscous dampers (FVD) in controlling the seismic response of eccentric, single-storey, moment resisting concrete structures is investigated using the previously defined center of damping constant (CDC). For this purpose, a number of structural models with different one-way stiffness and strength eccentricities are considered. Extensive nonlinear time history analyses are carried out for various arrangements of FVDs. It is shown that the arrangement of FVDs for controlling the torsional behavior due to asymmetry in the concrete structures is very dependent on the intensity of the peak ground acceleration (PGA) and the extent of the structural stiffness and strength eccentricities. The results indicate that, in the linear range of structural behavior the stiffness eccentricity es which is the main parameter in determining the location of optimal CDC, is found to be less or smaller than the optimal damping constant eccentricity e*d, i.e., |e*d| > |es|. But, in the nonlinear range of structural behavior where the strength eccentricity er is the dominant factor in determining the location of optimal CDC, |e*d| > |er|. It is also concluded that for the majority of the plan-asymmetric, concrete structures considered in this study with er ≠ 0, the optimal CDC approaches the center of mass as er decreases.

Nanoformulation of D-α-tocopheryl polyethylene glycol 1000 succinate-b-poly(ε-caprolactone-ran-glycolide) diblock copolymer for breast cancer therapy.

PubMed

Huang, Laiqiang; Chen, Hongbo; Zheng, Yi; Song, Xiaosong; Liu, Ranyi; Liu, Kexin; Zeng, Xiaowei; Mei, Lin

2011-10-01

The purpose of this research was to develop formulation of docetaxel-loaded biodegradable TPGS-b-(PCL-ran-PGA) nanoparticles for breast cancer chemotherapy. A novel diblock copolymer, d-α-tocopheryl polyethylene glycol 1000 succinate-b-poly(ε-caprolactone-ran-glycolide) [TPGS-b-(PCL-ran-PGA)], was synthesized from ε-caprolactone, glycolide and d-α-tocopheryl polyethylene glycol 1000 succinate by ring-opening polymerization using stannous octoate as catalyst. The obtained copolymers were characterized by (1)H NMR, GPC and TGA. The docetaxel-loaded TPGS-b-(PCL-ran-PGA) nanoparticles were prepared and characterized. The data showed that the fluorescence TPGS-b-(PCL-ran-PGA) nanoparticles could be internalized by MCF-7 cells. The TPGS-b-(PCL-ran-PGA) nanoparticles achieved significantly higher level of cytotoxicity than commercial Taxotere®. MCF-7 xenograft tumor model on SCID mice showed that docetaxel formulated in the TPGS-b-(PCL-ran-PGA) nanoparticles could effectively inhibit the growth of tumor over a longer period of time than Taxotere® at the same dose. In conclusion, the TPGS-b-(PCL-ran-PGA) copolymer could be acted as a novel and potential biologically active polymeric material for nanoformulation in breast cancer chemotherapy. This journal is © The Royal Society of Chemistry 2011

Unexplained metabolic acidosis in critically ill patients: the role of pyroglutamic acid.

PubMed

Mizock, Barry A; Belyaev, Stanislav; Mecher, Carter

2004-03-01

To determine the role of pyroglutamic acid (PGA) in the pathogenesis of unexplained metabolic acidosis in critically ill patients. Case series in the medical ICU of an urban hospital. 23 patients admitted to the medical ICU with acidemia (pH <7.35 or HC0(3) < or = 16 mEq/l) not explained by the presence of ketoacidosis, lactic acidosis, renal failure or ingestion of drugs or toxins and who had an increase in the strong ion gap (SIG) greater than 5. Plasma levels of sodium, potassium, chloride, bicarbonate, calcium (ionized), magnesium, lactate, phosphate, albumin, blood urea nitrogen, and creatinine were measured. Arterial blood gases and urine dipstick for ketones were also analyzed. Plasma was assayed for PGA using gas chromatography. The patient's history and Kardex were reviewed for evidence of acetaminophen administration. The plasma PGA level was found to be very low in all patients studied. The correlation between SIG and PGA (r) was -0.01 (95% CI: -0.42 to 0.40). PGA therefore did not account for the observed increase in the SIG. There appeared to be no obvious influence of acetaminophen intake on levels of PGA in the plasma. We were unable to confirm the importance of PGA as a cause of unexplained metabolic acidosis and increased SIG in our critically ill patients.

Allosteric activation of exopolysaccharide synthesis through cyclic di-GMP-stimulated protein–protein interaction

PubMed Central

Steiner, Samuel; Lori, Christian; Boehm, Alex; Jenal, Urs

2013-01-01

In many bacterial pathogens, the second messenger c-di-GMP stimulates the production of an exopolysaccharide (EPS) matrix to shield bacteria from assaults of the immune system. How c-di-GMP induces EPS biogenesis is largely unknown. Here, we show that c-di-GMP allosterically activates the synthesis of poly-β-1,6-N-acetylglucosamine (poly-GlcNAc), a major extracellular matrix component of Escherichia coli biofilms. C-di-GMP binds directly to both PgaC and PgaD, the two inner membrane components of the poly-GlcNAc synthesis machinery to stimulate their glycosyltransferase activity. We demonstrate that the PgaCD machinery is a novel type c-di-GMP receptor, where ligand binding to two proteins stabilizes their interaction and promotes enzyme activity. This is the first example of a c-di-GMP-mediated process that relies on protein–protein interaction. At low c-di-GMP concentrations, PgaD fails to interact with PgaC and is rapidly degraded. Thus, when cells experience a c-di-GMP trough, PgaD turnover facilitates the irreversible inactivation of the Pga machinery, thereby temporarily uncoupling it from c-di-GMP signalling. These data uncover a mechanism of c-di-GMP-mediated EPS control and provide a frame for c-di-GMP signalling specificity in pathogenic bacteria. PMID:23202856

Simulation of broad-band strong ground motion for a hypothetical Mw 7.1 earthquake on the Enriquillo Fault in Haiti

NASA Astrophysics Data System (ADS)

Douilly, Roby; Mavroeidis, George P.; Calais, Eric

2017-10-01

The devastating 2010 Mw 7.0 Haiti earthquake demonstrated the need to improve mitigation and preparedness for future seismic events in the region. Previous studies have shown that the earthquake did not occur on the Enriquillo Fault, the main plate boundary fault running through the heavily populated Port-au-Prince region, but on the nearby and previously unknown transpressional Léogâne Fault. Slip on that fault has increased stresses on the segment of Enriquillo Fault to the east of Léogâne, which terminates in the ˜3-million-inhabitant capital city of Port-au-Prince. In this study, we investigate ground shaking in the vicinity of Port-au-Prince, if a hypothetical rupture similar to the 2010 Haiti earthquake occurred on that segment of the Enriquillo Fault. We use a finite element method and assumptions on regional tectonic stress to simulate the low-frequency ground motion components using dynamic rupture propagation for a 52-km-long segment. We consider eight scenarios by varying parameters such as hypocentre location, initial shear stress and fault dip. The high-frequency ground motion components are simulated using the specific barrier model in the context of the stochastic modeling approach. The broad-band ground motion synthetics are subsequently obtained by combining the low-frequency components from the dynamic rupture simulation with the high-frequency components from the stochastic simulation using matched filtering at a crossover frequency of 1 Hz. Results show that rupture on a vertical Enriquillo Fault generates larger horizontal permanent displacements in Léogâne and Port-au-Prince than rupture on a south-dipping Enriquillo Fault. The mean horizontal peak ground acceleration (PGA), computed at several sites of interest throughout Port-au-Prince, has a value of ˜0.45 g, whereas the maximum horizontal PGA in Port-au-Prince is ˜0.60 g. Even though we only consider a limited number of rupture scenarios, our results suggest more intense ground shaking for the city of Port-au-Prince than during the already very damaging 2010 Haiti earthquake.

Effect of Fault Parameter Uncertainties on PSHA explored by Monte Carlo Simulations: A case study for southern Apennines, Italy

NASA Astrophysics Data System (ADS)

Akinci, A.; Pace, B.

2017-12-01

In this study, we discuss the seismic hazard variability of peak ground acceleration (PGA) at 475 years return period in the Southern Apennines of Italy. The uncertainty and parametric sensitivity are presented to quantify the impact of the several fault parameters on ground motion predictions for 10% exceedance in 50-year hazard. A time-independent PSHA model is constructed based on the long-term recurrence behavior of seismogenic faults adopting the characteristic earthquake model for those sources capable of rupturing the entire fault segment with a single maximum magnitude. The fault-based source model uses the dimensions and slip rates of mapped fault to develop magnitude-frequency estimates for characteristic earthquakes. Variability of the selected fault parameter is given with a truncated normal random variable distribution presented by standard deviation about a mean value. A Monte Carlo approach, based on the random balanced sampling by logic tree, is used in order to capture the uncertainty in seismic hazard calculations. For generating both uncertainty and sensitivity maps, we perform 200 simulations for each of the fault parameters. The results are synthesized both in frequency-magnitude distribution of modeled faults as well as the different maps: the overall uncertainty maps provide a confidence interval for the PGA values and the parameter uncertainty maps determine the sensitivity of hazard assessment to variability of every logic tree branch. These branches of logic tree, analyzed through the Monte Carlo approach, are maximum magnitudes, fault length, fault width, fault dip and slip rates. The overall variability of these parameters is determined by varying them simultaneously in the hazard calculations while the sensitivity of each parameter to overall variability is determined varying each of the fault parameters while fixing others. However, in this study we do not investigate the sensitivity of mean hazard results to the consideration of different GMPEs. Distribution of possible seismic hazard results is illustrated by 95% confidence factor map, which indicates the dispersion about mean value, and coefficient of variation map, which shows percent variability. The results of our study clearly illustrate the influence of active fault parameters to probabilistic seismic hazard maps.

Bacterial-Derived Polymer Poly-y-Glutamic Acid (y-PGA)-Based Micro/Nanoparticles as a Delivery System for Antimicrobials and Other Biomedical Applications.

PubMed

Khalil, Ibrahim R; Burns, Alan T H; Radecka, Iza; Kowalczuk, Marek; Khalaf, Tamara; Adamus, Grazyna; Johnston, Brian; Khechara, Martin P

2017-02-02

In the past decade, poly-γ-glutamic acid (γ-PGA)-based micro/nanoparticles have garnered remarkable attention as antimicrobial agents and for drug delivery, owing to their controlled and sustained-release properties, low toxicity, as well as biocompatibility with tissue and cells. γ-PGA is a naturally occurring biopolymer produced by several gram-positive bacteria that, due to its biodegradable, non-toxic and non-immunogenic properties, has been used successfully in the medical, food and wastewater industries. Moreover, its carboxylic group on the side chains can offer an attachment point to conjugate antimicrobial and various therapeutic agents, or to chemically modify the solubility of the biopolymer. The unique characteristics of γ-PGA have a promising future for medical and pharmaceutical applications. In the present review, the structure, properties and micro/nanoparticle preparation methods of γ-PGA and its derivatives are covered. Also, we have highlighted the impact of micro/nanoencapsulation or immobilisation of antimicrobial agents and various disease-related drugs on biodegradable γ-PGA micro/nanoparticles.

Bacterial-Derived Polymer Poly-γ-Glutamic Acid (γ-PGA)-Based Micro/Nanoparticles as a Delivery System for Antimicrobials and Other Biomedical Applications

PubMed Central

Khalil, Ibrahim R.; Burns, Alan T. H.; Radecka, Iza; Kowalczuk, Marek; Khalaf, Tamara; Adamus, Grazyna; Johnston, Brian; Khechara, Martin P.

2017-01-01

In the past decade, poly-γ-glutamic acid (γ-PGA)-based micro/nanoparticles have garnered remarkable attention as antimicrobial agents and for drug delivery, owing to their controlled and sustained-release properties, low toxicity, as well as biocompatibility with tissue and cells. γ-PGA is a naturally occurring biopolymer produced by several gram-positive bacteria that, due to its biodegradable, non-toxic and non-immunogenic properties, has been used successfully in the medical, food and wastewater industries. Moreover, its carboxylic group on the side chains can offer an attachment point to conjugate antimicrobial and various therapeutic agents, or to chemically modify the solubility of the biopolymer. The unique characteristics of γ-PGA have a promising future for medical and pharmaceutical applications. In the present review, the structure, properties and micro/nanoparticle preparation methods of γ-PGA and its derivatives are covered. Also, we have highlighted the impact of micro/nanoencapsulation or immobilisation of antimicrobial agents and various disease-related drugs on biodegradable γ-PGA micro/nanoparticles. PMID:28157175

Phrasing of the patient global assessment in the rheumatoid arthritis ACR/EULAR remission criteria: an analysis of 967 patients from two databases of early and established rheumatoid arthritis patients.

PubMed

Gossec, Laure; Kirwan, John Richard; de Wit, Maarten; Balanescu, Andra; Gaujoux-Viala, Cecile; Guillemin, Francis; Rat, Anne-Christine; Saraux, Alain; Fautrel, Bruno; Kvien, Tore K; Dougados, Maxime

2018-06-01

The ACR/EULAR Boolean remission criteria for rheumatoid arthritis (RA) include a strict cutoff for patient global assessment (PGA, value ≤ 1/10). Near-remission corresponds to remission for joint counts and C-reactive protein but with PGA > 1. The objective was to explore whether the contribution of PGA to remission and near-remission varied according to the wording of the PGA and in relation to disease duration. In patients with early arthritis (N = 731, French ESPOIR cohort) or established RA (N = 236 patients from across Europe), frequency of remission versus near-remission was assessed according to the phrasing used for PGA (global health versus disease activity). In 967 patients (mean [standard deviation] age 49.7 [12.7] years, 76.7% women), remission was infrequent: range 12.9-16.7% (according to wording of PGA) in early RA and 6.8-7.2% in established RA. Near-remission was more frequent: 13.0-16.8% in early RA and 13.1-13.6% in established RA. The ratio of remission to near-remission was higher in the early arthritis cohort (0.8-1.3 versus 0.5-0.5 in established RA). Using the disease activity PGA led to more remission and less near-remission than the global health PGA in the early arthritis cohort (12.9 vs 16.7% near-remission, respectively, p = 0.047) but not in established RA. The proportion of patients who can be classified as remission or near-remission differs in early RA compared to establish RA and depends upon the formulation of the PGA question. PGA referring to disease activity and not global health may be preferred in early disease, if the objective is more alignment with inflammation assessment.

The role of photorespiration during astaxanthin accumulation in Haematococcus pluvialis (Chlorophyceae).

PubMed

Zhang, Chunhui; Zhang, Litao; Liu, Jianguo

2016-10-01

Most previous studies on Haematococcus pluvialis have been focused on growth and astaxanthin accumulation. However, the relationships between photorespiration and astaxanthin accumulation have not been clarified. The purpose of this study was to examine the role of photorespiration during the process of astaxanthin accumulation in H. pluvialis. During astaxanthin accumulation, the astaxanthin content was reduced significantly when photorespiration was inhibited by its specific inhibitor, carboxymethoxylamine. The inhibition of photorespiration did not change the dry weight, chlorophyll content and OJIP transients during the incubation; however, the inhibition of photorespiration significantly decreased the photochemistry of photosystem II and total photosynthetic O2 evolution capacity. Moreover, the restriction in photorespiration was synchronized with a decrease of astaxanthin accumulation. These results suggest that the photorespiratory pathway in H. pluvialis can accelerate astaxanthin accumulation. We speculate that photorespiration can enhance astaxanthin accumulation in the following ways: (i) photorespiration directly affects the glycerate-3-phosphate (PGA) level, which is intrinsically related to the accumulation of astaxanthin in H. pluvialis; (ii) the photorespiratory pathway indirectly affects the PGA level by effecting the dark reactions of photosynthesis, which then results in the enhancement of astaxanthin accumulation in H. pluvialis. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

The study of gamma irradiation effects on poly (glycolic acid)

NASA Astrophysics Data System (ADS)

Rao Nakka, Rajeswara; Rao Thumu, Venkatappa; Reddy SVS, Ramana; Rao Buddhiraju, Sanjeeva

2015-05-01

We have investigated the effects of gamma irradiation on chemical structure, thermal and morphological properties of biodegradable semi-crystalline poly (glycolic acid) (PGA). PGA samples were subjected to irradiation treatment using a 60Co gamma source with a delivered dose of 30, 60 and 90 kGy, respectively. Gamma irradiation induces cleavage of PGA main chains forming ∼OĊH2 and ĊH2COO∼ radicals in both amorphous and crystalline regions. The free radicals formed in the amorphous region abstract atmospheric oxygen and convert them to peroxy radicals. The peroxy radical causes chain scission at the crystal interface through hydrogen abstraction from methylene groups forming the ∼ĊHCOO∼ (I) radical. Consequently, the observed electron spin resonance (ESR) doublet of irradiated PGA is assigned to (I). The disappearance of the ESR signal above 190°C indicates that free radicals are formed in the amorphous region and decay below the melting temperature of PGA. Fourier transform infrared and optical absorption studies confirm that the ? groups are not influenced by gamma irradiation. Differential scanning calorimetry (DSC) studies showed that the melting temperature of PGA decreased from 212°C to 202°C upon irradiation. Degree of crystallinity increased initially and then decreased with an increase in radiation as per DSC and X-ray diffraction studies. Irradiation produced changes in the physical properties of PGA as well as affecting the morphology of the material.

Comparative analysis of poly-glycolic acid-based hybrid polymer starter matrices for in vitro tissue engineering.

PubMed

Generali, Melanie; Kehl, Debora; Capulli, Andrew K; Parker, Kevin K; Hoerstrup, Simon P; Weber, Benedikt

2017-10-01

Biodegradable scaffold matrixes form the basis of any in vitro tissue engineering approach by acting as a temporary matrix for cell proliferation and extracellular matrix deposition until the scaffold is replaced by neo-tissue. In this context several synthetic polymers have been investigated, however a concise systematic comparative analyses is missing. Therefore, the present study systematically compares three frequently used polymers for the in vitro engineering of extracellular matrix based on poly-glycolic acid (PGA) under static as well as dynamic conditions. Ultra-structural analysis was used to examine the polymers structure. For tissue engineering (TE) three human fibroblast cell lines were seeded on either PGA-poly-4-hydroxybutyrate (P4HB), PGA-poly-lactic acid (PLA) or PGA-poly-caprolactone (PCL) patches. These patches were analyzed after 21days of culture qualitative by histology and quantitative by determining the amount of DNA, glycosaminoglycan and hydroxyproline. We found that PGA-P4HB and PGA-PLA scaffolds enhance tissue formation significantly higher than PGA-PCL scaffolds (p<0.05). Polymer remnants were visualized by polarization microscopy. In addition, biomechanical properties of the tissue engineered patches were determined in comparison to native tissue. This study may allow future studies to specifically select certain polymer starter matrices aiming at specific tissue properties of the bioengineered constructs in vitro. Copyright © 2017 Elsevier B.V. All rights reserved.

Cloning, overexpression, crystallization and preliminary X-ray crystallographic analysis of a slow-processing mutant of penicillin G acylase from Kluyvera citrophila.

PubMed

Varshney, Nishant Kumar; Ramasamy, Sureshkumar; Brannigan, James A; Wilkinson, Anthony J; Suresh, C G

2013-08-01

Kluyvera citrophila penicillin G acylase (KcPGA) has recently attracted increased attention relative to the well studied and commonly used Escherichia coli PGA (EcPGA) because KcPGA is more resilient to harsh conditions and is easier to immobilize for the industrial hydrolysis of natural penicillins to generate the 6-aminopenicillin (6-APA) nucleus, which is the starting material for semi-synthetic antibiotic production. Like other penicillin acylases, KcPGA is synthesized as a single-chain inactive pro-PGA, which upon autocatalytic processing becomes an active heterodimer of α and β chains. Here, the cloning of the pac gene encoding KcPGA and the preparation of a slow-processing mutant precursor are reported. The purification, crystallization and preliminary X-ray analysis of crystals of this precursor protein are described. The protein crystallized in two different space groups, P1, with unit-cell parameters a = 54.0, b = 124.6, c = 135.1 Å, α = 104.1, β = 101.4, γ = 96.5°, and C2, with unit-cell parameters a = 265.1, b = 54.0, c = 249.2 Å, β = 104.4°, using the sitting-drop vapour-diffusion method. Diffraction data were collected at 100 K and the phases were determined using the molecular-replacement method. The initial maps revealed electron density for the spacer peptide.

Both Leukotoxin and Poly-N-Acetylglucosamine Surface Polysaccharide Protect Aggregatibacter actinomycetemcomitans Cells from Macrophage Killing

PubMed Central

Venketaraman, Vishwanath; Lin, Albert K.; Le, Amy; Kachlany, Scott C.; Connell, Nancy D.; Kaplan, Jeffrey B.

2008-01-01

Two virulence factors produced by the periodontopathogen Aggregatibacter actinomycetemcomitans are leukotoxin, a secreted lipoprotein that kills human polymorphonuclear leukocytes and macrophages, and poly-N-acetylglucosamine (PGA), a surface polysaccharide that mediates intercellular adhesion, biofilm formation and detergent resistance. In this study we examined the roles of leukotoxin and PGA in protecting A. actinomycetemcomitans cells from killing by the human macrophage cell line THP-1. Monolayers of THP-1 cells were infected with single-cell suspensions of a wild-type A. actinomycetemcomitans strain, or of isogenic leukotoxin or PGA mutant strains. After 48 h, viable bacteria were enumerated by dilution plating, macrophage morphology was evaluated microscopically, and macrophage viability was measured by a Trypan blue dye exclusion assay. The number of A. actinomycetemcomitans CFUs increased approximately 2-fold in wells infected with the wild-type strain, but decreased by approximately 70–90% in wells infected with the leukotoxin and PGA mutant strains. Infection with the wild-type or leukotoxin mutant strain caused a significant decrease in THP-1 cell viability, whereas infection with the PGA mutant strain did not result in any detectable changes in THP-1 viability. Pre-treatment of wild-type A. actinomycetemcomitans cells with the PGA-hydrolyzing enzyme dispersin B rendered them sensitive to killing by THP-1 cells. We concluded that both leukotoxin and PGA are necessary for evasion of macrophage killing by A. actinomycetemcomitans. PMID:18573331

Bridging the Generation Gap: "Growing Golf" through an Action Learning Activity

ERIC Educational Resources Information Center

Elbert, Norb; Cumiskey, Kevin J.

2014-01-01

This paper describes an action learning simulation designed for a Professional Golf Management (PGM) program housed in a College of Business of a public university. The PGA Golf Management University Program, a 4.5- to 5-year college curriculum for aspiring PGA Professionals is offered at 19 PGA accredited universities nationwide. The program…

An Online Cross-Sectional Comparison of Women With Symptoms of Persistent Genital Arousal, Painful Persistent Genital Arousal, and Chronic Vulvar Pain.

PubMed

Jackowich, Robyn A; Pink, Leah; Gordon, Allan; Poirier, Évéline; Pukall, Caroline F

2018-04-01

Persistent genital arousal disorder (PGAD) is an understudied condition characterized by unwanted physiologic genital arousal in the absence of subjective sexual arousal. Markos and Dinsmore (Int J STD AIDS 2013;24:852-858) theorized that PGAD shares a number of similarities with vulvodynia (unexplained chronic vulvar pain [CVP]), including symptom characteristics and comorbidities. To compare medical histories, symptom characteristics, pain characteristics, and daily functioning among women with persistent genital pain (PGA) (n = 42), painful PGA (n = 37), and CVP (n = 42) symptoms. An online cross-sectional survey was conducted from October 2015 through April 2016. Self-report measures of symptoms, diagnosed medical conditions, pain characteristics (McGill Pain Questionnaire), catastrophizing (Pain Catastrophizing Scale), and daily functioning (Functional Status Questionnaire) were collected. All 3 groups reported similar medical diagnoses and high frequencies of other chronic pelvic pain conditions. Women in all 3 groups reported comparable ages at symptom onset and timing of symptom expression (ie, constant vs intermittent). Women in the 2 PGA groups reported significantly greater feelings of helplessness than women in the CVP group. Women in the painful PGA and CVP groups endorsed significantly more sensory terms to describe their symptoms compared with women in the PGA group, whereas women in the painful PGA group reported significantly more affective terms to describe their symptoms compared with women in the CVP group. Women in the 2 PGA groups reported that their symptoms interfered significantly with most areas of daily functioning. Given the similarities between PGA and CVP symptoms, women with PGA may benefit from similar assessment, treatment, and research approaches. Limitations of the present study include its sole use of self-report measures; the presence of PGA or CVP symptoms was not confirmed by clinical assessment. However, the anonymous design of the online survey could have resulted in a larger and more diverse sample. The results of this study provide some initial support for the conceptualization of persistent genital arousal as a subtype of genital paresthesias/discomfort. These results also further highlight the negative impact that PGA symptoms have on many domains of daily living and the need for further research on this distressing condition. Jackowich RA, Pink L, Gordon A, et al. An Online Cross-Sectional Comparison of Women With Symptoms of Persistent Genital Arousal, Painful Persistent Genital Arousal, and Chronic Vulvar Pain. J Sex Med 2018;15:558-567. Copyright © 2018 International Society for Sexual Medicine. Published by Elsevier Inc. All rights reserved.

Poly(γ-Glutamic Acid) as an Exogenous Promoter of Chondrogenic Differentiation of Human Mesenchymal Stem/Stromal Cells.

PubMed

Antunes, Joana C; Tsaryk, Roman; Gonçalves, Raquel M; Pereira, Catarina Leite; Landes, Constantin; Brochhausen, Christoph; Ghanaati, Shahram; Barbosa, Mário A; Kirkpatrick, C James

2015-06-01

Cartilage damage and/or aging effects can cause constant pain, which limits the patient's quality of life. Although different strategies have been proposed to enhance the limited regenerative capacity of cartilage tissue, the full production of native and functional cartilaginous extracellular matrix (ECM) has not yet been achieved. Poly(γ-glutamic acid) (γ-PGA), a naturally occurring polyamino acid, biodegradable into glutamate residues, has been explored for tissue regeneration. In this work, γ-PGA's ability to support the production of cartilaginous ECM by human bone marrow mesenchymal stem/stromal cells (MSCs) and nasal chondrocytes (NCs) was investigated. MSC and NC pellets were cultured in basal medium (BM), chondrogenic medium (CM), and CM-γ-PGA-supplemented medium (CM+γ-PGA) over a period of 21 days. Pellet size/shape was monitored with time. At 14 and 21 days of culture, the presence of sulfated glycosaminoglycans (sGAGs), type II collagen (Col II), Sox-9, aggrecan, type XI collagen (Col XI), type X collagen (Col X), calcium deposits, and type I collagen (Col I) was analyzed. After excluding γ-PGA's cytotoxicity, earlier cell condensation, higher sGAG content, Col II, Sox-9 (day 14), aggrecan, and Col X (day 14) production was observed in γ-PGA-supplemented MSC cultures, with no signs of mineralization or Col I. These effects were not evident with NCs. However, Sox-9 (at day 14) and Col X (at days 14 and 21) were increased, decreased, or absent, respectively. Overall, γ-PGA improved chondrogenic differentiation of MSCs, increasing ECM production earlier in culture. It is proposed that γ-PGA incorporation in novel biomaterials has a beneficial impact on future approaches for cartilage regeneration.

Trend of change in retentive force for bar attachments with different materials.

PubMed

Saito, Marie; Kanazawa, Manabu; Takahashi, Hidekazu; Uo, Motohiro; Minakuchi, Shunsuke

2014-12-01

Attachment wear can decrease the retentive force of 2-implant overdentures (2-IODs). The purpose of this in vitro study was to investigate the trend of change in retentive force for 6 different bar attachments during dislodgement. Round and Dolder bars were made of platinum-added gold alloy (PGA), cobalt chromium alloy (Co-Cr), and commercially pure titanium grade IV (Ti). Clips were made of PGA. Retentive force was measured during 7200 dislodging cycles. Simple linear regression analysis was performed in order to investigate the relationship between number of cycles and retentive force (P<.05). Subsequently, wear debris was analyzed, and the surface of the attachments was observed. The retentive force of the Co-Cr round bar attachment (CoCr-R) increased from 57.5 N to 68.3 N and the Ti round bar attachment (Ti-R) from 54.8 N to 59.7 N. However, the retentive force of the PGA round bar attachment (PGA-R) decreased from 69.3 N to 64.0 N. A positive relationship was found between the number of cycles and the retentive force of both CoCr-R and Ti-R. The composition of the wear debris was almost the same as for PGA. For the Dolder bar attachment, no changes were seen in retentive force (between 7.0 N to 12.0 N). For the round bar attachment, the PGA clip and PGA bar showed wear. The retentive force of PGA-R slightly decreased. The retentive force of CoCr-R and Ti-R tended to increase. For the Dolder bar attachment, all 3 types of bar attachment showed no wear. Copyright © 2014 Editorial Council for the Journal of Prosthetic Dentistry. Published by Elsevier Inc. All rights reserved.

Self-assembled amphotericin B-loaded polyglutamic acid nanoparticles: preparation, characterization and in vitro potential against Candida albicans

PubMed Central

Zia, Qamar; Khan, Aijaz Ahmed; Swaleha, Zubair; Owais, Mohammad

2015-01-01

In the present study, we developed a self-assembled biodegradable polyglutamic acid (PGA)-based formulation of amphotericin B (AmB) and evaluated its in vitro antifungal potential against Candida albicans. The AmB-loaded PGA nanoparticles were prepared in-house and had a mean size dimension of around 98±2 nm with a zeta potential of −35.2±7.3 mV. Spectroscopic studies revealed that the drug predominantly acquires an aggregated form inside the formulation with an aggregation ratio above 2. The PGA-based AmB formulation was shown to be highly stable in phosphate-buffered saline as well as in serum (only 10%–20% of the drug was released after 10 days). The AmB–PGA nanoparticles were less toxic to red blood cells (<15% lysis at an AmB concentration of 100 μg/mL after 24 hours) when compared with Fungizone®, a commercial antifungal product. An MTT assay showed that the viability of mammalian cells (KB and RAW 264.7) was negligibly affected at AmB concentrations as high as 200 μg/mL. Histopathological examination of mouse kidney revealed no signs of tissue necrosis. The AmB–PGA formulation showed potent antimicrobial activity similar to that of Fungizone against C. albicans. Interestingly, AmB-bearing PGA nanoparticles were found to inhibit biofilm formation to a considerable extent. In summary, AmB–PGA nanoparticles showed highly attenuated toxicity when compared with Fungizone, while retaining equivalent active antifungal properties. This study indicates that the AmB–PGA preparation could be a promising treatment for various fungal infections. PMID:25784804

Poly-γ-glutamic acid productivity of Bacillus subtilis BsE1 has positive function in motility and biocontrol against Fusarium graminearum.

PubMed

Wang, Luyao; Wang, Ning; Mi, Dandan; Luo, Yuming; Guo, Jianhua

2017-07-01

In this study, we investigate the relationship between γ-PGA productivity and biocontrol capacity of Bacillus subtilis BsE1; one bacterial isolate displayed 62.14% biocontrol efficacy against Fusarium root rot. The γ-PGA yield assay, motility assay, wheat root colonization assay, and biological control assay were analysed in different γ-PGA yield mutants of BsE1. The pgsB (PGA-synthase-CapB gene) deleted mutant of BsE1 reduced γ-PGA yield and exhibited apparent decline of in vitro motile ability. Deletion of pgsB impaired colonizing capacity of BsE1 on wheat root in 30 days, also lowered biocontrol efficacies from 62.08% (wild type BsE1) to 14.22% in greenhouse experiment against Fusarium root rot. The knockout of pgdS and ggt (genes relate to two γ-PGA degrading enzymes) on BsE1, leads to a considerable improvement in polymer yield and biocontrol efficacy, which attains higher level compared with wild type BsE1. Compared with ΔpgsB mutant, defense genes related to reactive oxygen species (ROS) and phytoalexin expressed changes by notable levels on wheat roots treated with BsE1, demonstrating the functional role γ-PGA plays in biocontrol against Fusarium root rot. γ-PGA is not only important to the motile and plant root colonization ability of BsE1, but also essential to the biological control performed by BsE1 against Fusarium root rot. Our goal in this study is to reveals a new perspective of BCAs screening on bacterial isolates, without good performance during pre-assays of antagonism ability.

Poly(γ-Glutamic Acid) as an Exogenous Promoter of Chondrogenic Differentiation of Human Mesenchymal Stem/Stromal Cells

PubMed Central

Antunes, Joana C.; Tsaryk, Roman; Gonçalves, Raquel M.; Pereira, Catarina Leite; Landes, Constantin; Brochhausen, Christoph; Ghanaati, Shahram

2015-01-01

Cartilage damage and/or aging effects can cause constant pain, which limits the patient's quality of life. Although different strategies have been proposed to enhance the limited regenerative capacity of cartilage tissue, the full production of native and functional cartilaginous extracellular matrix (ECM) has not yet been achieved. Poly(γ-glutamic acid) (γ-PGA), a naturally occurring polyamino acid, biodegradable into glutamate residues, has been explored for tissue regeneration. In this work, γ-PGA's ability to support the production of cartilaginous ECM by human bone marrow mesenchymal stem/stromal cells (MSCs) and nasal chondrocytes (NCs) was investigated. MSC and NC pellets were cultured in basal medium (BM), chondrogenic medium (CM), and CM-γ-PGA-supplemented medium (CM+γ-PGA) over a period of 21 days. Pellet size/shape was monitored with time. At 14 and 21 days of culture, the presence of sulfated glycosaminoglycans (sGAGs), type II collagen (Col II), Sox-9, aggrecan, type XI collagen (Col XI), type X collagen (Col X), calcium deposits, and type I collagen (Col I) was analyzed. After excluding γ-PGA's cytotoxicity, earlier cell condensation, higher sGAG content, Col II, Sox-9 (day 14), aggrecan, and Col X (day 14) production was observed in γ-PGA-supplemented MSC cultures, with no signs of mineralization or Col I. These effects were not evident with NCs. However, Sox-9 (at day 14) and Col X (at days 14 and 21) were increased, decreased, or absent, respectively. Overall, γ-PGA improved chondrogenic differentiation of MSCs, increasing ECM production earlier in culture. It is proposed that γ-PGA incorporation in novel biomaterials has a beneficial impact on future approaches for cartilage regeneration. PMID:25760236

Effect of corona electric field on the production of gamma-poly glutamic acid based on bacillus natto

NASA Astrophysics Data System (ADS)

Qi, Hong; Na, Ri; Xin, Jiletu; Jie Xie, Ya; Guo, Jiu Feng

2013-03-01

Bacillus Natto is an important strain for gamma-poly glutamic acid (γ-PGA) production. The mutagenesis of Bacillus Natto 20646 under corona electric field and the screening of high γ-PGA producing mutant were investigated. A new mutant bacillus natto Ndlz01 was isolated from Bacillus Natto 20646 after mutation in corona electric field at 9kV for 2min. The Ndlz01 exhibited genetic stability of high γ-PGA producing ability even after five generation cultures. When the bacterium was mutated in streamer discharge state at 9kV for 2min, its death rate was more than 90%. Compared with the yield of γ-PGA based on the original Bacillus Natto 20646, the γ-PGA yield of mutant bacillus natto Ndlz01 increased from 2.6 to 5.94 g/L, with an increase rate of 129.78%.

Characterization of Earthquake-Induced Ground Motion from the L'Aquila Seismic Sequence of 2009, Italy

NASA Astrophysics Data System (ADS)

Malagnini, L.; Akinci, A.; Mayeda, K. M.; Munafo', I.; Herrmann, R. B.; Mercuri, A.

2010-12-01

Based only on weak-motion data, we carried out a combined study on region-specific source scaling and crustal attenuation in the Central Apennines (Italy). Our goal was to obtain a reappraisal of the existing predictive relationships for the ground motion, and to test them against the strong-motion data (Peak Ground Acceleration, PGA, Peak Ground Velocity, PGV, and Spectral Acceleration, SA) gathered during the Mw 6.15 L’Aquila earthquake (April 6, 2009, 01:32 UTC). The L’Aquila main-shock was not part of the predictive study, and the validation test was an extrapolation to one magnitude unit above the largest earthquake of the calibration data set. The regional attenuation was determined through a set of regressions on a data set of 12,777 high-quality, high-gain waveforms with excellent S/N ratios (4,259 vertical, and 8,518 horizontal time histories). Seismograms were selected from the recordings of 170 fore-shocks and after-shocks of the sequence (the complete set of all earthquakes with ML ≥ 3.0, from October 1, 2008, to May 10, 2010). All waveforms were downloaded from the ISIDe web page (http://iside.rm.ingv.it/iside/standard/index.jsp), a web site maintained by the Istituto Nazionale di Geofisica e Vulcanologia (INGV). Weak-motion data were used to obtain a moment tensor solution, as well as a coda-based moment-rate source spectrum, for each one of the 170 events of the L’Aquila sequence (2.8 ≤ Mw ≤ 6.15). Source spectra were used to verify the good agreement with the source scaling of the Colfiorito seismic sequence of 1997-98 recently described by Malagnini et al. (2008). Finally, results on source excitation and crustal attenuation were used to produce the absolute site terms for the 23 stations located within ~ 80 km of the epicentral area. The complete set of spectral corrections (crustal attenuation and absolute site effects) was used to implement a fast and accurate tool for the automatic computation of moment magnitudes in the Central Apennines.

Poly (γ-glutamic acid)/beta-TCP nanocomposites via in situ copolymerization: Preparation and characterization.

PubMed

Shu, Xiu-Lin; Shi, Qing-Shan; Feng, Jin; Yang, Yun-Hua; Zhou, Gang; Li, Wen-Ru

2016-07-01

A series biodegradable poly (γ-glutamic acid)/beta-tricalcium phosphate (γ-PGA/TCP) nanocomposites were prepared which were composed of poly-γ-glutamic acid polymerized in situ with β-tricalcium phosphate and physiochemically characterized as bone graft substitutes. The particle size via dynamic light scattering, the direct morphological characterization via transmission electron microscopy and field emission scanning electron microscope, which showed that γ-PGA and β-TCP were combined compactly at 80℃, and the γ-PGA/TCP nanocomposites had homogenous and nano-sized grains with narrow particle size distributions. The water uptake and retention abilities, in vitro degradation properties, cytotoxicity in the simulated medium, and protein release of these novel γ-PGA/TCP composites were investigated. Cell proliferation in composites was nearly twice than β-TCP when checked in vitro using MC3T3 cell line. We also envision the potential use of γ-PGA/TCP systems in bone growth factor or orthopedic drug delivery applications in future bone tissue engineering applications. These observations suggest that the γ-PGA/TCP are novel nanocomposites with great potential for application in the field of bone tissue engineering. © The Author(s) 2016.

Deletion of genes involved in glutamate metabolism to improve poly-gamma-glutamic acid production in B. amyloliquefaciens LL3.

PubMed

Zhang, Wei; He, Yulian; Gao, Weixia; Feng, Jun; Cao, Mingfeng; Yang, Chao; Song, Cunjiang; Wang, Shufang

2015-02-01

Here, we attempted to elevate poly-gamma-glutamic acid (γ-PGA) production by modifying genes involved in glutamate metabolism in Bacillus amyloliquefaciens LL3. Products of rocR, rocG and gudB facilitate the conversion from glutamate to 2-oxoglutarate in Bacillus subtillis. The gene odhA is responsible for the synthesis of a component of the 2-oxoglutarate dehydrogenase complex that catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl coenzyme A. In-frame deletions of these four genes were performed. In shake flask experiments the gudB/rocG double mutant presented enhanced production of γ-PGA, a 38 % increase compared with wild type. When fermented in a 5-L fermenter with pH control, the γ-PGA yield of the rocR mutant was increased to 5.83 g/L from 4.55 g/L for shake flask experiments. The gudB/rocG double mutant produced 5.68 g/L γ-PGA compared with that of 4.03 g/L for the wild type, a 40 % increase. Those results indicated the possibility of improving γ-PGA production by modifying glutamate metabolism, and identified potential genetic targets to improve γ-PGA production.

Rapid purification and plasticization of D-glutamate-containing poly-γ-glutamate from Japanese fermented soybean food natto.

PubMed

Ashiuchi, Makoto; Oike, Shota; Hakuba, Hirofumi; Shibatani, Shigeo; Oka, Nogiho; Wakamatsu, Taisuke

2015-12-10

Poly-γ-glutamate (PGA) is a major component of mucilage derived from natto, a Japanese fermented food made from soybeans, and PGAs obtained under laboratory's conditions contain numerous d-glutamyl residues. Natto foods are thus promising as a source for nutritionally safe d-amino acids present in intact and digested polymers, although there is little information on the stereochemistry of PGA isolated directly from natto. Here, we describe the development of a new process for rapid purification of PGA using alum and determined the D-glutamate content of natto PGA by chiral high-performance liquid chromatographic analysis. Further, using hexadecylpyridinium cation (HDP(+)), which is a compound of toothpaste, we chemically transformed natto PGA into a new thermoplastic material, called DL-PGAIC. (1)H nuclear magnetic resonance and calorimetric measurements indicate that DL-PGAIC is a stoichiometric complex of natto PGA and HDP(+) with glass transition points of -16.8 °C and -3.1 °C. Then, DL-PGAIC began decomposing at 210°C, suggesting thermal stability suitable for use as a supramolecular soft plastic. Copyright © 2015 Elsevier B.V. All rights reserved.

Foreign-body reaction and the course of osteolysis after polyglycolide implants for fracture fixation: experimental study in sheep.

PubMed

Weiler, A; Helling, H J; Kirch, U; Zirbes, T K; Rehm, K E

1996-05-01

Foreign-body reaction to polyglycolide (PGA) implants has been described in man. Many animal experiments have verified the mechanical properties of fixation devices made from PGA, but a significant foreign-body reaction has not been described. We studied the effect of PGA rods in 12 sheep with standardised osteochondral fractures of the medial femoral condyle fixed with uncoloured, self-reinforced PGA rods (Biofix). Radiographs were taken at intervals ranging from two weeks to two years, and the sheep were killed at intervals ranging from six to 24 months. All knees were examined histologically. Eleven of the 12 fractures healed radiologically and histologically. Moderate to severe osteolysis was seen at four to six weeks with maximum changes at 12 weeks in ten animals. Six knees showed fistula-like connections between the implant site and the joint space. Three developed synovitis, one with inflammatory changes involving the whole cartilage and one with destruction of the medial condyle. Although in our study osteochondral fractures fixed with PGA rods healed reliably, there were frequent, significant foreign-body reactions. Caution is needed when considering the use of PGA fixation devices in vulnerable regions such as the knee.

Polyacetylene glycoside attenuates ischemic kidney injury by co-inhibiting inflammation, mitochondria dysfunction and lipotoxicity.

PubMed

Zhou, Yijie; Du, Dan; Liu, Shuyun; Zhao, Meng; Yuan, Yujia; Li, Lan; Chen, Younan; Lu, Yanrong; Cheng, Jingqiu; Liu, Jingping

2018-07-01

Ischemic acute kidney injury (AKI) is a serious clinical problem and no efficient therapeutics is available in clinic now. Natural polyacetylene glycosides (PGAs) had shown antioxidant and anti-inflammatory properties, but their effects on kidney injury have not been evaluated. This study aimed to investigate the protective effect of PGA on ischemic kidney injury in renal tubular epithelial cells (TECs) and mice. Hypoxic HK-2 cells and renal ischemia/reperfusion injury (IRI) mice were treated with PGA from Coreopsis tinctoria, and the cell viability, renal function, apoptosis, inflammation, mitochondrial injury, lipids metabolism were analyzed. In vitro results showed that PGA improved cell viability and reduced oxidative stress, pro-apoptotic/pro-inflammatory factors expression and NFκB activation in TECs under hypoxia/reperfusion (H/R). Moreover, PGA reduced mitochondria oxidative stress and improved ATP production, ΔΨm and mitochondria biogenesis, and inhibited lipids uptake, biosynthesis and accumulation in hypoxic TECs. In vivo, PGA significantly attenuated kidney injury and reduced blood urea nitrogen (BUN), serum creatinine (CREA) and urinary albumin (Alb), and increased creatinine clearance (CC) in IRI mice. PGA also decreased cell apoptosis, mitochondria oxidative stress, inflammatory response and lipid droplets accumulation, and promoted ATP generation in kidney of IRI mice. Our results proved that PGA ameliorated ischemic kidney injury via synergic anti-inflammation, mitochondria protection and anti-lipotoxicity actions, and it might be a promising multi-target therapy for ischemic AKI. Copyright © 2018. Published by Elsevier Inc.

Metabolome analysis reveals the effect of carbon catabolite control on the poly(γ-glutamic acid) biosynthesis of Bacillus licheniformis ATCC 9945.

PubMed

Mitsunaga, Hitoshi; Meissner, Lena; Palmen, Thomas; Bamba, Takeshi; Büchs, Jochen; Fukusaki, Eiichiro

2016-04-01

Poly(γ-glutamic acid) (PGA) is a polymer composed of L- and/or D-glutamic acids that is produced by Bacillus sp. Because the polymer has various features as water soluble, edible, non-toxic and so on, it has attracted attention as a candidate for many applications such as foods, cosmetics and so on. However, although it is well known that the intracellular metabolism of Bacillus sp. is mainly regulated by catabolite control, the effect of the catabolite control on the PGA producing Bacillus sp. is largely unknown. This study is the first report of metabolome analysis on the PGA producing Bacillus sp. that reveals the effect of carbon catabolite control on the metabolism of PGA producing Bacillus licheniformis ATCC 9945. Results showed that the cells cultivated in glycerol-containing medium showed higher PGA production than the cells in glucose-containing medium. Furthermore, metabolome analysis revealed that the activators of CcpA and CodY, global regulatory proteins of the intracellular metabolism, accumulated in the cells cultivated in glycerol-containing and glucose-containing medium, respectively, with CodY apparently inhibiting PGA production. Moreover, the cells seemed to produce glutamate from citrate and ammonium using glutamine synthetase/glutamate synthase. Pulsed addition of di-ammonium hydrogen citrate, as suggested by the metabolome result, was able to achieve the highest value so far for PGA production in B. licheniformis. Copyright © 2015 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.

A relay network of extracellular heme-binding proteins drives C. albicans iron acquisition from hemoglobin.

PubMed

Kuznets, Galit; Vigonsky, Elena; Weissman, Ziva; Lalli, Daniela; Gildor, Tsvia; Kauffman, Sarah J; Turano, Paola; Becker, Jeffrey; Lewinson, Oded; Kornitzer, Daniel

2014-10-01

Iron scavenging constitutes a crucial challenge for survival of pathogenic microorganisms in the iron-poor host environment. Candida albicans, like many microbial pathogens, is able to utilize iron from hemoglobin, the largest iron pool in the host's body. Rbt5 is an extracellular glycosylphosphatidylinositol (GPI)-anchored heme-binding protein of the CFEM family that facilitates heme-iron uptake by an unknown mechanism. Here, we characterize an additional C. albicans CFEM protein gene, PGA7, deletion of which elicits a more severe heme-iron utilization phenotype than deletion of RBT5. The virulence of the pga7-/- mutant is reduced in a mouse model of systemic infection, consistent with a requirement for heme-iron utilization for C. albicans pathogenicity. The Pga7 and Rbt5 proteins exhibit distinct cell wall attachment, and discrete localization within the cell envelope, with Rbt5 being more exposed than Pga7. Both proteins are shown here to efficiently extract heme from hemoglobin. Surprisingly, while Pga7 has a higher affinity for heme in vitro, we find that heme transfer can occur bi-directionally between Pga7 and Rbt5, supporting a model in which they cooperate in a heme-acquisition relay. Together, our data delineate the roles of Pga7 and Rbt5 in a cell surface protein network that transfers heme from extracellular hemoglobin to the endocytic pathway, and provide a paradigm for how receptors embedded in the cell wall matrix can mediate nutrient uptake across the fungal cell envelope.

Analysis of the relationship between the decrease in pH and accumulation of 3-phosphoglyceric acid in developing forespores of Bacillus species.

PubMed

Magill, N G; Cowan, A E; Leyva-Vazquez, M A; Brown, M; Koppel, D E; Setlow, P

1996-04-01

Analysis of the pH decrease and 3-phosphoglyceric acid (3PGA) accumulation in the forespore compartment of sporulating cells of Bacillus subtilis showed that the pH decrease of 1 to 1.2 units at approximately 4 h of sporulation preceded 3PGA accumulation, as observed previously in B. megaterium. These data, as well as analysis of the forespore pH decrease in asporogenous mutants of B. subtilis, indicated that sigma G-dependent forespore transcription, but not sigma K-dependent mother cell transcription, is required for the forespore pH decrease. Further analysis of these asporogenous mutants showed an excellent correlation between the forespore pH decrease and the forespore's accumulation of 3PGA. These latter results are consistent with our previous suggestion that the decrease in forespore pH results in greatly decreased activity of phosphoglycerate mutase in the forespore, which in turn leads to 3PGA accumulation. In further support of this suggestion, we found that (i) elevating the pH of developing forespores of B. megaterium resulted in rapid utilization of the forespore's 3PGA depot and (ii) increasing forespore levels of PGM approximately 10-fold in B. subtilis resulted in a large decrease in the spore's depot of 3PGA. The B. subtilis strain with a high phosphoglycerate mutase level sporulated, and the spores germinated and went through outgrowth normally, indicating that forespore accumulation of a large 3PGA depot is not essential for these processes.

Using Tectonic Tremor to Constrain Seismic-wave Attenuation in Cascadia

NASA Astrophysics Data System (ADS)

Littel, G.; Thomas, A.; Baltay, A.

2017-12-01

In addition to fast, seismic slip, many subduction zones also host slow, largely aseismic slip, accompanied by a weak seismic signal known as tectonic tremor. Tremor is a small amplitude, low-frequency seismic signal that originates at the plate interface, down-dip of where large earthquakes typically occur. The Cascadia subduction zone has not seen a large megathrust earthquake since 1700, yet its recurrence interval of 350-500 years motivates heightened interest in understanding the seismic hazard of the region. Of great importance is to understand the degree to which waves are attenuated as they leave the plate interface and travel towards populated regions of interest. Ground motion prediction equations (GMPEs) relate ground motion to a number of parameters, including earthquake magnitude, depth, style of faulting, and anelastic attenuation, and are typically determined empirically from earthquake ground motion recordings. In Cascadia, however, earthquakes of the moderate size typically used to constrain GMPEs occur relatively infrequently compared to tectonic tremor events, which, in contrast, occur periodically approximately every 10-19 months. Studies have shown that the abundant tectonic tremor in Cascadia, despite its small amplitudes, can be used to constrain seismic wave attenuation in GMPEs. Here we quantify seismic wave attenuation and determine its spatial variations in Cascadia by performing an inversion using tremor ground motion amplitudes, taken as peak ground acceleration (PGA) and peak ground velocity (PGV) from 1 min window waveforms of each individual tremor event. We estimate the anelastic attenuation parameter for varying regional sections along the Cascadia margin. Changes in seismic-wave attenuation along the Cascadia Subduction Zone could result in significantly different ground motions in the event of a very large earthquake, hence quantifying attenuation may help to better estimate the severity of shaking in densely populated metropolitan areas such as Vancouver, Seattle and Portland.

Understanding the magnitude dependence of PGA and PGV in NGA-West 2 data

USGS Publications Warehouse

Baltay, Annemarie S.; Hanks, Thomas C.

2014-01-01

The Next Generation Attenuation‐West 2 (NGA‐West 2) 2014 ground‐motion prediction equations (GMPEs) model ground motions as a function of magnitude and distance, using empirically derived coefficients (e.g., Bozorgniaet al., 2014); as such, these GMPEs do not clearly employ earthquake source parameters beyond moment magnitude (M) and focal mechanism. To better understand the magnitude‐dependent trends in the GMPEs, we build a comprehensive earthquake source‐based model to explain the magnitude dependence of peak ground acceleration and peak ground velocity in the NGA‐West 2 ground‐motion databases and GMPEs. Our model employs existing models (Hanks and McGuire, 1981; Boore, 1983, 1986; Anderson and Hough, 1984) that incorporate a point‐source Brune model, including a constant stress drop and the high‐frequency attenuation parameter κ0, random vibration theory, and a finite‐fault assumption at the large magnitudes to describe the data from magnitudes 3 to 8. We partition this range into four different magnitude regions, each of which has different functional dependences on M. Use of the four magnitude partitions separately allows greater understanding of what happens in any one subrange, as well as the limiting conditions between the subranges. This model provides a remarkably good fit to the NGA data for magnitudes from 3

IMPULSIVE ACCELERATION OF CORONAL MASS EJECTIONS. II. RELATION TO SOFT X-RAY FLARES AND FILAMENT ERUPTIONS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bein, B. M.; Berkebile-Stoiser, S.; Veronig, A. M.

2012-08-10

Using high time cadence images from the STEREO EUVI, COR1, and COR2 instruments, we derived detailed kinematics of the main acceleration stage for a sample of 95 coronal mass ejections (CMEs) in comparison with associated flares and filament eruptions. We found that CMEs associated with flares reveal on average significantly higher peak accelerations and lower acceleration phase durations, initiation heights, and heights, at which they reach their peak velocities and peak accelerations. This means that CMEs that are associated with flares are characterized by higher and more impulsive accelerations and originate from lower in the corona where the magnetic fieldmore » is stronger. For CMEs that are associated with filament eruptions we found only for the CME peak acceleration significantly lower values than for events that were not associated with filament eruptions. The flare rise time was found to be positively correlated with the CME acceleration duration and negatively correlated with the CME peak acceleration. For the majority of the events the CME acceleration starts before the flare onset (for 75% of the events) and the CME acceleration ends after the soft X-ray (SXR) peak time (for 77% of the events). In {approx}60% of the events, the time difference between the peak time of the flare SXR flux derivative and the peak time of the CME acceleration is smaller than {+-}5 minutes, which hints at a feedback relationship between the CME acceleration and the energy release in the associated flare due to magnetic reconnection.« less

Purification and characterization of gamma poly glutamic acid from newly Bacillus licheniformis NRC20.

PubMed

Tork, Sanaa E; Aly, Magda M; Alakilli, Saleha Y; Al-Seeni, Madeha N

2015-03-01

γ-poly glutamic acid (γ-PGA) has received considerable attention for pharmaceutical and biomedical applications. γ-PGA from the newly isolate Bacillus licheniformis NRC20 was purified and characterized using diffusion distance agar plate, mass spectrometry and thin layer chromatography. All analysis indicated that γ-PGA is a homopolymer composed of glutamic acid. Its molecular weight was determined to be 1266 kDa. It was composed of L- and D-glutamic acid residues. An amplicon of 3050 represents the γ-PGA-coding genes was obtained, sequenced and submitted in genbank database. Its amino acid sequence showed high similarity with that obtained from B. licheniformis strains. The bacterium NRC 20 was independent of L-glutamic acid but the polymer production enhanced when cultivated in medium containing L-glutamic acid as the sole nitrogen source. Finally we can conclude that γ-PGA production from B. licheniformis NRC20 has many promised applications in medicine, industry and nanotechnology. Copyright © 2014 Elsevier B.V. All rights reserved.

Efficient Expression of an Acidic Endo-polygalacturonase from Aspergillus niger and Its Application in Juice Production.

