Science.gov

Sample records for accretion prediction code

  1. Users Manual for the NASA Lewis Ice Accretion Prediction Code (LEWICE)

    NASA Technical Reports Server (NTRS)

    Ruff, Gary A.; Berkowitz, Brian M.

    1990-01-01

    LEWICE is an ice accretion prediction code that applies a time-stepping procedure to calculate the shape of an ice accretion. The potential flow field is calculated in LEWICE using the Douglas Hess-Smith 2-D panel code (S24Y). This potential flow field is then used to calculate the trajectories of particles and the impingement points on the body. These calculations are performed to determine the distribution of liquid water impinging on the body, which then serves as input to the icing thermodynamic code. The icing thermodynamic model is based on the work of Messinger, but contains several major modifications and improvements. This model is used to calculate the ice growth rate at each point on the surface of the geometry. By specifying an icing time increment, the ice growth rate can be interpreted as an ice thickness which is added to the body, resulting in the generation of new coordinates. This procedure is repeated, beginning with the potential flow calculations, until the desired icing time is reached. The operation of LEWICE is illustrated through the use of five examples. These examples are representative of the types of applications expected for LEWICE. All input and output is discussed, along with many of the diagnostic messages contained in the code. Several error conditions that may occur in the code for certain icing conditions are identified, and a course of action is recommended. LEWICE has been used to calculate a variety of ice shapes, but should still be considered a research code. The code should be exercised further to identify any shortcomings and inadequacies. Any modifications identified as a result of these cases, or of additional experimental results, should be incorporated into the model. Using it as a test bed for improvements to the ice accretion model is one important application of LEWICE.

  2. User's manual for the NASA Lewis ice accretion/heat transfer prediction code with electrothermal deicer input

    NASA Technical Reports Server (NTRS)

    Masiulaniec, Konstanty C.; Wright, William B.

    1994-01-01

    A version of LEWICE has been developed that incorporates a recently developed electrothermal deicer code, developed at the University of Toledo by William B. Wright. This was accomplished, in essence, by replacing a subroutine in LEWICE, called EBAL, which balanced the energies at the ice surface, with a subroutine called UTICE. UTICE performs this same energy balance, as well as handles all the time-timperature transients below the ice surface, for all of the layers of a composite blade as well as the ice layer itself. This new addition is set up in such a fashion that a user may specify any number of heaters, any heater chordwise length, and any heater gap desired. The heaters may be fired in unison, or they may be cycled with periods independent of each other. The heater intensity may also be varied. In addition, the user may specify any number of layers and thicknesses depthwise into the blade. Thus, the new addition has maximum flexibility in modeling virtually any electrothermal deicer installed into any airfoil. It should be noted that the model simulates both shedding and runback. With the runback capability, it can simulate the anti-icing mode of heater performance, as well as detect icing downstream of the heaters due to runback in unprotected portions of the airfoil. This version of LEWICE can be run in three modes. In mode 1, no conduction heat transfer is modeled (which would be equivalent to the original version of LEWICE). In mode 2, all heat transfer is considered due to conduction but no heaters are firing. In mode 3, conduction heat transfer where the heaters are engaged is modeled, with subsequent ice shedding. When run in the first mode, there is virtually identical agreement with the original version of LEWICE in the prediction of accreted ice shapes. The code may be run in the second mode to determine the effects of conduction on the ice accretion process.

  3. Update to the NASA Lewis Ice Accretion Code LEWICE

    NASA Technical Reports Server (NTRS)

    Wright, William B.

    1994-01-01

    This report is intended as an update to NASA CR-185129 'User's Manual for the NASA Lewis Ice Accretion Prediction Code (LEWICE).' It describes modifications and improvements made to this code as well as changes to the input and output files, interactive input, and graphics output. The comparison of this code to experimental data is shown to have improved as a result of these modifications.

  4. Users manual for the improved NASA Lewis ice accretion code LEWICE 1.6

    NASA Technical Reports Server (NTRS)

    Wright, William B.

    1995-01-01

    This report is intended as an update/replacement to NASA CR 185129 'User's Manual for the NASALewis Ice Accretion Prediction Code (LEWICE)' and as an update to NASA CR 195387 'Update to the NASA Lewis Ice Accretion Code LEWICE'. In addition to describing the changes specifically made for this version, information from previous manuals will be duplicated so that the user will not need three manuals to use this code.

  5. Aeroacoustic Prediction Codes

    NASA Technical Reports Server (NTRS)

    Gliebe, P; Mani, R.; Shin, H.; Mitchell, B.; Ashford, G.; Salamah, S.; Connell, S.; Huff, Dennis (Technical Monitor)

    2000-01-01

    This report describes work performed on Contract NAS3-27720AoI 13 as part of the NASA Advanced Subsonic Transport (AST) Noise Reduction Technology effort. Computer codes were developed to provide quantitative prediction, design, and analysis capability for several aircraft engine noise sources. The objective was to provide improved, physics-based tools for exploration of noise-reduction concepts and understanding of experimental results. Methods and codes focused on fan broadband and 'buzz saw' noise and on low-emissions combustor noise and compliment work done by other contractors under the NASA AST program to develop methods and codes for fan harmonic tone noise and jet noise. The methods and codes developed and reported herein employ a wide range of approaches, from the strictly empirical to the completely computational, with some being semiempirical analytical, and/or analytical/computational. Emphasis was on capturing the essential physics while still considering method or code utility as a practical design and analysis tool for everyday engineering use. Codes and prediction models were developed for: (1) an improved empirical correlation model for fan rotor exit flow mean and turbulence properties, for use in predicting broadband noise generated by rotor exit flow turbulence interaction with downstream stator vanes: (2) fan broadband noise models for rotor and stator/turbulence interaction sources including 3D effects, noncompact-source effects. directivity modeling, and extensions to the rotor supersonic tip-speed regime; (3) fan multiple-pure-tone in-duct sound pressure prediction methodology based on computational fluid dynamics (CFD) analysis; and (4) low-emissions combustor prediction methodology and computer code based on CFD and actuator disk theory. In addition. the relative importance of dipole and quadrupole source mechanisms was studied using direct CFD source computation for a simple cascadeigust interaction problem, and an empirical combustor

  6. [Predicting Spectra of Accretion Disks Around Galactic Black Holes

    NASA Technical Reports Server (NTRS)

    Krolik, Julian H.

    2004-01-01

    The purpose of this grant was to construct detailed atmosphere solutions in order to predict the spectra of accretion disks around Galactic black holes. Our plan of action was to take an existing disk atmosphere code (TLUSTY, created by Ivan Hubeny) and introduce those additional physical processes necessary to make it applicable to disks of this variety. These modifications include: treating Comptonization; introducing continuous opacity due to heavy elements; incorporating line opacity due to heavy elements; adopting a disk structure that reflects readjustments due to radiation pressure effects; and injecting heat via a physically-plausible vertical distribution.

  7. DRA/NASA/ONERA Collaboration on Icing Research. Part 2; Prediction of Airfoil Ice Accretion

    NASA Technical Reports Server (NTRS)

    Wright, William B.; Gent, R. W.; Guffond, Didier

    1997-01-01

    This report presents results from a joint study by DRA, NASA, and ONERA for the purpose of comparing, improving, and validating the aircraft icing computer codes developed by each agency. These codes are of three kinds: (1) water droplet trajectory prediction, (2) ice accretion modeling, and (3) transient electrothermal deicer analysis. In this joint study, the agencies compared their code predictions with each other and with experimental results. These comparison exercises were published in three technical reports, each with joint authorship. DRA published and had first authorship of Part 1 - Droplet Trajectory Calculations, NASA of Part 2 - Ice Accretion Prediction, and ONERA of Part 3 - Electrothermal Deicer Analysis. The results cover work done during the period from August 1986 to late 1991. As a result, all of the information in this report is dated. Where necessary, current information is provided to show the direction of current research. In this present report on ice accretion, each agency predicted ice shapes on two dimensional airfoils under icing conditions for which experimental ice shapes were available. In general, all three codes did a reasonable job of predicting the measured ice shapes. For any given experimental condition, one of the three codes predicted the general ice features (i.e., shape, impingement limits, mass of ice) somewhat better than did the other two. However, no single code consistently did better than the other two over the full range of conditions examined, which included rime, mixed, and glaze ice conditions. In several of the cases, DRA showed that the user's knowledge of icing can significantly improve the accuracy of the code prediction. Rime ice predictions were reasonably accurate and consistent among the codes, because droplets freeze on impact and the freezing model is simple. Glaze ice predictions were less accurate and less consistent among the codes, because the freezing model is more complex and is critically

  8. Dopamine reward prediction error coding.

    PubMed

    Schultz, Wolfram

    2016-03-01

    Reward prediction errors consist of the differences between received and predicted rewards. They are crucial for basic forms of learning about rewards and make us strive for more rewards-an evolutionary beneficial trait. Most dopamine neurons in the midbrain of humans, monkeys, and rodents signal a reward prediction error; they are activated by more reward than predicted (positive prediction error), remain at baseline activity for fully predicted rewards, and show depressed activity with less reward than predicted (negative prediction error). The dopamine signal increases nonlinearly with reward value and codes formal economic utility. Drugs of addiction generate, hijack, and amplify the dopamine reward signal and induce exaggerated, uncontrolled dopamine effects on neuronal plasticity. The striatum, amygdala, and frontal cortex also show reward prediction error coding, but only in subpopulations of neurons. Thus, the important concept of reward prediction errors is implemented in neuronal hardware.

  9. Dopamine reward prediction error coding

    PubMed Central

    Schultz, Wolfram

    2016-01-01

    Reward prediction errors consist of the differences between received and predicted rewards. They are crucial for basic forms of learning about rewards and make us strive for more rewards—an evolutionary beneficial trait. Most dopamine neurons in the midbrain of humans, monkeys, and rodents signal a reward prediction error; they are activated by more reward than predicted (positive prediction error), remain at baseline activity for fully predicted rewards, and show depressed activity with less reward than predicted (negative prediction error). The dopamine signal increases nonlinearly with reward value and codes formal economic utility. Drugs of addiction generate, hijack, and amplify the dopamine reward signal and induce exaggerated, uncontrolled dopamine effects on neuronal plasticity. The striatum, amygdala, and frontal cortex also show reward prediction error coding, but only in subpopulations of neurons. Thus, the important concept of reward prediction errors is implemented in neuronal hardware. PMID:27069377

  10. Global Time Dependent Solutions of Stochastically Driven Standard Accretion Disks: Development of Hydrodynamical Code

    NASA Astrophysics Data System (ADS)

    Wani, Naveel; Maqbool, Bari; Iqbal, Naseer; Misra, Ranjeev

    2016-07-01

    X-ray binaries and AGNs are powered by accretion discs around compact objects, where the x-rays are emitted from the inner regions and uv emission arise from the relatively cooler outer parts. There has been an increasing evidence that the variability of the x-rays in different timescales is caused by stochastic fluctuations in the accretion disc at different radii. These fluctuations although arise in the outer parts of the disc but propagate inwards to give rise to x-ray variability and hence provides a natural connection between the x-ray and uv variability. There are analytical expressions to qualitatively understand the effect of these stochastic variabilities, but quantitative predictions are only possible by a detailed hydrodynamical study of the global time dependent solution of standard accretion disc. We have developed numerical efficient code (to incorporate all these effects), which considers gas pressure dominated solutions and stochastic fluctuations with the inclusion of boundary effect of the last stable orbit.

  11. Predictive coding of multisensory timing

    PubMed Central

    Shi, Zhuanghua; Burr, David

    2016-01-01

    The sense of time is foundational for perception and action, yet it frequently departs significantly from physical time. In the paper we review recent progress on temporal contextual effects, multisensory temporal integration, temporal recalibration, and related computational models. We suggest that subjective time arises from minimizing prediction errors and adaptive recalibration, which can be unified in the framework of predictive coding, a framework rooted in Helmholtz’s ‘perception as inference’. PMID:27695705

  12. Ice Accretion Prediction on Wind Turbines and Consequent Power Losses

    NASA Astrophysics Data System (ADS)

    Yirtici, Ozcan; Tuncer, Ismail H.; Ozgen, Serkan

    2016-09-01

    Ice accretion on wind turbine blades modifies the sectional profiles and causes alteration in the aerodynamic characteristic of the blades. The objective of this study is to determine performance losses on wind turbines due to the formation of ice in cold climate regions and mountainous areas where wind energy resources are found. In this study, the Blade Element Momentum method is employed together with an ice accretion prediction tool in order to estimate the ice build-up on wind turbine blades and the energy production for iced and clean blades. The predicted ice shapes of the various airfoil profiles are validated with the experimental data and it is shown that the tool developed is promising to be used in the prediction of power production losses of wind turbines.

  13. Neural Elements for Predictive Coding

    PubMed Central

    Shipp, Stewart

    2016-01-01

    Predictive coding theories of sensory brain function interpret the hierarchical construction of the cerebral cortex as a Bayesian, generative model capable of predicting the sensory data consistent with any given percept. Predictions are fed backward in the hierarchy and reciprocated by prediction error in the forward direction, acting to modify the representation of the outside world at increasing levels of abstraction, and so to optimize the nature of perception over a series of iterations. This accounts for many ‘illusory’ instances of perception where what is seen (heard, etc.) is unduly influenced by what is expected, based on past experience. This simple conception, the hierarchical exchange of prediction and prediction error, confronts a rich cortical microcircuitry that is yet to be fully documented. This article presents the view that, in the current state of theory and practice, it is profitable to begin a two-way exchange: that predictive coding theory can support an understanding of cortical microcircuit function, and prompt particular aspects of future investigation, whilst existing knowledge of microcircuitry can, in return, influence theoretical development. As an example, a neural inference arising from the earliest formulations of predictive coding is that the source populations of forward and backward pathways should be completely separate, given their functional distinction; this aspect of circuitry – that neurons with extrinsically bifurcating axons do not project in both directions – has only recently been confirmed. Here, the computational architecture prescribed by a generalized (free-energy) formulation of predictive coding is combined with the classic ‘canonical microcircuit’ and the laminar architecture of hierarchical extrinsic connectivity to produce a template schematic, that is further examined in the light of (a) updates in the microcircuitry of primate visual cortex, and (b) rapid technical advances made possible by

  14. Users manual for the NASA Lewis three-dimensional ice accretion code (LEWICE 3D)

    NASA Technical Reports Server (NTRS)

    Bidwell, Colin S.; Potapczuk, Mark G.

    1993-01-01

    A description of the methodology, the algorithms, and the input and output data along with an example case for the NASA Lewis 3D ice accretion code (LEWICE3D) has been produced. The manual has been designed to help the user understand the capabilities, the methodologies, and the use of the code. The LEWICE3D code is a conglomeration of several codes for the purpose of calculating ice shapes on three-dimensional external surfaces. A three-dimensional external flow panel code is incorporated which has the capability of calculating flow about arbitrary 3D lifting and nonlifting bodies with external flow. A fourth order Runge-Kutta integration scheme is used to calculate arbitrary streamlines. An Adams type predictor-corrector trajectory integration scheme has been included to calculate arbitrary trajectories. Schemes for calculating tangent trajectories, collection efficiencies, and concentration factors for arbitrary regions of interest for single droplets or droplet distributions have been incorporated. A LEWICE 2D based heat transfer algorithm can be used to calculate ice accretions along surface streamlines. A geometry modification scheme is incorporated which calculates the new geometry based on the ice accretions generated at each section of interest. The three-dimensional ice accretion calculation is based on the LEWICE 2D calculation. Both codes calculate the flow, pressure distribution, and collection efficiency distribution along surface streamlines. For both codes the heat transfer calculation is divided into two regions, one above the stagnation point and one below the stagnation point, and solved for each region assuming a flat plate with pressure distribution. Water is assumed to follow the surface streamlines, hence starting at the stagnation zone any water that is not frozen out at a control volume is assumed to run back into the next control volume. After the amount of frozen water at each control volume has been calculated the geometry is modified by

  15. GR-AMRVAC code applications: accretion onto compact objects, boson stars versus black holes

    NASA Astrophysics Data System (ADS)

    Meliani, Z.; Grandclément, P.; Casse, F.; Vincent, F. H.; Straub, O.; Dauvergne, F.

    2016-08-01

    In the close vicinity of a compact object strong gravity imprints its signature onto matter. Systems that contain at least one compact object are observed to exhibit extreme physical properties and typically emit highly energetic radiation. The nature of the compact objects that produce the strongest gravitational fields is to date not settled. General relativistic numerical simulations of fluid dynamics around black holes, neutron stars, and other compact objects such as boson stars (BSs) may give invaluable insights into this fundamental question. In order to study the behavior of fluid in the strong gravity regime of an arbitrary compact object we develop a new general relativistic hydrodynamics code. To this end we extend the existing versatile adaptive mesh refinement code MPI-AMRVAC into a general relativistic hydrodynamics framework and adapt it for the use of numerically given spacetime metrics. In the present article we study accretion flows in the vicinity of various types of BSs whose numerical metrics are calculated by the KADATH spectral solver library. We design specific tests to check the reliability of any code intending to study BSs and compare the solutions with those obtained in the context of Schwarzschild black holes. We perform the first ever general relativistic hydrodynamical simulations of gas accretion by a BS. The behavior of matter at small distances from the center of a BS differs notably from the black hole case. In particular we demonstrate that in the context of Bondi spherical accretion the mass accretion rate onto non-rotating BSs remains constant whereas it increases for Schwarzschild black holes. We also address the scenario of non-spherical accretion onto BSs and show that this may trigger mass ejection from the interior of the BS. This striking feature opens the door to forthcoming investigations regarding accretion-ejection flows around such types of compact objects.

  16. Canonical microcircuits for predictive coding

    PubMed Central

    Bastos, Andre M.; Usrey, W. Martin; Adams, Rick A.; Mangun, George R.; Fries, Pascal; Friston, Karl J.

    2013-01-01

    Summary This review considers the influential notion of a canonical (cortical) microcircuit in light of recent theories about neuronal processing. Specifically, we conciliate quantitative studies of microcircuitry and the functional logic of neuronal computations. We revisit the established idea that message passing among hierarchical cortical areas implements a form of Bayesian inference – paying careful attention to the implications for intrinsic connections among neuronal populations. By deriving canonical forms for these computations, one can associate specific neuronal populations with specific computational roles. This analysis discloses a remarkable correspondence between the microcircuitry of the cortical column and the connectivity implied by predictive coding. Furthermore, it provides some intuitive insights into the functional asymmetries between feedforward and feedback connections and the characteristic frequencies over which they operate. PMID:23177956

  17. Free-floating planets from core accretion theory: microlensing predictions

    NASA Astrophysics Data System (ADS)

    Ma, Sizheng; Mao, Shude; Ida, Shigeru; Zhu, Wei; Lin, Douglas N. C.

    2016-09-01

    We calculate the microlensing event rate and typical time-scales for the free-floating planet (FFP) population that is predicted by the core accretion theory of planet formation. The event rate is found to be ˜1.8 × 10-3 of that for the stellar population. While the stellar microlensing event time-scale peaks at around 20 d, the median time-scale for FFP events (˜0.1 d) is much shorter. Our values for the event rate and the median time-scale are significantly smaller than those required to explain the Sumi et al. result, by factors of ˜13 and ˜16, respectively. The inclusion of planets at wide separations does not change the results significantly. This discrepancy may be too significant for standard versions of both the core accretion theory and the gravitational instability model to explain satisfactorily. Therefore, either a modification to the planet formation theory is required or other explanations to the excess of short-time-scale microlensing events are needed. Our predictions can be tested by ongoing microlensing experiment such as Korean Microlensing Telescope Network, and by future satellite missions such as WFIRST and Euclid.

  18. A review of predictive coding algorithms.

    PubMed

    Spratling, M W

    2017-03-01

    Predictive coding is a leading theory of how the brain performs probabilistic inference. However, there are a number of distinct algorithms which are described by the term "predictive coding". This article provides a concise review of these different predictive coding algorithms, highlighting their similarities and differences. Five algorithms are covered: linear predictive coding which has a long and influential history in the signal processing literature; the first neuroscience-related application of predictive coding to explaining the function of the retina; and three versions of predictive coding that have been proposed to model cortical function. While all these algorithms aim to fit a generative model to sensory data, they differ in the type of generative model they employ, in the process used to optimise the fit between the model and sensory data, and in the way that they are related to neurobiology.

  19. Predictive depth coding of wavelet transformed images

    NASA Astrophysics Data System (ADS)

    Lehtinen, Joonas

    1999-10-01

    In this paper, a new prediction based method, predictive depth coding, for lossy wavelet image compression is presented. It compresses a wavelet pyramid composition by predicting the number of significant bits in each wavelet coefficient quantized by the universal scalar quantization and then by coding the prediction error with arithmetic coding. The adaptively found linear prediction context covers spatial neighbors of the coefficient to be predicted and the corresponding coefficients on lower scale and in the different orientation pyramids. In addition to the number of significant bits, the sign and the bits of non-zero coefficients are coded. The compression method is tested with a standard set of images and the results are compared with SFQ, SPIHT, EZW and context based algorithms. Even though the algorithm is very simple and it does not require any extra memory, the compression results are relatively good.

  20. Numerical simulation of the Hall effect in magnetized accretion disks with the Pluto code

    NASA Astrophysics Data System (ADS)

    Nakhaei, Mohammad; Safaei, Ghasem; Abbassi, Shahram

    2014-01-01

    We investigate the Hall effect in a standard magnetized accretion disk which is accompanied by dissipation due to viscosity and magnetic resistivity. By considering an initial magnetic field, using the PLUTO code, we perform a numerical magnetohydrodynamic simulation in order to study the effect of Hall diffusion on the physical structure of the disk. Current density and temperature of the disk are significantly modified by Hall diffusion, but the global structure of the disk is not substantially affected. The changes in the current densities and temperature of the disk lead to a modification in the disk luminosity and radiation.

  1. Code-excited linear predictive coding of multispectral MR images

    NASA Astrophysics Data System (ADS)

    Hu, Jian-Hong; Wang, Yao; Cahill, Patrick

    1996-02-01

    This paper reports a multispectral code excited linear predictive coding method for the compression of well-registered multispectral MR images. Different linear prediction models and the adaptation schemes have been compared. The method which uses forward adaptive autoregressive (AR) model has proven to achieve a good compromise between performance, complexity and robustness. This approach is referred to as the MFCELP method. Given a set of multispectral images, the linear predictive coefficients are updated over non-overlapping square macroblocks. Each macro-block is further divided into several micro-blocks and, the best excitation signals for each microblock are determined through an analysis-by-synthesis procedure. To satisfy the high quality requirement for medical images, the error between the original images and the synthesized ones are further specified using a vector quantizer. The MFCELP method has been applied to 26 sets of clinical MR neuro images (20 slices/set, 3 spectral bands/slice, 256 by 256 pixels/image, 12 bits/pixel). It provides a significant improvement over the discrete cosine transform (DCT) based JPEG method, a wavelet transform based embedded zero-tree wavelet (EZW) coding method, as well as the MSARMA method we developed before.

  2. Fast prediction algorithm for multiview video coding

    NASA Astrophysics Data System (ADS)

    Abdelazim, Abdelrahman; Mein, Stephen James; Varley, Martin Roy; Ait-Boudaoud, Djamel

    2013-03-01

    The H.264/multiview video coding (MVC) standard has been developed to enable efficient coding for three-dimensional and multiple viewpoint video sequences. The inter-view statistical dependencies are utilized and an inter-view prediction is employed to provide more efficient coding; however, this increases the overall encoding complexity. Motion homogeneity is exploited here to selectively enable inter-view prediction, and to reduce complexity in the motion estimation (ME) and the mode selection processes. This has been accomplished by defining situations that relate macro-blocks' motion characteristics to the mode selection and the inter-view prediction processes. When comparing the proposed algorithm to the H.264/MVC reference software and other recent work, the experimental results demonstrate a significant reduction in ME time while maintaining similar rate-distortion performance.

  3. The Influence of Accretion Rate and Metallicity on Thermonuclear Bursts: Predictions from KEPLER Models

    NASA Astrophysics Data System (ADS)

    Lampe, Nathanael; Heger, Alexander; Galloway, Duncan K.

    2016-03-01

    Using the KEPLER hydrodynamics code, 464 models of thermonuclear X-ray bursters were performed across a range of accretion rates and compositions. We present the library of simulated burst profiles from this sample, and examine variations in the simulated light curve for different model conditions. We find that the recurrence time varies as a power law against accretion rate, and measure its slope while mixed H/He burning is occurring for a range of metallicities, finding the power law gradient to vary from η =1.1 to 1.24. We identify the accretion rates at which mixed H/He burning stops and a transition occurs to different burning regimes. We explore how varying the accretion rate and metallicity affects burst morphology in both the rise and tail.

  4. User Manual for the NASA Glenn Ice Accretion Code LEWICE: Version 2.0

    NASA Technical Reports Server (NTRS)

    Wright, William B.

    1999-01-01

    A research project is underway at NASA Glenn to produce a computer code which can accurately predict ice growth under a wide range of meteorological conditions for any aircraft surface. This report will present a description of the code inputs and outputs from version 2.0 of this code, which is called LEWICE. This version differs from previous releases due to its robustness and its ability to reproduce results accurately for different spacing and time step criteria across computing platform. It also differs in the extensive effort undertaken to compare the results against the database of ice shapes which have been generated in the NASA Glenn Icing Research Tunnel (IRT) 1. This report will only describe the features of the code related to the use of the program. The report will not describe the inner working of the code or the physical models used. This information is available in the form of several unpublished documents which will be collectively referred to as a Programmers Manual for LEWICE 2 in this report. These reports are intended as an update/replacement for all previous user manuals of LEWICE. In addition to describing the changes and improvements made for this version, information from previous manuals may be duplicated so that the user will not need to consult previous manuals to use this code.

  5. Predictions for microlensing planetary events from core accretion theory

    SciTech Connect

    Zhu, Wei; Mao, Shude; Penny, Matthew; Gould, Andrew; Gendron, Rieul

    2014-06-10

    We conduct the first microlensing simulation in the context of a planet formation model. The planet population is taken from the Ida and Lin core accretion model for 0.3 M {sub ☉} stars. With 6690 microlensing events, we find that for a simplified Korea Microlensing Telescopes Network (KMTNet), the fraction of planetary events is 2.9%, out of which 5.5% show multiple-planet signatures. The numbers of super-Earths, super-Neptunes, and super-Jupiters detected are expected to be almost equal. Our simulation shows that high-magnification events and massive planets are favored by planet detections, which is consistent with previous expectation. However, we notice that extremely high-magnification events are less sensitive to planets, which is possibly because the 10 minute sampling of KMTNet is not intensive enough to capture the subtle anomalies that occur near the peak. This suggests that while KMTNet observations can be systematically analyzed without reference to any follow-up data, follow-up observations will be essential in extracting the full science potential of very high magnification events. The uniformly high-cadence observations expected for KMTNet also result in ∼55% of all detected planets not being caustic crossing, and more low-mass planets even down to Mars mass being detected via planetary caustics. We also find that the distributions of orbital inclinations and planet mass ratios in multiple-planet events agree with the intrinsic distributions.

  6. Predictions for Microlensing Planetary Events from Core Accretion Theory

    NASA Astrophysics Data System (ADS)

    Zhu, Wei; Penny, Matthew; Mao, Shude; Gould, Andrew; Gendron, Rieul

    2014-06-01

    We conduct the first microlensing simulation in the context of a planet formation model. The planet population is taken from the Ida & Lin core accretion model for 0.3 M ⊙ stars. With 6690 microlensing events, we find that for a simplified Korea Microlensing Telescopes Network (KMTNet), the fraction of planetary events is 2.9%, out of which 5.5% show multiple-planet signatures. The numbers of super-Earths, super-Neptunes, and super-Jupiters detected are expected to be almost equal. Our simulation shows that high-magnification events and massive planets are favored by planet detections, which is consistent with previous expectation. However, we notice that extremely high-magnification events are less sensitive to planets, which is possibly because the 10 minute sampling of KMTNet is not intensive enough to capture the subtle anomalies that occur near the peak. This suggests that while KMTNet observations can be systematically analyzed without reference to any follow-up data, follow-up observations will be essential in extracting the full science potential of very high magnification events. The uniformly high-cadence observations expected for KMTNet also result in ~55% of all detected planets not being caustic crossing, and more low-mass planets even down to Mars mass being detected via planetary caustics. We also find that the distributions of orbital inclinations and planet mass ratios in multiple-planet events agree with the intrinsic distributions.

  7. Predictive Coding Strategies for Developmental Neurorobotics

    PubMed Central

    Park, Jun-Cheol; Lim, Jae Hyun; Choi, Hansol; Kim, Dae-Shik

    2012-01-01

    In recent years, predictive coding strategies have been proposed as a possible means by which the brain might make sense of the truly overwhelming amount of sensory data available to the brain at any given moment of time. Instead of the raw data, the brain is hypothesized to guide its actions by assigning causal beliefs to the observed error between what it expects to happen and what actually happens. In this paper, we present a variety of developmental neurorobotics experiments in which minimalist prediction error-based encoding strategies are utilize to elucidate the emergence of infant-like behavior in humanoid robotic platforms. Our approaches will be first naively Piagian, then move onto more Vygotskian ideas. More specifically, we will investigate how simple forms of infant learning, such as motor sequence generation, object permanence, and imitation learning may arise if minimizing prediction errors are used as objective functions. PMID:22586416

  8. Visual mismatch negativity: a predictive coding view

    PubMed Central

    Stefanics, Gábor; Kremláček, Jan; Czigler, István

    2014-01-01

    An increasing number of studies investigate the visual mismatch negativity (vMMN) or use the vMMN as a tool to probe various aspects of human cognition. This paper reviews the theoretical underpinnings of vMMN in the light of methodological considerations and provides recommendations for measuring and interpreting the vMMN. The following key issues are discussed from the experimentalist's point of view in a predictive coding framework: (1) experimental protocols and procedures to control “refractoriness” effects; (2) methods to control attention; (3) vMMN and veridical perception. PMID:25278859

  9. User Manual for the NASA Glenn Ice Accretion Code LEWICE. Version 2.2.2

    NASA Technical Reports Server (NTRS)

    Wright, William B.

    2002-01-01

    A research project is underway at NASA Glenn to produce a computer code which can accurately predict ice growth under a wide range of meteorological conditions for any aircraft surface. This report will present a description of the code inputs and outputs from version 2.2.2 of this code, which is called LEWICE. This version differs from release 2.0 due to the addition of advanced thermal analysis capabilities for de-icing and anti-icing applications using electrothermal heaters or bleed air applications. An extensive effort was also undertaken to compare the results against the database of electrothermal results which have been generated in the NASA Glenn Icing Research Tunnel (IRT) as was performed for the validation effort for version 2.0. This report will primarily describe the features of the software related to the use of the program. Appendix A of this report has been included to list some of the inner workings of the software or the physical models used. This information is also available in the form of several unpublished documents internal to NASA. This report is intended as a replacement for all previous user manuals of LEWICE. In addition to describing the changes and improvements made for this version, information from previous manuals may be duplicated so that the user will not need to consult previous manuals to use this code.

  10. The Helicopter Antenna Radiation Prediction Code (HARP)

    NASA Technical Reports Server (NTRS)

    Klevenow, F. T.; Lynch, B. G.; Newman, E. H.; Rojas, R. G.; Scheick, J. T.; Shamansky, H. T.; Sze, K. Y.

    1990-01-01

    The first nine months effort in the development of a user oriented computer code, referred to as the HARP code, for analyzing the radiation from helicopter antennas is described. The HARP code uses modern computer graphics to aid in the description and display of the helicopter geometry. At low frequencies the helicopter is modeled by polygonal plates, and the method of moments is used to compute the desired patterns. At high frequencies the helicopter is modeled by a composite ellipsoid and flat plates, and computations are made using the geometrical theory of diffraction. The HARP code will provide a user friendly interface, employing modern computer graphics, to aid the user to describe the helicopter geometry, select the method of computation, construct the desired high or low frequency model, and display the results.

  11. The PISA Pre-Main Sequence accreting models

    NASA Astrophysics Data System (ADS)

    Tognelli, Emanuele; Prada Moroni, Pier Giorgio; Degl'Innocenti, Scilla

    2013-07-01

    The poster investigates the effect of accretion processes on the evolution of stellar models computed by means of the well tested and updated PROSECCO evolutionary code, under the hypothesis of thin-disk accretion. We analysed the effect on the evolution of the adoption of different parameters as the accretion rate, accretion history, seed mass, and the fraction of the infalling matter energy (alpha_acc) deposed in to the star (accretion energy). We confirm that the most critical parameter is the accretion energy. We show that, depending on alpha_acc the evolution of accreting and non-accreting objects can be completely different, confirming that the adoption of small alpha_acc value (i.e. small accretion energy, cold accretion) produces fainter and more compact models with respect to the ones predicted from non-accreting structures at the same mass and age, models that can not be reconciled with the data available for young objects (i.e. position in the HR diagram, lithium abundances). On the contrary, if a large part of the accretion luminosity is deposed into the star (alpha_acc = 1, hot accretion), at least during the fisrt stages of the accretion phase or during bursts episodes, large radii and luminosities are achievable, with resulting structures much more similar to the non-accreting ones.

  12. Picturewise inter-view prediction selection for multiview video coding

    NASA Astrophysics Data System (ADS)

    Huo, Junyan; Chang, Yilin; Li, Ming; Yang, Haitao

    2010-11-01

    Inter-view prediction is introduced in multiview video coding (MVC) to exploit the inter-view correlation. Statistical analyses show that the coding gain benefited from inter-view prediction is unequal among pictures. On the basis of this observation, a picturewise interview prediction selection scheme is proposed. This scheme employs a novel inter-view prediction selection criterion to determine whether it is necessary to apply inter-view prediction to the current coding picture. This criterion is derived from the available coding information of the temporal reference pictures. Experimental results show that the proposed scheme can improve the performance of MVC with a comprehensive consideration of compression efficiency, computational complexity, and random access ability.

  13. Predictive Bias and Sensitivity in NRC Fuel Performance Codes

    SciTech Connect

    Geelhood, Kenneth J.; Luscher, Walter G.; Senor, David J.; Cunningham, Mitchel E.; Lanning, Donald D.; Adkins, Harold E.

    2009-10-01

    The latest versions of the fuel performance codes, FRAPCON-3 and FRAPTRAN were examined to determine if the codes are intrinsically conservative. Each individual model and type of code prediction was examined and compared to the data that was used to develop the model. In addition, a brief literature search was performed to determine if more recent data have become available since the original model development for model comparison.

  14. Efficient Coding of the Prediction Residual.

    DTIC Science & Technology

    1979-12-27

    Page I. Average of Fundamental and Formant Frequencies and Formant Amplitudes of Vowels by 76 Speakers .. ........... ... 28 II. Representation of IPA...0, 1, ..., M-1 p - Order of the LPC filter F1, F2, ... - Formant frequencies r,(m) - Output of the ith bandpass filter m = 0, 1, ..., M-l; z = 1, 2...correlation coefficients and other parameters that represent the formant frequency characteristics. The other waveform is the prediction residual. Figure

  15. Quasi-Periodic Oscillations and Frequencies in AN Accretion Disk and Comparison with the Numerical Results from Non-Rotating Black Hole Computed by the Grh Code

    NASA Astrophysics Data System (ADS)

    Donmez, Orhan

    The shocked wave created on the accretion disk after different physical phenomena (accretion flows with pressure gradients, star-disk interaction etc.) may be responsible observed Quasi Periodic Oscillations (QPOs) in X-ray binaries. We present the set of characteristics frequencies associated with accretion disk around the rotating and non-rotating black holes for one particle case. These persistent frequencies are results of the rotating pattern in an accretion disk. We compare the frequency's from two different numerical results for fluid flow around the non-rotating black hole with one particle case. The numerical results are taken from Refs. 1 and 2 using fully general relativistic hydrodynamical code with non-selfgravitating disk. While the first numerical result has a relativistic tori around the black hole, the second one includes one-armed spiral shock wave produced from star-disk interaction. Some physical modes presented in the QPOs can be excited in numerical simulation of relativistic tori and spiral waves on the accretion disk. The results of these different dynamical structures on the accretion disk responsible for QPOs are discussed in detail.