PubMed

Wang, Jiaojiao; Zhang, Yuhong; Qin, Xing; Gao, Lingyu; Han, Bin; Zhang, Deqing; Li, Jinyang; Huang, He; Zhang, Wei

2017-04-05

An endo-polygalacturonase gene (pga-zj5a) was cloned by reverse transcription from cDNAs synthesized from Aspergillus niger ZJ5 total RNA. The open reading frame of pga-zj5a was 1089 base pairs encoding 362 amino acids. Pga-zj5a lacking a signal peptide sequence was successfully amplified using A. niger ZJ5 cDNA as the template and was ligated into the pPIC9 vector. The resulting plasmid was transformed into competent cells of Pichia pastoris GS115 for heterologous expression. The polygalacturonase showed a maximum activity level of 10436 U/mL in the culture supernatant from a 3 L fermenter. Assays of enzymatic properties showed that the optimal pH and temperature of the recombinant PGA-ZJ5A were 4.5 and 40 °C, respectively. PGA-ZJ5A was effective in pear juice clarification, increased the volume of pear juice by 41.8%, and improved its light transmittance 3-fold.

High-molecular-weight polymers for protein crystallization: poly-γ-glutamic acid-based precipitants

PubMed Central

Hu, Ting-Chou; Korczyńska, Justyna; Smith, David K.; Brzozowski, Andrzej Marek

2008-01-01

Protein crystallization has been revolutionized by the intro­duction of high-throughput technologies, which have led to a speeding up of the process while simultaneously reducing the amount of protein sample necessary. Nonetheless, the chemistry dimension of protein crystallization has remained relatively undeveloped. Most crystallization screens are based on the same set of precipitants. To address this shortcoming, the development of new protein precipitants based on poly-γ-­glutamic acid (PGA) polymers with different molecular-weight ranges is reported here: PGA-LM (low molecular weight) of ∼400 kDa and PGA-HM (high molecular weight) of >1000 kDa. It is also demonstrated that protein precipitants can be expanded further to polymers with much higher molecular weight than those that are currently in use. Furthermore, the modification of PGA-like polymers by covalent attachments of glucosamine substantially improved their solubility without affecting their crystallization properties. Some preliminary PGA-based screens are presented here. PMID:18703844

Poly-γ-glutamic acid produced from Bacillus licheniformis CGMCC 2876 as a potential substitute for polyacrylamide in the sugarcane industry.

PubMed

Yan, Shan; Yao, Haosheng; Chen, Zhen; Zeng, Shengquan; Xi, Xi; Wang, Yuanpeng; He, Ning; Li, Qingbiao

2015-01-01

As an environmentally friendly and industrially useful biopolymer, poly-γ-glutamic acid (γ-PGA) from Bacillus licheniformis CGMCC 2876 was characterized by the high-resolution mass spectrometry and (1)H NMR. A flocculating activity of 11,474.47 U mL(-1) obtained with γ-PGA, and the effects of carbon sources, ions, and chemical properties (D-/L-composition and molecular weight) on the production and flocculating activity of γ-PGA were discussed. Being a bioflocculant in the sugar refinery process, the color and turbidity of the sugarcane juice was IU 1,877.36 and IU 341.41 with 0.8 ppm of γ-PGA, respectively, which was as good as the most widely used chemically synthesized flocculant in the sugarcane industry--polyacrylamide with 1 ppm. The γ-PGA produced from B. licheniformis CGMCC 2876 could be a promising alternate of chemically synthesized flocculants in the sugarcane industry. © 2015 American Institute of Chemical Engineers.

Intracellular synthesis of glutamic acid in Bacillus methylotrophicus SK19.001, a glutamate-independent poly(γ-glutamic acid)-producing strain.

PubMed

Peng, Yingyun; Zhang, Tao; Mu, Wanmeng; Miao, Ming; Jiang, Bo

2016-01-15

Bacillus methylotrophicus SK19.001 is a glutamate-independent strain that produces poly(γ-glutamic acid) (γ-PGA), a polymer of D- and L-glutamic acids that possesses applications in food, the environment, agriculture, etc. This study was undertaken to explore the synthetic pathway of intracellular L- and D-glutamic acid in SK19.001 by investigating the effects of tricarboxylic acid cycle intermediates and different amino acids as metabolic precursors on the production of γ-PGA and analyzing the activities of the enzymes involved in the synthesis of L- and D-glutamate. Tricarboxylic acid cycle intermediates and amino acids could participate in the synthesis of γ-PGA via independent pathways in SK19.001. L-Aspartate aminotransferase, L-glutaminase and L-glutamate synthase were the enzymatic sources of L-glutamate. Glutamate racemase was responsible for the formation of D-glutamate for the synthesis of γ-PGA, and the synthetase had stereoselectivity for glutamate substrate. The enzymatic sources of L-glutamate were investigated for the first time in the glutamate-independent γ-PGA-producing strain, and multiple enzymatic sources of L-glutamate were verified in SK19.001, which will benefit efforts to improve production of γ-PGA with metabolic engineering strategies. © 2015 Society of Chemical Industry.

The enhanced anti-tissue adhesive effect of injectable pluronic-HA hydrogel by poly(γ-glutamic acid).

PubMed

Kim, Manse; Hwang, Youngmin; Tae, Giyoong

2016-12-01

The stability of tissue barrier in physiological condition is a key factor to isolate the damaged site from adjacent tissue for anti-tissue adhesion. Although pluronic or pluronic-hyaluronic acid (HA) hydrogel as an injectable formulation can prevent tissue adhesion at the injection site, the anti-tissue adhesion effect is limited due to its poor stability. Herein, we prepared tissue barrier formulations composed of pluronic F127 (F127) and HA mixture (F127-HA) and the effect of the addition of poly(γ-glutamic acid) (PGA) was characterized. All of F127, HA, and F127-HA mixture showed the poor in vitro residence stability less than 3 days. However, by adding PGA into F127-HA mixture, their stability was significantly enhanced by the control of the molecular weight and concentration of PGA. Thus, F127-HA with 10wt% PGA (2000kDa) showed the long-term stability over 10 days. Similarly, the enhanced stability of F127-HA with PGA resulted in the enhanced and excellent in vivo anti-tissue adhesion effect, evidenced by histological analysis and grading of tissue adhesion. Therefore, F127-HA containing PGA could be applied as an efficient injectable tissue barrier for anti-tissue adhesion. Copyright © 2016 Elsevier B.V. All rights reserved.

Seismic Hazard Maps for the Maltese Archipelago: Preliminary Results

NASA Astrophysics Data System (ADS)

D'Amico, S.; Panzera, F.; Galea, P. M.

2013-12-01

The Maltese islands form an archipelago of three major islands lying in the Sicily channel at about 140 km south of Sicily and 300 km north of Libya. So far very few investigations have been carried out on seismicity around the Maltese islands and no maps of seismic hazard for the archipelago are available. Assessing the seismic hazard for the region is currently of prime interest for the near-future development of industrial and touristic facilities as well as for urban expansion. A culture of seismic risk awareness has never really been developed in the country, and the public perception is that the islands are relatively safe, and that any earthquake phenomena are mild and infrequent. However, the Archipelago has been struck by several moderate/large events. Although recent constructions of a certain structural and strategic importance have been built according to high engineering standards, the same probably cannot be said for all residential buildings, many higher than 3 storeys, which have mushroomed rapidly in recent years. Such buildings are mostly of unreinforced masonry, with heavy concrete floor slabs, which are known to be highly vulnerable to even moderate ground shaking. We can surely state that in this context planning and design should be based on available national hazard maps. Unfortunately, these kinds of maps are not available for the Maltese islands. In this paper we attempt to compute a first and preliminary probabilistic seismic hazard assessment of the Maltese islands in terms of Peak Ground Acceleration (PGA) and Spectral Acceleration (SA) at different periods. Seismic hazard has been computed using the Esteva-Cornell (1968) approach which is the most widely utilized probabilistic method. It is a zone-dependent approach: seismotectonic and geological data are used coupled with earthquake catalogues to identify seismogenic zones within which earthquakes occur at certain rates. Therefore the earthquake catalogues can be reduced to the activity rate, the b-value of the Gutenberg-Richter relationship and an estimate of the maximum magnitude. In this article we also defined a new seismogenic zones in the central Mediterranean never considered before. In order to determine the ground motion parameters related to a specified probability of exceedance, the above statistical parameters are combined with ground motion prediction equations. Seismic hazard computations have been performed within the island boundaries. The preliminary maps for PGA distribution on rock site obtained for a 10% probability of exceedance shows values ranging between 0.09-0.18 g whereas, SA for 0.2, 04, 1.0 s show values of about 0.21-0.40 g, 0.14-0.24 g and 0.05-0.08 g respectively.

Photothermal-modulated drug delivery and magnetic relaxation based on collagen/poly(γ-glutamic acid) hydrogel.

PubMed

Cho, Sun-Hee; Kim, Ahreum; Shin, Woojung; Heo, Min Beom; Noh, Hyun Jong; Hong, Kwan Soo; Cho, Jee-Hyun; Lim, Yong Taik

2017-01-01

Injectable and stimuli-responsive hydrogels have attracted attention in molecular imaging and drug delivery because encapsulated diagnostic or therapeutic components in the hydrogel can be used to image or change the microenvironment of the injection site by controlling various stimuli such as enzymes, temperature, pH, and photonic energy. In this study, we developed a novel injectable and photoresponsive composite hydrogel composed of anticancer drugs, imaging contrast agents, bio-derived collagen, and multifaceted anionic polypeptide, poly (γ-glutamic acid) (γ-PGA). By the introduction of γ-PGA, the intrinsic temperature-dependent phase transition behavior of collagen was modified to a low viscous sol state at room temperature and nonflowing gel state around body temperature. The modified temperature-dependent phase transition behavior of collagen/γ-PGA hydrogels was also evaluated after loading of near-infrared (NIR) fluorophore, indocyanine green (ICG), which could transform absorbed NIR photonic energy into thermal energy. By taking advantage of the abundant carboxylate groups in γ-PGA, cationic-charged doxorubicin (Dox) and hydrophobic MnFe 2 O 4 magnetic nanoparticles were also incorporated successfully into the collagen/γ-PGA hydrogels. By illumination of NIR light on the collagen/γ-PGA/Dox/ICG/MnFe 2 O 4 hydrogels, the release kinetics of Dox and magnetic relaxation of MnFe 2 O 4 nanoparticles could be modulated. The experimental results suggest that the novel injectable and NIR-responsive collagen/γ-PGA hydrogels developed in this study can be used as a theranostic platform after loading of various molecular imaging probes and therapeutic components.

Branched chain amino acids maintain the molecular weight of poly(γ-glutamic acid) of Bacillus licheniformis ATCC 9945 during the fermentation.

PubMed

Mitsunaga, Hitoshi; Meissner, Lena; Büchs, Jochen; Fukusaki, Eiichiro

2016-10-01

Poly(γ-glutamic acid) mainly produced by Bacillus spp. is an industrially important compound due to several useful features. Among them, molecular weight is an important characteristic affecting on the physical properties such as viscosities and negative charge densities. However, it is difficult to control the molecular size of PGA since it decreases during fermentation. Previous study reported that PGA produced in the media containing different carbon sources such as glucose and glycerol showed differences in molecular weight. Therefore in this study, the effect of carbon source on the PGA molecular weight was examined; with the aim of developing a strategy to maintain the high molecular weight of PGA during fermentation. Our result showed that the weight average molecular weight (Mw) of PGA of Bacillus licheniformis ATCC 9945 cultivated in the media containing PTS-sugars were higher than the medium containing glycerol (non-PTS). The result of metabolome analysis indicated the possibility of CodY (a global regulator protein) activation in the cells cultivated in the media containing PTS-sugars. To mimic this effect, branched-chain amino acids (BCAAs), which are activators of CodY, were added to a medium containing glycerol. As the result, the Mw of PGA in the BCAAs-supplemented media were maintained and high during the early production phase compared to the non BCAAs-supplemented medium. These results indicate that BCAAs can repress the PGA molecular weight reduction during fermentation in B. licheniformis ATCC 9945. Copyright © 2016 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.

Improving survival of probiotic bacteria using bacterial poly-γ-glutamic acid.

PubMed

Bhat, A R; Irorere, V U; Bartlett, T; Hill, D; Kedia, G; Charalampopoulos, D; Nualkaekul, S; Radecka, I

2015-03-02

A major hurdle in producing a useful probiotic food product is bacterial survival during storage and ingestion. The aim of this study was to test the effect of γ-PGA immobilisation on the survival of probiotic bacteria when stored in acidic fruit juice. Fruit juices provide an alternative means of probiotic delivery, especially to lactose intolerant individuals. In addition, the survival of γ-PGA-immobilised cells in simulated gastric juice was also assessed. Bifidobacteria strains (Bifidobacteria longum, Bifidobacteria breve), immobilised on 2.5% γ-PGA, survived significantly better (P<0.05) in orange and pomegranate juice for 39 and 11 days respectively, compared to free cells. However, cells survived significantly better (P<0.05) when stored in orange juice compared to pomegranate juice. Moreover, both strains, when protected with 2.5% γ-PGA, survived in simulated gastric juice (pH2.0) with a marginal reduction (<0.47 log CFU/ml) or no significant reduction in viable cells after 4h, whereas free cells died within 2h. In conclusion, this research indicates that γ-PGA can be used to protect Bifidobacteria cells in fruit juice, and could also help improve the survival of cells as they pass through the harsh conditions of the gastrointestinal tract (GIT). Following our previous report on the use of γ-PGA as a cryoprotectant for probiotic bacteria, this research further suggests that γ-PGA could be used to improve probiotic survival during the various stages of preparation, storage and ingestion of probiotic cells. Copyright © 2014 Elsevier B.V. All rights reserved.

Adsorption of Rare Earths(Ⅲ) Using an Efficient Sodium Alginate Hydrogel Cross-Linked with Poly-γ-Glutamate

PubMed Central

Xu, Shuxia; Wang, Zhiwei; Gao, Yuqian; Zhang, Shimin; Wu, Kun

2015-01-01

With the exploitation of rare earth ore, more and more REEs came into groundwater. This was a waste of resources and could be harmful to the organisms. This study aimed to find an efficient adsorption material to mitigate the above issue. Through doping sodium alginate (SA) with poly-γ-glutamate (PGA), an immobilized gel particle material was produced. The composite exhibited excellent capacity for adsorbing rare earth elements (REEs). The amount of La3+ adsorbed on the SA-PGA gel particles reached approximately 163.93 mg/g compared to the 81.97 mg/g adsorbed on SA alone. The factors that potentially affected the adsorption efficiency of the SA-PGA composite, including the initial concentration of REEs, the adsorbent dosage, and the pH of the solution, were investigated. 15 types of REEs in single and mixed aqueous solutions were used to explore the selective adsorption of REEs on gel particles. Scanning electron microscopy (SEM) and Fourier transform infrared (FT-IR) spectroscopy analyses of the SA and SA-PGA gel beads suggested that the carboxyl groups in the composite might play a key role in the adsorption process and the morphology of SA-PGA changed from the compact structure of SA to a porous structure after doping PGA. The kinetics and thermodynamics of the adsorption of REEs were well fit with the pseudo-second-order equation and the Langmuir adsorption isotherm model, respectively. It appears that SA-PGA is useful for recycling REEs from wastewater. PMID:25996388

A Relay Network of Extracellular Heme-Binding Proteins Drives C. albicans Iron Acquisition from Hemoglobin

PubMed Central

Kuznets, Galit; Vigonsky, Elena; Weissman, Ziva; Lalli, Daniela; Gildor, Tsvia; Kauffman, Sarah J.; Turano, Paola; Becker, Jeffrey; Lewinson, Oded; Kornitzer, Daniel

2014-01-01

Iron scavenging constitutes a crucial challenge for survival of pathogenic microorganisms in the iron-poor host environment. Candida albicans, like many microbial pathogens, is able to utilize iron from hemoglobin, the largest iron pool in the host's body. Rbt5 is an extracellular glycosylphosphatidylinositol (GPI)-anchored heme-binding protein of the CFEM family that facilitates heme-iron uptake by an unknown mechanism. Here, we characterize an additional C. albicans CFEM protein gene, PGA7, deletion of which elicits a more severe heme-iron utilization phenotype than deletion of RBT5. The virulence of the pga7−/− mutant is reduced in a mouse model of systemic infection, consistent with a requirement for heme-iron utilization for C. albicans pathogenicity. The Pga7 and Rbt5 proteins exhibit distinct cell wall attachment, and discrete localization within the cell envelope, with Rbt5 being more exposed than Pga7. Both proteins are shown here to efficiently extract heme from hemoglobin. Surprisingly, while Pga7 has a higher affinity for heme in vitro, we find that heme transfer can occur bi-directionally between Pga7 and Rbt5, supporting a model in which they cooperate in a heme-acquisition relay. Together, our data delineate the roles of Pga7 and Rbt5 in a cell surface protein network that transfers heme from extracellular hemoglobin to the endocytic pathway, and provide a paradigm for how receptors embedded in the cell wall matrix can mediate nutrient uptake across the fungal cell envelope. PMID:25275454

Development and initial validation of the Localized Scleroderma Skin Damage Index and Physician Global Assessment of disease Damage: a proof-of-concept study

PubMed Central

Vilaiyuk, Soamarat; Torok, Kathryn S.; Medsger, Thomas A.

2010-01-01

Objective. To develop and assess the psychometric properties of the Localized Scleroderma (LS) Skin Damage Index (LoSDI) and Physician Global Assessment of disease Damage (PGA-D). Methods. Damage was defined as irreversible/persistent changes (>6 months) due to previous active disease/complications of therapy. Eight rheumatologists assessed the importance of 17 variables in formulating the PGA-D/LoSDI. LS patients were evaluated by two rheumatologists using both tools to assess their psychometric properties. LoSDI was calculated by summing three scores for cutaneous features of damage [dermal atrophy (DAT), subcutaneous atrophy (SAT) and dyspigmentation (DP)] measured at 18 anatomic sites. Patient GA of disease severity (PtGA-S), Children's Dermatology Life Quality Index (CDLQI) and PGA-D were recorded at the time of each examination. Results. Thirty LS patients (112 lesions) and nine patient-visit pairs (18 lesions) were included for inter- and intra-rater reliability study. LoSDI and its domains DAT, SAT, DP and PGA-D demonstrated excellent inter- and intra-rater reliability (reliability coefficients 0.86–0.99 and 0.74–0.96, respectively). LoSDI correlated moderately with PGA-D and poorly with PtGA-S and CDLQI. PGA-D correlated moderately with PtGA-S, but poorly with CDLQI. Conclusions. To complete the LS Cutaneous Assessment Tool (LoSCAT), we developed and evaluated the psychometric properties of the LoSDI and PGA-D in addition to the LS Skin Severity Index (LoSSI). These instruments will facilitate evaluation of LS patients for individual patient management and clinical trials. LoSDI and PGA-D demonstrated excellent reliability and high validity. LoSCAT provides an improved understanding of LS natural history. Further study in a larger group of patients is needed to confirm these preliminary findings. PMID:20008472

Site-specific Seismic Hazard Assessment to Establish Elastic Design Properties for Oman Museum-Across Ages, Manah, Sultante of Oman

NASA Astrophysics Data System (ADS)

El Hussain, I. W.

2017-12-01

The current study provides a site specific deterministic seismic hazard assessment (DSHA) at the selected site for establishing the Oman Museum-Across Ages at Manah area, as a part of a comprehensive geotechnical and seismological plan to design the facilities accordingly. The DSHA first defines the seismic sources that might influence the site and assesses the maximum possible earthquake magnitude for each of them. By assuming each of these maximum earthquakes to occur at a location placing them at the closest distances to the site, the ground motion is predicted utilizing empirical ground motion prediction equations. The local site effects are performed by determining the fundamental frequency of the soft soil using HVSR technique and by estimating amplification spectra using the soil characteristics (mainly shear-wave velocity). Shear-wave velocity has been evaluated using the MASW technique. The maximum amplification value of 2.1 at spectral period 0.06 sec is observed at the ground surface, while the largest amplification value at the top of the conglomerate layer (at 5m depth) is 1.6 for a spectral period of 0.04 Sec. The maximum median 5% damped peak ground acceleration is found to be 0.263g at a spectral period of 0.1 sec. Keywords: DSHA; Site Effects; HVSR; MASW; PGA; Spectral Period

Extraordinary distance limits of landslides triggered by the 2011 Mineral, Virginia, earthquake

USGS Publications Warehouse

Jibson, Randall W.; Harp, Edwin L.

2012-01-01

The 23 August 2011 Mineral, Virginia, earthquake (Mw 5.8) was the largest to strike the eastern U.S. since 1897 and was felt over an extraordinarily large area. Although no large landslides occurred, the shaking did trigger many rock and soil falls from steep river banks and natural cliffs in the epicentral area and from steep road cuts along, and northwest of, the Blue Ridge Parkway. We mapped the occurrence of rock falls to determine distance limits that could be compared with those from other documented earthquakes. Studies of previous earthquakes indicated a maximum epicentral distance limit for landsliding of ~60  km for an M 5.8 earthquake; the maximum distance limit for the 2011 earthquake was 245 km, the largest exceedance of the historical limit ever recorded. Likewise, the previous maximum area affected by landslides for this magnitude was 1500  km2; the area affected by landslides in the 2011 earthquake was 33,400  km2. These observations provide physical evidence that attenuation of strong shaking for eastern U.S. earthquakes is significantly lower than for plate‐boundary earthquakes. Also, distance limits parallel to the regional structural trend are greater than those that transect the structure, which suggests anisotropic attenuation related to the regional geologic structure. Peak ground acceleration (PGA) at the landslide distance limits is estimated to have been about 0.02–0.04g.

Comparing Newmark

NASA Astrophysics Data System (ADS)

Rodríguez-Peces, M. J.; García-Mayordomo, J.; Azañón-Hernández, J. M.; Jabaloy-Sánchez, A.

2009-04-01

The Lorca Basin (Eastern Betic Cordillera, SE Spain) is one of the most seismically active regions of Spain. In this area there are well known cases of earthquake-induced slope instabilities associated to specific earthquakes (e.g., Bullas 2002, La Paca 2005). Furthermore, this area is characterized by moderate magnitude seismicity which mainly produces rock-falls and avalanches. In this work we present the results of our research at regional and site scales. For the regional scale, we have used a geographic information system (GIS) to develop an implementation of the Newmark's sliding rigid block method. We have particularly proposed a new variation of Newmark's method to consider soil and topographic amplification effects. Subsequently, we produced "Newmark displacement" maps for both probabilistic and deterministic seismic scenarios in the Lorca Basin. Probabilistic seismic scenarios consider three hazard maps in terms of peak ground acceleration (PGA) on rock corresponding to the 475-, 975- and 2475-year return periods (exceedance probability of 10, 5 and 2% in 50 years, respectively) in the Murcia Region. Deterministic seismic scenarios consider the occurrence of the most probable earthquake for a 475-year return period (Mw=5.0) at every location, or either a complete rupture of Lorca-Totana (Mw=6.7) or Puerto Lumbreras-Lorca (Mw=6.8) segments of Alhama de Murcia Fault. The Newmark displacement maps allowed us to identify areas with the highest potential seismic hazard, and also locate areas for future particular studies. We have found that rock-falls produced during the last earthquakes in Lorca Basin (e.g., Bullas 2002, La Paca 2005) match very well with areas with values of Newmark displacement lower than 2 cm in all the seismic scenarios considered. Therefore, it seems that low values of Newmark displacements are very likely associated with rock-falls. To support this hypothesis we have applied the Newmark method at a site scale. To do this, we have selected La Paca rock-fall which was generated during La Paca 2005 earthquake (mbLg=4.7, IEMS=VI-VII). We have used a terrestrial laser scanner in order to obtain a high resolution digital elevation model of La Paca rock-fall area. Moreover, we have performed a back-analysis based on field data to estimate the static safety factor previous to the earthquake and the critical acceleration. Furthermore, we have selected a representative strong ground motion record for La Paca earthquake from international databases. The critical acceleration and the peak ground acceleration values obtained from the strong ground motion record allowed us to estimate the actual soil and topographic amplification effects. Finally, we have calculated analytically the real Newmark displacement at La Paca rock-fall and we have compared this displacement with our GIS estimation in order to improve the calibration of Newmark's method at the regional scale.

Source characterization of moderate induced earthquakes in Oklahoma, USA: A case study of 2013-2016 Cushing earthquake sequence

NASA Astrophysics Data System (ADS)

Ji, Chen; Archuleta, Ralph

2017-04-01

The significant increase of seismicity rate in the central and eastern United States since 2009 has drawn wide attention for the potential seismic hazard. Unfortunately, most of moderate earthquakes in this region lack near-fault strong motion records, limiting in-depth studies. The 2016/11/07 M 5.0 Cushing, Oklahoma earthquake and its fore/aftershock sequence, which was monitored by four strong motion stations within 10 km of the mainshock epicenter, is the only exception. According to Oklahoma Geological Survey, no M>1.5 earthquake occurred before 2013 within 5 km of the mainshock epicenter, but 110 foreshocks, including two M>4 events, had occurred before the mainshock initiation. The close-fault records also revealed that M>4 foreshocks and mainshock excited unusually high level of strong ground motion. For example, 2015/10/10 Mw 4.3 Cushing earthquake resulted in peak ground acceleration (PGA) and peak ground velocity (PGV) up to 0.6 g and 8.3 cm/s, respectively. Simply correcting the geometric spreading (1/R, R is hypocenter distance) leads to mean PGA and PGV of 0.2 g and 3.6 cm/s at R=10 km, which are 4-8 times of the average values inferred from NGA-West dataset (Archuleta and Ji, 2016). Here we constrain the slip history of Cushing mainshock and its M>4 foreshocks using strong motion waveforms and compare them with the results of other moderate Oklahoma earthquakes. Our preliminary analysis of the mainshock leads to a preferred model of heterogeneous dextral slip on a vertical fault plane orienting N60oE, with three major rupture stages. The rupture initiated at a depth of 4.1 km, within the "cloud" of foreshocks. The first subevent has a rupture duration of 0.7 s and accounts for 20% of total seismic moment (Mw 4.4). After a delay of 0.5 s, a slip patch just outside the foreshock "cloud" and 2-3 km away from the hypocenter broke. From 1.2 s to 1.7 s, 45% of total seismic moment (Mw 4.7) was quickly released. The rest of the seismic moment (35%, Mw 4.6) occurred in the shallower depths (<2 km) within the next 1.5 s. The inverted total seismic moment is 2.6x10^16 Nm (Mw 4.9) and the peak slip is about 0.4 m. The total rupture duration of the inverted model is 3.2 s, about twice the typical value of Mw 4.9 earthquakes. The peak static stress drop estimated using the slip model is 10 MPa, but the energy based average stress drop is only 2 MPa, slightly lower than typical tectonic earthquakes. We note that these rupture characteristics are similar to the results of 2011 Mw 5.6 Prague, Oklahoma earthquake (Sun and Hartzell, 2014). Both of them support the hypothesis that unlike the tectonic earthquakes that occur on mature faults and often have single predominant asperity, the induced moderate earthquakes in Oklahoma can be viewed as cascade ruptures on pre-mature fault planes with multiple isolated asperities close to failure. Such a hypothesis supports the argument that the damage from injection-induced earthquakes will be especially concentrated in the immediate epicentral region (Hough, 2014).

Artificial sensory organs: latest progress.

PubMed

Nakamura, Tatsuo; Inada, Yuji; Shigeno, Keiji

2018-03-01

This study introduces the latest progress on the study of artificial sensory organs, with a special emphasis on the clinical results of artificial nerves and the concept of in situ tissue engineering. Peripheral nerves have a strong potential for regeneration. An artificial nerve uses this potential to recover a damaged peripheral nerve. The polyglycolic acid collagen tube (PGA-C tube) is a bio-absorbable tube stuffed with collagen of multi-chamber structure that consists of thin collagen films. The clinical application of the PGA-C tube began in 2002 in Japan. The number of PGA-C tubes used is now beyond 300, and satisfactory results have been reported on peripheral nerve repairs. This PGA-C tube is also effective for patients suffering from neuropathic pain.

Hydrogel coated monoliths for enzymatic hydrolysis of penicillin G

PubMed Central

Smeltink, M. W.; Straathof, A. J. J.; Paasman, M. A.; van de Sandt, E. J. A. X.; Kapteijn, F.; Moulijn, J. A.

2008-01-01

The objective of this work was to develop a hydrogel-coated monolith for the entrapment of penicillin G acylase (E. coli, PGA). After screening of different hydrogels, chitosan was chosen as the carrier material for the preparation of monolithic biocatalysts. This protocol leads to active immobilized biocatalysts for the enzymatic hydrolysis of penicillin G (PenG). The monolithic biocatalyst was tested in a monolith loop reactor (MLR) and compared with conventional reactor systems using free PGA, and a commercially available immobilized PGA. The optimal immobilization protocol was found to be 5 g l−1 PGA, 1% chitosan, 1.1% glutaraldehyde and pH 7. Final PGA loading on glass plates was 29 mg ml−1 gel. For 400 cpsi monoliths, the final PGA loading on functionalized monoliths was 36 mg ml−1 gel. The observed volumetric reaction rate in the MLR was 0.79 mol s−1 m−3monolith. Apart from an initial drop in activity due to wash out of PGA at higher ionic strength, no decrease in activity was observed after five subsequent activity test runs. The storage stability of the biocatalysts is at least a month without loss of activity. Although the monolithic biocatalyst as used in the MLR is still outperformed by the current industrial catalyst (immobilized preparation of PGA, 4.5 mol s−1 m−3catalyst), the rate per gel volume is slightly higher for monolithic catalysts. Good activity and improved mechanical strength make the monolithic bioreactor an interesting alternative that deserves further investigation for this application. Although moderate internal diffusion limitations have been observed inside the gel beads and in the gel layer on the monolith channel, this is not the main reason for the large differences in reactor performance that were observed. The pH drop over the reactor as a result of the chosen method for pH control results in a decreased performance of both the MLR and the packed bed reactor compared to the batch system. A different reactor configuration including an optimal pH profile is required to increase the reactor performance. The monolithic stirrer reactor would be an interesting alternative to improve the performance of the monolith-PGA combination. PMID:18427849

Use of Nonspecific, Glutamic Acid-Free, Media and High Glycerol or High Amylase as Inducing Parameters for Screening Bacillus Isolates Having High Yield of Polyglutamic Acid

PubMed Central

Baxi, Nandita N.

2014-01-01

Out of fifty-five Bacillus isolates obtained from ten different regional locations and sources, seven showed the ability to consistently produce specific extracellular polymeric substance (EPS) on rich as well as synthetic but nonspecific media which did not contain glutamic acid. The isolates were identified as either Bacillus licheniformis or Bacillus subtilis. The EPS from all isolates was resistant to alpha protease, proteinase K, and was thus of high molecular weight. Further it was detected after SDS-PAGE by methylene blue but not by coomassie blue R staining as in case of proteins with high proportion of acidic amino acids. Cell-free EPS, after acid hydrolysis, showed absence of carbohydrates and presence of only glutamic acid. Thus the native the EPS from all seven isolates was confirmed to be gamma polyglutamic acid (PGA) and not exopolysaccharide. The Bacillus isolate T which produced maximum polymer on all media tested had higher amylase: protease activity as compared to other strains. If inoculum was developed in rich medium as compared to synthetic medium, the PGA produced increased by twofold in the subsequent synthetic production medium. Similarly, use of inoculum consisting of young and vegetative cells also increased the PGA production by twofold though amount of inoculum did not affect yield of PGA. Though PGA was produced in even in the absence of glutamic acid supplementation in the production medium by all isolates, the yield of PGA increased by fourfold in the presence glutamic acid and the maximum yield was 30 g/l for isolate K. The supplementation of glutamine instead of glutamic acid into the medium caused an increase in the viscosity of the non-Newtonian solution of PGA. PMID:27379328

Use of Nonspecific, Glutamic Acid-Free, Media and High Glycerol or High Amylase as Inducing Parameters for Screening Bacillus Isolates Having High Yield of Polyglutamic Acid.

PubMed

Baxi, Nandita N

2014-01-01

Out of fifty-five Bacillus isolates obtained from ten different regional locations and sources, seven showed the ability to consistently produce specific extracellular polymeric substance (EPS) on rich as well as synthetic but nonspecific media which did not contain glutamic acid. The isolates were identified as either Bacillus licheniformis or Bacillus subtilis. The EPS from all isolates was resistant to alpha protease, proteinase K, and was thus of high molecular weight. Further it was detected after SDS-PAGE by methylene blue but not by coomassie blue R staining as in case of proteins with high proportion of acidic amino acids. Cell-free EPS, after acid hydrolysis, showed absence of carbohydrates and presence of only glutamic acid. Thus the native the EPS from all seven isolates was confirmed to be gamma polyglutamic acid (PGA) and not exopolysaccharide. The Bacillus isolate T which produced maximum polymer on all media tested had higher amylase: protease activity as compared to other strains. If inoculum was developed in rich medium as compared to synthetic medium, the PGA produced increased by twofold in the subsequent synthetic production medium. Similarly, use of inoculum consisting of young and vegetative cells also increased the PGA production by twofold though amount of inoculum did not affect yield of PGA. Though PGA was produced in even in the absence of glutamic acid supplementation in the production medium by all isolates, the yield of PGA increased by fourfold in the presence glutamic acid and the maximum yield was 30 g/l for isolate K. The supplementation of glutamine instead of glutamic acid into the medium caused an increase in the viscosity of the non-Newtonian solution of PGA.

Bacteriomimetic poly-γ-glutamic acid surface coating for hemocompatibility and safety of nanomaterials.

PubMed

Shim, Gayong; Kim, Dongyoon; Kim, Jinyoung; Suh, Min Sung; Kim, Youn Kyu; Oh, Yu-Kyoung

2017-08-01

Poly-γ-glutamic acid (PGA), a major component of the bacterial capsule, is known to confer hydrophilicity to bacterial surfaces and protect bacteria from interactions with blood cells. We tested whether applying a bacteriomimetic surface coating of PGA modulates interactions of nanomaterials with blood cells or affects their safety and photothermal antitumor efficacy. Amphiphilic PGA (APGA), prepared by grafting phenylalanine residues to PGA, was used to anchor PGA to reduced graphene oxide (rGO) nanosheets, a model of hydrophobic nanomaterials. Surface coating of rGO with bacterial capsule-like APGA yielded APGA-tethered rGO nanosheets (ArGO). ArGO nanosheets remained stable in serum over 4 weeks, whereas rGO in plain form precipitated in serum within 5 minutes. Moreover, ArGO did not interact with blood cells, whereas rGO in plain form or as a physical mixture with PGA formed aggregates with blood cells. Mice administered ArGO at a dose of 50 mg/kg showed 100% survival and no hepatic or renal toxicity. No mice survived exposure at the same dose of rGO or a PGA/rGO mixture. Following intravenous administration, ArGO showed a greater distribution to tumors and prolonged tumor retention compared with other nanosheet formulations. Irradiation with near-infrared light completely ablated tumors in mice treated with ArGO. Our results indicate that a bacteriomimetic surface modification of nanomaterials with bacterial capsule-like APGA improves the stability in blood, biocompatibility, tumor distribution, and photothermal antitumor efficacy of rGO. Although APGA was used here to coat the surfaces of rGO, it could be applicable to coat surfaces of other hydrophobic nanomaterials.

Comparative studies on drug binding to the purified and pharmaceutical-grade human serum albumins: Bridging between basic research and clinical applications of albumin.

PubMed

Ashrafi-Kooshk, Mohammad Reza; Ebrahimi, Farangis; Ranjbar, Samira; Ghobadi, Sirous; Moradi, Nastaran; Khodarahmi, Reza

2015-09-01

Human serum albumin (HSA), the most abundant protein in blood plasma, is a monomeric multidomain protein that possesses an extraordinary capacity for binding, so that serves as a circulating depot for endogenous and exogenous compounds. During the heat sterilization process, the structure of pharmaceutical-grade HSA may change and some of its activities may be lost. In this study, to provide deeper insight on this issue, we investigated drug-binding and some physicochemical properties of purified albumin (PA) and pharmaceutical-grade albumin (PGA) using two known drugs (indomethacin and ibuprofen). PGA displayed significantly lower drug binding capacity compared to PA. Analysis of the quenching and thermodynamic parameters indicated that intermolecular interactions between the drugs and the proteins are different from each other. Surface hydrophobicity as well as the stability of PGA decreased compared to PA, also surface hydrophobicity of PA and PGA increased upon drugs binding. Also, kinetic analysis of pseudo-esterase activities indicated that Km and Vmax parameters for PGA enzymatic activity are more and less than those of PA, respectively. This in vitro study demonstrates that the specific drug binding of PGA is significantly reduced. Such studies can act as connecting bridge between basic research discoveries and clinical applications. Copyright © 2015 The International Alliance for Biological Standardization. Published by Elsevier Ltd. All rights reserved.

A case grafted with polyglycolic acid sheets and fibrin glue for protection after temporary resection of a metastatic cervical skin tumor.

PubMed

Matsuzuka, Takashi; Suzuki, Masahiro; Ikeda, Masakazu; Sato, Kaoru; Fujimoto, Junko; Hosaka, Rumi; Tanji, Yuko; Soeda, Shu; Murono, Shigeyuki

2018-04-01

The aim of this case report was to evaluate the usefulness of a grafting with polyglycolic acid sheet and a fibrin glue spray (PGA sheet grafting) after resection of a cervical skin tumor. A 61-year-old woman presented with left cervical skin tumor resistance to chemo-radiotherapy. She had been undergoing multimodal therapy for ovarian serous papillary adenocarcinoma for the previous six years. Although she had a poor general condition and a cervical skin tumor of 9cm in diameter, which was painful and easy bleeding, had offensive smell, she hoped to return to her job. Under local anesthesia, resection was performed, and PGA sheet grafting were used to shield the skin defect. After resection, she was relieved from pain, and could stay home without daily wound treatment. One and half months after resection, the wound was almost epithelialized. The PGA sheets consist of soft, elastic, nonwoven fabric made of PGA. In recent years, PGA sheet grafting has been widely used in the reconstruction and was chosen to shield the skin defect for this case. PGA sheet grafting after resection of cervical skin tumor can be an acceptable method for palliative care to relieve pain, bleeding, offensive smell, and ugly appearance. Copyright © 2017 Elsevier B.V. All rights reserved.

Polygalacturonase gene pgxB in Aspergillus niger is a virulence factor in apple fruit.

PubMed

Liu, Cheng-Qian; Hu, Kang-Di; Li, Ting-Ting; Yang, Ying; Yang, Feng; Li, Yan-Hong; Liu, He-Ping; Chen, Xiao-Yan; Zhang, Hua

2017-01-01

Aspergillus niger, a saprophytic fungus, is widely distributed in soil, air and cereals, and can cause postharvest diseases in fruit. Polygalacturonase (PG) is one of the main enzymes in fungal pathogens to degrade plant cell wall. To evaluate whether the deletion of an exo-polygalacturonase gene pgxB would influence fungal pathogenicity to fruit, pgxB gene was deleted in Aspergillus niger MA 70.15 (wild type) via homologous recombination. The ΔpgxB mutant showed similar growth behavior compared with the wild type. Pectin medium induced significant higher expression of all pectinase genes in both wild type and ΔpgxB in comparison to potato dextrose agar medium. However, the ΔpgxB mutant was less virulent on apple fruits as the necrosis diameter caused by ΔpgxB mutant was significantly smaller than that of wild type. Results of quantitive-PCR showed that, in the process of infection in apple fruit, gene expressions of polygalacturonase genes pgaI, pgaII, pgaA, pgaC, pgaD and pgaE were enhanced in ΔpgxB mutant in comparison to wild type. These results prove that, despite the increased gene expression of other polygalacturonase genes in ΔpgxB mutant, the lack of pgxB gene significantly reduced the virulence of A. niger on apple fruit, suggesting that pgxB plays an important role in the infection process on the apple fruit.

The properties of gelatin-poly (gamma-glutamic acid) hydrogels as biological glues.

PubMed

Hsu, Shan-Hui; Lin, Chen-Huan

2007-01-01

The influence of the molecular weight and the type of gelatin (A or B), as well as the molecular weight of poly (gamma-glutamic acid) (gamma-PGA), on the properties of gelatin/gamma-PGA mixed bioadhesives were studied. The gelation of the system was enhanced by a crosslinker, 1-(3-dimethylaminopropyl)-3-(ethylcarbodiimide) hydrochloride (EDC). The gelation time of the bioadhesives was analyzed using rheological measurements. The results indicated that the type of gelatin was a critical factor in determining the gelation time of the biological glues. The mixed glues had greater bonding strength and smaller gelation times as the molecular weight of gamma-PGA or gelatin increased. The swelling ratio decreased and the denaturation temperature increased upon raising the EDC concentration, indicating a greater degree of crosslinking at higher EDC concentrations. The mixed glues crosslinked with various concentrations of EDC (1.7-2.5%) showed no cytotoxicity to fibroblasts. In addition, no significant inflammatory response was observed in the rat subcutaneous implantation. The bioadhesives based on gelatin/gamma-PGA remained at the site for 7 days while the fibrin glue had almost completely degraded. By choosing the appropriate gelatin type and higher molecular weight gamma-PGA in the mixtures, the gelatin/gamma-PGA biological glues could serve as soft tissue adhesives. Rheological characterization was essential in the evaluation of biological glues.

Primary Amenorrhea Associated with Hyperprolactinemia in Polyglandular Autoimmune Syndrome Type II: A Case Report.

PubMed

Cottas, Luiza Tizziotti; Borges, Maria de Fátima; Oliveira, Lívia Prata Santos; Resende, Ana Luísa Mantovani; Ataíde, Meire Soares; Resende, Elisabete Aparecida Mantovani Rodrigues

2018-06-27

Polyglandular autoimmune syndrome type II (PGA-II) is a rare immunoendocrinopathy syndrome characterized by the occurrence of autoimmune Addison disease along with diabetes mellitus type 1 and/or autoimmune thyroid disease. Here, we report the case of a 23-year-old female with PGA-II who was followed up at the dermatology and endocrinology clinics of the Universidade Federal do Triângulo Mineiro, located in the state of Minas Gerais, Brazil. First, the patient presented diffuse skin hyperpigmentation, vitiligo; and in sequence, due to vomiting, appetite and weight loss, hypoglycemia, amenorrhea, and galactorrhea, the patient was then diagnosed with PGA-II. The patient also presented intense hyperprolactinemia due to primary hypothyroidism. The late diagnosis of PGA-II is frequent because the disorder is uncommon and has non-specific clinical manifestations. This report emphasizes the significance of a timely diagnosis and appropriate treatment to reduce morbidity and mortality associated with these diseases, especially Addison disease. The present study reports a rare case of a patient with PGA-II with primary amenorrhea associated with hyperprolactinemia. Thieme Revinter Publicações Ltda Rio de Janeiro, Brazil.

Development of Jerusalem artichoke resource for efficient one-step fermentation of poly-(γ-glutamic acid) using a novel strain Bacillus amyloliquefaciens NX-2S.

PubMed

Qiu, Yibin; Sha, Yuanyuan; Zhang, Yatao; Xu, Zongqi; Li, Sha; Lei, Peng; Xu, Zheng; Feng, Xiaohai; Xu, Hong

2017-09-01

This study aimed to develop non-food fermentation for the cost-effective production of poly-(γ-glutamic acid) (γ-PGA) using a novel strain of Bacillus amyloliquefaciens NX-2S. The new isolate assimilated inulin more efficiently than other carbohydrates from Jerusalem artichoke, without hydrolytic treatment. To investigate the effect of inulin on γ-PGA production, the transcript levels of γ-PGA synthetase genes (pgsB, pgsC, pgsA), regulatory genes (comA, degQ, degS), and the glutamic acid biosynthesis gene (glnA) were analyzed; inulin addition upregulated these key genes. Without exogenous glutamate, strain NX-2S could produce 6.85±0.22g/L of γ-PGA during fermentation. Exogenous glutamate greatly enhances the γ-PGA yield (39.4±0.38g/L) and productivity (0.43±0.05g/L/h) in batch fermentation. Our study revealed a potential method of non-food fermentation to produce high-value products. Copyright © 2017. Published by Elsevier Ltd.

High-level exogenous glutamic acid-independent production of poly-(γ-glutamic acid) with organic acid addition in a new isolated Bacillus subtilis C10.

PubMed

Zhang, Huili; Zhu, Jianzhong; Zhu, Xiangcheng; Cai, Jin; Zhang, Anyi; Hong, Yizhi; Huang, Jin; Huang, Lei; Xu, Zhinan

2012-07-01

A new exogenous glutamic acid-independent γ-PGA producing strain was isolated and characterized as Bacillus subtilis C10. The factors influencing the endogenous glutamic acid supply and the biosynthesis of γ-PGA in this strain were investigated. The results indicated that citric acid and oxalic acid showed the significant capability to support the overproduction of γ-PGA. This stimulated increase of γ-PGA biosynthesis by citric acid or oxalic acid was further proved in the 10 L fermentor. To understand the possible mechanism contributing to the improved γ-PGA production, the activities of four key intracellular enzymes were measured, and the possible carbon fluxes were proposed. The result indicated that the enhanced level of pyruvate dehydrogenase (PDH) activity caused by oxalic acid was important for glutamic acid synthesized de novo from glucose. Moreover, isocitrate dehydrogenase (ICDH) and glutamate dehydrogenase (GDH) were the positive regulators of glutamic acid biosynthesis, while 2-oxoglutarate dehydrogenase complex (ODHC) was the negative one. Copyright © 2012 Elsevier Ltd. All rights reserved.

Improvement of poly-γ-glutamic acid biosynthesis in a moving bed biofilm reactor by Bacillus subtilis NX-2.

PubMed

Jiang, Yongxiang; Tang, Bao; Xu, Zongqi; Liu, Kun; Xu, Zheng; Feng, Xiaohai; Xu, Hong

2016-10-01

The production of poly-γ-glutamic acid (γ-PGA) by Bacillus subtilis NX-2 using a moving bed biofilm reactor (MBBR) system was tested for the first time in this study. Polypropylene TL-2 was chosen as a suitable carrier, and γ-PGA concentration of 42.7±0.86g/L and productivity of 0.59±0.06g/(Lh) were obtained in batch fermentation. After application of the strategy of dissolved oxygen (DO)-stat feeding, higher γ-PGA concentration and productivity were achieved than with glucose feedback feeding. Finally, the repeated fed-batch cultures implemented in the MBBR system showed high stability, and the maximal γ-PGA concentration and productivity of 74.2g/L and 1.24g/(Lh) were achieved, respectively. In addition, the promotion of oxygen transfer by an MBBR carrier was well explained by a computational fluid dynamics (CFD) simulation. These results suggest that an MBBR system could be applied to large-scale γ-PGA production. Copyright © 2016 Elsevier Ltd. All rights reserved.

γ-PGA and MTGase improve the formation of ε-(γ-glutamyl) lysine cross-links within hairtail (Trichiurus haumela) surimi protein.

PubMed

Hu, Yaqin; Shao, Ying; Wu, Chunhua; Yuan, Chunhong; Ishimura, Gakushi; Liu, Wenjuan; Chen, Shiguo

2018-03-01

The present study investigated the mechanism of ε-(γ-glutamyl) lysine cross-links within hairtail (Trichiurus haumela) surimi protein via γ-polyglutamic acid (γ-PGA) and MTGase. The results indicated that the addition of MTGase and γ-PGA markedly improved the gelation properties of hairtail surimi protein, including its maximum breaking force and deformation, water holding capacity and gel strength. The maximum improvements were achieved by adding 0.5units MTGase/g meat paste in combination with 0.06% γ-PGA. SDS-PAGE showed that the band intensity of cross-linked proteins increased, whereas that of myosin heavy chain decreased after treatments. Further scanning electron microscopy (SEM) analysis showed the formation of a denser gel matrix, which was caused by much stronger and more inter- and intra-molecular cross-linking of proteins, via MTGase catalysing ε-(γ-glutamyl) lysine cross-links formed between lysine residues in the gel protein and glutamic residues in the hydrolytic γ-PGA. The results provide reliable guidance for the improvement of hairtail surimi protein gelation properties. Copyright © 2017 Elsevier Ltd. All rights reserved.

L-pyroglutamic acid protects rat cortical neurons against sodium glutamate-induced injury.

PubMed

Xiao, X Q; Liu, G Q

1999-08-01

To evaluate the effects of L-pyroglutamic acid (L-PGA, L-5-oxo-2-pyrrolidinecaroxylic acid) on sodium glutamate-induced neurotoxicity in rat cortical neurons. In primary cortical cultures from 16-d-old fetal rat, neuronal viability and contents of nitrite in the bathing medium after transient exposure to sodium glutamate (Glu) were measured; with Fura 2-AM as an intracellular calcium indicator, AR-CM-MIC cation measurement system was used to examine cytosolic free calcium ([Ca2+]i). L-PGA 10-80 mumol.L-1, inhibited Glu (500 mumol.L-1)-induced neuronal loss in a concentration-dependent manner with IC50 value of (41 +/- 9) mumol.L-1 (95% confidence limits: 30.3-54.7 mumol.L-1). L-PGA also attenuated Glu-induced NO release. L-PGA 1, 3, 10, 30, and 100 mumol.L-1 depressed Glu-caused [Ca2+]i elevation by 20.5%, 34.4%, 47.7%, 70.6%, and 80.4%, respectively. L-PGA protects cortical neurons against Glu-induced neurotoxity which may be related to inhibition of NO formation or suppression of the rise in [Ca2+]i.

The Commercial TREMOR Strong-Motion Seismograph

NASA Astrophysics Data System (ADS)

Evans, J. R.; Hamstra, R. H.; Kuendig, C.; Camina, P.

2001-12-01

The emergence of major seismological and earthquake-engineering problems requiring large, dense instrument arrays led several of us to investigate alternate solutions. Evans and Rogers (USGS Open File Report 95-555, 1995) and Evans (USGS Open File Report 98-109, 1998) demonstrated the efficacy of low-cost robust silicon accelerometers in strong-motion seismology, making possible a vast increase in the spatial density of such arrays. The 1998 design displays true 16-bit performance and excellent robustness and linearity---13 of these prototype near-real-time instruments are deployed in Oakland, California, and have recorded data from seven small events (up to 5.7 %g). Since this technology is a radical departure from past efforts, it was necessary for the USGS to develop the sensor and demonstrate its efficacy thoroughly. Since it is neither practical nor appropriate for the USGS to produce instrumentation beyond a demonstration phase, the US Geological Survey and GeoSIG Ltd undertook a collaborative effort (a ``CRAD'') to commercialize the new technology. This effort has resulted in a fully temperature-compensated 16-bit system, the GeoSIG GT-316, announced in April, 2001, combining the ICS-3028 TM-based USGS sensor, temperature compensation technique, and peak ground velocity (PGV) computation with a highly customized 16-bit GeoSIG recorder. The price has not been set but is likely to be around \\2000 in large quantities. The result is a near-real-time instrument telemetering peak ground acceleration (PGA) and PGV about 90 s after onset of the P wave, then minutes later transmitting the waveform. The receiving software, ``HomeBase()'', also computes spectral acceleration, S_{a}. PGA, PGV, S_{a}, and waveforms are forwarded immediately by HomeBase() for ShakeMap generation and other uses. Shaking metrics from the prototypes in Oakland are consistently among the first to arrive for the northern California ShakeMap. For telemetry we use a low-cost always-connected cell-phone-based Internet technology (CDPD), but any RS-232 connected telemetry system is a viable candidate (spread spectrum, CDMA, GSM, POT). The instruments can be synchronized via CDPD to a few tenths of a second, or to full precision with an optional GPS receiver. Sensor RMS noise is 33 \\mathrm \\mu g over the band 0.1 to 35 Hz, 11 \\mathrm \\mu g$ over the band 0.1 to 1.0 Hz; the sensor is extremely linear (far better than 1% of full scale); temperature compensation is to better than 1% of full scale. TREMOR-class instruments are intended to fill the niche of high spatial resolution with an economical low-maintenance device, while conventional instruments continue to pursue maximum amplitude resolution. The TREMOR instrument also has applications in areas where budget or access limitations require lower purchase, installation, or maintenance cost (commercial ANSS partners, remote sites, on-call aftershock arrays, extremely dense arrays, and organizations with limited budgets). However, we primarily envision large, mixed arrays of conventional and TREMOR instruments in urban areas, the former providing better early information from small events and the TREMOR instruments guaranteeing better spatial resolution and more near-field recording of large events. Together, they would meet the ANSS goal of dense near-real-time urban monitoring and the collection of requisite data for risk mitigation.

Characterization and Bioactivity Evaluation of (Polyetheretherketone/Polyglycolicacid)-Hydroyapatite Scaffolds for Tissue Regeneration

PubMed Central

Shuai, Cijun; Shuai, Chenying; Wu, Ping; Yuan, Fulai; Feng, Pei; Yang, Youwen; Guo, Wang; Fan, Xiaohan; Su, Ting; Peng, Shuping; Gao, Chengde

2016-01-01

Bioactivity and biocompatibility are crucial for tissue engineering scaffolds. In this study, hydroxyapatite (HAP) was incorporated into polyetheretherketone/polyglycolicacid (PEEK/PGA) hybrid to improve its biological properties, and the composite scaffolds were developed via selective laser sintering (SLS). The effects of HAP on physical and chemical properties of the composite scaffolds were investigated. The results demonstrated that HAP particles were distributed evenly in PEEK/PGA matrix when its content was no more than 10 wt %. Furthermore, the apatite-forming ability became better with increasing HAP content after immersing in simulated body fluid (SBF). Meanwhile, the composite scaffolds presented a greater degree of cell attachment and proliferation than PEEK/PGA scaffolds. These results highlighted the potential of (PEEK/PGA)-HAP scaffolds for tissue regeneration. PMID:28774058

Microbial production of poly-γ-glutamic acid.

PubMed

Sirisansaneeyakul, Sarote; Cao, Mingfeng; Kongklom, Nuttawut; Chuensangjun, Chaniga; Shi, Zhongping; Chisti, Yusuf

2017-09-05

Poly-γ-glutamic acid (γ-PGA) is a natural, biodegradable and water-soluble biopolymer of glutamic acid. This review is focused on nonrecombinant microbial production of γ-PGA via fermentation processes. In view of its commercial importance, the emphasis is on L-glutamic acid independent producers (i.e. microorganisms that do not require feeding with the relatively expensive amino acid L-glutamic acid to produce γ-PGA), but glutamic acid dependent production is discussed for comparison. Strategies for improving production, reducing costs and using renewable feedstocks are discussed.

Efficacy and tolerability of brinzolamide/brimonidine suspension and prostaglandin analogs in patients previously treated with dorzolamide/timolol solution and prostaglandin analogs.

PubMed

Lo, Jonathan S; Pang, Pierre M; Lo, Samuel C

2016-01-01

Fixed combination glaucoma medication is increasingly used in glaucoma treatment. There is a lack of comparative study in the literature of non-beta blocker combination agents used adjunctively with a glaucoma agent in a different class. The objective of this study is to evaluate the effect of intraocular pressure (IOP) control and tolerability of non-beta blocker combination suspension with prostaglandin analogs (PGA) in patients with open angle glaucoma who were previously treated with beta blocker combination solution with PGA. Open-label retrospective review of patient records. This study looked at patients with open angle glaucoma taking dorzolamide/timolol solution with PGA that were switched to brinzolamide/brimonidine combination suspension with PGA. This study reviewed the charts of all patients who were at least 21 years old with a clinical diagnosis of open-angle glaucoma or ocular hypertension in at least one eye. Patients needed to have been treated with concomitant use of PGA and dorzolamide/timolol solution for at least one month. Patients using dorzolamide/timolol solution plus PGA with medication related ocular irritation were switched to brinzolamide/brimonidine suspension with the same PGA. Best-corrected visual acuity, ocular hyperemia grading, slit lamp biomicroscopy and Goldmann applanation tonometry measurements, and patient medication preferences were assessed at baseline, 1 month and 3 months. Forty eyes with open angle glaucoma. The mean age of the patients was 68 and 60% were females. The IOP before the switch was 17.2 and 16.5 (P=0.70) following the switch at 3 months. We found a decreasing trend of ocular hyperemia (P=0.064) and strong preference (P=0.011) for non-beta blocker combination suspension but no difference of visual acuity and slit lamp findings. Brinzolamide/brimonidine combination suspension when used adjunctively with PGA is equally effective. Patients in this study reported greatly reduced ocular redness and shorter duration of stinging with non-beta blocker combination suspension. Their preference of it over dorzolamide/timolol combination solution makes it a viable treatment option, particularly for the aging glaucoma patient with comorbidities that restrict the beta blocker use.

Investigation of poly(γ-glutamic acid) production via online determination of viscosity and oxygen transfer rate in shake flasks.

PubMed

Regestein Née Meissner, Lena; Arndt, Julia; Palmen, Thomas G; Jestel, Tim; Mitsunaga, Hitoshi; Fukusaki, Eiichiro; Büchs, Jochen

2017-01-01

Poly(γ-glutamic acid) (γ-PGA) is a biopolymer with many useful properties making it applicable for instance in food and skin care industries, in wastewater treatment, in biodegradable plastics or in the pharmaceutical industry. γ-PGA is usually produced microbially by different Bacillus spp. The produced γ-PGA increases the viscosity of the fermentation broth. In case of shake flask fermentations, this results in an increase of the volumetric power input. The power input in shake flasks can be determined by measuring the torque of an orbitally rotating lab shaker. The online measurement of the volumetric power input enables to continuously monitor the formation or degradation of viscous products like γ-PGA. Combined with the online measurement of the oxygen transfer rate (OTR), the respiration activity of the organisms can be observed at the same time. Two different Bacillus licheniformis strains and three medium compositions were investigated using online volumetric power input and OTR measurements as well as thorough offline analysis. The online volumetric power input measurement clearly depicted changes in γ-PGA formation due to different medium compositions as well as differences in the production behavior of the two investigated strains. A higher citric acid concentration and the addition of trace elements to the standard medium showed a positive influence on γ-PGA production. The online power input signal was used to derive an online viscosity signal which was validated with offline determined viscosity values. The online measurement of the OTR proved to be a valuable tool to follow the respiration activity of the cultivated strains and to determine its reproducibility under different cultivation conditions. The combination of the volumetric power input and the OTR allows for an easy and reliable investigation of new strains, cultivation conditions and medium compositions for their potential in γ-PGA production. The power input signal and the derived online viscosity directly reflect changes in γ-PGA molecular weight and concentration, respectively, due to different cultivation conditions or production strains.

Chitosan/polyanion surface modification of styrene-butadiene-styrene block copolymer membrane for wound dressing.

PubMed

Yang, Jen Ming; Yang, Jhe-Hao; Huang, Huei Tsz

2014-01-01

The surface of styrene-butadiene-styrene block copolymer (SBS) membrane is modified with tri-steps in this study. At first, two step modified SBS membrane (MSBS) was prepared with epoxidation and ring opening reaction with maleated ionomer. Then chitosan was used as the polycation electrolyte and sodium alginate, poly(γ-glutamic acid) (PGA) and poly(aspartic acid) (PAsp) were selected as polyanion electrolytes to deposit on the surfaces of MSBS membrane by the layer-by-layer self-assembly (LbL) deposition technique to get three [chitosan/polyanion] LbL modified SBS membranes, ([CS/Alg], [CS/PGA] and [CS/PAsp]). From the quantitative XPS analysis and water contact angle measurement, it is found that the order of wettability and the content of functional group percentages of COO(-) and OCN on the three [CS/polyanion] systems are [CS/Alg]>[CS/PGA]>[CS/PAsp]. Performances of water vapor transmission rates, fibronectin adsorption, antibacterial assessment and 3T3 fibroblast cell growth on [CS/Alg], [CS/PGA] and [CS/PAsp] membranes were also evaluated. With the evaluation of water vapor transmission rate, these [CS/Alg], [CS/PGA] and [CS/PAsp] membranes are sterile semipermeable with water evaporation at about 82±8g/day·m(2). It is found that the amount of fibronectin adsorption on the three [CS/polyanion] systems is significantly determined by the sum of the functional group of COO(-) and OCN on the surfaces of [CS/Alg], [CS/PGA] and [CS/PAsp] systems. The results are inverse with the sum of the functional group of COO(-) and OCN on the three [CS/polyanion]. From the cytotoxicity test and cell adhesion and proliferation assay of 3T3 fibroblasts on the three [CS/polyanion] systems, it revealed that the cells not only remained viable but they also proliferated on the surfaces of [CS/Alg], [CS/PGA] and [CS/PAsp]. The bactericidal activity was found on [CS/Alg], [CS/PGA] and [CS/PAsp]. The transport of bacterial through these [CS/polyanion] membranes was also conducted. No bacterial transport was found. © 2013.

Comparative Analysis of Peak Ground Acceleration Before and After Padang Earthquake 2009 Using Mc. Guirre Method

NASA Astrophysics Data System (ADS)

Ayu Rahmalia, Diah; Nilamprasasti, Hesti

2017-04-01

We have analyzed the earthquakes data in West Sumatra province to determine peak ground acceleration value. The peak ground acceleration is a parameter that describes the strength of the tremor that ever happened. This paper aims to compare the value of the peak ground acceleration by considering the b-value before and after the Padang earthquake 2009. This research was carried out in stages, starting by taking the earthquake data in West Sumatra province with boundary coordinates 0.923° LU - 2.811° LS and 97.075° - 102.261° BT, before and after the 2009 Padang earthquake with a magnitude ≥ 3 and depth of ≤ 300 km, calculation of the b-value, and ended by creating peak ground acceleration map based on Mc. Guirre empirical formula with Excel and Surfer software. Based on earthquake data from 2002 until before Padang earthquake 2009, the b-value is 0.874 while the b-value after the Padang earthquake in 2009 to 2016 is 0.891. Considering b value, it can be known that peak ground acceleration before and after the 2009 Padang earthquake might be different. Based on the seismic data before 2009, the peak ground acceleration value of West Sumatra province is ranged from 7,002 to 308.875 gal. This value will be compared by the value of the peak ground acceleration after the Padang earthquake in 2009 which ranged from 7,946 to 372,736 gal.

[Effect of vibrational factors on the evaluation of whole-body vibrational intensity].

PubMed

Suzuki, H

1997-12-01

The aim of this study is to obtain basic data useful to evaluate the riding comfort of railway vehicles. The apparatus used in the present experiment made it possible to simulate various vibrations of railway vehicles. Twenty-two adult subjects participated in this experiment. They were exposed to lateral vibration with varying peak and root mean square (rms) accelerations and frequencies. The types and ranges of vibrations used in this experiment approximated to the typical vibrations of railway vehicles. The subjects were asked to rate the intensity of each vibration given to them successively, using the 7-step rating scale. Results indicated that both peak and rms accelerations significantly affected for the evaluation, although the effect of frequency was not significant. As for interactions, it was found that there were significant interacting effects between frequency and peak acceleration, between frequency and rms acceleration, and between peak and rms accelerations. It was also found that the relationship between the rms acceleration and the evaluated score changed with varying peak accelerations.

The Seismicity of the Central Apennines Region Studied by Means of a Physics-Based Earthquake Simulator

NASA Astrophysics Data System (ADS)

Console, R.; Vannoli, P.; Carluccio, R.

2016-12-01

The application of a physics-based earthquake simulation algorithm to the central Apennines region, where the 24 August 2016 Amatrice earthquake occurred, allowed the compilation of a synthetic seismic catalog lasting 100 ky, and containing more than 500,000 M ≥ 4.0 events, without the limitations that real catalogs suffer in terms of completeness, homogeneity and time duration. The algorithm on which this simulator is based is constrained by several physical elements as: (a) an average slip rate for every single fault in the investigated fault systems, (b) the process of rupture growth and termination, leading to a self-organized earthquake magnitude distribution, and (c) interaction between earthquake sources, including small magnitude events. Events nucleated in one fault are allowed to expand into neighboring faults, even belonging to a different fault system, if they are separated by less than a given maximum distance. The seismogenic model upon which we applied the simulator code, was derived from the DISS 3.2.0 database (http://diss.rm.ingv.it/diss/), selecting all the fault systems that are recognized in the central Apennines region, for a total of 24 fault systems. The application of our simulation algorithm provides typical features in time, space and magnitude behavior of the seismicity, which are comparable with those of real observations. These features include long-term periodicity and clustering of strong earthquakes, and a realistic earthquake magnitude distribution departing from the linear Gutenberg-Richter distribution in the moderate and higher magnitude range. The statistical distribution of earthquakes with M ≥ 6.0 on single faults exhibits a fairly clear pseudo-periodic behavior, with a coefficient of variation Cv of the order of 0.3-0.6. We found in our synthetic catalog a clear trend of long-term acceleration of seismic activity preceding M ≥ 6.0 earthquakes and quiescence following those earthquakes. Lastly, as an example of a possible use of synthetic catalogs, an attenuation law was applied to all the events reported in the synthetic catalog for the production of maps showing the exceedence probability of given values of peak acceleration (PGA) on the territory under investigation. The application of a physics-based earthquake simulation algorithm to the central Apennines region, where the 24 August 2016 Amatrice earthquake occurred, allowed the compilation of a synthetic seismic catalog lasting 100 ky, and containing more than 500,000 M ≥ 4.0 events, without the limitations that real catalogs suffer in terms of completeness, homogeneity and time duration. The algorithm on which this simulator is based is constrained by several physical elements as: (a) an average slip rate for every single fault in the investigated fault systems, (b) the process of rupture growth and termination, leading to a self-organized earthquake magnitude distribution, and (c) interaction between earthquake sources, including small magnitude events. Events nucleated in one fault are allowed to expand into neighboring faults, even belonging to a different fault system, if they are separated by less than a given maximum distance. The seismogenic model upon which we applied the simulator code, was derived from the DISS 3.2.0 database (http://diss.rm.ingv.it/diss/), selecting all the fault systems that are recognized in the central Apennines region, for a total of 24 fault systems. The application of our simulation algorithm provides typical features in time, space and magnitude behavior of the seismicity, which are comparable with those of real observations. These features include long-term periodicity and clustering of strong earthquakes, and a realistic earthquake magnitude distribution departing from the linear Gutenberg-Richter distribution in the moderate and higher magnitude range. The statistical distribution of earthquakes with M ≥ 6.0 on single faults exhibits a fairly clear pseudo-periodic behavior, with a coefficient of variation Cv of the order of 0.3-0.6. We found in our synthetic catalog a clear trend of long-term acceleration of seismic activity preceding M ≥ 6.0 earthquakes and quiescence following those earthquakes. Lastly, as an example of a possible use of synthetic catalogs, an attenuation law was applied to all the events reported in the synthetic catalog for the production of maps showing the exceedence probability of given values of peak acceleration (PGA) on the territory under investigation.

Efficacy of Human Umbilical Stem Cells Cultured on Polylactic/ Polyglycolic Acid Membrane in the Treatment of Multiple Gingival Recession Defects: a Randomized Controlled Clinical Study

PubMed Central

Zanwar, Kushal; Kumar Ganji, Kiran; Bhongade, Manohar L

2017-01-01

Statement of the Problem: Recently allogenic mesenchymal stem cells are proposed to have multipotential progenitor cell capabilities to differentiate into cementoblasts, osteoblasts, and periodontal ligament fibroblasts. Purpose: The aim of the present study was to compare the efficacy of human umbilical stem cells cultured on polylactic acid (PLA), polyglycolic acid (PGA) membrane with PLA/PGA membrane alone in the treatment of multiple gingival recession defects. Materials and Method: A total number of 14 cases of multiple gingival recession (Miller’s Class I or II) located in the anterior region were randomly selected and divided into test (stem cells in combination with PLA/PGA membrane) and control group (PLA/PGA membrane alone). Clinical parameters including gingival recession, probing pocket depth, clinical attachment level, and width of keratinized gingiva were recorded at baseline, and at 6 months postoperative. Results: At baseline, there was 2.28 mm and 2.14mm mean gingival recession at 16 sites and 14 sites in test and control groups respectively. At 6 months post-surgery, test group showed 1.57 mm mean reduction of gingival recession indicating 66% root coverage, while the control group showed 1.24mm mean reduction of gingival recession indicating 57% root coverage. Conclusion: In the present study, the stem cell with PLA/PGA membrane showed significantly higher mean root coverage compared to only PLA/PGA membrane group. PMID:28620633

Polygalacturonase gene pgxB in Aspergillus niger is a virulence factor in apple fruit

PubMed Central

Yang, Ying; Yang, Feng; Li, Yan-Hong; Liu, He-Ping; Chen, Xiao-Yan

2017-01-01

Aspergillus niger, a saprophytic fungus, is widely distributed in soil, air and cereals, and can cause postharvest diseases in fruit. Polygalacturonase (PG) is one of the main enzymes in fungal pathogens to degrade plant cell wall. To evaluate whether the deletion of an exo-polygalacturonase gene pgxB would influence fungal pathogenicity to fruit, pgxB gene was deleted in Aspergillus niger MA 70.15 (wild type) via homologous recombination. The ΔpgxB mutant showed similar growth behavior compared with the wild type. Pectin medium induced significant higher expression of all pectinase genes in both wild type and ΔpgxB in comparison to potato dextrose agar medium. However, the ΔpgxB mutant was less virulent on apple fruits as the necrosis diameter caused by ΔpgxB mutant was significantly smaller than that of wild type. Results of quantitive-PCR showed that, in the process of infection in apple fruit, gene expressions of polygalacturonase genes pgaI, pgaII, pgaA, pgaC, pgaD and pgaE were enhanced in ΔpgxB mutant in comparison to wild type. These results prove that, despite the increased gene expression of other polygalacturonase genes in ΔpgxB mutant, the lack of pgxB gene significantly reduced the virulence of A. niger on apple fruit, suggesting that pgxB plays an important role in the infection process on the apple fruit. PMID:28257463

Evaluation of tensile strength of surgical synthetic absorbable suture materials: an in vitro study

PubMed Central

Ranganath, V.; Nichani, Ashish Sham

2013-01-01

Purpose The purpose of this study was to evaluate the tensile strength of surgical synthetic absorbable sutures over a period of 14 days under simulated oral conditions. Methods Three suture materials (polyglycolic acid [PGA], polyglactin [PG] 910, and poly (glycolide-co-є-caprolactone) [PGC]) were used in 4-0 and 5-0 gauges. 210 suture samples (35 of each material and gauge) were used. All of the samples were tested preimmersion and 1 hour and 1, 3, 7, 10, and 14 days postimmersion. The tensile strength of each suture material and gauge was assessed. The point of breakage and the resorption pattern of the sutures were also assessed. Results During the first 24 hours of immersion, all 4-0 and 5-0 samples of PGA, PG 910, and PGC maintained their initial tensile strength. At baseline (preimmersion), there was a statistically significant (P<0.001) difference in the tensile strengths between the 4-0 and 5-0 gauge of PGA, PG 910, and PGC. PGA 4-0 showed the highest tensile strength until day 10. At 7 days, all the 4-0 sutures of the three materials had maintained their tensile strength with PGA 4-0 having significantly greater (P=0.003) tensile strength compared to PG. Conclusions 4-0 sutures are stronger and have greater tensile strength than 5-0 sutures. The PGA 4-0 suture showed the highest tensile strength at the end of day 10. PMID:23837127

Proton magnetic resonance spectroscopy (MRS) in on-line game addiction

PubMed Central

Han, Doug Hyun; Lee, Young Sik; Shi, Xianfeng; Renshaw, Perry F.

2015-01-01

Recent brain imaging studies suggested that both the frontal and temporal cortices are important candidate areas for mediating the symptoms of internet addiction. We hypothesized that deficits of prefrontal and temporal cortical function in patients with on-line game addiction (PGA) would be reflected in decreased levels of N-acetyl aspartate (NAA) and cytosolic, choline containing compound (Cho). Seventy three young PGA and 38 age and sex matched healthy control subjects were recruited in the study. Structural MR and 1H MRS data were acquired using a 3.0 T MRI scanner. Voxels were sequentially placed in right frontal cortex and right medial temporal cortices. In the right frontal cortex, the levels of NAA in PGA were lower than those in healthy controls. In the medial temporal cortex, the levels of Cho in PGA participants were lower than those observed in healthy controls. The Young Internet Addiction Scale (YIAS) scores and perseverative responses in PGA were negatively correlated with the level of NAA in right frontal cortex. The Beck Depressive Inventory (BDI) scores in the PGA cohort were negatively correlated with Cho levels in the right temporal lobe. To the best of our knowledge, this is the first MRS study of individuals with on-line game addiction. Although, the subjects with on-line game addiction in the current study were free from psychiatric co-morbidity, patients with on-line game addiction appear to share characteristics with ADHD and MDD in terms of neurochemical changes in frontal and temporal cortices. PMID:25088284

Poly-N-acetylglucosamine mediates biofilm formation and antibiotic resistance in Actinobacillus pleuropneumoniae

PubMed Central

Izano, Era A.; Sadovskaya, Irina; Vinogradov, Evgeny; Mulks, Martha H.; Velliyagounder, Kabilan; Ragunath, Chandran; Kher, William B.; Ramasubbu, Narayanan; Jabbouri, Saïd; Perry, Malcolm B.; Kaplan, Jeffrey B.

2007-01-01

Most field isolates of the swine pathogen Actinobacillus pleuropneumoniae form tenacious biofilms on abiotic surfaces in vitro. We purified matrix polysaccharides from biofilms produced by A. pleuropneumoniae field isolates IA1 and IA5 (serotypes 1 and 5, respectively), and determined their chemical structures by using NMR spectroscopy. Both strains produced matrix polysaccharides consisting of linear chains of N-acetyl-D-glucosamine (GlcNAc) residues in β(1,6) linkage (poly-β-1,6-GlcNAc or PGA). A small percentage of the GlcNAc residues in each polysaccharide were N-deacetylated. These structures were nearly identical to those of biofilm matrix polysaccharides produced by Escherichia coli, Staphylococcus aureus and S. epidermidis. PCR analyses indicated that a gene encoding the PGA-specific glycoside transferase enzyme PgaC was present on the chromosome of 15 out of 15 A. pleuropneumoniae reference strains (serotypes 1-12) and 76 out of 77 A. pleuropneumoniae field isolates (serotypes 1, 5 and 7). A pgaC mutant of strain IA5 failed to form biofilms in vitro, as did wild-type strains IA1 and IA5 when grown in broth supplemented with the PGA-hydrolyzing enzyme dispersin B. Treatment of IA5 biofilms with dispersin B rendered them more sensitive to killing by ampicillin. Our findings suggest that PGA functions as a major biofilm adhesin in A. pleuropneumoniae. Biofilm formation may have relevance to the colonization and pathogenesis of A. pleuropneumoniae in pigs. PMID:17412552

Combined GPS and seismic monitoring of a 12-story structure in a region of induced seismicity in Oklahoma

NASA Astrophysics Data System (ADS)

Haase, J. S.; Soliman, M.; Kim, H.; Jaiswal, P.; Saunders, J. K.; Vernon, F.; Zhang, W.

2017-12-01

This work focuses on quantifying ground motions and their effects in Oklahoma near the location of the 2016 Mw 5.8 Pawnee earthquake, where seismicity has been increasing due to wastewater injection related to oil and natural gas production. Much of the building inventory in Oklahoma was constructed before the increase in seismicity and before the implementation of earthquake design and detailing provisions for reinforced concrete (RC) structures. We will use combined GPS/seismic monitoring techniques to measure ground motion in the field and the response of structures to this ground motion. Several Oklahoma State University buildings experienced damage due to the Pawnee earthquake. The USGS Shake Map product estimated peak ground acceleration (PGA) ranging from 0.12g to 0.15g at campus locations. We are deploying a high-rate GPS sensor and accelerometer on the roof and another accelerometer at ground level of a 12-story RC structure and at selected field sites in order to collect ambient noise data and nearby seismicity. The longer period recording characteristics of the GPS/seismic system are particularly well adapted to monitoring these large structures in the event of a significant earthquake. Gross characteristics of the structural system are described, which consists of RC columns and RC slabs in all stories. We conducted a preliminary structural analysis including modal analysis and response spectrum analysis based on a finite element (FE) simulation, which indicated that the period associated with the first X-axis bending, first torsional, and first Y-axis bending modes are 2.2 s, 2.1 s, and 1.8 s, respectively. Next, a preliminary analysis was conducted to estimate the range of expected deformation at the roof level for various earthquake excitations. The earthquake analysis shows a maximum roof displacement of 5 and 7 cm in the horizontal directions resulting from earthquake loads with PGA of 0.2g, well above the noise level of the combined GPS/seismic displacements. Another earthquake comparable to the Pawnee earthquake should be well recorded by the system. Recordings of ambient vibration data collected to date describing noise characteristics and measurement error levels will be presented. Any recordings of seismic motions will be discussed, should a significant event occur.

Modeling the Interaction between Fluid Pressure and Faulting in an Earthquake Swarm at Long Valley Caldera

NASA Astrophysics Data System (ADS)

Haase, J. S.; Soliman, M.; Kim, H.; Jaiswal, P.; Saunders, J. K.; Vernon, F.; Zhang, W.

2016-12-01

This work focuses on quantifying ground motions and their effects in Oklahoma near the location of the 2016 Mw 5.8 Pawnee earthquake, where seismicity has been increasing due to wastewater injection related to oil and natural gas production. Much of the building inventory in Oklahoma was constructed before the increase in seismicity and before the implementation of earthquake design and detailing provisions for reinforced concrete (RC) structures. We will use combined GPS/seismic monitoring techniques to measure ground motion in the field and the response of structures to this ground motion. Several Oklahoma State University buildings experienced damage due to the Pawnee earthquake. The USGS Shake Map product estimated peak ground acceleration (PGA) ranging from 0.12g to 0.15g at campus locations. We are deploying a high-rate GPS sensor and accelerometer on the roof and another accelerometer at ground level of a 12-story RC structure and at selected field sites in order to collect ambient noise data and nearby seismicity. The longer period recording characteristics of the GPS/seismic system are particularly well adapted to monitoring these large structures in the event of a significant earthquake. Gross characteristics of the structural system are described, which consists of RC columns and RC slabs in all stories. We conducted a preliminary structural analysis including modal analysis and response spectrum analysis based on a finite element (FE) simulation, which indicated that the period associated with the first X-axis bending, first torsional, and first Y-axis bending modes are 2.2 s, 2.1 s, and 1.8 s, respectively. Next, a preliminary analysis was conducted to estimate the range of expected deformation at the roof level for various earthquake excitations. The earthquake analysis shows a maximum roof displacement of 5 and 7 cm in the horizontal directions resulting from earthquake loads with PGA of 0.2g, well above the noise level of the combined GPS/seismic displacements. Another earthquake comparable to the Pawnee earthquake should be well recorded by the system. Recordings of ambient vibration data collected to date describing noise characteristics and measurement error levels will be presented. Any recordings of seismic motions will be discussed, should a significant event occur.

The 26 January 2001 M 7.6 Bhuj, India, earthquake: Observed and predicted ground motions

USGS Publications Warehouse

Hough, S.E.; Martin, S.; Bilham, R.; Atkinson, G.M.

2002-01-01

Although local and regional instrumental recordings of the devastating 26, January 2001, Bhuj earthquake are sparse, the distribution of macroseismic effects can provide important constraints on the mainshock ground motions. We compiled available news accounts describing damage and other effects and interpreted them to obtain modified Mercalli intensities (MMIs) at >200 locations throughout the Indian subcontinent. These values are then used to map the intensity distribution throughout the subcontinent using a simple mathematical interpolation method. Although preliminary, the maps reveal several interesting features. Within the Kachchh region, the most heavily damaged villages are concentrated toward the western edge of the inferred fault, consistent with western directivity. Significant sediment-induced amplification is also suggested at a number of locations around the Gulf of Kachchh to the south of the epicenter. Away from the Kachchh region, intensities were clearly amplified significantly in areas that are along rivers, within deltas, or on coastal alluvium, such as mudflats and salt pans. In addition, we use fault-rupture parameters inferred from teleseismic data to predict shaking intensity at distances of 0-1000 km. We then convert the predicted hard-rock ground-motion parameters to MMI by using a relationship (derived from Internet-based intensity surveys) that assigns MMI based on the average effects in a region. The predicted MMIs are typically lower by 1-3 units than those estimated from news accounts, although they do predict near-field ground motions of approximately 80%g and potentially damaging ground motions on hard-rock sites to distances of approximately 300 km. For the most part, this discrepancy is consistent with the expected effect of sediment response, but it could also reflect other factors, such as unusually high building vulnerability in the Bhuj region and a tendency for media accounts to focus on the most dramatic damage, rather than the average effects. The discrepancy may also be partly attributable to the inadequacy of the empirical relationship between MMI and peak ground acceleration (PGA), when applied to India. The MMI-PGA relationship was developed using data from California earthquakes, which might have a systematically different stress drop and therefore, a different frequency content than intraplate events. When a relationship between response spectra and MMI is used, we obtain larger predicted MMI values, in better agreement with the observations.

Estimation of slip scenarios of mega-thrust earthquakes and strong motion simulations for Central Andes, Peru

NASA Astrophysics Data System (ADS)

Pulido, N.; Tavera, H.; Aguilar, Z.; Chlieh, M.; Calderon, D.; Sekiguchi, T.; Nakai, S.; Yamazaki, F.

2012-12-01

We have developed a methodology for the estimation of slip scenarios for megathrust earthquakes based on a model of interseismic coupling (ISC) distribution in subduction margins obtained from geodetic data, as well as information of recurrence of historical earthquakes. This geodetic slip model (GSM) delineates the long wavelength asperities within the megathrust. For the simulation of strong ground motion it becomes necessary to introduce short wavelength heterogeneities to the source slip to be able to efficiently simulate high frequency ground motions. To achieve this purpose we elaborate "broadband" source models constructed by combining the GSM with several short wavelength slip distributions obtained from a Von Karman PSD function with random phases. Our application of the method to Central Andes in Peru, show that this region has presently the potential of generating an earthquake with moment magnitude of 8.9, with a peak slip of 17 m and a source area of approximately 500 km along strike and 165 km along dip. For the strong motion simulations we constructed 12 broadband slip models, and consider 9 possible hypocenter locations for each model. We performed strong motion simulations for the whole central Andes region (Peru), spanning an area from the Nazca ridge (16^o S) to the Mendana fracture (9^o S). For this purpose we use the hybrid strong motion simulation method of Pulido et al. (2004), improved to handle a general slip distribution. Our simulated PGA and PGV distributions indicate that a region of at least 500 km along the coast of central Andes is subjected to a MMI intensity of approximately 8, for the slip model that yielded the largest ground motions among the 12 slip models considered, averaged for all assumed hypocenter locations. This result is in agreement with the macroseismic intensity distribution estimated for the great 1746 earthquake (M~9) in central Andes (Dorbath et al. 1990). Our results indicate that the simulated PGA and PGV for all scenario slips for central Andes, and for an average soil condition, exhibit similar amplitudes and attenuation characteristics with distance as the PGA and PGV values observed during the 2010 Maule (Mw 8.8), and 2011 Tohoku-oki (Mw 9.0) earthquakes. Our results clearly indicate that the simulated ground motions for scenarios with deep rupture nucleations (~40 km) are consistently smaller than the ground motions obtained for shallower rupture nucleations. We also performed strong ground motion simulations in metropolitan Lima by using the aforementioned slip scenarios, and incorporating site amplifications obtained from several microtremors array surveys conducted at representative geotechnical zones in this city. Our simulated PGA and PGV in Lima reach values of 1000 cm/s^2 and 80 cm/s. Our results show that the largest values of PGA (at Puente Piedra district, Northern Lima) are related with short period site effects, whereas the largest values of PGV are related with large site amplifications for periods from 1s to 1.5s (at Callao, Villa el Salvador and La Molina districts). Our results also indicate that the simulated PGA and PGV in central Lima (Parque de la Reserva) are in average 2~3 times larger than the values recorded by a strong motion instrument installed at this location, during the 1974 (Mw8.0) and 1966 (Mw8.0) earthquakes off-shore Lima.

Selection of an Effective Indicator for Rapid Detection of Microorganisms Producing γ-Polyglutamic Acid and Its Biosynthesis Under Submerged Fermentation Conditions Using Bacillus methylotrophicus.

PubMed

Chatterjee, Poonam Mishra; Datta, Silpi; Tiwari, Deepika Pandey; Raval, Ritu; Dubey, Ashok Kumar

2018-05-01

γ-Polyglutamic acid (γ-PGA) is a biosynthetic outcome of glutamic acid polymerization by microbes. In the current study, we have isolated Bacillus methylotrophicus on solid differential media containing methylene blue. This is the first report mentioning the use of methylene blue to distinguish the monomeric and polymeric form of glutamic acid in the liquid medium using UV-Vis spectrophotometer. Our method can simplify the analytical process of γ-PGA confirmation using the aforementioned studies. This screening protocol is sensitive to the detection of γ-PGA quantities as low as 3 μg/mL; thus, the potent producers can be effectively screened. Furthermore, we have carried out process optimization of the present strain for γ-PGA production wherein we could obtain 1.4-fold improvement in the yield with respect to utilization of carbon source and 2.6-fold increase with respect to nitrogen source under submerged fermentation at a shake flask level. We have shown an increase in γ-PGA titer from 1.5 to 36 g/L using mannitol, monosodium glutamate, peptone, and tween 20.

Enhancement of efficiency of chitosan-based complexes for gene transfection with poly(γ-glutamic acid) by augmenting their cellular uptake and intracellular unpackage.

PubMed

Liao, Zi-Xian; Peng, Shu-Fen; Chiu, Ya-Ling; Hsiao, Chun-Wen; Liu, Hung-Yi; Lim, Woon-Hui; Lu, Hsiang-Ming; Sung, Hsing-Wen

2014-11-10

As a cationic polysaccharide, chitosan (CS) has been identified for its potential use as a non-viral vector for exogenous gene transfection. However, owing to their electrostatic interactions, CS complexes may cause difficulties in gene release upon their arrival at the site of action, thus limiting their transfection efficiency. In this work, an attempt is made to facilitate the release of a gene by incorporating a negatively-charged poly(γ-glutamic acid) (γPGA) into CS complexes in order to diminish their attractive interactions. The mechanisms of exploiting γPGA to enhance the transfection efficiency of CS complexes are elucidated. The feasibility of using this CS/γPGA-based system for DNA or siRNA transfer is explored as well. Additionally, potential of the CS/γPGA formulation to deliver disulfide bond-conjugated dual PEGylated siRNAs for multiple gene silencing is also examined. Moreover, the genetic use of pKillerRed-mem, delivered using complexes of CS and γPGA, to express a membrane-targeted KillerRed as an intrinsically generated photosensitizer for photodynamic therapy is described. Copyright © 2014 Elsevier B.V. All rights reserved.

A Study of the Oxidation Behaviour of Pile Grade A (PGA) Nuclear Graphite Using Thermogravimetric Analysis (TGA), Scanning Electron Microscopy (SEM) and X-Ray Tomography (XRT).

PubMed

Payne, Liam; Heard, Peter J; Scott, Thomas B

2015-01-01

Pile grade A (PGA) graphite was used as a material for moderating and reflecting neutrons in the UK's first generation Magnox nuclear power reactors. As all but one of these reactors are now shut down there is a need to understand the residual state of the material prior to decommissioning of the cores, in particular the location and concentration of key radio-contaminants such as 14C. The oxidation behaviour of unirradiated PGA graphite was studied, in the temperature range 600-1050°C, in air and nitrogen using thermogravimetric analysis, scanning electron microscopy and X-ray tomography to investigate the possibility of using thermal degradation techniques to examine 14C distribution within irradiated material. The thermal decomposition of PGA graphite was observed to follow the three oxidation regimes historically identified by previous workers with limited, uniform oxidation at temperatures below 600°C and substantial, external oxidation at higher temperatures. This work demonstrates that the different oxidation regimes of PGA graphite could be developed into a methodology to characterise the distribution and concentration of 14C in irradiated graphite by thermal treatment.

A Study of the Oxidation Behaviour of Pile Grade A (PGA) Nuclear Graphite Using Thermogravimetric Analysis (TGA), Scanning Electron Microscopy (SEM) and X-Ray Tomography (XRT)

PubMed Central

Payne, Liam; Heard, Peter J.; Scott, Thomas B.

2015-01-01

Pile grade A (PGA) graphite was used as a material for moderating and reflecting neutrons in the UK’s first generation Magnox nuclear power reactors. As all but one of these reactors are now shut down there is a need to understand the residual state of the material prior to decommissioning of the cores, in particular the location and concentration of key radio-contaminants such as 14C. The oxidation behaviour of unirradiated PGA graphite was studied, in the temperature range 600–1050°C, in air and nitrogen using thermogravimetric analysis, scanning electron microscopy and X-ray tomography to investigate the possibility of using thermal degradation techniques to examine 14C distribution within irradiated material. The thermal decomposition of PGA graphite was observed to follow the three oxidation regimes historically identified by previous workers with limited, uniform oxidation at temperatures below 600°C and substantial, external oxidation at higher temperatures. This work demonstrates that the different oxidation regimes of PGA graphite could be developed into a methodology to characterise the distribution and concentration of 14C in irradiated graphite by thermal treatment. PMID:26575374

Colonic delivery of indometacin loaded PGA-co-PDL microparticles coated with Eudragit L100-55 from fast disintegrating tablets.

PubMed

Tawfeek, Hesham M; Abdellatif, Ahmed A H; Dennison, Thomas J; Mohammed, Afzal R; Sadiq, Younis; Saleem, Imran Y

2017-10-05

The aim of this work was to investigate the efficient targeting and delivery of indometacin (IND), as a model anti-inflammatory drug to the colon for treatment of inflammatory bowel disease. We prepared fast disintegrating tablets (FDT) containing IND encapsulated within poly(glycerol-adipate-co-ɷ-pentadecalactone), PGA-co-PDL, microparticles and coated with Eudragit L100-55 at different ratios (1:1.5, 1:1, 1:0.5). Microparticles encapsulated with IND were prepared using an o/w single emulsion solvent evaporation technique and coated with Eudragit L-100-55 via spray drying. The produced coated microparticles (PGA-co-PDL-IND/Eudragit) were formulated into optimised FTD using a single station press. The loading, in vitro release, permeability and transport of IND from PGA-co-PDL-IND/Eudragit microparticles was studied in Caco-2 cell lines. IND was efficiently encapsulated (570.15±4.2μg/mg) within the PGA-co-PDL microparticles. In vitro release of PGA-co-PDL-IND/Eudragit microparticles (1:1.5) showed significantly (p<0.05, ANOVA/Tukey) lower release of IND 13.70±1.6 and 56.46±3.8% compared with 1:1 (89.61±2.5, 80.13±2.6%) and 1:0.5 (39.46±0.9 & 43.38±3.12) after 3 and 43h at pH 5.5 and 6.8, respectively. The permeability and transport studies indicated IND released from PGA-co-PDL-IND/Eudragit microparticles had a lower permeability coefficient of 13.95±0.68×10 -6 cm/s compared to free IND 23.06±3.56×10 -6 cm/s. These results indicate the possibility of targeting anti-inflammatory drugs to the colon using FDTs containing microparticles coated with Eudragit. Copyright © 2017 Elsevier B.V. All rights reserved.

Covalent immobilization of penicillin G acylase on aminopropyl-functionalized mesostructured cellular foams.

PubMed

Zhao, Junqi; Wang, Yujun; Luo, Guangsheng; Zhu, Shenlin

2010-10-01

Mesostructured cellular foams (MCFs) are suitable for biomolecular immobilization because of their relatively large-pore diameter and pore volume. Penicillin G acylase (PGA) was immobilized on aminopropyl-functionalized MCFs through Schiff base reaction. It is shown that PGA could be fixed more firmly through the covalent immobilization on aminopropyl-functionalized MCFs support than through the adsorption immobilization on blank MCFs. The PGA loading amount on the aminopropyl-functionalized MCFs could reach 443 mg/g (dry support), and the apparent activity could achieve up to 4138 U/g (dry support). The influence of the amount of grafted aminopropyl group was studied, and it is found that the optimal molar ratio of MCFs to APTS was 15/1; in addition, the suitable enzyme distribution density for the specific activity of the immobilized PGA was 0.7 mg enzyme per m(2) of specific area of MCFs. Copyright 2010 Elsevier Ltd. All rights reserved.

Poly(dl)lactic acid/polyglycolic acid/iron and poly(dl)lactic acid/polyglycolic acid/samarium cobalt composites for use as a delivery mechanism for magnetically directed chondrogenesis

NASA Astrophysics Data System (ADS)

Oppermann, Dean Alan

Magnetically directed chondrogenesis (MDC) is a fundamental approach to articular cartilage repair. In MDC a magnet is implanted into the subchondral trabecular bone underlying a cartilage defect and used to attract chondrocytes, magnetically tagged with Fe nanoparticles, to the defect site. Pilot studies by Halpern, Crimp and Grande, using solid neodymium (Nd) magnets, indicated optimistic results by producing a hyaline-like articular cartilage after 8 weeks implantation. Since solid Nd magnets introduce long-term biocompatibility issues, the focus of this dissertation was to develop P(dl)A/PGA/Fe and P(dl)A/PGA/SmCo 5 implants for use in MDC. The effect of implant porosity, implant composition and magnetic material (Fe or SmCo5) on the initial and degraded magnetic properties were evaluated. The biocompatibility of P(dl)A/PGA/Fe implants were investigated by implantation into New Zealand white rabbits for 8 weeks. The effect of hydrogen peroxide (H2O2) and ethylene oxide (EO) sterilization techniques on the molecular weight and chemical structure of P(dl)A/PGA polymers were evaluated using gel permeation chromatography and Fourier transform infrared spectroscopy. The effect of implant morphology, size and number on the von Mises stress in the trabecular bone surrounding the implant was evaluated using a finite element model. In general, SmCo5 implants resulted in higher magnetic fields initially and after 8 weeks of degradation than comparable Fe implants. Increases in magnetic field strength were achieved by increasing the volume fraction of magnetic material and by increasing the PGA concentration. The magnetic field strength degradation rate decreased with increases in volume fraction of magnetic material and increases in PLA concentration. Implantation studies indicated that 50/50 P(dl)A/PGA were more bioactive than 75/25 P(dl)A/PGA with an increased cellular response that is specific to bone growth. The compressive strength and elastic modulus of porous implants were comparable to trabecular bone, and the compressive strength and elastic modulus of solid implants was higher than trabecular bone but less than cortical bone. Finite element modeling showed that the implantation of solid and porous P(dl)A/PGA/Fe implants did not significantly increase the von Mises stress concentration adjacent to the implant. The von Mises stress surrounding porous implants was higher than the solid implants which predicts faster bone remodeling. Comparing single implants to multiple implants indicated a significant decrease in von Mises stress between the implants. This would predict bone resorption in that area. H2O2 sterilization resulted in a gradual decrease in the molecular weight of P(dl)A/PGA polymers that was a result of hydrolytic scission of the ester bonds present between the individual monomers. The polymers were less affected by EO sterilization with only the 75/25 P(dl)A/PGA, indicating a decrease in molecular weight. From these results, it was concluded that solid 50/50 P(dl)A/PGA/SmCo 5 implants that span the entire width of the cartilage defect should be used to optimize the attraction potential and bioactivity of the implant. Also ethylene oxide, which caused less premature implant degradation, should be used for sterilization.

Peak impact accelerations during track and treadmill running.

PubMed

Bigelow, Erin M R; Elvin, Niell G; Elvin, Alex A; Arnoczky, Steven P

2013-10-01

To determine whether peak vertical and horizontal impact accelerations were different while running on a track or on a treadmill, 12 healthy subjects (average age 32.8 ± 9.8 y), were fitted with a novel, wireless accelerometer capable of recording triaxial acceleration over time. The accelerometer was attached to a custom-made acrylic plate and secured at the level of the L5 vertebra via a tight fitting triathlon belt. Each subject ran 4 miles on a synthetic, indoor track at a self-selected pace and accelerations were recorded on three perpendicular axes. Seven days later, the subjects ran 4 miles on a treadmill set at the individual runner's average pace on the track and the peak vertical and horizontal impact magnitudes between the track and treadmill were compared. There was no difference (P = .52) in the average peak vertical impact accelerations between the track and treadmill over the 4 mile run. However, peak horizontal impact accelerations were greater (P = .0012) on the track when compared with the treadmill. This study demonstrated the feasibility for long-term impact accelerations monitoring using a novel wireless accelerometer.

Surface Polysaccharide Mutants Reveal that Absence of O Antigen Reduces Biofilm Formation of Actinobacillus pleuropneumoniae

PubMed Central

Hathroubi, S.; Hancock, M. A.; Langford, P. R.; Tremblay, Y. D. N.; Labrie, J.

2015-01-01

Actinobacillus pleuropneumoniae is a Gram-negative bacterium belonging to the Pasteurellaceae family and the causative agent of porcine pleuropneumonia, a highly contagious lung disease causing important economic losses. Surface polysaccharides, including lipopolysaccharides (LPS) and capsular polysaccharides (CPS), are implicated in the adhesion and virulence of A. pleuropneumoniae, but their role in biofilm formation is still unclear. In this study, we investigated the requirement for these surface polysaccharides in biofilm formation by A. pleuropneumoniae serotype 1. Well-characterized mutants were used: an O-antigen LPS mutant, a truncated core LPS mutant with an intact O antigen, a capsule mutant, and a poly-N-acetylglucosamine (PGA) mutant. We compared the amount of biofilm produced by the parental strain and the isogenic mutants using static and dynamic systems. Compared to the findings for the biofilm of the parental or other strains, the biofilm of the O antigen and the PGA mutants was dramatically reduced, and it had less cell-associated PGA. Real-time PCR analyses revealed a significant reduction in the level of pgaA, cpxR, and cpxA mRNA in the biofilm cells of the O-antigen mutant compared to that in the biofilm cells of the parental strain. Specific binding between PGA and LPS was consistently detected by surface plasmon resonance, but the lack of O antigen did not abolish these interactions. In conclusion, the absence of the O antigen reduces the ability of A. pleuropneumoniae to form a biofilm, and this is associated with the reduced expression and production of PGA. PMID:26483403

Synthesis and properties of a biodegradable polymer-drug conjugate: Methotrexate-poly(glycerol adipate).

PubMed

Suksiriworapong, Jiraphong; Taresco, Vincenzo; Ivanov, Delyan P; Styliari, Ioanna D; Sakchaisri, Krisada; Junyaprasert, Varaporn Buraphacheep; Garnett, Martin C

2018-07-01

Polymer-drug conjugates have been actively developed as potential anticancer drug delivery systems. In this study, we report the first polymer-anticancer drug conjugate with poly(glycerol adipate) (PGA) through the successful conjugation of methotrexate (MTX). MTX-PGA conjugates were controllably and simply fabricated by carbodiimide-mediated coupling reaction with various high molar ratios of MTX. The MTX-PGA conjugate self-assembled into nanoparticles with size dependent on the amount of conjugated MTX and the pH of medium. Change in particle size was attributed to steric hindrance and bulkiness inside the nanoparticle core and dissociation of free functional groups of the drug. The MTX-PGA nanoparticles were physically stable in media with pH range of 5-9 and ionic strength of up to 0.15 M NaCl and further chemically stable against hydrolysis in pH 7.4 medium over 30 days but enzymatically degradable to release unchanged free drug. Although 30%MTX-PGA nanoparticles exhibited only slightly less potency than free MTX in 791T cells in contrast to previously reported human serum albumin-MTX conjugates which had >300 times lower potency than free MTX. However, the MTX nanoparticles showed 7 times higher toxicity to Saos-2 cells than MTX. Together with the enzymic degradation experiments, these results suggest that with a suitable biodegradable polymer a linker moiety is not a necessary component. These easily synthesised PGA drug conjugates lacking a linker moiety could therefore be an effective new pathway for development of polymer drug conjugates. Copyright © 2018 Elsevier B.V. All rights reserved.

Hydrophilic porous magnetic poly(GMA-MBAA-NVP) composite microspheres containing oxirane groups: An efficient carrier for immobilizing penicillin G acylase

NASA Astrophysics Data System (ADS)

Xue, Ping; Su, Weiguang; Gu, Yaohua; Liu, Haifeng; Wang, Julan

2015-03-01

Magnetic hydrophilic polymeric microspheres containing oxirane groups were prepared by inverse suspension polymerization of glycidyl methacrylate (GMA), N, N‧-methylene bisacrylamide (MBAA) and N-vinyl pyrrolidone (NVP) in the existence of formamide, which were denoted as magnetic poly(GMA-MBAA-NVP) microspheres. The magnetic poly(GMA-MBAA-NVP) microspheres were characterized by scanning electron microscopy (SEM), FT-IR spectroscopy, X-ray diffraction (XRD), vibrating sample magnetometer (VSM) and so on. The results showed that poly(GMA-MBAA-NVP) microspheres possessed well spherical shape, narrow size distribution, abundant porous structure, reactive oxirane groups and superparamagnetic properties. Formamide used in the present work served as a modifier, a dispersant and a porogen to form final porous polymer microspheres. The penicillin G acylase (PGA) was covalently immobilized onto the magnetic microspheres through the reaction between the amino groups of enzyme and the oxirane groups on the microspheres for producing 6-aminopenicillanic acid (6-APA). The effects of GMA/NVP ratio and crosslink density on the activity of immobilized PGA were investigated. The highest apparent activity, enzyme loading and coupling yield of immobilized PGA were 821 IU/g, 65.3 mg/g and 42.3% respectively when the mass ratio of GMA/NVP was 1:1 and crosslink density was 60%. Compared with the free PGA, immobilized PGA showed a wider range of pH value and reaction temperature. The relative activity and reaction rate of immobilized PGA remained almost constant after 20 recycles. The magnetic poly(GMA-MBAA-NVP) microspheres would be very promising carriers for immobilizing enzymes in industrial application.

Proton magnetic resonance spectroscopy (MRS) in on-line game addiction.

PubMed

Han, Doug Hyun; Lee, Young Sik; Shi, Xianfeng; Renshaw, Perry F

2014-11-01

Recent brain imaging studies suggested that both the frontal and temporal cortices are important candidate areas for mediating the symptoms of internet addiction. We hypothesized that deficits of prefrontal and temporal cortical function in patients with on-line game addiction (PGA) would be reflected in decreased levels of N-acetyl aspartate (NAA) and cytosolic, choline containing compound (Cho). Seventy three young PGA and 38 age and sex matched healthy control subjects were recruited in the study. Structural MR and (1)H MRS data were acquired using a 3.0 T MRI scanner. Voxels were sequentially placed in right frontal cortex and right medial temporal cortices. In the right frontal cortex, the levels of NAA in PGA were lower than those in healthy controls. In the medial temporal cortex, the levels of Cho in PGA participants were lower than those observed in healthy controls. The Young Internet Addiction Scale (YIAS) scores and perseverative responses in PGA were negatively correlated with the level of NAA in right frontal cortex. The Beck Depressive Inventory (BDI) scores in the PGA cohort were negatively correlated with Cho levels in the right temporal lobe. To the best of our knowledge, this is the first MRS study of individuals with on-line game addiction. Although, the subjects with on-line game addiction in the current study were free from psychiatric co-morbidity, patients with on-line game addiction appear to share characteristics with ADHD and MDD in terms of neurochemical changes in frontal and temporal cortices. Copyright © 2014 Elsevier Ltd. All rights reserved.

Increasing the bioflocculant production and identifying the effect of overexpressing epsB on the synthesis of polysaccharide and γ-PGA in Bacillus licheniformis.

PubMed

Liu, Peize; Chen, Zhen; Yang, Lijie; Li, Qingbiao; He, Ning

2017-09-26

Polysaccharides and poly-γ-glutamic acid (γ-PGA) are biomacromolecules that have been reported as bioflocculants, and they exhibit high flocculating activity in many industrial applications. Bacillus licheniformis CGMCC 2876 can produce polysaccharide and γ-PGA bioflocculants under different culture conditions. Several key genes are involved in the metabolic pathway of polysaccharides in B. licheniformis, but the impacts of the regulation of these genes on the production of polysaccharide bioflocculants have not been illustrated completely. To increase the bioflocculant production and identify the correlation between the synthesis of polysaccharides and γ-PGA in B. licheniformis, a few key genes were investigated to explore their influence on the synthesis of the bioflocculants. Overexpressing epsB from the eps gene cluster not only improved the bioflocculant crude yield by 13.98% but also enhanced the flocculating activity by 117.92%. The composition of the bioflocculant from the epsB recombinant strain was 28.95% total sugar, 3.464% protein and 44.03% γ-PGA, while in the original strain, these components represented 53.67%, 3.246% and 34.13%, respectively. In combination with an analysis of the transcriptional levels of several key genes involved in γ-PGA synthesis in B. licheniformis, we inferred that epsB played a key role in the synthesis of both polysaccharide and γ-PGA. The bioflocculant production of the epsB recombinant strain was further evaluated during batch fermentation in a 2 L fermenter; the flocculating activity reached 9612.75 U/mL, and the bioflocculant yield reached 10.26 g/L after 72 h, representing increases of 224% and 36.62%, respectively, compared with the original strain. Moreover, we found that the tandem expression of phosphoglucomutase (pgcA) and UTP-glucose-1-phosphate uridylyltransferase (gtaB1) could enhance the crude yield of the bioflocculant by 20.77% and that the overexpression of epsA could enhance the bioflocculant yield by 23.70% compared with the original strain. This study provides a new method to greatly increase the bioflocculant production in B. licheniformis, and it demonstrates the correlation between the biosynthesis of polysaccharide and γ-PGA during EPS fermentation by regulating the expression of EpsB.

Analysis of Published Criteria for Clinically Inactive Disease in a Large Juvenile Dermatomyositis Cohort Shows That Skin Disease Is Underestimated.

PubMed

Almeida, Beverley; Campanilho-Marques, Raquel; Arnold, Katie; Pilkington, Clarissa A; Wedderburn, Lucy R; Nistala, Kiran

2015-09-01

The Pediatric Rheumatology International Trials Organisation (PRINTO) recently published criteria for classification of patients with juvenile dermatomyositis (DM) as having clinically inactive disease. The criteria require that at least 3 of 4 conditions be met, i.e., creatine kinase level ≤150 units/liter, Childhood Myositis Assessment Scale score ≥48, Manual Muscle Testing in 8 muscles score ≥78, and physician's global assessment of overall disease activity (PGA) ≤0.2. The present study was undertaken to test these criteria in a UK cohort of patients with juvenile DM. We assessed 1,114 patient visits for the 4 items in the PRINTO criteria for clinically inactive disease. Each visit was analyzed to determine whether skin disease was present. The Disease Activity Score (DAS) for juvenile DM was determined in 59 patients. At 307 of the 1,114 visits, clinically inactive disease was achieved based on the 3 muscle criteria (but with a PGA of >0.2); rash was present at 65.8% of these visits and nailfold capillary abnormalities at 35.2%. When PGA ≤0.2 was one of the 3 criteria that were met, the frequency of skin signs was significantly lower (rash in 23.1% and nailfold capillary abnormalities in 8.7%). If PGA was considered an essential criterion for clinically inactive disease (P-CID), patients with active skin disease were less likely to be categorized as having clinically inactive disease (a median DAS skin score of 0 [of a possible maximum of 9] in visits where the PGA was ≤0.2, versus a median DAS skin score of 4 in patients meeting the 3 muscle criteria [with a PGA of >0.2]; P < 0.001). Use of the P-CID led to improvements in the positive predictive value and the positive likelihood ratio (85.4% and 11.0, respectively, compared to 72.9% and 5.1 with the current criteria). There was a high frequency of skin disease among patients with juvenile DM who did not meet the PGA criterion for inactive disease but met the other 3 criteria. Incorporating PGA as an essential criterion for clinically inactive disease helps prevent the misclassification of patients with active skin disease. © 2015 The Authors. Arthritis & Rheumatology is published by Wiley Periodicals, Inc. on behalf of the American College of Rheumatology.

Unique Variant of NOD2 Pediatric Granulomatous Arthritis With Severe 1,25-Dihydroxyvitamin D-Mediated Hypercalcemia and Generalized Osteosclerosis.