  16. Piecewise Mapping in HEVC Lossless Intra-prediction Coding.

    PubMed

    Sanchez, Victor; Auli-Llinas, Francesc; Serra-Sagrista, Joan

    2016-05-19

    The lossless intra-prediction coding modality of the High Efficiency Video Coding (HEVC) standard provides high coding performance while allowing frame-by-frame basis access to the coded data. This is of interest in many professional applications such as medical imaging, automotive vision and digital preservation in libraries and archives. Various improvements to lossless intra-prediction coding have been proposed recently, most of them based on sample-wise prediction using Differential Pulse Code Modulation (DPCM). Other recent proposals aim at further reducing the energy of intra-predicted residual blocks. However, the energy reduction achieved is frequently minimal due to the difficulty of correctly predicting the sign and magnitude of residual values. In this paper, we pursue a novel approach to this energy-reduction problem using piecewise mapping (pwm) functions. Specifically, we analyze the range of values in residual blocks and apply accordingly a pwm function to map specific residual values to unique lower values. We encode appropriate parameters associated with the pwm functions at the encoder, so that the corresponding inverse pwm functions at the decoder can map values back to the same residual values. These residual values are then used to reconstruct the original signal. This mapping is, therefore, reversible and introduces no losses. We evaluate the pwm functions on 4×4 residual blocks computed after DPCM-based prediction for lossless coding of a variety of camera-captured and screen content sequences. Evaluation results show that the pwm functions can attain maximum bit-rate reductions of 5.54% and 28.33% for screen content material compared to DPCM-based and block-wise intra-prediction, respectively. Compared to Intra- Block Copy, piecewise mapping can attain maximum bit-rate reductions of 11.48% for camera-captured material.

  17. Roadmap Toward a Predictive Performance-based Commercial Energy Code

    SciTech Connect

    Rosenberg, Michael I.; Hart, Philip R.

    2014-10-01

    Energy codes have provided significant increases in building efficiency over the last 38 years, since the first national energy model code was published in late 1975. The most commonly used path in energy codes, the prescriptive path, appears to be reaching a point of diminishing returns. The current focus on prescriptive codes has limitations including significant variation in actual energy performance depending on which prescriptive options are chosen, a lack of flexibility for designers and developers, and the inability to handle control optimization that is specific to building type and use. This paper provides a high level review of different options for energy codes, including prescriptive, prescriptive packages, EUI Target, outcome-based, and predictive performance approaches. This paper also explores a next generation commercial energy code approach that places a greater emphasis on performance-based criteria. A vision is outlined to serve as a roadmap for future commercial code development. That vision is based on code development being led by a specific approach to predictive energy performance combined with building specific prescriptive packages that are designed to be both cost-effective and to achieve a desired level of performance. Compliance with this new approach can be achieved by either meeting the performance target as demonstrated by whole building energy modeling, or by choosing one of the prescriptive packages.

  18. A trellis-searched APC (adaptive predictive coding) speech coder

    SciTech Connect

    Malone, K.T. ); Fischer, T.R. . Dept. of Electrical and Computer Engineering)

    1990-01-01

    In this paper we formulate a speech coding system that incorporates trellis coded vector quantization (TCVQ) and adaptive predictive coding (APC). A method for optimizing'' the TCVQ codebooks is presented and experimental results concerning survivor path mergings are reported. Simulation results are given for encoding rates of 16 and 9.6 kbps for a variety of coder parameters. The quality of the encoded speech is deemed excellent at an encoding rate of 16 kbps and very good at 9.6 kbps. 13 refs., 2 figs., 4 tabs.

  19. Analysis of view synthesis prediction architectures in modern coding standards

    NASA Astrophysics Data System (ADS)

    Tian, Dong; Zou, Feng; Lee, Chris; Vetro, Anthony; Sun, Huifang

    2013-09-01

    Depth-based 3D formats are currently being developed as extensions to both AVC and HEVC standards. The availability of depth information facilitates the generation of intermediate views for advanced 3D applications and displays, and also enables more efficient coding of the multiview input data through view synthesis prediction techniques. This paper outlines several approaches that have been explored to realize view synthesis prediction in modern video coding standards such as AVC and HEVC. The benefits and drawbacks of various architectures are analyzed in terms of performance, complexity, and other design considerations. It is hence concluded that block-based VSP prediction for multiview video signals provides attractive coding gains with comparable complexity as traditional motion/disparity compensation.

  20. More About Vector Adaptive/Predictive Coding Of Speech

    NASA Technical Reports Server (NTRS)

    Jedrey, Thomas C.; Gersho, Allen

    1992-01-01

    Report presents additional information about digital speech-encoding and -decoding system described in "Vector Adaptive/Predictive Encoding of Speech" (NPO-17230). Summarizes development of vector adaptive/predictive coding (VAPC) system and describes basic functions of algorithm. Describes refinements introduced enabling receiver to cope with errors. VAPC algorithm implemented in integrated-circuit coding/decoding processors (codecs). VAPC and other codecs tested under variety of operating conditions. Tests designed to reveal effects of various background quiet and noisy environments and of poor telephone equipment. VAPC found competitive with and, in some respects, superior to other 4.8-kb/s codecs and other codecs of similar complexity.

  1. Dream to Predict? REM Dreaming as Prospective Coding

    PubMed Central

    Llewellyn, Sue

    2016-01-01

    The dream as prediction seems inherently improbable. The bizarre occurrences in dreams never characterize everyday life. Dreams do not come true! But assuming that bizarreness negates expectations may rest on a misunderstanding of how the predictive brain works. In evolutionary terms, the ability to rapidly predict what sensory input implies—through expectations derived from discerning patterns in associated past experiences—would have enhanced fitness and survival. For example, food and water are essential for survival, associating past experiences (to identify location patterns) predicts where they can be found. Similarly, prediction may enable predator identification from what would have been only a fleeting and ambiguous stimulus—without prior expectations. To confront the many challenges associated with natural settings, visual perception is vital for humans (and most mammals) and often responses must be rapid. Predictive coding during wake may, therefore, be based on unconscious imagery so that visual perception is maintained and appropriate motor actions triggered quickly. Speed may also dictate the form of the imagery. Bizarreness, during REM dreaming, may result from a prospective code fusing phenomena with the same meaning—within a particular context. For example, if the context is possible predation, from the perspective of the prey two different predators can both mean the same (i.e., immediate danger) and require the same response (e.g., flight). Prospective coding may also prune redundancy from memories, to focus the image on the contextually-relevant elements only, thus, rendering the non-relevant phenomena indeterminate—another aspect of bizarreness. In sum, this paper offers an evolutionary take on REM dreaming as a form of prospective coding which identifies a probabilistic pattern in past events. This pattern is portrayed in an unconscious, associative, sensorimotor image which may support cognition in wake through being mobilized as a

  2. Fast coding unit selection method for high efficiency video coding intra prediction

    NASA Astrophysics Data System (ADS)

    Xiong, Jian

    2013-07-01

    The high efficiency video coding (HEVC) video coding standard under development can achieve higher compression performance than previous standards, such as MPEG-4, H.263, and H.264/AVC. To improve coding performance, a quad-tree coding structure and a robust rate-distortion (RD) optimization technique is used to select an optimum coding mode. Since the RD costs of all possible coding modes are computed to decide an optimum mode, high computational complexity is induced in the encoder. A fast learning-based coding unit (CU) size selection method is presented for HEVC intra prediction. The proposed algorithm is based on theoretical analysis that shows the non-normalized histogram of oriented gradient (n-HOG) can be used to help select CU size. A codebook is constructed offline by clustering n-HOGs of training sequences for each CU size. The optimum size is determined by comparing the n-HOG of the current CU with the learned codebooks. Experimental results show that the CU size selection scheme speeds up intra coding significantly with negligible loss of peak signal-to-noise ratio.

  3. The NASA-LeRC wind turbine sound prediction code

    NASA Technical Reports Server (NTRS)

    Viterna, L. A.

    1981-01-01

    Since regular operation of the DOE/NASA MOD-1 wind turbine began in October 1979 about 10 nearby households have complained of noise from the machine. Development of the NASA-LeRC with turbine sound prediction code began in May 1980 as part of an effort to understand and reduce the noise generated by MOD-1. Tone sound levels predicted with this code are in generally good agreement with measured data taken in the vicinity MOD-1 wind turbine (less than 2 rotor diameters). Comparison in the far field indicates that propagation effects due to terrain and atmospheric conditions may be amplifying the actual sound levels by about 6 dB. Parametric analysis using the code has shown that the predominant contributions to MOD-1 rotor noise are: (1) the velocity deficit in the wake of the support tower; (2) the high rotor speed; and (3) off column operation.

  4. The NASA-LeRC wind turbine sound prediction code

    NASA Technical Reports Server (NTRS)

    Viterna, L. A.

    1981-01-01

    Development of the wind turbine sound prediction code began as part of an effort understand and reduce the noise generated by Mod-1. Tone sound levels predicted with this code are in good agreement with measured data taken in the vicinity Mod-1 wind turbine (less than 2 rotor diameters). Comparison in the far field indicates that propagation effects due to terrain and atmospheric conditions may amplify the actual sound levels by 6 dB. Parametric analysis using the code shows that the predominant contributors to Mod-1 rotor noise are (1) the velocity deficit in the wake of the support tower, (2) the high rotor speed, and (3) off-optimum operation.

  5. Predictive coding of music--brain responses to rhythmic incongruity.

    PubMed

    Vuust, Peter; Ostergaard, Leif; Pallesen, Karen Johanne; Bailey, Christopher; Roepstorff, Andreas

    2009-01-01

    During the last decades, models of music processing in the brain have mainly discussed the specificity of brain modules involved in processing different musical components. We argue that predictive coding offers an explanatory framework for functional integration in musical processing. Further, we provide empirical evidence for such a network in the analysis of event-related MEG-components to rhythmic incongruence in the context of strong metric anticipation. This is seen in a mismatch negativity (MMNm) and a subsequent P3am component, which have the properties of an error term and a subsequent evaluation in a predictive coding framework. There were both quantitative and qualitative differences in the evoked responses in expert jazz musicians compared with rhythmically unskilled non-musicians. We propose that these differences trace a functional adaptation and/or a genetic pre-disposition in experts which allows for a more precise rhythmic prediction.

  6. Swept wing ice accretion modeling

    NASA Technical Reports Server (NTRS)

    Potapczuk, M. G.; Bidwell, C. S.

    1990-01-01

    An effort to develop a three-dimensional ice accretion modeling method is initiated. This first step toward creation of a complete aircraft icing simulation code builds on previously developed methods for calculating three-dimensional flowfields and particle trajectories combined with a two-dimensional ice accretion calculation along coordinate locations corresponding to streamlines. This work is intended as a demonstration of the types of calculations necessary to predict a three-dimensional ice accretion. Results of calculations using the 3D method for a MS-317 swept wing geometry are projected onto a 2D plane normal to the wing leading edge and compared to 2D results for the same geometry. These results indicate that the flowfield over the surface and the particle trajectories differed for the two calculations. This led to lower collection efficiencies, convective heat transfer coefficients, freezing fractions, and ultimately ice accumulation for the 3D calculation.

  7. Reflectance Prediction Modelling for Residual-Based Hyperspectral Image Coding

    PubMed Central

    Xiao, Rui; Gao, Junbin; Bossomaier, Terry

    2016-01-01

    A Hyperspectral (HS) image provides observational powers beyond human vision capability but represents more than 100 times the data compared to a traditional image. To transmit and store the huge volume of an HS image, we argue that a fundamental shift is required from the existing “original pixel intensity”-based coding approaches using traditional image coders (e.g., JPEG2000) to the “residual”-based approaches using a video coder for better compression performance. A modified video coder is required to exploit spatial-spectral redundancy using pixel-level reflectance modelling due to the different characteristics of HS images in their spectral and shape domain of panchromatic imagery compared to traditional videos. In this paper a novel coding framework using Reflectance Prediction Modelling (RPM) in the latest video coding standard High Efficiency Video Coding (HEVC) for HS images is proposed. An HS image presents a wealth of data where every pixel is considered a vector for different spectral bands. By quantitative comparison and analysis of pixel vector distribution along spectral bands, we conclude that modelling can predict the distribution and correlation of the pixel vectors for different bands. To exploit distribution of the known pixel vector, we estimate a predicted current spectral band from the previous bands using Gaussian mixture-based modelling. The predicted band is used as the additional reference band together with the immediate previous band when we apply the HEVC. Every spectral band of an HS image is treated like it is an individual frame of a video. In this paper, we compare the proposed method with mainstream encoders. The experimental results are fully justified by three types of HS dataset with different wavelength ranges. The proposed method outperforms the existing mainstream HS encoders in terms of rate-distortion performance of HS image compression. PMID:27695102

  8. Potential flow analysis of glaze ice accretions on an airfoil

    NASA Technical Reports Server (NTRS)

    Zaguli, R. J.

    1984-01-01

    The results of an analytical/experimental study of the flow fields about an airfoil with leading edge glaze ice accretion shapes are presented. Tests were conducted in the Icing Research Tunnel to measure surface pressure distributions and boundary layer separation reattachment characteristics on a general aviation wing section to which was affixed wooden ice shapes which approximated typical glaze ice accretions. Comparisons were made with predicted pressure distributions using current airfoil analysis codes as well as the Bristow mixed analysis/design airfoil panel code. The Bristow code was also used to predict the separation reattachment dividing streamline by inputting the appropriate experimental surface pressure distribution.

  9. GenDecoder: genetic code prediction for metazoan mitochondria

    PubMed Central

    Abascal, Federico; Zardoya, Rafael; Posada, David

    2006-01-01

    Although the majority of the organisms use the same genetic code to translate DNA, several variants have been described in a wide range of organisms, both in nuclear and organellar systems, many of them corresponding to metazoan mitochondria. These variants are usually found by comparative sequence analyses, either conducted manually or with the computer. Basically, when a particular codon in a query-species is linked to positions for which a specific amino acid is consistently found in other species, then that particular codon is expected to translate as that specific amino acid. Importantly, and despite the simplicity of this approach, there are no available tools to help predicting the genetic code of an organism. We present here GenDecoder, a web server for the characterization and prediction of mitochondrial genetic codes in animals. The analysis of automatic predictions for 681 metazoans aimed us to study some properties of the comparative method, in particular, the relationship among sequence conservation, taxonomic sampling and reliability of assignments. Overall, the method is highly precise (99%), although highly divergent organisms such as platyhelminths are more problematic. The GenDecoder web server is freely available from . PMID:16845034

  10. The multiform motor cortical output: Kinematic, predictive and response coding.

    PubMed

    Sartori, Luisa; Betti, Sonia; Chinellato, Eris; Castiello, Umberto

    2015-09-01

    Observing actions performed by others entails a subliminal activation of primary motor cortex reflecting the components encoded in the observed action. One of the most debated issues concerns the role of this output: Is it a mere replica of the incoming flow of information (kinematic coding), is it oriented to anticipate the forthcoming events (predictive coding) or is it aimed at responding in a suitable fashion to the actions of others (response coding)? The aim of the present study was to disentangle the relative contribution of these three levels and unify them into an integrated view of cortical motor coding. We combined transcranial magnetic stimulation (TMS) and electromyography recordings at different timings to probe the excitability of corticospinal projections to upper and lower limb muscles of participants observing a soccer player performing: (i) a penalty kick straight in their direction and then coming to a full stop, (ii) a penalty kick straight in their direction and then continuing to run, (iii) a penalty kick to the side and then continuing to run. The results show a modulation of the observer's corticospinal excitability in different effectors at different times reflecting a multiplicity of motor coding. The internal replica of the observed action, the predictive activation, and the adaptive integration of congruent and non-congruent responses to the actions of others can coexist in a not mutually exclusive way. Such a view offers reconciliation among different (and apparently divergent) frameworks in action observation literature, and will promote a more complete and integrated understanding of recent findings on motor simulation, motor resonance and automatic imitation.

  11. Multispectral code excited linear prediction coding and its application in magnetic resonance images.

    PubMed

    Hu, J H; Wang, Y; Cahill, P T

    1997-01-01

    This paper reports a multispectral code excited linear prediction (MCELP) method for the compression of multispectral images. Different linear prediction models and adaptation schemes have been compared. The method that uses a forward adaptive autoregressive (AR) model has been proven to achieve a good compromise between performance, complexity, and robustness. This approach is referred to as the MFCELP method. Given a set of multispectral images, the linear predictive coefficients are updated over nonoverlapping three-dimensional (3-D) macroblocks. Each macroblock is further divided into several 3-D micro-blocks, and the best excitation signal for each microblock is determined through an analysis-by-synthesis procedure. The MFCELP method has been applied to multispectral magnetic resonance (MR) images. To satisfy the high quality requirement for medical images, the error between the original image set and the synthesized one is further specified using a vector quantizer. This method has been applied to images from 26 clinical MR neuro studies (20 slices/study, three spectral bands/slice, 256x256 pixels/band, 12 b/pixel). The MFCELP method provides a significant visual improvement over the discrete cosine transform (DCT) based Joint Photographers Expert Group (JPEG) method, the wavelet transform based embedded zero-tree wavelet (EZW) coding method, and the vector tree (VT) coding method, as well as the multispectral segmented autoregressive moving average (MSARMA) method we developed previously.

  12. Efficient temporal and interlayer parameter prediction for weighted prediction in scalable high efficiency video coding

    NASA Astrophysics Data System (ADS)

    Tsang, Sik-Ho; Chan, Yui-Lam; Siu, Wan-Chi

    2017-01-01

    Weighted prediction (WP) is an efficient video coding tool that was introduced since the establishment of the H.264/AVC video coding standard, for compensating the temporal illumination change in motion estimation and compensation. WP parameters, including a multiplicative weight and an additive offset for each reference frame, are required to be estimated and transmitted to the decoder by slice header. These parameters cause extra bits in the coded video bitstream. High efficiency video coding (HEVC) provides WP parameter prediction to reduce the overhead. Therefore, WP parameter prediction is crucial to research works or applications, which are related to WP. Prior art has been suggested to further improve the WP parameter prediction by implicit prediction of image characteristics and derivation of parameters. By exploiting both temporal and interlayer redundancies, we propose three WP parameter prediction algorithms, enhanced implicit WP parameter, enhanced direct WP parameter derivation, and interlayer WP parameter, to further improve the coding efficiency of HEVC. Results show that our proposed algorithms can achieve up to 5.83% and 5.23% bitrate reduction compared to the conventional scalable HEVC in the base layer for SNR scalability and 2× spatial scalability, respectively.

  13. Biocomputational prediction of small non-coding RNAs in Streptomyces

    PubMed Central

    Pánek, Josef; Bobek, Jan; Mikulík, Karel; Basler, Marek; Vohradský, Jiří

    2008-01-01

    Background The first systematic study of small non-coding RNAs (sRNA, ncRNA) in Streptomyces is presented. Except for a few exceptions, the Streptomyces sRNAs, as well as the sRNAs in other genera of the Actinomyces group, have remained unstudied. This study was based on sequence conservation in intergenic regions of Streptomyces, localization of transcription termination factors, and genomic arrangement of genes flanking the predicted sRNAs. Results Thirty-two potential sRNAs in Streptomyces were predicted. Of these, expression of 20 was detected by microarrays and RT-PCR. The prediction was validated by a structure based computational approach. Two predicted sRNAs were found to be terminated by transcription termination factors different from the Rho-independent terminators. One predicted sRNA was identified computationally with high probability as a Streptomyces 6S RNA. Out of the 32 predicted sRNAs, 24 were found to be structurally dissimilar from known sRNAs. Conclusion Streptomyces is the largest genus of Actinomyces, whose sRNAs have not been studied. The Actinomyces is a group of bacterial species with unique genomes and phenotypes. Therefore, in Actinomyces, new unique bacterial sRNAs may be identified. The sequence and structural dissimilarity of the predicted Streptomyces sRNAs demonstrated by this study serve as the first evidence of the uniqueness of Actinomyces sRNAs. PMID:18477385

  14. Sonic boom predictions using a modified Euler code

    NASA Technical Reports Server (NTRS)

    Siclari, Michael J.

    1992-01-01

    The environmental impact of a next generation fleet of high-speed civil transports (HSCT) is of great concern in the evaluation of the commercial development of such a transport. One of the potential environmental impacts of a high speed civilian transport is the sonic boom generated by the aircraft and its effects on the population, wildlife, and structures in the vicinity of its flight path. If an HSCT aircraft is restricted from flying overland routes due to excessive booms, the commercial feasibility of such a venture may be questionable. NASA has taken the lead in evaluating and resolving the issues surrounding the development of a high speed civilian transport through its High-Speed Research Program (HSRP). The present paper discusses the usage of a Computational Fluid Dynamics (CFD) nonlinear code in predicting the pressure signature and ultimately the sonic boom generated by a high speed civilian transport. NASA had designed, built, and wind tunnel tested two low boom configurations for flight at Mach 2 and Mach 3. Experimental data was taken at several distances from these models up to a body length from the axis of the aircraft. The near field experimental data serves as a test bed for computational fluid dynamic codes in evaluating their accuracy and reliability for predicting the behavior of future HSCT designs. Sonic boom prediction methodology exists which is based on modified linear theory. These methods can be used reliably if near field signatures are available at distances from the aircraft where nonlinear and three dimensional effects have diminished in importance. Up to the present time, the only reliable method to obtain this data was via the wind tunnel with costly model construction and testing. It is the intent of the present paper to apply a modified three dimensional Euler code to predict the near field signatures of the two low boom configurations recently tested by NASA.

  15. AGR-1 Safety Test Predictions using the PARFUME code

    SciTech Connect

    Blaise Collin

    2012-05-01

    The PARFUME modeling code was used to predict failure probability of TRISO-coated fuel particles and diffusion of fission products through these particles during safety tests following the first irradiation test of the Advanced Gas Reactor program (AGR-1). These calculations support the AGR-1 Safety Testing Experiment, which is part of the PIE effort on AGR-1. Modeling of the AGR-1 Safety Test Predictions includes a 620-day irradiation followed by a 300-hour heat-up phase of selected AGR-1 compacts. Results include fuel failure probability, palladium penetration, and fractional release of fission products. Results show that no particle failure is predicted during irradiation or heat-up, and that fractional release of fission products is limited during irradiation but that it significantly increases during heat-up.

  16. A predictive coding account of MMN reduction in schizophrenia.

    PubMed

    Wacongne, Catherine

    2016-04-01

    The mismatch negativity (MMN) is thought to be an index of the automatic activation of a specialized network for active prediction and deviance detection in the auditory cortex. It is consistently reduced in schizophrenic patients and has received a lot of interest as a clinical and translational tool. The main neuronal hypothesis regarding the mechanisms leading to a reduced MMN in schizophrenic patients is a dysfunction of NMDA receptors (NMDA-R). However, this hypothesis has never been implemented in a neuronal model. In this paper, we examine the consequences of NMDA-R dysfunction in a neuronal model of MMN based on predictive coding principle. I also investigate how predictive processes may interact with synaptic adaptation in MMN generations and examine the consequences of this interaction for the use of MMN paradigms in schizophrenia research.

  17. Development of a massively parallel parachute performance prediction code

    SciTech Connect

    Peterson, C.W.; Strickland, J.H.; Wolfe, W.P.; Sundberg, W.D.; McBride, D.D.

    1997-04-01

    The Department of Energy has given Sandia full responsibility for the complete life cycle (cradle to grave) of all nuclear weapon parachutes. Sandia National Laboratories is initiating development of a complete numerical simulation of parachute performance, beginning with parachute deployment and continuing through inflation and steady state descent. The purpose of the parachute performance code is to predict the performance of stockpile weapon parachutes as these parachutes continue to age well beyond their intended service life. A new massively parallel computer will provide unprecedented speed and memory for solving this complex problem, and new software will be written to treat the coupled fluid, structure and trajectory calculations as part of a single code. Verification and validation experiments have been proposed to provide the necessary confidence in the computations.

  18. Interpersonal predictive coding, not action perception, is impaired in autism

    PubMed Central

    von der Lühe, T.; Manera, V.; Barisic, I.; Becchio, C.; Vogeley, K.

    2016-01-01

    This study was conducted to examine interpersonal predictive coding in individuals with high-functioning autism (HFA). Healthy and HFA participants observed point-light displays of two agents (A and B) performing separate actions. In the ‘communicative’ condition, the action performed by agent B responded to a communicative gesture performed by agent A. In the ‘individual’ condition, agent A's communicative action was substituted by a non-communicative action. Using a simultaneous masking-detection task, we demonstrate that observing agent A's communicative gesture enhanced visual discrimination of agent B for healthy controls, but not for participants with HFA. These results were not explained by differences in attentional factors as measured via eye-tracking, or by differences in the recognition of the point-light actions employed. Our findings, therefore, suggest that individuals with HFA are impaired in the use of social information to predict others' actions and provide behavioural evidence that such deficits could be closely related to impairments of predictive coding. PMID:27069050

  19. Predictions for the Reverberating Spectral Line from a Newly Formed Black Hole Accretion Disk: Case of Tidal Disruption Flares

    NASA Astrophysics Data System (ADS)

    Zhang, Wenda; Yu, Wenfei; Karas, Vladimír; Dovčiak, Michal

    2015-07-01

    Tidal disruption events (TDEs) can be perfect probes of dormant supermassive black holes in normal galaxies. During the rising phase, the accretion luminosity can increase by orders of magnitude in several weeks, and the emergent ionizing radiation illuminates the fresh accretion flow. In this paper, we simulated the evolution of the expected spectral line profile of iron due to such a flare by using a ray-tracing code with effects of general relativity taken into account. We found that the time-dependent profile changes significantly with black hole spin, inclination angle with respect to the black hole equatorial plane, and the expansion velocity of the ionization front. At low values of spin, a “loop” feature appears in the line profile versus time plot when the inclination is no less than 30° and the expansion velocity {v}{exp} is no less than half the speed of light, owing to a shadow in the emission of the truncated disk. In the light curve two peaks occur depending on the inclination angle. At large {v}{exp}, a shallow “nose” feature may develop ahead of the loop; its duration depends on the expansion velocity and the inclination angle. We explore the entire interval of black hole spin parameter ranging from extreme prograde to extreme retrograde rotation, -1\\lt a\\lt 1. In the prograde case, a low-energy tail appears to be more pronounced in the evolving centroid energy of the line. Our results demonstrate the importance of searching for X-ray spectral lines in the early phase of TDE flares in order to constrain black hole mass and spin, as well as properties of the innermost accretion flow.

  20. DCT/DST-based transform coding for intra prediction in image/video coding.

    PubMed

    Saxena, Ankur; Fernandes, Felix C

    2013-10-01

    In this paper, we present a DCT/DST based transform scheme that applies either the conventional DCT or type-7 DST for all the video-coding intra-prediction modes: vertical, horizontal, and oblique. Our approach is applicable to any block-based intra prediction scheme in a codec that employs transforms along the horizontal and vertical direction separably. Previously, Han, Saxena, and Rose showed that for the intra-predicted residuals of horizontal and vertical modes, the DST is the optimal transform with performance close to the KLT. Here, we prove that this is indeed the case for the other oblique modes. The optimal choice of using DCT or DST is based on intra-prediction modes and requires no additional signaling information or rate-distortion search. The DCT/DST scheme presented in this paper was adopted in the HEVC standardization in March 2011. Further simplifications, especially to reduce implementation complexity, which remove the mode-dependency between DCT and DST, and simply always use DST for the 4 × 4 intra luma blocks, were adopted in the HEVC standard in July 2012. Simulation results conducted for the DCT/DST algorithm are shown in the reference software for the ongoing HEVC standardization. Our results show that the DCT/DST scheme provides significant BD-rate improvement over the conventional DCT based scheme for intra prediction in video sequences.

  1. Arc Jet Facility Test Condition Predictions Using the ADSI Code

    NASA Technical Reports Server (NTRS)

    Palmer, Grant; Prabhu, Dinesh; Terrazas-Salinas, Imelda

    2015-01-01

    The Aerothermal Design Space Interpolation (ADSI) tool is used to interpolate databases of previously computed computational fluid dynamic solutions for test articles in a NASA Ames arc jet facility. The arc jet databases are generated using an Navier-Stokes flow solver using previously determined best practices. The arc jet mass flow rates and arc currents used to discretize the database are chosen to span the operating conditions possible in the arc jet, and are based on previous arc jet experimental conditions where possible. The ADSI code is a database interpolation, manipulation, and examination tool that can be used to estimate the stagnation point pressure and heating rate for user-specified values of arc jet mass flow rate and arc current. The interpolation is performed in the other direction (predicting mass flow and current to achieve a desired stagnation point pressure and heating rate). ADSI is also used to generate 2-D response surfaces of stagnation point pressure and heating rate as a function of mass flow rate and arc current (or vice versa). Arc jet test data is used to assess the predictive capability of the ADSI code.

  2. Probability Distribution Estimation for Autoregressive Pixel-Predictive Image Coding.

    PubMed

    Weinlich, Andreas; Amon, Peter; Hutter, Andreas; Kaup, André

    2016-03-01

    Pixelwise linear prediction using backward-adaptive least-squares or weighted least-squares estimation of prediction coefficients is currently among the state-of-the-art methods for lossless image compression. While current research is focused on mean intensity prediction of the pixel to be transmitted, best compression requires occurrence probability estimates for all possible intensity values. Apart from common heuristic approaches, we show how prediction error variance estimates can be derived from the (weighted) least-squares training region and how a complete probability distribution can be built based on an autoregressive image model. The analysis of image stationarity properties further allows deriving a novel formula for weight computation in weighted least-squares proofing and generalizing ad hoc equations from the literature. For sparse intensity distributions in non-natural images, a modified image model is presented. Evaluations were done in the newly developed C++ framework volumetric, artificial, and natural image lossless coder (Vanilc), which can compress a wide range of images, including 16-bit medical 3D volumes or multichannel data. A comparison with several of the best available lossless image codecs proofs that the method can achieve very competitive compression ratios. In terms of reproducible research, the source code of Vanilc has been made public.

  3. Fast motion prediction algorithm for multiview video coding

    NASA Astrophysics Data System (ADS)

    Abdelazim, Abdelrahman; Zhang, Guang Y.; Mein, Stephen J.; Varley, Martin R.; Ait-Boudaoud, Djamel

    2011-06-01

    Multiview Video Coding (MVC) is an extension to the H.264/MPEG-4 AVC video compression standard developed with joint efforts by MPEG/VCEG to enable efficient encoding of sequences captured simultaneously from multiple cameras using a single video stream. Therefore the design is aimed at exploiting inter-view dependencies in addition to reducing temporal redundancies. However, this further increases the overall encoding complexity In this paper, the high correlation between a macroblock and its enclosed partitions is utilised to estimate motion homogeneity, and based on the result inter-view prediction is selectively enabled or disabled. Moreover, if the MVC is divided into three layers in terms of motion prediction; the first being the full and sub-pixel motion search, the second being the mode selection process and the third being repetition of the first and second for inter-view prediction, the proposed algorithm significantly reduces the complexity in the three layers. To assess the proposed algorithm, a comprehensive set of experiments were conducted. The results show that the proposed algorithm significantly reduces the motion estimation time whilst maintaining similar Rate Distortion performance, when compared to both the H.264/MVC reference software and recently reported work.

  4. A CMOS Imager with Focal Plane Compression using Predictive Coding

    NASA Technical Reports Server (NTRS)

    Leon-Salas, Walter D.; Balkir, Sina; Sayood, Khalid; Schemm, Nathan; Hoffman, Michael W.

    2007-01-01

    This paper presents a CMOS image sensor with focal-plane compression. The design has a column-level architecture and it is based on predictive coding techniques for image decorrelation. The prediction operations are performed in the analog domain to avoid quantization noise and to decrease the area complexity of the circuit, The prediction residuals are quantized and encoded by a joint quantizer/coder circuit. To save area resources, the joint quantizerlcoder circuit exploits common circuitry between a single-slope analog-to-digital converter (ADC) and a Golomb-Rice entropy coder. This combination of ADC and encoder allows the integration of the entropy coder at the column level. A prototype chip was fabricated in a 0.35 pm CMOS process. The output of the chip is a compressed bit stream. The test chip occupies a silicon area of 2.60 mm x 5.96 mm which includes an 80 X 44 APS array. Tests of the fabricated chip demonstrate the validity of the design.

  5. Numerical Prediction of SERN Performance using WIND code

    NASA Technical Reports Server (NTRS)

    Engblom, W. A.

    2003-01-01

    Computational results are presented for the performance and flow behavior of single-expansion ramp nozzles (SERNs) during overexpanded operation and transonic flight. Three-dimensional Reynolds-Averaged Navier Stokes (RANS) results are obtained for two vehicle configurations, including the NASP Model 5B and ISTAR RBCC (a variant of X-43B) using the WIND code. Numerical predictions for nozzle integrated forces and pitch moments are directly compared to experimental data for the NASP Model 5B, and adequate-to-excellent agreement is found. The sensitivity of SERN performance and separation phenomena to freestream static pressure and Mach number is demonstrated via a matrix of cases for both vehicles. 3-D separation regions are shown to be induced by either lateral (e.g., sidewall) shocks or vertical (e.g., cowl trailing edge) shocks. Finally, the implications of this work to future preliminary design efforts involving SERNs are discussed.

  6. AGR-2 safety test predictions using the PARFUME code

    SciTech Connect

    Collin, Blaise P.

    2014-09-01

    This report documents calculations performed to predict failure probability of TRISO-coated fuel particles and diffusion of fission products through these particles during safety tests following the second irradiation test of the Advanced Gas Reactor program (AGR-2). The calculations include the modeling of the AGR-2 irradiation that occurred from June 2010 to October 2013 in the Advanced Test Reactor (ATR) and the modeling of a safety testing phase to support safety tests planned at Oak Ridge National Laboratory and at Idaho National Laboratory (INL) for a selection of AGR-2 compacts. The heat-up of AGR-2 compacts is a critical component of the AGR-2 fuel performance evaluation, and its objectives are to identify the effect of accident test temperature, burnup, and irradiation temperature on the performance of the fuel at elevated temperature. Safety testing of compacts will be followed by detailed examinations of the fuel particles to further evaluate fission product retention and behavior of the kernel and coatings. The modeling was performed using the particle fuel model computer code PARFUME developed at INL. PARFUME is an advanced gas-cooled reactor fuel performance modeling and analysis code (Miller 2009). It has been developed as an integrated mechanistic code that evaluates the thermal, mechanical, and physico-chemical behavior of fuel particles during irradiation to determine the failure probability of a population of fuel particles given the particle-to-particle statistical variations in physical dimensions and material properties that arise from the fuel fabrication process, accounting for all viable mechanisms that can lead to particle failure. The code also determines the diffusion of fission products from the fuel through the particle coating layers, and through the fuel matrix to the coolant boundary. The subsequent release of fission products is calculated at the compact level (release of fission products from the compact). PARFUME calculates the

  7. Predictive Coding: A Fresh View of Inhibition in the Retina

    NASA Astrophysics Data System (ADS)

    Srinivasan, M. V.; Laughlin, S. B.; Dubs, A.

    1982-11-01

    Interneurons exhibiting centre--surround antagonism within their receptive fields are commonly found in peripheral visual pathways. We propose that this organization enables the visual system to encode spatial detail in a manner that minimizes the deleterious effects of intrinsic noise, by exploiting the spatial correlation that exists within natural scenes. The antagonistic surround takes a weighted mean of the signals in neighbouring receptors to generate a statistical prediction of the signal at the centre. The predicted value is subtracted from the actual centre signal, thus minimizing the range of outputs transmitted by the centre. In this way the entire dynamic range of the interneuron can be devoted to encoding a small range of intensities, thus rendering fine detail detectable against intrinsic noise injected at later stages in processing. This predictive encoding scheme also reduces spatial redundancy, thereby enabling the array of interneurons to transmit a larger number of distinguishable images, taking into account the expected structure of the visual world. The profile of the required inhibitory field is derived from statistical estimation theory. This profile depends strongly upon the signal: noise ratio and weakly upon the extent of lateral spatial correlation. The receptive fields that are quantitatively predicted by the theory resemble those of X-type retinal ganglion cells and show that the inhibitory surround should become weaker and more diffuse at low intensities. The latter property is unequivocally demonstrated in the first-order interneurons of the fly's compound eye. The theory is extended to the time domain to account for the phasic responses of fly interneurons. These comparisons suggest that, in the early stages of processing, the visual system is concerned primarily with coding the visual image to protect against subsequent intrinsic noise, rather than with reconstructing the scene or extracting specific features from it. The treatment

  8. Optimal coding of vectorcardiographic sequences using spatial prediction.

    PubMed

    Augustyniak, Piotr

    2007-05-01

    This paper discusses principles, implementation details, and advantages of sequence coding algorithm applied to the compression of vectocardiograms (VCG). The main novelty of the proposed method is the automatic management of distortion distribution controlled by the local signal contents in both technical and medical aspects. As in clinical practice, the VCG loops representing P, QRS, and T waves in the three-dimensional (3-D) space are considered here as three simultaneous sequences of objects. Because of the similarity of neighboring loops, encoding the values of prediction error significantly reduces the data set volume. The residual values are de-correlated with the discrete cosine transform (DCT) and truncated at certain energy threshold. The presented method is based on the irregular temporal distribution of medical data in the signal and takes advantage of variable sampling frequency for automatically detected VCG loops. The features of the proposed algorithm are confirmed by the results of the numerical experiment carried out for a wide range of real records. The average data reduction ratio reaches a value of 8.15 while the percent root-mean-square difference (PRD) distortion ratio for the most important sections of signal does not exceed 1.1%.

  9. Predicted functional RNAs within coding regions constrain evolutionary rates of yeast proteins.

    PubMed

    Warden, Charles D; Kim, Seong-Ho; Yi, Soojin V

    2008-02-13

    Functional RNAs (fRNAs) are being recognized as an important regulatory component in biological processes. Interestingly, recent computational studies suggest that the number and biological significance of functional RNAs within coding regions (coding fRNAs) may have been underestimated. We hypothesized that such coding fRNAs will impose additional constraint on sequence evolution because the DNA primary sequence has to simultaneously code for functional RNA secondary structures on the messenger RNA in addition to the amino acid codons for the protein sequence. To test this prediction, we first utilized computational methods to predict conserved fRNA secondary structures within multiple species alignments of Saccharomyces sensu strico genomes. We predict that as much as 5% of the genes in the yeast genome contain at least one functional RNA secondary structure within their protein-coding region. We then analyzed the impact of coding fRNAs on the evolutionary rate of protein-coding genes because a decrease in evolutionary rate implies constraint due to biological functionality. We found that our predicted coding fRNAs have a significant influence on evolutionary rates (especially at synonymous sites), independent of other functional measures. Thus, coding fRNA may play a role on sequence evolution. Given that coding regions of humans and flies contain many more predicted coding fRNAs than yeast, the impact of coding fRNAs on sequence evolution may be substantial in genomes of higher eukaryotes.

  10. An experimental investigation of multi-element airfoil ice accretion and resulting performance degradation

    NASA Technical Reports Server (NTRS)

    Potapczuk, Mark G.; Berkowitz, Brian M.

    1989-01-01

    An investigation of the ice accretion pattern and performance characteristics of a multi-element airfoil was undertaken in the NASA Lewis 6- by 9-Foot Icing Research Tunnel. Several configurations of main airfoil, slat, and flaps were employed to examine the effects of ice accretion and provide further experimental information for code validation purposes. The text matrix consisted of glaze, rime, and mixed icing conditions. Airflow and icing cloud conditions were set to correspond to those typical of the operating environment anticipated tor a commercial transport vehicle. Results obtained included ice profile tracings, photographs of the ice accretions, and force balance measurements obtained both during the accretion process and in a post-accretion evaluation over a range of angles of attack. The tracings and photographs indicated significant accretions on the slat leading edge, in gaps between slat or flaps and the main wing, on the flap leading-edge surfaces, and on flap lower surfaces. Force measurments indicate the possibility of severe performance degradation, especially near C sub Lmax, for both light and heavy ice accretion and performance analysis codes presently in use. The LEWICE code was used to evaluate the ice accretion shape developed during one of the rime ice tests. The actual ice shape was then evaluated, using a Navier-Strokes code, for changes in performance characteristics. These predicted results were compared to the measured results and indicate very good agreement.

  11. Analytic solution to verify code predictions of two-phase flow in a boiling water reactor core channel. [CONDOR code

    SciTech Connect

    Chen, K.F.; Olson, C.A.

    1983-09-01

    One reliable method that can be used to verify the solution scheme of a computer code is to compare the code prediction to a simplified problem for which an analytic solution can be derived. An analytic solution for the axial pressure drop as a function of the flow was obtained for the simplified problem of homogeneous equilibrium two-phase flow in a vertical, heated channel with a cosine axial heat flux shape. This analytic solution was then used to verify the predictions of the CONDOR computer code, which is used to evaluate the thermal-hydraulic performance of boiling water reactors. The results show excellent agreement between the analytic solution and CONDOR prediction.

  12. Dynamic Forces in Spur Gears - Measurement, Prediction, and Code Validation

    NASA Technical Reports Server (NTRS)

    Oswald, Fred B.; Townsend, Dennis P.; Rebbechi, Brian; Lin, Hsiang Hsi

    1996-01-01

    Measured and computed values for dynamic loads in spur gears were compared to validate a new version of the NASA gear dynamics code DANST-PC. Strain gage data from six gear sets with different tooth profiles were processed to determine the dynamic forces acting between the gear teeth. Results demonstrate that the analysis code successfully simulates the dynamic behavior of the gears. Differences between analysis and experiment were less than 10 percent under most conditions.

  13. Magnetized accretion

    NASA Astrophysics Data System (ADS)

    Heyvaerts, J.

    This lecture reviews in simple terms the general subject of large scale magnetic field coupling to plasma flows in the vicinity of accreting compact stars. The relevant astrophysical phenomenology is summarized. Disk interaction with the magnetosphere of accreting stars is first discussed, in particular the structure of the magnetopause, its stability and plasma ejection in so-called propeller systems. The physics of accretion/ejection is then considered. Acceleration and focusing mechanisms of jets from accretion disks around compact stars or black holes and the question of the self-consistency of accretion and ejection are described. By contrast, small scale MHD turbulence in disks is not discussed, neither are accretion columns near the polar caps of neutron stars or white dwarfs. The reader is only assumed to have some basic knowledge of astrophysics and of fluid mechanics and electromagnetism.

  14. Development of a shock noise prediction code for high-speed helicopters - The subsonically moving shock

    NASA Technical Reports Server (NTRS)

    Tadghighi, H.; Holz, R.; Farassat, F.; Lee, Yung-Jang

    1991-01-01

    A previously defined airfoil subsonic shock-noise prediction formula whose result depends on a mapping of the time-dependent shock surface to a time-independent computational domain is presently coded and incorporated in the NASA-Langley rotor-noise prediction code, WOPWOP. The structure and algorithms used in the shock-noise prediction code are presented; special care has been taken to reduce computation time while maintaining accuracy. Numerical examples of shock-noise prediction are presented for hover and forward flight. It is confirmed that shock noise is an important component of the quadrupole source.

  15. Divide sampling-based hybrid temporal-spatial prediction coding for H.264/AVC

    NASA Astrophysics Data System (ADS)

    Li, Hongwei; Song, Rui; Wu, Chengke; Zhang, Jie

    2011-11-01

    A divide sampling-based hybrid temporal-spatial prediction coding algorithm is designed to further improve the coding performance of the conventional H.264/AVC coding. In the proposed algorithm, a frame is first divided into four equal-sized subframes, and the first subframe is coded using the rate distortion optimization model with inter- or intraprediction adaptively. Then, the optimal prediction method of the macroblock in other subframes is selected flexibly and reasonably from intraprediction, the fast interprediction, and the spatial interpolation prediction. The simulation results show that compared with the conventional H.264/AVC coding, the average bit rate is reduced by 6.15% under the same peak signal-to-noise ratio (PSNR), the average PSNR is increased by 0.22 dB under the same bit rate, and the average coding time is saved by 12.40% in the proposed algorithm.

  16. GERMINAL — A computer code for predicting fuel pin behaviour

    NASA Astrophysics Data System (ADS)

    Melis, J. C.; Roche, L.; Piron, J. P.; Truffert, J.

    1992-06-01

    In the frame of the R and D on FBR fuels, CEA/DEC is developing the computer code GERMINAL to study the fuel pin thermal-mechanical behaviour during steady-state and incidental conditions. The development of GERMINAL is foreseen in two steps: (1) The GERMINAL 1 code designed as a "working horse" for immediate applications. The version 1 of GERMINAL 1 is presently delivered fully documented with a physical qualification guaranteed up to 8 at%. (2) The version 2 of GERMINAL 1, in addition to what is presently treated in GERMINAL 1 includes the treatment of high burnup effects on the fission gas release and the fuel-clad joint. This version, GERMINAL 1.2, is presently under testing and will be completed up to the end of 1991. The GERMINAL 2 code designed as a reference code for future applications will cover all the aspects of GERMINAL 1 (including high burnup effects) with a more general mechanical treatment, and a completely revised and advanced informatical structure.

  17. Assessment of 3D Codes for Predicting Liner Attenuation in Flow Ducts

    NASA Technical Reports Server (NTRS)

    Watson, W. R.; Nark, D. M.; Jones, M. G.

    2008-01-01

    This paper presents comparisons of seven propagation codes for predicting liner attenuation in ducts with flow. The selected codes span the spectrum of methods available (finite element, parabolic approximation, and pseudo-time domain) and are collectively representative of the state-of-art in the liner industry. These codes are included because they have two-dimensional and three-dimensional versions and can be exported to NASA's Columbia Supercomputer. The basic assumptions, governing differential equations, boundary conditions, and numerical methods underlying each code are briefly reviewed and an assessment is performed based on two predefined metrics. The two metrics used in the assessment are the accuracy of the predicted attenuation and the amount of wall clock time to predict the attenuation. The assessment is performed over a range of frequencies, mean flow rates, and grazing flow liner impedances commonly used in the liner industry. The primary conclusions of the study are (1) predicted attenuations are in good agreement for rigid wall ducts, (2) the majority of codes compare well to each other and to approximate results from mode theory for soft wall ducts, (3) most codes compare well to measured data on a statistical basis, (4) only the finite element codes with cubic Hermite polynomials capture extremely large attenuations, and (5) wall clock time increases by an order of magnitude or more are observed for a three-dimensional code relative to the corresponding two-dimensional version of the same code.

  18. A predictive transport modeling code for ICRF-heated tokamaks

    SciTech Connect

    Phillips, C.K.; Hwang, D.Q. . Plasma Physics Lab.); Houlberg, W.; Attenberger, S.; Tolliver, J.; Hively, L. )

    1992-02-01

    In this report, a detailed description of the physic included in the WHIST/RAZE package as well as a few illustrative examples of the capabilities of the package will be presented. An in depth analysis of ICRF heating experiments using WHIST/RAZE will be discussed in a forthcoming report. A general overview of philosophy behind the structure of the WHIST/RAZE package, a summary of the features of the WHIST code, and a description of the interface to the RAZE subroutines are presented in section 2 of this report. Details of the physics contained in the RAZE code are examined in section 3. Sample results from the package follow in section 4, with concluding remarks and a discussion of possible improvements to the package discussed in section 5.

  19. Curved Duct Noise Prediction Using the Fast Scattering Code

    NASA Technical Reports Server (NTRS)

    Dunn, M. H.; Tinetti, Ana F.; Farassat, F.

    2007-01-01

    Results of a study to validate the Fast Scattering Code (FSC) as a duct noise predictor, including the effects of curvature, finite impedance on the walls, and uniform background flow, are presented in this paper. Infinite duct theory was used to generate the modal content of the sound propagating within the duct. Liner effects were incorporated via a sound absorbing boundary condition on the scattering surfaces. Simulations for a rectangular duct of constant cross-sectional area have been compared to analytical solutions and experimental data. Comparisons with analytical results indicate that the code can properly calculate a given dominant mode for hardwall surfaces. Simulated acoustic behavior in the presence of lined walls (using hardwall duct modes as incident sound) is consistent with expected trends. Duct curvature was found to enhance weaker modes and reduce pressure amplitude. Agreement between simulated and experimental results for a straight duct with hard walls (no flow) was excellent.

  20. Operation of the helicopter antenna radiation prediction code

    NASA Technical Reports Server (NTRS)

    Braeden, E. W.; Klevenow, F. T.; Newman, E. H.; Rojas, R. G.; Sampath, K. S.; Scheik, J. T.; Shamansky, H. T.

    1993-01-01

    HARP is a front end as well as a back end for the AMC and NEWAIR computer codes. These codes use the Method of Moments (MM) and the Uniform Geometrical Theory of Diffraction (UTD), respectively, to calculate the electromagnetic radiation patterns for antennas on aircraft. The major difficulty in using these codes is in the creation of proper input files for particular aircraft and in verifying that these files are, in fact, what is intended. HARP creates these input files in a consistent manner and allows the user to verify them for correctness using sophisticated 2 and 3D graphics. After antenna field patterns are calculated using either MM or UTD, HARP can display the results on the user's screen or provide hardcopy output. Because the process of collecting data, building the 3D models, and obtaining the calculated field patterns was completely automated by HARP, the researcher's productivity can be many times what it could be if these operations had to be done by hand. A complete, step by step, guide is provided so that the researcher can quickly learn to make use of all the capabilities of HARP.

  1. Impact of hierarchies of clinical codes on predicting future days in hospital.

    PubMed

    Yang Xie; Neubauer, Sandra; Schreier, Gunter; Redmond, Stephen J; Lovell, Nigel H

    2015-01-01

    Health insurance claims contain valuable information for predicting the future health of a population. Nowadays, with many mature machine learning algorithms, models can be implemented to predict future medical costs and hospitalizations. However, it is well-known that the way in which the data are represented significantly affects the performance of machine learning algorithms. In health insurance claims, key clinical information mainly comes from the associated clinical codes, such as diagnosis codes and procedure codes, which are hierarchically structured. In this study, it is investigated whether the hierarchies of such clinical codes can be utilized to improve predictive performance in the context of predicting future days in hospital. Empirical investigations were done on data sets of different sizes, considering that the frequency of the appearance of lower-level (more specific) clinical codes could vary significantly in populations of different sizes. The use of bagged trees with feature sets that include only basic demographic features, low-level, medium-level, high-level clinical codes, and a full feature set were compared. The main finding from this study is that different hierarchies of clinical codes do not have a significant impact on the predictive power. Some other findings include: 1) Sample size greatly affects the predictive outcome (more observations result in more stable and more accurate outcomes); 2) Combined use of enriched demographic features and clinical features give better performance as compared to using them separately.

  2. Bondi-Hoyle Accretion in an Isothermal Magnetized Plasma

    NASA Astrophysics Data System (ADS)

    Lee, Aaron T.; Cunningham, Andrew J.; McKee, Christopher F.; Klein, Richard I.

    2014-03-01

    In regions of star formation, protostars and newborn stars will accrete mass from their natal clouds. These clouds are threaded by magnetic fields with a strength characterized by the plasma β—the ratio of thermal and magnetic pressures. Observations show that molecular clouds have β <~ 1, so magnetic fields have the potential to play a significant role in the accretion process. We have carried out a numerical study of the effect of large-scale magnetic fields on the rate of accretion onto a uniformly moving point particle from a uniform, non-self-gravitating, isothermal gas. We consider gas moving with sonic Mach numbers of up to {\\cal M}\\approx 45; magnetic fields that are either parallel, perpendicular, or oriented 45° to the flow; and β as low as 0.01. Our simulations utilize adaptive mesh refinement in order to obtain high spatial resolution where it is needed; this also allows the boundaries to be far from the accreting object to avoid unphysical effects arising from boundary conditions. Additionally, we show that our results are independent of our exact prescription for accreting mass in the sink particle. We give simple expressions for the steady-state accretion rate as a function of β and {\\cal M} for the parallel and perpendicular orientations. Using typical molecular cloud values of {\\cal M}\\sim 5 and β ~ 0.04 from the literature, our fits suggest that a 0.4 M ⊙ star accretes ~4 × 10-9 M ⊙ yr-1, almost a factor of two less than accretion rates predicted by hydrodynamic models. This disparity can grow to orders of magnitude for stronger fields and lower Mach numbers. We also discuss the applicability of these accretion rates versus accretion rates expected from gravitational collapse, and under what conditions a steady state is possible. The reduction in the accretion rate in a magnetized medium leads to an increase in the time required to form stars in competitive accretion models, making such models less efficient than predicted by

  3. Bondi-Hoyle accretion in an isothermal magnetized plasma

    SciTech Connect

    Lee, Aaron T.; McKee, Christopher F.; Klein, Richard I.; Cunningham, Andrew J.

    2014-03-01

    In regions of star formation, protostars and newborn stars will accrete mass from their natal clouds. These clouds are threaded by magnetic fields with a strength characterized by the plasma β—the ratio of thermal and magnetic pressures. Observations show that molecular clouds have β ≲ 1, so magnetic fields have the potential to play a significant role in the accretion process. We have carried out a numerical study of the effect of large-scale magnetic fields on the rate of accretion onto a uniformly moving point particle from a uniform, non-self-gravitating, isothermal gas. We consider gas moving with sonic Mach numbers of up to M≈45; magnetic fields that are either parallel, perpendicular, or oriented 45° to the flow; and β as low as 0.01. Our simulations utilize adaptive mesh refinement in order to obtain high spatial resolution where it is needed; this also allows the boundaries to be far from the accreting object to avoid unphysical effects arising from boundary conditions. Additionally, we show that our results are independent of our exact prescription for accreting mass in the sink particle. We give simple expressions for the steady-state accretion rate as a function of β and M for the parallel and perpendicular orientations. Using typical molecular cloud values of M∼5 and β ∼ 0.04 from the literature, our fits suggest that a 0.4 M {sub ☉} star accretes ∼4 × 10{sup –9} M {sub ☉} yr{sup –1}, almost a factor of two less than accretion rates predicted by hydrodynamic models. This disparity can grow to orders of magnitude for stronger fields and lower Mach numbers. We also discuss the applicability of these accretion rates versus accretion rates expected from gravitational collapse, and under what conditions a steady state is possible. The reduction in the accretion rate in a magnetized medium leads to an increase in the time required to form stars in competitive accretion models, making such models less efficient than predicted by

  4. ICAN: A versatile code for predicting composite properties

    NASA Technical Reports Server (NTRS)

    Ginty, C. A.; Chamis, C. C.

    1986-01-01

    The Integrated Composites ANalyzer (ICAN), a stand-alone computer code, incorporates micromechanics equations and laminate theory to analyze/design multilayered fiber composite structures. Procedures for both the implementation of new data in ICAN and the selection of appropriate measured data are summarized for: (1) composite systems subject to severe thermal environments; (2) woven fabric/cloth composites; and (3) the selection of new composite systems including those made from high strain-to-fracture fibers. The comparisons demonstrate the versatility of ICAN as a reliable method for determining composite properties suitable for preliminary design.

  5. Predictive codes of familiarity and context during the perceptual learning of facial identities.

    PubMed

    Apps, Matthew A J; Tsakiris, Manos

    2013-01-01

    Face recognition is a key component of successful social behaviour. However, the computational processes that underpin perceptual learning and recognition as faces transition from unfamiliar to familiar are poorly understood. In predictive coding, learning occurs through prediction errors that update stimulus familiarity, but recognition is a function of both stimulus and contextual familiarity. Here we show that behavioural responses on a two-option face recognition task can be predicted by the level of contextual and facial familiarity in a computational model derived from predictive-coding principles. Using fMRI, we show that activity in the superior temporal sulcus varies with the contextual familiarity in the model, whereas activity in the fusiform face area covaries with the prediction error parameter that updated facial familiarity. Our results characterize the key computations underpinning the perceptual learning of faces, highlighting that the functional properties of face-processing areas conform to the principles of predictive coding.

  6. Monte Carlo Predictions of Prompt Fission Neutrons and Photons: a Code Comparison

    NASA Astrophysics Data System (ADS)

    Talou, P.; Kawano, T.; Stetcu, I.; Vogt, R.; Randrup, J.

    2014-04-01

    This paper reports on initial comparisons between the LANL CGMF and LBNL/LLNL FREYA codes, which both aim at computing prompt fission neutrons and gammas. While the methodologies used in both codes are somewhat similar, the detailed implementations and physical assumptions are different. We are investigating how some of these differences impact predictions.

  7. Evolutionary modeling and prediction of non-coding RNAs in Drosophila.

    PubMed

    Bradley, Robert K; Uzilov, Andrew V; Skinner, Mitchell E; Bendaña, Yuri R; Barquist, Lars; Holmes, Ian

    2009-08-11

    We performed benchmarks of phylogenetic grammar-based ncRNA gene prediction, experimenting with eight different models of structural evolution and two different programs for genome alignment. We evaluated our models using alignments of twelve Drosophila genomes. We find that ncRNA prediction performance can vary greatly between different gene predictors and subfamilies of ncRNA gene. Our estimates for false positive rates are based on simulations which preserve local islands of conservation; using these simulations, we predict a higher rate of false positives than previous computational ncRNA screens have reported. Using one of the tested prediction grammars, we provide an updated set of ncRNA predictions for D. melanogaster and compare them to previously-published predictions and experimental data. Many of our predictions show correlations with protein-coding genes. We found significant depletion of intergenic predictions near the 3' end of coding regions and furthermore depletion of predictions in the first intron of protein-coding genes. Some of our predictions are colocated with larger putative unannotated genes: for example, 17 of our predictions showing homology to the RFAM family snoR28 appear in a tandem array on the X chromosome; the 4.5 Kbp spanned by the predicted tandem array is contained within a FlyBase-annotated cDNA.

  8. PARC Navier-Stokes code upgrade and validation for high speed aeroheating predictions

    NASA Technical Reports Server (NTRS)

    Liver, Peter A.; Praharaj, Sarat C.; Seaford, C. Mark

    1990-01-01

    Applications of the PARC full Navier-Stokes code for hypersonic flowfield and aeroheating predictions around blunt bodies such as the Aeroassist Flight Experiment (AFE) and Aeroassisted Orbital Transfer Vehicle (AOTV) are evaluated. Two-dimensional/axisymmetric and three-dimensional perfect gas versions of the code were upgraded and tested against benchmark wind tunnel cases of hemisphere-cylinder, three-dimensional AFE forebody, and axisymmetric AFE and AOTV aerobrake/wake flowfields. PARC calculations are in good agreement with experimental data and results of similar computer codes. Difficulties encountered in flowfield and heat transfer predictions due to effects of grid density, boundary conditions such as singular stagnation line axis and artificial dissipation terms are presented together with subsequent improvements made to the code. The experience gained with the perfect gas code is being currently utilized in applications of an equilibrium air real gas PARC version developed at REMTECH.

  9. Ducted-Fan Engine Acoustic Predictions Using a Navier-Stokes Code

    NASA Technical Reports Server (NTRS)

    Rumsey, C. L.; Biedron, R. T.; Farassat, F.; Spence, P. L.

    1998-01-01

    A Navier-Stokes computer code is used to predict one of the ducted-fan engine acoustic modes that results from rotor-wake/stator-blade interaction. A patched sliding-zone interface is employed to pass information between the moving rotor row and the stationary stator row. The code produces averaged aerodynamic results downstream of the rotor that agree well with a widely used average-passage code. The acoustic mode of interest is generated successfully by the code and is propagated well upstream of the rotor, temporal and spatial numerical resolution are fine enough such that attenuation of the signal is small. Two acoustic codes are used to find the far-field noise. Near-field propagation is computed by using Eversman's wave envelope code, which is based on a finite-element model. Propagation to the far field is accomplished by using the Kirchhoff formula for moving surfaces with the results of the wave envelope code as input data. Comparison of measured and computed far-field noise levels show fair agreement in the range of directivity angles where the peak radiation lobes from the inlet are observed. Although only a single acoustic mode is targeted in this study, the main conclusion is a proof-of-concept: Navier Stokes codes can be used both to generate and propagate rotor-stator acoustic modes forward through an engine, where the results can be coupled to other far-field noise prediction codes.

  10. Ducted-Fan Engine Acoustic Predictions using a Navier-Stokes Code

    NASA Technical Reports Server (NTRS)

    Rumsey, C. L.; Biedron, R. T.; Farassat, F.; Spence, P. L.

    1998-01-01

    A Navier-Stokes computer code is used to predict one of the ducted-fan engine acoustic modes that results from rotor-wake/stator-blade interaction. A patched sliding-zone interface is employed to pass information between the moving rotor row and the stationary stator row. The code produces averaged aerodynamic results downstream of the rotor that agree well with a widely used average-passage code. The acoustic mode of interest is generated successfully by the code and is propagated well upstream of the rotor; temporal and spatial numerical resolution are fine enough such that attenuation of the signal is small. Two acoustic codes are used to find the far-field noise. Near-field propagation is computed by using Eversman's wave envelope code, which is based on a finite-element model. Propagation to the far field is accomplished by using the Kirchhoff formula for moving surfaces with the results of the wave envelope code as input data. Comparison of measured and computed far-field noise levels show fair agreement in the range of directivity angles where the peak radiation lobes from the inlet are observed. Although only a single acoustic mode is targeted in this study, the main conclusion is a proof-of-concept: Navier-Stokes codes can be used both to generate and propagate rotor/stator acoustic modes forward through an engine, where the results can be coupled to other far-field noise prediction codes.

  11. Tiltrotor Aeroacoustic Code (TRAC) Prediction Assessment and Initial Comparisons with Tram Test Data

    NASA Technical Reports Server (NTRS)

    Burley, Casey L.; Brooks, Thomas F.; Charles, Bruce D.; McCluer, Megan

    1999-01-01

    A prediction sensitivity assessment to inputs and blade modeling is presented for the TiltRotor Aeroacoustic Code (TRAC). For this study, the non-CFD prediction system option in TRAC is used. Here, the comprehensive rotorcraft code, CAMRAD.Mod1, coupled with the high-resolution sectional loads code HIRES, predicts unsteady blade loads to be used in the noise prediction code WOPWOP. The sensitivity of the predicted blade motions, blade airloads, wake geometry, and acoustics is examined with respect to rotor rpm, blade twist and chord, and to blade dynamic modeling. To accomplish this assessment, an interim input-deck for the TRAM test model and an input-deck for a reference test model are utilized in both rigid and elastic modes. Both of these test models are regarded as near scale models of the V-22 proprotor (tiltrotor). With basic TRAC sensitivities established, initial TRAC predictions are compared to results of an extensive test of an isolated model proprotor. The test was that of the TiltRotor Aeroacoustic Model (TRAM) conducted in the Duits-Nederlandse Windtunnel (DNW). Predictions are compared to measured noise for the proprotor operating over an extensive range of conditions. The variation of predictions demonstrates the great care that must be taken in defining the blade motion. However, even with this variability, the predictions using the different blade modeling successfully capture (bracket) the levels and trends of the noise for conditions ranging from descent to ascent.

  12. A new hybrid coding for protein secondary structure prediction based on primary structure similarity.

    PubMed

    Li, Zhong; Wang, Jing; Zhang, Shunpu; Zhang, Qifeng; Wu, Wuming

    2017-03-16

    The coding pattern of protein can greatly affect the prediction accuracy of protein secondary structure. In this paper, a novel hybrid coding method based on the physicochemical properties of amino acids and tendency factors is proposed for the prediction of protein secondary structure. The principal component analysis (PCA) is first applied to the physicochemical properties of amino acids to construct a 3-bit-code, and then the 3 tendency factors of amino acids are calculated to generate another 3-bit-code. Two 3-bit-codes are fused to form a novel hybrid 6-bit-code. Furthermore, we make a geometry-based similarity comparison of the protein primary structure between the reference set and the test set before the secondary structure prediction. We finally use the support vector machine (SVM) to predict those amino acids which are not detected by the primary structure similarity comparison. Experimental results show that our method achieves a satisfactory improvement in accuracy in the prediction of protein secondary structure.

  13. High Speed Research Noise Prediction Code (HSRNOISE) User's and Theoretical Manual

    NASA Technical Reports Server (NTRS)

    Golub, Robert (Technical Monitor); Rawls, John W., Jr.; Yeager, Jessie C.

    2004-01-01

    This report describes a computer program, HSRNOISE, that predicts noise levels for a supersonic aircraft powered by mixed flow turbofan engines with rectangular mixer-ejector nozzles. It fully documents the noise prediction algorithms, provides instructions for executing the HSRNOISE code, and provides predicted noise levels for the High Speed Research (HSR) program Technology Concept (TC) aircraft. The component source noise prediction algorithms were developed jointly by Boeing, General Electric Aircraft Engines (GEAE), NASA and Pratt & Whitney during the course of the NASA HSR program. Modern Technologies Corporation developed an alternative mixer ejector jet noise prediction method under contract to GEAE that has also been incorporated into the HSRNOISE prediction code. Algorithms for determining propagation effects and calculating noise metrics were taken from the NASA Aircraft Noise Prediction Program.

  14. Predictive coding under the free-energy principle.

    PubMed

    Friston, Karl; Kiebel, Stefan

    2009-05-12

    This paper considers prediction and perceptual categorization as an inference problem that is solved by the brain. We assume that the brain models the world as a hierarchy or cascade of dynamical systems that encode causal structure in the sensorium. Perception is equated with the optimization or inversion of these internal models, to explain sensory data. Given a model of how sensory data are generated, we can invoke a generic approach to model inversion, based on a free energy bound on the model's evidence. The ensuing free-energy formulation furnishes equations that prescribe the process of recognition, i.e. the dynamics of neuronal activity that represent the causes of sensory input. Here, we focus on a very general model, whose hierarchical and dynamical structure enables simulated brains to recognize and predict trajectories or sequences of sensory states. We first review hierarchical dynamical models and their inversion. We then show that the brain has the necessary infrastructure to implement this inversion and illustrate this point using synthetic birds that can recognize and categorize birdsongs.

  15. Validation of finite-element codes for prediction of machining distortions in forgings

    NASA Astrophysics Data System (ADS)

    Chandra, U.

    1993-06-01

    When a forging is machined to its net shape, unacceptably large distortions can occur if the final part shape is complex. Such distortions can be predicted with the application of the finite-element method. However, numerical errors associated with the finite element technique can render such predictions unreliable. This paper presents benchmark problems for verifying the accuracy of machining distortions predicted by any prospective finite-element code. Also, a comparison between two industry-standard general-purpose codes, ANSYS and ABAQUS, is presented.

  16. Maneuvering Rotorcraft Noise Prediction: A New Code for a New Problem

    NASA Technical Reports Server (NTRS)

    Brentner, Kenneth S.; Bres, Guillaume A.; Perez, Guillaume; Jones, Henry E.

    2002-01-01

    This paper presents the unique aspects of the development of an entirely new maneuver noise prediction code called PSU-WOPWOP. The main focus of the code is the aeroacoustic aspects of the maneuver noise problem, when the aeromechanical input data are provided (namely aircraft and blade motion, blade airloads). The PSU-WOPWOP noise prediction capability was developed for rotors in steady and transient maneuvering flight. Featuring an object-oriented design, the code allows great flexibility for complex rotor configuration and motion (including multiple rotors and full aircraft motion). The relative locations and number of hinges, flexures, and body motions can be arbitrarily specified to match the any specific rotorcraft. An analysis of algorithm efficiency is performed for maneuver noise prediction along with a description of the tradeoffs made specifically for the maneuvering noise problem. Noise predictions for the main rotor of a rotorcraft in steady descent, transient (arrested) descent, hover and a mild "pop-up" maneuver are demonstrated.

  17. A Predictive Approach to Eliminating Errors in Software Code

    NASA Technical Reports Server (NTRS)

    2006-01-01

    NASA s Metrics Data Program Data Repository is a database that stores problem, product, and metrics data. The primary goal of this data repository is to provide project data to the software community. In doing so, the Metrics Data Program collects artifacts from a large NASA dataset, generates metrics on the artifacts, and then generates reports that are made available to the public at no cost. The data that are made available to general users have been sanitized and authorized for publication through the Metrics Data Program Web site by officials representing the projects from which the data originated. The data repository is operated by NASA s Independent Verification and Validation (IV&V) Facility, which is located in Fairmont, West Virginia, a high-tech hub for emerging innovation in the Mountain State. The IV&V Facility was founded in 1993, under the NASA Office of Safety and Mission Assurance, as a direct result of recommendations made by the National Research Council and the Report of the Presidential Commission on the Space Shuttle Challenger Accident. Today, under the direction of Goddard Space Flight Center, the IV&V Facility continues its mission to provide the highest achievable levels of safety and cost-effectiveness for mission-critical software. By extending its data to public users, the facility has helped improve the safety, reliability, and quality of complex software systems throughout private industry and other government agencies. Integrated Software Metrics, Inc., is one of the organizations that has benefited from studying the metrics data. As a result, the company has evolved into a leading developer of innovative software-error prediction tools that help organizations deliver better software, on time and on budget.

  18. Fast bi-directional prediction selection in H.264/MPEG-4 AVC temporal scalable video coding.

    PubMed

    Lin, Hung-Chih; Hang, Hsueh-Ming; Peng, Wen-Hsiao

    2011-12-01

    In this paper, we propose a fast algorithm that efficiently selects the temporal prediction type for the dyadic hierarchical-B prediction structure in the H.264/MPEG-4 temporal scalable video coding (SVC). We make use of the strong correlations in prediction type inheritance to eliminate the superfluous computations for the bi-directional (BI) prediction in the finer partitions, 16×8/8×16/8×8 , by referring to the best temporal prediction type of 16 × 16. In addition, we carefully examine the relationship in motion bit-rate costs and distortions between the BI and the uni-directional temporal prediction types. As a result, we construct a set of adaptive thresholds to remove the unnecessary BI calculations. Moreover, for the block partitions smaller than 8 × 8, either the forward prediction (FW) or the backward prediction (BW) is skipped based upon the information of their 8 × 8 partitions. Hence, the proposed schemes can efficiently reduce the extensive computational burden in calculating the BI prediction. As compared to the JSVM 9.11 software, our method saves the encoding time from 48% to 67% for a large variety of test videos over a wide range of coding bit-rates and has only a minor coding performance loss.

  19. Sample-adaptive-prediction for HEVC SCC intra coding with ridge estimation from spatially neighboring samples

    NASA Astrophysics Data System (ADS)

    Kang, Je-Won; Ryu, Soo-Kyung

    2017-02-01

    In this paper a sample-adaptive prediction technique is proposed to yield efficient coding performance in an intracoding for screen content video coding. The sample-based prediction is to reduce spatial redundancies in neighboring samples. To this aim, the proposed technique uses a weighted linear combination of neighboring samples and applies the robust optimization technique, namely, ridge estimation to derive the weights in a decoder side. The ridge estimation uses L2 norm based regularization term, and, thus the solution is more robust to high variance samples such as in sharp edges and high color contrasts exhibited in screen content videos. It is demonstrated with the experimental results that the proposed technique provides an improved coding gain as compared to the HEVC screen content video coding reference software.

  20. Predicting non-coding RNA genes in Escherichia coli with boosted genetic programming.

    PubMed

    Saetrom, Pål; Sneve, Ragnhild; Kristiansen, Knut I; Snøve, Ola; Grünfeld, Thomas; Rognes, Torbjørn; Seeberg, Erling

    2005-01-01

    Several methods exist for predicting non-coding RNA (ncRNA) genes in Escherichia coli (E.coli). In addition to about sixty known ncRNA genes excluding tRNAs and rRNAs, various methods have predicted more than thousand ncRNA genes, but only 95 of these candidates were confirmed by more than one study. Here, we introduce a new method that uses automatic discovery of sequence patterns to predict ncRNA genes. The method predicts 135 novel candidates. In addition, the method predicts 152 genes that overlap with predictions in the literature. We test sixteen predictions experimentally, and show that twelve of these are actual ncRNA transcripts. Six of the twelve verified candidates were novel predictions. The relatively high confirmation rate indicates that many of the untested novel predictions are also ncRNAs, and we therefore speculate that E.coli contains more ncRNA genes than previously estimated.

  1. Predicting the influence of the electronic health record on clinical coding practice in hospitals.

    PubMed

    Robinson, Kerin; Shepheard, Jennie

    2004-01-01

    The key drivers of change to clinical coding practice are identified and examined, and a major shift is predicted. The traditional purposes of the coding function have been the provision of data for research and epidemiology, in morbidity data reporting and, latterly, for casemix-based funding. It is contended that, as the development of electronic health records progresses, the need for an embedded nomenclature will force major change in clinical coding practice. Clinical coders must become expert in information technology and analysis, change their work practices, and become an integral part of the clinical team.