PubMed

Whyte, Michael P; Lim, Emilina; McAlister, William H; Gottesman, Gary S; Trinh, Lien; Veis, Deborah J; Bijanki, Vinieth N; Boden, Matthew G; Nenninger, Angela; Mumm, Steven; Buchbinder, David

2018-06-22

Pediatric granulomatous arthritis (PGA) refers to two formerly separate entities; autosomal dominant Blau syndrome (BS) and its sporadic phenocopy early-onset sarcoidosis (EOS). In 2001 BS and in 2005 EOS became explained by heterozygous mutations within the gene that encodes nucleotide-binding oligomerization domain-containing protein 2 (NOD2), also called caspase recruitment domain-containing protein 15 (CARD15). NOD2 is a microbe sensor in leukocyte cytosol that activates and regulates inflammation. PGA is characterized by a triad of auto-inflammatory problems (dermatitis, uveitis, and arthritis) in early childhood, which suggests the causal NOD2/CARD15 mutations are activating defects. Additional complications of PGA were recognized especially when NOD2 mutation analysis became generally available. However, in PGA hypercalcemia is only briefly mentioned, and generalized osteosclerosis is not reported although NOD2 regulates NF-κB signaling essential for osteoclastogenesis and osteoclast function. Herein, we report a 4-year-old girl with PGA uniquely complicated by severe 1,25(OH) 2 D-mediated hypercalcemia, nephrocalcinosis, and compromised renal function together with radiological and histopathological features of osteopetrosis (OPT). The classic triad of PGA complications was absent although joint pain and an antalgic gait accompanied wrist, knee, and ankle swelling and soft non-tender masses over her hands, knees, and feet. MRI revealed tenosynovitis in her hands and suprapatellar effusions. Synovial biopsy demonstrated reactive synovitis without granulomas. Spontaneous resolution of metaphyseal osteosclerosis occurred while biochemical markers indicated active bone turnover. Anti-inflammatory medications suppressed circulating 1,25(OH) 2 D, corrected the hypercalcemia, and improved her renal function, joint pain and swelling, and gait. Mutation analysis excluded idiopathic infantile hypercalcemia, type 1, and known forms of OPT, and identified a heterozygous germline missense mutation in NOD2 common in PGA (c.1001G > A, p.Arg334Gln). Thus, radiological and histological findings of OPT and severe hypercalcemia from apparent extrarenal production of 1,25(OH) 2 D can complicate NOD2-associated PGA. Although the skeletal findings seem inconsequential, treatment of the hypercalcemia is crucial to protect the kidneys. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Analysis of Published Criteria for Clinically Inactive Disease in a Large Juvenile Dermatomyositis Cohort Shows That Skin Disease Is Underestimated

PubMed Central

Almeida, Beverley; Campanilho‐Marques, Raquel; Arnold, Katie; Pilkington, Clarissa A.; Wedderburn, Lucy R.; Armon, Kate; Briggs, Vanja; Ellis‐Gage, Joe; Roper, Holly; Watts, Joanna; Baildam, Eileen; Hanna, Louise; Lloyd, Olivia; McCann, Liza; Roberts, Ian; McGovern, Ann; Riley, Phil; Al‐Abadi, Eslam; Ryder, Clive; Scott, Janis; Southwood, Taunton; Thomas, Beverley; Amin, Tania; Burton, Deborah; Jackson, Gillian; Van Rooyen, Vanessa; Wood, Mark; Wyatt, Sue; Browne, Michael; Davidson, Joyce; Ferguson, Sue; Gardner‐Medwin, Janet; Martin, Neil; Waxman, Liz; Foster, Helen; Friswell, Mark; Jandial, Sharmila; Qiao, Lisa; Sen, Ethan; Smith, Eve; Stevenson, Vicky; Swift, Alison; Wade, Debbie; Watson, Stuart; Crate, Lindsay; Frost, Anna; Jordan, Mary; Mosley, Ellen; Satyapal, Rangaraj; Stretton, Elizabeth; Venning, Helen; Warrier, Kishore; Almeida, Beverley; Arnold, Katie; Beard, Laura; Brown, Virginia; Campanilho‐Marques, Raquel; Enayat, Elli; Glackin, Yvonne; Halkon, Elizabeth; Hasson, Nathan; Juggins, Audrey; Kassoumeri, Laura; Lunt, Sian; Maillard, Sue; Nistala, Kiran; Pilkington, Clarissa; Simou, Stephanie; Smith, Sally; Varsani, Hemlata; Wedderburn, Lucy; Murray, Kevin; Ioannou, John; Suffield, Linda; Al‐Obaidi, Muthana; Leach, Sam; Lee, Helen; Smith, Helen; Inness, Emma; Kendall, Eunice; Mayers, David; Wilkinson, Nick; Clinch, Jacqui; Pluess‐Hall, Helen

2015-01-01

Objective The Pediatric Rheumatology International Trials Organisation (PRINTO) recently published criteria for classification of patients with juvenile dermatomyositis (DM) as having clinically inactive disease. The criteria require that at least 3 of 4 conditions be met, i.e., creatine kinase level ≤150 units/liter, Childhood Myositis Assessment Scale score ≥48, Manual Muscle Testing in 8 muscles score ≥78, and physician's global assessment of overall disease activity (PGA) ≤0.2. The present study was undertaken to test these criteria in a UK cohort of patients with juvenile DM. Methods We assessed 1,114 patient visits for the 4 items in the PRINTO criteria for clinically inactive disease. Each visit was analyzed to determine whether skin disease was present. The Disease Activity Score (DAS) for juvenile DM was determined in 59 patients. Results At 307 of the 1,114 visits, clinically inactive disease was achieved based on the 3 muscle criteria (but with a PGA of >0.2); rash was present at 65.8% of these visits and nailfold capillary abnormalities at 35.2%. When PGA ≤0.2 was one of the 3 criteria that were met, the frequency of skin signs was significantly lower (rash in 23.1% and nailfold capillary abnormalities in 8.7%). If PGA was considered an essential criterion for clinically inactive disease (P‐CID), patients with active skin disease were less likely to be categorized as having clinically inactive disease (a median DAS skin score of 0 [of a possible maximum of 9] in visits where the PGA was ≤0.2, versus a median DAS skin score of 4 in patients meeting the 3 muscle criteria [with a PGA of >0.2]; P < 0.001). Use of the P‐CID led to improvements in the positive predictive value and the positive likelihood ratio (85.4% and 11.0, respectively, compared to 72.9% and 5.1 with the current criteria). Conclusion There was a high frequency of skin disease among patients with juvenile DM who did not meet the PGA criterion for inactive disease but met the other 3 criteria. Incorporating PGA as an essential criterion for clinically inactive disease helps prevent the misclassification of patients with active skin disease. PMID:25988361

Earthquake Early Warning: New Strategies for Seismic Hardware

NASA Astrophysics Data System (ADS)

Allardice, S.; Hill, P.

2017-12-01

Implementing Earthquake Early Warning System (EEWS) triggering algorithms into seismic networks has been a hot topic of discussion for some years now. With digitizer technology now available, such as the Güralp Minimus, with on average 40-60ms delay time (latency) from earthquake origin to issuing an alert the next step is to provide network operators with a simple interface for on board parameter calculations from a seismic station. A voting mechanism is implemented on board which mitigates the risk of false positives being communicated. Each Minimus can be configured to with a `score' from various sources i.e. Z channel on seismometer, N/S E/W channels on accelerometer and MEMS inside Minimus. If the score exceeds the set threshold then an alert is sent to the `Master Minimus'. The Master Minimus within the network will also be configured as to when the alert should be issued i.e. at least 3 stations must have triggered. Industry standard algorithms focus around the calculation of Peak Ground Acceleration (PGA), Peak Ground Velocity (PGV), Peak Ground Displacement (PGD) and C. Calculating these single station parameters on-board in order to stream only the results could help network operators with possible issues, such as restricted bandwidth. Developments on the Minimus allow these parameters to be calculated and distributed through Common Alert Protocol (CAP). CAP is the XML based data format used for exchanging and describing public warnings and emergencies. Whenever the trigger conditions are met the Minimus can send a signed UDP packet to the configured CAP receiver which can then send the alert via SMS, e-mail or CAP forwarding. Increasing network redundancy is also a consideration when developing these features, therefore the forwarding CAP message can be sent to multiple destinations. This allows for a hierarchical approach by which the single station (or network) parameters can be streamed to another Minimus, or data centre, or both, so that there is no one single point of failure. Developments on the Guralp Minimus to calculate these on board parameters which are capable of streaming single station parameters, accompanied with the ultra-low latency is the next generation of EEWS and Güralps contribution to the community.

Probabilistic Seismic Hazard Assessment for Iraq

DOE Office of Scientific and Technical Information (OSTI.GOV)

Onur, Tuna; Gok, Rengin; Abdulnaby, Wathiq

Probabilistic Seismic Hazard Assessments (PSHA) form the basis for most contemporary seismic provisions in building codes around the world. The current building code of Iraq was published in 1997. An update to this edition is in the process of being released. However, there are no national PSHA studies in Iraq for the new building code to refer to for seismic loading in terms of spectral accelerations. As an interim solution, the new draft building code was considering to refer to PSHA results produced in the late 1990s as part of the Global Seismic Hazard Assessment Program (GSHAP; Giardini et al.,more » 1999). However these results are: a) more than 15 years outdated, b) PGA-based only, necessitating rough conversion factors to calculate spectral accelerations at 0.3s and 1.0s for seismic design, and c) at a probability level of 10% chance of exceedance in 50 years, not the 2% that the building code requires. Hence there is a pressing need for a new, updated PSHA for Iraq.« less

Cardiopulmonary Responses to Supine Cycling during Short-Arm Centrifugation

NASA Technical Reports Server (NTRS)

Vener, J. M.; Simonson, S. R.; Stocks, J.; Evettes, S.; Bailey, K.; Biagini, H.; Jackson, C. G. R.; Greenleaf, J. E.; Dalton, Bonnie P. (Technical Monitor)

2001-01-01

The purpose of this study was to investigate cardiopulmonary responses to supine cycling with concomitant +G(sub z) acceleration using the NASA/Ames Human Powered Short-Arm Centrifuge (HPC). Subjects were eight consenting males (32+/-5 yrs, 178+/-5 cm, 86.1+/- 6.2 kg). All subjects completed two maximal exercise tests on the HPC (with and without acceleration) within a three-day period. A two tailed t-test with statistical significance set at p less than or equal to 0.05 was used to compare treatments. Peak acceleration was 3.4+/-0.1 G(sub z), (head to foot acceleration). Peak oxygen uptake (VO2(sub peak) was not different between treatment groups (3.1+/-0.1 Lmin(exp -1) vs. 3.2+/-0.1 Lmin(exp -1) for stationary and acceleration trials, respectively). Peak HR and pulmonary minute ventilation (V(sub E(sub BTPS))) were significantly elevated (p less than or equal to 0.05) for the acceleration trial (182+/-3 BPM (Beats per Minute); 132.0+/-9.0 Lmin(exp -1)) when compared to the stationary trial (175+/-3 BPM; 115.5+/-8.5 Lmin(exp -1)). Ventilatory threshold expressed as a percent of VO2(sub peak) was not different for acceleration and stationary trials (72+/-2% vs. 68+/-2% respectively). Results suggest that 3.4 G(sub z) acceleration does not alter VO2(sub peak) response to supine cycling. However, peak HR and V(sub E(sub BTPS)) response may be increased while ventilatory threshold response expressed as a function of percent VO2(sub peak) is relatively unaffected. Thus, traditional exercise prescription based on VO2 response would be appropriate for this mode of exercise. Prescriptions based on HR response may require modification.

GIS modelling of seismic vulnerability of residential fabrics considering geotechnical, structural, social and physical distance indicators in Tehran city using multi-criteria decision-making (MCDM) techniques

NASA Astrophysics Data System (ADS)

Rezaie, F.; Panahi, M.

2014-09-01

The main issue in determining the seismic vulnerability is having a comprehensive view to all probable damages related to earthquake occurrence. Therefore, taking factors such as peak ground acceleration (PGA) in the time of earthquake occurrence, the type of structures, population distribution among different age groups, level of education, the physical distance to a hospitals (or medical care centers), etc. into account and categorized under four indicators of geotechnical, structural, social and physical distance to needed facilities and distance from dangerous ones will provide us with a better and more exact outcome. To this end in this paper using analytic hierarchy process (AHP), the amount of importance of criteria or alternatives are determined and using geographical information system (GIS), the vulnerability of Tehran metropolitan as a result of an earthquake, is studied. This study focuses on the fact that Tehran is surrounded by three active and major faults of the Mosha, North Tehran and Rey. In order to comprehensively determine the vulnerability, three scenarios are developed. In each scenario, seismic vulnerability of different areas in Tehran city is analysed and classified into four levels including high, medium, low and safe. The results show that regarding seismic vulnerability, the faults of Mosha, North Tehran and Rey respectively make 6, 16 and 10% of Tehran area highly vulnerable and also 34, 14 and 27% are safe.

Hazard-to-Risk: High-Performance Computing Simulations of Large Earthquake Ground Motions and Building Damage in the Near-Fault Region

NASA Astrophysics Data System (ADS)

Miah, M.; Rodgers, A. J.; McCallen, D.; Petersson, N. A.; Pitarka, A.

2017-12-01

We are running high-performance computing (HPC) simulations of ground motions for large (magnitude, M=6.5-7.0) earthquakes in the near-fault region (< 50 km) to 5 Hz and higher. Ground motions are then used as forcing functions for canonical steel moment frame buildings throughout the near-fault domain. For ground motions, we are using SW4, a fourth order summation-by-parts finite difference time-domain code running on 10,000-100,000's of cores. Earthquake ruptures are generated using the Graves and Pitarka (2017) method. We validated ground motion intensity measurements against Ground Motion Prediction Equations. We considered two events (M=6.5 and 7.0) for vertical strike-slip ruptures with three-dimensional (3D) basin structures, including stochastic heterogeneity. We have also considered M7.0 scenarios for a Hayward Fault rupture scenario which effects the San Francisco Bay Area and northern California using both 1D and 3D earth structure. Dynamic, inelastic response of canonical buildings is computed with the NEVADA, a nonlinear, finite-deformation finite element code. Canonical buildings include 3-, 9-, 20- and 40-story steel moment frame buildings. Damage potential is tracked by the peak inter-story drift (PID) ratio, which measures the maximum displacement between adjacent floors of the building and is strongly correlated with damage. PID ratios greater 1.0 generally indicate non-linear response and permanent deformation of the structure. We also track roof displacement to identify permanent deformation. PID (damage) for a given earthquake scenario (M, slip distribution, hypocenter) is spatially mapped throughout the SW4 domain with 1-2 km resolution. Results show that in the near fault region building damage is correlated with peak ground velocity (PGV), while farther away (> 20 km) it is better correlated with peak ground acceleration (PGA). We also show how simulated ground motions have peaks in the response spectra that shift to longer periods for larger magnitude events and for locations of forward directivity, as has been reported by Sommerville (2003). These advanced numerical simulation capabilities provide a detailed look at the regional distribution of ground motions and allow us to quantify how ground motion hazard translate to risk for specific structures on a regional scale.

Poly(amidoamine) dendrimer-enabled simultaneous stabilization and functionalization of electrospun poly(γ-glutamic acid) nanofibers.

PubMed

Wang, Shige; Zhu, Jingyi; Shen, Mingwu; Zhu, Meifang; Shi, Xiangyang

2014-02-12

We report a facile and general approach to using generation 2 (G2) poly(amidoamine) (PAMAM) dendrimers for simultaneous stabilization and functionalization of electrospun poly(γ-glutamic acid) nanofibers (γ-PGA NFs). In this study, uniform γ-PGA NFs with a smooth morphology were generated using electrospinning technology. In order to endow the NFs with good water stability, amine-terminated G2.NH2 PAMAM dendrimers were utilized to crosslink the γ-PGA NFs via 1-ethyl-3-(3-dimethylami-nopropyl) carbodiimide coupling chemistry. Under the optimized crosslinking conditions, G2.NH2 dendrimers partially modified with fluorescein isothiocyanate (FI) or folic acid (FA) were used to crosslink γ-PGA NFs. Our results reveal that G2.NH2-FI is able to simultaneously render the NFs with good water stability and fluorescence property, while G2.NH2-FA is able to simultaneously endow the NFs with water stability and the ability to capture FA receptor-overexpressing cancer cells in vitro via ligand-receptor interaction. With the tunable dendrimer surface chemistry, multifunctional water-stable γ-PGA-based NFs may be generated via a dendrimer crosslinking approach, thereby providing diverse applications in the areas of biosensing, tissue engineering, drug delivery, and environmental sciences.

Evaluation of PEG and mPEG-co-(PGA-co-PDL) microparticles loaded with sodium diclofenac

PubMed Central

Tawfeek, Hesham M.

2013-01-01

The aim of this study was to synthesize and evaluate novel biodegradable polyesters namely; poly(ethylene glycol)-Poly(glycerol adipate-co-ω-pentadecalactone), PEG-PGA-co-PDL-PEG, and poly(ethylene glycol methyl ether)-Poly(glycerol adipate-co-ω-pentadecalactone), PGA-co-PDL-PEGme as an alternative sustained release carrier for lung delivery compared with non-PEG containing polymer PGA-co-PDL. The co-polymers were synthesized through lipase catalysis ring opening polymerization reaction and characterized using GPC, FT-IR, 1H-NMR and surface contact angle. Furthermore, microparticles containing a model hydrophilic drug, sodium diclofenac, were prepared via spray drying from a modified single emulsion and characterized for their encapsulation efficiency, geometrical particle size, zeta potential, tapped density, primary aerodynamic diameter, amorphous nature, morphology, in vitro release and the aerosolization performance. Microparticles fabricated from mPEG-co-polymer can be targeted to the lung periphery with an optimum in vitro deposition. Furthermore, a significantly higher in vitro release (p > 0.05, ANOVA/Dunnett’s) was observed with the PEG and mPEG-co-polymers compared to PGA-co-PDL. In addition, these co-polymers have a good safety profile upon testing on human bronchial epithelial, 16HBE14o- cell lines. PMID:24227959

Effects of metabolic pathway precursors and polydimethylsiloxane (PDMS) on poly-(gamma)-glutamic acid production by Bacillus subtilis BL53.

PubMed

de Cesaro, Alessandra; da Silva, Suse Botelho; Ayub, Marco Antônio Záchia

2014-09-01

The aims of this study were to evaluate the effects of the addition of metabolic precursors and polydimethylsiloxane (PDMS) as an oxygen carrier to cultures of Bacillus subtilis BL53 during the production of γ-PGA. Kinetics analyses of cultivations of different media showed that B. subtilis BL53 is an exogenous glutamic acid-dependent strain. When the metabolic pathway precursors of γ-PGA synthesis, L-glutamine and a-ketoglutaric acid, were added to the culture medium, production of the biopolymer was increased by 20 % considering the medium without these precursors. The addition of 10 % of the oxygen carrier PDMS to cultures caused a two-fold increase in the volumetric oxygen mass transfer coefficient (kLa), improving γ-PGA production and productivity. Finally, bioreactor cultures of B. subtilis BL53 adopting the combination of optimized medium E, added of glutamine, α-ketoglutaric acid, and PDMS, showed a productivity of 1 g L(-1) h(-1) of g-PGA after only 24 h of cultivation. Results of this study suggest that the use of metabolic pathway precursors glutamine and a-ketolgutaric acid, combined with the addition of PDMS as an oxygen carrier in bioreactors, can improve γ-PGA production and productivity by Bacillus strains .

Citizen earthquake alert using near real time PGA estimation from a local array combining a variety of accelerometric instruments

NASA Astrophysics Data System (ADS)

Melis, Nikolaos S.; Konstantinou, Konstantinos; Kalogeras, Ioannis; Sokos, Efthimios; Tselentis, G.-Akis

2017-04-01

It is of a great importance to assess rapidly the intensity of a felt event in a highly populated environment. Rapid and reliable information plays a key role to decision making responses, by performing correctly the first steps after a felt ground shaking. Thus, it is important to accurately respond to urgent societal demand using reliable information. A strong motion array is under deployment and trial operation in the area of Patras, Greece. It combines: (a) standard accelerometric stations operated by the National Observatory of Athens, Institute of Geodynamics (NOA), (b) QCN-type USB MEMS acceleration sensors deployed in schools and (c) P-alert MEMS acceleration devices deployed in public sector buildings as well as in private dwellings. The array intends to cover the whole city of Patras and the populated suburbs. All instruments are operating in near real time and they are linked to a combined Earthworm - SeisComP3 server at NOA, Athens. Rapid intensity estimation can be also performed by the P-alert accelerometers locally, but the performance of a near real time intensity estimation system is under operation at NOA. The procedure is based on observing the maximum PGA value at each instrument and empirically estimate the corresponding intensity. The values are also fed to a SeisComP3 based ShakeMap procedure that is served at NOA and uses the scwfparam module of SeisComP3. Earthquake activity has been recorded so far from the western Corinth Gulf, the Ionian Islands and Achaia-Elia area, western Peloponnesus. The first phase involves correlation tests of collocated instruments and assessment of their performance to low intensity as well as to strongly felt events in the Patras city area. Steps of expanding the array are also under consideration, in order to cover the wider area of northwestern Peloponnesus and Ionian islands.

Site Characterization at Napa Strong Motion Sites Using Tomography, MASW, and MALW

NASA Astrophysics Data System (ADS)

Chan, J. H.; Catchings, R.; Goldman, M.; Criley, C.

2015-12-01

The 24 August 2014 Mw 6.0 South Napa earthquake caused $300 million in damage to private and commercial properties. Previous studies indicate areas underlain by deposits with low average shear-wave velocity to 30 m depth (Vs30) can experience extensive structural damage during earthquakes. Thus, Vs30 is considered a predictor of the influence of local geology on strong shaking from earthquakes. The goal of our study was to evaluate Vs30 at six accelerograph stations in the City and County of Napa and in the City of Vallejo. We used active seismic sources and 4.5-Hz sensors recorded on 120 channels to investigate the shallow velocity structure. Geophones and shots were spaced at 3 m along each profile, which ranged in length from 85 to 260 m. We used a 226-kg accelerated weight-drop and a seisgun to generate P and Rayleigh waves for P-wave tomography and MASW, and we used a 3.5-kg sledgehammer and block to generate S and Love waves for S-wave tomography and MALW. One of the six accelerographs was housed inside Napa Fire Station #3, where the local surface geology consists of late Pleistocene to Holocene alluvium and alluvial fan deposits. The average Vs30 determined from MASW (Rayleigh waves) is 312 m/s, and the average Vs30 from MALW (Love waves) is 340 m/s, with an average velocity difference of about 8% between the two methods. These average values are both slightly less than the average Vs30 of 375 m/s determined from S-wave tomography, which suggests the three methods are complimentary and can be useful in evaluating site response. The 0.42g median horizontal peak ground acceleration (PGA) recorded at Napa Fire Station #3 indicates the area experienced strong shaking during the Mw 6.0 South Napa earthquake, consistent with expectations for a site with relatively low average Vs30.

Glutamate dehydrogenase (RocG) in Bacillus licheniformis WX-02: Enzymatic properties and specific functions in glutamic acid synthesis for poly-γ-glutamic acid production.

PubMed

Tian, Guangming; Wang, Qin; Wei, Xuetuan; Ma, Xin; Chen, Shouwen

2017-04-01

Poly-γ-glutamic acid (γ-PGA), a natural biopolymer, is widely used in cosmetics, medicine, food, water treatment, and agriculture owing to its features of moisture sequestration, cation chelation, non-toxicity and biodegradability. Intracellular glutamic acid, the substrate of γ-PGA, is a limiting factor for high yield in γ-PGA production. Bacillus subtilis and Bacillus licheniformis are both important γ-PGA producing strains, and B. subtilis synthesizes glutamic acid in vivo using the unique GOGAT/GS pathway. However, little is known about the glutamate synthesis pathway in B. licheniformis. The aim of this work was to characterize the glutamate dehydrogenase (RocG) in glutamic acid synthesis from B. licheniformis with both in vivo and in vitro experiments. By re-directing the carbon flux distribution, the rocG gene deletion mutant WX-02ΔrocG produced intracellular glutamic acid with a concentration of 90ng/log(CFU), which was only 23.7% that of the wild-type WX-02 (380ng/log(CFU)). Furthermore, the γ-PGA yield of mutant WX-02ΔrocG was 5.37g/L, a decrease of 45.3% compared to the wild type (9.82g/L). In vitro enzymatic assays of RocG showed that RocG has higher affinity for 2-oxoglutarate than glutamate, and the glutamate synthesis rate was far above degradation. This is probably the first study to reveal the glutamic acid synthesis pathway and the specific functions of RocG in B. licheniformis. The results indicate that γ-PGA production can be enhanced through improving intracellular glutamic acid synthesis. Copyright © 2017 Elsevier Inc. All rights reserved.

Mesenchymal stem cell recruitment by stromal derived factor-1-delivery systems based on chitosan/poly(γ-glutamic acid) polyelectrolyte complexes.

PubMed

Gonçalves, Raquel M; Antunes, Joana C; Barbosa, Mário A

2012-04-10

Human mesenchymal stem cells (hMSCs) have an enormous potential for tissue engineering and cell-based therapies. With a potential of differentiation into multiple lineages and immune-suppression, these cells play a key role in tissue remodelling and regeneration. Here a method of hMSC recruitment is described, based on the incorporation of a chemokine in Chitosan (Ch)/Poly(γ-glutamic acid) (γ-PGA) complexes. Ch is a non-toxic, cationic polysaccharide widely investigated. γ-PGA is a hydrophilic, non-toxic, biodegradable and negatively charged poly-amino acid. Ch and γ-PGA, being oppositely charged, can be combined through electrostatic interactions. These biocompatible structures can be used as carriers for active substances and can be easily modulated in order to control the delivery of drugs, proteins, DNA, etc. Using the layer-by-layer method, Ch and γ-PGA were assembled into polyelectrolyte multilayers films (PEMs) with thickness of 120 nm. The chemokine stromal-derived factor-1 (SDF-1) was incorporated in these complexes and was continuously released during 120 h. The method of SDF-1 incorporation is of crucial importance for polymers assembly into PEMs and for the release kinetics of this chemokine. The Ch/γ-PGA PEMs with SDF-1 were able to recruit hMSCs, increasing the cell migration up to 6 fold to a maximum of 16.2 ± 4.9 cells/mm2. The controlled release of SDF-1 would be of great therapeutic value in the process of hMSC homing to injured tissues. This is the first study suggesting Ch/γ-PGA PEMs as SDF-1 reservoirs to recruit hMSCs, describing an efficient method of chemokine incorporation that allows a sustained released up to 5 days and that can be easily scaled-up.

Establishment of cell lines from adult T-cell leukemia cells dependent on negatively charged polymers.

PubMed

Kagami, Yoshitoyo; Uchiyama, Susumu; Kato, Harumi; Okada, Yasutaka; Seto, Masao; Kinoshita, Tomohiro

2017-07-05

Growing adult T-cell leukemia/lymphoma (ATLL) cells in vitro is difficult. Here, we examined the effects of static electricity in the culture medium on the proliferation of ATLL cells. Six out of 10 ATLL cells did not proliferate in vitro and thus had to be cultured in a medium containing negatively charged polymers. In the presence of poly-γ-glutamic acid (PGA) or chondroitin sulfate (CDR), cell lines (HKOX3-PGA, HKOX3-CDR) were established from the same single ATLL case using interleukin (IL)-2, IL-4, and feeder cells expressing OX40L (OX40L + HK). Dextran sulfate inhibited growth in both HKOX3 cell lines. Both PGA and OX40L + HK were indispensable for HKOX3-PGA growth, but HKOX3-CDR could proliferate in the presence of CDR or OX40L + HK alone. Thus, the specific action of each negatively charged polymer promoted the growth of specific ATLL cells in vitro.

Absorbable screws through the greater trochanter do not disturb physeal growth: rabbit experiments.

PubMed

Gil-Albarova, J; Fini, M; Gil-Albarova, R; Melgosa, M; Aldini-Nicolo, N; Giardino, R; Seral, F

1998-06-01

We studied the effect of implantation of self-reinforced polyglycolic acid (SR-PGA) screws through the greater trochanter in rabbits. 15 rabbits aged 10 weeks had an SR-PGA screw inserted through the left trochanter physis. A similar drilling was made through the right greater trochanter without screw implantation. The animals were assigned to 3 groups of 5, and were killed after 1, 2 or 3 months. Radiographs of both femurs were obtained monthly and the articulo-trochanteric distance and the neck-shaft angle were measured. After killing the animals, a histological study was performed. The drilling on the right trochanter generated a bony bridge in all the animals. The SR-PGA screws did not give rise to an epiphysiodesis. The progressive peripheral degradation of the implants gave rise to the formation of only modest bridges, which were smaller in size than those observed in the control trochanter. Our findings suggest that absorbable PGA screws implanted through a growth plate cause only minor bone formation and no epiphyseodesis.

Deep slip distribution and rupture directivity enhance shaking during the 2017 Mw 8.2 Chiapas earthquake

NASA Astrophysics Data System (ADS)

Chen, K.; Feng, W.; Liu, Z.; Song, T.

2017-12-01

As the largest intraplate normal faulting event ever recorded, the 2017 Mw 8.2 Mexico Chiapas earthquake is strongly felt as far as Mexico City that is almost 720 km northwest of the epicenter, causing tsunami with a maximum wave height of about six feet. In this contribution, we model this event by joint inversion of static GPS offsets, 1-Hz GPS displacement waveforms, InSAR observations and teleseismic P waves. To validate the preferred model determined from this study, we run tsunami simulation based on the synthetic sea floor deformation and compare it with tsunami records. Our results show that this earthquake took place near the "bending point" of subduction interface in SLAB 1.0, where seismic energy was accumulated. It propagated mainly unilaterally towards to the northwest of the epicenter at a relatively high speed ( 2.8 km/s), and at least two asperities were identified. The dominant one is centered at depth from 40 to 60 km while the second patch is relatively shallow at about 20 km depth. The peak slip is approximately 12 meters and the total released energy is 2.7e+21 Nm, equal to Mw 8.2. Note that the peak ground acceleration (PGA) recorded along the propagation direction is tens of times larger than that recorded in the opposite direction with nearly identical epicentral distances (about 700 km), and clear co-seismic dynamic displacement waveforms (up to 5 cm) are observed at a GPS station with 1450 km epicentral distance. Based on these preliminary results, we suggest that the deep slip in the low attenuation mantle and rupture directivity may contribute to the nationwide ground shaking, and the shallow slip induces evident vertical surface displacements, which amplify local tsunami heights. Keywords: Chiapas earthquake, joint inversion, tsunami, rupture directivity

In vitro removal of toxic heavy metals by poly(γ-glutamic acid)-coated superparamagnetic nanoparticles

PubMed Central

Inbaraj, Baskaran Stephen; Chen, Bing-Huei

2012-01-01

Background: Chelation therapy involving organic chelators for treatment of heavy metal intoxication can cause cardiac arrest, kidney overload, mineral deficiency, and anemia. Methods: In this study, superparamagnetic iron oxide nanoparticles (SPIONs) modified with an edible biopolymer poly(γ-glutamic acid) (PGA) were synthesized by coprecipitation method, characterized and evaluated for their removal efficiency of heavy metals from a metal solution, and simulated gastrointestinal fluid (SGIF). Results: Instrumental characterization of bare- and PGA-SPIONs revealed 7% coating of PGA on SPIONs with a spherical shape and an iron oxide spinel structure belonging to magnetite. The particle sizes as determined from transmission electron microscopy images were 8.5 and 11.7 nm for bare- and PGA-SPIONs, respectively, while the magnetization values were 70.3 and 61.5 emu/g. Upon coating with PGA, the zeta potentials were shifted from positive to negative at most of the environmental pH (3–8) and biological pH (1–8), implying good dispersion in aqueous suspension and favorable conditions for heavy metal removal. Batch studies showed rapid removal of lead and cadmium with the kinetic rates estimated by pseudo-second-order model being 0.212 and 0.424 g/mg·min, respectively. A maximum removal occurred in the pH range 4–8 in deionized water and 5–8 in SGIF corresponding to most gastrointestinal pH except for the stomach. Addition of different ionic strengths (0.001–1 M sodium acetate) and essential metals (Cu, Fe, Zn, Mg, Ca, and K) did not show any marked influence on lead removal by PGA-SPIONs, but significantly reduced the binding of cadmium. Compared to deionized water, the lead removal from SGIF was high at all pH with the Langmuir monolayer removal capacity being 98.70 mg/g for the former and 147.71 mg/g for the latter. However, a lower cadmium removal capacity was shown for SGIF (23.15 mg/g) than for deionized water (31.13 mg/g). Conclusion: These results suggest that PGA-SPIONs could be used as a metal chelator for clinical treatment of metal poisoning. PMID:22927758

Can North Korean Nuclear Explosions Stir Baekdu (Changbai) Volcano to be Erupted?

NASA Astrophysics Data System (ADS)

Hong, T. K.; Choi, E.; Park, S.; Shin, J. S.

2015-12-01

Potential volcanic eruption in Mt. Baekdu (Changbai) hasbeen a long-lasting concern in the far-eastern Asia.There were several explosive eruptions historically. Themost recent eruption was made in 1903. The eruption in969 is believed to be the most violent with volcanicexplosivity index of 7. The volcano is located in ~130 kmaway from the North Korean nuclear explosion test sitewhere three moderate-size nuclear explosions withmagnitudes of 4.3, 4.7 and 5.1 were conducted in 2006,2009 and 2013. There is increasing concern that a largenuclear explosion may trigger volcanic eruption. Seismicwaveforms are subtle to vary with the crustal structure.The strong ground motions generated by a potential largenuclear explosion are difficult to be simulated forvolcanic regions where complex crustal structures areexpected. We calculate the ground motions by hypotheticallarge nuclear explosions using a nuclear-explosion sourcemodel and the seismic waveforms of prior nuclearexplosions. The validity of the method is examined bycomparing the observed and quasi-synthetic seismicwaveforms of prior nuclear explosions. The peak groundaccelerations (PGA) around the volcano are estimated froma PGA attenuation equation that was determined based onseismic waveforms from natural earthquakes. Thehorizontal and vertical PGAs by an M7.0 undergroundnuclear explosion are expected to reach 0.14 and 0.11m/s2 at the volcano, inducing a dynamic stress in themagma chamber. The induced pressure change in the magmachamber is verified by numerical modeling of dynamicstress changes.

Clinical evaluation of coverage of open wounds: Polyglycolic acid sheet with fibrin glue spray vs split thickness skin

PubMed Central

Mochizuki, Yumi; Tomioka, Hirofumi; Tushima, Fumihiko; Shimamoto, Hiroaki; Hirai, Hideaki; Oikawa, Yuu; Harada, Hiroyuki

2016-01-01

Purpose: This study aimed to evaluate the coverage of oral wounds using either a polyglycolic acid (PGA) sheet or split-thickness skin grafting (STSG). Materials and Methods: A total of 119 cases of wound coverage using a PGA sheet and fibrin glue spray as well as 132 cases of wound coverage cases using STSG were reviewed retrospectively. The site of the excision area, perioperative conditions, and postoperative functional problems were evaluated. Results: The PGA group had significantly shorter operation time, earlier start of oral intake, and shorter hospitalization than the STSG group. If the PGA sheet over the wound with exposed bone could be protected by a surgical sprint, oral food intake could be started on the day after surgery at the earliest. When the size of the wound in the buccal excisional area was classified into two groups (<6 or ≥6 cm2), mouth opening in the STSG group was significantly larger at 3 months postoperatively. When the size of the wound in the tongue and floor of mouth was classified into two groups (<12 or ≥12 cm2), the STSG group had a significantly higher score in postoperative speech intelligibility. Conclusion: Selection of a PGA sheet or STSG based on the consideration of defect size, tumor location, patients’ local and general condition and tolerance for surgery could reduce the patients’ postsurgical dysfunctional problems. PMID:28299263

Novel electrochemical immune sensor based on Hep-PGA-PPy nanoparticles for detection of α-Fetoprotein in whole blood.

PubMed

Xu, Tingting; Chi, Bo; Gao, Jian; Chu, Meilin; Fan, Wenlu; Yi, Meihui; Xu, Hong; Mao, Chun

2017-07-18

A simple and accurate immune sensor for quantitative detection of α-Fetoprotein (AFP) was developed based on the immobilization of antigen on the surface of Hep-PGA-PPy nanoparticles modified glassy carbon electrodes (GCE). The obtained Hep-PGA-PPy nanoparticles were characterized by fourier transform infrared (FT-IR) spectra and transmission electron microscopy (TEM). And the blood compatibility of Hep-PGA-PPy nanoparticles was investigated by in vitro coagulation tests, hemolysis assay and whole blood adhesion tests. Combining the conductive property of polypyrrole (PPy) and the biocompatibility of heparin (Hep), the Hep-PGA-PPy nanoparticles could improve not only the anti-biofouling effect the electrode, but also improved the electrochemical properties of the immune sensor. Under optimal conditions, the proposed immune sensor could detect AFP in a linear range from 0.1 to 100 ng mL -1 with a detection limit of 0.099 ng mL -1 at the signal-to-noise ratio of 3, and it also possessed good reproducibility and storage stability. Furthermore, the detection of AFP in five human blood samples also showed satisfactory accuracy with low relative errors. Thus, the developed immune sensor which showed acceptable reproducibility, selectivity, stability and accuracy could be potentially used for the detection of whole blood samples directly. Copyright © 2017. Published by Elsevier B.V.

Injury Prevention in Aircraft Crashes: Investigative Techniques and Applications (la Prevention des lesions lors des accidents d’ avions: les techniques d’investigation et leurs applications)

DTIC Science & Technology

1998-02-01

provide the aircrew and passengers with a level of protection commensurate with the risk of operating aircraft in the military and civilian...the time taken to reach peak acceleration and upon the peak acceleration level attained. Long duration acceleration, which can be experienced in...acceleration depends principally on the plateau level of the acceleration imposed on the body, as the response to long duration acceleration is due

Pics d'accélération du mouvement sismique observés lors du séisme de Chichi à Taiwan : application à l'estimation de l'aléa sismiqueAnalysis of peak ground accelerations during the Chichi earthquake, Taiwan: application to seismic hazard evaluation

NASA Astrophysics Data System (ADS)

Chang, Tsui-Yu; Cotton, Fabrice; Angelier, Jacques; Shin, Tzay-Chyn

2001-07-01

Attenuation laws are widely used in order to estimate the peak ground acceleration that may occur at a given locality during an earthquake, for hazard evaluation purposes. However, these simplified laws should be regarded acceptable only in the first approximation, because numerous significant parameters at the local and regional scales are often ignored. We examined the relationship between distance and peak acceleration based on examples from the dense accelerometric network of Taiwan, specifically for the Chichi destructive earthquake. We thus observed significant discrepancies between the predicted and observed accelerations, resulting from (1) near-field saturation, (2) amplification in sedimentary basins, and (3) hanging wall effect. We mapped the residual accelerations (difference between observed and predicted peak ground accelerations). This highlights the role of the regional structure, independently revealed by the geological analysis, as a significant factor that controls the transmission of the seismic accelerations.

The Impact of Biogenic and Anthropogenic Atmospheric Aerosol on Climate in Egypt

NASA Astrophysics Data System (ADS)

Ibrahim, A. I.; Zakey, A.; Steiner, A. L.; Shokr, M. E.; El-Raey, M.; Ahmed, Y.; Al-Hadidi, A.; Zakey, A.

2014-12-01

Aerosols are indicators of air quality as they reduce visibility and adversely affect public health. Aerosol optical depth (AOD) is a measure of the radiation extinction due to interaction of radiation with aerosol particles in the atmosphere. Using this optical measure of atmospheric aerosols we explore the seasonal and annual patterns of aerosols from both anthropogenic and biogenic sources over Egypt. Here, we use an integrated environment-climate-aerosol model in conjunction with inversion technique to identify the aerosol particle size distribution over different locations in Egypt. The online-integrated Environment-Climate-Aerosol model (EnvClimA), which is based on the International Center for Theoretical Physics Regional Climate Model (ICTP-RegCM), is used to study the emission of different aerosols and their impact on climate parameters for a long-term base line simulation run over Egypt and North Africa. The global emission inventory is downscaled and remapping them over Egypt using local factors such as population, traffic and industrial activities to identify the sources of anthropogenic and biogenic emission from local emission over Egypt. The results indicated that the dominant natural aerosols over Egypt are dust emissions that frequently occur during the transitional seasons (Spring and Autumn). From the local observation we identify the number of dust and sand storm occurrences over Egypt. The Multiangle Imaging SpectroRadiometer (MISR) is used to identify the optical characterizations of different types of aerosols over Egypt. Modeled aerosol optical depth and MISR observed (at 555 nm) are compared from March 2000 through November 2013. The results identify that the MISR AOD captures the maximum peaks of AOD in March/April that coincide with the Khamasin dust storms. However, peaks in May are either due to photochemical reactions or anthropogenic activities. Note: This presentation is for a Partnerships for Enhanced Engagement in Research (PEER) project sponsored by USAID/NSF/NAS. Project Link (at National Academies website): http://sites.nationalacademies.org/PGA/dsc/peerscience/PGA_084046.htmwebsite: http://CleanAirEgypt.org

Continuous estimates on the earthquake early warning magnitude by use of the near-field acceleration records

NASA Astrophysics Data System (ADS)

Li, Jun; Jin, Xing; Wei, Yongxiang; Zhang, Hongcai

2013-10-01

In this article, the seismic records of Japan's Kik-net are selected to measure the acceleration, displacement, and effective peak acceleration of each seismic record within a certain time after P wave, then a continuous estimation is given on earthquake early warning magnitude through statistical analysis method, and Wenchuan earthquake record is utilized to check the method. The results show that the reliability of earthquake early warning magnitude continuously increases with the increase of the seismic information, the biggest residual happens if the acceleration is adopted to fit earthquake magnitude, which may be caused by rich high-frequency components and large dispersion of peak value in acceleration record, the influence caused by the high-frequency components can be effectively reduced if the effective peak acceleration and peak displacement is adopted, it is estimated that the dispersion of earthquake magnitude obviously reduces, but it is easy for peak displacement to be affected by long-period drifting. In various components, the residual enlargement phenomenon at vertical direction is almost unobvious, thus it is recommended in this article that the effective peak acceleration at vertical direction is preferred to estimate earthquake early warning magnitude. Through adopting Wenchuan strong earthquake record to check the method mentioned in this article, it is found that this method can be used to quickly, stably, and accurately estimate the early warning magnitude of this earthquake, which shows that this method is completely applicable for earthquake early warning.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Anderson, John

This project aims to understand the characteristics of the free-field strong-motion records that have yielded the 100 largest peak accelerations and the 100 largest peak velocities recorded to date. The peak is defined as the maximum magnitude of the acceleration or velocity vector during the strong shaking. This compilation includes 35 records with peak acceleration greater than gravity, and 41 records with peak velocities greater than 100 cm/s. The results represent an estimated 150,000 instrument-years of strong-motion recordings. The mean horizontal acceleration or velocity, as used for the NGA ground motion models, is typically 0.76 times the magnitude of thismore » vector peak. Accelerations in the top 100 come from earthquakes as small as magnitude 5, while velocities in the top 100 all come from earthquakes with magnitude 6 or larger. Records are dominated by crustal earthquakes with thrust, oblique-thrust, or strike-slip mechanisms. Normal faulting mechanisms in crustal earthquakes constitute under 5% of the records in the databases searched, and an even smaller percentage of the exceptional records. All NEHRP site categories have contributed exceptional records, in proportions similar to the extent that they are represented in the larger database.« less

Symptom Characteristics and Medical History of an Online Sample of Women Who Experience Symptoms of Persistent Genital Arousal.

PubMed

Jackowich, Robyn; Pink, Leah; Gordon, Allan; Poirier, Évéline; Pukall, Caroline F

2018-02-17

Persistent genital arousal disorder (PGAD; Leiblum & Nathan, 2001 ) is characterized by distressing symptoms suggestive of genital arousal in the absence of subjective feelings of arousal. Although awareness of PGAD is growing, there continues to be a lack of systematic research on it. This study characterized an online sample of women with symptoms of persistent genital arousal (PGA) in terms of their symptom characteristics, medical comorbidities, symptom triggers, management strategies, and predictors of distress. Women reported diverse PGA symptoms, with almost half reporting painful symptoms, and most reported very high distress and negative emotions. Further research and awareness of PGA are needed to provide effective care for this population.

Low Voltage Current-Reused Pseudo-Differential Programmable Gain Amplifier

NASA Astrophysics Data System (ADS)

Nguyen, Huy-Hieu; Lee, Jeong-Seon; Lee, Sang-Gug

This paper reports a current-reused pseudo-differential (CRPD) programmable gain amplifier (PGA) that demonstrates small size, low power, wide band, low noise, and high linearity operation with 4 control bits. Implemented in 0.18um CMOS technology, the PGA shows the gain range from -9.9 to 8.3dB with gain error of less than ±0.38dB. The IIP3, P1dB, and smallest 3-dB bandwidth are 10.5 to 27dBm, -9 to 9.5dBm, and 250MHz, respectively. The PGA occupies the chip area of 0.04mm2 and consumes only 460 µA from a 1.2V supply.

Eco-friendly combination of the immobilized PGA enzyme and the S-Phacm protecting group for the synthesis of Cys-containing peptides.

PubMed

Góngora-Benítez, Miriam; Basso, Alessandra; Bruckdorfer, Thomas; Royo, Miriam; Tulla-Puche, Judit; Albericio, Fernando

2012-12-07

Enzyme-labile protecting groups have emerged as a green alternative to conventional protecting groups. These groups introduce a further orthogonal dimension and eco-friendliness into protection schemes for the synthesis of complex polyfunctional organic molecules. S-Phacm, a Cys-protecting group, can be easily removed by the action of a covalently immobilized PGA enzyme under very mild conditions. Herein, the versatility and reliability of an eco-friendly combination of the immobilized PGA enzyme and the S-Phacm protecting group has been evaluated for the synthesis of diverse Cys-containing peptides. Copyright © 2012 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Developing bioactive composite scaffolds for bone tissue engineering

NASA Astrophysics Data System (ADS)

Chen, Yun

Poly(L-lactic acid) (PLLA) films were fabricated using the method of dissolving and evaporation. PLLA scaffold was prepared by solid-liquid phase separation of polymer solutions and subsequent sublimation of solvent. Bonelike apatite coating was formed on PLLA films, PLLA scaffolds and poly(glycolic acid) (PGA) scaffolds in 24 hours through an accelerated biomimetic process. The ion concentrations in the simulated body fluid (SBF) were nearly 5 times of those in human blood plasma. The apatite formed was characterized using scanning electron microscopy (SEM), energy dispersive X-ray spectroscopy (EDX), X-ray diffraction (XRD), and Fourier transform infrared spectroscopy (FTIR). The apatite formed in 5SBF was similar in morphology and composition to that formed in the classical biomimetic process employing SBF or 1.5SBF, and similar to that of natural bone. This indicated that the biomimetic apatite coating process could be accelerated by using concentrated simulated body fluid at 37°C. Besides saving time, the accelerated biomimetic process is particularly significant to biodegradable polymers. Some polymers which degrade too fast to be coated with apatite by a classical biomimetic process, for example PGA, could be coated with bone-like apatite in an accelerated biomimetic process. Collagen and apatite were co-precipitated as a composite coating on poly(L-lactic acid) (PLLA) in an accelerated biomimetic process. The incubation solution contained collagen (1g/L) and simulated body fluid (SBF) with 5 times inorganic ionic concentrations as human blood plasma. The coating formed on PLLA films and scaffolds after 24 hours incubation was characterized using EDX, XRD, FTIR, and SEM. It was shown that the coating contained carbonated bone-like apatite and collagen, the primary constituents of natural bone. SEM showed a complex composite coating of submicron bone-like apatite particulates combined with collagen fibrils. This work provided an efficient process to obtain bone-like apatite/collagen composite coating. Saos-2 osteoblast-like cells were used to evaluate the cellular behaviors on these biomimetic coatings. Cell morphologies on the surfaces of PLLA films and scaffolds, PLLA films and scaffolds with apatite coating, and PLLA films and scaffolds with apatite/collagen composite coating were studied by SEM. Cell viability was assessed by the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrasodium bromide (MTT) assay. In addition, differentiated cell function was assessed by measuring alkaline phosphatase activity. These results suggested that the apatite coating and apatite/collagen composite coating fabricated through the accelerated biomimetic processes could improve the interactions between osteoblasts and PLLA. The composite coating was more effective than apatite coating in improving such interactions. PLLA scaffolds coated with submicron collagen fibrils and submicron apatite paticulates are expected to be one of the promising 3D substrates for bone tissue engineering. To facilitate coating into scaffolds, the flowing condition was introduced into the accelerated biomimetic process. The apatite formed in the different sites in the scaffold was characterized using SEM. It was found that the accelerated biomimetic process performed in the flowing condition yielded more uniform spatial distribution of apatite particles than that in the regular shaking condition. This work provides a novel condition for obtaining uniform spatial distribution of bone-like apatite within the scaffolds in a timely manner, which is expected to facilitate uniform distribution of attached cells within the scaffoldsin vitro and in vivo.

Empirical Site Amplification Factors Incorporating Soil Nonlinearity in Taiwan

NASA Astrophysics Data System (ADS)

Kuo, C. H.; Chung, C. H.; Che-Min, L.; Huang, J. Y.; Wen, K. L.

2017-12-01

Characteristics of site amplifications caused by both crustal and subduction earthquakes are important in Taiwan. For example, seismic waves were amplified and led to significant building damages in the Taipei Basin by the 1986 Hualien offshore (subduction interface) and the 1999 Chi-Chi earthquakes (crustal), for which the epicentral distances were about 100 km. To understand local site amplifications in Taiwan, empirical site amplification factors for horizontal ground motions are studied using recently constructed strong motion and site databases for the free-field TSMIP stations in Taiwan. Records of large magnitude earthquakes of ML larger than six from 1994 to 2014 were selected for this study. Site amplification factors at site conditions with Vs30 of 120 m/s to 1500 m/s and base accelerations up to 0.7g were inferred from intensity ratios of station pairs within specific distances. The reference site condition is assumed as Vs30 of 760 m/s (B/C boundary). Preliminary results indicate: 1. Soil nonlinearity is more obviously at short periods (PGA, Sa0.3) than long periods (PGV, Sa1.0). 2. Soil nonlinearity is significant for stations belong to site classes of B, C, D, and E in Taiwan. 3. Effect of station-pair distance is seen at short periods (PGA and Sa0.3). 4. No significant different is found in site amplifications of crustal and subduction earthquakes. The result could be a reference for the Fa and Fv in Taiwan's building code.

Prostaglandins modify phosphorylation of specific proteins in the insect cell line BCIRL-HzAM1

USDA-ARS?s Scientific Manuscript database

Prostaglandins (PGs) play crucial roles in vertebrate biology, particularly in immune functions. Because PGs also mediate specific cell functions in insect immunity, we are investigating how these signaling molecules affect insect cells. We reported that PGs, notably PGA1, PGA2, and PGE1, up and/or ...

Bioresponsive Materials for Drug Delivery Based on Carboxymethyl Chitosan/Poly(γ-Glutamic Acid) Composite Microparticles

PubMed Central

Yan, Xiaoting; Tong, Zongrui; Chen, Yu; Mo, Yanghe; Feng, Huaiyu; Li, Peng; Qu, Xiaosai; Jin, Shaohua

2017-01-01

Carboxymethyl chitosan (CMCS) microparticles are a potential candidate for hemostatic wound dressing. However, its low swelling property limits its hemostatic performance. Poly(γ-glutamic acid) (PGA) is a natural polymer with excellent hydrophilicity. In the current study, a novel CMCS/PGA composite microparticles with a dual-network structure was prepared by the emulsification/internal gelation method. The structure and thermal stability of the composite were determined by Fourier transform infrared spectroscopy (FTIR), X-ray powder diffraction (XRD), scanning electron microscope (SEM), X-ray photoelectron spectroscopy (XPS), and thermogravimetric analysis (TGA). The effects of preparation conditions on the swelling behavior of the composite were investigated. The results indicate that the swelling property of CMCS/PGA composite microparticles is pH sensitive. Levofloxacin (LFX) was immobilized in the composite microparticles as a model drug to evaluate the drug delivery performance of the composite. The release kinetics of LFX from the composite microparticles with different structures was determined. The results suggest that the CMCS/PGA composite microparticles are an excellent candidate carrier for drug delivery. PMID:28452963

Mercury and gold concentrations of highly polluted environmental samples determined using prompt gamma-ray analysis and instrument neutron activation analysis

NASA Astrophysics Data System (ADS)

Osawa, Takahito; Hatsukawa, Yuichi; Appel, Peter W. U.; Matsue, Hideaki

2011-04-01

The authors have established a method of determining mercury and gold in severely polluted environmental samples using prompt gamma-ray analysis (PGA) and instrumental neutron activation analysis (INAA). Since large amounts of mercury are constantly being released into the environment by small-scale gold mining in many developing countries, the mercury concentration in tailings and water has to be determined to mitigate environmental pollution. Cold-vapor atomic absorption analysis, the most pervasive method of mercury analysis, is not suitable because tailings and water around mining facilities have extremely high mercury concentrations. On the other hand, PGA can determine high mercury concentrations in polluted samples as it has an appropriate level of sensitivity. Moreover, gold concentrations can be determined sequentially by using INAA after PGA. In conclusion, the analytical procedure established in this work using PGA and INAA is the best way to evaluate the degree of pollution and the tailing resource value. This method will significantly contribute to mitigating problems in the global environment.

Antioxidative pyranonigrins in rice mold starters and their suppressive effect on the expression of blood adhesion molecules.

PubMed

Miyake, Yoshiaki; Mochizuki, Mika; Ito, Chihiro; Itoigawa, Masataka; Osawa, Toshihiko

2008-06-01

Antioxidants having a 1,1-diphenyl-2-picrylhydrazyl (DPPH) radical scavenging capacity in rice mold starters, which are used for the preparation of various Japanese fermented foods, and their effectiveness against the expression of blood adhesion molecules were examined. An antioxidant was isolated from the rice mold starters used for shochu and identified as pyranonigrin-S (PG-S) by (1)H-NMR, (13)C-NMR, and FAB-MS analyses. It was a derivative of pyranonigrin-A (PG-A), which has been isolated as an antioxidant from the rice mold starters. Pyranonigrins PG-A and PG-S were found to exist in spores on rice mold starters which had been prepared by Aspergillus awamori, A. kawachii, and A. saitoi. PG-S exhibited a higher level of DPPH radical scavenging activity than PG-A. PG-A was found to have a significant suppressive effect on the expression of vascular cell adhesion molecule-1 (VCAM-1) in human umbilical vein endothelial cells (HUVECs) induced by tumor necrosis factor-alpha (TNF-alpha) (P<0.05).

Non-sterilized fermentative co-production of poly(γ-glutamic acid) and fibrinolytic enzyme by a thermophilic Bacillus subtilis GXA-28.

PubMed

Zeng, Wei; Li, Wei; Shu, Lin; Yi, Juyang; Chen, Guiguang; Liang, Zhiqun

2013-08-01

Poly(γ-glutamic acid), as a naturally occurring homopolymer, is widely used in industry, agriculture, food and medicine. Fibrinolytic enzyme has a great potential for the prevention and/or treatment of vascular diseases caused by fibrin clots. Co-production of γ-PGA and fibrinolytic enzyme by Bacillus subtilis GXA-28 (CCTCC M 2012347) from soybean residue using cane molasses and monosodium glutamate waste liquor under sterilized and non-sterilized condition were investigated. It was observed that total sugar from cane molasses of 3% (w/w) and glutamate from monosodium glutamate waste liquor of 2% (w/w) were favorable for γ-PGA and fibrinolytic enzyme co-production at pH 7.0 and 45°C. Based on the optimal medium, the γ-PGA and fibrinolytic activity reached 103.5 g/kg-substrates at 22 h and 986 U/g-substrates at 24h under non-sterilized condition, respectively. To our knowledge, the yield of γ-PGA was highest in all reported literatures. Copyright © 2013 Elsevier Ltd. All rights reserved.

Landing Characteristics of a Reentry Capsule with a Torus-Shaped Air Bag for Load Alleviation

NASA Technical Reports Server (NTRS)

McGehee, John R.; Hathaway, Melvin E.

1960-01-01

An experimental investigation has been made to determine the landing characteristics of a conical-shaped reentry capsule by using torus-shaped air bags for impact-load alleviation. An impact bag was attached below the large end of the capsule to absorb initial impact loads and a second bag was attached around the canister to absorb loads resulting from impact on the canister when the capsule overturned. A 1/6-scale dynamic model of the configuration was tested for nominal flight paths of 60 deg. and 90 deg. (vertical), a range of contact attitudes from -25 deg. to 30 deg., and a vertical contact velocity of 12.25 feet per second. Accelerations were measured along the X-axis (roll) and Z-axis (yaw) by accelerometers rigidly installed at the center of gravity of the model. Actual flight path, contact attitudes, and motions were determined from high-speed motion pictures. Landings were made on concrete and on water. The peak accelerations along the X-axis for landings on concrete were in the order of 3Og for a 0 deg. contact attitude. A horizontal velocity of 7 feet per second, corresponding to a flight path of 60 deg., had very little effect upon the peak accelerations obtained for landings on concrete. For contact attitudes of -25 deg. and 30 deg. the peak accelerations along the Z-axis were about +/- l5g, respectively. The peak accelerations measured for the water landings were about one-third lower than the peak accelerations measured for the landings on concrete. Assuming a rigid body, computations were made by using Newton's second law of motion and the force-stroke characteristics of the air bag to determine accelerations for a flight path of 90 deg. (vertical) and a contact attitude of 0 deg. The computed and experimental peak accelerations and strokes at peak acceleration were in good agreement for the model. The special scaling appears to be applicable for predicting full-scale time and stroke at peak acceleration for a landing on concrete from a 90 deg. flight path at a 0 deg. It appears that the full-scale approximately the same as those obtained from the model for the range of attitudes and flight paths investigated.

Tibial Acceleration and Spatiotemporal Mechanics in Distance Runners During Reduced-Body-Weight Conditions.

PubMed

Moran, Matthew F; Rickert, Brendan J; Greer, Beau K

2017-05-01

Treadmills that unload runners via a differential air-pressure (DAP) bladder (eg, AlterG Anti-Gravity Treadmill) are commonly used to reduce effective body weight (BW) in a clinical setting. However, the relationship between the level of unloading and tibial stress is currently unknown. To determine the relationship between tibial impact acceleration and level of BW unloading during running. Cross-sectional. University motion-analysis laboratory. 15 distance runners (9 male, 6 female; 20.4 ± 2.4 y, 60.1 ± 12.6 kg). Peak tibial acceleration and peak-to-peak tibial acceleration were measured via a uniaxial accelerometer attached to the tibia during a 37-min continuous treadmill run that simulated reduced-BW conditions via a DAP bladder. The trial began with a 10-min run at 100% BW followed by nine 3-min stages where BW was systematically reduced from 95% to 60% in 5% increments. There was no significant relationship between level of BW and either peak tibial acceleration or peak-to-peak tibial acceleration (P > .05). Both heart rate and step rate were significantly reduced with each 5% reduction in BW level (P < .01). Although ground-reaction forces are reduced when running in reduced-BW conditions on a DAP treadmill, tibial shock magnitudes are unchanged as an alteration in spatiotemporal running mechanics (eg, reduced step rate) and may nullify the unloading effect.

Periocular mexametric melanin and erythema indexes in adult glaucoma patients treated with topical prostaglandin analogs.

PubMed

Duman, Nilay; Duman, Reşat; Yavaş, Güliz Fatma; Doğruk Kaçar, Seval; Özuğuz, Pınar; Çetinkaya, Ersan

2017-03-01

Although topical prostaglandin analogs (PGAs) have been previously associated with periocular skin hyperpigmentation, studies using objective clinical methods are lacking. Furthermore changes in periocular skin erythema indexes associated with topical PGAs have not been reported previously. The purpose of the present study was to evaluate periocular melanin and erythema indexes in patients treated with topical PGA using an objective clinical method - Mexameter. About 45 glaucoma patients treated with topical PGA therapy, and 30 age-, and sex-matched controls were enrolled in the study. Demographic data, medical history including duration of therapy, PGA type, involved eye (unilateral, bilateral) were noted, and skin phototypes were evaluated. Melanin and erythema indexes on medial and lateral upper and lower eyelids, and normal skin from the upper cheeks were measured using Mexameter MX-18. The index of difference for lower/upper eyelid was calculated. Reading results of patients and controls were compared. Melanin and erythema indexes of upper/lower eyelids, and the index of differences for upper/lower eyelids were significantly higher in patients despite similar clinical findings (p < 0.05). Duration of therapy and type of PGA were not associated with skin changes (p > 0.05). Both periocular melanin and erythema indexes increased in both upper and lower eyelids due to PGA therapy compared to controls, despite similar clinical findings. Mexametric evaluation is more sensitive than clinical evaluation, and may be used as an objective, sensitive clinical method to evaluate periocular skin changes, even smallest changes, in such patients.

In vivo evaluation of cetuximab-conjugated poly(γ-glutamic acid)-docetaxel nanomedicines in EGFR-overexpressing gastric cancer xenografts.

PubMed

Sreeranganathan, Maya; Uthaman, Saji; Sarmento, Bruno; Mohan, Chethampadi Gopi; Park, In-Kyu; Jayakumar, Rangasamy

2017-01-01

Epidermal growth factor receptor (EGFR), upregulated in gastric cancer patients, is an oncogene of interest in the development of targeted cancer nanomedicines. This study demonstrates in silico modeling of monoclonal antibody cetuximab (CET MAb)-conjugated docetaxel (DOCT)-loaded poly(γ-glutamic acid) (γ-PGA) nanoparticles (Nps) and evaluates the in vitro/in vivo effects on EGFR-overexpressing gastric cancer cells (MKN-28). Nontargeted DOCT-γ-PGA Nps (NT Nps: 110±40 nm) and targeted CET MAb-DOCT-γ-PGA Nps (T Nps: 200±20 nm) were prepared using ionic gelation followed by 1-Ethyl-3-(3-dimethyl aminopropyl)carbodiimide-N-Hydoxysuccinimide (EDC-NSH) chemistry. Increased uptake correlated with enhanced cytotoxicity induced by targeted Nps to EGFR +ve MKN-28 compared with nontargeted Nps as evident from MTT and flow cytometric assays. Nanoformulated DOCT showed a superior pharmacokinetic profile to that of free DOCT in Swiss albino mice, indicating the possibility of improved therapeutic effect in the disease model. Qualitative in vivo imaging showed early and enhanced tumor targeted accumulation of CET MAb-DOCT-γ-PGA Nps in EGFR +ve MKN-28-based gastric cancer xenograft, which exhibited efficient arrest of tumor growth compared with nontargeted Nps and free DOCT. Thus, actively targeted CET MAb-DOCT-γ-PGA Nps could be developed as a substitute to conventional nonspecific chemotherapy, and hence could become a feasible strategy for cancer therapy for EGFR-overexpressing gastric tumors.

Earthquake Loading Assessment to Evaluate Liquefaction Potential in Emilia-Romagna Region

NASA Astrophysics Data System (ADS)

Daminelli, R.; Marcellini, A.; Tento, A.

2016-12-01

The May-June 2012 seismic sequence that struck Lombardia and Emilia-Romagna consisted of seven main events of magnitude greater than 5 followed by numerous aftershocks. The strongest earthquakes occurred on May 20 (M=5.9) and May 29 (M=5.8). The widespread soil liquefaction, unexpected because of the moderate magnitude of the events, pushed the local authorities to issue research projects aimed to define the earthquake loading to evaluate the liquefaction safety factor. The reasons explained below led us to adopt a deterministic hazard approach to evaluate the seismic parameters relevant to liquefaction assessment, despite the fact that the Italian Seismic Building Code (NTC08) is based on probabilistic hazard analysis. For urban planning and building design geologists generally adopt the CRR/CSR technique to assess liquefaction potential; therefore we considered PGA and a design magnitude to be representative of the seismic loading. The procedure adopted consists: a) identification of seismic source zones and characterization of each zone by the maximum magnitude; b) evaluation of the source to site distance and c) adoption of a suitable attenuation law to compute the expected PGA at the site, given the site condition and the design magnitude. The design magnitude can be: the maximum magnitude; the magnitude that causes the largest PGA, or both. The PGA values obtained are larger with respect to the 474 years return period PGA prescribed by NTC08 for the seismic design for ordinary buildings. We conducted a CPTU resistance test intended to define the CRR at the village of Cavezzo, situated in the epicentral area of the 2012 earthquake. The CRR/CSR ratio led to an elevated liquefaction risk at the analysed site. On the contrary the adoption of the 474 years return period PGA of the NTCO8 prescribed for Cavezzo site led to a negligible liquefaction risk. Note that very close to the investigated site several liquefaction phenomena were observed.

Earthquake Loading Assessment to Evaluate Liquefaction Potential in Emilia-Romagna Region

NASA Astrophysics Data System (ADS)

Daminelli, Rosastella; Marcellini, Alberto; Tento, Alberto

2017-04-01

The May-June 2012 seismic sequence that struck Lombardia and Emilia-Romagna consisted of seven main events of magnitude greater than 5 followed by numerous aftershocks. The strongest earthquakes occurred on May 20 (M=5.9) and May 29 (M=5.8). The widespread soil liquefaction, unexpected because of the moderate magnitude of the events, pushed the local authorities to issue research projects aimed to define the earthquake loading to evaluate the liquefaction safety factor. The reasons explained below led us to adopt a deterministic hazard approach to evaluate the seismic parameters relevant to liquefaction assessment, despite the fact that the Italian Seismic Building Code (NTC08) is based on probabilistic hazard analysis. For urban planning and building design geologists generally adopt the CRR/CSR technique to assess liquefaction potential; therefore we considered PGA and a design magnitude to be representative of the seismic loading. The procedure adopted consists: a) identification of seismic source zones and characterization of each zone by the maximum magnitude; b) evaluation of the source to site distance and c) adoption of a suitable attenuation law to compute the expected PGA at the site, given the site condition and the design magnitude. The design magnitude can be: the maximum magnitude; the magnitude that causes the largest PGA, or both. The PGA values obtained are larger with respect to the 474 years return period PGA prescribed by NTC08 for the seismic design for ordinary buildings. We conducted a CPTU resistance test intended to define the CRR at the village of Cavezzo, situated in the epicentral area of the 2012 earthquake. The CRR/CSR ratio led to an elevated liquefaction risk at the analysed site. On the contrary the adoption of the 474 years return period PGA of the NTCO8 prescribed for Cavezzo site led to a negligible liquefaction risk. Note that very close to the investigated site several liquefaction phenomena were observed.

The reliability of three psoriasis assessment tools: Psoriasis area and severity index, body surface area and physician global assessment.

PubMed

Bożek, Agnieszka; Reich, Adam

2017-08-01

A wide variety of psoriasis assessment tools have been proposed to evaluate the severity of psoriasis in clinical trials and daily practice. The most frequently used clinical instrument is the psoriasis area and severity index (PASI); however, none of the currently published severity scores used for psoriasis meets all the validation criteria required for an ideal score. The aim of this study was to compare and assess the reliability of 3 commonly used assessment instruments for psoriasis severity: the psoriasis area and severity index (PASI), body surface area (BSA) and physician global assessment (PGA). On the scoring day, 10 trained dermatologists evaluated 9 adult patients with plaque-type psoriasis using the PASI, BSA and PGA. All the subjects were assessed twice by each physician. Correlations between the assessments were analyzed using the Pearson correlation coefficient. Intra-class correlation coefficient (ICC) was calculated to analyze intra-rater reliability, and the coefficient of variation (CV) was used to assess inter-rater variability. Significant correlations were observed among the 3 scales in both assessments. In all 3 scales the ICCs were > 0.75, indicating high intra-rater reliability. The highest ICC was for the BSA (0.96) and the lowest one for the PGA (0.87). The CV for the PGA and PASI were 29.3 and 36.9, respectively, indicating moderate inter-rater variability. The CV for the BSA was 57.1, indicating high inter-rater variability. Comparing the PASI, PGA and BSA, it was shown that the PGA had the highest inter-rater reliability, whereas the BSA had the highest intra-rater reliability. The PASI showed intermediate values in terms of interand intra-rater reliability. None of the 3 assessment instruments showed a significant advantage over the other. A reliable assessment of psoriasis severity requires the use of several independent evaluations simultaneously.

Biomechanical testing of a polymer-based biomaterial for the restoration of spinal stability after nucleotomy

PubMed Central

Hegewald, Aldemar A; Knecht, Sven; Baumgartner, Daniel; Gerber, Hans; Endres, Michaela; Kaps, Christian; Stüssi, Edgar; Thomé, Claudius

2009-01-01

Background Surgery for disc herniations can be complicated by two major problems: painful degeneration of the spinal segment and re-herniation. Therefore, we examined an absorbable poly-glycolic acid (PGA) biomaterial, which was lyophilized with hyaluronic acid (HA), for its utility to (a) re-establish spinal stability and to (b) seal annulus fibrosus defects. The biomechanical properties range of motion (ROM), neutral zone (NZ) and a potential annulus sealing capacity were investigated. Methods Seven bovine, lumbar spinal units were tested in vitro for ROM and NZ in three consecutive stages: (a) intact, (b) following nucleotomy and (c) after insertion of a PGA/HA nucleus-implant. For biomechanical testing, spinal units were mounted on a loading-simulator for spines. In three cycles, axial loading was applied in an excentric mode with 0.5 Nm steps until an applied moment of ± 7.5 Nm was achieved in flexion/extension. ROM and NZ were assessed. These tests were performed without and with annulus sealing by sewing a PGA/HA annulus-implant into the annulus defect. Results Spinal stability was significantly impaired after nucleotomy (p < 0.001). Intradiscal implantation of a PGA-HA nucleus-implant, however, restored spinal stability (p < 0.003). There was no statistical difference between the stability provided by the nucleus-implant and the intact stage regarding flexion/extension movements (p = 0.209). During the testing sequences, herniation of biomaterial through the annulus defect into the spinal canal regularly occurred, resulting in compression of neural elements. Sewing a PGA/HA annulus-implant into the annulus defect, however, effectively prevented herniation. Conclusion PGA/HA biomaterial seems to be well suited for cell-free and cell-based regenerative treatment strategies in spinal surgery. Its abilities to restore spinal stability and potentially close annulus defects open up new vistas for regenerative approaches to treat intervertebral disc degeneration and for preventing implant herniation. PMID:19604373

Influence of angular acceleration-deceleration pulse shapes on regional brain strains.

PubMed

Yoganandan, Narayan; Li, Jianrong; Zhang, Jiangyue; Pintar, Frank A; Gennarelli, Thomas A

2008-07-19

Recognizing the association of angular loading with brain injuries and inconsistency in previous studies in the application of the biphasic loads to animal, physical, and experimental models, the present study examined the role of the acceleration-deceleration pulse shapes on region-specific strains. An experimentally validated two-dimensional finite element model representing the adult male human head was used. The model simulated the skull and falx as a linear elastic material, cerebrospinal fluid as a hydrodynamic material, and cerebrum as a linear viscoelastic material. The angular loading matrix consisted coronal plane rotation about a center of rotation that was acceleration-only (4.5 ms duration, 7.8 krad/s/s peak), deceleration-only (20 ms, 1.4 krad/s/s peak), acceleration-deceleration, and deceleration-acceleration pulses. Both biphasic pulses had peaks separated by intervals ranging from 0 to 25 ms. Principal strains were determined at the corpus callosum, base of the postcentral sulcus, and cerebral cortex of the parietal lobe. The cerebrum was divided into 17 regions and peak values of average maximum principal strains were determined. In all simulations, the corpus callosum responded with the highest strains. Strains were the least under all simulations in the lower parietal lobes. In all regions peak strains were the same for both monophase pulses suggesting that the angular velocity may be a better metric than peak acceleration or deceleration. In contrast, for the biphasic pulse, peak strains were region- and pulse-shape specific. Peak values were lower in both biphasic pulses when there was no time separation between the pulses than the corresponding monophase pulse. Increasing separation time intervals increased strains, albeit non-uniformly. Acceleration followed by deceleration pulse produced greater strains in all regions than the other form of biphasic pulse. Thus, pulse shape appears to have an effect on regional strains in the brain.

Complex source mechanisms of mining-induced seismic events - implications for surface effects

NASA Astrophysics Data System (ADS)

Orlecka-Sikora, B.; Cesca, S.; Lasocki, S.; Rudzinski, L.; Lizurek, L.; Wiejacz, P.; Urban, P.; kozlowska, M.

2012-04-01

The seismicity of Legnica-Głogów Copper District (LGCD) is induced by mining activities in three mines: Lubin, Rudna and Polkowice-Sieroszowice. Ground motion caused by strong tremors might affect local infrastructure. "Żelazny Most" tailings pond, the biggest structure of this type in Europe, is here under special concern. Due to surface objects protection, Rudna Mine has been running ground motion monitoring for several years. From June 2010 to June 2011 unusually strong and extensive surface impact has been observed for 6 mining tremors induced in one of Rudna mining sections. The observed peak ground acceleration (PGA) for both horizontal and vertical component were in or even beyond 99% confidence interval for prediction. The aim of this paper is analyze the reason of such unusual ground motion. On the basis of registrations from Rudna Mine mining seismological network and records from Polish Seismological Network held by the Institute of Geophysics Polish Academy of Sciences (IGF PAN), the source mechanisms of these 6 tremors were calculated using a time domain moment tensor inversion. Furthermore, a kinematic analysis of the seismic source was performed, in order to determine the rupture planes orientations and rupture directions. These results showed that in case of the investigated tremors, point source models and shear fault mechanisms, which are most often assumed in mining seismology, are invalid. All analyzed events indicate extended sources with non-shear mechanism. The rapture planes have small dip angles and the rupture starts at the tremors hypocenter and propagates in the direction opposite to the plane dip. The tensional component plays here also big role. These source mechanisms well explain such observed strong ground motion, and calculated synthetic PGA values well correlates with observed ones. The relationship between mining tremors were also under investigation. All subsequent tremors occurred in the area of increased stress due to stress transfer caused by previous tremors. This indicates that preceding tremors contributed to the occurrence of later ones in the area. This work was prepared partially within the framework of the research projects No. N N307234937 and 3935/B/T02/2010/39 financed by the Ministry of Education and Science of Poland during the period 2009 to 2011 and 2010 to 2012, respectively, and the project MINE, financed by the German Ministry of Education and Research (BMBF), R&D Programme Geotechnologien, Grant of project BMBF03G0737.

Lower Arm Muscle Activation during Indirect-Localized Vibration: The Influence of Skill Levels When Applying Different Acceleration Loads.

PubMed

Padulo, Johnny; Di Giminiani, Riccardo; Dello Iacono, Antonio; Zagatto, Alessandro M; Migliaccio, Gian M; Grgantov, Zoran; Ardigò, Luca P

2016-01-01

We investigated the electromyographic response to synchronous indirect-localized vibration interventions in international and national table tennis players. Twenty-six male table tennis players, in a standing position, underwent firstly an upper arms maximal voluntary contraction and thereafter two different 30-s vibration interventions in random order: high acceleration load (peak acceleration = 12.8 g, frequency = 40 Hz; peak-to-peak displacement = 4.0 mm), and low acceleration load (peak acceleration = 7.2 g, frequency = 30 Hz, peak-to-peak displacement = 4.0 mm). Surface electromyography root mean square from brachioradialis, extensor digitorum, flexor carpi radialis, and flexor digitorum superficialis recorded during the two vibration interventions was normalized to the maximal voluntary contraction recording. Normalized surface electromyography root mean square was higher in international table tennis players with respect to national ones in all the interactions between muscles and vibration conditions (P < 0.05), with the exception of flexor carpi radialis (at low acceleration load, P > 0.05). The difference in normalized surface electromyography root mean square between international table tennis players and national ones increased in all the muscles with high acceleration load (P < 0.05), with the exception of flexor digitorum superficialis (P > 0.05). The muscle activation during indirect-localized vibration seems to be both skill level and muscle dependent. These results can optimize the training intervention in table tennis players when applying indirect-localized vibration to lower arm muscles. Future investigations should discriminate between middle- and long-term adaptations in response to specific vibration loads.

Lower Arm Muscle Activation during Indirect-Localized Vibration: The Influence of Skill Levels When Applying Different Acceleration Loads

PubMed Central

Padulo, Johnny; Di Giminiani, Riccardo; Dello Iacono, Antonio; Zagatto, Alessandro M.; Migliaccio, Gian M.; Grgantov, Zoran; Ardigò, Luca P.

2016-01-01

We investigated the electromyographic response to synchronous indirect-localized vibration interventions in international and national table tennis players. Twenty-six male table tennis players, in a standing position, underwent firstly an upper arms maximal voluntary contraction and thereafter two different 30-s vibration interventions in random order: high acceleration load (peak acceleration = 12.8 g, frequency = 40 Hz; peak-to-peak displacement = 4.0 mm), and low acceleration load (peak acceleration = 7.2 g, frequency = 30 Hz, peak-to-peak displacement = 4.0 mm). Surface electromyography root mean square from brachioradialis, extensor digitorum, flexor carpi radialis, and flexor digitorum superficialis recorded during the two vibration interventions was normalized to the maximal voluntary contraction recording. Normalized surface electromyography root mean square was higher in international table tennis players with respect to national ones in all the interactions between muscles and vibration conditions (P < 0.05), with the exception of flexor carpi radialis (at low acceleration load, P > 0.05). The difference in normalized surface electromyography root mean square between international table tennis players and national ones increased in all the muscles with high acceleration load (P < 0.05), with the exception of flexor digitorum superficialis (P > 0.05). The muscle activation during indirect-localized vibration seems to be both skill level and muscle dependent. These results can optimize the training intervention in table tennis players when applying indirect-localized vibration to lower arm muscles. Future investigations should discriminate between middle- and long-term adaptations in response to specific vibration loads. PMID:27378948

Moment Magnitudes and Local Magnitudes for Small Earthquakes: Implications for Ground-Motion Prediction and b-values

NASA Astrophysics Data System (ADS)

Baltay, A.; Hanks, T. C.; Vernon, F.

2016-12-01

We illustrate two essential consequences of the systematic difference between moment magnitude and local magnitude for small earthquakes, illuminating the underlying earthquake physics. Moment magnitude, M 2/3 log M0, is uniformly valid for all earthquake sizes [Hanks and Kanamori, 1979]. However, the relationship between local magnitude ML and moment is itself magnitude dependent. For moderate events, 3< M < 7, M and M­L are coincident; for earthquakes smaller than M3, ML log M0 [Hanks and Boore, 1984]. This is a consequence of the saturation of the apparent corner frequency fc as it becoming greater than the largest observable frequency, fmax; In this regime, stress drop no longer controls ground motion. This implies that ML and M differ by a factor of 1.5 for these small events. While this idea is not new, its implications are important as more small-magnitude data are incorporated into earthquake hazard research. With a large dataset of M<3 earthquakes recorded on the ANZA network, we demonstrate striking consequences of the difference between M and ML. ML scales as the log peak ground motions (e.g., PGA or PGV) for these small earthquakes, which yields log PGA log M0 [Boore, 1986]. We plot nearly 15,000 records of PGA and PGV at close stations, adjusted for site conditions and for geometrical spreading to 10 km. The slope of the log of ground motion is 1.0*ML­, or 1.5*M, confirming the relationship, and that fc >> fmax. Just as importantly, if this relation is overlooked, prediction of large-magnitude ground motion from small earthquakes will be misguided. We also consider the effect of this magnitude scale difference on b-value. The oft-cited b-value of 1 should hold for small magnitudes, given M. Use of ML necessitates b=2/3 for the same data set; use of mixed, or unknown, magnitudes complicates the matter further. This is of particular import when estimating the rate of large earthquakes when one has limited data on their recurrence, as is the case for induced earthquakes in the central US.

Dynamic Parameters of the 2015 Nepal Gorkha Mw7.8 Earthquake Constrained by Multi-observations

NASA Astrophysics Data System (ADS)

Weng, H.; Yang, H.

2017-12-01

Dynamic rupture model can provide much detailed insights into rupture physics that is capable of assessing future seismic risk. Many studies have attempted to constrain the slip-weakening distance, an important parameter controlling friction behavior of rock, for several earthquakes based on dynamic models, kinematic models, and direct estimations from near-field ground motion. However, large uncertainties of the values of the slip-weakening distance still remain, mostly because of the intrinsic trade-offs between the slip-weakening distance and fault strength. Here we use a spontaneously dynamic rupture model to constrain the frictional parameters of the 25 April 2015 Mw7.8 Nepal earthquake, by combining with multiple seismic observations such as high-rate cGPS data, strong motion data, and kinematic source models. With numerous tests we find the trade-off patterns of final slip, rupture speed, static GPS ground displacements, and dynamic ground waveforms are quite different. Combining all the seismic constraints we can conclude a robust solution without a substantial trade-off of average slip-weakening distance, 0.6 m, in contrast to previous kinematical estimation of 5 m. To our best knowledge, this is the first time to robustly determine the slip-weakening distance on seismogenic fault from seismic observations. The well-constrained frictional parameters may be used for future dynamic models to assess seismic hazard, such as estimating the peak ground acceleration (PGA) etc. Similar approach could also be conducted for other great earthquakes, enabling broad estimations of the dynamic parameters in global perspectives that can better reveal the intrinsic physics of earthquakes.

Estimation of ground motion parameters

USGS Publications Warehouse

Boore, David M.; Joyner, W.B.; Oliver, A.A.; Page, R.A.

1978-01-01

Strong motion data from western North America for earthquakes of magnitude greater than 5 are examined to provide the basis for estimating peak acceleration, velocity, displacement, and duration as a function of distance for three magnitude classes. A subset of the data (from the San Fernando earthquake) is used to assess the effects of structural size and of geologic site conditions on peak motions recorded at the base of structures. Small but statistically significant differences are observed in peak values of horizontal acceleration, velocity and displacement recorded on soil at the base of small structures compared with values recorded at the base of large structures. The peak acceleration tends to b3e less and the peak velocity and displacement tend to be greater on the average at the base of large structures than at the base of small structures. In the distance range used in the regression analysis (15-100 km) the values of peak horizontal acceleration recorded at soil sites in the San Fernando earthquake are not significantly different from the values recorded at rock sites, but values of peak horizontal velocity and displacement are significantly greater at soil sites than at rock sites. Some consideration is given to the prediction of ground motions at close distances where there are insufficient recorded data points. As might be expected from the lack of data, published relations for predicting peak horizontal acceleration give widely divergent estimates at close distances (three well known relations predict accelerations between 0.33 g to slightly over 1 g at a distance of 5 km from a magnitude 6.5 earthquake). After considering the physics of the faulting process, the few available data close to faults, and the modifying effects of surface topography, at the present time it would be difficult to accept estimates less than about 0.8 g, 110 cm/s, and 40 cm, respectively, for the mean values of peak acceleration, velocity, and displacement at rock sites within 5 km of fault rupture in a magnitude 6.5 earthquake. These estimates can be expected to change as more data become available.

Single-stage cartilage repair in the knee with microfracture covered with a resorbable polymer-based matrix and autologous bone marrow concentrate.

PubMed

Enea, D; Cecconi, S; Calcagno, S; Busilacchi, A; Manzotti, S; Kaps, C; Gigante, A

2013-12-01

Different single-stage surgical approaches are currently under evaluation to repair focal cartilage lesions. This study aims to analyze the clinical and histological results after treatment of focal condylar articular lesions of the knee with microfracture and subsequent covering with a resorbable polyglycolic acid/hyaluronan (PGA -HA) matrix augmented with autologous bone marrow concentrate (BMC). Nine patients with focal lesions of the condylar articular cartilage were consecutively treated with arthroscopic PGA -HA-covered microfracture and bone marrow concentrate (PGA -HA-CMBMC). Patients were retrospectively assessed using standardized assessment tools and magnetic resonance imaging (MRI). Five patients consented to undergo second look arthroscopy and 2 consented biopsy harvest. All the patients but one showed improvement in clinical scoring from the pre-operative situation to the latest follow-up (average 22±2months). The mean IKDC subjective score, Lysholm score, VAS and the median Tegner score significantly increased from baseline to the latest follow-up. Cartilage macroscopic assessment at 12months revealed that one repair appeared normal, three almost normal and one appeared abnormal. Histological analysis proofed hyaline-like cartilage repair tissue formation in one case. MRI at 8 to 12months follow-up showed complete defect filling. The first clinical experience with single-stage treatment of focal cartilage defects of the knee with microfracture and covering with the PGA -HA matrix augmented with autologous BMC (PGA -HA-CMBMC) suggests that it is safe, it improves knee function and has the potential to regenerate hyaline-like cartilage. IV, case series. Copyright © 2013 Elsevier B.V. All rights reserved.

Eu3+ functionalized Sc-MOFs: Turn-on fluorescent switch for ppb-level biomarker of plastic pollutant polystyrene in serum and urine and on-site detection by smartphone.

PubMed

Lian, Xiao; Miao, Tifang; Xu, Xiaoyu; Zhang, Chi; Yan, Bing

2017-11-15

The harm of plastic pollutants for human and environment is being paid more and more attention. Polystyrene (PS) and styrene are toxic compounds used in large quantities in the production of fiberglass reinforced polyesters. In this work, a simple method was designed for independent detecting polystyrene and styrene biomarker (phenylglyoxylic acid, PGA) in serum and urine. We prepared Eu3+ functionalized Sc-based metal-organic frameworks as turn-on fluorescent switch for PGA. The distinct enhanced luminescence is observed from the Eu@MOFs with addition of PGA. The fabricated fluorescent switch has several appealing features including high sensitivity (LOD = 4.16 ppb), quick response time (less than 5s) and broad linear range (0.02mg/mL to 0.5mg/mL). Furthermore, Eu@MOFs exhibits excellent selectivity that it is not affected by congeneric biomarkers. More interestingly, a paper-based probe has been devised. The paper-based fluorescence probe would perform an obvious fluorescence change from navy to red with the variety of PGA content. The practicability of the on-site detection platform for quantitative analysis using a colour scanning APP in smartphone has been also demonstrated by coupled with our proposed paper based fluorescence probe. This work first provides a fast, accurate and sensitive method for independent monitoring PS biomarker PGA, and the paper-based probe exhibit a new idea for design portable and easy to operate sensing devices combine with smartphone. Copyright © 2017 Elsevier B.V. All rights reserved.

Partial Gland Ablation for Prostate Cancer: Report of a Food and Drug Administration, American Urological Association, and Society of Urologic Oncology Public Workshop.

PubMed

Jarow, Jonathan P; Ahmed, Hashim U; Choyke, Peter L; Taneja, Samir S; Scardino, Peter T

2016-02-01

To summarize the discussion that took place at a public workshop, co-sponsored by the U.S. Food and Drug Administration, the American Urological Association, and Society of Urologic Oncology reviewing the current state of the art for partial gland ablation (PGA) for the management of patients with prostate cancer. The purpose of this workshop was to discuss potential indications, current available evidence, and designs for future trials to provide the evidence needed by patients and providers to decide how and when to use PGA. A workshop evaluating PGA for prostate cancer was held in New Orleans, Louisiana, in May 2015. Invited experts representing all stakeholders and attendees discussed the regulatory development of medical products, technology available, potential indications, and designs of trials to evaluate this modality of therapy. The panel presented the current information on the technologies available to perform PGA, the potential indications, and results of prior consensus conferences. Use of magnetic resonance imaging for patient selection, guide therapy, and follow-up was discussed. Designs of trials to assess PGA outcomes were discussed. The general consensus was that currently available technologies are capable of selective ablation with reasonable accuracy, but that criteria for patient selection remain debatable, and long-term cancer control remains to be established in properly designed and well-performed prospective clinical trials. Concerns include the potential for excessive, unnecessary use in patients with low-risk cancer and, conversely, that current diagnostic techniques may underestimate the extent and aggressiveness of some cancers, leading to inadequate treatment. Published by Elsevier Inc.

L-pyroglutamic acid inhibits energy production and lipid synthesis in cerebral cortex of young rats in vitro.

PubMed

Silva, A R; Silva, C G; Ruschel, C; Helegda, C; Wyse, A T; Wannmacher, C M; Wajner, M; Dutra-Filho, C S

2001-12-01

In the present study we investigated the effects of L-pyroglutamic acid (PGA), which predominantly accumulates in the inherited metabolic diseases glutathione synthetase deficiency (GSD) and gamma-glutamylcysteine synthetase deficiency (GCSD), on some in vitro parameters of energy metabolism and lipid biosynthesis. We evaluated the rates of CO2 production and lipid synthesis from [U-14C]acetate, as well as ATP levels and the activities of creatine kinase and of the respiratory chain complexes I-IV in cerebral cortex of young rats in the presence of PGA at final concentrations ranging from 0.5 to 3 mM. PGA significantly reduced brain CO2 production by 50% at the concentrations of 0.5 to 3 mM, lipid biosynthesis by 20% at concentrations of 0.5 to 3 mM and ATP levels by 52% at the concentration of 3 mM. Regarding the enzyme activities, PGA significantly decreased NADH:cytochrome c oxireductase (complex I plus CoQ plus complex III) by 40% at concentrations of 0.5-3.0 mM and cytochrome c oxidase activity by 22-30% at the concentration of 3.0 mM, without affecting the activities of succinate dehydrogenase, succinate:DCPIP oxireductase (complex II), succinate:cytochrome c oxireductase (complex II plus CoQ plus complex III) or creatine kinase. The results strongly indicate that PGA impairs brain energy production. If these effects also occur in humans, it is possible that they may contribute to the neuropathology of patients affected by these diseases.

Efficacy and Safety of Switching Prostaglandin Analog Monotherapy to Tafluprost/Timolol Fixed-Combination Therapy

PubMed Central

Kitamura, Kazuyoshi; Chiba, Tatsuya; Mabuchi, Fumihiko; Ishijima, Kiyotaka; Omoto, Shu; Kashiwagi, Fumiko; Godo, Takashi; Kogure, Satoshi; Goto, Teruhiko; Shibuya, Takashi; Tanabe, Jhoji; Tsukahara, Shigeo; Tsuchiya, Tadaharu; Tokunaga, Takaharu; Hosaka, Osamu; Saito, Tetsunori

2018-01-01

Purpose To assess the efficacy and safety of switching from prostaglandin analog (PGA) monotherapy to tafluprost/timolol fixed-combination (Taf/Tim) therapy. Subjects and Methods Patients with primary open-angle glaucoma, normal-tension glaucoma, or ocular hypertension who had received PGA monotherapy for at least 3 months were enrolled. Patients were examined at 1, 2, and 3 months after changing therapies. Subsequently, the patients were returned to PGA monotherapy. The examined parameters included intraocular pressure (IOP) and adverse events. A questionnaire survey was conducted after the switch to Taf/Tim therapy. Results Forty patients with a mean age of 66.5 ± 10.3 years were enrolled; 39 of these patients completed the study protocol. Switching to Taf/Tim significantly reduced the IOP from 18.2 ± 2.6 mmHg at baseline to 14.8 ± 2.5 mmHg at 1 month, 15.2 ± 2.8 mmHg at 2 months, and 14.9 ± 2.5 mmHg at 3 months (P < 0.001). Switching back to the original PGA monotherapy returned the IOP values to baseline levels. Taf/Tim reduced the pulse rate insignificantly. No significant differences were observed in blood pressure, conjunctival hyperemia, or corneal adverse events. A questionnaire showed that the introduction of Taf/Tim did not significantly influence symptoms. Conclusions Compared with PGA monotherapy, Taf/Tim fixed-combination therapy significantly reduced IOP without severe adverse events. PMID:29675274

Effects of dimethyl prostaglandin A1 on herpes simplex virus and human immunodeficiency virus replication

NASA Technical Reports Server (NTRS)

Hughes-Fulford, M.; McGrath, M. S.; Hanks, D.; Erickson, S.; Pulliam, L.

1992-01-01

We have investigated the direct effect of dimethyl prostaglandin A1 (dmPGA1) on the replication of herpes simplex virus (HSV) and human immunodeficiency virus type 1 (HIV-1). dmPGA1 significantly inhibited viral replication in both HSV and HIV infection systems at concentrations of dmPGA1 that did not adversely alter cellular DNA synthesis. The 50% inhibitory concentration (ID50) for several HSV type 1 (HSV-1) strains ranged from 3.8 to 5.6 micrograms/ml for Vero cells and from 4.6 to 7.3 micrograms/ml for human foreskin fibroblasts. The ID50s for two HSV-2 strains varied from 3.8 to 4.5 micrograms/ml for Vero cells; the ID50 was 5.7 micrograms/ml for human foreskin fibroblasts. We found that closely related prostaglandins did not have the same effect on the replication of HSV; dmPGE2 and dmPGA2 caused up to a 60% increase in HSV replication compared with that in untreated virus-infected cells. HIV-1 replication in acutely infected T cells (VB line) and chronically infected macrophages was assessed by quantitative decreases in p24 concentration. The effective ID50s were 2.5 micrograms/ml for VB cells acutely infected with HIV-1 and 5.2 micrograms/m for chronically infected macrophages. dmPGA1 has an unusual broad-spectrum antiviral activity against both HSV and HIV-1 in vitro and offers a new class of potential therapeutic agents for in vivo use.

Hoof accelerations and ground reaction forces of Thoroughbred racehorses measured on dirt, synthetic, and turf track surfaces.

PubMed

Setterbo, Jacob J; Garcia, Tanya C; Campbell, Ian P; Reese, Jennifer L; Morgan, Jessica M; Kim, Sun Y; Hubbard, Mont; Stover, Susan M

2009-10-01

To compare hoof acceleration and ground reaction force (GRF) data among dirt, synthetic, and turf surfaces in Thoroughbred racehorses. 3 healthy Thoroughbred racehorses. Forelimb hoof accelerations and GRFs were measured with an accelerometer and a dynamometric horseshoe during trot and canter on dirt, synthetic, and turf track surfaces at a racecourse. Maxima, minima, temporal components, and a measure of vibration were extracted from the data. Acceleration and GRF variables were compared statistically among surfaces. The synthetic surface often had the lowest peak accelerations, mean vibration, and peak GRFs. Peak acceleration during hoof landing was significantly smaller for the synthetic surface (mean + or - SE, 28.5g + or - 2.9g) than for the turf surface (42.9g + or - 3.8g). Hoof vibrations during hoof landing for the synthetic surface were < 70% of those for the dirt and turf surfaces. Peak GRF for the synthetic surface (11.5 + or - 0.4 N/kg) was 83% and 71% of those for the dirt (13.8 + or - 0.3 N/kg) and turf surfaces (16.1 + or - 0.7 N/kg), respectively. The relatively low hoof accelerations, vibrations, and peak GRFs associated with the synthetic surface evaluated in the present study indicated that synthetic surfaces have potential for injury reduction in Thoroughbred racehorses. However, because of the unique material properties and different nature of individual dirt, synthetic, and turf racetrack surfaces, extending the results of this study to encompass all track surfaces should be done with caution.

Calcium regulates glutamate dehydrogenase and poly-γ-glutamic acid synthesis in Bacillus natto.

PubMed

Meng, Yonghong; Dong, Guiru; Zhang, Chen; Ren, Yuanyuan; Qu, Yuling; Chen, Weifeng

2016-04-01

To study the effect of Ca(2+) on glutamate dehydrogenase (GDH) and its role in poly-γ-glutamic acid (γ-PGA) synthesis in Bacillus natto HSF 1410. When the concentration of Ca(2+) varied from 0 to 0.1 g/l in the growth medium of B. natto HSF 1410, γ-PGA production increased from 6.8 to 9.7 g/l, while GDH specific activity and NH4Cl consumption improved from 183 to 295 U/mg and from 0.65 to 0.77 g/l, respectively. GDH with α-ketoglutarate as substrate primarily used NADPH as coenzyme with a K m of 0.08 mM. GDH was responsible for the synthesis of endogenous glutamate. The specific activity of GDH remained essentially unchanged in the presence of CaCl2 (0.05-0.2 g/l) in vitro. However, the specific activity of GDH and its expression was significantly increased by CaCl2 in vivo. Therefore, the regulation of GDH and PGA synthesis by Ca(2+) is an intracellular process. Calcium regulation may be an effective approach for producing γ-PGA on an industrial scale.

A new, simple, green, and one-pot four-component synthesis of bare and poly(α,γ, L-glutamic acid)-capped silver nanoparticles

PubMed Central

Savanović, Igor; Uskoković, Vuk; Škapin, Srečo D.; Bračko, Ines; Jovanović, Uroš; Uskoković, Dragan

2013-01-01

A simple and green chemical method has been developed to synthesize stable bare and capped silver nanoparticles based on the reduction of silver ions by glucose and capping by poly(α,γ,L-glutamic acid) (PGA). The use of ammonia during synthesis was avoided. PGA has had a dual role in the synthesis and was used as a capping agent to make the silver nanoparticle more biocompatible and to protect the nanoparticles from agglomerating in the liquid medium. The synthesized PGA-capped silver nanoparticles in the size range 5–45 nm were stable over long periods of time, without signs of precipitation. Morphological examination has shown that the silver nanoparticles had a nearly spherical, multiply twinned structure. The effects of the reaction temperature and the reaction time during the synthesis were investigated too. The biocompatibility of the PGA-capped silver nano-particles is discussed in terms of in vitro toxicity with human intestinal Caco-2 cells. The samples were characterized by UV–Visible spectroscopy, field emission scanning electron microscopy, transmission electron microscopy, and zeta potential measurements. PMID:24062597

A digitally controlled AGC loop circuitry for GNSS receiver chip with a binary weighted accurate dB-linear PGA

NASA Astrophysics Data System (ADS)

Gang, Jin; Yiqi, Zhuang; Yue, Yin; Miao, Cui

2015-03-01

A novel digitally controlled automatic gain control (AGC) loop circuitry for the global navigation satellite system (GNSS) receiver chip is presented. The entire AGC loop contains a programmable gain amplifier (PGA), an AGC circuit and an analog-to-digital converter (ADC), which is implemented in a 0.18 μm complementary metal-oxide-semiconductor (CMOS) process and measured. A binary-weighted approach is proposed in the PGA to achieve wide dB-linear gain control with small gain error. With binary-weighted cascaded amplifiers for coarse gain control, and parallel binary-weighted trans-conductance amplifier array for fine gain control, the PGA can provide a 64 dB dynamic range from -4 to 60 dB in 1.14 dB gain steps with a less than 0.15 dB gain error. Based on the Gaussian noise statistic characteristic of the GNSS signal, a digital AGC circuit is also proposed with low area and fast settling. The feed-backward AGC loop occupies an area of 0.27 mm2 and settles within less than 165 μs while consuming an average current of 1.92 mA at 1.8 V.

A polygalacturonase localized in the Golgi apparatus in Pisum sativum.

PubMed

Ohashi, Takao; Jinno, Jun; Inoue, Yoshiyuki; Ito, Shoko; Fujiyama, Kazuhito; Ishimizu, Takeshi

2017-09-01

Pectin is a plant cell wall constituent that is mainly composed of polygalacturonic acid (PGA), a linear α1,4-d-galacturonic acid (GalUA) backbone. Polygalacturonase (PG) hydrolyzes the α1,4-linkages in PGA. Nearly all plant PGs identified thus far are secreted as soluble proteins. Here we describe the microsomal PG activity in pea (Pisum sativum) epicotyls and present biochemical evidence that it was localized to the Golgi apparatus, where pectins are biosynthesized. The microsomal PG was purified, and it was enzymatically characterized. The purified enzyme showed maximum activity towards pyridylaminated oligogalacturonic acids with six degrees of polymerization (PA-GalUA6), with a Km value of 11 μM for PA-GalUA6. The substrate preference of the enzyme was complementary to that of PGA synthase. The main PG activity in microsomes was detected in the Golgi fraction by sucrose density gradient ultracentrifugation. The activity of the microsomal PG was lower in rapidly growing epicotyls, in contrast to the high expression of PGA synthase. The role of this PG in the regulation of pectin biosynthesis or plant growth is discussed. © The Authors 2017. Published by Oxford University Press on behalf of the Japanese Biochemical Society. All rights reserved.

A High Peak Current Source for the CEBAF Injector

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yunn, Byung; Sinclair, Charles; Krafft, Geoffrey

1992-07-01

The CEBAF accelerator can drive high power IR and UV FELs, if a high peak current source is added to the existing front end. We present a design for a high peak current injector which is compatible with simultaneous operation of the accelerator for cw nulear physics (NP) beam. The high peak current injector provides 60 A peak current in 2 psec long bunches carrying 120 pC charge at 7.485 MHz. At 10 MeV that beam is combined with 5 MeV NP beam (0.13pC, 2 psec long bunches at 1497 MHz) in an energy combination chicane for simultaneous acceleration inmore » the injector linac. The modifications to the low-energy NP transport are described. Results of optical and beam dynamics calculations for both high peak current and NP beams in combined operation are presented.« less

Efficacy of Guselkumab Compared With Adalimumab and Placebo for Psoriasis in Specific Body Regions: A Secondary Analysis of 2 Randomized Clinical Trials.

PubMed

Foley, Peter; Gordon, Kenneth; Griffiths, Christopher E M; Wasfi, Yasmine; Randazzo, Bruce; Song, Michael; Li, Shu; Shen, Yaung-Kaung; Blauvelt, Andrew

2018-06-01

Psoriasis of the scalp, palms and/or soles, and nails is challenging to treat. To evaluate the effect of guselkumab on psoriasis in specific body regions. VOYAGE 1 and VOYAGE 2 were, double-blind, placebo- and adalimumab-controlled studies of guselkumab conducted at 101 and 115 global sites, respectively, from November 3, 2014, to May 19, 2016. Patients had moderate to severe plaque psoriasis (Psoriasis Area and Severity Index score ≥12, Investigator's Global Assessment [IGA] score ≥3, and ≥10% body surface area with psoriasis). This post hoc data analysis was performed from February 10 through November 15, 2017. Patients were randomized to guselkumab, 100 mg (weeks 0 and 4, then every 8 weeks); placebo followed by guselkumab, 100 mg, starting at week 16; or adalimumab (80 mg [week 0] and 40 mg [week 1, then every 2 weeks]). Efficacy was assessed through week 24. End points included numbers of patients achieving scores of 0 or 1 (clear or near clear) or 0 (clear) on the scalp-specific IGA (ss-IGA), Physician's Global Assessment of the hands and/or feet (hf-PGA), and fingernail PGA (f-PGA) and percentage of improvement in target Nail Psoriasis Severity Index score. Of 1829 randomized patients (mean [SD] age, 43.6 [12.4] years; 1300 [71.1%] male, 1498 [81.9%] white), 1576 (86.2%) had psoriasis of the scalp; 501 (27.4%), palms and/or soles; and 1049 (57.4%), fingernails. At baseline, 1512 (82.7%), 461 (25.2%), and 928 (50.7%) patients had a score of 2 or higher on the ss-IGA, hf-PGA, and f-PGA, respectively, and were included in the analysis. Guselkumab was superior to placebo based on the proportion of patients achieving an ss-IGA score of 0 or 1 (560 [81.8%] vs 43 [12.4%]) at week 16 and to adalimumab (582 [85.0%] vs 329 [68.5%]) at week 24 (both P < .001); 479 (69.9%) in the guselkumab group vs 270 (56.3%) in the adalimumab group achieved an ss-IGA score of 0 (all P < .001). An hf-PGA score of 0 or 1 was achieved by 154 patients (75.5%) in the guselkumab group vs 15 (14.2%) in the placebo group at week 16 and 164 (80.4%) in the guselkumab group vs 91 (60.3%) in the adalimumab group at week 24; 153 (75.0%) in the guselkumab group vs 76 (50.3%) in the adalimumab group achieved an hf-PGA score of 0 (all P < .001). An f-PGA score of 0 or 1 was achieved by 196 patients (46.7%) in the guselkumab group vs 32 (15.2%) in the placebo group at week 16 (P < .001) and 252 (60.0%) in the guselkumab group vs 191 (64.3%) in the adalimumab group at week 24 (P = .11); 115 (27.4%) in the guselkumab group vs 83 (27.9%) in the adalimumab group achieved an f-PGA score of 0 (P = .63). Compared with adalimumab, guselkumab was associated with significant improvement in psoriasis on the scalp and palms and/or soles; magnitude of improvement in fingernails did not differ between treatments. These results may help dermatologists make treatment decisions for patients with psoriasis in difficult-to-treat body regions. ClinicalTrials.gov Identifiers: NCT02207231 and NCT02207244.

Rupture process and strong ground motions of the 2007 Niigataken Chuetsu-Oki earthquake -Directivity pulses striking the Kashiwazaki-Kariwa Nuclear Power Plant-

NASA Astrophysics Data System (ADS)

Irikura, K.; Kagawa, T.; Miyakoshi, K.; Kurahashi, S.

2007-12-01

The Niigataken Chuetsu-Oki earthquake occurred on July 16, 2007, northwest-off Kashiwazaki in Niigata Prefecture, Japan, causing severe damages of ten people dead, about 1300 injured, about 1000 collapsed houses and major lifelines suspended. In particular, strong ground motions from the earthquake struck the Kashiwazaki-Kariwa nuclear power plant (hereafter KKNPP), triggering a fire at an electric transformer and other problems such as leakage of water containing radioactive materials into air and the sea, although the radioactivity levels of the releases are as low as those of the radiation which normal citizens would receive from the natural environment in a year. The source mechanism of this earthquake is a reverse fault, but whether it is the NE-SW strike and NW dip or the SW-NE strike and SE dip are still controversial from the aftershock distribution and geological surveys near the source. Results of the rupture processes inverted by using the GPS and SAR data, tsunami data and teleseismic data so far did not succeed in determining which fault planes moved. Strong ground motions were recorded at about 390 stations by the K-NET of NIED including the stations very close to the source area. There was the KKNPP which is probably one of buildings and facilities closest to the source area. They have their own strong motion network with 22 three-components' accelerographs locating at ground-surface, underground, buildings and basements of reactors. The PGA attenuation-distance relationships made setting the fault plane estimated from the GPS data generally follow the empirical relations in Japan, for example, Fukushima and Tanaka (1990) and Si and Midorikawa (1999), even if either fault plane, SE dip or NW dip, is assumed. However, the strong ground motions in the site of the KKNPP had very large accelerations and velocities more than those expected from the empirical relations. The surface motions there had the PGA of more than 1200 gals and even underground motions at the basements of the reactors locating five stories below the ground had the PGA of 680 gals. We simulated ground motions using the characterized source model (Kamae and Irikura, 1998) with three asperities and the empirical Green's function method (Irikura, 1986). Then, we found that the source model should be a reverse fault with the NE-SW strike and NW dip to explain the strong motion records obtained near the source area. In particular, strong ground motions in the site of the KKNPP had three significant pulses which are generated as directivity pulses in forward direction of rupture propagation. This is the reason why the strong ground motions in the site of the KKNPP had very large accelerations and velocities. The source model is also verified comparing the observed records at the KKNPP with the numerical simulations by the discrete wavenumber method (Bouchon, 1981).

Continuous dosing versus interrupted therapy with ixekizumab: an integrated analysis of two phase 3 trials in psoriasis.

PubMed

Blauvelt, A; Papp, K A; Sofen, H; Augustin, M; Yosipovitch, G; Katoh, N; Mrowietz, U; Ohtsuki, M; Poulin, Y; Shrom, D; Burge, R; See, K; Mallbris, L; Gordon, K B

2017-06-01

Continuous treatment is recommended for patients with moderate-to-severe psoriasis; however, treatment may need to be interrupted in routine clinical practice. To assess outcomes in patients continuously treated with ixekizumab versus those who interrupted therapy and were subsequently retreated with ixekizumab (IXE). This analysis used data pooled from two phase 3 trials, UNCOVER-1 and UNCOVER-2. Patients were randomized to placebo (PBO), IXE every 4 (Q4W) or IXE every 2 weeks (Q2W) for 12 weeks. Patients with a static Physician's Global Assessment (sPGA) 0, 1 at Week 12 were rerandomized to IXEQ4W, IXE every 12 weeks (not presented) or PBO. We examined outcomes in patients who were continuously treated (IXEQ2W/IXEQ4W; IXEQ4W/IXEQ4W) or withdrawn (IXEQ2W/PBO; IXEQ4W/PBO), and in patients who were withdrawn and retreated with IXEQ4W for 24 weeks after disease relapse (sPGA ≥3). A total of 1226 treated patients achieved an sPGA 0, 1 at Week 12 and entered the maintenance phase; of these patients, 402 and 416 were rerandomized to PBO and IXEQ4W, respectively. Among patients interrupting treatment, 157 (82.2%) of IXEQ4W/PBO and 176 (83.4%) of IXEQ2W/PBO had an sPGA ≥3 by Week 60; median time to relapse was approximately 20 weeks irrespective of induction dose. At Week 60, continuously treated patients maintained high levels of PASI and sPGA responses (90.0% PASI 75 IXEQ2W/IXEQ4W; 81.9% sPGA 0, 1 IXEQ2W/IXEQ4W, non-responder imputation). After 24 weeks of retreatment with IXEQ4W (IXEQ2W/PBO/IXEQ4W and IXEQ4W/PBO/IXEQ4W), 87.0% (107 of 123) and 95.1% (97 of 102) (observed), respectively, of patients recaptured PASI 75 and 70.7% (104 of 147) and 82.3% (107 of 130) (observed) recaptured an sPGA 0, 1. Overall, adverse events in continuously treated and retreated patients were comparable. High levels of response were sustained with continuous ixekizumab treatment through 60 weeks. Most patients who were withdrawn experienced disease relapse, and most of those patients recaptured response after 24 weeks of retreatment. © 2017 The Authors. Journal of the European Academy of Dermatology and Venereology published by John Wiley & Sons Ltd on behalf of European Academy of Dermatology and Venereology.

Ebola Vaccination Using a DNA Vaccine Coated on PLGA-PLL/γPGA Nanoparticles Administered Using a Microneedle Patch.

PubMed

Yang, Hung-Wei; Ye, Ling; Guo, Xin Dong; Yang, Chinglai; Compans, Richard W; Prausnitz, Mark R

2017-01-01

Ebola DNA vaccine is incorporated into PLGA-PLL/γPGA nanoparticles and administered to skin using a microneedle (MN) patch. The nanoparticle delivery system increases vaccine thermostability and immunogenicity compared to free vaccine. Vaccination by MN patch produces stronger immune responses than intramuscular administration. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Patient-physician discordance in global assessment in early spondyloarthritis and its change over time: the DESIR cohort.

PubMed

Desthieux, Carole; Molto, Anna; Granger, Benjamin; Saraux, Alain; Fautrel, Bruno; Gossec, Laure

2016-09-01

To assess patient-physician discordance in global assessment of disease activity in early axial spondyloarthritis (axSpA) over time and determinants of discordance. DESIR (Devenir des Spondyloarthropathies Indifférenciées Récentes) is a French, multicentre, longitudinal cohort of patients with early inflammatory back pain suggestive of axSpA. Patient global assessment (PGA) and physician global assessment (PhGA) were rated with a 0-10 numerical rating scale, every 6 months during 2 years then at 3 years. Discordance was defined by the absolute difference |PGA-PhGA|≥3 (range 0-10) and was analysed at each visit. Determinants of (PGA-PhGA) were assessed at the visit level by a generalised linear mixed model. A total of 702 patients were analysed at baseline (401 with complete data over 3 years): mean age 33.8±8.6 years, 379 (54.0%) female, mean symptom duration 18.1±10.5 months. Mean PGA values were always higher than mean PhGA values with a mean absolute difference of 1.8 points. At baseline, 202 (28.8%) patients had discordance mainly by PGA>PhGA; over 3 years the frequency of discordance was stable (range 25.5-28.8%). Discordance was not stable at the patient level, 118 (29.4%) patients were discordant once and 88 (22.0%) twice, and only 92 (22.9%) more than twice. Determinants of (PGA-PhGA) were spine pain (β=0.24, p<0.001) and fatigue (β=0.13, p<0.001). Discordance concerned a quarter of patients with early axSpA. Over 3 years of follow-up, discordance did not decrease (no 'reference shift'). Discordance was not a stable trait, indicating discordance is not a patient characteristic. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/

Isotopic variants of light and heavy L-pyroglutamic acid succinimidyl esters as the derivatization reagents for DL-amino acid chiral metabolomics identification by liquid chromatography and electrospray ionization mass spectrometry.