  2. EMdeCODE: a novel algorithm capable of reading words of epigenetic code to predict enhancers and retroviral integration sites and to identify H3R2me1 as a distinctive mark of coding versus non-coding genes

    PubMed Central

    Santoni, Federico Andrea

    2013-01-01

    Existence of some extra-genetic (epigenetic) codes has been postulated since the discovery of the primary genetic code. Evident effects of histone post-translational modifications or DNA methylation over the efficiency and the regulation of DNA processes are supporting this postulation. EMdeCODE is an original algorithm that approximate the genomic distribution of given DNA features (e.g. promoter, enhancer, viral integration) by identifying relevant ChIPSeq profiles of post-translational histone marks or DNA binding proteins and combining them in a supermark. EMdeCODE kernel is essentially a two-step procedure: (i) an expectation-maximization process calculates the mixture of epigenetic factors that maximize the Sensitivity (recall) of the association with the feature under study; (ii) the approximated density is then recursively trimmed with respect to a control dataset to increase the precision by reducing the number of false positives. EMdeCODE densities improve significantly the prediction of enhancer loci and retroviral integration sites with respect to previous methods. Importantly, it can also be used to extract distinctive factors between two arbitrary conditions. Indeed EMdeCODE identifies unexpected epigenetic profiles specific for coding versus non-coding RNA, pointing towards a new role for H3R2me1 in coding regions. PMID:23234700

  3. Neural markers of predictive coding under perceptual uncertainty revealed with Hierarchical Frequency Tagging

    PubMed Central

    Gordon, Noam; Koenig-Robert, Roger; Tsuchiya, Naotsugu; van Boxtel, Jeroen JA; Hohwy, Jakob

    2017-01-01

    There is a growing understanding that both top-down and bottom-up signals underlie perception. But it is not known how these signals integrate with each other and how this depends on the perceived stimuli’s predictability. ‘Predictive coding’ theories describe this integration in terms of how well top-down predictions fit with bottom-up sensory input. Identifying neural markers for such signal integration is therefore essential for the study of perception and predictive coding theories. To achieve this, we combined EEG methods that preferentially tag different levels in the visual hierarchy. Importantly, we examined intermodulation components as a measure of integration between these signals. Our results link the different signals to core aspects of predictive coding, and suggest that top-down predictions indeed integrate with bottom-up signals in a manner that is modulated by the predictability of the sensory input, providing evidence for predictive coding and opening new avenues to studying such interactions in perception. DOI: http://dx.doi.org/10.7554/eLife.22749.001 PMID:28244874

  4. TFaNS Tone Fan Noise Design/Prediction System. Volume 3; Evaluation of System Codes

    NASA Technical Reports Server (NTRS)

    Topol, David A.

    1999-01-01

    TFANS is the Tone Fan Noise Design/Prediction System developed by Pratt & Whitney under contract to NASA Lewis (presently NASA Glenn). The purpose of this system is to predict tone noise emanating from a fan stage including the effects of reflection and transmission by the rotor and stator and by the duct inlet and nozzle. These effects have been added to an existing annular duct/isolated stator noise prediction capability. TFANS consists of: The codes that compute the acoustic properties (reflection and transmission coefficients) of the various elements and write them to files. Cup3D: Fan Noise Coupling Code that reads these files, solves the coupling problem, and outputs the desired noise predictions. AWAKEN: CFD/Measured Wake Postprocessor which reformats CFD wake predictions and/or measured wake data so it can be used by the system. This volume of the report evaluates TFANS versus full-scale and ADP 22" fig data using the semi-empirical wake modelling in the system. This report is divided into three volumes: Volume 1: System Description, CUP3D Technical Documentation, and Manual for Code Developers; Volume II: User's Manual, TFANS Version 1.4; Volume III: Evaluation of System Codes.

  5. Application of TURBO-AE to Flutter Prediction: Aeroelastic Code Development

    NASA Technical Reports Server (NTRS)

    Hoyniak, Daniel; Simons, Todd A.; Stefko, George (Technical Monitor)

    2001-01-01

    The TURBO-AE program has been evaluated by comparing the obtained results to cascade rig data and to prediction made from various in-house programs. A high-speed fan cascade, a turbine cascade, a turbine cascade and a fan geometry that shower flutter in torsion mode were analyzed. The steady predictions for the high-speed fan cascade showed the TURBO-AE predictions to match in-house codes. However, the predictions did not match the measured blade surface data. Other researchers also reported similar disagreement with these data set. Unsteady runs for the fan configuration were not successful using TURBO-AE .

  6. Object-adaptive depth compensated inter prediction for depth video coding in 3D video system

    NASA Astrophysics Data System (ADS)

    Kang, Min-Koo; Lee, Jaejoon; Lim, Ilsoon; Ho, Yo-Sung

    2011-01-01

    Nowadays, the 3D video system using the MVD (multi-view video plus depth) data format is being actively studied. The system has many advantages with respect to virtual view synthesis such as an auto-stereoscopic functionality, but compression of huge input data remains a problem. Therefore, efficient 3D data compression is extremely important in the system, and problems of low temporal consistency and viewpoint correlation should be resolved for efficient depth video coding. In this paper, we propose an object-adaptive depth compensated inter prediction method to resolve the problems where object-adaptive mean-depth difference between a current block, to be coded, and a reference block are compensated during inter prediction. In addition, unique properties of depth video are exploited to reduce side information required for signaling decoder to conduct the same process. To evaluate the coding performance, we have implemented the proposed method into MVC (multiview video coding) reference software, JMVC 8.2. Experimental results have demonstrated that our proposed method is especially efficient for depth videos estimated by DERS (depth estimation reference software) discussed in the MPEG 3DV coding group. The coding gain was up to 11.69% bit-saving, and it was even increased when we evaluated it on synthesized views of virtual viewpoints.

  7. The Cortical Organization of Speech Processing: Feedback Control and Predictive Coding the Context of a Dual-Stream Model

    ERIC Educational Resources Information Center

    Hickok, Gregory

    2012-01-01

    Speech recognition is an active process that involves some form of predictive coding. This statement is relatively uncontroversial. What is less clear is the source of the prediction. The dual-stream model of speech processing suggests that there are two possible sources of predictive coding in speech perception: the motor speech system and the…

  8. TRAP/SEE Code Users Manual for Predicting Trapped Radiation Environments

    NASA Astrophysics Data System (ADS)

    Armstrong, T. W.; Colborn, B. L.

    2000-01-01

    TRAP/SEE is a PC-based computer code with a user-friendly interface which predicts the ionizing radiation exposure of spacecraft having orbits in the Earth's trapped radiation belts. The code incorporates the standard AP8 and AE8 trapped proton and electron models but also allows application of an improved database interpolation method. The code treats low-Earth as well as highly-elliptical Earth orbits, taking into account trajectory perturbations due to gravitational forces from the Moon and Sun, atmospheric drag, and solar radiation pressure. Orbit-average spectra, peak spectra per orbit, and instantaneous spectra at points along the orbit trajectory are calculated. Described in this report are the features, models, model limitations and uncertainties, input and output descriptions, and example calculations and applications for the TRAP/SEE code.

  9. User's manual for the ALS base heating prediction code, volume 2

    NASA Technical Reports Server (NTRS)

    Reardon, John E.; Fulton, Michael S.

    1992-01-01

    The Advanced Launch System (ALS) Base Heating Prediction Code is based on a generalization of first principles in the prediction of plume induced base convective heating and plume radiation. It should be considered to be an approximate method for evaluating trends as a function of configuration variables because the processes being modeled are too complex to allow an accurate generalization. The convective methodology is based upon generalizing trends from four nozzle configurations, so an extension to use the code with strap-on boosters, multiple nozzle sizes, and variations in the propellants and chamber pressure histories cannot be precisely treated. The plume radiation is more amenable to precise computer prediction, but simplified assumptions are required to model the various aspects of the candidate configurations. Perhaps the most difficult area to characterize is the variation of radiation with altitude. The theory in the radiation predictions is described in more detail. This report is intended to familiarize a user with the interface operation and options, to summarize the limitations and restrictions of the code, and to provide information to assist in installing the code.

  10. Dopamine Modulates Adaptive Prediction Error Coding in the Human Midbrain and Striatum

    PubMed Central

    Ziauddeen, Hisham; Vestergaard, Martin D.; Spencer, Tom

    2017-01-01

    Learning to optimally predict rewards requires agents to account for fluctuations in reward value. Recent work suggests that individuals can efficiently learn about variable rewards through adaptation of the learning rate, and coding of prediction errors relative to reward variability. Such adaptive coding has been linked to midbrain dopamine neurons in nonhuman primates, and evidence in support for a similar role of the dopaminergic system in humans is emerging from fMRI data. Here, we sought to investigate the effect of dopaminergic perturbations on adaptive prediction error coding in humans, using a between-subject, placebo-controlled pharmacological fMRI study with a dopaminergic agonist (bromocriptine) and antagonist (sulpiride). Participants performed a previously validated task in which they predicted the magnitude of upcoming rewards drawn from distributions with varying SDs. After each prediction, participants received a reward, yielding trial-by-trial prediction errors. Under placebo, we replicated previous observations of adaptive coding in the midbrain and ventral striatum. Treatment with sulpiride attenuated adaptive coding in both midbrain and ventral striatum, and was associated with a decrease in performance, whereas bromocriptine did not have a significant impact. Although we observed no differential effect of SD on performance between the groups, computational modeling suggested decreased behavioral adaptation in the sulpiride group. These results suggest that normal dopaminergic function is critical for adaptive prediction error coding, a key property of the brain thought to facilitate efficient learning in variable environments. Crucially, these results also offer potential insights for understanding the impact of disrupted dopamine function in mental illness. SIGNIFICANCE STATEMENT To choose optimally, we have to learn what to expect. Humans dampen learning when there is a great deal of variability in reward outcome, and two brain regions that

  11. Dopamine Modulates Adaptive Prediction Error Coding in the Human Midbrain and Striatum.

    PubMed

    Diederen, Kelly M J; Ziauddeen, Hisham; Vestergaard, Martin D; Spencer, Tom; Schultz, Wolfram; Fletcher, Paul C

    2017-02-15

    Learning to optimally predict rewards requires agents to account for fluctuations in reward value. Recent work suggests that individuals can efficiently learn about variable rewards through adaptation of the learning rate, and coding of prediction errors relative to reward variability. Such adaptive coding has been linked to midbrain dopamine neurons in nonhuman primates, and evidence in support for a similar role of the dopaminergic system in humans is emerging from fMRI data. Here, we sought to investigate the effect of dopaminergic perturbations on adaptive prediction error coding in humans, using a between-subject, placebo-controlled pharmacological fMRI study with a dopaminergic agonist (bromocriptine) and antagonist (sulpiride). Participants performed a previously validated task in which they predicted the magnitude of upcoming rewards drawn from distributions with varying SDs. After each prediction, participants received a reward, yielding trial-by-trial prediction errors. Under placebo, we replicated previous observations of adaptive coding in the midbrain and ventral striatum. Treatment with sulpiride attenuated adaptive coding in both midbrain and ventral striatum, and was associated with a decrease in performance, whereas bromocriptine did not have a significant impact. Although we observed no differential effect of SD on performance between the groups, computational modeling suggested decreased behavioral adaptation in the sulpiride group. These results suggest that normal dopaminergic function is critical for adaptive prediction error coding, a key property of the brain thought to facilitate efficient learning in variable environments. Crucially, these results also offer potential insights for understanding the impact of disrupted dopamine function in mental illness.SIGNIFICANCE STATEMENT To choose optimally, we have to learn what to expect. Humans dampen learning when there is a great deal of variability in reward outcome, and two brain regions that

  12. Validation of Framework Code Approach to a Life Prediction System for Fiber Reinforced Composites

    NASA Technical Reports Server (NTRS)

    Gravett, Phillip

    1997-01-01

    The grant was conducted by the MMC Life Prediction Cooperative, an industry/government collaborative team, Ohio Aerospace Institute (OAI) acted as the prime contractor on behalf of the Cooperative for this grant effort. See Figure I for the organization and responsibilities of team members. The technical effort was conducted during the period August 7, 1995 to June 30, 1996 in cooperation with Erwin Zaretsky, the LERC Program Monitor. Phil Gravett of Pratt & Whitney was the principal technical investigator. Table I documents all meeting-related coordination memos during this period. The effort under this grant was closely coordinated with an existing USAF sponsored program focused on putting into practice a life prediction system for turbine engine components made of metal matrix composites (MMC). The overall architecture of the NMC life prediction system was defined in the USAF sponsored program (prior to this grant). The efforts of this grant were focussed on implementing and tailoring of the life prediction system, the framework code within it and the damage modules within it to meet the specific requirements of the Cooperative. T'he tailoring of the life prediction system provides the basis for pervasive and continued use of this capability by the industry/government cooperative. The outputs of this grant are: 1. Definition of the framework code to analysis modules interfaces, 2. Definition of the interface between the materials database and the finite element model, and 3. Definition of the integration of the framework code into an FEM design tool.

  13. Efficient Prediction Structures for H.264 Multi View Coding Using Temporal Scalability

    NASA Astrophysics Data System (ADS)

    Guruvareddiar, Palanivel; Joseph, Biju K.

    2014-03-01

    Prediction structures with "disposable view components based" hierarchical coding have been proven to be efficient for H.264 multi view coding. Though these prediction structures along with the QP cascading schemes provide superior compression efficiency when compared to the traditional IBBP coding scheme, the temporal scalability requirements of the bit stream could not be met to the fullest. On the other hand, a fully scalable bit stream, obtained by "temporal identifier based" hierarchical coding, provides a number of advantages including bit rate adaptations and improved error resilience, but lacks in compression efficiency when compared to the former scheme. In this paper it is proposed to combine the two approaches such that a fully scalable bit stream could be realized with minimal reduction in compression efficiency when compared to state-of-the-art "disposable view components based" hierarchical coding. Simulation results shows that the proposed method enables full temporal scalability with maximum BDPSNR reduction of only 0.34 dB. A novel method also has been proposed for the identification of temporal identifier for the legacy H.264/AVC base layer packets. Simulation results also show that this enables the scenario where the enhancement views could be extracted at a lower frame rate (1/2nd or 1/4th of base view) with average extraction time for a view component of only 0.38 ms.

  14. Predictive Coding: A Possible Explanation of Filling-In at the Blind Spot

    PubMed Central

    Raman, Rajani; Sarkar, Sandip

    2016-01-01

    Filling-in at the blind spot is a perceptual phenomenon in which the visual system fills the informational void, which arises due to the absence of retinal input corresponding to the optic disc, with surrounding visual attributes. It is known that during filling-in, nonlinear neural responses are observed in the early visual area that correlates with the perception, but the knowledge of underlying neural mechanism for filling-in at the blind spot is far from complete. In this work, we attempted to present a fresh perspective on the computational mechanism of filling-in process in the framework of hierarchical predictive coding, which provides a functional explanation for a range of neural responses in the cortex. We simulated a three-level hierarchical network and observe its response while stimulating the network with different bar stimulus across the blind spot. We find that the predictive-estimator neurons that represent blind spot in primary visual cortex exhibit elevated non-linear response when the bar stimulated both sides of the blind spot. Using generative model, we also show that these responses represent the filling-in completion. All these results are consistent with the finding of psychophysical and physiological studies. In this study, we also demonstrate that the tolerance in filling-in qualitatively matches with the experimental findings related to non-aligned bars. We discuss this phenomenon in the predictive coding paradigm and show that all our results could be explained by taking into account the efficient coding of natural images along with feedback and feed-forward connections that allow priors and predictions to co-evolve to arrive at the best prediction. These results suggest that the filling-in process could be a manifestation of the general computational principle of hierarchical predictive coding of natural images. PMID:26959812

  15. Prediction error as a linear function of reward probability is coded in human nucleus accumbens.

    PubMed

    Abler, Birgit; Walter, Henrik; Erk, Susanne; Kammerer, Hannes; Spitzer, Manfred

    2006-06-01

    Reward probability has been shown to be coded by dopamine neurons in monkeys. Phasic neuronal activation not only increased linearly with reward probability upon expectation of reward, but also varied monotonically across the range of probabilities upon omission or receipt of rewards, therefore modeling discrepancies between expected and received rewards. Such a discrete coding of prediction error has been suggested to be one of the basic principles of learning. We used functional magnetic resonance imaging (fMRI) to show that the human dopamine system codes reward probability and prediction error in a similar way. We used a simple delayed incentive task with a discrete range of reward probabilities from 0%-100%. Activity in the nucleus accumbens of human subjects strongly resembled the phasic responses found in monkey neurons. First, during the expectation period of the task, the fMRI signal in the human nucleus accumbens (NAc) increased linearly with the probability of the reward. Second, during the outcome phase, activity in the NAc coded the prediction error as a linear function of reward probabilities. Third, we found that the Nac signal was correlated with individual differences in sensation seeking and novelty seeking, indicating a link between individual fMRI activation of the dopamine system in a probabilistic paradigm and personality traits previously suggested to be linked with reward processing. We therefore identify two different covariates that model activity in the Nac: specific properties of a psychological task and individual character traits.

  16. Accretion Disks in Algols: Progenitors and Evolution

    NASA Astrophysics Data System (ADS)

    van Rensbergen, W.; de Greve, J. P.

    2017-02-01

    There are only a few Algols with derived accretion disk parameters. These measurements provide additional constraints for tracing the origin of individual systems. With a modified binary evolution code, series of close binary evolution were calculated. For six Algols with accretion disks we found initial systems that evolve closely into the presently observed system parameters and disk characteristics.

  17. Using a Statistical Accretion Model to Predict the Existence of Undetected Moons around Uranus in the Vicinity of Mab

    NASA Astrophysics Data System (ADS)

    Kumar, Kartik; Benet, L.; Mena, C. H.; de Pater, I.; Showalter, M. R.; Ambrosius, B. A. C.; Schrama, E. J. O.; Visser, P. N. A. M.

    2010-05-01

    Showalter and Lissauer announced the discovery of an outer ring system around Uranus, in 2006. An accompanying small moon Mab was also detected (Showalter and Lissauer, 2006). They derived its orbital position from both Voyager flyby (1986) and HST (2003-2006) data and showed that its orbit is poorly understood. They compared the observed positions with an orbital model that includes gravitational flattening of Uranus. Although this model works well for nine other Uranian moons, for Mab the fitting errors of the observed orbital motion are six times larger. This indicates that we are currently overlooking an essential part of the dynamics that determine the orbit of Mab. They also demonstrated that the known Uranian moons do not serve as a source of the perturbation of its orbit. Are there undetected bodies in the Uranian system that affect Mab's orbit? In this study, we applied a statistical accretion model (SAM) (Laskar, 2000) to determine the presence of undetected moons in the vicinity of Mab. We used a modified version of the model, including different aggregation criteria and employing conservation of total angular momentum (Mena and Benet, 2010). This model has been primarily used to simulate the evolution of the solar system, in the secular limit. Chaotic motion is promoted through the use of a Brownian motion mechanism. We incorporated an additional simple resonance mechanism to determine interaction with Mab. We also addressed challenges associated with applying this model to a thin, near-circular disc. We used the results of the SAM to run time-integration simulations, to analyze whether the actual effect of the accreted moons can be used to elucidate Mab's peculiar motion. We present preliminary results indicating the likely number of bodies in the neighbourhood of Mab, based on known observations of the variation of its orbit.

  18. A comparison of shuttle vernier engine plume contamination with CONTAM 3.4 code predictions

    NASA Technical Reports Server (NTRS)

    Maag, Carl R.; Jones, Thomas M.; Rao, Shankar M.; Linder, W. Kelly

    1992-01-01

    In 1985, using the CONTAM 3.2 code, it was predicted that the shuttle Primary Reaction Control System (PRCS) and Vernier Reaction Control System (VRCS) engines could be potential contamination sources to sensitive surfaces located within the shuttle payload bay. Spaceflight test data on these engines is quite limited. Shuttle mission STS-32, the Long Duration Exposure Facility retrieval mission, was instrumented with an experiment that provided the design engineer with evidence that contaminant species from the VRCS engines can enter the payload bay. More recently, the most recent version of the analysis code, CONTAM 3.4, has re-examined the contamination potential of these engines.

  19. Specification and Prediction of the Radiation Environment Using Data Assimilative VERB code

    NASA Astrophysics Data System (ADS)

    Shprits, Yuri; Kellerman, Adam

    2016-07-01

    We discuss how data assimilation can be used for the reconstruction of long-term evolution, bench-marking of the physics based codes and used to improve the now-casting and focusing of the radiation belts and ring current. We also discuss advanced data assimilation methods such as parameter estimation and smoothing. We present a number of data assimilation applications using the VERB 3D code. The 3D data assimilative VERB allows us to blend together data from GOES, RBSP A and RBSP B. 1) Model with data assimilation allows us to propagate data to different pitch angles, energies, and L-shells and blends them together with the physics-based VERB code in an optimal way. We illustrate how to use this capability for the analysis of the previous events and for obtaining a global and statistical view of the system. 2) The model predictions strongly depend on initial conditions that are set up for the model. Therefore, the model is as good as the initial conditions that it uses. To produce the best possible initial conditions, data from different sources (GOES, RBSP A, B, our empirical model predictions based on ACE) are all blended together in an optimal way by means of data assimilation, as described above. The resulting initial conditions do not have gaps. This allows us to make more accurate predictions. Real-time prediction framework operating on our website, based on GOES, RBSP A, B and ACE data, and 3D VERB, is presented and discussed.

  20. The basal ganglia select the expected sensory input used for predictive coding.

    PubMed

    Colder, Brian

    2015-01-01

    While considerable evidence supports the notion that lower-level interpretation of incoming sensory information is guided by top-down sensory expectations, less is known about the source of the sensory expectations or the mechanisms by which they are spread. Predictive coding theory proposes that sensory expectations flow down from higher-level association areas to lower-level sensory cortex. A separate theory of the role of prediction in cognition describes "emulations" as linked representations of potential actions and their associated expected sensation that are hypothesized to play an important role in many aspects of cognition. The expected sensations in active emulations are proposed to be the top-down expectation used in predictive coding. Representations of the potential action and expected sensation in emulations are claimed to be instantiated in distributed cortical networks. Combining predictive coding with emulations thus provides a theoretical link between the top-down expectations that guide sensory expectations and the cortical networks representing potential actions. Now moving to theories of action selection, the basal ganglia has long been proposed to select between potential actions by reducing inhibition to the cortical network instantiating the desired action plan. Integration of these isolated theories leads to the novel hypothesis that reduction in inhibition from the basal ganglia selects not just action plans, but entire emulations, including the sensory input expected to result from the action. Basal ganglia disinhibition is hypothesized to both initiate an action and also allow propagation of the action's associated sensory expectation down towards primary sensory cortex. This is a novel proposal for the role of the basal ganglia in biasing perception by selecting the expected sensation, and initiating the top-down transmission of those expectations in predictive coding.

  1. Hyperbolic Space Sparse Coding with Its Application on Prediction of Alzheimer's Disease in Mild Cognitive Impairment.

    PubMed

    Zhang, Jie; Shi, Jie; Stonnington, Cynthia; Li, Qingyang; Gutman, Boris A; Chen, Kewei; Reiman, Eric M; Caselli, Richard J; Thompson, Paul M; Ye, Jieping; Wang, Yalin

    2016-10-01

    Mild Cognitive Impairment (MCI) is a transitional stage between normal age-related cognitive decline and Alzheimer's disease (AD). Here we introduce a hyperbolic space sparse coding method to predict impending decline of MCI patients to dementia using surface measures of ventricular enlargement. First, we compute diffeomorphic mappings between ventricular surfaces using a canonical hyperbolic parameter space with consistent boundary conditions and surface tensor-based morphometry is computed to measure local surface deformations. Second, ring-shaped patches of TBM features are selected according to the geometric structure of the hyperbolic parameter space to initialize a dictionary. Sparse coding is then applied on the patch features to learn sparse codes and update the dictionary. Finally, we adopt max-pooling to reduce the feature dimensions and apply Adaboost to predict AD in MCI patients (N = 133) from the Alzheimer's Disease Neuroimaging Initiative baseline dataset. Our work achieved an accuracy rate of 96.7% and outperformed some other morphometry measures. The hyperbolic space sparse coding method may offer a more sensitive tool to study AD and its early symptom.

  2. Structural Life and Reliability Metrics: Benchmarking and Verification of Probabilistic Life Prediction Codes

    NASA Technical Reports Server (NTRS)

    Litt, Jonathan S.; Soditus, Sherry; Hendricks, Robert C.; Zaretsky, Erwin V.

    2002-01-01

    Over the past two decades there has been considerable effort by NASA Glenn and others to develop probabilistic codes to predict with reasonable engineering certainty the life and reliability of critical components in rotating machinery and, more specifically, in the rotating sections of airbreathing and rocket engines. These codes have, to a very limited extent, been verified with relatively small bench rig type specimens under uniaxial loading. Because of the small and very narrow database the acceptance of these codes within the aerospace community has been limited. An alternate approach to generating statistically significant data under complex loading and environments simulating aircraft and rocket engine conditions is to obtain, catalog and statistically analyze actual field data. End users of the engines, such as commercial airlines and the military, record and store operational and maintenance information. This presentation describes a cooperative program between the NASA GRC, United Airlines, USAF Wright Laboratory, U.S. Army Research Laboratory and Australian Aeronautical & Maritime Research Laboratory to obtain and analyze these airline data for selected components such as blades, disks and combustors. These airline data will be used to benchmark and compare existing life prediction codes.

  3. Prediction of material strength and fracture of glass using the SPHINX smooth particle hydrodynamics code

    SciTech Connect

    Mandell, D.A.; Wingate, C.A.

    1994-08-01

    The design of many military devices involves numerical predictions of the material strength and fracture of brittle materials. The materials of interest include ceramics, that are used in armor packages; glass that is used in truck and jeep windshields and in helicopters; and rock and concrete that are used in underground bunkers. As part of a program to develop advanced hydrocode design tools, the authors have implemented a brittle fracture model for glass into the SPHINX smooth particle hydrodynamics code. The authors have evaluated this model and the code by predicting data from one-dimensional flyer plate impacts into glass, and data from tungsten rods impacting glass. Since fractured glass properties, which are needed in the model, are not available, the authors did sensitivity studies of these properties, as well as sensitivity studies to determine the number of particles needed in the calculations. The numerical results are in good agreement with the data.

  4. A Cerebellar Framework for Predictive Coding and Homeostatic Regulation in Depressive Disorder.

    PubMed

    Schutter, Dennis J L G

    2016-02-01

    Depressive disorder is associated with abnormalities in the processing of reward and punishment signals and disturbances in homeostatic regulation. These abnormalities are proposed to impair error minimization routines for reducing uncertainty. Several lines of research point towards a role of the cerebellum in reward- and punishment-related predictive coding and homeostatic regulatory function in depressive disorder. Available functional and anatomical evidence suggests that in addition to the cortico-limbic networks, the cerebellum is part of the dysfunctional brain circuit in depressive disorder as well. It is proposed that impaired cerebellar function contributes to abnormalities in predictive coding and homeostatic dysregulation in depressive disorder. Further research on the role of the cerebellum in depressive disorder may further extend our knowledge on the functional and neural mechanisms of depressive disorder and development of novel antidepressant treatments strategies targeting the cerebellum.

  5. Severe accident source term characteristics for selected Peach Bottom sequences predicted by the MELCOR Code

    SciTech Connect

    Carbajo, J.J.

    1993-09-01

    The purpose of this report is to compare in-containment source terms developed for NUREG-1159, which used the Source Term Code Package (STCP), with those generated by MELCOR to identify significant differences. For this comparison, two short-term depressurized station blackout sequences (with a dry cavity and with a flooded cavity) and a Loss-of-Coolant Accident (LOCA) concurrent with complete loss of the Emergency Core Cooling System (ECCS) were analyzed for the Peach Bottom Atomic Power Station (a BWR-4 with a Mark I containment). The results indicate that for the sequences analyzed, the two codes predict similar total in-containment release fractions for each of the element groups. However, the MELCOR/CORBH Package predicts significantly longer times for vessel failure and reduced energy of the released material for the station blackout sequences (when compared to the STCP results). MELCOR also calculated smaller releases into the environment than STCP for the station blackout sequences.

  6. SIM_ADJUST -- A computer code that adjusts simulated equivalents for observations or predictions

    USGS Publications Warehouse

    Poeter, Eileen P.; Hill, Mary C.

    2008-01-01

    This report documents the SIM_ADJUST computer code. SIM_ADJUST surmounts an obstacle that is sometimes encountered when using universal model analysis computer codes such as UCODE_2005 (Poeter and others, 2005), PEST (Doherty, 2004), and OSTRICH (Matott, 2005; Fredrick and others (2007). These codes often read simulated equivalents from a list in a file produced by a process model such as MODFLOW that represents a system of interest. At times values needed by the universal code are missing or assigned default values because the process model could not produce a useful solution. SIM_ADJUST can be used to (1) read a file that lists expected observation or prediction names and possible alternatives for the simulated values; (2) read a file produced by a process model that contains space or tab delimited columns, including a column of simulated values and a column of related observation or prediction names; (3) identify observations or predictions that have been omitted or assigned a default value by the process model; and (4) produce an adjusted file that contains a column of simulated values and a column of associated observation or prediction names. The user may provide alternatives that are constant values or that are alternative simulated values. The user may also provide a sequence of alternatives. For example, the heads from a series of cells may be specified to ensure that a meaningful value is available to compare with an observation located in a cell that may become dry. SIM_ADJUST is constructed using modules from the JUPITER API, and is intended for use on any computer operating system. SIM_ADJUST consists of algorithms programmed in Fortran90, which efficiently performs numerical calculations.

  7. Results from baseline tests of the SPRE I and comparison with code model predictions

    SciTech Connect

    Cairelli, J.E.; Geng, S.M.; Skupinski, R.C.

    1994-09-01

    The Space Power Research Engine (SPRE), a free-piston Stirling engine with linear alternator, is being tested at the NASA Lewis Research Center as part of the Civil Space Technology Initiative (CSTI) as a candidate for high capacity space power. This paper presents results of base-line engine tests at design and off-design operating conditions. The test results are compared with code model predictions.

  8. ACCRETION OUTBURSTS IN CIRCUMPLANETARY DISKS

    SciTech Connect

    Lubow, S. H.; Martin, R. G.

    2012-04-20

    We describe a model for the long-term evolution of a circumplanetary disk that is fed mass from a circumstellar disk and contains regions of low turbulence (dead zones). We show that such disks can be subject to accretion-driven outbursts, analogous to outbursts previously modeled in the context of circumstellar disks to explain FU Ori phenomena. Circumplanetary disks around a proto-Jupiter can undergo outbursts for infall accretion rates onto the disks in the range M-dot{sub infall} approx. 10{sup -9} to 10{sup -7} M{sub Sun} yr{sup -1}, typical of accretion rates in the T Tauri phase. During outbursts, the accretion rate and disk luminosity increases by several orders of magnitude. Most of the planet mass growth during planetary gas accretion may occur via disk outbursts involving gas that is considerably hotter than predicted by steady state models. For low infall accretion rates M-dot{sub infall} {approx}< 10{sup -10} M{sub sun} yr{sup -1} that occur in late stages of disk accretion, disk outbursts are unlikely to occur, even if dead zones are present. Such conditions are favorable for the formation of icy satellites.

  9. Predicting multi-wall structural response to hypervelocity impact using the hull code

    NASA Technical Reports Server (NTRS)

    Schonberg, William P.

    1993-01-01

    Previously, multi-wall structures have been analyzed extensively, primarily through experiment, as a means of increasing the meteoroid/space debris impact protection of spacecraft. As structural configurations become more varied, the number of tests required to characterize their response increases dramatically. As an alternative to experimental testing, numerical modeling of high-speed impact phenomena is often being used to predict the response of a variety of structural systems under different impact loading conditions. The results of comparing experimental tests to Hull Hydrodynamic Computer Code predictions are reported. Also, the results of a numerical parametric study of multi-wall structural response to hypervelocity cylindrical projectile impact are presented.

  10. How do accretion discs break?

    NASA Astrophysics Data System (ADS)

    Dogan, Suzan

    2016-07-01

    Accretion discs are common in binary systems, and they are often found to be misaligned with respect to the binary orbit. The gravitational torque from a companion induces nodal precession in misaligned disc orbits. In this study, we first calculate whether this precession is strong enough to overcome the internal disc torques communicating angular momentum. We compare the disc precession torque with the disc viscous torque to determine whether the disc should warp or break. For typical parameters precession wins: the disc breaks into distinct planes that precess effectively independently. To check our analytical findings, we perform 3D hydrodynamical numerical simulations using the PHANTOM smoothed particle hydrodynamics code, and confirm that disc breaking is widespread and enhances accretion on to the central object. For some inclinations, the disc goes through strong Kozai cycles. Disc breaking promotes markedly enhanced and variable accretion and potentially produces high-energy particles or radiation through shocks. This would have significant implications for all binary systems: e.g. accretion outbursts in X-ray binaries and fuelling supermassive black hole (SMBH) binaries. The behaviour we have discussed in this work is relevant to a variety of astrophysical systems, for example X-ray binaries, where the disc plane may be tilted by radiation warping, SMBH binaries, where accretion of misaligned gas can create effectively random inclinations and protostellar binaries, where a disc may be misaligned by a variety of effects such as binary capture/exchange, accretion after binary formation.

  11. Application Of A Statistical Accretion Model To Predict Undetected Moons Around Uranus In The Vicinity Of Mab

    NASA Astrophysics Data System (ADS)

    Kumar, Kartik; Benet, L.; Mena, C. H.; de Pater, I.; Showalter, M. R.

    2010-10-01

    In 2006, Showalter and Lissauer announced the discovery of the mu-ring around Uranus and a accompanying small moon Mab (Showalter and Lissauer, 2006). They derived the orbital position of Mab from both Voyager flyby (1986) and HST (2003-2006) data and showed that it is poorly understood. The observed positions were compared against an orbital model that includes gravitational flattening of Uranus. Although this model works well for nine other Uranian moons, for Mab the fitting errors of the observed orbital motion are six times larger. This indicates that we are currently overlooking an essential part of the dynamics that determine the orbit of Mab. Known moons in the Uranian system do not perturb Mab sufficiently to account for the fitting anomalies. Are there undetected bodies in the Uranian system that affect Mab's orbit? In a previous study (Kumar et al., 2010), we applied a statistical accretion model (SAM) (Laskar, 2000) to determine the presence of undetected moons in the vicinity of Mab. We used a modified SAM, including different aggregation criteria and employing conservation of total angular momentum (Mena and Benet, 2010). This model has been primarily used to simulate the evolution of the solar system, in the secular limit. The results of our initial simulations indicated that the environment around Mab is efficiently cleared such that only three to four large bodies remain when the simulations terminate (when the disc is collision-free). Observational constraints however imply that there must be more bodies in the neighbourhood of Mab. Hence, the suggestion is that the environment around Mab might not be collision-free. We revisit the previously obtained results and analyze configurations of additional moons near Mab for systems that still contain collision geometries. Based on this new analysis, we indicate the likely configuration of undetected bodies in the neighbourhood of Mab.

  12. Modeling the Effects of Ice Accretion on the Low Pressure Compressor and the Overall Turbofan Engine System Performance

    NASA Technical Reports Server (NTRS)

    Veres, Joseph P.; Jorgenson, Philip C. E.; Wright, William B.

    2011-01-01

    The focus of this study is on utilizing a mean line compressor flow analysis code coupled to an engine system thermodynamic code, to estimate the effects of ice accretion on the low pressure compressor, and quantifying its effects on the engine system throughout a notional flight trajectory. In this paper a temperature range in which engine icing would occur was assumed. This provided a mechanism to locate potential component icing sites and allow the computational tools to add blockages due to ice accretion in a parametric fashion. Ultimately the location and level of blockage due to icing would be provided by an ice accretion code. To proceed, an engine system modeling code and a mean line compressor flow analysis code were utilized to calculate the flow conditions in the fan-core and low pressure compressor and to identify potential locations within the compressor where ice may accrete. In this study, an "additional blockage" due to the accretion of ice on the metal surfaces, has been added to the baseline aerodynamic blockage due to boundary layer, as well as the blade metal blockage. Once the potential locations of ice accretion are identified, the levels of additional blockage due to accretion were parametrically varied to estimate the effects on the low pressure compressor blade row performance operating within the engine system environment. This study includes detailed analysis of compressor and engine performance during cruise and descent operating conditions at several altitudes within the notional flight trajectory. The purpose of this effort is to develop the computer codes to provide a predictive capability to forecast the onset of engine icing events, such that they could ultimately help in the avoidance of these events.