PubMed

Mochizuki, Toshiki; Todoroki, Kenichiro; Inoue, Koichi; Min, Jun Zhe; Toyo'oka, Toshimasa

2014-02-06

L-Pyroglutamic acid succinimidyl ester (L-PGA-OSu) and its isotopic variant (L-PGA[d5]-OSu) were newly synthesized and evaluated as the chiral labeling reagents for the enantioseparation of amino acids, in terms of separation efficiency by reversed-phase chromatography and detection sensitivity by ESI-MS/MS. The enantiomers of amino acids were easily labeled with the reagents at 60°C within 10 min in an alkaline medium containing triethylamine. Although all the diastereomers derived from 18 proteolytic amino acids could not be satisfactorily separated, the pairs of 9 amino acids were completely separated by reversed-phase chromatography using the small particle (1.7 μm) ODS column (Rs=1.95-8.05). The characteristic daughter ions, i.e., m/z 84.04 and m/z 89.04, were detected from all the derivatives by the collision induced dissociation of the protonated molecular ions. A highly sensitive detection at a low-fmol level (0.5-3.2 fmol) was also obtained from the selected reaction monitoring (SRM) chromatograms. An isotope labeling strategy using light and heavy L-PGA-OSu for the differential analysis of the DL-amino acids in different sample groups is also presented in this paper. The differential analysis of biological sample (i.e., human serum) and food product (i.e., yogurt) were tried to demonstrate the efficiency of the proposed method. The ratios of the DL-amino acids in human serum samples, spiked with the different concentrations of D-amino acids, were determined by the procedures using L-PGA-OSu and L-PGA[d5]-OSu. The D/L ratios in the two sample groups at different concentrations of amino acids were similar to the theoretical values. Furthermore, the ratios of D/L-alanine values in different yogurt products were comparable to the ratios obtained from the d/l values using only light reagent (i.e., L-PGA-OSu). Consequently, the proposed strategy is useful for the differential analysis not only in biological samples but also in food products. Copyright © 2013 Elsevier B.V. All rights reserved.

Open-label study of etanercept treatment in patients with moderate-to-severe plaque psoriasis who lost a satisfactory response to adalimumab.

PubMed

Bagel, J; Tyring, S; Rice, K C; Collier, D H; Kricorian, G; Chung, J; Iles, J; Stolshek, B S; Kaliyaperumal, A; Papp, K A

2017-08-01

Some patients with plaque psoriasis experience secondary failure of tumour necrosis factor inhibitor therapy. To evaluate efficacy, safety and patient-reported outcomes (PROs) with etanercept in patients with secondary adalimumab failure. This phase IV open-label single-arm estimation study (NCT01543204) enrolled patients on adalimumab who had achieved static Physician's Global Assessment (sPGA) score 0/1 (clear/almost clear). Patients subsequently lost response, defined as sPGA ≥ 3 or loss of 50% improvement in Psoriasis Area and Severity Index (PASI 50). At baseline, patients had involved body surface area ≥ 10%, sPGA ≥ 3 and PASI ≥ 10. Antiadalimumab antibodies (ADAs) were measured at screening. Patients received etanercept 50 mg twice weekly for 12 weeks, followed by 50 mg weekly. The primary end point was sPGA 0/1 at week 12 (intention-to-treat analysis; no hypothesis tested). Additional outcomes included rates of sPGA 0/1, PASI responses, safety, PROs of itch, pain and flaking, Dermatology Life Quality Index, treatment satisfaction and Work Productivity and Activity Impairment questionnaire. Sixty-four patients enrolled; 67% had ADAs. sPGA 0/1 rates at week 12 were 39·7% [95% confidence interval (CI) 27·6-52·8; primary end point] and 45% (95% CI 29·3-61·5) for patients positive for ADAs and 35% (95% CI 15·4-59·2) for patients negative for ADAs. PASI 75 response rates at week 12 were 47·5% (95% CI 31·5-63·9) for patients who were positive for ADAs and 50% (95% CI 27·2-72·8) for patients negative for ADAs. No new safety signals were observed. PROs of itch, pain and flaking consistently improved at week 12 and were maintained through week 24. Patients with psoriasis who experienced secondary failure of adalimumab achieved satisfactory response to etanercept regardless of ADA status. © 2016 The Authors. British Journal of Dermatology published by John Wiley & Sons Ltd on behalf of British Association of Dermatologists.

Scaffold-assisted cartilage tissue engineering using infant chondrocytes from human hip cartilage.

PubMed

Kreuz, P C; Gentili, C; Samans, B; Martinelli, D; Krüger, J P; Mittelmeier, W; Endres, M; Cancedda, R; Kaps, C

2013-12-01

Studies about cartilage repair in the hip and infant chondrocytes are rare. The aim of our study was to evaluate the use of infant articular hip chondrocytes for tissue engineering of scaffold-assisted cartilage grafts. Hip cartilage was obtained from five human donors (age 1-10 years). Expanded chondrocytes were cultured in polyglycolic acid (PGA)-fibrin scaffolds. De- and re-differentiation of chondrocytes were assessed by histological staining and gene expression analysis of typical chondrocytic marker genes. In vivo, cartilage matrix formation was assessed by histology after subcutaneous transplantation of chondrocyte-seeded PGA-fibrin scaffolds in immunocompromised mice. The donor tissue was heterogenous showing differentiated articular cartilage and non-differentiated tissue and considerable expression of type I and II collagens. Gene expression analysis showed repression of typical chondrocyte and/or mesenchymal marker genes during cell expansion, while markers were re-induced when expanded cells were cultured in PGA-fibrin scaffolds. Cartilage formation after subcutaneous transplantation of chondrocyte loaded PGA-fibrin scaffolds in nude mice was variable, with grafts showing resorption and host cell infiltration or formation of hyaline cartilage rich in type II collagen. Addition of human platelet rich plasma (PRP) to cartilage grafts resulted robustly in formation of hyaline-like cartilage that showed type II collagen and regions with type X collagen. These results suggest that culture of expanded and/or de-differentiated infant hip cartilage cells in PGA-fibrin scaffolds initiates chondrocyte re-differentiation. The heterogenous donor tissue containing immature chondrocytes bears the risk of cartilage repair failure in vivo, which may be possibly overcome by the addition of PRP. Copyright © 2013 Osteoarthritis Research Society International. Published by Elsevier Ltd. All rights reserved.

Stoppers in RED II distraction device: is it possible to prevent pin migration?

PubMed

Mavili, Mehmet Emin; Vargel, Ibrahim; Tunçbilek, Gökhan

2004-05-01

Distraction osteogenesis has become popular for the treatment of hypoplastic congenital craniomaxillofacial anomalies. Rigid external distraction (RED II) after Le Fort III osteotomy was shown to be a highly effective treatment for the management of midface hypoplasia. This device is used with a halo vest, which is placed at the cranial equator. Intracranial penetration of the fixation pins of the halo is one of the complications of an external distraction device. To prevent pin penetration in rigid external distraction, the authors designed polylactic acid/polyglycolic acid (PLA/PGA) plates that were circular; the plates were 0.8 cm in diameter and had 1.5-mm holes in the center, through which the tip of the pins would pass. To quantify the applied torque by manual tightening of the screws of the distraction device and to measure intraosseous cone depth created by the penetration of the conical part of the screws with and without the PLA/PGA composite stopper, first an in vitro experiment was undertaken on cadaver. Then these PLA/PGA plaques, or stoppers, were placed over the bone surfaces of the cranium of the patients where the tip of the pins press. PLA/PGA stoppers are malleable and adapt their shape to the interactive forces between bone and the pins. They act as a second barrier, and spread the pressure of the screws to larger surfaces, thus securing better stabilization. The penetration of wider portions of the screw into scalp is reduced, minimizing the scalp damage caused by the screws. Biodegradable and biocompatible PLA/PGA stoppers avoid intracranial migration of the fixation pins, especially in children.

Pictorial representation of illness and self measure (PRISM): an effective tool to assess the burden of psoriasis.

PubMed

Fotiou, K; Hofmann, M; Kaufmann, R; Thaci, D

2015-12-01

Psoriasis has a negative impact on patient's' quality of life, which may reflect the physical and psychosocial impact of the disease. However, little is known about the perceived burden of disease. Pictorial Representation of Illness and Self Measure (PRISM), a pictorial tool, was developed to measure this global suffering. Capturing quality of life impairments in psoriasis is an integral part of assessing the overall disease severity and planning effective treatment strategies. To validate Pictorial Representation of Illness and Self Measure (PRISM) in psoriasis patients. An investigator initiated, prospective cohort study was performed in 108 outpatients with psoriasis to validate PRISM as an appropriate tool; Reliability was assessed in a cohort with controlled stable disease, repeated after 1 hour and after a 3-month follow-up phase; Convergent validity determined by correlation against measures of life quality (DLQI) and reported severity of psoriasis (PASI, PGA and BSA) was performed. For PRISM, we found a high reliability for short-term measurements (ICC = 0.98, P < 0.001) and for follow-up assessments at 3 months (ICC = 0.76, P < 0.001). Our investigation showed significant differences between patients with clear to minimal (PGA 0, 1), mild (PGA 2) and moderate-to-severe disease (PGA 3, 4) and significant (P < 0.001) correlation with DLQI, PGA, PASI and BSA (ρ = -0.62, -0.54, -0.44 and -0.39 respectively). PRISM is a highly reliable tool and new approach to assess perceived burden of patients with psoriasis. It is easy to use and we recommend the application as an additional outcome measure in clinical trial settings. © 2015 European Academy of Dermatology and Venereology.

Integrin-assisted drug delivery of nano-scaled polymer therapeutics bearing paclitaxel.

PubMed

Eldar-Boock, Anat; Miller, Keren; Sanchis, Joaquin; Lupu, Ruth; Vicent, María J; Satchi-Fainaro, Ronit

2011-05-01

Angiogenesis plays a prominent role in cancer progression. Anti-angiogenic therapy therefore, either alone or in combination with conventional cytotoxic therapy, offers a promising therapeutic approach. Paclitaxel (PTX) is a widely-used potent cytotoxic drug that also exhibits anti-angiogenic effects at low doses. However, its use, at its full potential, is limited by severe side effects. Here we designed and synthesized a targeted conjugate of PTX, a polymer and an integrin-targeted moiety resulting in a polyglutamic acid (PGA)-PTX-E-[c(RGDfK)(2)] nano-scaled conjugate. Polymer conjugation converted PTX to a macromolecule, which passively targets the tumor tissue exploiting the enhanced permeability and retention effect, while extravasating via the leaky tumor neovasculature. The cyclic RGD peptidomimetic enhanced the effects previously seen for PGA-PTX alone, utilizing the additional active targeting to the α(v)β(3) integrin overexpressed on tumor endothelial and epithelial cells. This strategy is particularly valuable when tumors are well-vascularized, but they present poor vascular permeability. We show that PGA is enzymatically-degradable leading to PTX release under lysosomal acidic pH. PGA-PTX-E-[c(RGDfK)(2)] inhibited the growth of proliferating α(v)β(3)-expressing endothelial cells and several cancer cells. We also showed that PGA-PTX-E-[c(RGDfK)(2)] blocked endothelial cells migration towards vascular endothelial growth factor; blocked capillary-like tube formation; and inhibited endothelial cells attachment to fibrinogen. Orthotopic studies in mice demonstrated preferential tumor accumulation of the RGD-bearing conjugate, leading to enhanced anti-tumor efficacy and a marked decrease in toxicity as compared with free PTX-treated mice. Copyright © 2011 Elsevier Ltd. All rights reserved.

Reliability of patient-reported outcomes in rheumatoid arthritis patients: an observational prospective study.

PubMed

Studenic, Paul; Stamm, Tanja; Smolen, Josef S; Aletaha, Daniel

2016-01-01

Patient-reported outcomes (PROs) such as pain, patient global assessment (PGA) and fatigue are regularly assessed in RA patients. In the present study, we aimed to explore the reliability and smallest detectable differences (SDDs) of these PROs, and whether the time between assessments has an impact on reliability. Forty RA patients on stable treatment reported the three PROs daily over two subsequent months. We assessed the reliability of these measures by calculating intraclass correlation coefficients (ICCs) and the SDDs for 1-, 7-, 14- and 28-day test-retest intervals. Overall, SDD and ICC were 25 mm and 0.67 for pain, 25 mm and 0.71 for PGA and 30 mm and 0.66 for fatigue, respectively. SDD was higher with longer time period between assessments, ranging from 19 mm (1-day intervals) to 30 mm (28-day intervals) for pain, 19 to 33 mm for PGA, and 26 to 34 mm for fatigue; correspondingly, ICC was smaller with longer intervals, and ranged between the 1- and the 28-day interval from 0.80 to 0.50 for pain, 0.83 to 0.57 for PGA and 0.76 to 0.58 for fatigue. The baseline simplified disease activity index did not have any influence on reliability. Lower baseline PRO scores led to smaller SDDs. Reliability of pain, PGA and fatigue measurements is dependent on the tested time interval and the baseline levels. The relatively high SDDs, even for patients in the lowest tertiles of their PROs, indicate potential issues for assessment of the presence of remission. © The Author 2015. Published by Oxford University Press on behalf of the British Society for Rheumatology. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Taiwan Earthquake Damage Index Sin Mei Nga* and Masataka Andob a* Department of Geology, Chinese Culture University, No. 55, Hwa-Kang Road, Yang-Ming-Shan, Taipei 11114, Taiwan b Institute of Earth Sciences, Academia Sinica, 128, Sec2, Academia Road, Nangang, Taipei 11529, Taiwan * Corresponding author. Tel.: +886 (02) 28 61 05 11 ext.26133 fax: +886 (02) 28 61 49 59 E-mail: wsw2@ulive.pccu.edu.tw or sin_mei_josephine_ng@hotmail.com

NASA Astrophysics Data System (ADS)

Ng, S.

2012-12-01

Taking advantage of a previous study and twelve-year, free-field strong motion data in Taiwan, a preliminary, five-level earthquake damage index is newly proposed: I-No (no damage), II-Very Light, III-Light, IV-Moderate, and V-Heavy. For index I, PGA and PGV are, respectively, <62.5 gal and <11 cm/s. Likewise, for index II, PGA is ≧62.5 and ≦187.5 gal; but, PGV is ≧11 and ≦35 cm/s. Similarly, PGA is ≧187.5 and ≦325 gal; but, PGV is ≧35 and ≦55 cm/s for index III. The corresponding PGA and PGV, for index IV, are ≧325 and ≦450 gal and ≧55 and ≦75 cm/s. Finally, for index V, PGA and PGV are respectively >450 gal and >75 cm/s. Ten damaging seismic events in the past twelve years are redefined using this new earthquake damage index, with the devastating Chi-Chi earthquake and one non-damaging event as reference earthquakes. This newly proposed index depicts seismic hazard of these earthquakes with higher accuracy when compared to the existing intensity scale in Taiwan region. For further analysis, Japan earthquakes are also plotted as references.

Efficacy and Safety of Ixekizumab in a Randomized, Double-Blinded, Placebo-Controlled Phase 3b Study of Patients with Moderate-to-Severe Genital Psoriasis.

PubMed

Ryan, C; Menter, A; Guenther, L; Blauvelt, A; Bissonnette, R; Meeuwis, K; Sullivan, J; Cather, J C; Yosipovitch, G; Gottlieb, A B; Merola, J F; Callis Duffin, K; Fretzin, S; Osuntokun, O O; Burge, R; Naegeli, A N; Yang, F E; Lin, C-Y; Todd, K; Potts Bleakman, A

2018-05-10

Genital psoriasis (GenPs) is a common, debilitating, and difficult to treat manifestation of plaque psoriasis. However, few controlled, interventional studies of GenPs exist. To determine the efficacy of ixekizumab versus placebo in patients with moderate-to-severe GenPs with BSA≥1%. Subjects with moderate-to-severe GenPs (defined as a baseline static Physician's Global Assessment of Genitalia [sPGA-G] score of ≥3) with BSA≥1% were randomized 1:1 to receive placebo (N=74) or the recommended dosing of ixekizumab (N=75). Major outcomes included the percentage of patients achieving 0 or 1 scores on the sPGA-G (primary endpoint), overall sPGA, GenPs Sexual Frequency Questionnaire (GenPs-SFQ) item 2, and a ≥3-point improvement from baseline on the GenPs itch numeric rating scale. At week 12, ixekizumab was superior to placebo on the sPGA-G 0/1 (73.3% versus 8.1%, p<0.001), overall sPGA 0/1 (73.3% versus 2.7%, p<0.001), GenPs-SFQ item 2 0/1 (78.4% versus 21.4%, p<0.001), and genital itch (59.7% versus 8.3%, p<0.001). No candidiasis was reported, no deaths occurred, and one (1.4%) serious adverse event was reported in a patient receiving placebo. Ixekizumab was superior to placebo for the treatment of moderate-to-severe GenPs with BSA≥1%. The safety profile of ixekizumab was consistent with previous studies in moderate-to-severe plaque psoriasis. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Functional magnetic stimulation of the abdominal muscles in humans.

PubMed

Polkey, M I; Luo, Y; Guleria, R; Hamnegård, C H; Green, M; Moxham, J

1999-08-01

Functional magnetic stimulation (FMS) of the thoracic nerve roots to simulate cough has been suggested as a treatment approach in patients unable to voluntarily activate the abdominal muscles. However, factors that could influence the efficacy of FMS in clinical use have not been evaluated. In the present investigation we studied train length, posture, and frequency to determine the optimal stimulation protocol. We also evaluated the use of a valve at the mouth to enhance glottic function and investigated whether lung volume at the time of stimulation would influence the tension generated by the abdominal muscles. Studies were performed using a Magstim rapid stimulator augmented by four booster packs in nine healthy subjects; we measured the change in gastric (DeltaPga(FMS)), esophageal (DeltaPes(FMS)), and mouth pressure and expiratory flow. With our apparatus pressure generation was maximized by having a train length of at least 300 ms and a frequency of 25 Hz. Posture and valve use were not important determinants of DeltaPga(FMS) or DeltaPes(FMS). Lung volume exerted only a minor influence on DeltaPga(FMS), but the ratio DeltaPes(FMS):DeltaPga(FMS) was increased at TLC compared with FRC. Expiratory flow was increased by adopting a seated posture and using an occlusion valve with an opening threshold close to the maximum DeltaPes(FMS) generated by the stimulus train; however, expiratory flow was susceptible to interference from glottic incoordination. Representative results (with train length 600 ms, 25 Hz, and 100% power, seated) were mean DeltaPga(FMS), 166 cm H(2)O; mean DeltaPes(FMS), 108 cm H(2)O; and mean expiratory flow, 311 L/min. We confirm that FMS of the abdominal muscles can generate a substantial positive intra-abdominal and intrathoracic pressure and, consequently, expiratory flow in normal subjects.

The Localized Scleroderma Cutaneous Assessment Tool: responsiveness to change in a pediatric clinical population.

PubMed

Kelsey, Christina E; Torok, Kathryn S

2013-08-01

Lack of agreement on how to accurately capture disease outcomes in localized scleroderma (LS) has hindered the development of efficacious treatment protocols. The LS Cutaneous Assessment Tool (LoSCAT), consisting of the modified LS Skin Severity Index (mLoSSI) and the LS Damage Index, has potential for use in clinical trials. The goal of this article is to further evaluate the clinical responsiveness of the LoSCAT. Based on the modifiable nature of disease activity versus damage, we expected the mLoSSI to be responsive to change. At 2 study visits, a physician completed the LoSCAT and Physician Global Assessment (PGA) of Disease Activity and of Disease Damage for 29 patients with LS. Spearman correlations were used to examine the relationships between the change in the LoSCAT and the PGA scores. To evaluate contrasted group validity, patients were grouped according to disease activity classification and change scores of groups were compared. Minimal clinically important differences were calculated and compared with the standard error of measurement. Change in the mLoSSI score correlated strongly with change in the PGA of Disease Activity score, whereas change in the LS Damage Index score correlated weakly with change in the PGA of Disease Damage score. The mLoSSI and PGA of Disease Activity exhibited contrasted group validity. Minimal clinically important differences for the activity measures were greater than the respective standard errors of measurement. Only 2 study visits were included in analysis. This study gives further evidence that the LoSCAT, specifically the mLoSSI, is a responsive, valid measure of activity in LS and should be used in future treatment studies. Copyright © 2013 American Academy of Dermatology, Inc. Published by Mosby, Inc. All rights reserved.

Controlled expression of pectic enzymes in Arabidopsis thaliana enhances biomass conversion without adverse effects on growth.

PubMed

Tomassetti, Susanna; Pontiggia, Daniela; Verrascina, Ilaria; Reca, Ida Barbara; Francocci, Fedra; Salvi, Gianni; Cervone, Felice; Ferrari, Simone

2015-04-01

Lignocellulosic biomass from agriculture wastes is a potential source of biofuel, but its use is currently limited by the recalcitrance of the plant cell wall to enzymatic digestion. Modification of the wall structural components can be a viable strategy to overcome this bottleneck. We have previously shown that the expression of a fungal polygalacturonase (pga2 from Aspergillus niger) in Arabidopsis and tobacco plants reduces the levels of de-esterified homogalacturonan in the cell wall and significantly increases saccharification efficiency. However, plants expressing pga2 show stunted growth and reduced biomass production, likely as a consequence of an extensive loss of pectin integrity during the whole plant life cycle. We report here that the expression in Arabidopsis of another pectic enzyme, the pectate lyase 1 (PL1) of Pectobacterium carotovorum, under the control of a chemically inducible promoter, results, after induction of the transgene, in a saccharification efficiency similar to that of plants expressing pga2. However, lines with high levels of transgene induction show reduced growth even in the absence of the inducer. To overcome the problem of plant fitness, we have generated Arabidopsis plants that express pga2 under the control of the promoter of SAG12, a gene expressed only during senescence. These plants expressed pga2 only at late stages of development, and their growth was comparable to that of WT plants. Notably, leaves and stems of transgenic plants were more easily digested by cellulase, compared to WT plants, only during senescence. Expression of cell wall-degrading enzymes at the end of the plant life cycle may be therefore a useful strategy to engineer crops unimpaired in biomass yield but improved for bioconversion. Copyright © 2014 Elsevier Ltd. All rights reserved.

Summed and Weighted Summary Scores for the Medsger Disease Severity Scale Compared with the Physician's Global Assessment of Disease Severity in Systemic Sclerosis.

PubMed

Harel, Daphna; Hudson, Marie; Iliescu, Alexandra; Baron, Murray; Steele, Russell

2016-08-01

To develop a weighted summary score for the Medsger Disease Severity Scale (DSS) and to compare its measurement properties with those of a summed DSS score and a physician's global assessment (PGA) of severity score in systemic sclerosis (SSc). Data from 875 patients with SSc enrolled in a multisite observational research cohort were extracted from a central database. Item response theory was used to estimate weights for the DSS weighted score. Intraclass correlation coefficients (ICC) and convergent, discriminative, and predictive validity of the 3 summary measures in relation to patient-reported outcomes (PRO) and mortality were compared. Mean PGA was 2.69 (SD 2.16, range 0-10), mean DSS summed score was 8.60 (SD 4.02, range 0-36), and mean DSS weighted score was 8.11 (SD 4.05, range 0-36). ICC were similar for all 3 measures [PGA 6.9%, 95% credible intervals (CrI) 2.1-16.2; DSS summed score 2.5%, 95% CrI 0.4-6.7; DSS weighted score 2.0%, 95% CrI 0.1-5.6]. Convergent and discriminative validity of the 3 measures for PRO were largely similar. In Cox proportional hazards models adjusting for age and sex, the 3 measures had similar predictive ability for mortality (adjusted R(2) 13.9% for PGA, 12.3% for DSS summed score, and 10.7% DSS weighted score). The 3 summary scores appear valid and perform similarly. However, there were some concerns with the weights computed for individual DSS scales, with unexpected low weights attributed to lung, heart, and kidney, leading the PGA to be the preferred measure at this time. Further work refining the DSS could improve the measurement properties of the DSS summary scores.

Seismic hazard assessment for Guam and the Northern Mariana Islands

USGS Publications Warehouse

Mueller, Charles S.; Haller, Kathleen M.; Luco, Nicholas; Petersen, Mark D.; Frankel, Arthur D.

2012-01-01

We present the results of a new probabilistic seismic hazard assessment for Guam and the Northern Mariana Islands. The Mariana island arc has formed in response to northwestward subduction of the Pacific plate beneath the Philippine Sea plate, and this process controls seismic activity in the region. Historical seismicity, the Mariana megathrust, and two crustal faults on Guam were modeled as seismic sources, and ground motions were estimated by using published relations for a firm-rock site condition. Maps of peak ground acceleration, 0.2-second spectral acceleration for 5 percent critical damping, and 1.0-second spectral acceleration for 5 percent critical damping were computed for exceedance probabilities of 2 percent and 10 percent in 50 years. For 2 percent probability of exceedance in 50 years, probabilistic peak ground acceleration is 0.94 gravitational acceleration at Guam and 0.57 gravitational acceleration at Saipan, 0.2-second spectral acceleration is 2.86 gravitational acceleration at Guam and 1.75 gravitational acceleration at Saipan, and 1.0-second spectral acceleration is 0.61 gravitational acceleration at Guam and 0.37 gravitational acceleration at Saipan. For 10 percent probability of exceedance in 50 years, probabilistic peak ground acceleration is 0.49 gravitational acceleration at Guam and 0.29 gravitational acceleration at Saipan, 0.2-second spectral acceleration is 1.43 gravitational acceleration at Guam and 0.83 gravitational acceleration at Saipan, and 1.0-second spectral acceleration is 0.30 gravitational acceleration at Guam and 0.18 gravitational acceleration at Saipan. The dominant hazard source at the islands is upper Benioff-zone seismicity (depth 40–160 kilometers). The large probabilistic ground motions reflect the strong concentrations of this activity below the arc, especially near Guam.

The evaluation of speed skating helmet performance through peak linear and rotational accelerations.

PubMed

Karton, Clara; Rousseau, Philippe; Vassilyadi, Michael; Hoshizaki, Thomas Blaine

2014-01-01

Like many sports involving high speeds and body contact, head injuries are a concern for short track speed skating athletes and coaches. While the mandatory use of helmets has managed to nearly eliminate catastrophic head injuries such as skull fractures and cerebral haemorrhages, they may not be as effective at reducing the risk of a concussion. The purpose of this study was to evaluate the performance characteristics of speed skating helmets with respect to managing peak linear and peak rotational acceleration, and to compare their performance against other types of helmets commonly worn within the speed skating sport. Commercially available speed skating, bicycle and ice hockey helmets were evaluated using a three-impact condition test protocol at an impact velocity of 4 m/s. Two speed skating helmet models yielded mean peak linear accelerations at a low-estimated probability range for sustaining a concussion for all three impact conditions. Conversely, the resulting mean peak rotational acceleration values were all found close to the high end of a probability range for sustaining a concussion. A similar tendency was observed for the bicycle and ice hockey helmets under the same impact conditions. Speed skating helmets may not be as effective at managing rotational acceleration and therefore may not successfully protect the user against risks associated with concussion injuries.

Analysis of the possibility of a PGA309 integrated circuit application in pressure sensors

NASA Astrophysics Data System (ADS)

Walendziuk, Wojciech; Baczewski, Michal; Idzkowski, Adam

2016-09-01

This article present the results of research concerning the analysis of the possibilities of applying a PGA309 integrated circuit in transducers used for pressure measurement. The experiments were done with the use of a PGA309EVM-USB evaluation circuit with a BD|SENSORS pressure sensor. A specially prepared MATLAB script was used in the process of the calibration setting choice and the results analysis. The article discusses the worked out algorithm that processes the measurement results, i.e. the algorithm which calculates the desired gain and the offset adjustment voltage of the transducer measurement bridge in relation to the input signal range of the integrated circuit and the temperature of the environment (temperature compensation). The checking procedure was conducted in a measurement laboratory and the obtained result were analyzed and discussed.

Transportations Systems Modeling and Applications in Earthquake Engineering

DTIC Science & Technology

2010-07-01

49 Figure 6 PGA map of a M7.7 earthquake on all three New Madrid fault segments (g)............... 50...Memphis, Tennessee. The NMSZ was responsible for the devastating 1811-1812 New Madrid earthquakes , the largest earthquakes ever recorded in the...Figure 6 PGA map of a M7.7 earthquake on all three New Madrid fault segments (g) Table 1 Fragility parameters for MSC steel bridge (Padgett 2007

Anti-herpes simplex virus 1 and immunomodulatory activities of a poly-γ- glutamic acid from Bacillus horneckiae strain APA of shallow vent origin.

PubMed

Marino-Merlo, Francesca; Papaianni, Emanuela; Maugeri, Teresa L; Zammuto, Vincenzo; Spanò, Antonio; Nicolaus, Barbara; Poli, Annarita; Di Donato, Paola; Mosca, Claudia; Mastino, Antonio; Gugliandolo, Concetta

2017-10-01

Herpes simplex virus type 1 (HSV-1) is responsible of common and widespread viral infections in humans through the world, and of rare, but extremely severe, clinical syndromes in the central nervous system. The emergence of resistant strains to drugs actually in use encourages the searching for novel antiviral compounds, including those of natural origin. In this study, the recently described poly-γ-glutamic acid (γ-PGA-APA), produced by the marine thermotolerant Bacillus horneckiae strain APA, and previously shown to possess biological and antiviral activity, was evaluated for its anti-HSV-1 and immunomodulatory properties. The biopolymer hindered the HSV-1 infection in the very early phase of virus replication. In addition, the γ-PGA-APA was shown to exert low cytotoxicity and noticeable immunomodulatory activities towards TNF-α and IL-1β gene expression. Moreover, the capacity to positively modulate the transcriptional activity of the cytokine genes was paired with increased level of activation of the transcription factor NF-kB by γ-PGA-APA. Overall, as non-cytotoxic biopolymer able to contribute in the antiviral defense against HSV-1, γ-PGA-APA could lead to the development of novel natural drugs for alternative therapies.

Preparation of the chitosan/poly(glutamic acid)/alginate polyelectrolyte complexing hydrogel and study on its drug releasing property.

PubMed

Chen, Yu; Yan, Xiaoting; Zhao, Jian; Feng, Huaiyu; Li, Puwang; Tong, Zongrui; Yang, Ziming; Li, Sidong; Yang, Jueying; Jin, Shaohua

2018-07-01

In the current study, a novel semi-dissolution/acidification/sol-gel transition (SD-A-SGT) method was explored for the preparation of polyelectrolyte complexing (PEC) composite hydrogels with natural polymers only. A chitosan (CS) powder was uniformly dispersed in a solution of poly(glutamic acid) (PGA) and alginate (SA) to form a semi-dissolved slurry mixture that was then exposed to an gaseous acidic atmosphere. CS was gradually dissolved and interacted with PGA and SA to form a CS/PGA/SA PEC composite hydrogel with a homogeneous structure. The SD-A-SGT procedure was able to overcome the shortcomings of direct mixing method via the PEC interaction. The effects of the hydrogel composition on its structure and properties were investigated by FTIR, XRD, rheology study, XPS, SEM, and swelling kinetics. The drug delivery performance of the CS/PGA/SA hydrogel was explored using piroxicam (PXC) as a model drug. PXC was in situ embedded in the hydrogel by the SD-A-SGT method. The hydrogel exhibited pH responsive drug release behaviors that were affected by the hydrogel composition. In all, the SD-A-SGT method for preparing PEC composite hydrogels has a great application potential in constructing the CS based hydrogels as medical materials. Copyright © 2018 Elsevier Ltd. All rights reserved.

Deciphering the kinetic mechanisms controlling selected plant ADP-glucose pyrophosphorylases.

PubMed

Boehlein, Susan K; Shaw, Janine R; Hwang, Seon K; Stewart, Jon D; Curtis Hannah, L

2013-07-15

ADP-Glc pyrophosphorylase (AGPase), a rate-limiting enzyme in starch biosynthesis, is controlled by thermostability and allosteric regulation. Previous studies suggested that redox affects turnover number and heat stability of AGPases. Here, we investigated how allostery and redox state affect kinetic mechanisms of the reduced, heat labile and the oxidized, heat stable potato tuber enzymes; the heat labile maize endosperm enzyme and a chimeric maize/potato heat stable enzyme that lacks the cysteine responsible for redox changes. With 3-PGA, all AGPases followed a Theorell-Chance Bi Bi mechanism with ATP binding first and ADP-Glc releasing last. 3-PGA increases the binding affinity for both substrates with little effect on velocity for the maize and MP isoforms. By contrast, 3-PGA increases the velocity and the affinity for G-1-P for the potato enzymes. Redox state does not affect kcat of the two potato isoforms. Without 3-PGA the oxidized potato enzyme exhibits a rapid equilibrium random Bi Bi mechanism with a dead end ternary complex. This fundamental change from rapid, ordered binding with little buildup of intermediates to a mechanism featuring relatively slow, random binding is unique to the oxidized potato tuber enzyme. Finally, ADP-Glc the physiologically relevant product of this enzyme has complex, isoform-specific effects on catalysis. Copyright © 2013 Elsevier Inc. All rights reserved.

Enhanced Harvesting of Chlorella vulgaris Using Combined Flocculants.

PubMed

Ma, Xiaochen; Zheng, Hongli; Zhou, Wenguang; Liu, Yuhuan; Chen, Paul; Ruan, Roger

2016-10-01

In this study, a novel flocculation strategy for harvesting Chlorella vulgaris with combined flocculants, poly (γ-glutamic acid) (γ-PGA) and calcium oxide (CaO), has been developed. The effect of flocculant dosage, the order of flocculant addition, mixing speed, and growth stage on the harvesting efficiency was evaluated. Results showed that the flocculation using combined flocculants significantly decreases the flocculant dosage and settling time compared with control. It was also found that CaO and γ-PGA influenced microalgal flocculation by changing the zeta potential of cells and pH of microalgal suspension. The most suitable order of flocculant addition was CaO first and then γ-PGA. The optimal mixing speed was 200 rpm for 0.5 min, followed by 50 rpm for another 4.5 min for CaO and γ-PGA with the highest flocculation efficiency of 95 % and a concentration factor of 35.5. The biomass concentration and lipid yield of the culture reusing the flocculated medium were similar to those when a fresh medium was used. Overall, the proposed method requires low energy input, alleviates biomass and water contamination, and reduces utilization of water resources and is feasible for harvesting C. vulgaris for biofuel and other bio-based chemical production.

Analysis of the Source and Ground Motions from the 2017 M8.2 Tehuantepec and M7.1 Puebla Earthquakes

NASA Astrophysics Data System (ADS)

Melgar, D.; Sahakian, V. J.; Perez-Campos, X.; Quintanar, L.; Ramirez-Guzman, L.; Spica, Z.; Espindola, V. H.; Ruiz-Angulo, A.; Cabral-Cano, E.; Baltay, A.; Geng, J.

2017-12-01

The September 2017 Tehuantepec and Puebla earthquakes were intra-slab earthquakes that together caused significant damage in broad regions of Mexico, including the states of Oaxaca, Chiapas, Morelos, Puebla, Mexico, and Mexico City. Ground motions in Mexico City have approximately the same angle of incidence from both earthquakes and potentially sample similar paths close to the city. We examine site effects and source terms by analysis of residuals between Ground-Motion Prediction Equations (GMPEs) and observed ground motions for both of these events at stations from the Servicio Sismólogico Nacional, Instituto de Ingeniería, and the Instituto de Geofísica Red del Valle de Mexico networks. GMPEs are a basis for seismic design, but also provide median ground motion values to act as a basis for comparison of individual earthquakes and site responses. First, we invert for finite-fault slip inversions for Tehuantepec with high-rate GPS, static GPS, tide gauge and DART buoy data, and for Puebla with high-rate GPS and strong motion data. Using the distance from the stations with ground motion observations to the derived slip models, we use the GMPEs of Garcia et al. (2005), Zhao et al. (2006), and Abrahamson, Silva and Kamai (2014), to compute predicted values of peak ground acceleration and velocity (PGA and PGV) and response spectral accelerations (SA). Residuals between observed and predicted ground motion parameters are then computed for each recording, and are decomposed into event and site components using a mixed effects regression. We analyze these residuals as an adjustment away from median ground motions in the region to glean information about the earthquake source properties, as well as local site response in and outside of the Mexico City basin. The event and site terms are then compared with available values of stress drop for the two earthquakes, and Vs30 values for the sites, respectively. This analysis is useful in determining which GMPE is most appropriate in the central Mexico region, important for future ground motion studies and rapid response products such as ShakeMap.

Foot strike pattern differently affects the axial and transverse components of shock acceleration and attenuation in downhill trail running.

PubMed

Giandolini, Marlene; Horvais, Nicolas; Rossi, Jérémy; Millet, Guillaume Y; Samozino, Pierre; Morin, Jean-Benoît

2016-06-14

Trail runners are exposed to a high number of shocks, including high-intensity shocks on downhill sections leading to greater risk of osseous overuse injury. The type of foot strike pattern (FSP) is known to influence impact severity and lower-limb kinematics. Our purpose was to investigate the influence of FSP on axial and transverse components of shock acceleration and attenuation during an intense downhill trail run (DTR). Twenty-three trail runners performed a 6.5-km DTR (1264m of negative elevation change) as fast as possible. Four tri-axial accelerometers were attached to the heel, metatarsals, tibia and sacrum. Accelerations were continuously recorded at 1344Hz and analyzed over six sections (~400 steps per subject). Heel and metatarsal accelerations were used to identify the FSP. Axial, transverse and resultant peak accelerations, median frequencies and shock attenuation within the impact-related frequency range (12-20Hz) were assessed between tibia and sacrum. Multiple linear regressions showed that anterior (i.e. forefoot) FSPs were associated with higher peak axial acceleration and median frequency at the tibia, lower transverse median frequencies at the tibia and sacrum, and lower transverse peak acceleration at the sacrum. For resultant acceleration, higher tibial median frequency but lower sacral peak acceleration were reported with forefoot striking. FSP therefore differently affects the components of impact shock acceleration. Although a forefoot strike reduces impact severity and impact frequency content along the transverse axis, a rearfoot strike decreases them in the axial direction. Globally, the attenuation of axial and resultant impact-related vibrations was improved using anterior FSPs. Copyright © 2016 Elsevier Ltd. All rights reserved.

Probabilistic and Scenario Seismic and Liquefaction Hazard Analysis of the Mississippi Embayment Incorporating Nonlinear Site Effects

NASA Astrophysics Data System (ADS)

Cramer, C. H.; Dhar, M. S.

2017-12-01

The influence of deep sediment deposits of the Mississippi Embayment (ME) on the propagation of seismic waves is poorly understood and remains a major source of uncertainty for site response analysis. Many researchers have studied the effects of these deposits on seismic hazard of the area using available information at the time. In this study, we have used updated and newly available resources for seismic and liquefaction hazard analyses of the ME. We have developed an improved 3D geological model. Additionally, we used surface geological maps from Cupples and Van Arsdale (2013) to prepare liquefaction hazard maps. Both equivalent linear and nonlinear site response codes were used to develop site amplification distributions for use in generating hazard maps. The site amplification distributions are created using the Monte Carlo approach of Cramer et al. (2004, 2006) on a 0.1-degree grid. The 2014 National Seismic Hazard model and attenuation relations (Petersen et al., 2014) are used to prepare seismic hazard maps. Then liquefaction hazard maps are generated using liquefaction probability curves from Holzer (2011) and Cramer et al. (2015). Equivalent linear response (w/ increased precision, restricted nonlinear behavior with depth) shows similar hazard for the ME compared to nonlinear analysis (w/o pore pressure) results. At short periods nonlinear deamplification dominates the hazard, but at long periods resonance amplification dominates. The liquefaction hazard tends to be high in Holocene and late Pleistocene lowland sediments, even with lowered ground water levels, and low in Pleistocene loess of the uplands. Considering pore pressure effects in nonlinear site response analysis at a test site on the lowlands shows amplification of ground motion at short periods. PGA estimates from ME liquefaction and MMI observations are in the 0.25 to 0.4 g range. Our estimated M7.5 PGA hazard within 10 km of the fault can exceed this. Ground motion observations from liquefaction sites in New Zealand and Japan support PGAs below 0.4 g, except at sites within 20 km exhibiting pore-pressure induced acceleration spikes due to cyclic mobility where PGA ranges from 0.5 to 1.5 g. This study is being extended to more detailed seismic and liquefaction hazard studies in five western Tennessee counties under a five year grant from HUD.

The location of the tibial accelerometer does influence impact acceleration parameters during running.

PubMed

Lucas-Cuevas, Angel Gabriel; Encarnación-Martínez, Alberto; Camacho-García, Andrés; Llana-Belloch, Salvador; Pérez-Soriano, Pedro

2017-09-01

Tibial accelerations have been associated with a number of running injuries. However, studies attaching the tibial accelerometer on the proximal section are as numerous as those attaching the accelerometer on the distal section. This study aimed to investigate whether accelerometer location influences acceleration parameters commonly reported in running literature. To fulfil this purpose, 30 athletes ran at 2.22, 2.78 and 3.33 m · s -1 with three accelerometers attached with double-sided tape and tightened to the participants' tolerance on the forehead, the proximal section of the tibia and the distal section of the tibia. Time-domain (peak acceleration, shock attenuation) and frequency-domain parameters (peak frequency, peak power, signal magnitude and shock attenuation in both the low and high frequency ranges) were calculated for each of the tibial locations. The distal accelerometer registered greater tibial acceleration peak and shock attenuation compared to the proximal accelerometer. With respect to the frequency-domain analysis, the distal accelerometer provided greater values of all the low-frequency parameters, whereas no difference was observed for the high-frequency parameters. These findings suggest that the location of the tibial accelerometer does influence the acceleration signal parameters, and thus, researchers should carefully consider the location they choose to place the accelerometer so that equivalent comparisons across studies can be made.

Martial arts striking hand peak acceleration, accuracy and consistency.

PubMed

Neto, Osmar Pinto; Marzullo, Ana Carolina De Miranda; Bolander, Richard P; Bir, Cynthia A

2013-01-01

The goal of this paper was to investigate the possible trade-off between peak hand acceleration and accuracy and consistency of hand strikes performed by martial artists of different training experiences. Ten male martial artists with training experience ranging from one to nine years volunteered to participate in the experiment. Each participant performed 12 maximum effort goal-directed strikes. Hand acceleration during the strikes was obtained using a tri-axial accelerometer block. A pressure sensor matrix was used to determine the accuracy and consistency of the strikes. Accuracy was estimated by the radial distance between the centroid of each subject's 12 strikes and the target, whereas consistency was estimated by the square root of the 12 strikes mean squared distance from their centroid. We found that training experience was significantly correlated to hand peak acceleration prior to impact (r(2)=0.456, p =0.032) and accuracy (r(2)=0. 621, p=0.012). These correlations suggest that more experienced participants exhibited higher hand peak accelerations and at the same time were more accurate. Training experience, however, was not correlated to consistency (r(2)=0.085, p=0.413). Overall, our results suggest that martial arts training may lead practitioners to achieve higher striking hand accelerations with better accuracy and no change in striking consistency.

Peaks in Phase Space Density: A Survey of the Van Allen Probes Era

NASA Astrophysics Data System (ADS)

Boyd, A. J.; Turner, D. L.; Reeves, G. D.; Spence, H. E.

2017-12-01

One of the challenges of radiation belt studies is the differentiation between acceleration mechanisms, particularly local acceleration and radial diffusion. This is often done through careful examination of phase space density profiles in terms of adiabatic coordinates. In particular, local acceleration processes produce growing peaks in phase space density. Many previous studies have shown clear observations of these features for individual events. However, it remains unclear how often and where these growing peaks are observed over a long time period. With the availability of several years of high quality observations from multiple spacecraft, we now have an opportunity to quantify phase space density profiles not only for multiple events, but also across a wide range of energies. In this study, we examine phase space density from more than four years of data from the Van Allen Probes and THEMIS to determine the statistical properties of the observed peaks in phase space density. First, we determine how often growing peaks are observed. Second, we examine where the peaks are located in terms of the adiabatic invariants mu, K and L* and how these locations relate to geomagnetic indices, solar wind conditions and the plasmapause location. Third, we explore how these peaks evolve in time. Together, these results will reveal the relative importance of different acceleration processes and how these affect the various electron populations within the radiation belt.

[In vitro tendon engineering using human dermal fibroblasts].

PubMed

Deng, Dan; Liu, Wei; Xu, Feng; Wu, Xiao-Li; Wei, Xian; Zhong, Bin; Cui, Lei; Cao, Yi-Lin

2008-04-01

To examine the feasibility of using human dermal fibroblasts (DFbs) and polyglycolic acids (PGA) to engineer tendon in vitro. Human dermal fibroblasts (DFbs) were isolated from the foreskin tissues of children obtained during operation with collagenase and cultured in vitro. Human tendon was obtained from a patient undergoing amputation during operation to isolate tenocytes. The DFbs of second passage were seeded on PGA fibers to form cell-scaffold constructs in shape of tendons. Those constructs were divided into 4 groups: experimental group (n = 15) with the DFbs inoculated on PGA scaffold under constant tension generated by a U-shaped spring, control group 1 (n = 15) with the DFbs inoculated on PGA scaffold without tension, control group 2 (n = 3), i. e., cell-free pure PGA scaffolds under tension, and control group 3 (n = 5), i. e., tenocyte-scaffold constructs under tension that was harvested only at the ninth week. Samples were harvested 2, 5, 9, 14, and 18 weeks later to undergo histological examination and biomechanical test. Two weeks later histological examination showed that the constructs were mainly composed of PGA fibers in both the experimental group and the group without tension. Transmission electron microscopy showed fine cell attachment and stretching on the scaffold. By the 5th week, a neo-tendon was formed in all groups except for the cell-free group, and histology revealed the formation of collagen fibers. At the 9th week, the PGA fibers of the cell-free group were broken and partially degraded, the neo-tendon's diameter of the experimental group was (1.18 +/- 0.25) mm, significantly thinner than that of the group without tension[ (2.43 +/- 0.49) mm, P = 0.017]. The gross morphology of tendons of the experimental group and tenocyte group were similar to each other except for more cells in the experimental group. In experimental group, immunohistochemistry revealed the production of fibers of collagen type I & III that were aligned longitudinally along the force axis like the normal tendon pattern. An irregular collagen pattern was observed in the group without tension. The maximum tensile stress of the experimental group was (2.75 +/- 0.59) MPa, similar to that of the tenocyte group [(3.08 +/- 0.30) MPa, P = 0.439], and significantly greater than that of the group without tension [(0.82 +/- 0.21) MPa, P = 0.006]. At the 14th week the PGA fibers of the cell-free group were mostly degraded. In addition, more dead cells and tissue atrophy were observed in the experimental group, and the tensile stress was higher than that of the same group by the 9th week. In the 18th week the number of hollow fiber of the experimental group was more obvious, the number of dead cells increased, and the tensile stress was lower, however, there was no significant difference in other characteristics compared with those in the 14th week. DFbs can be used for in vitro tendon engineering as tenocytes. Mechanical stimulation by statistic strain is beneficial for tissue formation, but the effect may not be optimal if the tension is applied for too long.

Biomechanical tolerance of whole lumbar spines in straightened posture subjected to axial acceleration.

PubMed

Stemper, Brian D; Chirvi, Sajal; Doan, Ninh; Baisden, Jamie L; Maiman, Dennis J; Curry, William H; Yoganandan, Narayan; Pintar, Frank A; Paskoff, Glenn; Shender, Barry S

2018-06-01

Quantification of biomechanical tolerance is necessary for injury prediction and protection of vehicular occupants. This study experimentally quantified lumbar spine axial tolerance during accelerative environments simulating a variety of military and civilian scenarios. Intact human lumbar spines (T12-L5) were dynamically loaded using a custom-built drop tower. Twenty-three specimens were tested at sub-failure and failure levels consisting of peak axial forces between 2.6 and 7.9 kN and corresponding peak accelerations between 7 and 57 g. Military aircraft ejection and helicopter crashes fall within these high axial acceleration ranges. Testing was stopped following injury detection. Both peak force and acceleration were significant (p < 0.0001) injury predictors. Injury probability curves using parametric survival analysis were created for peak acceleration and peak force. Fifty-percent probability of injury (95%CI) for force and acceleration were 4.5 (3.9-5.2 kN), and 16 (13-19 g). A majority of injuries affected the L1 spinal level. Peak axial forces and accelerations were greater for specimens that sustained multiple injuries or injuries at L2-L5 spinal levels. In general, force-based tolerance was consistent with previous shorter-segment lumbar spine testing (3-5 vertebrae), although studies incorporating isolated vertebral bodies reported higher tolerance attributable to a different injury mechanism involving structural failure of the cortical shell. This study identified novel outcomes with regard to injury patterns, wherein more violent exposures produced more injuries in the caudal lumbar spine. This caudal migration was likely attributable to increased injury tolerance at lower lumbar spinal levels and a faster inertial mass recruitment process for high rate load application. Published 2017. This article is a U.S. Government work and is in the public domain in the USA. J Orthop Res 36:1747-1756, 2018. Published 2017. This article is a U.S. Government work and is in the public domain in the USA.

Treatment of vinasse from tequila production using polyglutamic acid.

PubMed

Carvajal-Zarrabal, Octavio; Nolasco-Hipólito, Cirilo; Barradas-Dermitz, Dulce Ma; Hayward-Jones, Patricia M; Aguilar-Uscanga, Ma Guadalupe; Bujang, Kopli

2012-03-01

Vinasse, the wastewater from ethanol distillation, is characterised by high levels of organic and inorganic matter, high exit process temperature (ca. 90°C) and low pH (3.0-4.5). In this study, the treatment of tequila vinasse was achieved by a flocculation-coagulation process using poly-γ-glutamic acid (PGA). Results showed that the use of PGA (250-300 ppm) combined with sodium hypochlorite and sand filtration managed to remove about 70% of the turbidity and reduced chemical oxygen demand (COD) by 79.5% with the extra benefit of colour removal. PGA showed its best flocculating activity at pH 2.5-3.5 and a temperature of 30-55°C. Such a treatment may be a solution for small tequila companies for which other solutions to deal with their vinasse may not be economically affordable. Copyright © 2011 Elsevier Ltd. All rights reserved.

Seismic hazard assessment of Syria using seismicity, DEM, slope, active tectonic and GIS

NASA Astrophysics Data System (ADS)

Ahmad, Raed; Adris, Ahmad; Singh, Ramesh

2016-07-01

In the present work, we discuss the use of an integrated remote sensing and Geographical Information System (GIS) techniques for evaluation of seismic hazard areas in Syria. The present study is the first time effort to create seismic hazard map with the help of GIS. In the proposed approach, we have used Aster satellite data, digital elevation data (30 m resolution), earthquake data, and active tectonic maps. Many important factors for evaluation of seismic hazard were identified and corresponding thematic data layers (past earthquake epicenters, active faults, digital elevation model, and slope) were generated. A numerical rating scheme has been developed for spatial data analysis using GIS to identify ranking of parameters to be included in the evaluation of seismic hazard. The resulting earthquake potential map delineates the area into different relative susceptibility classes: high, moderate, low and very low. The potential earthquake map was validated by correlating the obtained different classes with the local probability that produced using conventional analysis of observed earthquakes. Using earthquake data of Syria and the peak ground acceleration (PGA) data is introduced to the model to develop final seismic hazard map based on Gutenberg-Richter (a and b values) parameters and using the concepts of local probability and recurrence time. The application of the proposed technique in Syrian region indicates that this method provides good estimate of seismic hazard map compared to those developed from traditional techniques (Deterministic (DSHA) and probabilistic seismic hazard (PSHA). For the first time we have used numerous parameters using remote sensing and GIS in preparation of seismic hazard map which is found to be very realistic.

"The Big One" in Taipei: Numerical Simulation Study of the Sanchiao Fault Earthquake Scenarios

NASA Astrophysics Data System (ADS)

Wang, Y.; Lee, S.; Ng, S.

2012-12-01

Sanchiao fault is a western boundary fault of the Taipei basin located in northern Taiwan, close to the densely populated Taipei metropolitan area. According to the report of Central Geological Survey, the terrestrial portion of the Sanchiao fault can be divided into north and south segments. The south segment is about 13 km and north segment is about 21 km. Recent study demonstrated that there are about 40 km of the fault trace that extended to the marine area offshore of northern Taiwan. Combined with the marine and terrestrial parts, the total fault length of Sanchiao fault could be nearly 70 kilometers. Based on the recipe proposed by IRIKURA and Miyake (2010), we estimate the Sanchiao fault has the potential to produce an earthquake with moment magnitude larger than Mw 7.2. The total area of fault rupture is about 1323 km2, asperity to the total fault plane is 22%, and the slips of the asperity and background are 2.8 m and 1.6 m respectively. Use the characteristic source model based on this assumption, the 3D spectral-element method simulation results indicate that Peak ground acceleration (PGA) is significantly stronger along the surface fault-rupture. The basin effects play an important role when wave propagates in the Taipei basin which cause seismic wave amplified and prolong the shaking for a very long time. It is worth noting that, when the rupture starts from the southern tip of the fault, i.e. the hypocenter locates in the basin, the impact of the Sanchiao fault earthquake to the Taipei metropolitan area will be the most serious. The strong shaking can cover the entire Taipei city, and even across the basin that extended to eastern-most part of northern Taiwan.

Uncertainty, variability, and earthquake physics in ground‐motion prediction equations

USGS Publications Warehouse

Baltay, Annemarie S.; Hanks, Thomas C.; Abrahamson, Norm A.

2017-01-01

Residuals between ground‐motion data and ground‐motion prediction equations (GMPEs) can be decomposed into terms representing earthquake source, path, and site effects. These terms can be cast in terms of repeatable (epistemic) residuals and the random (aleatory) components. Identifying the repeatable residuals leads to a GMPE with reduced uncertainty for a specific source, site, or path location, which in turn can yield a lower hazard level at small probabilities of exceedance. We illustrate a schematic framework for this residual partitioning with a dataset from the ANZA network, which straddles the central San Jacinto fault in southern California. The dataset consists of more than 3200 1.15≤M≤3 earthquakes and their peak ground accelerations (PGAs), recorded at close distances (R≤20  km). We construct a small‐magnitude GMPE for these PGA data, incorporating VS30 site conditions and geometrical spreading. Identification and removal of the repeatable source, path, and site terms yield an overall reduction in the standard deviation from 0.97 (in ln units) to 0.44, for a nonergodic assumption, that is, for a single‐source location, single site, and single path. We give examples of relationships between independent seismological observables and the repeatable terms. We find a correlation between location‐based source terms and stress drops in the San Jacinto fault zone region; an explanation of the site term as a function of kappa, the near‐site attenuation parameter; and a suggestion that the path component can be related directly to elastic structure. These correlations allow the repeatable source location, site, and path terms to be determined a priori using independent geophysical relationships. Those terms could be incorporated into location‐specific GMPEs for more accurate and precise ground‐motion prediction.