  13. A high temperature fatigue life prediction computer code based on the total strain version of StrainRange Partitioning (SRP)

    NASA Astrophysics Data System (ADS)

    McGaw, Michael A.; Saltsman, James F.

    1993-10-01

    A recently developed high-temperature fatigue life prediction computer code is presented and an example of its usage given. The code discussed is based on the Total Strain version of Strainrange Partitioning (TS-SRP). Included in this code are procedures for characterizing the creep-fatigue durability behavior of an alloy according to TS-SRP guidelines and predicting cyclic life for complex cycle types for both isothermal and thermomechanical conditions. A reasonably extensive materials properties database is included with the code.

  14. A high temperature fatigue life prediction computer code based on the total strain version of StrainRange Partitioning (SRP)

    NASA Technical Reports Server (NTRS)

    Mcgaw, Michael A.; Saltsman, James F.

    1993-01-01

    A recently developed high-temperature fatigue life prediction computer code is presented and an example of its usage given. The code discussed is based on the Total Strain version of Strainrange Partitioning (TS-SRP). Included in this code are procedures for characterizing the creep-fatigue durability behavior of an alloy according to TS-SRP guidelines and predicting cyclic life for complex cycle types for both isothermal and thermomechanical conditions. A reasonably extensive materials properties database is included with the code.

  15. Star formation sustained by gas accretion

    NASA Astrophysics Data System (ADS)

    Sánchez Almeida, Jorge; Elmegreen, Bruce G.; Muñoz-Tuñón, Casiana; Elmegreen, Debra Meloy

    2014-07-01

    Numerical simulations predict that metal-poor gas accretion from the cosmic web fuels the formation of disk galaxies. This paper discusses how cosmic gas accretion controls star formation, and summarizes the physical properties expected for the cosmic gas accreted by galaxies. The paper also collects observational evidence for gas accretion sustaining star formation. It reviews evidence inferred from neutral and ionized hydrogen, as well as from stars. A number of properties characterizing large samples of star-forming galaxies can be explained by metal-poor gas accretion, in particular, the relationship among stellar mass, metallicity, and star-formation rate (the so-called fundamental metallicity relationship). They are put forward and analyzed. Theory predicts gas accretion to be particularly important at high redshift, so indications based on distant objects are reviewed, including the global star-formation history of the universe, and the gas around galaxies as inferred from absorption features in the spectra of background sources.

  16. Thought Insertion as a Self-Disturbance: An Integration of Predictive Coding and Phenomenological Approaches

    PubMed Central

    Sterzer, Philipp; Mishara, Aaron L.; Voss, Martin; Heinz, Andreas

    2016-01-01

    Current theories in the framework of hierarchical predictive coding propose that positive symptoms of schizophrenia, such as delusions and hallucinations, arise from an alteration in Bayesian inference, the term inference referring to a process by which learned predictions are used to infer probable causes of sensory data. However, for one particularly striking and frequent symptom of schizophrenia, thought insertion, no plausible account has been proposed in terms of the predictive-coding framework. Here we propose that thought insertion is due to an altered experience of thoughts as coming from “nowhere”, as is already indicated by the early 20th century phenomenological accounts by the early Heidelberg School of psychiatry. These accounts identified thought insertion as one of the self-disturbances (from German: “Ichstörungen”) of schizophrenia and used mescaline as a model-psychosis in healthy individuals to explore the possible mechanisms. The early Heidelberg School (Gruhle, Mayer-Gross, Beringer) first named and defined the self-disturbances, and proposed that thought insertion involves a disruption of the inner connectedness of thoughts and experiences, and a “becoming sensory” of those thoughts experienced as inserted. This account offers a novel way to integrate the phenomenology of thought insertion with the predictive coding framework. We argue that the altered experience of thoughts may be caused by a reduced precision of context-dependent predictions, relative to sensory precision. According to the principles of Bayesian inference, this reduced precision leads to increased prediction-error signals evoked by the neural activity that encodes thoughts. Thus, in analogy with the prediction-error related aberrant salience of external events that has been proposed previously, “internal” events such as thoughts (including volitions, emotions and memories) can also be associated with increased prediction-error signaling and are thus imbued

  17. Rotor Wake/Stator Interaction Noise Prediction Code Technical Documentation and User's Manual

    NASA Technical Reports Server (NTRS)

    Topol, David A.; Mathews, Douglas C.

    2010-01-01

    This report documents the improvements and enhancements made by Pratt & Whitney to two NASA programs which together will calculate noise from a rotor wake/stator interaction. The code is a combination of subroutines from two NASA programs with many new features added by Pratt & Whitney. To do a calculation V072 first uses a semi-empirical wake prediction to calculate the rotor wake characteristics at the stator leading edge. Results from the wake model are then automatically input into a rotor wake/stator interaction analytical noise prediction routine which calculates inlet aft sound power levels for the blade-passage-frequency tones and their harmonics, along with the complex radial mode amplitudes. The code allows for a noise calculation to be performed for a compressor rotor wake/stator interaction, a fan wake/FEGV interaction, or a fan wake/core stator interaction. This report is split into two parts, the first part discusses the technical documentation of the program as improved by Pratt & Whitney. The second part is a user's manual which describes how input files are created and how the code is run.

  18. Simulation study of HL-2A-like plasma using integrated predictive modeling code

    SciTech Connect

    Poolyarat, N.; Onjun, T.; Promping, J.

    2009-11-15

    Self-consistent simulations of HL-2A-like plasma are carried out using 1.5D BALDUR integrated predictive modeling code. In these simulations, the core transport is predicted using the combination of Multi-mode (MMM95) anomalous core transport model and NCLASS neoclassical transport model. The evolution of plasma current, temperature and density is carried out. Consequently, the plasma current, temperature and density profiles, as well as other plasma parameters, are obtained as the predictions in each simulation. It is found that temperature and density profiles in these simulations are peak near the plasma center. In addition, the sawtooth period is studied using the Porcilli model and is found that before, during, and after the electron cyclotron resonance heating (ECRH) operation the sawtooth period are approximately the same. It is also observed that the mixing radius of sawtooth crashes is reduced during the ECRH operation.

  19. A modified prediction scheme of the H.264 multiview video coding to improve the decoder performance

    NASA Astrophysics Data System (ADS)

    Hamadan, Ayman M.; Aly, Hussein A.; Fouad, Mohamed M.; Dansereau, Richard M.

    2013-02-01

    In this paper, we present a modified inter-view prediction scheme for the multiview video coding (MVC).With more inter-view prediction, the number of reference frames required to decode a single view increase. Consequently, the data size of decoding a single view increases, thus impacting the decoder performance. In this paper, we propose an MVC scheme that requires less inter-view prediction than that of the MVC standard scheme. The proposed scheme is implemented and tested on real multiview video sequences. Improvements are shown using the proposed scheme in terms of average data size required either to decode a single view, or to access any frame (i.e., random access), with comparable rate-distortion. It is compared to the MVC standard scheme and another improved techniques from the literature.

  20. Ice accretion modeling for wind turbine rotor blades

    SciTech Connect

    Chocron, D.; Brahimi, T.; Paraschivoiu, I.; Bombardier, J.A.

    1997-12-31

    The increasing application of wind energy in northern climates implies operation of wind turbines under severe atmospheric icing conditions. Such conditions are well known in the Scandinavian countries, Canada and most of Eastern European countries. An extensive study to develop a procedure for the prediction of ice accretion on wind turbines rotor blades appears to be essential for the safe and economic operation of wind turbines in these cold regions. The objective of the present paper is to develop a computer code capable of simulating the shape and amount of ice which may accumulate on horizontal axis wind turbine blades when operating in icing conditions. The resulting code is capable to predict and simulate the formation of ice in rime and glaze conditions, calculate the flow field and particle trajectories and to perform thermodynamic analysis. It also gives the possibility of studying the effect of different parameters that influence ice formation such as temperature, liquid water content, droplet diameter and accretion time. The analysis has been conducted on different typical airfoils as well as on NASA/DOE Mod-0 wind turbine. Results showed that ice accretion on wind turbines may reduce the power output by more than 20%.

  1. A Model to Assess the Risk of Ice Accretion Due to Ice Crystal Ingestion in a Turbofan Engine and its Effects on Performance

    NASA Technical Reports Server (NTRS)

    Jorgenson, Philip C. E.; Veres, Joseph P.; Wright, William B.; Struk, Peter M.

    2013-01-01

    The occurrence of ice accretion within commercial high bypass aircraft turbine engines has been reported under certain atmospheric conditions. Engine anomalies have taken place at high altitudes that were attributed to ice crystal ingestion, partially melting, and ice accretion on the compression system components. The result was one or more of the following anomalies: degraded engine performance, engine roll back, compressor surge and stall, and flameout of the combustor. The main focus of this research is the development of a computational tool that can estimate whether there is a risk of ice accretion by tracking key parameters through the compression system blade rows at all engine operating points within the flight trajectory. The tool has an engine system thermodynamic cycle code, coupled with a compressor flow analysis code, and an ice particle melt code that has the capability of determining the rate of sublimation, melting, and evaporation through the compressor blade rows. Assumptions are made to predict the complex physics involved in engine icing. Specifically, the code does not directly estimate ice accretion and does not have models for particle breakup or erosion. Two key parameters have been suggested as conditions that must be met at the same location for ice accretion to occur: the local wet-bulb temperature to be near freezing or below and the local melt ratio must be above 10%. These parameters were deduced from analyzing laboratory icing test data and are the criteria used to predict the possibility of ice accretion within an engine including the specific blade row where it could occur. Once the possibility of accretion is determined from these parameters, the degree of blockage due to ice accretion on the local stator vane can be estimated from an empirical model of ice growth rate and time spent at that operating point in the flight trajectory. The computational tool can be used to assess specific turbine engines to their susceptibility to

  2. Comparison of secondary flows predicted by a viscous code and an inviscid code with experimental data for a turning duct

    NASA Technical Reports Server (NTRS)

    Schwab, J. R.; Povinelli, L. A.

    1984-01-01

    A comparison of the secondary flows computed by the viscous Kreskovsky-Briley-McDonald code and the inviscid Denton code with benchmark experimental data for turning duct is presented. The viscous code is a fully parabolized space-marching Navier-Stokes solver while the inviscid code is a time-marching Euler solver. The experimental data were collected by Taylor, Whitelaw, and Yianneskis with a laser Doppler velocimeter system in a 90 deg turning duct of square cross-section. The agreement between the viscous and inviscid computations was generally very good for the streamwise primary velocity and the radial secondary velocity, except at the walls, where slip conditions were specified for the inviscid code. The agreement between both the computations and the experimental data was not as close, especially at the 60.0 deg and 77.5 deg angular positions within the duct. This disagreement was attributed to incomplete modelling of the vortex development near the suction surface.

  3. Comparison of secondary flows predicted by a viscous code and an inviscid code with experimental data for a turning duct

    NASA Technical Reports Server (NTRS)

    Schwab, J. R.; Povinelli, L. A.

    1983-01-01

    A comparison of the secondary flows computed by the viscous Kreskovsky-Briley-McDonald code and the inviscid Denton code with benchmark experimental data for turning duct is presented. The viscous code is a fully parabolized space-marching Navier-Stokes solver while the inviscid code is a time-marching Euler solver. The experimental data were collected by Taylor, Whitelaw, and Yianneskis with a laser Doppler velocimeter system in a 90 deg turning duct of square cross-section. The agreement between the viscous and inviscid computations was generally very good for the streamwise primary velocity and the radial secondary velocity, except at the walls, where slip conditions were specified for the inviscid code. The agreement between both the computations and the experimental data was not as close, especially at the 60.0 deg and 77.5 deg angular positions within the duct. This disagreement was attributed to incomplete modeling of the vortex development near the suction surface.

  4. Long-range accelerated BOTDA sensor using adaptive linear prediction and cyclic coding.

    PubMed

    Muanenda, Yonas; Taki, Mohammad; Pasquale, Fabrizio Di

    2014-09-15

    We propose and experimentally demonstrate a long-range accelerated Brillouin optical time domain analysis (BOTDA) sensor that exploits the complementary noise reduction benefits of adaptive linear prediction and optical pulse coding. The combined technique allows using orders of magnitude less the number of averages of the backscattered BOTDA traces compared to a standard single pulse BOTDA, enabling distributed strain measurement over 10 km of a standard single mode fiber with meter-scale spatial resolution and 1.8 MHz Brillouin frequency shift resolution. By optimizing the system parameters, the measurement is achieved with only 20 averages for each Brillouin gain spectrum scanned frequency, allowing for an eight times faster strain measurement compared to the use of cyclic pulse coding alone.

  5. Life Prediction for a CMC Component Using the NASALIFE Computer Code

    NASA Technical Reports Server (NTRS)

    Gyekenyesi, John Z.; Murthy, Pappu L. N.; Mital, Subodh K.

    2005-01-01

    The computer code, NASALIFE, was used to provide estimates for life of an SiC/SiC stator vane under varying thermomechanical loading conditions. The primary intention of this effort is to show how the computer code NASALIFE can be used to provide reasonable estimates of life for practical propulsion system components made of advanced ceramic matrix composites (CMC). Simple loading conditions provided readily observable and acceptable life predictions. Varying the loading conditions such that low cycle fatigue and creep were affected independently provided expected trends in the results for life due to varying loads and life due to creep. Analysis was based on idealized empirical data for the 9/99 Melt Infiltrated SiC fiber reinforced SiC.

  6. Predicted effects of sensorineural hearing loss on across-fiber envelope coding in the auditory nervea

    PubMed Central

    Swaminathan, Jayaganesh; Heinz, Michael G.

    2011-01-01

    Cross-channel envelope correlations are hypothesized to influence speech intelligibility, particularly in adverse conditions. Acoustic analyses suggest speech envelope correlations differ for syllabic and phonemic ranges of modulation frequency. The influence of cochlear filtering was examined here by predicting cross-channel envelope correlations in different speech modulation ranges for normal and impaired auditory-nerve (AN) responses. Neural cross-correlation coefficients quantified across-fiber envelope coding in syllabic (0–5 Hz), phonemic (5–64 Hz), and periodicity (64–300 Hz) modulation ranges. Spike trains were generated from a physiologically based AN model. Correlations were also computed using the model with selective hair-cell damage. Neural predictions revealed that envelope cross-correlation decreased with increased characteristic-frequency separation for all modulation ranges (with greater syllabic-envelope correlation than phonemic or periodicity). Syllabic envelope was highly correlated across many spectral channels, whereas phonemic and periodicity envelopes were correlated mainly between adjacent channels. Outer-hair-cell impairment increased the degree of cross-channel correlation for phonemic and periodicity ranges for speech in quiet and in noise, thereby reducing the number of independent neural information channels for envelope coding. In contrast, outer-hair-cell impairment was predicted to decrease cross-channel correlation for syllabic envelopes in noise, which may partially account for the reduced ability of hearing-impaired listeners to segregate speech in complex backgrounds. PMID:21682421

  7. A Predictive Coding Perspective on Beta Oscillations during Sentence-Level Language Comprehension

    PubMed Central

    Lewis, Ashley G.; Schoffelen, Jan-Mathijs; Schriefers, Herbert; Bastiaansen, Marcel

    2016-01-01

    Oscillatory neural dynamics have been steadily receiving more attention as a robust and temporally precise signature of network activity related to language processing. We have recently proposed that oscillatory dynamics in the beta and gamma frequency ranges measured during sentence-level comprehension might be best explained from a predictive coding perspective. Under our proposal we related beta oscillations to both the maintenance/change of the neural network configuration responsible for the construction and representation of sentence-level meaning, and to top–down predictions about upcoming linguistic input based on that sentence-level meaning. Here we zoom in on these particular aspects of our proposal, and discuss both old and new supporting evidence. Finally, we present some preliminary magnetoencephalography data from an experiment comparing Dutch subject- and object-relative clauses that was specifically designed to test our predictive coding framework. Initial results support the first of the two suggested roles for beta oscillations in sentence-level language comprehension. PMID:26973500

  8. Pulsed Accretion onto Eccentric and Circular Binaries

    NASA Astrophysics Data System (ADS)

    Muñoz, Diego J.; Lai, Dong

    2016-08-01

    We present numerical simulations of circumbinary accretion onto eccentric and circular binaries using the moving-mesh code AREPO. This is the first set of simulations to tackle the problem of binary accretion using a finite-volume scheme on a freely moving mesh, which allows for accurate measurements of accretion onto individual stars for arbitrary binary eccentricity. While accretion onto a circular binary shows bursts with period of ˜ 5 times the binary period P b, accretion onto an eccentric binary is predominantly modulated at the period ˜ 1{P}{{b}}. For an equal-mass circular binary, the accretion rates onto individual stars are quite similar to each other, following the same variable pattern in time. By contrast, for eccentric binaries, one of the stars can accrete at a rate 10-20 times larger than its companion. This “symmetry breaking” between the stars, however, alternates over timescales of order 200P b and can be attributed to a slowly precessing, eccentric circumbinary disk. Over longer timescales, the net accretion rates onto individual stars are the same, reaching a quasi-steady state with the circumbinary disk. These results have important implications for the accretion behavior of binary T Tauri stars and supermassive binary black holes.

  9. Modified linear predictive coding approach for moving target tracking by Doppler radar

    NASA Astrophysics Data System (ADS)

    Ding, Yipeng; Lin, Xiaoyi; Sun, Ke-Hui; Xu, Xue-Mei; Liu, Xi-Yao

    2016-07-01

    Doppler radar is a cost-effective tool for moving target tracking, which can support a large range of civilian and military applications. A modified linear predictive coding (LPC) approach is proposed to increase the target localization accuracy of the Doppler radar. Based on the time-frequency analysis of the received echo, the proposed approach first real-time estimates the noise statistical parameters and constructs an adaptive filter to intelligently suppress the noise interference. Then, a linear predictive model is applied to extend the available data, which can help improve the resolution of the target localization result. Compared with the traditional LPC method, which empirically decides the extension data length, the proposed approach develops an error array to evaluate the prediction accuracy and thus, adjust the optimum extension data length intelligently. Finally, the prediction error array is superimposed with the predictor output to correct the prediction error. A series of experiments are conducted to illustrate the validity and performance of the proposed techniques.

  10. Fast Prediction of HCCI Combustion with an Artificial Neural Network Linked to a Fluid Mechanics Code

    SciTech Connect

    Aceves, S M; Flowers, D L; Chen, J; Babaimopoulos, A

    2006-08-29

    We have developed an artificial neural network (ANN) based combustion model and have integrated it into a fluid mechanics code (KIVA3V) to produce a new analysis tool (titled KIVA3V-ANN) that can yield accurate HCCI predictions at very low computational cost. The neural network predicts ignition delay as a function of operating parameters (temperature, pressure, equivalence ratio and residual gas fraction). KIVA3V-ANN keeps track of the time history of the ignition delay during the engine cycle to evaluate the ignition integral and predict ignition for each computational cell. After a cell ignites, chemistry becomes active, and a two-step chemical kinetic mechanism predicts composition and heat generation in the ignited cells. KIVA3V-ANN has been validated by comparison with isooctane HCCI experiments in two different engines. The neural network provides reasonable predictions for HCCI combustion and emissions that, although typically not as good as obtained with the more physically representative multi-zone model, are obtained at a much reduced computational cost. KIVA3V-ANN can perform reasonably accurate HCCI calculations while requiring only 10% more computational effort than a motored KIVA3V run. It is therefore considered a valuable tool for evaluation of engine maps or other performance analysis tasks requiring multiple individual runs.

  11. Vector Sum Excited Linear Prediction (VSELP) speech coding at 4.8 kbps

    NASA Technical Reports Server (NTRS)

    Gerson, Ira A.; Jasiuk, Mark A.

    1990-01-01

    Code Excited Linear Prediction (CELP) speech coders exhibit good performance at data rates as low as 4800 bps. The major drawback to CELP type coders is their larger computational requirements. The Vector Sum Excited Linear Prediction (VSELP) speech coder utilizes a codebook with a structure which allows for a very efficient search procedure. Other advantages of the VSELP codebook structure is discussed and a detailed description of a 4.8 kbps VSELP coder is given. This coder is an improved version of the VSELP algorithm, which finished first in the NSA's evaluation of the 4.8 kbps speech coders. The coder uses a subsample resolution single tap long term predictor, a single VSELP excitation codebook, a novel gain quantizer which is robust to channel errors, and a new adaptive pre/postfilter arrangement.

  12. CCFL in hot legs and steam generators and its prediction with the CATHARE code

    SciTech Connect

    Geffraye, G.; Bazin, P.; Pichon, P.

    1995-09-01

    This paper presents a study about the Counter-Current Flow Limitation (CCFL) prediction in hot legs and steam generators (SG) in both system test facilities and pressurized water reactors. Experimental data are analyzed, particularly the recent MHYRESA test data. Geometrical and scale effects on the flooding behavior are shown. The CATHARE code modelling problems concerning the CCFL prediction are discussed. A method which gives the user the possibility of controlling the flooding limit at a given location is developed. In order to minimize the user effect, a methodology is proposed to the user in case of a calculation with a counter-current flow between the upper plenum and the SF U-tubes. The following questions have to be made clear for the user: when to use the CATHARE CCFL option, which correlation to use, and where to locate the flooding limit.

  13. Improved inter-layer prediction for light field content coding with display scalability

    NASA Astrophysics Data System (ADS)

    Conti, Caroline; Ducla Soares, Luís.; Nunes, Paulo

    2016-09-01

    Light field imaging based on microlens arrays - also known as plenoptic, holoscopic and integral imaging - has recently risen up as feasible and prospective technology due to its ability to support functionalities not straightforwardly available in conventional imaging systems, such as: post-production refocusing and depth of field changing. However, to gradually reach the consumer market and to provide interoperability with current 2D and 3D representations, a display scalable coding solution is essential. In this context, this paper proposes an improved display scalable light field codec comprising a three-layer hierarchical coding architecture (previously proposed by the authors) that provides interoperability with 2D (Base Layer) and 3D stereo and multiview (First Layer) representations, while the Second Layer supports the complete light field content. For further improving the compression performance, novel exemplar-based inter-layer coding tools are proposed here for the Second Layer, namely: (i) an inter-layer reference picture construction relying on an exemplar-based optimization algorithm for texture synthesis, and (ii) a direct prediction mode based on exemplar texture samples from lower layers. Experimental results show that the proposed solution performs better than the tested benchmark solutions, including the authors' previous scalable codec.

  14. IN-MACA-MCC: Integrated Multiple Attractor Cellular Automata with Modified Clonal Classifier for Human Protein Coding and Promoter Prediction.

    PubMed

    Pokkuluri, Kiran Sree; Inampudi, Ramesh Babu; Nedunuri, S S S N Usha Devi

    2014-01-01

    Protein coding and promoter region predictions are very important challenges of bioinformatics (Attwood and Teresa, 2000). The identification of these regions plays a crucial role in understanding the genes. Many novel computational and mathematical methods are introduced as well as existing methods that are getting refined for predicting both of the regions separately; still there is a scope for improvement. We propose a classifier that is built with MACA (multiple attractor cellular automata) and MCC (modified clonal classifier) to predict both regions with a single classifier. The proposed classifier is trained and tested with Fickett and Tung (1992) datasets for protein coding region prediction for DNA sequences of lengths 54, 108, and 162. This classifier is trained and tested with MMCRI datasets for protein coding region prediction for DNA sequences of lengths 252 and 354. The proposed classifier is trained and tested with promoter sequences from DBTSS (Yamashita et al., 2006) dataset and nonpromoters from EID (Saxonov et al., 2000) and UTRdb (Pesole et al., 2002) datasets. The proposed model can predict both regions with an average accuracy of 90.5% for promoter and 89.6% for protein coding region predictions. The specificity and sensitivity values of promoter and protein coding region predictions are 0.89 and 0.92, respectively.

  15. Neural evidence for predictive coding in auditory cortex during speech production.

    PubMed

    Okada, Kayoko; Matchin, William; Hickok, Gregory

    2017-04-10

    Recent models of speech production suggest that motor commands generate forward predictions of the auditory consequences of those commands, that these forward predications can be used to monitor and correct speech output, and that this system is hierarchically organized (Hickok, Houde, & Rong, Neuron, 69(3), 407--422, 2011; Pickering & Garrod, Behavior and Brain Sciences, 36(4), 329--347, 2013). Recent psycholinguistic research has shown that internally generated speech (i.e., imagined speech) produces different types of errors than does overt speech (Oppenheim & Dell, Cognition, 106(1), 528--537, 2008; Oppenheim & Dell, Memory & Cognition, 38(8), 1147-1160, 2010). These studies suggest that articulated speech might involve predictive coding at additional levels than imagined speech. The current fMRI experiment investigates neural evidence of predictive coding in speech production. Twenty-four participants from UC Irvine were recruited for the study. Participants were scanned while they were visually presented with a sequence of words that they reproduced in sync with a visual metronome. On each trial, they were cued to either silently articulate the sequence or to imagine the sequence without overt articulation. As expected, silent articulation and imagined speech both engaged a left hemisphere network previously implicated in speech production. A contrast of silent articulation with imagined speech revealed greater activation for articulated speech in inferior frontal cortex, premotor cortex and the insula in the left hemisphere, consistent with greater articulatory load. Although both conditions were silent, this contrast also produced significantly greater activation in auditory cortex in dorsal superior temporal gyrus in both hemispheres. We suggest that these activations reflect forward predictions arising from additional levels of the perceptual/motor hierarchy that are involved in monitoring the intended speech output.

  16. Structured Set Intra Prediction With Discriminative Learning in a Max-Margin Markov Network for High Efficiency Video Coding

    PubMed Central

    Dai, Wenrui; Xiong, Hongkai; Jiang, Xiaoqian; Chen, Chang Wen

    2014-01-01

    This paper proposes a novel model on intra coding for High Efficiency Video Coding (HEVC), which simultaneously predicts blocks of pixels with optimal rate distortion. It utilizes the spatial statistical correlation for the optimal prediction based on 2-D contexts, in addition to formulating the data-driven structural interdependences to make the prediction error coherent with the probability distribution, which is desirable for successful transform and coding. The structured set prediction model incorporates a max-margin Markov network (M3N) to regulate and optimize multiple block predictions. The model parameters are learned by discriminating the actual pixel value from other possible estimates to maximize the margin (i.e., decision boundary bandwidth). Compared to existing methods that focus on minimizing prediction error, the M3N-based model adaptively maintains the coherence for a set of predictions. Specifically, the proposed model concurrently optimizes a set of predictions by associating the loss for individual blocks to the joint distribution of succeeding discrete cosine transform coefficients. When the sample size grows, the prediction error is asymptotically upper bounded by the training error under the decomposable loss function. As an internal step, we optimize the underlying Markov network structure to find states that achieve the maximal energy using expectation propagation. For validation, we integrate the proposed model into HEVC for optimal mode selection on rate-distortion optimization. The proposed prediction model obtains up to 2.85% bit rate reduction and achieves better visual quality in comparison to the HEVC intra coding. PMID:25505829

  17. Predictive coding in autism spectrum disorder and attention deficit hyperactivity disorder

    PubMed Central

    Gonzalez-Gadea, Maria Luz; Chennu, Srivas; Bekinschtein, Tristan A.; Rattazzi, Alexia; Beraudi, Ana; Tripicchio, Paula; Moyano, Beatriz; Soffita, Yamila; Steinberg, Laura; Adolfi, Federico; Sigman, Mariano; Marino, Julian; Manes, Facundo

    2015-01-01

    Predictive coding has been proposed as a framework to understand neural processes in neuropsychiatric disorders. We used this approach to describe mechanisms responsible for attentional abnormalities in autism spectrum disorder (ASD) and attention deficit hyperactivity disorder (ADHD). We monitored brain dynamics of 59 children (8–15 yr old) who had ASD or ADHD or who were control participants via high-density electroencephalography. We performed analysis at the scalp and source-space levels while participants listened to standard and deviant tone sequences. Through task instructions, we manipulated top-down expectation by presenting expected and unexpected deviant sequences. Children with ASD showed reduced superior frontal cortex (FC) responses to unexpected events but increased dorsolateral prefrontal cortex (PFC) activation to expected events. In contrast, children with ADHD exhibited reduced cortical responses in superior FC to expected events but strong PFC activation to unexpected events. Moreover, neural abnormalities were associated with specific control mechanisms, namely, inhibitory control in ASD and set-shifting in ADHD. Based on the predictive coding account, top-down expectation abnormalities could be attributed to a disproportionate reliance (precision) allocated to prior beliefs in ASD and to sensory input in ADHD. PMID:26311184

  18. Predictive coding in autism spectrum disorder and attention deficit hyperactivity disorder.

    PubMed

    Gonzalez-Gadea, Maria Luz; Chennu, Srivas; Bekinschtein, Tristan A; Rattazzi, Alexia; Beraudi, Ana; Tripicchio, Paula; Moyano, Beatriz; Soffita, Yamila; Steinberg, Laura; Adolfi, Federico; Sigman, Mariano; Marino, Julian; Manes, Facundo; Ibanez, Agustin

    2015-11-01

    Predictive coding has been proposed as a framework to understand neural processes in neuropsychiatric disorders. We used this approach to describe mechanisms responsible for attentional abnormalities in autism spectrum disorder (ASD) and attention deficit hyperactivity disorder (ADHD). We monitored brain dynamics of 59 children (8-15 yr old) who had ASD or ADHD or who were control participants via high-density electroencephalography. We performed analysis at the scalp and source-space levels while participants listened to standard and deviant tone sequences. Through task instructions, we manipulated top-down expectation by presenting expected and unexpected deviant sequences. Children with ASD showed reduced superior frontal cortex (FC) responses to unexpected events but increased dorsolateral prefrontal cortex (PFC) activation to expected events. In contrast, children with ADHD exhibited reduced cortical responses in superior FC to expected events but strong PFC activation to unexpected events. Moreover, neural abnormalities were associated with specific control mechanisms, namely, inhibitory control in ASD and set-shifting in ADHD. Based on the predictive coding account, top-down expectation abnormalities could be attributed to a disproportionate reliance (precision) allocated to prior beliefs in ASD and to sensory input in ADHD.

  19. Deterministic multi-zone ice accretion modeling

    NASA Technical Reports Server (NTRS)

    Yamaguchi, K.; Hansman, R. John, Jr.; Kazmierczak, Michael

    1991-01-01

    The focus here is on a deterministic model of the surface roughness transition behavior of glaze ice. The initial smooth/rough transition location, bead formation, and the propagation of the transition location are analyzed. Based on the hypothesis that the smooth/rough transition location coincides with the laminar/turbulent boundary layer transition location, a multizone model is implemented in the LEWICE code. In order to verify the effectiveness of the model, ice accretion predictions for simple cylinders calculated by the multizone LEWICE are compared to experimental ice shapes. The glaze ice shapes are found to be sensitive to the laminar surface roughness and bead thickness parameters controlling the transition location, while the ice shapes are found to be insensitive to the turbulent surface roughness.

  20. Computer code to predict the heat of explosion of high energy materials.

    PubMed

    Muthurajan, H; Sivabalan, R; Pon Saravanan, N; Talawar, M B

    2009-01-30

    The computational approach to the thermochemical changes involved in the process of explosion of a high energy materials (HEMs) vis-à-vis its molecular structure aids a HEMs chemist/engineers to predict the important thermodynamic parameters such as heat of explosion of the HEMs. Such a computer-aided design will be useful in predicting the performance of a given HEM as well as in conceiving futuristic high energy molecules that have significant potential in the field of explosives and propellants. The software code viz., LOTUSES developed by authors predicts various characteristics of HEMs such as explosion products including balanced explosion reactions, density of HEMs, velocity of detonation, CJ pressure, etc. The new computational approach described in this paper allows the prediction of heat of explosion (DeltaH(e)) without any experimental data for different HEMs, which are comparable with experimental results reported in literature. The new algorithm which does not require any complex input parameter is incorporated in LOTUSES (version 1.5) and the results are presented in this paper. The linear regression analysis of all data point yields the correlation coefficient R(2)=0.9721 with a linear equation y=0.9262x+101.45. The correlation coefficient value 0.9721 reveals that the computed values are in good agreement with experimental values and useful for rapid hazard assessment of energetic materials.

  1. Affinity regression predicts the recognition code of nucleic acid binding proteins

    PubMed Central

    Pelossof, Raphael; Singh, Irtisha; Yang, Julie L.; Weirauch, Matthew T.; Hughes, Timothy R.; Leslie, Christina S.

    2016-01-01

    Predicting the affinity profiles of nucleic acid-binding proteins directly from the protein sequence is a major unsolved problem. We present a statistical approach for learning the recognition code of a family of transcription factors (TFs) or RNA-binding proteins (RBPs) from high-throughput binding assays. Our method, called affinity regression, trains on protein binding microarray (PBM) or RNA compete experiments to learn an interaction model between proteins and nucleic acids, using only protein domain and probe sequences as inputs. By training on mouse homeodomain PBM profiles, our model correctly identifies residues that confer DNA-binding specificity and accurately predicts binding motifs for an independent set of divergent homeodomains. Similarly, learning from RNA compete profiles for diverse RBPs, our model can predict the binding affinities of held-out proteins and identify key RNA-binding residues. More broadly, we envision applying our method to model and predict biological interactions in any setting where there is a high-throughput ‘affinity’ readout. PMID:26571099

  2. Gas dynamics for accretion disk simulations

    NASA Technical Reports Server (NTRS)

    Whitehurst, R.

    1994-01-01

    The behavior of accretion disks can largely be understood in terms of the basic physical processes of mass, energy, and momentum conservation. Despite this, detailed modeling of these systems using modern computational techniques is challenging and controversial. Disturbing differences exist between methods used widely in astrophysics, namely Eulerian finite-difference techniques and particle codes such as SPH. Therefore neither technique is fully satisfactory for accretion disk simulations. This paper describes a new fully Lagrangian method designed to resolve these difficulties.

  3. Planetesimal Accretion in Binary Star Systems

    NASA Astrophysics Data System (ADS)

    Marzari, F.; Scholl, H.

    2000-11-01

    Planetesimal accretion in close binary systems is a complex process for the gravitational perturbations of the companion star on the planetesimal orbits. These perturbations excite high eccentricities that can halt the accumulation process of planetesimals into planets also in those regions around the star where stable planetary orbits would eventually be possible. However, the evolution of a planetesimal swarm is also affected by collisions and gas drag. In particular, gas drag combined with the secular perturbations of the secondary star forces a strong alignment of all the planetesimal periastra. Since periastra are also coupled to eccentricities via the secular perturbations of the companion, the orbits of the planetesimals, besides all being aligned, also have very close values of eccentricity. This orbital ``phasing'' strongly reduces the contribution of the eccentricity to the relative velocities between planetesimals, and the impact speeds are dominated by the Keplerian shear: accretion becomes possible. This behavior is not limited to small planetesimals but also affects bodies as large as 100 km in diameter. The effects of gas drag are in fact enhanced by the presence of the constant forced component in the orbital eccentricity of the planetesimals. We describe analytically the periastron alignment by using the secular equations developed by Heppenheimer, and we test the prediction of the theory with a numerical code that integrates the orbits of a swarm of planetesimals perturbed by gas drag and collisions. The gas density is assumed to decrease outward, and the collisions are modeled as inelastic. Our computations are focused on the α Centauri system, which is a good candidate for terrestrial planets as we will show. The impact velocities between planetesimals of different sizes are computed at progressively increasing distances from the primary star and are compared with estimates for the maximum velocity for accretion. According to our simulations in

  4. Accretion Processes in Astrophysics

    NASA Astrophysics Data System (ADS)

    González Martínez-País, Ignacio; Shahbaz, Tariq; Casares Velázquez, Jorge

    2014-03-01

    List of contributors; List of participants; Preface; Acknowledgments; Abbreviations; 1. Accretion disks Henk Spruit; 2. The evolution of binary systems Philipp Podsiadlowski; 3. Accretion onto white dwarfs Brian Warner; 4. Accretion in X-ray binary systems Robert I. Hynes; 5. X-ray binary populations in galaxies Giuseppina Fabbiano; 6. Observational characteristics of accretion onto black holes I Chris Done; 7. Observational characteristics of accretion onto black holes II Rob Fender; 8. Computing black hole accretion John F. Hawley; Appendix: Piazzi Smyth, the Cape of Good Hope, Tenerife and the siting of large telescopes Brian Warner.

  5. Rhythmic complexity and predictive coding: a novel approach to modeling rhythm and meter perception in music.

    PubMed

    Vuust, Peter; Witek, Maria A G

    2014-01-01

    Musical rhythm, consisting of apparently abstract intervals of accented temporal events, has a remarkable capacity to move our minds and bodies. How does the cognitive system enable our experiences of rhythmically complex music? In this paper, we describe some common forms of rhythmic complexity in music and propose the theory of predictive coding (PC) as a framework for understanding how rhythm and rhythmic complexity are processed in the brain. We also consider why we feel so compelled by rhythmic tension in music. First, we consider theories of rhythm and meter perception, which provide hierarchical and computational approaches to modeling. Second, we present the theory of PC, which posits a hierarchical organization of brain responses reflecting fundamental, survival-related mechanisms associated with predicting future events. According to this theory, perception and learning is manifested through the brain's Bayesian minimization of the error between the input to the brain and the brain's prior expectations. Third, we develop a PC model of musical rhythm, in which rhythm perception is conceptualized as an interaction between what is heard ("rhythm") and the brain's anticipatory structuring of music ("meter"). Finally, we review empirical studies of the neural and behavioral effects of syncopation, polyrhythm and groove, and propose how these studies can be seen as special cases of the PC theory. We argue that musical rhythm exploits the brain's general principles of prediction and propose that pleasure and desire for sensorimotor synchronization from musical rhythm may be a result of such mechanisms.

  6. Brain responses to regular and octave-scrambled melodies: A case of predictive-coding?

    PubMed

    Globerson, Eitan; Granot, Roni; Tal, Idan; Harpaz, Yuval; Zeev-Wolf, Maor; Golstein, Abraham

    2017-03-01

    Melody recognition is an online process of evaluating incoming information and comparing this information to an existing internal corpus, thereby reducing prediction error. The predictive-coding model postulates top-down control on sensory processing accompanying reduction in prediction error. To investigate the relevancy of this model to melody processing, the current study examined early magnetoencephalogram (MEG) auditory responses to familiar and unfamiliar melodies in 25 participants. The familiar melodies followed and primed an octave-scrambled version of the same melody. The retrograde version of theses melodies served as the unfamiliar control condition. Octave-transposed melodies were included to examine the influence of pitch representation (pitch-height/pitch-chroma representation) on brain responses to melody recognition. Results demonstrate a reduction of the M100 auditory response to familiar, as compared with unfamiliar, melodies regardless of their form of presentation (condensed vs. octave-scrambled). This trend appeared to begin after the third tone of the melody. An additional behavioral study with the same melody corpus showed a similar trend-namely, a significant difference between familiarity rating for familiar and unfamiliar melodies, beginning with the third tone of the melody. These results may indicate a top-down inhibition of early auditory responses to melodies that is influenced by pitch representation. (PsycINFO Database Record

  7. A 3D-CFD code for accurate prediction of fluid flows and fluid forces in seals

    NASA Technical Reports Server (NTRS)

    Athavale, M. M.; Przekwas, A. J.; Hendricks, R. C.

    1994-01-01

    Current and future turbomachinery requires advanced seal configurations to control leakage, inhibit mixing of incompatible fluids and to control the rotodynamic response. In recognition of a deficiency in the existing predictive methodology for seals, a seven year effort was established in 1990 by NASA's Office of Aeronautics Exploration and Technology, under the Earth-to-Orbit Propulsion program, to develop validated Computational Fluid Dynamics (CFD) concepts, codes and analyses for seals. The effort will provide NASA and the U.S. Aerospace Industry with advanced CFD scientific codes and industrial codes for analyzing and designing turbomachinery seals. An advanced 3D CFD cylindrical seal code has been developed, incorporating state-of-the-art computational methodology for flow analysis in straight, tapered and stepped seals. Relevant computational features of the code include: stationary/rotating coordinates, cylindrical and general Body Fitted Coordinates (BFC) systems, high order differencing schemes, colocated variable arrangement, advanced turbulence models, incompressible/compressible flows, and moving grids. This paper presents the current status of code development, code demonstration for predicting rotordynamic coefficients, numerical parametric study of entrance loss coefficients for generic annular seals, and plans for code extensions to labyrinth, damping, and other seal configurations.

  8. Circulating long non-coding RNAs NRON and MHRT as novel predictive biomarkers of heart failure.

    PubMed

    Xuan, Lina; Sun, Lihua; Zhang, Ying; Huang, Yuechao; Hou, Yan; Li, Qingqi; Guo, Ying; Feng, Bingbing; Cui, Lina; Wang, Xiaoxue; Wang, Zhiguo; Tian, Ye; Yu, Bo; Wang, Shu; Xu, Chaoqian; Zhang, Mingyu; Du, Zhimin; Lu, Yanjie; Yang, Bao Feng

    2017-03-14

    This study sought to evaluate the potential of circulating long non-coding RNAs (lncRNAs) as biomarkers for heart failure (HF). We measured the circulating levels of 13 individual lncRNAs which are known to be relevant to cardiovascular disease in the plasma samples from 72 HF patients and 60 non-HF control participants using real-time reverse transcription-polymerase chain reaction (real-time RT-PCR) methods. We found that out of the 13 lncRNAs tested, non-coding repressor of NFAT (NRON) and myosin heavy-chain-associated RNA transcripts (MHRT) had significantly higher plasma levels in HF than in non-HF subjects: 3.17 ± 0.30 versus 1.0 ± 0.07 for NRON (P < 0.0001) and 1.66 ± 0.14 versus 1.0 ± 0.12 for MHRT (P < 0.0001). The area under the ROC curve was 0.865 for NRON and 0.702 for MHRT. Univariate and multivariate analyses identified NRON and MHRT as independent predictors for HF. Spearman's rank correlation analysis showed that NRON was negatively correlated with HDL and positively correlated with LDH, whereas MHRT was positively correlated with AST and LDH. Hence, elevation of circulating NRON and MHRT predicts HF and may be considered as novel biomarkers of HF.

  9. A computer code (SKINTEMP) for predicting transient missile and aircraft heat transfer characteristics

    NASA Astrophysics Data System (ADS)

    Cummings, Mary L.

    1994-09-01

    A FORTRAN computer code (SKINTEMP) has been developed to calculate transient missile/aircraft aerodynamic heating parameters utilizing basic flight parameters such as altitude, Mach number, and angle of attack. The insulated skin temperature of a vehicle surface on either the fuselage (axisymmetric body) or wing (two-dimensional body) is computed from a basic heat balance relationship throughout the entire spectrum (subsonic, transonic, supersonic, hypersonic) of flight. This calculation method employs a simple finite difference procedure which considers radiation, forced convection, and non-reactive chemistry. Surface pressure estimates are based on a modified Newtonian flow model. Eckert's reference temperature method is used as the forced convection heat transfer model. SKINTEMP predictions are compared with a limited number of test cases. SKINTEMP was developed as a tool to enhance the conceptual design process of high speed missiles and aircraft. Recommendations are made for possible future development of SKINTEMP to further support the design process.

  10. Prediction of explosive cylinder tests using equations of state from the PANDA code

    SciTech Connect

    Kerley, G.I.; Christian-Frear, T.L.

    1993-09-28

    The PANDA code is used to construct tabular equations of state (EOS) for the detonation products of 24 explosives having CHNO compositions. These EOS, together with a reactive burn model, are used in numerical hydrocode calculations of cylinder tests. The predicted detonation properties and cylinder wall velocities are found to give very good agreement with experimental data. Calculations of flat plate acceleration tests for the HMX-based explosive LX14 are also made and shown to agree well with the measurements. The effects of the reaction zone on both the cylinder and flat plate tests are discussed. For TATB-based explosives, the differences between experiment and theory are consistently larger than for other compositions and may be due to nonideal (finite dimameter) behavior.

  11. Contribution to the Prediction of the Fold Code: Application to Immunoglobulin and Flavodoxin Cases

    PubMed Central

    Banach, Mateusz; Prudhomme, Nicolas; Carpentier, Mathilde; Duprat, Elodie; Papandreou, Nikolaos; Kalinowska, Barbara; Chomilier, Jacques; Roterman, Irena

    2015-01-01

    Background Folding nucleus of globular proteins formation starts by the mutual interaction of a group of hydrophobic amino acids whose close contacts allow subsequent formation and stability of the 3D structure. These early steps can be predicted by simulation of the folding process through a Monte Carlo (MC) coarse grain model in a discrete space. We previously defined MIRs (Most Interacting Residues), as the set of residues presenting a large number of non-covalent neighbour interactions during such simulation. MIRs are good candidates to define the minimal number of residues giving rise to a given fold instead of another one, although their proportion is rather high, typically [15-20]% of the sequences. Having in mind experiments with two sequences of very high levels of sequence identity (up to 90%) but different folds, we combined the MIR method, which takes sequence as single input, with the “fuzzy oil drop” (FOD) model that requires a 3D structure, in order to estimate the residues coding for the fold. FOD assumes that a globular protein follows an idealised 3D Gaussian distribution of hydrophobicity density, with the maximum in the centre and minima at the surface of the “drop”. If the actual local density of hydrophobicity around a given amino acid is as high as the ideal one, then this amino acid is assigned to the core of the globular protein, and it is assumed to follow the FOD model. Therefore one obtains a distribution of the amino acids of a protein according to their agreement or rejection with the FOD model. Results We compared and combined MIR and FOD methods to define the minimal nucleus, or keystone, of two populated folds: immunoglobulin-like (Ig) and flavodoxins (Flav). The combination of these two approaches defines some positions both predicted as a MIR and assigned as accordant with the FOD model. It is shown here that for these two folds, the intersection of the predicted sets of residues significantly differs from random selection

  12. On the efficiency of image completion methods for intra prediction in video coding with large block structures

    NASA Astrophysics Data System (ADS)

    Doshkov, Dimitar; Jottrand, Oscar; Wiegand, Thomas; Ndjiki-Nya, Patrick

    2013-02-01

    Intra prediction is a fundamental tool in video coding with hybrid block-based architecture. Recent investigations have shown that one of the most beneficial elements for a higher compression performance in high-resolution videos is the incorporation of larger block structures. Thus in this work, we investigate the performance of novel intra prediction modes based on different image completion techniques in a new video coding scheme with large block structures. Image completion methods exploit the fact that high frequency image regions yield high coding costs when using classical H.264/AVC prediction modes. This problem is tackled by investigating the incorporation of several intra predictors using the concept of Laplace partial differential equation (PDE), Least Square (LS) based linear prediction and the Auto Regressive model. A major aspect of this article is the evaluation of the coding performance in a qualitative (i.e. coding efficiency) manner. Experimental results show significant improvements in compression (up to 7.41 %) by integrating the LS-based linear intra prediction.

  13. The WISGSK: A computer code for the prediction of a multistage axial compressor performance with water ingestion

    NASA Technical Reports Server (NTRS)

    Tsuchiya, T.; Murthy, S. N. B.

    1982-01-01

    A computer code is presented for the prediction of off-design axial flow compressor performance with water ingestion. Four processes were considered to account for the aero-thermo-mechanical interactions during operation with air-water droplet mixture flow: (1) blade performance change, (2) centrifuging of water droplets, (3) heat and mass transfer process between the gaseous and the liquid phases and (4) droplet size redistribution due to break-up. Stage and compressor performance are obtained by a stage stacking procedure using representative veocity diagrams at a rotor inlet and outlet mean radii. The Code has options for performance estimation with (1) mixtures of gas and (2) gas-water droplet mixtures, and therefore can take into account the humidity present in ambient conditions. A test case illustrates the method of using the Code. The Code follows closely the methodology and architecture of the NASA-STGSTK Code for the estimation of axial-flow compressor performance with air flow.

  14. Potential prognostic long non-coding RNA identification and their validation in predicting survival of patients with multiple myeloma.

    PubMed

    Hu, Ai-Xin; Huang, Zhi-Yong; Zhang, Lin; Shen, Jian

    2017-04-01

    Multiple myeloma, a typical hematological malignancy, is characterized by malignant proliferation of plasma cells. This study was to identify differently expressed long non-coding RNAs to predict the survival of patients with multiple myeloma efficiently. Gene expressing profiles of diagnosed patients with multiple myeloma, GSE24080 (559 samples) and GSE57317 (55 samples), were downloaded from Gene Expression Omnibus database. After processing, survival-related long non-coding RNAs were identified by Cox regression analysis. The prognosis of multiple myeloma patients with differently expressed long non-coding RNAs was predicted by Kaplan-Meier analysis. Meanwhile, stratified analysis was performed based on the concentrations of serum beta 2-microglobulin (S-beta 2m), albumin, and lactate dehydrogenase of multiple myeloma patients. Gene set enrichment analysis was performed to further explore the functions of identified long non-coding RNAs. A total of 176 long non-coding RNAs significantly related to the survival of multiple myeloma patients (p < 0.05) were identified. In dataset GSE24080 and GSE57317, there were 558 and 55 patients being clustered into two groups with significant differences, respectively. Stratified analysis indicated that prediction of the prognoses with these long non-coding RNAs was independent from other clinical phenotype of multiple myeloma. Gene set enrichment analysis-identified pathways of cell cycle, focal adhesion, and G2-M checkpoint were associated with these long non-coding RNAs. A total of 176 long non-coding RNAs, especially RP1-286D6.1, AC008875.2, MTMR9L, AC069360.2, and AL512791.1, were potential biomarkers to evaluate the prognosis of multiple myeloma patients. These long non-coding RNAs participated indispensably in many pathways associated to the development of multiple myeloma; however, the molecular mechanisms need to be further studied.

  15. Near-fault earthquake ground motion prediction by a high-performance spectral element numerical code

    NASA Astrophysics Data System (ADS)

    Paolucci, Roberto; Stupazzini, Marco

    2008-07-01

    Near-fault effects have been widely recognised to produce specific features of earthquake ground motion, that cannot be reliably predicted by 1D seismic wave propagation modelling, used as a standard in engineering applications. These features may have a relevant impact on the structural response, especially in the nonlinear range, that is hard to predict and to be put in a design format, due to the scarcity of significant earthquake records and of reliable numerical simulations. In this contribution a pilot study is presented for the evaluation of seismic ground-motions in the near-fault region, based on a high-performance numerical code for 3D seismic wave propagation analyses, including the seismic fault, the wave propagation path and the near-surface geological or topographical irregularity. For this purpose, the software package GeoELSE is adopted, based on the spectral element method. The set-up of the numerical benchmark of 3D ground motion simulation in the valley of Grenoble (French Alps) is chosen to study the effect of the complex interaction between basin geometry and radiation mechanism on the variability of earthquake ground motion.

  16. From structure prediction to genomic screens for novel non-coding RNAs.

    PubMed

    Gorodkin, Jan; Hofacker, Ivo L

    2011-08-01

    Non-coding RNAs (ncRNAs) are receiving more and more attention not only as an abundant class of genes, but also as regulatory structural elements (some located in mRNAs). A key feature of RNA function is its structure. Computational methods were developed early for folding and prediction of RNA structure with the aim of assisting in functional analysis. With the discovery of more and more ncRNAs, it has become clear that a large fraction of these are highly structured. Interestingly, a large part of the structure is comprised of regular Watson-Crick and GU wobble base pairs. This and the increased amount of available genomes have made it possible to employ structure-based methods for genomic screens. The field has moved from folding prediction of single sequences to computational screens for ncRNAs in genomic sequence using the RNA structure as the main characteristic feature. Whereas early methods focused on energy-directed folding of single sequences, comparative analysis based on structure preserving changes of base pairs has been efficient in improving accuracy, and today this constitutes a key component in genomic screens. Here, we cover the basic principles of RNA folding and touch upon some of the concepts in current methods that have been applied in genomic screens for de novo RNA structures in searches for novel ncRNA genes and regulatory RNA structure on mRNAs. We discuss the strengths and weaknesses of the different strategies and how they can complement each other.

  17. Near-fault earthquake ground motion prediction by a high-performance spectral element numerical code

    SciTech Connect

    Paolucci, Roberto; Stupazzini, Marco

    2008-07-08

    Near-fault effects have been widely recognised to produce specific features of earthquake ground motion, that cannot be reliably predicted by 1D seismic wave propagation modelling, used as a standard in engineering applications. These features may have a relevant impact on the structural response, especially in the nonlinear range, that is hard to predict and to be put in a design format, due to the scarcity of significant earthquake records and of reliable numerical simulations. In this contribution a pilot study is presented for the evaluation of seismic ground-motions in the near-fault region, based on a high-performance numerical code for 3D seismic wave propagation analyses, including the seismic fault, the wave propagation path and the near-surface geological or topographical irregularity. For this purpose, the software package GeoELSE is adopted, based on the spectral element method. The set-up of the numerical benchmark of 3D ground motion simulation in the valley of Grenoble (French Alps) is chosen to study the effect of the complex interaction between basin geometry and radiation mechanism on the variability of earthquake ground motion.

  18. Performance of a municipal solid waste (MSW) incinerator predicted with a computational fluid dynamics (CFD) code

    SciTech Connect

    Anglesio, P.; Negreanu, G.P.

    1998-07-01

    The purpose of this paper is to investigate by the means of numerical simulation the performance of the MSW incinerator with of Vercelli (Italy). FLUENT, a finite-volumes commercial code for Fluid Dynamics has been used to predict the 3-D reacting flows (gaseous phase) within the incinerator geometry, in order to estimate if the three conditions settled by the Italian law (P.D. 915 / 82) are respected: (a) Flue gas temperature at the input of the secondary combustion chamber must exceed 950 C. (b) Oxygen concentration in the same section must exceed 6 %. (c) Residence time for the flue gas in the secondary combustion chamber must exceed 2 seconds. The model of the incinerator has been created using the software pre-processing facilities (wall, input, outlet and live cells), together with the set-up of boundary conditions. There are also imposed the combustion constants (stoichiometry, heat of combustion, air excess). The solving procedure transforms at the level of each live cell the partial derivative equations in algebraic equations, computing the velocities field, the temperatures, gases concentration, etc. These predicted values were compared with the design properties, and the conclusion was that the conditions (a), (b), (c), are respected in normal operation. The powerful graphic interface helps the user to visualize the magnitude of the computed parameters. These results may be successfully used for the design and operation improvements for MSW incinerators. This fact will substantially increase the efficiency, reduce pollutant emissions and optimize the plant overall performance.

  19. Analytic solution to verify code predictions of two-phase flow in a boiling water reactor core channel

    SciTech Connect

    Chen, K.F.; Olson, C.A.

    1983-09-01

    One reliable method that can be used to verify the solution scheme of a computer code is to compare the code prediction to a simplified problem for which an analytic solution can be derived. An analytic solution for the axial pressure drop as a function of the flow was obtained for the simplified problem of homogeneous equilibrium two-phase flow in a vertical, heated channel with a cosine axial heat flux shape. This analytic solution was then used to verify the predictions of the CONDOR computer code, which is used to evaluate the thermal-hydraulic performance of boiling water reactors. The results show excellent agreement between the analytic solution and CONDOR prediction.

  20. Comparison of experimental pulse-height distributions in germanium detectors with integrated-tiger-series-code predictions

    SciTech Connect

    Beutler, D.E.; Halbleib, J.A. ); Knott, D.P. )

    1989-12-01

    This paper reports pulse-height distributions in two different types of Ge detectors measured for a variety of medium-energy x-ray bremsstrahlung spectra. These measurements have been compared to predictions using the integrated tiger series (ITS) Monte Carlo electron/photon transport code. In general, the authors find excellent agreement between experiments and predictions using no free parameters. These results demonstrate that the ITS codes can predict the combined bremsstrahlung production and energy deposition with good precision (within measurement uncertainties). The one region of disagreement observed occurs for low-energy (<50 keV) photons using low-energy bremsstrahlung spectra. In this case the ITS codes appear to underestimate the produced and/or absorbed radiation by almost an order of magnitude.

  1. Predictive coding accounts of shared representations in parieto-insular networks.

    PubMed

    Ishida, Hiroaki; Suzuki, Keisuke; Grandi, Laura Clara

    2015-04-01

    The discovery of mirror neurons in the ventral premotor cortex (area F5) and inferior parietal cortex (area PFG) in the macaque monkey brain has provided the physiological evidence for direct matching of the intrinsic motor representations of the self and the visual image of the actions of others. The existence of mirror neurons implies that the brain has mechanisms reflecting shared self and other action representations. This may further imply that the neural basis self-body representations may also incorporate components that are shared with other-body representations. It is likely that such a mechanism is also involved in predicting other's touch sensations and emotions. However, the neural basis of shared body representations has remained unclear. Here, we propose a neural basis of body representation of the self and of others in both human and non-human primates. We review a series of behavioral and physiological findings which together paint a picture that the systems underlying such shared representations require integration of conscious exteroception and interoception subserved by a cortical sensory-motor network involving parieto-inner perisylvian circuits (the ventral intraparietal area [VIP]/inferior parietal area [PFG]-secondary somatosensory cortex [SII]/posterior insular cortex [pIC]/anterior insular cortex [aIC]). Based on these findings, we propose a computational mechanism of the shared body representation in the predictive coding (PC) framework. Our mechanism proposes that processes emerging from generative models embedded in these specific neuronal circuits play a pivotal role in distinguishing a self-specific body representation from a shared one. The model successfully accounts for normal and abnormal shared body phenomena such as mirror-touch synesthesia and somatoparaphrenia. In addition, it generates a set of testable experimental predictions.

  2. Rhythmic complexity and predictive coding: a novel approach to modeling rhythm and meter perception in music

    PubMed Central

    Vuust, Peter; Witek, Maria A. G.

    2014-01-01

    Musical rhythm, consisting of apparently abstract intervals of accented temporal events, has a remarkable capacity to move our minds and bodies. How does the cognitive system enable our experiences of rhythmically complex music? In this paper, we describe some common forms of rhythmic complexity in music and propose the theory of predictive coding (PC) as a framework for understanding how rhythm and rhythmic complexity are processed in the brain. We also consider why we feel so compelled by rhythmic tension in music. First, we consider theories of rhythm and meter perception, which provide hierarchical and computational approaches to modeling. Second, we present the theory of PC, which posits a hierarchical organization of brain responses reflecting fundamental, survival-related mechanisms associated with predicting future events. According to this theory, perception and learning is manifested through the brain’s Bayesian minimization of the error between the input to the brain and the brain’s prior expectations. Third, we develop a PC model of musical rhythm, in which rhythm perception is conceptualized as an interaction between what is heard (“rhythm”) and the brain’s anticipatory structuring of music (“meter”). Finally, we review empirical studies of the neural and behavioral effects of syncopation, polyrhythm and groove, and propose how these studies can be seen as special cases of the PC theory. We argue that musical rhythm exploits the brain’s general principles of prediction and propose that pleasure and desire for sensorimotor synchronization from musical rhythm may be a result of such mechanisms. PMID:25324813

  3. ER-Worker: A computer code to predict remediation worker exposure and safety hazards

    SciTech Connect

    Blaylock, B.P.; Campbell, A.C.; Hutchison, J.F.; Simek, M.A.P.; Sutherland, J.F.; Legg, J.L.

    1994-12-31

    The U.S. Department of Energy (DOE) has generated and disposed of large quantities of waste as a result of 50 years of nuclear weapons production. This waste has been disposed of in waste sites such as burial grounds, waste pits, holding ponds, and landfills. Many of these waste sites have begun to release contamination offsite and potentially pose risks to humans living or working in the vicinity of these sites. By 2019, DOE must meet its goals to achieve timely compliance with all applicable environmental requirements, clean up the 1989 inventory of hazardous and radioactive wastes at inactive sites and facilities, and safely and efficiently treat, store, and dispose of the waste generated by remediation and operating facilities. Remediation of DOE`s 13,000 facilities, and management of the current and future waste streams, will require the effort of thousands of workers. Workers, as defined here, are persons who directly participate in the cleanup or remediation of DOE sites. Remediation activities include the use of remediation technologies such as bioremediation, surface water controls, and contaminated soil excavation. This document describes a worker health risk evaluation methodology and computer code designed to predict risks associated with Environmental Restoration (ER) activities that are yet to be undertaken. The computer code, designated ER-WORKER, can be used to estimate worker risks across the DOE complex on a site-specific, installation-wide, or programmatic level. This approach generally follows the guidance suggested in the Risk Assessment Guidance for Superfund (RAGS) (EPA 1989a). Key principles from other important Environmental Protection Agency (EPA) and DOE guidance documents are incorporated into the methodology.

  4. Plastic Deformation of Accreted Planetesimals

    NASA Astrophysics Data System (ADS)

    Kadish, J.

    2005-08-01

    The early stages of planetesimal growth follow an accretion model (Weidenschilling, Icarus 2000), which influences the intrinsic strength of a body and may control how its shape evolves after growth. In previous work we have determined the stress field of an accreted planetesimal accounting for possible variation in the object's spin as it accretes (Kadish et al., IJSS In Press) At the end of growth, these objects are subject to transport mechanisms that can distribute them throughout the solar system. As they are transported these objects can be spun-up by tidal forces (Scheeres et al, Icarus 2000), YORP (Bottke et al., Asteroids III 2002), and collisions (Binzel et al., Asteroids II 1989). Such an increase of spin will cause perturbations to the initial stress field and may lead to failure. We are able to show analytically that failure is initiated on the object's surface and a plastic zone propagates inward as the object's spin is increased. If we model an accreted body as a conglomeration of rocks similar to a gravel or sand, the deformation in the region of failure is characterized using a Mohr-Coulomb failure criterion with negligible cohesion and zero hardening(e.g. Holsapple, Icarus 2001). Such a response is highly non-linear and must be solved using finite elements and iterative methods (Simo and Hughes, Computational Inelasticity 1998). Using the commercial finite element code ABAQUS, we present the shape deformation resulting from an elasto-plastic analysis of a spinning, self-gravitating accreted sphere that is spun-up after growth is complete. The methodology can be extended to model plastic deformation due to local failure for more complex planetesimal shapes, such as for the asteroid Kleopatra. This work has implications for the evolution of planetesimal shapes, the creation of binary and contact binary asteroids, and for the maximum spin rate of small planetary bodies.

  5. User's guide for a flat wake rotor inflow/wake velocity prediction code, DOWN

    NASA Technical Reports Server (NTRS)

    Wilson, John C.

    1991-01-01

    A computer code named DOWN was created to implement a flat wake theory for the calculation of rotor inflow and wake velocities. A brief description of the code methodology and instructions for its use are given. The code will be available from NASA's Computer Software Management and Information Center (COSMIC).

  6. Pulsed accretion in a variable protostar

    NASA Astrophysics Data System (ADS)

    Muzerolle, James; Furlan, Elise; Flaherty, Kevin; Balog, Zoltan; Gutermuth, Robert

    2013-01-01

    Periodic increases in luminosity arising from variable accretion rates have been predicted for some pre-main-sequence close binary stars as they grow from circumbinary disks. The phenomenon is known as pulsed accretion and can affect the orbital evolution and mass distribution of young binaries, as well as the potential for planet formation. Accretion variability is a common feature of young stars, with a large range of amplitudes and timescales as measured from multi-epoch observations at optical and infrared wavelengths. Periodic variations consistent with pulsed accretion have been seen in only a few young binaries via optical accretion tracers, albeit intermittently with accretion luminosity variations ranging from zero to 50 per cent from orbit to orbit. Here we report that the infrared luminosity of a young protostar (of age about 105 years) increases by a factor of ten in roughly one week every 25.34 days. We attribute this to pulsed accretion associated with an unseen binary companion. The strength and regularity of this accretion signal is surprising; it may be related to the very young age of the system, which is a factor of ten younger than the other pulsed accretors previously studied.

  7. Plasma physics of accreting neutron stars

    NASA Technical Reports Server (NTRS)

    Ghosh, Pranab; Lamb, Frederick K.

    1991-01-01

    Plasma concepts and phenomena that are needed to understand X- and gamma-ray sources are discussed. The capture of material from the wind or from the atmosphere or envelope of a binary companion star is described and the resulting types of accretion flows discussed. The reasons for the formation of a magnetosphere around the neutron star are explained. The qualitative features of the magnetospheres of accreting neutron stars are then described and compared with the qualitative features of the geomagnetosphere. The conditions for stable flow and for angular and linear momentum conservation are explained in the context of accretion by magnetic neutron stars and applied to obtain rough estimates of the scale of the magnetosphere. Accretion from Keplerian disks is then considered in some detail. The radial structure of geometrically thin disk flows, the interaction of disk flows with the neutron star magnetosphere, and models of steady accretion from Keplerian disks are described. Accretion torques and the resulting changes in the spin frequencies of rotating neutron stars are considered. The predicted behavior is then compared with observations of accretion-powered pulsars. Magnetospheric processes that may accelerate particles to very high energies, producing GeV and, perhaps, TeV gamma-rays are discussed. Finally, the mechanisms that decelerate and eventually stop accreting plasma at the surfaces of strongly magnetic neutron stars are described.

  8. Pulsed accretion in a variable protostar.

    PubMed

    Muzerolle, James; Furlan, Elise; Flaherty, Kevin; Balog, Zoltan; Gutermuth, Robert

    2013-01-17

    Periodic increases in luminosity arising from variable accretion rates have been predicted for some pre-main-sequence close binary stars as they grow from circumbinary disks. The phenomenon is known as pulsed accretion and can affect the orbital evolution and mass distribution of young binaries, as well as the potential for planet formation. Accretion variability is a common feature of young stars, with a large range of amplitudes and timescales as measured from multi-epoch observations at optical and infrared wavelengths. Periodic variations consistent with pulsed accretion have been seen in only a few young binaries via optical accretion tracers, albeit intermittently with accretion luminosity variations ranging from zero to 50 per cent from orbit to orbit. Here we report that the infrared luminosity of a young protostar (of age about 10(5) years) increases by a factor of ten in roughly one week every 25.34 days. We attribute this to pulsed accretion associated with an unseen binary companion. The strength and regularity of this accretion signal is surprising; it may be related to the very young age of the system, which is a factor of ten younger than the other pulsed accretors previously studied.

  9. A thermal NO(x) prediction model - Scalar computation module for CFD codes with fluid and kinetic effects

    NASA Technical Reports Server (NTRS)

    Mcbeath, Giorgio; Ghorashi, Bahman; Chun, Kue

    1993-01-01

    A thermal NO(x) prediction model is developed to interface with a CFD, k-epsilon based code. A converged solution from the CFD code is the input to the postprocessing model for prediction of thermal NO(x). The model uses a decoupled analysis to estimate the equilibrium level of (NO(x))e which is the constant rate limit. This value is used to estimate the flame (NO(x)) and in turn predict the rate of formation at each node using a two-step Zeldovich mechanism. The rate is fixed on the NO(x) production rate plot by estimating the time to reach equilibrium by a differential analysis based on the reaction: O + N2 = NO + N. The rate is integrated in the nonequilibrium time space based on the residence time at each node in the computational domain. The sum of all nodal predictions yields the total NO(x) level.

  10. Testing Convergence for Global Accretion Disks

    NASA Astrophysics Data System (ADS)

    Hawley, John F.; Richers, Sherwood A.; Guan, Xiaoyue; Krolik, Julian H.

    2013-08-01

    Global disk simulations provide a powerful tool for investigating accretion and the underlying magnetohydrodynamic turbulence driven by magneto-rotational instability (MRI). Using them to accurately predict quantities such as stress, accretion rate, and surface brightness profile requires that purely numerical effects, arising from both resolution and algorithm, be understood and controlled. We use the flux-conservative Athena code to conduct a series of experiments on disks having a variety of magnetic topologies to determine what constitutes adequate resolution. We develop and apply several resolution metrics: langQz rang and langQ phirang, the ratio of the grid zone size to the characteristic MRI wavelength, αmag, the ratio of the Maxwell stress to the magnetic pressure, and \\langle B_R^2\\rangle /\\langle B_\\phi ^2\\rangle, the ratio of radial to toroidal magnetic field energy. For the initial conditions considered here, adequate resolution is characterized by langQz rang >= 15, langQ phirang >= 20, αmag ≈ 0.45, and \\langle B_R^2\\rangle /\\langle B_\\phi ^2\\rangle \\approx 0.2. These values are associated with >=35 zones per scaleheight H, a result consistent with shearing box simulations. Numerical algorithm is also important. Use of the Harten-Lax-van Leer-Einfeldt flux solver or second-order interpolation can significantly degrade the effective resolution compared to the Harten-Lax-van Leer discontinuities flux solver and third-order interpolation. Resolution at this standard can be achieved only with large numbers of grid zones, arranged in a fashion that matches the symmetries of the problem and the scientific goals of the simulation. Without it, however, quantitative measures important to predictions of observables are subject to large systematic errors.

  11. Self-consistent modeling of DEMOs with 1.5D BALDUR integrated predictive modeling code

    NASA Astrophysics Data System (ADS)

    Wisitsorasak, A.; Somjinda, B.; Promping, J.; Onjun, T.

    2017-02-01

    Self-consistent simulations of four DEMO designs proposed by teams from China, Europe, India, and Korea are carried out using the BALDUR integrated predictive modeling code in which theory-based models are used, for both core transport and boundary conditions. In these simulations, a combination of the NCLASS neoclassical transport and multimode (MMM95) anomalous transport model is used to compute a core transport. The boundary is taken to be at the top of the pedestal, where the pedestal values are described using a pedestal temperature model based on a combination of magnetic and flow shear stabilization, pedestal width scaling and an infinite- n ballooning pressure gradient model and a pedestal density model based on a line average density. Even though an optimistic scenario is considered, the simulation results suggest that, with the exclusion of ELMs, the fusion gain Q obtained for these reactors is pessimistic compared to their original designs, i.e. 52% for the Chinese design, 63% for the European design, 22% for the Korean design, and 26% for the Indian design. In addition, the predicted bootstrap current fractions are also found to be lower than their original designs, as fractions of their original designs, i.e. 0.49 (China), 0.66 (Europe), and 0.58 (India). Furthermore, in relation to sensitivity, it is found that increasing values of the auxiliary heating power and the electron line average density from their design values yield an enhancement of fusion performance. In addition, inclusion of sawtooth oscillation effects demonstrate positive impacts on the plasma and fusion performance in European, Indian and Korean DEMOs, but degrade the performance in the Chinese DEMO.

  12. Large-scale prediction of long non-coding RNA functions in a coding–non-coding gene co-expression network

    PubMed Central

    Liao, Qi; Liu, Changning; Yuan, Xiongying; Kang, Shuli; Miao, Ruoyu; Xiao, Hui; Zhao, Guoguang; Luo, Haitao; Bu, Dechao; Zhao, Haitao; Skogerbø, Geir; Wu, Zhongdao; Zhao, Yi

    2011-01-01

    Although accumulating evidence has provided insight into the various functions of long-non-coding RNAs (lncRNAs), the exact functions of the majority of such transcripts are still unknown. Here, we report the first computational annotation of lncRNA functions based on public microarray expression profiles. A coding–non-coding gene co-expression (CNC) network was constructed from re-annotated Affymetrix Mouse Genome Array data. Probable functions for altogether 340 lncRNAs were predicted based on topological or other network characteristics, such as module sharing, association with network hubs and combinations of co-expression and genomic adjacency. The functions annotated to the lncRNAs mainly involve organ or tissue development (e.g. neuron, eye and muscle development), cellular transport (e.g. neuronal transport and sodium ion, acid or lipid transport) or metabolic processes (e.g. involving macromolecules, phosphocreatine and tyrosine). PMID:21247874

  13. Partial accretion regime of accreting millisecond pulsars

    NASA Astrophysics Data System (ADS)

    Eksi, Kazim

    2016-07-01

    The inner parts of the disks around neutron stars in low mass X-ray binaries may become geometrically thick due to inhibition of accretion at the disk mid-plane when the central object is rotating rapidly. In such a case matter inflowing through the disk may keep accreting onto the poles of the neutron star from the parts of the disk away from the disk mid-plane while the matter is propelled at the disk mid-plane. An important ingredient of the evolution of millisecond pulsars is then the fraction of the inflowing matter that can accrete onto the poles in the fast rotation regime depending on the fastness parameter. This ``soft'' propeller regime may be associated with the rapid decay stage observed in the light curves of several accreting millisecond pulsars. To date only a few studies considered the partial accretion regime. By using geometrical arguments we improve the existing studies and test the model by reproducing the lightcurves of millisecond X-ray pulsars via time dependent simulations of disk evolution. We also present analytical solutions that represent disks with partial accretion.