Impact data from a transport aircraft during a controlled impact demonstration

NASA Technical Reports Server (NTRS)

Fasanella, E. L.; Alfaro-Bou, E.; Hayduk, R. J.

1986-01-01

On December 1, 1984, the FAA and NASA conducted a remotely piloted air-to-ground crash test of a Boeing 720 transport aircraft instrumented to measure crash loads of the structure and the anthropomorphic dummy passengers. Over 330 time histories of accelerations and loads collected during the Full-Scale Transport Controlled Impact Demonstration (CID) for the 1-sec period after initial impact are presented. Although a symmetric 1 deg. nose-up attitude with a 17 ft/sec sink rate was planned, the plane was yawed and rolled 13 deg. at initial (left-wing) impact. The first fuselage impact occurred near the nose wheel well with the nose pitched down 2.5 deg. Peak normal (vertical) floor accelerations were highest in the cockpit and forward cabin near the nose wheel well and were approximately 14G. The remaining cabin floor received normal acceleration peaks of 7G or less. The peak longitudinal floor accelerations showed a similar distribution, with the highest (7G) in the cockpit and forward cabin, decreasing to 4G or less toward the rear. Peak transverse floor accelerations ranged from about 5G in the cockpit to 1G in the aft fuselage.

Fokker-Planck-Based Acceleration for SN Equations with Highly Forward Peaked Scattering in Slab Geometry

NASA Astrophysics Data System (ADS)

Patel, Japan

Short mean free paths are characteristic of charged particles. High energy charged particles often have highly forward peaked scattering cross sections. Transport problems involving such charged particles are also highly optically thick. When problems simultaneously have forward peaked scattering and high optical thickness, their solution, using standard iterative methods, becomes very inefficient. In this dissertation, we explore Fokker-Planck-based acceleration for solving such problems.

Rotational Acceleration during Head Impact Resulting from Different Judo Throwing Techniques

PubMed Central

MURAYAMA, Haruo; HITOSUGI, Masahito; MOTOZAWA, Yasuki; OGINO, Masahiro; KOYAMA, Katsuhiro

2014-01-01

Most severe head injuries in judo are reported as acute subdural hematoma. It is thus necessary to examine the rotational acceleration of the head to clarify the mechanism of head injuries. We determined the rotational acceleration of the head when the subject is thrown by judo techniques. One Japanese male judo expert threw an anthropomorphic test device using two throwing techniques, Osoto-gari and Ouchigari. Rotational and translational head accelerations were measured with and without an under-mat. For Osoto-gari, peak resultant rotational acceleration ranged from 4,284.2 rad/s2 to 5,525.9 rad/s2 and peak resultant translational acceleration ranged from 64.3 g to 87.2 g; for Ouchi-gari, the accelerations respectively ranged from 1,708.0 rad/s2 to 2,104.1 rad/s2 and from 120.2 g to 149.4 g. The resultant rotational acceleration did not decrease with installation of an under-mat for both Ouchi-gari and Osoto-gari. We found that head contact with the tatami could result in the peak values of translational and rotational accelerations, respectively. In general, because kinematics of the body strongly affects translational and rotational accelerations of the head, both accelerations should be measured to analyze the underlying mechanism of head injury. As a primary preventative measure, throwing techniques should be restricted to participants demonstrating ability in ukemi techniques to avoid head contact with the tatami. PMID:24477065

Rotational acceleration during head impact resulting from different judo throwing techniques.

PubMed

Murayama, Haruo; Hitosugi, Masahito; Motozawa, Yasuki; Ogino, Masahiro; Koyama, Katsuhiro

2014-01-01

Most severe head injuries in judo are reported as acute subdural hematoma. It is thus necessary to examine the rotational acceleration of the head to clarify the mechanism of head injuries. We determined the rotational acceleration of the head when the subject is thrown by judo techniques. One Japanese male judo expert threw an anthropomorphic test device using two throwing techniques, Osoto-gari and Ouchi-gari. Rotational and translational head accelerations were measured with and without an under-mat. For Osoto-gari, peak resultant rotational acceleration ranged from 4,284.2 rad/s(2) to 5,525.9 rad/s(2) and peak resultant translational acceleration ranged from 64.3 g to 87.2 g; for Ouchi-gari, the accelerations respectively ranged from 1,708.0 rad/s(2) to 2,104.1 rad/s(2) and from 120.2 g to 149.4 g. The resultant rotational acceleration did not decrease with installation of an under-mat for both Ouchi-gari and Osoto-gari. We found that head contact with the tatami could result in the peak values of translational and rotational accelerations, respectively. In general, because kinematics of the body strongly affects translational and rotational accelerations of the head, both accelerations should be measured to analyze the underlying mechanism of head injury. As a primary preventative measure, throwing techniques should be restricted to participants demonstrating ability in ukemi techniques to avoid head contact with the tatami.

Near-infrared light-mediated photodynamic/photothermal therapy nanoplatform by the assembly of Fe3O4 carbon dots with graphitic black phosphorus quantum dots

PubMed Central

Zhang, Ming; Wang, Wentao; Cui, Yingjun; Zhou, Ninglin; Shen, Jian

2018-01-01

Background Recently, combined photodynamic therapy (PDT) and photothermal therapy (PTT) has become a desired treatment for cancer. However, the development of economic, high-efficiency, and safe photosensitizers/photothermal agents remains a significant challenge. Methods A novel nanocomposite has been developed via the assembly of iron oxide carbon dot (Fe3O4-CDs) nanoparticles and black phosphorus quantum dots (genipin [GP]-polyglutamic acid [PGA]-Fe3O4-CDs@BPQDs), and this nanocomposite shows a broad light-absorption band and a photodegradable character. Results In vitro and in vivo assays indicated that GP-PGA-Fe3O4-CDs@BPQDs were highly biocompatible and exhibited excellent tumor-inhibition efficacy, due to the synergistic PTT and PDT via a near-infrared laser. Importantly, in vivo tumor magnetic resonance imaging (MRI) results illustrated that GP-PGA-Fe3O4-CDs@BPQDs can be specifically applied for enhanced T2 MRI of tumors. This work presents the first combined application of a PDT and PTT effect deriving from BPQDs and MRI from Fe3O4-CDs, which may promote utilization of black BPQDs in biomedicine. Conclusion As expected, GP-PGA-Fe3O4-CDs@BPQDs displayed a dramatically enhanced ability to destroy tumor cells, due to the synergistic combination of PTT and PDT. PMID:29785107

Biomonitoring of styrene occupational exposures: Biomarkers and determinants.

PubMed

Persoons, Renaud; Richard, Justine; Herve, Claire; Montlevier, Sarah; Marques, Marie; Maitre, Anne

2018-06-22

High styrene exposures are still experienced in various occupational settings, requesting regular exposure assessments. The aims of this study were to study occupational exposures in various industrial sectors and to determine factors influencing styrene urinary metabolites levels. Biomonitoring was conducted in 141 workers from fiberglass-reinforced plastic (FRP) manufacture, thermoplastic polymers production, vehicle repair shops and cured-in-place pipe lining (CIPP). Urinary styrene (StyU) as well as Mandelic (MA) / Phenyglyoxylic Acids (PGA) were quantified at the beginning and at the end of week, and multivariate linear regression models were used. StyU levels revealed very low, rarely exceeding 3 µg.L -1 . Highest concentrations of MA + PGA were observed in FRP sector, with levels reaching up to 1100 mg.g -1 of creatinine. Factors influencing end-of-week MA + PGA concentrations were levels at the beginning of week, open molding processes, proximity to the emission source, respiratory protection, styrene content in raw materials. Elevated levels were also observed during CIPP process, whereas thermoplastic injection and vehicle repair shop workers exhibited much lower exposures. Intervention on process (decreasing styrene proportion, using closed molding), protective equipment (local exhaust ventilation, respiratory protection) and individual practices (stringent safety rules) are expected to decrease occupational exposures. Urinary MA + PGA remain the most appropriate biomarkers for occupational biomonitoring. Copyright © 2018. Published by Elsevier B.V.

Potential use of sugar binding proteins in reactors for regeneration of CO2 fixation acceptor D-Ribulose-1,5-bisphosphate

PubMed Central

Mahato, Sourav; De, Debojyoti; Dutta, Debajyoti; Kundu, Moloy; Bhattacharya, Sumana; Schiavone, Marc T; Bhattacharya, Sanjoy K

2004-01-01

Sugar binding proteins and binders of intermediate sugar metabolites derived from microbes are increasingly being used as reagents in new and expanding areas of biotechnology. The fixation of carbon dioxide at emission source has recently emerged as a technology with potentially significant implications for environmental biotechnology. Carbon dioxide is fixed onto a five carbon sugar D-ribulose-1,5-bisphosphate. We present a review of enzymatic and non-enzymatic binding proteins, for 3-phosphoglycerate (3PGA), 3-phosphoglyceraldehyde (3PGAL), dihydroxyacetone phosphate (DHAP), xylulose-5-phosphate (X5P) and ribulose-1,5-bisphosphate (RuBP) which could be potentially used in reactors regenerating RuBP from 3PGA. A series of reactors combined in a linear fashion has been previously shown to convert 3-PGA, (the product of fixed CO2 on RuBP as starting material) into RuBP (Bhattacharya et al., 2004; Bhattacharya, 2001). This was the basis for designing reactors harboring enzyme complexes/mixtures instead of linear combination of single-enzyme reactors for conversion of 3PGA into RuBP. Specific sugars in such enzyme-complex harboring reactors requires removal at key steps and fed to different reactors necessitating reversible sugar binders. In this review we present an account of existing microbial sugar binding proteins and their potential utility in these operations. PMID:15175111

A new biocatalyst: Penicillin G acylase immobilized in sol-gel micro-particles with magnetic properties.

PubMed

Bernardino, Susana M S A; Fernandes, Pedro; Fonseca, Luís P

2009-05-01

The present work focuses on the development and basic characterization of a new magnetic biocatalyst, namely penicillin G acylase (PGA), immobilized in sol-gel matrices with magnetic properties, ultimately aimed for application in cephalexin (CEX) synthesis. A mechanically stable carrier, based on porous xerogels silica matrixes starting from tetramethoxysilane (TMOS), was prepared leading to micro-carriers with medium sized particles of 30 microm, as determined by scanning electron microscopy. An immobilization yield of 95-100% and a recovered activity of 50-65% at 37 degrees C, as determined by penicillin G (PG) hydrolysis (pH STAT method), were observed. These results clearly exceed those reported in a previous work on PGA immobilization in sol-gel, where only 10% of activity was recovered. The values of activity were kept constant for 6 months. Immobilized PGA (682 U/g(dry weight)) retained high specific activity throughout ten consecutive runs for PG hydrolysis, suggesting adequate biocatalyst stability. The CEX synthesis was performed at 14 degrees C, using the free and immobilized PGA in aqueous medium. Phenylglycine methyl ester was used as acyl donor at 90 mM and 7-aminodeacetoxycephalosporanic acid was the limiting substrate at 30 mM. The CEX stoichiometric yield after 1-h reaction was close to 68% (23 mM CEX/h) and 65% (19 mM CEX/h), respectively.

Whole-Genome Sequencing and Comparative Genome Analysis of Bacillus subtilis Strains Isolated from Non-Salted Fermented Soybean Foods.

PubMed

Kamada, Mayumi; Hase, Sumitaka; Fujii, Kazushi; Miyake, Masato; Sato, Kengo; Kimura, Keitarou; Sakakibara, Yasubumi

2015-01-01

Bacillus subtilis is the main component in the fermentation of soybeans. To investigate the genetics of the soybean-fermenting B. subtilis strains and its relationship with the productivity of extracellular poly-γ-glutamic acid (γPGA), we sequenced the whole genome of eight B. subtilis stains isolated from non-salted fermented soybean foods in Southeast Asia. Assembled nucleotide sequences were compared with those of a natto (fermented soybean food) starter strain B. subtilis BEST195 and the laboratory standard strain B. subtilis 168 that is incapable of γPGA production. Detected variants were investigated in terms of insertion sequences, biotin synthesis, production of subtilisin NAT, and regulatory genes for γPGA synthesis, which were related to fermentation process. Comparing genome sequences, we found that the strains that produce γPGA have a deletion in a protein that constitutes the flagellar basal body, and this deletion was not found in the non-producing strains. We further identified diversity in variants of the bio operon, which is responsible for the biotin auxotrophism of the natto starter strains. Phylogenetic analysis using multilocus sequencing typing revealed that the B. subtilis strains isolated from the non-salted fermented soybeans were not clustered together, while the natto-fermenting strains were tightly clustered; this analysis also suggested that the strain isolated from "Tua Nao" of Thailand traces a different evolutionary process from other strains.

Strain screening, fermentation, separation, and encapsulation for production of nattokinase functional food.

PubMed

Wei, Xuetuan; Luo, Mingfang; Xie, Yuchun; Yang, Liangrong; Li, Haojian; Xu, Lin; Liu, Huizhou

2012-12-01

This study presents a novel and integrated preparation technology for nattokinase functional food, including strain screening, fermentation, separation, and encapsulation. To rapidly screen a nattokinase-productive strain, PCR-based screening method was combined with fibrinolytic activity-based method, and a high productive strain, Bacillus subtilis LSSE-22, was isolated from Chinese soybean paste. Reduction of poly-γ-glutamic acid (γ-PGA) concentration may contribute to separation of nattokinase and reduction of late-onset anaphylaxis risk. Chickpeas were confirmed as the favorable substrate for enhancement of nattokinase production and reduction of γ-PGA yield. Using cracked chickpeas, the nattokinase activity reached 356.25 ± 17.18 FU/g (dry weight), which is much higher than previous reports. To further reduce γ-PGA concentration, ethanol fractional extraction and precipitation were applied for separation of nattokinase. By extraction with 50 % and precipitation with 75 % ethanol solution, 4,000.58 ± 192.98 FU/g of nattokinase powders were obtained, and the activity recovery reached 89 ± 1 %, while γ-PGA recovery was reduced to 21 ± 2 %. To improve the nattokinase stability at acidic pH condition, the nattokinase powders were encapsulated, and then coated with methacrylic acid-ethyl acrylate copolymer. After encapsulation, the nattokinase was protected from being denatured under various acid conditions, and pH-responsible controlled release at simulated intestinal fluid was realized.

Polyglycolic acid-hyaluronan scaffolds loaded with bone marrow-derived mesenchymal stem cells show chondrogenic differentiation in vitro and cartilage repair in the rabbit model.

PubMed

Patrascu, Jenel M; Krüger, Jan Philipp; Böss, Hademar G; Ketzmar, Anna-Katharina; Freymann, Undine; Sittinger, Michael; Notter, Michael; Endres, Michaela; Kaps, Christian

2013-10-01

In cartilage repair, scaffold-assisted one-step approaches are used to improve the microfracture (Mfx) technique. Since the number of progenitors in Mfx is low and may further decrease with age, aim of our study was to analyze the chondrogenic potential of freeze-dried polyglycolic acid-hyaluronan (PGA-HA) implants preloaded with mesenchymal stem cells (MSCs) in vitro and in a rabbit articular cartilage defect model. Human bone marrow-derived MSC from iliac crest were cultured in freeze-dried PGA-HA implants for chondrogenic differentiation. In a pilot study, implants were loaded with autologous rabbit MSC and used to cover 5 mm × 6 mm full-thickness femoral articular cartilage defects (n = 4). Untreated defects (n = 3) served as controls. Gene expression analysis and histology showed induction of typical chondrogenic marker genes like type II collagen and formation of hyaline-like cartilaginous tissue in MSC-laden PGA-HA implants. Histological evaluation of rabbit repair tissue formation after 30 and 45 days showed formation of repair tissue, rich in chondrocytic cells and of a hyaline-like appearance. Controls showed no articular resurfacing, tissue repair in the subchondral zone and fibrin formation. These results suggest that MSC-laden PGA-HA scaffolds have chondrogenic potential and are a promising option for stem cell-mediated cartilage regeneration. Copyright © 2013 Wiley Periodicals, Inc.

Clinical evaluations of complete autologous fibrin glue, produced by the CryoSeal® FS system, and polyglycolic acid sheets as wound coverings after oral surgery.

PubMed

Kouketsu, Atsumu; Nogami, Shinnosuke; Yamada-Fujiwara, Minami; Nagai, Hirokazu; Yamauchi, Kensuke; Mori, Shiro; Miyashita, Hitoshi; Kawai, Tadashi; Matsui, Aritsune; Kataoka, Yoshihiro; Satomi, Norihisa; Ezoe, Yushi; Abe, Satoko; Takeda, Yuri; Tone, Takeshi; Hirayama, Bunnichi; Kurobane, Tsuyoshi; Tashiro, Kazuki; Yanagisawa, Yuta; Takahashi, Tetsu

2017-09-01

The CryoSeal ® FS System has been recently introduced as an automated device for the production of complete fibrin glue from autologous plasma, rather than from pool allogenic or cattle blood, to prevent viral infection and allergic reaction. We evaluated the effectiveness of complete autologous fibrin glue and polyglycolic acid (PGA) sheet wound coverings in mucosa defect oral surgery. Postoperative pain, scar contracture, ingestion, tongue dyskinesia, and postoperative bleeding were evaluated in 12 patients who underwent oral (including the tongue) mucosa excision, and received a PGA sheet and an autologous fibrin glue covering. They were compared with 12 patients who received a PGA sheet and commercial allogenic fibrin glue. All cases in the complete autologous fibrin glue group demonstrated good wound healing without complications such as local infection or incomplete cure. All evaluated clinical measures in this group were similar or superior to the commercial allogenic fibrin glue group. Coagulation and adhesion quality achieved with this method was comparable to that with a PGA sheet and commercial fibrin glue. Covering oral surgery wounds with complete autologous fibrin glue produced by an automated device was convenient, safe, and reduced the risk of viral infection and allergic reaction associated with conventional techniques. Copyright © 2017 European Association for Cranio-Maxillo-Facial Surgery. Published by Elsevier Ltd. All rights reserved.

Discrete Element Method Simulation of a Boulder Extraction From an Asteroid

NASA Technical Reports Server (NTRS)

Kulchitsky, Anton K.; Johnson, Jerome B.; Reeves, David M.; Wilkinson, Allen

2014-01-01

The force required to pull 7t and 40t polyhedral boulders from the surface of an asteroid is simulated using the discrete element method considering the effects of microgravity, regolith cohesion and boulder acceleration. The connection between particle surface energy and regolith cohesion is estimated by simulating a cohesion sample tearing test. An optimal constant acceleration is found where the peak net force from inertia and cohesion is a minimum. Peak pulling forces can be further reduced by using linear and quadratic acceleration functions with up to a 40% reduction in force for quadratic acceleration.

The deadly Morelos-Puebla, Mexico Intraslab Earthquake of 19 September 2017 (Mw7.1): Was the Earthquake Unexpected and Were the Ground Motions and Damage Pattern in Mexico City Abnormal?

NASA Astrophysics Data System (ADS)

Perez-Campos, X.; Singh, S. K.; Arroyo, D.; Cruz-Atienza, V. M.; Ordaz, M.; Hjorleifsdottir, V.; Iglesias, A.

2017-12-01

On 19 September 2017, thirty two years after the 1985 Michoacan interplate earthquake (Mw8.0), the city was once again devastated but this time by a Mw7.1 intraslab earthquake. The 2017 earthquake was located near the border of the states of Morelos and Puebla (18.410N, -98.710E; H=57 km), to SSE of Mexico City, at a hypocentral distance of about 127 km. It caused great panic in Mexico City, collapse of 44 buildings, and severely damaged many others. More than 200 persons were killed in the city. It was the second most destructive earthquake in the history of Mexico City, next only to the 1985 earthquake. A strong-motion station at CU located on basalt lava flows on main campus UNAM has been in continuous operation since 1964. PGA of 59 gal at CU during the 2017 earthquake is the largest ever, two times greater than that recorded during the 1985 earthquake (29 gal). The 2017 earthquake raised questions that are critical in fathoming the seismic vulnerability of the city and in its reconstruction. Was such an intraslab earthquake (Mw 7 at a hypocentral distance of 127 km) unexpected? Were the recorded ground motions in the city unusually high for such an earthquake? Why did the damage pattern during the earthquake differ from that observed during the 1985 earthquake? The earthquake was the closest M>5 intraslab earthquake to Mexico City ever recorded. However, Mw 5.9 events have occurred in recent years in the vicinity of the 2017 earthquake (R 145 km). Three Mw≥6.9 earthquakes have occurred since 1964 in the distance range 184-225 km. Thus, Mw and R of the earthquake was not surprising. However, a comparison of Fourier acceleration spectra at CU of 10 intraslab earthquakes with largest PGA, reduced to a common distance of R=127 km, shows that the amplitudes of the 2017 events were abnormally high in 1-2s range. Spectra of intraslab events at CU are enriched at higher frequencies relative to interplate ones because of closer distance, greater depth and higher stress drop. It follows that, for this earthquake, the sites in the city with 1-2s natural period (the transition zone) would be especially vulnerable. Observed damage in the city closely follows this pattern: peak in the response spectra occurs between 1 and 2 s and coincides with sites which have 1 to 2 s natural period and zone of collapsed buildings.

Calculating the radiation characteristics of accelerated electrons in laser-plasma interactions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, X. F.; Graduate School of Engineering, Utsunomiya University, 7-1-2 Yohtoh, Utsunomiya 321-8585; Yu, Q.

2016-03-15

In this paper, we studied the characteristics of radiation emitted by electrons accelerated in a laser–plasma interaction by using the Lienard–Wiechert field. In the interaction of a laser pulse with a underdense plasma, electrons are accelerated by two mechanisms: direct laser acceleration (DLA) and laser wakefield acceleration (LWFA). At the beginning of the process, the DLA electrons emit most of the radiation, and the DLA electrons emit a much higher peak photon energy than the LWFA electrons. As the laser–plasma interaction progresses, the LWFA electrons become the major radiation emitter; however, even at this stage, the contribution from DLA electronsmore » is significant, especially to the peak photon energy.« less

Effect of 3 Weeks Use of Compression Garments on Stride and Impact Shock during a Fatiguing Run.

PubMed

Lucas-Cuevas, A G; Priego-Quesada, J I; Aparicio, I; Giménez, J V; Llana-Belloch, S; Pérez-Soriano, P

2015-10-01

Excessive and prolonged exposure to impact acceleration during running is associated with increased injury rate. Acute use of compressive garments has been speculated to improve attenuation. However, it is unknown how longer interventions of compressive garments influence attenuation in running. 40 runners trained with compressive and placebo stockings for 3 weeks. Perception of comfort, stride parameters (rate, length) and impact acceleration (head and tibial peak acceleration, magnitude, acceleration rate and attenuation) were measured every 5 min during a fatigue run (30 min at 80% of the individual's maximal aerobic speed). Compressive stockings reduced tibial peak acceleration and magnitude compared to placebo stockings at every minute (p<0.05) except for the initial measurement (p>0.05). Moreover, compressive stockings led to a lower rate of increase in tibial peak acceleration (14%, p<0.005) and magnitude (16%, p<0.001) as a result of the development of fatigue compared to placebo stockings (24% and 26% increase, p=0.014 and p=0.003, respectively). Similar perception of comfort was reported for both garments. Training with compressive stockings for 3 weeks reduced impact acceleration and the rate of increase in acceleration compared to placebo stockings. These findings suggest that compressive stockings may play a protective role by reducing impact accelerations during running. © Georg Thieme Verlag KG Stuttgart · New York.

Thrombus organization and healing in an experimental aneurysm model. Part II. The effect of various types of bioactive bioabsorbable polymeric coils.

PubMed

Yuki, Ichiro; Lee, Daniel; Murayama, Yuichi; Chiang, Alexander; Vinters, Harry V; Nismmura, Ichiro; Wang, Chiachien J; Ishii, Akira; Wu, Benjamin M; Viñuela, Fernando

2007-07-01

Bioabsorbable polymeric material coils are being used in the endovascular treatment of aneurysms to achieve better thrombus organization than is possible using bare platinum coils. We used immunohistochemical and molecular biological analysis techniques in experimental aneurysms implanted with three different bioabsorbable polymer coils and platinum coils. The degradation kinetics of nine polymer candidates for further analysis were first analyzed in vitro, and three materials with different degradation rates were selected. Seventy-four aneurysms were created in 37 swine using the venous pouch technique. The aneurysms were surgically implanted with one of the materials as follows (time points = 3, 7, and 14 days): Group 1, Guglielmi detachable coils (platinum); Group 2, Polysorb (90:10 polyglycolic acid [PGA]/polylactic acid); Group 3, Maxon (PGA/trimethylene carbonate); and Group 4, poly-l-lactic acid. Histological, immunohistochemical, and cDNA microarray analyses were performed on tissue specimens. Groups 1 and 4 showed minimal inflammatory response adjacent to the coil mass. In Group 2, Polysorb elicited a unique, firm granulation tissue that accelerated intraaneurysmal thrombus organization. In Group 3 intermediate inflammatory reactions were seen. Microarray analysis with Expression Analysis Sytematic Explorer software showed functional-cluster-gene activation to be increased at Day 7, preceding the histologic manifestation of polymer-induced granulation tissue at Day 14. A profile of expression changes in cytokine-related and extracellular membrane-related genes was compiled. Degradation speed was not the only factor determining the strength of the biological response. Polysorb induced an early, unique granulation tissue that conferred greater mechanical strength to the intraaneurysmal coilthrombus complex. Enhancing the formation of this polymer-induced granulation tissue may provide a new direction for improving long-term anatomical outcomes in cases involving aneurysms embolized with detachable coils.

Fecal Calprotectin Is Not Affected by Pregnancy: Clinical Implications for the Management of Pregnant Patients with Inflammatory Bowel Disease.

PubMed

Julsgaard, Mette; Hvas, Christian L; Gearry, Richard B; Vestergaard, Thea; Fallingborg, Jan; Svenningsen, Lise; Kjeldsen, Jens; Sparrow, Miles P; Wildt, Signe; Kelsen, Jens; Bell, Sally J

2017-07-01

Noninvasive biomarkers of inflammation for monitoring inflammatory bowel disease (IBD) are important in pregnancy. Clinical and laboratory markers are often affected by the physiological adaption that occurs during pregnancy, although, few, if any, data exist on fecal calprotectin (FC). We investigated FC concentrations in pregnant controls and IBD women, and whether FC correlated with physician global assessment (PGA), C-reactive protein (CRP), and Harvey-Bradshaw Index (HBI)/Simple Clinical Colitis Activity Index (SCCAI) before and after pregnancy, as well as during each trimester. The study is a prospective multicenter study of 46 pregnant women with and 21 without IBD in Denmark, Australia, and New Zealand. Demographics, clinical parameters, and HBI/SCCAI were recorded. Stool and blood samples were obtained to determine FC and CRP concentrations. From pregnant IBD women and pregnant controls, 174 and 21 fecal samples were collected, respectively. The median FC concentration in pregnant IBD women was 131 μg/g (range 0-3600) and in controls 0 μg/g (range 0-84) (P < 0.0001). FC strongly correlated with PGA at all 5 timepoints (r ≥ 0.80; P < 0.0001) and with HBI/SCCAI before (r = 0.66; P < 0.0001) and after pregnancy (r = 0.47; P < 0.003) but not during pregnancy (P > 0.05). An FC cutoff concentration of 250 μg/g significantly correlated with active disease according to PGA in all 5 periods (P ≤ 0.0002). CRP only significantly correlated with FC (P = 0.0007) and PGA in the second trimester (P = 0.0003). No significant correlation was found between CRP and HBI/SCCAI at any timepoint (P > 0.05). The physiological changes that occur during pregnancy do not affect FC, in contrast to CRP and HBI/SCCAI. The combined use of FC and PGA seems optimal to assess disease activity in IBD during pregnancy.

6SLN-lipo PGA specifically catches (coats) human influenza virus and synergizes neuraminidase-targeting drugs for human influenza therapeutic potential.

PubMed

Sriwilaijaroen, Nongluk; Suzuki, Katsuhiko; Takashita, Emi; Hiramatsu, Hiroaki; Kanie, Osamu; Suzuki, Yasuo

2015-10-01

The purpose of this study was to develop a new compound to overcome influenza epidemics and pandemics as well as drug resistance. We synthesized a new compound carrying: (i) Neu5Acα2-6Galβ1-4GlcNAc (6SLN) for targeting immutable haemagglutinins (HAs) unless switched from human-type receptor preference; (ii) an acyl chain (lipo) for locking the compound with the viral HA via hydrophobic interactions; and (iii) a flexible poly-α-L-glutamic acid (PGA) for enhancing the compound solubility and for coating the viral surface, precluding accessibility of the PGA-coated virus to the negatively charged sialic acid on the host cell surface. 6SLN-lipo PGA appears to subvert binding of pandemic H1 and seasonal H3 HAs to receptors, as assessed by using guinea pig erythrocytes, which is critical for virus entry into host cells for multiplication. It shows high potency with IC50 values in the range of 300-500 nM against multiplication of both influenza pandemic H1N1/2009 and seasonal H3N2/2004 viruses in cell culture. It acts in synergism with either of the two FDA-approved neuraminidase inhibitor (NAI) clinical drugs, zanamivir (Relenza(®)) and oseltamivir carboxylate (active form of Tamiflu(®)), and it has the potential to aid NAI drugs to achieve complete clearance of the virus from the culture. 6SLN-lipo PGA is a new potential candidate drug for influenza control and is an attractive candidate for use in combination with an NAI drug for minimized toxicity, delayed development of resistance, prevention and treatment with the potential for eradication of human influenza. © The Author 2015. Published by Oxford University Press on behalf of the British Society for Antimicrobial Chemotherapy. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

Measurement Properties of the Psoriasis Symptom Inventory Electronic Daily Diary in Patients with Moderate to Severe Plaque Psoriasis.

PubMed

Viswanathan, Hema N; Mutebi, Alex; Milmont, Cassandra E; Gordon, Kenneth; Wilson, Hilary; Zhang, Hao; Klekotka, Paul A; Revicki, Dennis A; Augustin, Matthias; Kricorian, Gregory; Nirula, Ajay; Strober, Bruce

2017-09-01

The Psoriasis Symptom Inventory (PSI) is a patient-reported outcome instrument that measures the severity of psoriasis signs and symptoms. This study evaluated measurement properties of the PSI in patients with moderate to severe plaque psoriasis. This secondary analysis used pooled data from a phase 3 brodalumab clinical trial (AMAGINE-1). Outcome measures included the PSI, Psoriasis Area and Severity Index (PASI), static Physician's Global Assessment (sPGA), psoriasis-affected body surface area, 36-item Short-Form Health Survey version 2, and the Dermatology Life Quality Index (DLQI). The PSI was evaluated for dimensionality, item performance, reliability (internal consistency and test-retest), construct validity, ability to detect change, and agreement between PSI response and response measures based on the PASI, sPGA, and DLQI. Results supported unidimensionality, good item fit, ordered responses, and PSI scoring. The PSI demonstrated reliability: baseline Cronbach's alpha ≥ 0.92 and intraclass correlation coefficients ≥ 0.95. Correlations between PSI total score and DLQI item 1 (r = 0.86), DLQI symptoms and feelings (r = 0.87), and 36-item Short-Form Health Survey version 2 bodily pain (r = -0.61) supported convergent validity. PSI scores differed significantly (P < 0.001) among severity groups based on the PASI (< 12/≥ 12), sPGA (0-1/2-3/4-5), body surface area (< 5%/5%-10%/> 10%), and DLQI (≤ 5/> 5) at weeks 8 and 12. At week 12, the PSI detected significant changes in severity based on PASI responses (< 50/50- < 75/≥ 75) and sPGA (0-1/≥ 2), and showed good agreement (k ≥ 0.66) between PSI response and PASI, sPGA, and DLQI responses. The PSI demonstrated excellent validity, reliability, and ability to detect change in the severity of psoriasis signs and symptoms. Copyright © 2017 International Society for Pharmacoeconomics and Outcomes Research (ISPOR). Published by Elsevier Inc. All rights reserved.

Erythrocyte-bound C4d in combination with complement and autoantibody status for the monitoring of SLE.

PubMed

Merrill, Joan T; Petri, Michelle A; Buyon, Jill; Ramsey-Goldman, Rosalind; Kalunian, Kenneth; Putterman, Chaim; Conklin, John; Furie, Richard A; Dervieux, Thierry

2018-01-01

We examined the usefulness of erythrocyte-bound C4d (EC4d) to monitor disease activity in SLE. Data and blood samples were collected from three different studies, each of which included longitudinal evaluations using the Physicians Global Assessment (PGA) of disease activity and the Safety of Estrogens in Lupus Erythematosus National Assessment (SELENA) SLE Disease Activity Index (SLEDAI), which was assessed without anti-double-stranded DNA (dsDNA) and low complement C3/C4 (clinical SELENA-SLEDAI). EC4d levels were determined using flow cytometry; other laboratory measures included antibodies to dsDNA, C3 and C4 proteins. Relationships between clinical SELENA-SLEDAI, PGA and the laboratory measures were analysed using linear mixed effect models. The three studies combined enrolled 124 patients with SLE (mean age 42 years, 97% women, 31% Caucasians and 34% African-Americans) followed for an average of 5 consecutive visits (range 2-13 visits). EC4d levels and low C3/C4 status were significantly associated the clinical SELENA-SLEDAI or PGA in each of the three study groups (p<0.05). Multivariate analysis revealed that EC4d levels (estimate=0.94±0.28) and low complement C3/C4 (estimate=1.24±0.43) were both independently and significantly associated with the clinical SELENA-SLEDAI (p<0.01) and PGA. EC4d levels were also associated with the clinical SELENA-SLEDAI (estimate: 1.20±0.29) and PGA (estimate=0.19±0.04) among patients with chronically low or normal C3/C4 (p<0.01). Anti-dsDNA titres were generally associated with disease activity. These data support the association of EC4d with disease activity regardless of complement C3/C4 status and its usefulness in monitoring SLE disease. Additional studies will be required to support these validation data.

In situ one-pot preparation of superparamagnetic hydrophilic porous microspheres for covalently immobilizing penicillin G acylase to synthesize amoxicillin

NASA Astrophysics Data System (ADS)

Xue, Ping; Gu, Yaohua; Su, Weiguang; Shuai, Huihui; Wang, Julan

2016-01-01

Magnetic hydrophilic porous microspheres were successfully one-pot synthesized for the first time via in situ inverse suspension polymerization of glycidyl methacrylate, N,N‧-methylene bisacrylamide and 2-hydroxyethyl methacrylate in the presence of Fe3+ and Fe2+ dispersed in formamide, which were denoted as magnetic Fe3O4-GMH microspheres. The morphology and properties of magnetic Fe3O4-GMH microspheres were characterized by SEM, VSM, XRD, FTIR, and so on. The formamide content had an important influence on the morphology of Fe3O4-GMH, and nearly perfectly spherical Fe3O4-GMH particles were formed when the amount of formamide was 15 ml. The diameters of the microspheres were in the range of 100-200 μm and Fe3O4-GMH exhibited superparamagnetic behavior with the saturation magnetization of 5.44 emu/g. The specific surface area of microspheres was 138.7 m2/g, the average pore diameter and pore volume were 15.1 nm and 0.60 cm3/g, respectively. The content of oxirane groups on Fe3O4-GMH was 0.40 mmol/g. After penicillin G acylase (PGA) was covalently immobilized on Fe3O4-GMH microspheres, the catalytic performance for amoxicillin synthesis by 6-aminopenicillanic acid and D-hydroxyphenylglycine methyl ester was largely improved. As a result, 90.1% amoxicillin yield and 1.18 of the synthesis/hydrolysis (S/H) ratio were achieved on PGA/Fe3O4-GMH with ethylene glycol as solvent, but only 62.6% amoxicillin yield and 0.37 of the S/H ratio were obtained on free PGA under the same reaction conditions. Furthermore, the amoxicillin yield and S/H ratio were still kept at 88.2% and 1.06, respectively after the immobilized PGA was magnetically separated and recycled for 10 times, indicating that PGA/Fe3O4-GMH had a very good reusability.

Characterization of Vertical Impact Device Acceleration Pulses Using Parametric Assessment: Phase 3 Wiaman Seat

DTIC Science & Technology

2016-07-01

711 HPW/RHCPT) and their in-house technical support contractor , Infoscitex, conducted a series of tests to identify the performance capabilities of...Cell Seat Configuration Drop Ht . (in) Mean Peak Acceleration (G) Mean Velocity Change (ft/s) SH1 WS1 20 80.08 ± 3.71 13.54 ± 0.49 SH2...6. Test Matrix for VID Response with WS2 Test Cell Seat (Felt) Configuration Drop Ht . (in) Mean Peak Acceleration (G

Mobile Romberg test assessment (mRomberg).

PubMed

Galán-Mercant, Alejandro; Cuesta-Vargas, Antonio I

2014-09-12

The diagnosis of frailty is based on physical impairments and clinicians have indicated that early detection is one of the most effective methods for reducing the severity of physical frailty. Maybe, an alternative to the classical diagnosis could be the instrumentalization of classical functional testing, as Romberg test or Timed Get Up and Go Test. The aim of this study was (I) to measure and describe the magnitude of accelerometry values in the Romberg test in two groups of frail and non-frail elderly people through instrumentation with the iPhone 4®, (II) to analyse the performances and differences between the study groups, and (III) to analyse the performances and differences within study groups to characterise accelerometer responses to increasingly difficult challenges to balance. This is a cross-sectional study of 18 subjects over 70 years old, 9 frail subjects and 9 non-frail subjects. The non-parametric Mann-Whitney U test was used for between-group comparisons in means values derived from different tasks. The Wilcoxon Signed-Rank test was used to analyse differences between different variants of the test in both independent study groups. The highest difference between groups was found in the accelerometer values with eyes closed and feet parallel: maximum peak acceleration in the lateral axis (p < 0.01), minimum peak acceleration in the lateral axis (p < 0.01) and minimum peak acceleration from the resultant vector (p < 0.01). Subjects with eyes open and feet parallel, greatest differences found between the groups were in the maximum peak acceleration in the lateral axis (p < 0.01), minimum peak acceleration in the lateral axis (p < 0.01) and minimum peak acceleration from the resultant vector (p < 0.001). With eyes closed and feet in tandem, the greatest differences found between the groups were in the minimum peak acceleration in the lateral axis (p < 0.01). The accelerometer fitted in the iPhone 4® is able to study and analyse the kinematics of the Romberg test between frail and non-frail elderly people. In addition, the results indicate that the accelerometry values also were significantly different between the frail and non-frail groups, and that values from the accelerometer accelerometer increased as the test was made more complicated.

Constraints on Long-Term Seismic Hazard From Vulnerable Stalagmites for the surroundings of Katerloch cave, Austria

NASA Astrophysics Data System (ADS)

Gribovszki, Katalin; Bokelmann, Götz; Mónus, Péter; Kovács, Károly; Kalmár, János

2016-04-01

Earthquakes hit urban centers in Europe infrequently, but occasionally with disastrous effects. This raises the important issue for society, how to react to the natural hazard: potential damages are huge, and infrastructure costs for addressing these hazards are huge as well. Obtaining an unbiased view of seismic hazard (and risk) is very important therefore. In principle, the best way to test Probabilistic Seismic Hazard Assessments (PSHA) is to compare with observations that are entirely independent of the procedure used to produce the PSHA models. Arguably, the most valuable information in this context should be information on long-term hazard, namely maximum intensities (or magnitudes) occurring over time intervals that are at least as long as a seismic cycle. Such information would be very valuable, even if it concerned only a single site. Long-term information can in principle be gained from intact stalagmites in natural karstic caves. These have survived all earthquakes that have occurred, over thousands of years - depending on the age of the stalagmite. Their "survival" requires that the horizontal ground acceleration has never exceeded a certain critical value within that period. We are focusing here on a case study from the Katerloch cave close to the city of Graz, Austria. A specially-shaped (candle stick style: high, slim, and more or less cylindrical form) intact and vulnerable stalagmites (IVSTM) in the Katerloch cave has been examined in 2013 and 2014. This IVSTM is suitable for estimating the upper limit for horizontal peak ground acceleration generated by pre-historic earthquakes. For this cave, we have extensive information about ages (e.g., Boch et al., 2006, 2010). The approach, used in our study, yields significant new constraints on seismic hazard, as the intactness of the stalagmites suggests that tectonic structures close to Katerloch cave, i.p. the Mur-Mürz fault did not generate very strong paleoearthquakes in the last few thousand years. This study is particular important for understanding the seismic hazard associated with the town of Graz. The acceleration level determined by our study for the territory of Katerloch cave is much lower than the PGA value interval (from 0.075 g to 0.1 g, in case of arithmetic mean, 85% fragile, rock type) determined by probabilistic seismic hazard calculation (SHARE Model, e.g., Giardini et al., 2013,) for a 475 years recurrence time (in 50 years with 10% probability of exceedance).

On the Relationship between Fourier and Response Spectra: Implications for the Adjustment of Empirical Ground-Motion Prediction Equations (GMPEs)

NASA Astrophysics Data System (ADS)

Bora, Sanjay; Scherbaum, Frank; Kuehn, Nicolas; Stafford, Peter

2016-04-01

Often, scaling of response spectral amplitudes, (e.g., spectral acceleration) obtained from empirical ground motion prediction equations (GMPEs), with respect to commonly used seismological parameters such as magnitude, distance and site condition is assumed/referred to be representing a similar scaling of Fourier spectral amplitudes. For instance, the distance scaling of response spectral amplitudes is related with the geometrical spreading of seismic waves. Such comparison of scaling of response spectral amplitudes with that of corresponding Fourier spectral amplitudes is motivated by that, the functional forms of response spectral GMPEs are often derived using the concepts borrowed from Fourier spectral modeling of ground motion. As these GMPEs are subsequently calibrated with empirical observations, this may not appear to pose any major problems in the prediction of ground motion for a particular earthquake scenario. However, the assumption that the Fourier spectral concepts persist for response spectra can lead to undesirable consequences when it comes to the adjustment of response spectral GMPEs to represent conditions not covered in the original empirical data set. In this context, a couple of important questions arise, e.g., what are the distinctions and/or similarities between Fourier and response spectra of ground-motions? And, if they are different, then what is the mechanism responsible for such differences and how do adjustments that are made to FAS manifest in response spectra? We explore the relationship between the Fourier and response spectrum of ground motion by using random vibration theory (RVT). With a simple Brune (1970, 1971) source model, RVT-generated acceleration spectra for a fixed magnitude and distance scenario are used. The RVT analyses reveal that the scaling of low oscillator-frequency response spectral ordinates can be treated as being equivalent to the scaling of the corresponding Fourier spectral ordinates. However, the high oscillator-frequency response spectral ordinates are controlled by a rather wide-band of Fourier spectral ordinates. In fact, the peak ground acceleration (PGA), counter to the popular perception that it is a reflection of the high-frequency characteristics of ground motion, is controlled by the entire Fourier spectrum of ground-motion. Finally, it is demonstrated, how an adjustment made in Fourier spectral amplitudes is different or similar to the same adjustment made in the response spectral amplitudes. For this purpose, two cases: adjustments to the stress parameter (Δσ) (source term) and to attributes reflecting site response (V s-κ0) are considered.

Probabilistic Seismic Hazard Assessment of the Chiapas State (SE Mexico)

NASA Astrophysics Data System (ADS)

Rodríguez-Lomelí, Anabel Georgina; García-Mayordomo, Julián

2015-04-01

The Chiapas State, in southeastern Mexico, is a very active seismic region due to the interaction of three tectonic plates: Northamerica, Cocos and Caribe. We present a probabilistic seismic hazard assessment (PSHA) specifically performed to evaluate seismic hazard in the Chiapas state. The PSHA was based on a composited seismic catalogue homogenized to Mw and was used a logic tree procedure for the consideration of different seismogenic source models and ground motion prediction equations (GMPEs). The results were obtained in terms of peak ground acceleration as well as spectral accelerations. The earthquake catalogue was compiled from the International Seismological Center and the Servicio Sismológico Nacional de México sources. Two different seismogenic source zones (SSZ) models were devised based on a revision of the tectonics of the region and the available geomorphological and geological maps. The SSZ were finally defined by the analysis of geophysical data, resulting two main different SSZ models. The Gutenberg-Richter parameters for each SSZ were calculated from the declustered and homogenized catalogue, while the maximum expected earthquake was assessed from both the catalogue and geological criteria. Several worldwide and regional GMPEs for subduction and crustal zones were revised. For each SSZ model we considered four possible combinations of GMPEs. Finally, hazard was calculated in terms of PGA and SA for 500-, 1000-, and 2500-years return periods for each branch of the logic tree using the CRISIS2007 software. The final hazard maps represent the mean values obtained from the two seismogenic and four attenuation models considered in the logic tree. For the three return periods analyzed, the maps locate the most hazardous areas in the Chiapas Central Pacific Zone, the Pacific Coastal Plain and in the Motagua and Polochic Fault Zone; intermediate hazard values in the Chiapas Batholith Zone and in the Strike-Slip Faults Province. The hazard decreases towards the northeast across the Reverse Faults Province and up to Yucatan Platform, where the lowest values are reached. We also produced uniform hazard spectra (UHS) for the three main cities of Chiapas. Tapachula city presents the highest spectral accelerations, while Tuxtla Gutierrez and San Cristobal de las Casas cities show similar values. We conclude that seismic hazard in Chiapas is chiefly controlled by the subduction of the Cocos beneath Northamerica and Caribe tectonic plates, that makes the coastal areas the most hazardous. Additionally, the Motagua and Polochic Fault Zones are also important, increasing the hazard particularly in southeastern Chiapas.

How Well Does the Latest Anthropomorphic Test Device Mimic Human Impact Responses?

NASA Technical Reports Server (NTRS)

Newby, N.; Somers, J. T.; Caldwell, E.; Gernhardt, M.

2014-01-01

One of the goals of the NASA Occupant Protection Group is to understand the human tolerance to dynamic loading. This knowledge has to come through indirect approaches such as existing human response databases, anthropometric test devices (ATD), animal testing, post-mortem human subjects, and models. This study investigated the biofidelity of the National Highway Traffic Safety Administration's ATD named the THOR (test device for human occupant restraint). If THOR responds comparably to humans, then it could potentially be used as a human surrogate to help validate space vehicle requirements for occupant protection. The THOR responses to frontal and spinal impacts (ranging from 8 to 12 G with rise times of 40, 70, and 100 ms) were measured and compared to human volunteer responses (95 trials in frontal and 58 in spinal) previously collected by the U. S. Air Force on the same horizontal impact accelerator. The impact acceleration profiles tested are within the expected range of multi-purpose crew vehicle (MPCV) landing dynamics. A correlation score was calculated for each THOR to human comparison using CORA (CORrelation and Analysis) software. A two-parameter beta distribution model fit was obtained for each dependent variable using maximum likelihood estimation. For frontal impacts, the THOR head x-acceleration peak response correlated with the human response at 8 and 10-G 100 ms but not 10-G 70 ms. The phase lagged the human response. Head z-acceleration was not correlated. Chest x-acceleration was in phase, had a higher peak response, and was well correlated with lighter subjects (Cora = 0.8 for 46 kg vs. Cora = 0.4 for 126 kg). Head x-displacement had a leading phase. Several subjects responded with the same peak displacement but the mean of the group was lower. The shoulder x-displacement was in phase but had higher peaks than the human response. For spinal impacts, the THOR head x-acceleration was not well correlated. Head and chest z-acceleration was in phase but had a higher peak response. Chest z-acceleration was highly correlated with heavier subjects at lower G pulses (Cora = 0.86 for 125 kg at 8 G). The human response was variable in shoulder z-displacement but the THOR was in phase and was comparable to the mean peak response. Head xand z-displacement was in phase but had higher peaks. Seat pan forces were well correlated, were in phase, but had a larger peak response than most subjects. The THOR does not respond to frontal and spinal impacts exactly the same way that a human does. Some responses are well matched and others are not. Understanding the strengths and weaknesses of this ATD is an important first step in determining its usefulness in occupant protection at NASA

An analytical reconstruction model of the spread-out Bragg peak using laser-accelerated proton beams.

PubMed

Tao, Li; Zhu, Kun; Zhu, Jungao; Xu, Xiaohan; Lin, Chen; Ma, Wenjun; Lu, Haiyang; Zhao, Yanying; Lu, Yuanrong; Chen, Jia-Er; Yan, Xueqing

2017-07-07

With the development of laser technology, laser-driven proton acceleration provides a new method for proton tumor therapy. However, it has not been applied in practice because of the wide and decreasing energy spectrum of laser-accelerated proton beams. In this paper, we propose an analytical model to reconstruct the spread-out Bragg peak (SOBP) using laser-accelerated proton beams. Firstly, we present a modified weighting formula for protons of different energies. Secondly, a theoretical model for the reconstruction of SOBPs with laser-accelerated proton beams has been built. It can quickly calculate the number of laser shots needed for each energy interval of the laser-accelerated protons. Finally, we show the 2D reconstruction results of SOBPs for laser-accelerated proton beams and the ideal situation. The final results show that our analytical model can give an SOBP reconstruction scheme that can be used for actual tumor therapy.

A Cascaded Approach for Correcting Ionospheric Contamination with Large Amplitude in HF Skywave Radars

PubMed Central

Wei, Yinsheng; Guo, Rujiang; Xu, Rongqing; Tang, Xiudong

2014-01-01

Ionospheric phase perturbation with large amplitude causes broadening sea clutter's Bragg peaks to overlap each other; the performance of traditional decontamination methods about filtering Bragg peak is poor, which greatly limits the detection performance of HF skywave radars. In view of the ionospheric phase perturbation with large amplitude, this paper proposes a cascaded approach based on improved S-method to correct the ionospheric phase contamination. This approach consists of two correction steps. At the first step, a time-frequency distribution method based on improved S-method is adopted and an optimal detection method is designed to obtain a coarse ionospheric modulation estimation from the time-frequency distribution. At the second correction step, based on the phase gradient algorithm (PGA) is exploited to eliminate the residual contamination. Finally, use the measured data to verify the effectiveness of the method. Simulation results show the time-frequency resolution of this method is high and is not affected by the interference of the cross term; ionospheric phase perturbation with large amplitude can be corrected in low signal-to-noise (SNR); such a cascade correction method has a good effect. PMID:24578656

Protective effect of poly (α- L-glutamate) against UV and γ-irradiation

NASA Astrophysics Data System (ADS)

Furuta, Masakazu; Huy, Nguyen Quang; Tsuchiya, Akihito; Nakatsuka, Hiroshige; Hayashi, Toshio

2004-09-01

We occasionally found that poly (α- L-glutamate) showed a superior protective effect on enzymes against UV and 60Co-γ irradiation. We selected papain and α-amylase as a model enzyme and irradiated the aqueous solution (10 mg/ml) of each enzyme with UV and 60Co-γ rays in the presence of poly (α- L-glutamate) (α-PGA), poly (glucosyl oxyethyl methacrylate (GEMA)), and glucose (1.25% w/v each). The mixture of the three compounds has a significant protective effect on the activity of papain solution showing 40% of remaining activity twice as much as the control containing no additive at the dose of 15 kGy. Among them, α-PGA showed the highest protecting effect on the both papain and α-amylase even after 10-kGy irradiation at which 50% of the activity was retained. α-PGA also showed significant protective activity on α-amylase against UV both in solution and under dried state.

Environmental responsiveness of polygalacturonic acid-based multilayers to variation of pH.

PubMed

Westwood, Marta; Noel, Timothy R; Parker, Roger

2011-02-14

The effect of pH on the stability of layer-by-layer deposited polygalacturonic acid (PGalA)-based multilayer films prepared with the polycations poly-L-lysine, chitosan, and lysozyme is studied. The response was characterized using a quartz crystal microbalance, dual polarization interferometry, and Fourier transform infrared spectroscopy which probe multilayer thickness, density, polymer mass (composition and speciation), and hydration. All multilayers showed irreversible changes in response to pH change becoming thinner due to the partial disassembly. Preferential loss of the polycation (50-80% w/w) and relative small losses of PGaLA (10-35% w/w) occurred. The charge density on the polycation has a strong influence on the response to the acid cycle. Most of the disassembly takes place at the pH lower that pK(a) of PGaLA, indicating that this factor was crucial in determining the stability of the films. The pH challenge also revealed a polycation-dependent shift to acid pH in the PGaLA pK(a).

Linking sewage pollution and water quality to spatial patterns of Porites lobata growth anomalies in Puako, Hawaii.

PubMed

Yoshioka, Reyn M; Kim, Catherine J S; Tracy, Allison M; Most, Rebecca; Harvell, C Drew

2016-03-15

Sewage pollution threatens the health of coastal populations and ecosystems, including coral reefs. We investigated spatial patterns of sewage pollution in Puako, Hawaii using enterococci concentrations and δ(15)N Ulva fasciata macroalgal bioassays to assess relationships with the coral disease Porites lobata growth anomalies (PGAs). PGA severity and enterococci concentrations were high, spatially variable, and positively related. Bioassay algal δ(15)N showed low sewage pollution at the reef edge while high values of resident algae indicated sewage pollution nearshore. Neither δ(15)N metric predicted PGA measures, though bioassay δ(15)N was negatively related to coral cover. Furthermore, PGA prevalence was much higher than previously recorded in Hawaii and the greater Indo-Pacific, highlighting Puako as an area of concern. Although further work is needed to resolve the relationship between sewage pollution and coral cover and disease, these results implicate sewage pollution as a contributor to diminished reef health. Copyright © 2016 Elsevier Ltd. All rights reserved.

Intelligent Optimization of the Film-to-Fiber Ratio of a Degradable Braided Bicomponent Ureteral Stent

PubMed Central

Liu, Xiaoyan; Li, Feng; Ding, Yongsheng; Zou, Ting; Wang, Lu; Hao, Kuangrong

2015-01-01

A hierarchical support vector regression (SVR) model (HSVRM) was employed to correlate the compositions and mechanical properties of bicomponent stents composed of poly(lactic-co-glycolic acid) (PGLA) film and poly(glycolic acid) (PGA) fibers for urethral repair for the first time. PGLA film and PGA fibers could provide ureteral stents with good compressive and tensile properties, respectively. In bicomponent stents, high film content led to high stiffness, while high fiber content resulted in poor compressional properties. To simplify the procedures to optimize the ratio of PGLA film and PGA fiber in the stents, a hierarchical support vector regression model (HSVRM) and particle swarm optimization (PSO) algorithm were used to construct relationships between the film-to-fiber weight ratio and the measured compressional/tensile properties of the stents. The experimental data and simulated data fit well, proving that the HSVRM could closely reflect the relationship between the component ratio and performance properties of the ureteral stents. PMID:28793658

Intranasal administration of poly-gamma glutamate induced antiviral activity and protective immune responses against H1N1 influenza A virus infection.