  14. A 4.8 kbps code-excited linear predictive coder

    NASA Technical Reports Server (NTRS)

    Tremain, Thomas E.; Campbell, Joseph P., Jr.; Welch, Vanoy C.

    1988-01-01

    A secure voice system STU-3 capable of providing end-to-end secure voice communications (1984) was developed. The terminal for the new system will be built around the standard LPC-10 voice processor algorithm. The performance of the present STU-3 processor is considered to be good, its response to nonspeech sounds such as whistles, coughs and impulse-like noises may not be completely acceptable. Speech in noisy environments also causes problems with the LPC-10 voice algorithm. In addition, there is always a demand for something better. It is hoped that LPC-10's 2.4 kbps voice performance will be complemented with a very high quality speech coder operating at a higher data rate. This new coder is one of a number of candidate algorithms being considered for an upgraded version of the STU-3 in late 1989. The problems of designing a code-excited linear predictive (CELP) coder to provide very high quality speech at a 4.8 kbps data rate that can be implemented on today's hardware are considered.

  15. Liner Optimization Studies Using the Ducted Fan Noise Prediction Code TBIEM3D

    NASA Technical Reports Server (NTRS)

    Dunn, M. H.; Farassat, F.

    1998-01-01

    In this paper we demonstrate the usefulness of the ducted fan noise prediction code TBIEM3D as a liner optimization design tool. Boundary conditions on the interior duct wall allow for hard walls or a locally reacting liner with axially segmented, circumferentially uniform impedance. Two liner optimization studies are considered in which farfield noise attenuation due to the presence of a liner is maximized by adjusting the liner impedance. In the first example, the dependence of optimal liner impedance on frequency and liner length is examined. Results show that both the optimal impedance and attenuation levels are significantly influenced by liner length and frequency. In the second example, TBIEM3D is used to compare radiated sound pressure levels between optimal and non-optimal liner cases at conditions designed to simulate take-off. It is shown that significant noise reduction is achieved for most of the sound field by selecting the optimal or near optimal liner impedance. Our results also indicate that there is relatively large region of the impedance plane over which optimal or near optimal liner behavior is attainable. This is an important conclusion for the designer since there are variations in liner characteristics due to manufacturing imprecisions.

  16. Limiting Accretion onto Massive Stars by Fragmentation-Induced Starvation

    SciTech Connect

    Peters, Thomas; Klessen, Ralf S.; Mac Low, Mordecai-Mark; Banerjee, Robi; /ZAH, Heidelberg

    2010-08-25

    Massive stars influence their surroundings through radiation, winds, and supernova explosions far out of proportion to their small numbers. However, the physical processes that initiate and govern the birth of massive stars remain poorly understood. Two widely discussed models are monolithic collapse of molecular cloud cores and competitive accretion. To learn more about massive star formation, we perform simulations of the collapse of rotating, massive, cloud cores including radiative heating by both non-ionizing and ionizing radiation using the FLASH adaptive mesh refinement code. These simulations show fragmentation from gravitational instability in the enormously dense accretion flows required to build up massive stars. Secondary stars form rapidly in these flows and accrete mass that would have otherwise been consumed by the massive star in the center, in a process that we term fragmentation-induced starvation. This explains why massive stars are usually found as members of high-order stellar systems that themselves belong to large clusters containing stars of all masses. The radiative heating does not prevent fragmentation, but does lead to a higher Jeans mass, resulting in fewer and more massive stars than would form without the heating. This mechanism reproduces the observed relation between the total stellar mass in the cluster and the mass of the largest star. It predicts strong clumping and filamentary structure in the center of collapsing cores, as has recently been observed. We speculate that a similar mechanism will act during primordial star formation.

  17. ACCRETION DISKS AROUND KICKED BLACK HOLES: POST-KICK DYNAMICS

    SciTech Connect

    Ponce, Marcelo; Faber, Joshua A.; Lombardi, James C. E-mail: jafsma@rit.edu

    2012-01-20

    Numerical calculations of merging black hole binaries indicate that asymmetric emission of gravitational radiation can kick the merged black hole at up to thousands of km s{sup -1}, and a number of systems have been observed recently whose properties are consistent with an active galactic nucleus containing a supermassive black hole moving with substantial velocity with respect to its broader accretion disk. We study here the effect of an impulsive kick delivered to a black hole on the dynamical evolution of its accretion disk using a smoothed particle hydrodynamics code, focusing attention on the role played by the kick angle with respect to the orbital angular momentum vector of the pre-kicked disk. We find that for more vertical kicks, for which the angle between the kick and the normal vector to the disk {theta} {approx}< 30 Degree-Sign , a gap remains present in the inner disk, in accordance with the prediction from an analytic collisionless Keplerian disk model, while for more oblique kicks with {theta} {approx}> 45 Degree-Sign , matter rapidly accretes toward the black hole. There is a systematic trend for higher potential luminosities for more oblique kick angles for a given black hole mass, disk mass, and kick velocity, and we find large amplitude oscillations in time in the case of a kick oriented 60 Degree-Sign from the vertical.

  18. LIMITING ACCRETION ONTO MASSIVE STARS BY FRAGMENTATION-INDUCED STARVATION

    SciTech Connect

    Peters, Thomas; Klessen, Ralf S.; Banerjee, Robi; Low, Mordecai-Mark Mac

    2010-12-10

    Massive stars influence their surroundings through radiation, winds, and supernova explosions far out of proportion to their small numbers. However, the physical processes that initiate and govern the birth of massive stars remain poorly understood. Two widely discussed models are monolithic collapse of molecular cloud cores and competitive accretion. To learn more about massive star formation, we perform and analyze simulations of the collapse of rotating, massive, cloud cores including radiative heating by both non-ionizing and ionizing radiation using the FLASH adaptive-mesh refinement code. These simulations show fragmentation from gravitational instability in the enormously dense accretion flows required to build up massive stars. Secondary stars form rapidly in these flows and accrete mass that would have otherwise been consumed by the massive star in the center, in a process that we term fragmentation-induced starvation. This explains why massive stars are usually found as members of high-order stellar systems that themselves belong to large clusters containing stars of all masses. The radiative heating does not prevent fragmentation, but does lead to a higher Jeans mass, resulting in fewer and more massive stars than would form without the heating. This mechanism reproduces the observed relation between the total stellar mass in the cluster and the mass of the largest star. It predicts strong clumping and filamentary structure in the center of collapsing cores, as has recently been observed. We speculate that a similar mechanism will act during primordial star formation.

  19. Extended Lyα emission from cold accretion streams

    NASA Astrophysics Data System (ADS)

    Rosdahl, J.; Blaizot, J.

    2012-06-01

    We investigate the observability of cold accretion streams at redshift 3 via Lyα emission and the feasibility of cold accretion as the main driver of Lyα blobs (LABs). We run cosmological zoom simulations focusing on three haloes spanning almost two orders of magnitude in mass, roughly from 1011 to ?. We use a version of the RAMSES code that includes radiative transfer of ultraviolet (UV) photons, and we employ a refinement strategy that allows us to resolve accretion streams in their natural environment to an unprecedented level. For the first time in a simulation, we self-consistently model self-shielding in the cold streams from the cosmological UV background, which enables us to predict their temperatures, ionization states and Lyα luminosities with improved accuracy. We find the efficiency of gravitational heating in cold streams in a ? halo to be around 10-20 per cent throughout most of the halo but reaching much higher values close to the centre. As a result, most of the Lyα luminosity comes from gas which is concentrated at the central 20 per cent of the halo radius, leading to Lyα emission which is not extended. In more massive haloes, of ?, cold accretion is complex and disrupted, and gravitational heating does not happen as a steady process. Ignoring the factors of Lyα scattering, local UV enhancement and supernovae feedback, the cold 'messy' accretion alone in these massive haloes can produce LABs that largely agree with observations in terms of morphology, extent and luminosity. Our simulations slightly and systematically overpredict LAB abundances, perhaps hinting that the interplay of these ignored factors may have a negative net effect on extent and luminosity. We predict that a factor of a few increase in sensitivity from current observational limits should unambiguously reveal continuum-free accretion streams around massive galaxies at z= 3. Animations of our simulations can be found at and are available as Supporting Information with the

  20. Verification of computational aerodynamic predictions for complex hypersonic vehicles using the INCA{trademark} code

    SciTech Connect

    Payne, J.L.; Walker, M.A.

    1995-01-01

    This paper describes a process of combining two state-of-the-art CFD tools, SPRINT and INCA, in a manner which extends the utility of both codes beyond what is possible from either code alone. The speed and efficiency of the PNS code, SPRING, has been combined with the capability of a Navier-Stokes code to model fully elliptic, viscous separated regions on high performance, high speed flight systems. The coupled SPRINT/INCA capability is applicable for design and evaluation of high speed flight vehicles in the supersonic to hypersonic speed regimes. This paper describes the codes involved, the interface process and a few selected test cases which illustrate the SPRINT/INCA coupling process. Results have shown that the combination of SPRINT and INCA produces correct results and can lead to improved computational analyses for complex, three-dimensional problems.

  1. Modification of the PARC Navier-Stokes Code to predict rocket engine nozzle performance

    NASA Technical Reports Server (NTRS)

    Collins, Frank G.; Myruski, Bryan; Orr, Joseph L.

    1990-01-01

    The PARC2D Navier-Stokes Code was modified to compute the performance parameters for rocket engine nozzles. The perfect gas code was applied to the SSME engine nozzle for inviscid, laminar and turbulent flow. Inviscid computations compare well with Rocketdyne computations. Performance degradation due to the boundary layers is very reasonable. Application of the code to nontraditional nozzle geometries and to low Reynolds nozzles is demonstrated. Modification of the code for equilibrium H2/O2 chemistry is described. Thermodynamic and equilibrium constants are determined from statistical mechanics and the transport properties from exact kinetic theory, using collison integrals determined from appropriate intermolecular potentials. The equilibrium code was used to compute the SSME flowfield. Modifications of the flowfield due to the change of composition are described.

  2. COSAL: A black-box compressible stability analysis code for transition prediction in three-dimensional boundary layers

    NASA Technical Reports Server (NTRS)

    Malik, M. R.

    1982-01-01

    A fast computer code COSAL for transition prediction in three dimensional boundary layers using compressible stability analysis is described. The compressible stability eigenvalue problem is solved using a finite difference method, and the code is a black box in the sense that no guess of the eigenvalue is required from the user. Several optimization procedures were incorporated into COSAL to calculate integrated growth rates (N factor) for transition correlation for swept and tapered laminar flow control wings using the well known e to the Nth power method. A user's guide to the program is provided.

  3. STGSTK: A computer code for predicting multistage axial flow compressor performance by a meanline stage stacking method

    NASA Technical Reports Server (NTRS)

    Steinke, R. J.

    1982-01-01

    A FORTRAN computer code is presented for off-design performance prediction of axial-flow compressors. Stage and compressor performance is obtained by a stage-stacking method that uses representative velocity diagrams at rotor inlet and outlet meanline radii. The code has options for: (1) direct user input or calculation of nondimensional stage characteristics; (2) adjustment of stage characteristics for off-design speed and blade setting angle; (3) adjustment of rotor deviation angle for off-design conditions; and (4) SI or U.S. customary units. Correlations from experimental data are used to model real flow conditions. Calculations are compared with experimental data.

  4. Promises and Problems of Pebble Accretion

    NASA Astrophysics Data System (ADS)

    Kretke, Katherine A.; Levison, H. F.

    2013-10-01

    Despite the large number of exoplanets indicating that giant planets are a common outcome of the star formation process, theoretical models still struggle to explain how ~10 Earth mass rocky/icy embryos can form within the lifetimes of gaseous circumstellar disks. In recent years, aerodynamic-aided accretion of ``pebbles,'' particles ranging from millimeters to decimeters in size, has been suggested as a potential solution to this long-standing problem. Local simulations, simulations which look at the detailed behavior of these pebbles in the vicinity of a planetary embryo, have shown that the potential planetary growth rates can be surprisingly fast. If one assumes that most of the mass in a protoplanetary disk resides in these pebble-sized particles, a Mars mass core could grow to 10 Earth masses in only a few thousand years. However, these local studies cannot investigate how this accretion process behaves in the more complicated, multi-planet environment. We have incorporated the local accretion physics into LIPAD, a Lagrangian code which can follow the collisional / accretional / dynamical evolution of a planetary system, to investigate the how this pebble accretion will manifest itself in the larger planet formation picture. We present how these more comprehensive models raise challenges to using pebble accretion to form observed planetary systems.

  5. Problems and Promises of Pebble Accretion

    NASA Astrophysics Data System (ADS)

    Kretke, Katherine A.; Levison, H. F.

    2013-05-01

    Abstract (2,250 Maximum Characters): Despite the large number of exoplanets indicating that planets are a common outcome of the star formation process, theoretical models still struggle to explain how ~10 Earth mass rocky/icy embryos can form within the lifetimes of gaseous circumstellar disks. Recently, aerodynamic-aided accretion of ``pebbles,'' particles ranging from millimeters to decimeters in size, has been suggested as a potential solution to this long-standing problem. Local simulations, simulations which look at the detailed behavior of these pebbles in the vicinity of a planetary embryo, have shown that the potential planetary growth rates can be surprisingly fast. If one assumes that most of the mass in a protoplanetary disk resides in these pebble-sized particles, a Mars mass core could grow to 10 Earth masses in only a few thousand years. However, these local studies cannot investigate how this accretion process behaves in the more complicated, multi-planet environment. We have incorporated a prescription of this pebble accretion into LIPAD, a Lagrangian code which can follow the collisional/accretional/dynamical evolution of a planetary system, to investigate the how this pebble accretion will manifest itself in the larger planet formation picture. We discuss how these more comprehensive models present challenges for using pebble accretion to form observed planetary systems.

  6. The rhythms of predictive coding? Pre-stimulus phase modulates the influence of shape perception on luminance judgments

    PubMed Central

    Han, Biao; VanRullen, Rufin

    2017-01-01

    Predictive coding is an influential model emphasizing interactions between feedforward and feedback signals. Here, we investigated the temporal dynamics of these interactions. Two gray disks with different versions of the same stimulus, one enabling predictive feedback (a 3D-shape) and one impeding it (random-lines), were simultaneously presented on the left and right of fixation. Human subjects judged the luminance of the two disks while EEG was recorded. The choice of 3D-shape or random-lines as the brighter disk was used to assess the influence of feedback signals on sensory processing in each trial (i.e., as a measure of post-stimulus predictive coding efficiency). Independently of the spatial response (left/right), we found that this choice fluctuated along with the pre-stimulus phase of two spontaneous oscillations: a ~5 Hz oscillation in contralateral frontal electrodes and a ~16 Hz oscillation in contralateral occipital electrodes. This pattern of results demonstrates that predictive coding is a rhythmic process, and suggests that it could take advantage of faster oscillations in low-level areas and slower oscillations in high-level areas. PMID:28262824

  7. Euler Technology Assessment for Preliminary Aircraft Design: Compressibility Predictions by Employing the Cartesian Unstructured Grid SPLITFLOW Code

    NASA Technical Reports Server (NTRS)

    Finley, Dennis B.; Karman, Steve L., Jr.

    1996-01-01

    The objective of the second phase of the Euler Technology Assessment program was to evaluate the ability of Euler computational fluid dynamics codes to predict compressible flow effects over a generic fighter wind tunnel model. This portion of the study was conducted by Lockheed Martin Tactical Aircraft Systems, using an in-house Cartesian-grid code called SPLITFLOW. The Cartesian grid technique offers several advantages, including ease of volume grid generation and reduced number of cells compared to other grid schemes. SPLITFLOW also includes grid adaption of the volume grid during the solution to resolve high-gradient regions. The SPLITFLOW code predictions of configuration forces and moments are shown to be adequate for preliminary design, including predictions of sideslip effects and the effects of geometry variations at low and high angles-of-attack. The transonic pressure prediction capabilities of SPLITFLOW are shown to be improved over subsonic comparisons. The time required to generate the results from initial surface data is on the order of several hours, including grid generation, which is compatible with the needs of the design environment.

  8. Using self-similarity compensation for improving inter-layer prediction in scalable 3D holoscopic video coding

    NASA Astrophysics Data System (ADS)

    Conti, Caroline; Nunes, Paulo; Ducla Soares, Luís.

    2013-09-01

    Holoscopic imaging, also known as integral imaging, has been recently attracting the attention of the research community, as a promising glassless 3D technology due to its ability to create a more realistic depth illusion than the current stereoscopic or multiview solutions. However, in order to gradually introduce this technology into the consumer market and to efficiently deliver 3D holoscopic content to end-users, backward compatibility with legacy displays is essential. Consequently, to enable 3D holoscopic content to be delivered and presented on legacy displays, a display scalable 3D holoscopic coding approach is required. Hence, this paper presents a display scalable architecture for 3D holoscopic video coding with a three-layer approach, where each layer represents a different level of display scalability: Layer 0 - a single 2D view; Layer 1 - 3D stereo or multiview; and Layer 2 - the full 3D holoscopic content. In this context, a prediction method is proposed, which combines inter-layer prediction, aiming to exploit the existing redundancy between the multiview and the 3D holoscopic layers, with self-similarity compensated prediction (previously proposed by the authors for non-scalable 3D holoscopic video coding), aiming to exploit the spatial redundancy inherent to the 3D holoscopic enhancement layer. Experimental results show that the proposed combined prediction can improve significantly the rate-distortion performance of scalable 3D holoscopic video coding with respect to the authors' previously proposed solutions, where only inter-layer or only self-similarity prediction is used.

  9. Assessing the Predictive Capability of the LIFEIV Nuclear Fuel Performance Code using Sequential Calibration

    SciTech Connect

    Stull, Christopher J.; Williams, Brian J.; Unal, Cetin

    2012-07-05

    This report considers the problem of calibrating a numerical model to data from an experimental campaign (or series of experimental tests). The issue is that when an experimental campaign is proposed, only the input parameters associated with each experiment are known (i.e. outputs are not known because the experiments have yet to be conducted). Faced with such a situation, it would be beneficial from the standpoint of resource management to carefully consider the sequence in which the experiments are conducted. In this way, the resources available for experimental tests may be allocated in a way that best 'informs' the calibration of the numerical model. To address this concern, the authors propose decomposing the input design space of the experimental campaign into its principal components. Subsequently, the utility (to be explained) of each experimental test to the principal components of the input design space is used to formulate the sequence in which the experimental tests will be used for model calibration purposes. The results reported herein build on those presented and discussed in [1,2] wherein Verification & Validation and Uncertainty Quantification (VU) capabilities were applied to the nuclear fuel performance code LIFEIV. In addition to the raw results from the sequential calibration studies derived from the above, a description of the data within the context of the Predictive Maturity Index (PMI) will also be provided. The PMI [3,4] is a metric initiated and developed at Los Alamos National Laboratory to quantitatively describe the ability of a numerical model to make predictions in the absence of experimental data, where it is noted that 'predictions in the absence of experimental data' is not synonymous with extrapolation. This simply reflects the fact that resources do not exist such that each and every execution of the numerical model can be compared against experimental data. If such resources existed, the justification for numerical models

  10. Obscured accretion from AGN surveys

    NASA Astrophysics Data System (ADS)

    Vignali, Cristian

    2014-07-01

    Recent models of super-massive black hole (SMBH) and host galaxy joint evolution predict the presence of a key phase where accretion, traced by obscured Active Galactic Nuclei (AGN) emission, is coupled with powerful star formation. Then feedback processes likely self-regulate the SMBH growth and quench the star-formation activity. AGN in this important evolutionary phase have been revealed in the last decade via surveys at different wavelengths. On the one hand, moderate-to-deep X-ray surveys have allowed a systematic search for heavily obscured AGN, up to very high redshifts (z~5). On the other hand, infrared/optical surveys have been invaluable in offering complementary methods to select obscured AGN also in cases where the nuclear X-ray emission below 10 keV is largely hidden to our view. In this review I will present my personal perspective of the field of obscured accretion from AGN surveys.

  11. Dynamics of core accretion

    DOE PAGES

    Nelson, Andrew F.; Ruffert, Maximilian

    2012-12-21

    In this paper, we perform three-dimensional hydrodynamic simulations of gas flowing around a planetary core of mass Mpl = 10M⊕ embedded in a near Keplerian background flow, using a modified shearing box approximation. We assume an ideal gas behaviour following an equation of state with a fixed ratio of the specific heats, γ = 1.42, consistent with the conditions of a moderate-temperature background disc with solar composition. No radiative heating or cooling is included in the models. We employ a nested grid hydrodynamic code implementing the ‘Piecewise Parabolic Method’ with as many as six fixed nested grids, providing spatial resolutionmore » on the finest grid comparable to the present-day diameters of Neptune and Uranus. We find that a strongly dynamically active flow develops such that no static envelope can form. The activity is not sensitive to plausible variations in the rotation curve of the underlying disc. It is sensitive to the thermodynamic treatment of the gas, as modelled by prescribed equations of state (either ‘locally isothermal’ or ‘locally isentropic’) and the temperature of the background disc material. The activity is also sensitive to the shape and depth of the core's gravitational potential, through its mass and gravitational softening coefficient. Each of these factors influences the magnitude and character of hydrodynamic feedback of the small-scale flow on the background, and we conclude that accurate modelling of such feedback is critical to a complete understanding of the core accretion process. The varying flow pattern gives rise to large, irregular eruptions of matter from the region around the core which return matter to the background flow: mass in the envelope at one time may not be found in the envelope at any later time. No net mass accretion into the envelope is observed over the course of the simulation and none is expected, due to our neglect of cooling. Except in cases of very rapid cooling however, as

  12. Dynamics of core accretion

    SciTech Connect

    Nelson, Andrew F.; Ruffert, Maximilian

    2012-12-21

    In this paper, we perform three-dimensional hydrodynamic simulations of gas flowing around a planetary core of mass Mpl = 10M embedded in a near Keplerian background flow, using a modified shearing box approximation. We assume an ideal gas behaviour following an equation of state with a fixed ratio of the specific heats, γ = 1.42, consistent with the conditions of a moderate-temperature background disc with solar composition. No radiative heating or cooling is included in the models. We employ a nested grid hydrodynamic code implementing the ‘Piecewise Parabolic Method’ with as many as six fixed nested grids, providing spatial resolution on the finest grid comparable to the present-day diameters of Neptune and Uranus. We find that a strongly dynamically active flow develops such that no static envelope can form. The activity is not sensitive to plausible variations in the rotation curve of the underlying disc. It is sensitive to the thermodynamic treatment of the gas, as modelled by prescribed equations of state (either ‘locally isothermal’ or ‘locally isentropic’) and the temperature of the background disc material. The activity is also sensitive to the shape and depth of the core's gravitational potential, through its mass and gravitational softening coefficient. Each of these factors influences the magnitude and character of hydrodynamic feedback of the small-scale flow on the background, and we conclude that accurate modelling of such feedback is critical to a complete understanding of the core accretion process. The varying flow pattern gives rise to large, irregular eruptions of matter from the region around the core which return matter to the background flow: mass in the envelope at one time may not be found in the envelope at any later time. No net mass accretion into the envelope is observed over the course of the simulation and none is expected, due to our neglect of cooling. Except in cases of very rapid cooling

  13. On the role of disks in the formation of stellar systems: A numerical parameter study of rapid accretion

    SciTech Connect

    Kratter, Kaitlin M.; Matzner, Christopher D.; Krumholz, Mark R.; Klein, Richard I.

    2009-12-23

    We study rapidly accreting, gravitationally unstable disks with a series of idealized global, numerical experiments using the code ORION. Our numerical parameter study focuses on protostellar disks, showing that one can predict disk behavior and the multiplicity of the accreting star system as a function of two dimensionless parameters which compare the infall rate to the disk sound speed and orbital period. Although gravitational instabilities become strong, we find that fragmentation into binary or multiple systems occurs only when material falls in several times more rapidly than the canonical isothermal limit. The disk-to-star accretion rate is proportional to the infall rate and governed by gravitational torques generated by low-m spiral modes. Furthermore, we also confirm the existence of a maximum stable disk mass: disks that exceed ~50% of the total system mass are subject to fragmentation and the subsequent formation of binary companions.

  14. On the role of disks in the formation of stellar systems: A numerical parameter study of rapid accretion

    DOE PAGES

    Kratter, Kaitlin M.; Matzner, Christopher D.; Krumholz, Mark R.; ...

    2009-12-23

    We study rapidly accreting, gravitationally unstable disks with a series of idealized global, numerical experiments using the code ORION. Our numerical parameter study focuses on protostellar disks, showing that one can predict disk behavior and the multiplicity of the accreting star system as a function of two dimensionless parameters which compare the infall rate to the disk sound speed and orbital period. Although gravitational instabilities become strong, we find that fragmentation into binary or multiple systems occurs only when material falls in several times more rapidly than the canonical isothermal limit. The disk-to-star accretion rate is proportional to the infallmore » rate and governed by gravitational torques generated by low-m spiral modes. Furthermore, we also confirm the existence of a maximum stable disk mass: disks that exceed ~50% of the total system mass are subject to fragmentation and the subsequent formation of binary companions.« less

  15. Orbitofrontal Cortex Signals Expected Outcomes with Predictive Codes When Stable Contingencies Promote the Integration of Reward History.

    PubMed

    Riceberg, Justin S; Shapiro, Matthew L

    2017-02-22

    Memory can inform goal-directed behavior by linking current opportunities to past outcomes. The orbitofrontal cortex (OFC) may guide value-based responses by integrating the history of stimulus-reward associations into expected outcomes, representations of predicted hedonic value and quality. Alternatively, the OFC may rapidly compute flexible "online" reward predictions by associating stimuli with the latest outcome. OFC neurons develop predictive codes when rats learn to associate arbitrary stimuli with outcomes, but the extent to which predictive coding depends on most recent events and the integrated history of rewards is unclear. To investigate how reward history modulates OFC activity, we recorded OFC ensembles as rats performed spatial discriminations that differed only in the number of rewarded trials between goal reversals. The firing rate of single OFC neurons distinguished identical behaviors guided by different goals. When >20 rewarded trials separated goal switches, OFC ensembles developed stable and anticorrelated population vectors that predicted overall choice accuracy and the goal selected in single trials. When <10 rewarded trials separated goal switches, OFC population vectors decorrelated rapidly after each switch, but did not develop anticorrelated firing patterns or predict choice accuracy. The results show that, whereas OFC signals respond rapidly to contingency changes, they predict choices only when reward history is relatively stable, suggesting that consecutive rewarded episodes are needed for OFC computations that integrate reward history into expected outcomes.SIGNIFICANCE STATEMENT Adapting to changing contingencies and making decisions engages the orbitofrontal cortex (OFC). Previous work shows that OFC function can either improve or impair learning depending on reward stability, suggesting that OFC guides behavior optimally when contingencies apply consistently. The mechanisms that link reward history to OFC computations remain

  16. Fan Noise Prediction System Development: Source/Radiation Field Coupling and Workstation Conversion for the Acoustic Radiation Code

    NASA Technical Reports Server (NTRS)

    Meyer, H. D.

    1993-01-01

    The Acoustic Radiation Code (ARC) is a finite element program used on the IBM mainframe to predict far-field acoustic radiation from a turbofan engine inlet. In this report, requirements for developers of internal aerodynamic codes regarding use of their program output an input for the ARC are discussed. More specifically, the particular input needed from the Bolt, Beranek and Newman/Pratt and Whitney (turbofan source noise generation) Code (BBN/PWC) is described. In a separate analysis, a method of coupling the source and radiation models, that recognizes waves crossing the interface in both directions, has been derived. A preliminary version of the coupled code has been developed and used for initial evaluation of coupling issues. Results thus far have shown that reflection from the inlet is sufficient to indicate that full coupling of the source and radiation fields is needed for accurate noise predictions ' Also, for this contract, the ARC has been modified for use on the Sun and Silicon Graphics Iris UNIX workstations. Changes and additions involved in this effort are described in an appendix.

  17. The HART II International Workshop: An Assessment of the State-of-the-Art in Comprehensive Code Prediction

    NASA Technical Reports Server (NTRS)

    vanderWall, Berend G.; Lim, Joon W.; Smith, Marilyn J.; Jung, Sung N.; Bailly, Joelle; Baeder, James D.; Boyd, D. Douglas, Jr.

    2013-01-01

    Significant advancements in computational fluid dynamics (CFD) and their coupling with computational structural dynamics (CSD, or comprehensive codes) for rotorcraft applications have been achieved recently. Despite this, CSD codes with their engineering level of modeling the rotor blade dynamics, the unsteady sectional aerodynamics and the vortical wake are still the workhorse for the majority of applications. This is especially true when a large number of parameter variations is to be performed and their impact on performance, structural loads, vibration and noise is to be judged in an approximate yet reliable and as accurate as possible manner. In this article, the capabilities of such codes are evaluated using the HART II International Workshop database, focusing on a typical descent operating condition which includes strong blade-vortex interactions. A companion article addresses the CFD/CSD coupled approach. Three cases are of interest: the baseline case and two cases with 3/rev higher harmonic blade root pitch control (HHC) with different control phases employed. One setting is for minimum blade-vortex interaction noise radiation and the other one for minimum vibration generation. The challenge is to correctly predict the wake physics-especially for the cases with HHC-and all the dynamics, aerodynamics, modifications of the wake structure and the aero-acoustics coming with it. It is observed that the comprehensive codes used today have a surprisingly good predictive capability when they appropriately account for all of the physics involved. The minimum requirements to obtain these results are outlined.

  18. An Assessment of Comprehensive Code Prediction State-of-the-Art Using the HART II International Workshop Data

    NASA Technical Reports Server (NTRS)

    vanderWall, Berend G.; Lim, Joon W.; Smith, Marilyn J.; Jung, Sung N.; Bailly, Joelle; Baeder, James D.; Boyd, D. Douglas, Jr.

    2012-01-01

    Despite significant advancements in computational fluid dynamics and their coupling with computational structural dynamics (= CSD, or comprehensive codes) for rotorcraft applications, CSD codes with their engineering level of modeling the rotor blade dynamics, the unsteady sectional aerodynamics and the vortical wake are still the workhorse for the majority of applications. This is especially true when a large number of parameter variations is to be performed and their impact on performance, structural loads, vibration and noise is to be judged in an approximate yet reliable and as accurate as possible manner. In this paper, the capabilities of such codes are evaluated using the HART II Inter- national Workshop data base, focusing on a typical descent operating condition which includes strong blade-vortex interactions. Three cases are of interest: the baseline case and two cases with 3/rev higher harmonic blade root pitch control (HHC) with different control phases employed. One setting is for minimum blade-vortex interaction noise radiation and the other one for minimum vibration generation. The challenge is to correctly predict the wake physics - especially for the cases with HHC - and all the dynamics, aerodynamics, modifications of the wake structure and the aero-acoustics coming with it. It is observed that the comprehensive codes used today have a surprisingly good predictive capability when they appropriately account for all of the physics involved. The minimum requirements to obtain these results are outlined.

  19. Hyperbolic Space Sparse Coding with Its Application on Prediction of Alzheimer’s Disease in Mild Cognitive Impairment

    PubMed Central

    Zhang, Jie; Shi, Jie; Stonnington, Cynthia; Li, Qingyang; Gutman, Boris A.; Chen, Kewei; Reiman, Eric M.; Caselli, Richard J.; Thompson, Paul M.; Ye, Jieping; Wang, Yalin

    2016-01-01

    Mild Cognitive Impairment (MCI) is a transitional stage between normal age-related cognitive decline and Alzheimer’s disease (AD). Here we introduce a hyperbolic space sparse coding method to predict impending decline of MCI patients to dementia using surface measures of ventricular enlargement. First, we compute diffeomorphic mappings between ventricular surfaces using a canonical hyperbolic parameter space with consistent boundary conditions and surface tensor-based morphometry is computed to measure local surface deformations. Second, ring-shaped patches of TBM features are selected according to the geometric structure of the hyperbolic parameter space to initialize a dictionary. Sparse coding is then applied on the patch features to learn sparse codes and update the dictionary. Finally, we adopt max-pooling to reduce the feature dimensions and apply Adaboost to predict AD in MCI patients (N = 133) from the Alzheimer’s Disease Neuroimaging Initiative baseline dataset. Our work achieved an accuracy rate of 96.7% and outperformed some other morphometry measures. The hyperbolic space sparse coding method may offer a more sensitive tool to study AD and its early symptom. PMID:28066843

  20. A Temporal Predictive Code for Voice Motor Control: Evidence from ERP and Behavioral Responses to Pitch-shifted Auditory Feedback

    PubMed Central

    Behroozmand, Roozbeh; Sangtian, Stacey; Korzyukov, Oleg; Larson, Charles R.

    2016-01-01

    The predictive coding model suggests that voice motor control is regulated by a process in which the mismatch (error) between feedforward predictions and sensory feedback is detected and used to correct vocal motor behavior. In this study, we investigated how predictions about timing of pitch perturbations in voice auditory feedback would modulate ERP and behavioral responses during vocal production. We designed six counterbalanced blocks in which a +100 cents pitch-shift stimulus perturbed voice auditory feedback during vowel sound vocalizations. In three blocks, there was a fixed delay (500, 750 or 1000 ms) between voice and pitch-shift stimulus onset (predictable), whereas in the other three blocks, stimulus onset delay was randomized between 500, 750 and 1000 ms (unpredictable). We found that subjects produced compensatory (opposing) vocal responses that started at 80 ms after the onset of the unpredictable stimuli. However, for predictable stimuli, subjects initiated vocal responses at 20 ms before and followed the direction of pitch shifts in voice feedback. Analysis of ERPs showed that the amplitudes of the N1 and P2 components were significantly reduced in response to predictable compared with unpredictable stimuli. These findings indicate that predictions about temporal features of sensory feedback can modulate vocal motor behavior. In the context of the predictive coding model, temporally-predictable stimuli are learned and reinforced by the internal feedforward system, and as indexed by the ERP suppression, the sensory feedback contribution is reduced for their processing. These findings provide new insights into the neural mechanisms of vocal production and motor control. PMID:26835556

  1. A temporal predictive code for voice motor control: Evidence from ERP and behavioral responses to pitch-shifted auditory feedback.

    PubMed

    Behroozmand, Roozbeh; Sangtian, Stacey; Korzyukov, Oleg; Larson, Charles R

    2016-04-01

    The predictive coding model suggests that voice motor control is regulated by a process in which the mismatch (error) between feedforward predictions and sensory feedback is detected and used to correct vocal motor behavior. In this study, we investigated how predictions about timing of pitch perturbations in voice auditory feedback would modulate ERP and behavioral responses during vocal production. We designed six counterbalanced blocks in which a +100 cents pitch-shift stimulus perturbed voice auditory feedback during vowel sound vocalizations. In three blocks, there was a fixed delay (500, 750 or 1000 ms) between voice and pitch-shift stimulus onset (predictable), whereas in the other three blocks, stimulus onset delay was randomized between 500, 750 and 1000 ms (unpredictable). We found that subjects produced compensatory (opposing) vocal responses that started at 80 ms after the onset of the unpredictable stimuli. However, for predictable stimuli, subjects initiated vocal responses at 20 ms before and followed the direction of pitch shifts in voice feedback. Analysis of ERPs showed that the amplitudes of the N1 and P2 components were significantly reduced in response to predictable compared with unpredictable stimuli. These findings indicate that predictions about temporal features of sensory feedback can modulate vocal motor behavior. In the context of the predictive coding model, temporally-predictable stimuli are learned and reinforced by the internal feedforward system, and as indexed by the ERP suppression, the sensory feedback contribution is reduced for their processing. These findings provide new insights into the neural mechanisms of vocal production and motor control.

  2. A Comparison of the Predictive Capabilities of Several Turbulence Models using Upwind and Central-Difference Computer Codes

    NASA Technical Reports Server (NTRS)

    Rumsey, Christopher L.; Vatsa, Veer N.