PubMed

Kim, Eun-Ha; Choi, Young-Ki; Kim, Chul-Joong; Sung, Moon-Hee; Poo, Haryoung

2015-10-06

The global outbreak of a novel swine-origin strain of the 2009 H1N1 influenza A virus and the sudden, worldwide increase in oseltamivir-resistant H1N1 influenza A viruses highlight the urgent need for novel antiviral therapy. Here, we investigated the antiviral efficacy of poly-gamma glutamate (γ-PGA), a safe and edible biomaterial that is naturally synthesized by Bacillus subtilis, against A/Puerto Rico/8/1934 (PR8) and A/California/04/2009 (CA04) H1N1 influenza A virus infections in C57BL/6 mice. Intranasal administration of γ-PGA for 5 days post-infection improved survival, increased production of antiviral cytokines including interferon-beta (IFN-β) and interleukin-12 (IL-12), and enhanced activation of natural killer (NK) cells and influenza antigen-specific cytotoxic T lymphocytes (CTL) activity. These results suggest that γ-PGA protects mice against H1N1 influenza A virus by enhancing antiviral immune responses.

Analysis of socket preservation using polylactide and polyglycolide (PLA-PGA) sponge: a clinical, radiographic, and histologic study.

PubMed

Madan, Rohit; Mohan, Ranjana; Bains, Vivek K; Gupta, Vivek; Singh, G P; Madan, Mani

2014-01-01

The aim of this study was to evaluate the extraction socket healing and dimensional changes following alveolar ridge preservation using polylactide and polyglycolide (PLA-PGA) sponge. Fifteen patients were selected for alveolar socket preservation immediately following tooth extraction. Monoradicular maxillary and mandibular teeth were evaluated. The selected sockets had intact sockets walls with a minimum of 7 mm of residual alveolar bone height. The test sites were thoroughly debrided and grafted with PLA-PGA sponge, while the control sites underwent natural healing. Computed tomography (CT) measurements were taken at baseline and 6 months. After 6 months of healing, final CT measurements were performed, and trephine core biopsy specimens were obtained for histologic analysis. Implants were placed immediately after biopsy harvesting. All subjects completed the study, and all sites healed without adverse events and allowed for implant placement. The mean difference in socket height, width, and density after 6 months was statistically significantly higher in the test sites compared with control sites. Clinical measurement at the midbuccal site of the alveolar socket showed a mean loss of 2.45 ± 0.67 mm in the control group, compared with a mean gain of 1.28 ± 0.58 mm in the test group. All test sites showed minimal ridge alterations, and statistically significant differences were observed between the test and control sites with respect to bone composition and horizontal and vertical bone loss, indicating that PLA-PGA sponge is suitable for alveolar ridge preservation.

Engineering cartilage substitute with a specific size and shape using porous high-density polyethylene (HDPE) as internal support.

PubMed

Wu, Yujia; Zhu, Lie; Jiang, Hua; Liu, Wei; Liu, Yu; Cao, Yilin; Zhou, Guangdong

2010-04-01

Despite the great advances in cartilage engineering, constructing cartilage of large sizes and appropriate shapes remains a great challenge, owing to limits in thickness of regenerated cartilage and to inferior mechanical properties of scaffolds. This study introduces a pre-shaped polyglycolic acid (PGA)-coated porous high-density polyethylene (HDPE) scaffold to overcome these challenges. HDPE was carved into cylindrical rods and wrapped around by PGA fibres to form PGA-HDPE scaffolds. Porcine chondrocytes were seeded into the scaffolds and the constructs were cultured in vitro for 2 weeks before subcutaneous implantation into nude mice. Scaffolds made purely of PGA with the same size and shape were used as a control. After 8 weeks of implantation, the construct formed cartilage-like tissue and retained its pre-designed shape and size. In addition, the regenerated cartilage grew and completely surrounded the HDPE core, which made the entire cartilage substitute biocompatible to its implanted environment as native cartilage similarly does. By contrast, the shape and size of the constructs in the control group seriously deformed and obvious hollow cavity and necrotic tissue were observed in the inner region. These results demonstrate that the use of HDPE as the internal support of a biodegradable scaffold has the potential to circumvent the problems of limitations in size and shape, with promising implications for the development of engineered cartilage appropriate for clinical applications. Copyright 2009 British Association of Plastic, Reconstructive and Aesthetic Surgeons. Published by Elsevier Ltd. All rights reserved.

Whole-Genome Sequencing and Comparative Genome Analysis of Bacillus subtilis Strains Isolated from Non-Salted Fermented Soybean Foods

PubMed Central

Kamada, Mayumi; Hase, Sumitaka; Fujii, Kazushi; Miyake, Masato; Sato, Kengo; Kimura, Keitarou; Sakakibara, Yasubumi

2015-01-01

Bacillus subtilis is the main component in the fermentation of soybeans. To investigate the genetics of the soybean-fermenting B. subtilis strains and its relationship with the productivity of extracellular poly-γ-glutamic acid (γPGA), we sequenced the whole genome of eight B. subtilis stains isolated from non-salted fermented soybean foods in Southeast Asia. Assembled nucleotide sequences were compared with those of a natto (fermented soybean food) starter strain B. subtilis BEST195 and the laboratory standard strain B. subtilis 168 that is incapable of γPGA production. Detected variants were investigated in terms of insertion sequences, biotin synthesis, production of subtilisin NAT, and regulatory genes for γPGA synthesis, which were related to fermentation process. Comparing genome sequences, we found that the strains that produce γPGA have a deletion in a protein that constitutes the flagellar basal body, and this deletion was not found in the non-producing strains. We further identified diversity in variants of the bio operon, which is responsible for the biotin auxotrophism of the natto starter strains. Phylogenetic analysis using multilocus sequencing typing revealed that the B. subtilis strains isolated from the non-salted fermented soybeans were not clustered together, while the natto-fermenting strains were tightly clustered; this analysis also suggested that the strain isolated from “Tua Nao” of Thailand traces a different evolutionary process from other strains. PMID:26505996

Improvement of tuberous sclerosis complex (TSC) skin tumors during long-term treatment with oral sirolimus.

PubMed

Nathan, Neera; Wang, Ji-an; Li, Shaowei; Cowen, Edward W; Haughey, Mary; Moss, Joel; Darling, Thomas N

2015-11-01

Oral mechanistic target of rapamycin inhibitors have been shown to reduce visceral tumor volume in patients with tuberous sclerosis complex (TSC). We sought to evaluate the cutaneous response to oral sirolimus in patients with TSC and an indication for systemic treatment, including long-term effects. A retrospective analysis of 14 adult patients with TSC prescribed sirolimus to treat lymphangioleiomyomatosis was performed. Serial photographs of angiofibromas, shagreen patches, and ungual fibromas taken before, during, and after the treatment period were blinded, then assessed using the Physician Global Assessment of Clinical Condition (PGA). Microscopic and molecular studies were performed on skin tumors harvested before and during treatment. Sirolimus significantly improved angiofibromas (median treatment duration 12 months; median PGA score 4.5 [range 1.5-5]; Wilcoxon signed rank test, P = .018) and shagreen patches (median treatment duration 10 months; median PGA score 4.5 [range 3.5-5]; Wilcoxon signed rank test, P = .039), whereas ungual fibromas improved in some patients (median treatment duration 6.5 months; median PGA score 4.66 [range 2.75-5]; Wilcoxon signed rank test, P = .109). Clinical, immunohistochemical, or molecular evidence of resistance was not observed (range 5-64 months of treatment). This was a retrospective analysis limited to adult women with lymphangioleiomyomatosis. Oral sirolimus is an effective long-term therapy for TSC skin tumors, particularly angiofibromas, in patients for whom systemic treatment is indicated. Published by Elsevier Inc.

Exploring the Differences Between the European (SHARE) and the Reference Italian Seismic Hazard Models

NASA Astrophysics Data System (ADS)

Visini, F.; Meletti, C.; D'Amico, V.; Rovida, A.; Stucchi, M.

2014-12-01

The recent release of the probabilistic seismic hazard assessment (PSHA) model for Europe by the SHARE project (Giardini et al., 2013, www.share-eu.org) arises questions about the comparison between its results for Italy and the official Italian seismic hazard model (MPS04; Stucchi et al., 2011) adopted by the building code. The goal of such a comparison is identifying the main input elements that produce the differences between the two models. It is worthwhile to remark that each PSHA is realized with data and knowledge available at the time of the release. Therefore, even if a new model provides estimates significantly different from the previous ones that does not mean that old models are wrong, but probably that the current knowledge is strongly changed and improved. Looking at the hazard maps with 10% probability of exceedance in 50 years (adopted as the standard input in the Italian building code), the SHARE model shows increased expected values with respect to the MPS04 model, up to 70% for PGA. However, looking in detail at all output parameters of both the models, we observe a different behaviour for other spectral accelerations. In fact, for spectral periods greater than 0.3 s, the current reference PSHA for Italy proposes higher values than the SHARE model for many and large areas. This observation suggests that this behaviour could not be due to a different definition of seismic sources and relevant seismicity rates; it mainly seems the result of the adoption of recent ground-motion prediction equations (GMPEs) that estimate higher values for PGA and for accelerations with periods lower than 0.3 s and lower values for higher periods with respect to old GMPEs. Another important set of tests consisted in analysing separately the PSHA results obtained by the three source models adopted in SHARE (i.e., area sources, fault sources with background, and a refined smoothed seismicity model), whereas MPS04 only uses area sources. Results seem to confirm the strong impact of the new generation GMPEs on the seismic hazard estimates. Giardini D. et al., 2013. Seismic Hazard Harmonization in Europe (SHARE): Online Data Resource, doi:10.12686/SED-00000001-SHARE. Stucchi M. et al., 2011. Seismic Hazard Assessment (2003-2009) for the Italian Building Code. Bull. Seismol. Soc. Am. 101, 1885-1911.

The pharmacokinetics of anthocyanins and their metabolites in humans.

PubMed

de Ferrars, R M; Czank, C; Zhang, Q; Botting, N P; Kroon, P A; Cassidy, A; Kay, C D

2014-07-01

Anthocyanins are phytochemicals with reported vasoactive bioactivity. However, given their instability at neutral pH, they are presumed to undergo significant degradation and subsequent biotransformation. The aim of the present study was to establish the pharmacokinetics of the metabolites of cyanidin-3-glucoside (C3G), a widely consumed dietary phytochemical with potential cardioprotective properties. A 500 mg oral bolus dose of 6,8,10,3',5'-(13)C5-C3G was fed to eight healthy male participants, followed by a 48 h collection (0, 0.5, 1, 2, 4, 6, 24, 48 h) of blood, urine and faecal samples. Samples were analysed by HPLC-ESI-MS/MS with elimination kinetics established using non-compartmental pharmacokinetic modelling. Seventeen (13)C-labelled compounds were identified in the serum, including (13)C5-C3G, its degradation products, protocatechuic acid (PCA) and phloroglucinaldehyde (PGA), 13 metabolites of PCA and 1 metabolite derived from PGA. The maximal concentrations of the phenolic metabolites (Cmax ) ranged from 10 to 2000 nM, between 2 and 30 h (tmax) post-consumption, with half-lives of elimination observed between 0.5 and 96 h. The major phenolic metabolites identified were hippuric acid and ferulic acid, which peaked in the serum at approximately 16 and 8 h respectively. Anthocyanins are metabolized to a structurally diverse range of metabolites that exhibit dynamic kinetic profiles. Understanding the elimination kinetics of these metabolites is key to the design of future studies examining their utility in dietary interventions or as therapeutics for disease risk reduction. © 2014 The Authors. British Journal of Pharmacology published by John Wiley & Sons Ltd on behalf of The British Pharmacological Society.

Specifying the brain anatomy underlying temporo-parietal junction activations for theory of mind: A review using probabilistic atlases from different imaging modalities.

PubMed

Schurz, Matthias; Tholen, Matthias G; Perner, Josef; Mars, Rogier B; Sallet, Jerome

2017-09-01

In this quantitative review, we specified the anatomical basis of brain activity reported in the Temporo-Parietal Junction (TPJ) in Theory of Mind (ToM) research. Using probabilistic brain atlases, we labeled TPJ peak coordinates reported in the literature. This was carried out for four different atlas modalities: (i) gyral-parcellation, (ii) sulco-gyral parcellation, (iii) cytoarchitectonic parcellation and (iv) connectivity-based parcellation. In addition, our review distinguished between two ToM task types (false belief and social animations) and a nonsocial task (attention reorienting). We estimated the mean probabilities of activation for each atlas label, and found that for all three task types part of TPJ activations fell into the same areas: (i) Angular Gyrus (AG) and Lateral Occpital Cortex (LOC) in terms of a gyral atlas, (ii) AG and Superior Temporal Sulcus (STS) in terms of a sulco-gyral atlas, (iii) areas PGa and PGp in terms of cytoarchitecture and (iv) area TPJp in terms of a connectivity-based parcellation atlas. Beside these commonalities, we also found that individual task types showed preferential activation for particular labels. Main findings for the right hemisphere were preferential activation for false belief tasks in AG/PGa, and in Supramarginal Gyrus (SMG)/PFm for attention reorienting. Social animations showed strongest selective activation in the left hemisphere, specifically in left Middle Temporal Gyrus (MTG). We discuss how our results (i.e., identified atlas structures) can provide a new reference for describing future findings, with the aim to integrate different labels and terminologies used for studying brain activity around the TPJ. Hum Brain Mapp 38:4788-4805, 2017. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Kinematic measurements of the vocal-fold displacement waveform in typical children and adult populations: quantification of high-speed endoscopic videos.

PubMed

Patel, Rita; Donohue, Kevin D; Unnikrishnan, Harikrishnan; Kryscio, Richard J

2015-04-01

This article presents a quantitative method for assessing instantaneous and average lateral vocal-fold motion from high-speed digital imaging, with a focus on developmental changes in vocal-fold kinematics during childhood. Vocal-fold vibrations were analyzed for 28 children (aged 5-11 years) and 28 adults (aged 21-45 years) without voice disorders. The following kinematic features were analyzed from the vocal-fold displacement waveforms: relative velocity-based features (normalized average and peak opening and closing velocities), relative acceleration-based features (normalized peak opening and closing accelerations), speed quotient, and normalized peak displacement. Children exhibited significantly larger normalized peak displacements, normalized average and peak opening velocities, normalized average and peak closing velocities, peak opening and closing accelerations, and speed quotient compared to adult women. Values of normalized average closing velocity and speed quotient were higher in children compared to adult men. When compared to adult men, developing children typically have higher estimates of kinematic features related to normalized displacement and its derivatives. In most cases, the kinematic features of children are closer to those of adult men than adult women. Even though boys experience greater changes in glottal length and pitch as they mature, results indicate that girls experience greater changes in kinematic features compared to boys.

Measurement of heat load density profile on acceleration grid in MeV-class negative ion accelerator.

PubMed

Hiratsuka, Junichi; Hanada, Masaya; Kojima, Atsushi; Umeda, Naotaka; Kashiwagi, Mieko; Miyamoto, Kenji; Yoshida, Masafumi; Nishikiori, Ryo; Ichikawa, Masahiro; Watanabe, Kazuhiro; Tobari, Hiroyuki

2016-02-01

To understand the physics of the negative ion extraction/acceleration, the heat load density profile on the acceleration grid has been firstly measured in the ITER prototype accelerator where the negative ions are accelerated to 1 MeV with five acceleration stages. In order to clarify the profile, the peripheries around the apertures on the acceleration grid were separated into thermally insulated 34 blocks with thermocouples. The spatial resolution is as low as 3 mm and small enough to measure the tail of the beam profile with a beam diameter of ∼16 mm. It was found that there were two peaks of heat load density around the aperture. These two peaks were also clarified to be caused by the intercepted negative ions and secondary electrons from detailed investigation by changing the beam optics and gas density profile. This is the first experimental result, which is useful to understand the trajectories of these particles.

Uncertainties in evaluation of hazard and seismic risk

NASA Astrophysics Data System (ADS)

Marmureanu, Gheorghe; Marmureanu, Alexandru; Ortanza Cioflan, Carmen; Manea, Elena-Florinela

2015-04-01

Two methods are commonly used for seismic hazard assessment: probabilistic (PSHA) and deterministic(DSHA) seismic hazard analysis.Selection of a ground motion for engineering design requires a clear understanding of seismic hazard and risk among stakeholders, seismologists and engineers. What is wrong with traditional PSHA or DSHA ? PSHA common used in engineering is using four assumptions developed by Cornell in 1968:(1)-Constant-in-time average occurrence rate of earthquakes; (2)-Single point source; (3).Variability of ground motion at a site is independent;(4)-Poisson(or "memory - less") behavior of earthquake occurrences. It is a probabilistic method and "when the causality dies, its place is taken by probability, prestigious term meant to define the inability of us to predict the course of nature"(Nils Bohr). DSHA method was used for the original design of Fukushima Daichii, but Japanese authorities moved to probabilistic assessment methods and the probability of exceeding of the design basis acceleration was expected to be 10-4-10-6 . It was exceeded and it was a violation of the principles of deterministic hazard analysis (ignoring historical events)(Klügel,J,U, EGU,2014, ISSO). PSHA was developed from mathematical statistics and is not based on earthquake science(invalid physical models- point source and Poisson distribution; invalid mathematics; misinterpretation of annual probability of exceeding or return period etc.) and become a pure numerical "creation" (Wang, PAGEOPH.168(2011),11-25). An uncertainty which is a key component for seismic hazard assessment including both PSHA and DSHA is the ground motion attenuation relationship or the so-called ground motion prediction equation (GMPE) which describes a relationship between a ground motion parameter (i.e., PGA,MMI etc.), earthquake magnitude M, source to site distance R, and an uncertainty. So far, no one is taking into consideration strong nonlinear behavior of soils during of strong earthquakes. But, how many cities, villages, metropolitan areas etc. in seismic regions are constructed on rock? Most of them are located on soil deposits? A soil is of basic type sand or gravel (termed coarse soils), silt or clay (termed fine soils) etc. The effect on nonlinearity is very large. For example, if we maintain the same spectral amplification factor (SAF=5.8942) as for relatively strong earthquake on May 3,1990(MW=6.4),then at Bacǎu seismic station for Vrancea earthquake on May 30,1990 (MW =6.9) the peak acceleration has to be a*max =0.154g and the actual recorded was only, amax =0.135g(-14.16%). Also, for Vrancea earthquake on August 30,1986(MW=7.1),the peak acceleration has to be a*max = 0.107g instead of real value recorded of 0.0736 g(- 45.57%). There are many data for more than 60 seismic stations. There is a strong nonlinear dependence of SAF with earthquake magnitude in each site. The authors are coming with an alternative approach called "real spectral amplification factors" instead of GMPE for all extra-Carpathian area where all cities and villages are located on soil deposits. Key words: Probabilistic Seismic Hazard; Uncertainties; Nonlinear seismology; Spectral amplification factors(SAF).

Long-term degradation of a poly-lactide co-glycolide/β-tricalcium phosphate biocomposite interference screw.

PubMed

Barber, F Alan; Dockery, W D; Hrnack, Scott A

2011-05-01

To evaluate the long-term in vivo degradation of biodegradable interference screws made of poly-L-lactide co-glycolide (poly-L-lactic acid [PLLA]/polyglycolic acid [PGA]) and β-tricalcium phosphate (β-TCP). To study in vivo the biological behavior of a PLLA/PGA/β-TCP biocomposite screw (Milagro; DePuy Mitek, Raynham, MA), an institutional review board-approved program using anterior cruciate ligament (ACL) interference fixation screws was initiated in 2005. Thirteen patients who had bone-patellar tendon-bone ACL reconstruction fixed at both the femur and tibia with PLLA/PGA/β-TCP screws at least 24 months earlier were evaluated by physical, radiographic, and computed tomography (CT) evaluations. Lysholm, Tegner, Cincinnati, and International Knee Documentation Committee scores were also obtained. Radiographs and CT scans of the operated knee were obtained. CT scan data measured in Hounsfield units (HU) evaluated the material density at the screw and bone plug sites. Soft-tissue and cancellous and cortical bone site readings were also taken. Osteoconductivity scores were determined at the screw sites by use of an ossification quality score (range, 1 to 4). Eleven men and two women were evaluated at a mean of 38 months after surgery (range, 24 to 49 months). CT scans and radiographs showed the bone plug fused to the tunnel wall with no PLLA/PGA/β-TCP screw remaining. The screws were replaced with material that was calcified and non-trabecular. Osteoconductivity was present in 21 of 26 tunnels (81%) and complete (type 4 ossification) in 5 of 26 (19%). Mean screw site densities (femoral, 159 HU; tibial, 157 HU) were not different from the mean cancellous bone density (femoral, 146 HU; tibial, 140 HU). No positive pivot-shift tests were found. Lysholm, Tegner, and Cincinnati scores improved from 44, 3.7, and 37 preoperatively to 93, 6, and 87 at follow-up, respectively. The mean KT arthrometer (MEDmetric, San Diego, CA) difference was 0.8 mm. The PLLA/PGA/β-TCP interference screw completely degraded, and no remnant was present 3 years after implantation for a bone-patellar tendon-bone graft ACL reconstruction. Osteoconductivity was confirmed in 21 of 26 screw sites (81%) and completely filled the site in 5 of 26 (19%). The PLLA/PGA/β-TCP biocomposite interference screw is osteoconductive. Level IV, therapeutic case series. Copyright © 2011 Arthroscopy Association of North America. Published by Elsevier Inc. All rights reserved.

The effect of motorcycle helmet fit on estimating head impact kinematics from residual liner crush.

PubMed

Bonin, Stephanie J; Gardiner, John C; Onar-Thomas, Arzu; Asfour, Shihab S; Siegmund, Gunter P

2017-09-01

Proper helmet fit is important for optimizing head protection during an impact, yet many motorcyclists wear helmets that do not properly fit their heads. The goals of this study are i) to quantify how a mismatch in headform size and motorcycle helmet size affects headform peak acceleration and head injury criteria (HIC), and ii) to determine if peak acceleration, HIC, and impact speed can be estimated from the foam liner's maximum residual crush depth or residual crush volume. Shorty-style helmets (4 sizes of a single model) were tested on instrumented headforms (4 sizes) during linear impacts between 2.0 and 10.5m/s to the forehead region. Helmets were CT scanned to quantify residual crush depth and volume. Separate linear regression models were used to quantify how the response variables (peak acceleration (g), HIC, and impact speed (m/s)) were related to the predictor variables (maximum crush depth (mm), crush volume (cm 3 ), and the difference in circumference between the helmet and headform (cm)). Overall, we found that increasingly oversized helmets reduced peak headform acceleration and HIC for a given impact speed for maximum residual crush depths less than 7.9mm and residual crush volume less than 40cm 3 . Below these levels of residual crush, we found that peak headform acceleration, HIC, and impact speed can be estimated from a helmet's residual crush. Above these crush thresholds, large variations in headform kinematics are present, possibly related to densification of the foam liner during the impact. Copyright © 2017 Elsevier Ltd. All rights reserved.

Analysis on the time and frequency domains of the acceleration in front crawl stroke.

PubMed

Gil, Joaquín Madera; Moreno, Luis-Millán González; Mahiques, Juan Benavent; Muñoz, Víctor Tella

2012-05-01

The swimming involves accelerations and decelerations in the swimmer's body. Thus, the main objective of this study is to make a temporal and frequency analysis of the acceleration in front crawl swimming, regarding the gender and the performance. The sample was composed by 31 male swimmers (15 of high-level and 16 of low-level) and 20 female swimmers (11 of high-level and 9 of low-level). The acceleration was registered from the third complete cycle during eight seconds in a 25 meters maximum velocity test. A position transducer (200Hz) was used to collect the data, and it was synchronized to an aquatic camera (25Hz). The acceleration in the temporal (root mean square, minimum and maximum of the acceleration) and frequency (power peak, power peak frequency and spectral area) domains was calculated with Fourier analysis, as well as the velocity and the spectrums distribution in function to present one or more main peaks (type 1 and type 2). A one-way ANOVA was used to establish differences between gender and performance. Results show differences between genders in all the temporal domain variables (p<0.05) and only the Spectral Area (SA) in the frequency domain (p<0.05). Between gender and performance, only the Root Mean Square (RMS) showed differences in the performance of the male swimmers (p<0.05) and in the higher level swimmers, the Maximum (Max) and the Power Peak (PP) of the acceleration showed differences between both genders (p<0.05). These results confirms the importance of knowing the RMS to determine the efficiency of the swimmers regarding gender and performance level.

An insight on correlations between kinematic rupture parameters from dynamic ruptures on rough faults

NASA Astrophysics Data System (ADS)

Thingbijam, Kiran Kumar; Galis, Martin; Vyas, Jagdish; Mai, P. Martin

2017-04-01

We examine the spatial interdependence between kinematic parameters of earthquake rupture, which include slip, rise-time (total duration of slip), acceleration time (time-to-peak slip velocity), peak slip velocity, and rupture velocity. These parameters were inferred from dynamic rupture models obtained by simulating spontaneous rupture on faults with varying degree of surface-roughness. We observe that the correlations between these parameters are better described by non-linear correlations (that is, on logarithm-logarithm scale) than by linear correlations. Slip and rise-time are positively correlated while these two parameters do not correlate with acceleration time, peak slip velocity, and rupture velocity. On the other hand, peak slip velocity correlates positively with rupture velocity but negatively with acceleration time. Acceleration time correlates negatively with rupture velocity. However, the observed correlations could be due to weak heterogeneity of the slip distributions given by the dynamic models. Therefore, the observed correlations may apply only to those parts of rupture plane with weak slip heterogeneity if earthquake-rupture associate highly heterogeneous slip distributions. Our findings will help to improve pseudo-dynamic rupture generators for efficient broadband ground-motion simulations for seismic hazard studies.

Complete Genome Sequence of the Poly-γ-Glutamate-Synthesizing Bacterium Bacillus subtilis Bs-115.

PubMed

Wang, Fengqing; Gong, Lijuan; Zhou, Lihong; Liang, Jinzhong

2018-04-19

Bacillus subtilis Bs-115 was isolated from the soil of a corn field in Yutai County, Jinan City, Shandong Province, People's Republic of China, and is characterized by the efficient synthesis of poly-γ-glutamate (γ-PGA), with corn saccharification liquid as the sole energy and carbon source during the process of γ-PGA formation. Here, we report the complete genome sequence of Bacillus subtilis Bs-115 and the genes associated with poly-γ-glutamate synthesis. Copyright © 2018 Wang et al.

Fast Identification of Near-Trench Earthquakes Along the Mexican Subduction Zone Based on Characteristics of Ground Motion in Mexico City

NASA Astrophysics Data System (ADS)

Perez-Campos, X.; Singh, S. K.; Arroyo, D.; Rodríguez, Q.; Iglesias, A.

2015-12-01

The disastrous 1985 Michoacan earthquake gave rise to a seismic alert system for Mexico City which became operational in 1991. Initially limited to earthquakes along the Guerrero coast, the system now has a much wider coverage. Also, the 2004 Sumatra earthquake exposed the need for a tsunami early warning along the Mexican subduction zone. A fast identification of near-trench earthquakes along this zone may be useful in issuing a reliable early tsunami alert. The confusion caused by low PGA for the magnitude of an earthquake, leading to "missed" seismic alert, would be averted if its near-trench origin can be quickly established. It may also help reveal the spatial extent and degree of seismic coupling on the near-trench portion of the plate interface. This would lead to a better understanding of tsunami potential and seismic hazard along the Mexican subduction zone. We explore three methods for quick detection of near-trench earthquakes, testing them on recordings of 65 earthquakes at station CU in Mexico City (4.8 ≤Mw≤8.0; 270≤R≤615 km). The first method is based on the ratio of total to high-frequency energy, ER (Shapiro et al., 1998). The second method is based on parameter Sa*(6) which is the pseudo-acceleration response spectrum with 5% damping, Sa, at 6 s normalized by the PGA. The third parameter is the PGA residual, RESN, at CU, with respect to a newly-derived ground motion prediction equation at CU for coastal shallow-dipping thrust earthquakes following a bayesian approach. Since the near-trench earthquakes are relatively deficient in high-frequency radiation, we expect ER and Sa*(6) to be relatively large and RESN to be negative for such events. Tests on CU recordings show that if ER ≥ 100 and/or Sa*(6) ≥ 0.70, then the earthquake is near trench; for these events RESN ≤ 0. Such an event has greater tsunami potential. Few misidentifications and missed events are most probably a consequence of poor location, although unusual depth and source characteristics may also be responsible in some cases. We propose routine computation of these parameters (along with location and magnitude) by the National Seismological Service of Mexico and dissemination of the information to other interested agencies which are in charge of tsunami alert, seismic alert, and near real time ground motion intensity maps for Mexico City.

How Well Does the Latest Anthropomorphic Test Device Mimic Human Impact Responses?

NASA Technical Reports Server (NTRS)

Newby, Nate; Somers, Jeff; Caldewll, Erin; Gernhardt, Michael

2014-01-01

One of the goals of the NASA Occupant Protection Group is to understand the human tolerance to dynamic loading. This knowledge has to come through indirect approaches such as existing human response databases, anthropometric test devices (ATD), animal testing, post-­-mortem human subjects, and models. This study investigated the biofidelity of the National Highway Traffic Safety Administration's ATD named the THOR (test device for human occupant restraint). If THOR responds comparably to humans, then it could potentially be used as a human surrogate to help validate space vehicle requirements for occupant protection. The THOR responses to frontal and spinal impacts (ranging from 8 to 12 G with rise times of 40, 70, and 100 ms) were measured and compared to human volunteer responses (95 trials in frontal and 58 in spinal) previously collected by the U. S. Air Force on the same horizontal impact accelerator. The impact acceleration profiles tested are within the expected range of multi-­-purpose crew vehicle (MPCV) landing dynamics. A correlation score was calculated for each THOR to human comparison using CORA (CORrelation and Analysis) software. A two-­-parameter beta distribution model fit was obtained for each dependent variable using maximum likelihood estimation. For frontal impacts, the THOR head x-­-acceleration peak response correlated with the human response at 8 and 10-­-G 100 ms but not 10-­-G 70 ms. The phase lagged the human response. Head z-­-acceleration was not correlated. Chest x-­-acceleration was in phase, had a higher peak response, and was well correlated with lighter subjects (Cora = 0.8 for 46 kg vs. Cora = 0.4 for 126 kg). Head x-­-displacement had a leading phase. Several subjects responded with the same peak displacement but the mean of the group was lower. The shoulder x-­-displacement was in phase but had higher peaks than the human response. For spinal impacts, the THOR head x-­-acceleration was not well correlated. Head and chest z-­-acceleration was in phase but had a higher peak response. Chest z-­-acceleration was highly correlated with heavier subjects at lower G pulses (Cora = 0.86 for 125 kg at 8 G). The human response was variable in shoulder z-­-displacement but the THOR was in phase and was comparable to the mean peak response. Head x-­- and z-­-displacement was in phase but had higher peaks. Seat pan forces were well correlated, were in phase, but had a larger peak response than most subjects. The THOR does not respond to frontal and spinal impacts exactly the same way that a human does. Some responses are well matched and others are not. Understanding the strengths and weaknesses of this ATD is an important first step in determining its usefulness in occupant protection at NASA

Effects of different computer typing speeds on acceleration and peak contact pressure of the fingertips during computer typing.

PubMed

Yoo, Won-Gyu

2015-01-01

[Purpose] This study showed the effects of different computer typing speeds on acceleration and peak contact pressure of the fingertips during computer typing. [Subjects] Twenty-one male computer workers voluntarily consented to participate in this study. They consisted of 7 workers who could type 200-300 characteristics/minute, 7 workers who could type 300-400 characteristics/minute, and 7 workers who could type 400-500 chracteristics/minute. [Methods] This study was used to measure the acceleration and peak contact pressure of the fingertips for different typing speed groups using an accelerometer and CONFORMat system. [Results] The fingertip contact pressure was increased in the high typing speed group compared with the low and medium typing speed groups. The fingertip acceleration was increased in the high typing speed group compared with the low and medium typing speed groups. [Conclusion] The results of the present study indicate that a fast typing speed cause continuous pressure stress to be applied to the fingers, thereby creating pain in the fingers.

Stochastic shock response spectrum decomposition method based on probabilistic definitions of temporal peak acceleration, spectral energy, and phase lag distributions of mechanical impact pyrotechnic shock test data

NASA Astrophysics Data System (ADS)

Hwang, James Ho-Jin; Duran, Adam

2016-08-01

Most of the times pyrotechnic shock design and test requirements for space systems are provided in Shock Response Spectrum (SRS) without the input time history. Since the SRS does not describe the input or the environment, a decomposition method is used to obtain the source time history. The main objective of this paper is to develop a decomposition method producing input time histories that can satisfy the SRS requirement based on the pyrotechnic shock test data measured from a mechanical impact test apparatus. At the heart of this decomposition method is the statistical representation of the pyrotechnic shock test data measured from the MIT Lincoln Laboratory (LL) designed Universal Pyrotechnic Shock Simulator (UPSS). Each pyrotechnic shock test data measured at the interface of a test unit has been analyzed to produce the temporal peak acceleration, Root Mean Square (RMS) acceleration, and the phase lag at each band center frequency. Maximum SRS of each filtered time history has been calculated to produce a relationship between the input and the response. Two new definitions are proposed as a result. The Peak Ratio (PR) is defined as the ratio between the maximum SRS and the temporal peak acceleration at each band center frequency. The ratio between the maximum SRS and the RMS acceleration is defined as the Energy Ratio (ER) at each band center frequency. Phase lag is estimated based on the time delay between the temporal peak acceleration at each band center frequency and the peak acceleration at the lowest band center frequency. This stochastic process has been applied to more than one hundred pyrotechnic shock test data to produce probabilistic definitions of the PR, ER, and the phase lag. The SRS is decomposed at each band center frequency using damped sinusoids with the PR and the decays obtained by matching the ER of the damped sinusoids to the ER of the test data. The final step in this stochastic SRS decomposition process is the Monte Carlo (MC) simulation. The MC simulation identifies combinations of the PR and decays that can meet the SRS requirement at each band center frequency. Decomposed input time histories are produced by summing the converged damped sinusoids with the MC simulation of the phase lag distribution.

Comparison of the efficacy of biologics versus conventional systemic therapies in the treatment of psoriasis at a comprehensive psoriasis care center.

PubMed

Au, Shiu-Chung; Madani, Abdulaziz; Alhaddad, Marwan; Alkofide, Maha; Gottlieb, Alice B

2013-08-01

The efficacy of biologic treatment for psoriasis has not been compared to that of conventional systemic therapies and phototherapy outside of clinical trial settings. Retrospective, cross-sectional. All patient visits with a code for psoriasis (ICD-9 696.1) in the clinical practice of two dermatologists with a high percentage (over 70% of chief complaints) of psoriasis patients from Jan 1, 2008 to Jan 4, 2012 inclusive were included in this retrospective data analysis. Patients were excluded if the baseline Physician's Global Assessment (PGA) at start of treatment was unknown, or less than 3 (moderate). The practice is a comprehensive psoriasis care center in the Northeastern United States serving a metropolitan population of over 4 million people. Patients were divided by treatment type (biologic, conventional systemic or both) and history of previous treatments. Patients were evaluated by Body Surface Area (BSA), PGA, Simple-Measure for Assessing Psoriasis Activity (S-MAPA, calculated by BSA multiplied by PGA). Patients were evaluated at baseline, 8, 12, 16, and 24 weeks after start of treatment. Patients must have completed at least 8 weeks on a single treatment in order to be included. 46 courses of biologics, 12 courses of conventional systemic therapies, and 18 courses of both together were identified with PGA 3 or greater at baseline. Baseline S-MAPA for biologics was 74, for non-biologic systemics was 62.25. At week 24, S-MAPA improved 70.2% over baseline in patients treated with biologics, patients treated with non-biologic systemics improved by only 40.4% (P<0.05). The average number of prior treatments for patients on biologics was 1.87 versus 1.25 for patients on conventional systemic therapies (P=0.169). Biologics show superior results to conventional systemic therapies (70% improvement versus 40% improvement) for the treatment of patients with moderate to severe psoriasis, as measured by decrease in S-MAPA (PGA multiplied by BSA) at week 24. These results were observed despite the fact that patients on biologics had a greater baseline severity and had a greater number of previous treatments.

Multi-scale finite element analyses for stress and strain evaluations of braid fibril artificial blood vessel and smooth muscle cell.

PubMed

Nakamachi, Eiji; Uchida, Takahiro; Kuramae, Hiroyuki; Morita, Yusuke

2014-08-01

In this study, we developed a multi-scale finite element (FE) analysis code to obtain the stress and strain that occurred in the smooth muscle cell (SMC) at micro-scale, which was seeded in the real fabricated braid fibril artificial blood vessel. This FE code can predict the dynamic response of stress under the blood pressure loading. We try to establish a computer-aided engineering (CAE)-driven scaffold design technique for the blood vessel regeneration. Until now, there occurred the great progresses for the endothelial cell activation and intima layer regeneration in the blood vessel regeneration study. However, there remains the difficulty of the SMC activation and media layer regeneration. Therefore, many researchers are now studying to elucidate the fundamental mechanism of SMC activation and media layer regeneration by using the biomechanical technique. As the numerical tool, we used the dynamic-explicit FE code PAM-CRASH, ESI Ltd. For the material models, the nonlinear viscoelastic constitutive law was adapted for the human blood vessel, SMC and the extra-cellular matrix, and the elastic law for the polyglycolic acid (PGA) fiber. Through macro-FE and micro-FE analyses of fabricated braid fibril tubes by using PGA fiber under the combined conditions of the orientation angle and the pitch of fiber, we searched an appropriate structure for the stress stimulation for SMC functionalization. Objectives of this study are indicated as follows: 1. to analyze the stress and strain of the human blood vessel and SMC, and 2. to calculate stress and strain of the real fabricated braid fibril artificial blood vessel and SMC to search an appropriate PGA fiber structure under combined conditions of PGA fiber numbers, 12 and 24, and the helical orientation angles of fiber, 15, 30, 45, 60, and 75 degrees. Finally, we found a braid fibril tube, which has an angle of 15 degree and 12 PGA fibers, as a most appropriate artificial blood vessel for SMC functionalization. Copyright © 2014 John Wiley & Sons, Ltd.

Encapsulation of curcumin in polyelectrolyte nanocapsules and their neuroprotective activity

NASA Astrophysics Data System (ADS)

Szczepanowicz, Krzysztof; Jantas, Danuta; Piotrowski, Marek; Staroń, Jakub; Leśkiewicz, Monika; Regulska, Magdalena; Lasoń, Władysław; Warszyński, Piotr

2016-09-01

Poor water solubility and low bioavailability of lipophilic drugs can be potentially improved with the use of delivery systems. In this study, encapsulation of nanoemulsion droplets was utilized to prepare curcumin nanocarriers. Nanosize droplets containing the drug were encapsulated in polyelectrolyte shells formed by the layer-by-layer (LbL) adsorption of biocompatible polyelectrolytes: poly-L-lysine (PLL) and poly-L-glutamic acid (PGA). The size of synthesized nanocapsules was around 100 nm. Their biocompatibility and neuroprotective effects were evaluated on the SH-SY5Y human neuroblastoma cell line using cell viability/toxicity assays (MTT reduction, LDH release). Statistically significant toxic effect was clearly observed for PLL coated nanocapsules (reduction in cell viability about 20%-60%), while nanocapsules with PLL/PGA coating did not evoke any detrimental effects on SH-SY5Y cells. Curcumin encapsulated in PLL/PGA showed similar neuroprotective activity against hydrogen peroxide (H2O2)-induced cell damage, as did 5 μM curcumin pre-dissolved in DMSO (about 16% of protection). Determination of concentration of curcumin in cell lysate confirmed that curcumin in nanocapsules has cell protective effect in lower concentrations (at least 20 times) than when given alone. Intracellular mechanisms of encapsulated curcumin-mediated protection engaged the prevention of the H2O2-induced decrease in mitochondrial membrane potential (MMP) but did not attenuate Reactive Oxygen Species (ROS) formation. The obtained results indicate the utility of PLL/PGA shell nanocapsules as a promising, alternative way of curcumin delivery for neuroprotective purposes with improved efficiency and reduced toxicity.

Chitosan/γ-poly(glutamic acid) scaffolds with surface-modified albumin, elastin and poly-l-lysine for cartilage tissue engineering.

PubMed

Kuo, Yung-Chih; Ku, Hao-Fu; Rajesh, Rajendiran

2017-09-01

Cartilage has limited ability to self-repair due to the absence of blood vessels and nerves. The application of biomaterial scaffolds using biomimetic extracellular matrix (ECM)-related polymers has become an effective approach to production of engineered cartilage. Chitosan/γ-poly(glutamic acid) (γ-PGA) scaffolds with different mass ratios were prepared using genipin as a cross-linker and a freeze-drying method, and their surfaces were modified with elastin, human serum albumin (HSA) and poly-l-lysine (PLL). The scaffolds were formed through a complex between NH 3 + of chitosan and COO - of γ-PGA, confirmed by Fourier transform infrared spectroscopy, and exhibited an interconnected porous morphology in field emission scanning electron microscopy analysis. The prepared chitosan/γ-PGA scaffolds, at a 3:1 ratio, obtained the required porosity (90%), pore size (≥100μm), mechanical strength (compressive strength>4MPa, Young's modulus>4MPa) and biodegradation (30-60%) for articular cartilage tissue engineering applications. Surface modification of the scaffolds showed positive indications with improved activity toward cell proliferation (deoxyribonucleic acid), cell adhesion and ECM (glycoaminoglycans and type II collagen) secretion of bovine knee chondrocytes compared with unmodified scaffolds. In caspase-3 detection, elastin had a higher inhibitory effect on chondrocyte apoptosis in vitro, followed by HSA, and then PLL. We concluded that utilizing chitosan/γ-PGA scaffolds with surface active biomolecules, including elastin, HSA and PLL, can effectively promote the growth of chondrocytes, secrete ECM and improve the regenerative ability of cartilaginous tissues. Copyright © 2017 Elsevier B.V. All rights reserved.

Encapsulation of curcumin in polyelectrolyte nanocapsules and their neuroprotective activity.

PubMed

Szczepanowicz, Krzysztof; Jantas, Danuta; Piotrowski, Marek; Staroń, Jakub; Leśkiewicz, Monika; Regulska, Magdalena; Lasoń, Władysław; Warszyński, Piotr

2016-09-02

Poor water solubility and low bioavailability of lipophilic drugs can be potentially improved with the use of delivery systems. In this study, encapsulation of nanoemulsion droplets was utilized to prepare curcumin nanocarriers. Nanosize droplets containing the drug were encapsulated in polyelectrolyte shells formed by the layer-by-layer (LbL) adsorption of biocompatible polyelectrolytes: poly-L-lysine (PLL) and poly-L-glutamic acid (PGA). The size of synthesized nanocapsules was around 100 nm. Their biocompatibility and neuroprotective effects were evaluated on the SH-SY5Y human neuroblastoma cell line using cell viability/toxicity assays (MTT reduction, LDH release). Statistically significant toxic effect was clearly observed for PLL coated nanocapsules (reduction in cell viability about 20%-60%), while nanocapsules with PLL/PGA coating did not evoke any detrimental effects on SH-SY5Y cells. Curcumin encapsulated in PLL/PGA showed similar neuroprotective activity against hydrogen peroxide (H2O2)-induced cell damage, as did 5 μM curcumin pre-dissolved in DMSO (about 16% of protection). Determination of concentration of curcumin in cell lysate confirmed that curcumin in nanocapsules has cell protective effect in lower concentrations (at least 20 times) than when given alone. Intracellular mechanisms of encapsulated curcumin-mediated protection engaged the prevention of the H2O2-induced decrease in mitochondrial membrane potential (MMP) but did not attenuate Reactive Oxygen Species (ROS) formation. The obtained results indicate the utility of PLL/PGA shell nanocapsules as a promising, alternative way of curcumin delivery for neuroprotective purposes with improved efficiency and reduced toxicity.

Extracellular polymer substance synthesized by a halophilic bacterium Chromohalobacter canadensis 28.

PubMed

Radchenkova, Nadja; Boyadzhieva, Ivanka; Atanasova, Nikolina; Poli, Annarita; Finore, Ilaria; Di Donato, Paola; Nicolaus, Barbara; Panchev, Ivan; Kuncheva, Margarita; Kambourova, Margarita

2018-04-03

Halophilic microorganisms are producers of a lot of new compounds whose properties suggest promising perspectives for their biotechnological exploration. Moderate halophilic bacterium Chromohalobacter canadensis 28 was isolated from Pomorie salterns as an extracellular polymer substance (EP) producer. The best carbon source for extracellular polymer production was found to be lactose, a sugar received as a by-product from the dairy industry. After optimization of the culture medium and physicochemical conditions for cultivation, polymer biosynthesis increased more than 2-fold. The highest level of extracellular polymer synthesis by C. canadensis 28 was observed in an unusually high NaCl concentration (15% w/v). Chemical analysis of the purified polymer revealed the presence of an exopolysaccharide (EPS) fraction (14.3% w/w) and protein fraction (72% w/w). HPLC analysis of the protein fraction showed the main presence of polyglutamic acid (PGA) (75.7% w/w). EPS fraction analysis revealed the following sugar composition (% w/w): glucosamine 36.7, glucose 32.3, rhamnose 25.4, xylose 1.7, and not identified sugar 3.9. The hydrogel formed by PGA and EPS fractions showed high swelling behavior, very good emulsifying and stabilizing properties, and good foaming ability. This is the first report for halophilic bacterium able to synthesize a polymer containing PGA fraction. The synthesized biopolymer shows an extremely high hydrophilicity, due to the simultaneous presence of PGA and EPS. The analysis of its functional properties and the presence of glucosamine in the highest proportion in EPS fraction clearly determine the potential of EP synthesized by C. canadensis 28 for application in the cosmetics industry.

Three Dimensional Primary Hepatocyte Culture

NASA Technical Reports Server (NTRS)

Yoffe, Boris

1998-01-01

Our results demonstrated for the first time the feasibility of culturing PHH in microgravity bioreactors that exceeded the longest period obtained using other methods. Within the first week of culture, isolated hepatocytes started to form aggregates, which continuously increased in size (up to 1 cm) and macroscopically appeared as a multidimensional tissue-like assembly. To improve oxygenation and nutrition within the spheroids we performed experiments with the biodegradable nonwoven fiber-based polymers made from PolyGlycolic Acid (PGA). It has been shown that PGA scaffolds stimulate isolated cells to regenerate tissue with defined sizes and shapes and are currently being studied for various tissue-engineering applications. Our data demonstrated that culturing hepatocytes in the presence of PGA scaffolds resulted in more efficient cell assembly and formations of larger cell spheroids (up to 3 cm in length, see figure). The histology of cell aggregates cultured with PGA showed polymer fibers with attached hepatocytes. We initiated experiments to co-culture primary human hepatocytes with human microvascular endothelial cells in the bioreactor. The presence of endothelial cells in co-cultures were established by immunohistochemistry using anti-CD34 monoclonal Ab. Our preliminary data demonstrated that cultures of purified hepatocytes with human microvascular endothelial cells exhibited better growth and expressed higher levels of albumin MRNA for a longer period of time than cultures of ppfified, primary human hepatocytes cultured alone. We also evaluated microsomal deethylation activity of hepatocytes cultured in the presence of endothelial cells.In summary, we have established liver cell culture, which mimicked the structure and function of the parent tissue.

Kinematic Measurements of the Vocal-Fold Displacement Waveform in Typical Children and Adult Populations: Quantification of High-Speed Endoscopic Videos

PubMed Central

Donohue, Kevin D.; Unnikrishnan, Harikrishnan; Kryscio, Richard J.

2015-01-01

Purpose This article presents a quantitative method for assessing instantaneous and average lateral vocal-fold motion from high-speed digital imaging, with a focus on developmental changes in vocal-fold kinematics during childhood. Method Vocal-fold vibrations were analyzed for 28 children (aged 5–11 years) and 28 adults (aged 21–45 years) without voice disorders. The following kinematic features were analyzed from the vocal-fold displacement waveforms: relative velocity-based features (normalized average and peak opening and closing velocities), relative acceleration-based features (normalized peak opening and closing accelerations), speed quotient, and normalized peak displacement. Results Children exhibited significantly larger normalized peak displacements, normalized average and peak opening velocities, normalized average and peak closing velocities, peak opening and closing accelerations, and speed quotient compared to adult women. Values of normalized average closing velocity and speed quotient were higher in children compared to adult men. Conclusions When compared to adult men, developing children typically have higher estimates of kinematic features related to normalized displacement and its derivatives. In most cases, the kinematic features of children are closer to those of adult men than adult women. Even though boys experience greater changes in glottal length and pitch as they mature, results indicate that girls experience greater changes in kinematic features compared to boys. PMID:25652615

Head impact exposure sustained by football players on days of diagnosed concussion.

PubMed

Beckwith, Jonathan G; Greenwald, Richard M; Chu, Jeffrey J; Crisco, Joseph J; Rowson, Steven; Duma, Stefan M; Broglio, Steven P; McAllister, Thomas W; Guskiewicz, Kevin M; Mihalik, Jason P; Anderson, Scott; Schnebel, Brock; Brolinson, P Gunnar; Collins, Michael W

2013-04-01

This study compares the frequency and severity of head impacts sustained by football players on days with and without diagnosed concussion and to identify the sensitivity and specificity of single-impact severity measures to diagnosed injury. One thousand two hundred eight players from eight collegiate football teams and six high school football teams wore instrumented helmets to measure head impacts during all team sessions, of which 95 players were diagnosed with concussion. Eight players sustained two injuries and one sustained three, providing 105 injury cases. Measures of head kinematics (peak linear and rotational acceleration, Gadd severity index, head injury criteria (HIC15), and change in head velocity (Δv)) and the number of head impacts sustained by individual players were compared between days with and without diagnosed concussion. Receiver operating characteristic curves were generated to evaluate the sensitivity and specificity of each kinematic measure to diagnosed concussion using only those impacts that directly preceded diagnosis. Players sustained a higher frequency of impacts and impacts with more severe kinematic properties on days of diagnosed concussion than on days without diagnosed concussion. Forty-five injury cases were immediately diagnosed after head impact. For these cases, peak linear acceleration and HIC15 were most sensitive to immediately diagnosed concussion (area under the curve = 0.983). Peak rotational acceleration was less sensitive to diagnosed injury than all other kinematic measures (P = 0.01), which are derived from linear acceleration (peak linear, HIC15, Gadd severity index, and Δv). Players sustained more impacts and impacts of higher severity on days of diagnosed concussion than on days without diagnosed concussion. In addition, of historical measures of impact severity, those associated with peak linear acceleration are the best predictors of immediately diagnosed concussion.

Head Impact Exposure Sustained by Football Players on Days of Diagnosed Concussion

PubMed Central

Beckwith, Jonathan G.; Greenwald, Richard M.; Chu, Jeffrey J.; Crisco, Joseph J.; Rowson, Steven; Duma, Stefan M.; Broglio, Steven P.; McAllister, Thomas W.; Guskiewicz, Kevin M.; Mihalik, Jason P.; Anderson, Scott; Schnebel, Brock; Brolinson, P. Gunnar; Collins, Michael W.

2012-01-01

Purpose This study compares the frequency and severity of head impacts sustained by football players on days with and without diagnosed concussion and to identify the sensitivity and specificity of single impact severity measures to diagnosed injury. Methods 1,208 players from eight collegiate and six high school football teams wore instrumented helmets to measure head impacts during all team sessions, of which 95 players were diagnosed with concussion. Eight players sustained two injuries and one three, providing 105 injury cases. Measures of head kinematics (peak linear and rotational acceleration, Gadd Severity Index (GSI), Head Injury Criteria (HIC15), change in head velocity (Δv)) and the number of head impacts sustained by individual players were compared between days with and without diagnosed concussion. Receiver operator characteristic curves were generated to evaluate the sensitivity and specificity of each kinematic measure to diagnosed concussion using only those impacts that directly preceded diagnosis. Results Players sustained a higher frequency of impacts and impacts with more severe kinematic properties on days of diagnosed concussion than on days without diagnosed concussion. Forty-five injury cases were immediately diagnosed following head impact. For these cases, peak linear acceleration and HIC15 were most sensitive to immediately diagnosed concussion (AUC = 0.983). Peak rotational acceleration was less sensitive to diagnosed injury than all other kinematic measures (p = 0.01) which are derived from linear acceleration (peak linear, HIC15, GSI, and Δv). Conclusions Players sustain more impacts and impacts of higher severity on days of diagnosed concussion than on days without diagnosed concussion. Additionally, of historical measures of impact severity, those associated with peak linear acceleration are the best predictors of immediately diagnosed concussion. PMID:23135363

The Synthesis and Structural Characterization of Graft Copolymers Composed of γ-PGA Backbone and Oligoesters Pendant Chains

NASA Astrophysics Data System (ADS)

Kwiecień, Iwona; Radecka, Iza; Kowalczuk, Marek; Jelonek, Katarzyna; Orchel, Arkadiusz; Adamus, Grażyna

2017-10-01

The novel copolymers composed of poly-γ-glutamic acid (γ-PGA) and oligoesters have been developed. The structures of the obtained copolymers including variety of end groups were determined at the molecular level with the aid of electrospray ionization multistage mass spectrometry (ESI-MSn). The fragmentation experiment performed for the selected sodium adducts of the copolymers confirmed that the developed methods lead to the formation of graft copolymers composed of poly-γ-glutamic acid (γ-PGA) backbone and oligoesters pendant chains. Moreover, it was established that fragmentation of selected sodium adducts of graft copolymers proceeded via random breakage of amide bonds along the backbone and ester bonds of the oligoesters pendant chains. Considering potential applications of the synthesized copolymers in the area of biomaterials, the hydrolytic degradation under laboratory conditions and in vitro cytotoxicity tests were performed. The ESI-MSn technique applied in this study has been proven to be a useful tool in structural studies of novel graft copolymers as well as their degradation products. [Figure not available: see fulltext.

Blend-modification of soy protein/lauric acid edible films using polysaccharides.

PubMed

Pan, Hongyang; Jiang, Bo; Chen, Jie; Jin, Zhengyu

2014-05-15

Different types of polysaccharides (propyleneglycol alginate (PGA), pectin, carrageenan and aloe polysaccharide) were incorporated into soy protein isolate (SPI)/lauric acid (La) films using a co-drying process or by direct addition to form biodegradable composite films with modified water vapour permeability (WVP) and mechanical properties. The WVP of SPI/La/polysaccharide films decreased when polysaccharides were added using the co-drying process, regardless of the type of polysaccharide. The tensile strength of SPI/La film was increased by the addition of polysaccharides, and the percentage elongation at break was increased by incorporating PGA using the co-drying process. Regarding oxygen-barrier performance, no notable differences were observed between the SPI/La and SPI/La/polysaccharide films. The most significant improvement was observed by blending PGA, with the co-dried preparation exhibiting better properties than the direct-addition preparation. Scanning electron microscopy (SEM) revealed that the microstructures of the films are the basis for the differences in the barrier and mechanical properties of the modified blends of SPI, polysaccharides and La. Copyright © 2013 Elsevier Ltd. All rights reserved.