    1993-01-01

    Four turbulence models are described and evaluated for transonic flows using the upwind code CFL3D and the central-difference code TLNS3D. In particular, the effects of recent modifications to the half-equation model of Johnson-King are explored in detail, and different versions of the model are compared. This model can obtain good results for both two-dimensional (2D) and three-dimensional (3D) separated flows. The one-equation models of Baldwin-Barth and Spalart-Allmaras perform well for separated airfoil flows, but can predict the shock too far forward at the outboard stations of a separated wing. The equilibrium model of Baldwin-Lomax predicts the shock location too far aft for both 2D and 3D separated flows, as expected. In general, all models perform well for attached or mildly separated flows.

  3. A comparison of the predictive capabilities of several turbulence models using upwind and central-difference computer codes

    NASA Technical Reports Server (NTRS)

    Rumsey, Christopher L.; Vatsa, Veer N.

    1993-01-01

    Four turbulence models are described and evaluated for transonic flows using the upwind code CFL3D and the central-difference code TLNS3D. In particular, the effects of recent modifications to the half-equation model of Johnson-King are explored in detail, and different versions of the model are compared. This model can obtain good results for both two-dimensional (2D) and three-dimensional (3D) separated flows. The one-equation models of Baldwin-Barth and Spalart-Allmaras perform well for separated airfoil flows, but can predict the shock too far forward at the outboard stations of a separated wing. The equilibrium model of Baldwin-Lomax predicts the shock location too far aft for both 2D and 3D separated flows, as expected. In general, all models perform well for attached or mildly separated flows.

  4. Prediction accuracy in estimating joint angle trajectories using a video posture coding method for sagittal lifting tasks.

    PubMed

    Chang, Chien-Chi; McGorry, Raymond W; Lin, Jia-Hua; Xu, Xu; Hsiang, Simon M

    2010-08-01

    This study investigated prediction accuracy of a video posture coding method for lifting joint trajectory estimation. From three filming angles, the coder selected four key snapshots, identified joint angles and then a prediction program estimated the joint trajectories over the course of a lift. Results revealed a limited range of differences of joint angles (elbow, shoulder, hip, knee, ankle) between the manual coding method and the electromagnetic motion tracking system approach. Lifting range significantly affected estimate accuracy for all joints and camcorder filming angle had a significant effect on all joints but the hip. Joint trajectory predictions were more accurate for knuckle-to-shoulder lifts than for floor-to-shoulder or floor-to-knuckle lifts with average root mean square errors (RMSE) of 8.65 degrees , 11.15 degrees and 11.93 degrees , respectively. Accuracy was also greater for the filming angles orthogonal to the participant's sagittal plane (RMSE = 9.97 degrees ) as compared to filming angles of 45 degrees (RMSE = 11.01 degrees ) or 135 degrees (10.71 degrees ). The effects of lifting speed and loading conditions were minimal. To further increase prediction accuracy, improved prediction algorithms and/or better posture matching methods should be investigated. STATEMENT OF RELEVANCE: Observation and classification of postures are common steps in risk assessment of manual materials handling tasks. The ability to accurately predict lifting patterns through video coding can provide ergonomists with greater resolution in characterising or assessing the lifting tasks than evaluation based solely on sampling with a single lifting posture event.

  5. Development of a Mathematical Code to Predict Thermal Degradation of Fuel and Deposit Formation in a Fuel System

    DTIC Science & Technology

    1990-09-01

    MDTCAP 5,7 7 0A DCLML",," pROCESSING SHEIET srx is 5X.!iiACSTD AD- A225 415 WRDC-TR-90-2084 DEVELOPMENT OF A MATHEMATICAL CODE TO PREDICT THERMAL...R. (1983) "Studies of the Mechanism of Turbine Fuel Instability," Colorado School of Mines, NASA CR -167963. Daniel, S. R. (1985) "Jet Fuel Instability

  6. Predictive Calculation of Neutral Beam Heating Plasmas in EAST Tokamak by NUBEAM Code for Certain Parameter Ranges

    NASA Astrophysics Data System (ADS)

    Ni, Qionglin; Fan, Tieshuan; Zhang, Xing; Zhang, Cheng; Ren, Qilong; Hu, Chundong

    2010-12-01

    A predictive calculation is carried out for neutral beam heating of fusion plasmas in EAST by using NUBEAM code under certain plasma conditions. Results calculated are analyzed for different plasma parameters. Relations between major plasma parameters, such as density and temperature, are obtained and key physical processes in the neutral beam heating, including beam power deposition, trapped fraction, heating efficiency, and power loss, are simulated. Other physical processes, such as current-drive, toroidal rotation and neutron emission, are also discussed.

  7. The expression level of small non-coding RNAs derived from the first exon of protein-coding genes is predictive of cancer status.

    PubMed

    Zovoilis, Athanasios; Mungall, Andrew J; Moore, Richard; Varhol, Richard; Chu, Andy; Wong, Tina; Marra, Marco; Jones, Steven J M

    2014-04-01

    Small non-coding RNAs (smRNAs) are known to be significantly enriched near the transcriptional start sites of genes. However, the functional relevance of these smRNAs remains unclear, and they have not been associated with human disease. Within the cancer genome atlas project (TCGA), we have generated small RNA datasets for many tumor types. In prior cancer studies, these RNAs have been regarded as transcriptional "noise," due to their apparent chaotic distribution. In contrast, we demonstrate their striking potential to distinguish efficiently between cancer and normal tissues and classify patients with cancer to subgroups of distinct survival outcomes. This potential to predict cancer status is restricted to a subset of these smRNAs, which is encoded within the first exon of genes, highly enriched within CpG islands and negatively correlated with DNA methylation levels. Thus, our data show that genome-wide changes in the expression levels of small non-coding RNAs within first exons are associated with cancer.

  8. Code requirements document: MODFLOW 2. 1: A program for predicting moderator flow patterns

    SciTech Connect

    Peterson, P.F. . Dept. of Nuclear Engineering); Paik, I.K. )

    1992-03-01

    Sudden changes in the temperature of flowing liquids can result in transient buoyancy forces which strongly impact the flow hydrodynamics via flow stratification. These effects have been studied for the case of potential flow of stratified liquids to line sinks, but not for moderator flow in SRS reactors. Standard codes, such as TRAC and COMMIX, do not have the capability to capture the stratification effect, due to strong numerical diffusion which smears away the hot/cold fluid interface. A related problem with standard codes is the inability to track plumes injected into the liquid flow, again due to numerical diffusion. The combined effects of buoyant stratification and plume dispersion have been identified as being important in operation of the Supplementary Safety System which injects neutron-poison ink into SRS reactors to provide safe shutdown in the event of safety rod failure. The MODFLOW code discussed here provides transient moderator flow pattern information with stratification effects, and tracks the location of ink plumes in the reactor. The code, written in Fortran, is compiled for Macintosh II computers, and includes subroutines for interactive control and graphical output. Removing the graphics capabilities, the code can also be compiled on other computers. With graphics, in addition to the capability to perform safety related computations, MODFLOW also provides an easy tool for becoming familiar with flow distributions in SRS reactors.

  9. Code requirements document: MODFLOW 2.1: A program for predicting moderator flow patterns

    SciTech Connect

    Peterson, P.F.; Paik, I.K.

    1992-03-01

    Sudden changes in the temperature of flowing liquids can result in transient buoyancy forces which strongly impact the flow hydrodynamics via flow stratification. These effects have been studied for the case of potential flow of stratified liquids to line sinks, but not for moderator flow in SRS reactors. Standard codes, such as TRAC and COMMIX, do not have the capability to capture the stratification effect, due to strong numerical diffusion which smears away the hot/cold fluid interface. A related problem with standard codes is the inability to track plumes injected into the liquid flow, again due to numerical diffusion. The combined effects of buoyant stratification and plume dispersion have been identified as being important in operation of the Supplementary Safety System which injects neutron-poison ink into SRS reactors to provide safe shutdown in the event of safety rod failure. The MODFLOW code discussed here provides transient moderator flow pattern information with stratification effects, and tracks the location of ink plumes in the reactor. The code, written in Fortran, is compiled for Macintosh II computers, and includes subroutines for interactive control and graphical output. Removing the graphics capabilities, the code can also be compiled on other computers. With graphics, in addition to the capability to perform safety related computations, MODFLOW also provides an easy tool for becoming familiar with flow distributions in SRS reactors.

  10. Thermal treatments of foods: a predictive general-purpose code for heat and mass transfer

    NASA Astrophysics Data System (ADS)

    Barba, Anna Angela

    2005-05-01

    Thermal treatments of foods required accurate processing protocols. In this context, mathematical modeling of heat and mass transfer can play an important role in the control and definition of the process parameters as well as to design processing systems. In this work a code able to simulate heat and mass transfer phenomena within solid bodies has been developed. The code has been written with the ability of describing different geometries and it can account for any kind of different initial/boundary conditions. Transport phenomena within multi-layer bodies can be described, and time/position dependent material parameters can be implemented. Finally, the code has been validated by comparison with a problem for which the analytical solution is known, and by comparison with a differential scanning calorimetry signal that described the heating treatment of a raw potato (Solanum tuberosum).

  11. ICEG2D (v2.0) - An Integrated Software Package for Automated Prediction of Flow Fields for Single-Element Airfoils With Ice Accretion

    NASA Technical Reports Server (NTRS)

    Thompson David S.; Soni, Bharat K.

    2001-01-01

    An integrated geometry/grid/simulation software package, ICEG2D, is being developed to automate computational fluid dynamics (CFD) simulations for single- and multi-element airfoils with ice accretions. The current version, ICEG213 (v2.0), was designed to automatically perform four primary functions: (1) generate a grid-ready surface definition based on the geometrical characteristics of the iced airfoil surface, (2) generate high-quality structured and generalized grids starting from a defined surface definition, (3) generate the input and restart files needed to run the structured grid CFD solver NPARC or the generalized grid CFD solver HYBFL2D, and (4) using the flow solutions, generate solution-adaptive grids. ICEG2D (v2.0) can be operated in either a batch mode using a script file or in an interactive mode by entering directives from a command line within a Unix shell. This report summarizes activities completed in the first two years of a three-year research and development program to address automation issues related to CFD simulations for airfoils with ice accretions. As well as describing the technology employed in the software, this document serves as a users manual providing installation and operating instructions. An evaluation of the software is also presented.

  12. Accretion disks in Algols: Progenitors and evolution

    NASA Astrophysics Data System (ADS)

    Van Rensbergen, W.; De Greve, J. P.

    2016-08-01

    Context. There are only a few Algols with measured accretion disk parameters. These measurements provide additional constraints for tracing the origin of individual systems, narrowing down the initial parameter space. Aims: We investigate the origin and evolution of six Algol systems with accretion disks to find the initial parameters and evolutionary constraints for them. Methods: With a modified binary evolution code, series of close binary evolution are calculated to obtain the best match for observed individual systems. Results: Initial parameters for six Algol systems with accretion disks were determined matching both the present system parameters and the observed disk characteristics. Conclusions: When Roche lobe overflow (RLOF) starts during core hydrogen burning of the donor, the disk lifetime was found to be short. The disk luminosity is comparable to the luminosity of the gainer during a large fraction of the disk lifetime.

  13. Validation of the ASSERT subchannel code: Prediction of critical heat flux in standard and nonstandard CANDU bundle geometries

    SciTech Connect

    Carver, M.B.; Kiteley, J.C.; Zhou, R.Q.N.; Junop, S.V.; Rowe, D.S.

    1995-12-01

    The ASSERT code has been developed to address the three-dimensional computation of flow and phase distribution and fuel element surface temperatures within the horizontal subchannels of Canada uranium deuterium (CANDU) pressurized heavy water reactor fuel channels and to provide a detailed prediction of critical heat flux (CHF) distribution throughout the bundle. The ASSERT subchannel code has been validated extensively against a wide repertoire of experiments; its combination of three-dimensional prediction of local flow conditions with a comprehensive method of predicting CHF at these local conditions makes it a unique tool for predicting CHF for situations outside the existing experimental database. In particular, ASSERT is an appropriate tool to systematically investigate CHF under conditions of local geometric variations, such as pressure tube creep and fuel element strain. The numerical methodology used in ASSERT, the constitutive relationships incorporated, and the CHF assessment methodology are discussed. The evolutionary validation plan is also discussed and early validation exercises are summarized. More recent validation exercises in standard and nonstandard geometries are emphasized.

  14. Connectivity Reveals Sources of Predictive Coding Signals in Early Visual Cortex During Processing of Visual Optic Flow.

    PubMed

    Schindler, Andreas; Bartels, Andreas

    2016-05-24

    Superimposed on the visual feed-forward pathway, feedback connections convey higher level information to cortical areas lower in the hierarchy. A prominent framework for these connections is the theory of predictive coding where high-level areas send stimulus interpretations to lower level areas that compare them with sensory input. Along these lines, a growing body of neuroimaging studies shows that predictable stimuli lead to reduced blood oxygen level-dependent (BOLD) responses compared with matched nonpredictable counterparts, especially in early visual cortex (EVC) including areas V1-V3. The sources of these modulatory feedback signals are largely unknown. Here, we re-examined the robust finding of relative BOLD suppression in EVC evident during processing of coherent compared with random motion. Using functional connectivity analysis, we show an optic flow-dependent increase of functional connectivity between BOLD suppressed EVC and a network of visual motion areas including MST, V3A, V6, the cingulate sulcus visual area (CSv), and precuneus (Pc). Connectivity decreased between EVC and 2 areas known to encode heading direction: entorhinal cortex (EC) and retrosplenial cortex (RSC). Our results provide first evidence that BOLD suppression in EVC for predictable stimuli is indeed mediated by specific high-level areas, in accord with the theory of predictive coding.

  15. A new code for predicting the thermo-mechanical and irradiation behavior of metallic fuels in sodium fast reactors

    NASA Astrophysics Data System (ADS)

    Karahan, Aydın; Buongiorno, Jacopo

    2010-01-01

    An engineering code to predict the irradiation behavior of U-Zr and U-Pu-Zr metallic alloy fuel pins and UO2-PuO2 mixed oxide fuel pins in sodium-cooled fast reactors was developed. The code was named Fuel Engineering and Structural analysis Tool (FEAST). FEAST has several modules working in coupled form with an explicit numerical algorithm. These modules describe fission gas release and fuel swelling, fuel chemistry and restructuring, temperature distribution, fuel-clad chemical interaction, and fuel and clad mechanical analysis including transient creep-fracture for the clad. Given the fuel pin geometry, composition and irradiation history, FEAST can analyze fuel and clad thermo-mechanical behavior at both steady-state and design-basis (non-disruptive) transient scenarios. FEAST was written in FORTRAN-90 and has a simple input file similar to that of the LWR fuel code FRAPCON. The metal-fuel version is called FEAST-METAL, and is described in this paper. The oxide-fuel version, FEAST-OXIDE is described in a companion paper. With respect to the old Argonne National Laboratory code LIFE-METAL and other same-generation codes, FEAST-METAL emphasizes more mechanistic, less empirical models, whenever available. Specifically, fission gas release and swelling are modeled with the GRSIS algorithm, which is based on detailed tracking of fission gas bubbles within the metal fuel. Migration of the fuel constituents is modeled by means of thermo-transport theory. Fuel-clad chemical interaction models based on precipitation kinetics were developed for steady-state operation and transients. Finally, a transient intergranular creep-fracture model for the clad, which tracks the nucleation and growth of the cavities at the grain boundaries, was developed for and implemented in the code. Reducing the empiricism in the constitutive models should make it more acceptable to extrapolate FEAST-METAL to new fuel compositions and higher burnup, as envisioned in advanced sodium reactors

  16. Prediction of dryout performance for boiling water reactor fuel assemblies based on subchannel analysis with the RINGS code

    SciTech Connect

    Knabe, P.; Wehle, F.

    1995-12-01

    A fuel assembly with a large critical power margin introduces flexibility into reload fuel management. Therefore, optimization of the bundle and spacer geometry to maximize the bundle critical power is an important design objective. With a view to reducing the extent of the complex full-scale tests usually carried out to determine the thermal-hydraulic characteristics of various assembly geometries, the subchannel analysis method was further developed with the Siemens RINGS code. The annular flow code predicts dryout power and dryout location by calculating the conditions at which the liquid film flow rate is reduced to zero, allowing for evaporation, droplet entrainment, and droplet deposition. Appropriate attention is paid to the modeling of spacer effects. Comparison with experimental data of 3 x 3 and 4 x 4 tests shows the capability of RINGS to predict the flow quality and mass flux in subchannels under typical boiling water reactor operating conditions. By using the RINGS code, experimental critical power data for 3 x 3, 4 x 4, 5 x 5, 7 x 7, 8 x 8, 9 x 9, and 10 x 10 fuel assemblies were successfully postcalculated.

  17. Lifting scheme-based method for joint coding 3D stereo digital cinema with luminace correction and optimized prediction

    NASA Astrophysics Data System (ADS)

    Darazi, R.; Gouze, A.; Macq, B.

    2009-01-01

    Reproducing a natural and real scene as we see in the real world everyday is becoming more and more popular. Stereoscopic and multi-view techniques are used for this end. However due to the fact that more information are displayed requires supporting technologies such as digital compression to ensure the storage and transmission of the sequences. In this paper, a new scheme for stereo image coding is proposed. The original left and right images are jointly coded. The main idea is to optimally exploit the existing correlation between the two images. This is done by the design of an efficient transform that reduces the existing redundancy in the stereo image pair. This approach was inspired by Lifting Scheme (LS). The novelty in our work is that the prediction step is been replaced by an hybrid step that consists in disparity compensation followed by luminance correction and an optimized prediction step. The proposed scheme can be used for lossless and for lossy coding. Experimental results show improvement in terms of performance and complexity compared to recently proposed methods.

  18. Lossless image compression based on optimal prediction, adaptive lifting, and conditional arithmetic coding.

    PubMed

    Boulgouris, N V; Tzovaras, D; Strintzis, M G

    2001-01-01

    The optimal predictors of a lifting scheme in the general n-dimensional case are obtained and applied for the lossless compression of still images using first quincunx sampling and then simple row-column sampling. In each case, the efficiency of the linear predictors is enhanced nonlinearly. Directional postprocessing is used in the quincunx case, and adaptive-length postprocessing in the row-column case. Both methods are seen to perform well. The resulting nonlinear interpolation schemes achieve extremely efficient image decorrelation. We further investigate context modeling and adaptive arithmetic coding of wavelet coefficients in a lossless compression framework. Special attention is given to the modeling contexts and the adaptation of the arithmetic coder to the actual data. Experimental evaluation shows that the best of the resulting coders produces better results than other known algorithms for multiresolution-based lossless image coding.

  19. A general code to predict the drug release kinetics from different shaped matrices.

    PubMed

    Barba, Anna Angela; d'Amore, Matteo; Chirico, Serafina; Lamberti, Gaetano; Titomanlio, Giuseppe

    2009-02-15

    This work deals with the modeling of drug release from solid pharmaceutical systems (matrices) for oral delivery. The attention was paid to the behavior of matrices made of hydrogels and drug, and the modeling was devoted to reproduce all the relevant phenomena (water up-take, gel swelling, diffusivity increase, drug diffusion and polymer erosion). Thus, the transient mass balances (for both drug and water), with the proper initial and boundary conditions were written, and a generalized numerical code was formulated; it is able to describe several geometries (slab, sphere, infinite and finite cylinders; this latter was done by an approximation which reduces the 2D problem to an 1D scheme). The main phenomena observed in drug delivery from hydrogel-based matrix, i.e. polymer swelling and erosion, were taken into account. The code was validated by comparison with analytical solutions, available for some simplified situation, and then it was tested with some experimental data taken from literature.

  20. APPLYING SPARSE CODING TO SURFACE MULTIVARIATE TENSOR-BASED MORPHOMETRY TO PREDICT FUTURE COGNITIVE DECLINE

    PubMed Central

    Zhang, Jie; Stonnington, Cynthia; Li, Qingyang; Shi, Jie; Bauer, Robert J.; Gutman, Boris A.; Chen, Kewei; Reiman, Eric M.; Thompson, Paul M.; Ye, Jieping; Wang, Yalin

    2016-01-01

    Alzheimer’s disease (AD) is a progressive brain disease. Accurate diagnosis of AD and its prodromal stage, mild cognitive impairment, is crucial for clinical trial design. There is also growing interests in identifying brain imaging biomarkers that help evaluate AD risk presymptomatically. Here, we applied a recently developed multivariate tensor-based morphometry (mTBM) method to extract features from hippocampal surfaces, derived from anatomical brain MRI. For such surface-based features, the feature dimension is usually much larger than the number of subjects. We used dictionary learning and sparse coding to effectively reduce the feature dimensions. With the new features, an Adaboost classifier was employed for binary group classification. In tests on publicly available data from the Alzheimers Disease Neuroimaging Initiative, the new framework outperformed several standard imaging measures in classifying different stages of AD. The new approach combines the efficiency of sparse coding with the sensitivity of surface mTBM, and boosts classification performance. PMID:27499829

  1. WINCOF-I code for prediction of fan compressor unit with water ingestion

    NASA Technical Reports Server (NTRS)

    Murthy, S. N. B.; Mullican, A.

    1990-01-01

    The PURDUE-WINCOF code, which provides a numerical method of obtaining the performance of a fan-compressor unit of a jet engine with water ingestion into the inlet, was modified to take into account: (1) the scoop factor, (2) the time required for the setting-in of a quasi-steady distribution of water, and (3) the heat and mass transfer processes over the time calculated under 2. The modified code, named WINCOF-I was utilized to obtain the performance of a fan-compressor unit of a generic jet engine. The results illustrate the manner in which quasi-equilibrium conditions become established in the machine and the redistribution of ingested water in various stages in the form of a film out of the casing wall, droplets across the span, and vapor due to mass transfer.

  2. RCS Predictions From a Method of Moments and a Finite-Element Code for Several Targets

    DTIC Science & Technology

    2010-07-01

    01803 14. ABSTRACT This report presents results of radar cross section (RCS) calculations for several interesting targets using a method-of-moments...TERMS radar cross section, method of moments, finite element, modeling 16. SECURITY CLASSIFICATION OF: 17. LIMITATION OF ABSTRACT UU 18... radar cross section (RCS) simulation that require an exact code for solution. In this report, we compare RCS calculations with two very different

  3. Flexible Radiation Codes for Numerical Weather Prediction Across Space and Time Scales

    DTIC Science & Technology

    2013-09-30

    time and space scales, especially from regional models to global models. OBJECTIVES We are adapting radiation codes developed for climate ...PSrad is now complete, thorougly tested and debugged, is functioning as the radiation scheme in the climate model ECHAM 6.2 developed at the Max Planck...statiically significant change at most stations, indicating that errors in most places are not primarily driven by radiation errors. We are working

  4. Predictive Fallout Composition Modeling: Improvements and Applications of the Defense Land Fallout Interpretive Code

    SciTech Connect

    Hooper, David A; Jodoin, Vincent J; Lee, Ronald W; Monterial, Mateusz

    2012-01-01

    This paper outlines several improvements to the Particle Activity Module of the Defense Land Fallout Interpretive Code (DELFIC). The modeling of each phase of the fallout process is discussed within DELFIC to demonstrate the capabilities and limitations with the code for modeling and simulation. Expansion of the DELFIC isotopic library to include actinides and light elements is shown. Several key features of the new library are demonstrated, including compliance with ENDF/B-VII standards, augmentation of hardwired activated soil and actinide decay calculations with exact Bateman calculations, and full physical and chemical fractionation of all material inventories. Improvements to the radionuclide source term are demonstrated, including the ability to specify heterogeneous fission types and the ability to import source terms from irradiation calculations using the Oak Ridge Isotope Generation (ORIGEN) code. Additionally, the dose, kerma, and effective dose conversion factors are revised. Finally, the application of DELFIC for consequence management planning and forensic analysis is presented. For consequence management, DELFIC is shown to provide disaster recovery teams with simulations of real-time events, including the location, composition, time of arrival, activity rates, and dose rates of fallout, accounting for site-specific atmospheric effects. The results from DELFIC are also demonstrated for use by nuclear forensics teams to plan collection routes (including the determination of optimal collection locations), estimate dose rates to collectors, and anticipate the composition of material at collection sites. These capabilities give mission planners the ability to maximize their effectiveness in the field while minimizing risk to their collectors.

  5. GeneValidator: identify problems with protein-coding gene predictions

    PubMed Central

    Drăgan, Monica-Andreea; Moghul, Ismail; Priyam, Anurag; Bustos, Claudio; Wurm, Yannick

    2016-01-01

    Summary: Genomes of emerging model organisms are now being sequenced at very low cost. However, obtaining accurate gene predictions remains challenging: even the best gene prediction algorithms make substantial errors and can jeopardize subsequent analyses. Therefore, many predicted genes must be time-consumingly visually inspected and manually curated. We developed GeneValidator (GV) to automatically identify problematic gene predictions and to aid manual curation. For each gene, GV performs multiple analyses based on comparisons to gene sequences from large databases. The resulting report identifies problematic gene predictions and includes extensive statistics and graphs for each prediction to guide manual curation efforts. GV thus accelerates and enhances the work of biocurators and researchers who need accurate gene predictions from newly sequenced genomes. Availability and implementation: GV can be used through a web interface or in the command-line. GV is open-source (AGPL), available at https://wurmlab.github.io/tools/genevalidator. Contact: y.wurm@qmul.ac.uk Supplementary information: Supplementary data are available at Bioinformatics online. PMID:26787666

  6. Improved NASA-ANOPP Noise Prediction Computer Code for Advanced Subsonic Propulsion Systems

    NASA Technical Reports Server (NTRS)

    Kontos, K. B.; Janardan, B. A.; Gliebe, P. R.

    1996-01-01

    Recent experience using ANOPP to predict turbofan engine flyover noise suggests that it over-predicts overall EPNL by a significant amount. An improvement in this prediction method is desired for system optimization and assessment studies of advanced UHB engines. An assessment of the ANOPP fan inlet, fan exhaust, jet, combustor, and turbine noise prediction methods is made using static engine component noise data from the CF6-8OC2, E(3), and QCSEE turbofan engines. It is shown that the ANOPP prediction results are generally higher than the measured GE data, and that the inlet noise prediction method (Heidmann method) is the most significant source of this overprediction. Fan noise spectral comparisons show that improvements to the fan tone, broadband, and combination tone noise models are required to yield results that more closely simulate the GE data. Suggested changes that yield improved fan noise predictions but preserve the Heidmann model structure are identified and described. These changes are based on the sets of engine data mentioned, as well as some CFM56 engine data that was used to expand the combination tone noise database. It should be noted that the recommended changes are based on an analysis of engines that are limited to single stage fans with design tip relative Mach numbers greater than one.

  7. Planetary migration, accretion, and atmospheres

    NASA Astrophysics Data System (ADS)

    Dobbs-Dixon, Ian M.

    This dissertation explores three distinct projects in the field of planetary formation and evolution: type I migration, cessation of mass accretion, and the atmospheric dynamics of hot Jupiters. All three of these projects touch on outstanding or unresolved issues in the field. Each attempts to unify analytic and numerical approaches in order to physically motivate solutions while simultaneously probing areas currently inaccessible to purely analytic approaches. The first section, type I migration, explores the outstanding problem of the rapid inward migration of low mass planets embedded in protoplanetary disks. Analytic estimates of migration predict characteristic timescales that are much shorter then either observed disk lifetimes or theoretical core-accretion formation timescales. If migration is actually as efficient as these analytic estimates predict, planet formation across the observed range of masses and semimajor axis' is difficult. Here I introduce several new formalisms to both allow the disk to adiabatically adjust to the presence of a planet and include the effect of axisymmetric disk self-gravity. I find that these modifications increase migration timescales by approximately 4 times. In addition to these numerical improvements, I present simulations of migration in lower sound-speed regions of the disk on the grounds that self shadowing within the disk could yield substantially cooler gas temperatures then those derived by most irradiated disk models. In such regions the planetary perturbation excites a secondary instability, leading to the formation of vortices. These vortices cause a substantial reduction in the net torque, increasing migration timescales by up to approximately 200 times the analytically predicted rate. The second section addresses the mechanism for shutting off accretion onto giant planets. According to the conventional sequential accretion scenario, giant planets acquire a majority of their gas in a runaway phase. Conventional

  8. A NEW SEMI-EMPIRICAL AMBIENT TO EFFECTIVE DOSE CONVERSION MODEL FOR THE PREDICTIVE CODE FOR AIRCREW RADIATION EXPOSURE (PCAIRE).

    PubMed

    Dumouchel, T; McCall, M; Lemay, F; Bennett, L; Lewis, B; Bean, M

    2016-12-01

    The Predictive Code for Aircrew Radiation Exposure (PCAIRE) is a semi-empirical code that estimates both ambient dose equivalent, based on years of on-board measurements, and effective dose to aircrew. Currently, PCAIRE estimates effective dose by converting the ambient dose equivalent to effective dose (E/H) using a model that is based on radiation transport calculations and on the radiation weighting factors recommended in International Commission on Radiological Protection (ICRP) 60. In this study, a new semi-empirical E/H model is proposed to replace the existing transport calculation models. The new model is based on flight data measured using a tissue-equivalent proportional counter (TEPC). The measured flight TEPC data are separated into a low- and a high-lineal-energy spectrum using an amplitude-weighted (137)Cs TEPC spectrum. The high-lineal-energy spectrum is determined by subtracting the low-lineal-energy spectrum from the measured flight TEPC spectrum. With knowledge of E/H for the low- and high-lineal-energy spectra, the total E/H is estimated for a given flight altitude and geographic location. The semi-empirical E/H model also uses new radiation weighting factors to align the model with the most recent ICRP 103 recommendations. The ICRP 103-based semi-empirical effective dose model predicts that there is a ∼30 % reduction in dose in comparison with the ICRP 60-based model. Furthermore, the ambient dose equivalent is now a more conservative dose estimate for jet aircraft altitudes in the range of 7-13 km (FL230-430). This new semi-empirical E/H model is validated against E/H predicted from a Monte Carlo N-Particle transport code simulation of cosmic ray propagation through the Earth's atmosphere. Its implementation allows PCAIRE to provide an accurate semi-empirical estimate of the effective dose.

  9. Rime ice accretion and its effect on airfoil performance. Ph.D. Thesis. Final Report

    NASA Technical Reports Server (NTRS)

    Bragg, M. B.

    1982-01-01

    A methodology was developed to predict the growth of rime ice, and the resulting aerodynamic penalty on unprotected, subcritical, airfoil surfaces. The system of equations governing the trajectory of a water droplet in the airfoil flowfield is developed and a numerical solution is obtained to predict the mass flux of super cooled water droplets freezing on impact. A rime ice shape is predicted. The effect of time on the ice growth is modeled by a time-stepping procedure where the flowfield and droplet mass flux are updated periodically through the ice accretion process. Two similarity parameters, the trajectory similarity parameter and accumulation parameter, are found to govern the accretion of rime ice. In addition, an analytical solution is presented for Langmuir's classical modified inertia parameter. The aerodynamic evaluation of the effect of the ice accretion on airfoil performance is determined using an existing airfoil analysis code with empirical corrections. The change in maximum lift coefficient is found from an analysis of the new iced airfoil shape. The drag correction needed due to the severe surface roughness is formulated from existing iced airfoil and rough airfoil data. A small scale wind tunnel test was conducted to determine the change in airfoil performance due to a simulated rime ice shape.

  10. ACCRETION DISK TEMPERATURES OF QSOs: CONSTRAINTS FROM THE EMISSION LINES

    SciTech Connect

    Bonning, E. W.; Shields, G. A.; Stevens, A. C.; Salviander, S. E-mail: shields@astro.as.utexas.edu E-mail: triples@astro.as.utexas.edu

    2013-06-10

    We compare QSO emission-line spectra to predictions based on theoretical ionizing continua of accretion disks. The observed line intensities do not show the expected trend of higher ionization with theoretical accretion disk temperature as predicted from the black hole mass and accretion rate. Consistent with earlier studies, this suggests that the inner disk does not reach temperatures as high as expected from standard disk theory. Modified radial temperature profiles, taking account of winds or advection in the inner disk, achieve better agreement with observation. The emission lines of radio-detected and radio-undetected sources show different trends as a function of the theoretically predicted disk temperature.

  11. Small Engine Technology (SET) Task 23 ANOPP Noise Prediction for Small Engines, Wing Reflection Code

    NASA Technical Reports Server (NTRS)

    Lieber, Lysbeth; Brown, Daniel; Golub, Robert A. (Technical Monitor)

    2000-01-01

    The work performed under Task 23 consisted of the development and demonstration of improvements for the NASA Aircraft Noise Prediction Program (ANOPP), specifically targeted to the modeling of engine noise enhancement due to wing reflection. This report focuses on development of the model and procedure to predict the effects of wing reflection, and the demonstration of the procedure, using a representative wing/engine configuration.

  12. Issues in Automatic Object Recognition: Linking Geometry and Material Data to Predictive Signature Codes

    DTIC Science & Technology

    1991-03-01

    dirbuild() opens the databse -file and builds the in-core database table of contents. rt-gettree0 adds a database sub-tree to the active model space, and...and- Chemical 7.mmand ATTN: SMCAR-ESP-L I Dir, VLAMO Rock Island, IL 61299-5000 ATTN: AMSLC-VL-D Director 10 Dir, BRL U.S. Army Aviation Research ATTN...Center ATTN: Louis E. Smith ATTN: Dr. Paul C. St. Hilaire University Park -Code 1210 Denver, CO 80208 Bethesda, MD 20084-5000 1 Dow Chemical , U.S.A

  13. Monitoring Cosmic Radiation Risk: Comparisons between Observations and Predictive Codes for Naval Aviation

    DTIC Science & Technology

    2009-01-01

    various materials can be found by use of the SRIM code [17]. F. Pions/Muons The pion, originally referred to as the π meson , was one of the earliest...These are the lightest mesons and have a very short half- life. In atmospheric interactions, they help produce muons and neutrinos [17]. The π+ is...keV/micron High Varies Pions Mesons π0 π+ π- π+,- : +-e π0 : 0 ᝺ keV/micron Low π+,- : 2.6x10-8 π0 : 0.84x10-16 Muons Leptons μ- μ+ +1, -1 ᝺

  14. Monitoring Cosmic Radiation Risk: Comparisons Between Observations and Predictive Codes for Naval Aviation

    DTIC Science & Technology

    2009-07-05

    materials can be found by use of the SRIM code [17]. F. Pions/Muons The pion, originally referred to as the π meson , was one of the earliest...These are the lightest mesons and have a very short half- life. In atmospheric interactions, they help produce muons and neutrinos [17]. The π+ is...micron High Varies Pions Mesons π0 π+ π- π+,- : +-e π0 : 0 ᝺ keV/micron Low π+,- : 2.6x10-8 π0 : 0.84x10-16 Muons Leptons μ- μ+ +1, -1 ᝺ keV

  15. Multiphase, non-spherical gas accretion on to a black hole

    NASA Astrophysics Data System (ADS)

    Barai, Paramita; Proga, Daniel; Nagamine, Kentaro

    2012-07-01

    We investigate non-spherical behaviour of gas accreting on to a central supermassive black hole. Assuming optically thin conditions, we include radiative cooling and radiative heating by the central X-ray source. Our simulations are performed using the 3D smoothed particle hydrodynamic (SPH) code GADGET-3 and are compared to theoretical predictions as well as to 1D simulations performed using the grid code ZEUS. As found in earlier 1D studies, our 3D simulations show that the accretion mode depends on the X-ray luminosity (LX) for a fixed density at infinity and accretion efficiency. In the low LX limit, gas accretes in a stable, spherically symmetric fashion. In the high LX limit, the inner gas is significantly heated up and expands, reducing the central mass inflow rate. The expanding gas can turn into a strong enough outflow capable of expelling most of the gas at larger radii. For some intermediate LX, the accretion flow becomes unstable developing prominent non-spherical features. Our detailed analysis and tests show that the key reason for this unstable non-spherical nature of the flow is thermal instability (TI). Small perturbations of the initially spherically symmetric accretion flow that is heated by the intermediate LX quickly grow to form cold and dense clumps surrounded by overheated low-density regions. The cold clumps continue their inwards motion forming filamentary structures, while the hot infalling gas slows down because of buoyancy and can even start outflowing through the channels in between the filaments. We measured various local and global properties of our solutions. In particular, we found that the ratio between the mass inflow rates of the cold and hot gas is a dynamical quantity depending on several factors: time, spatial location and LX; and ranges between 0 and 4. We briefly discuss astrophysical implications of such TI-driven fragmentation of accreting gas on the formation of clouds in narrow- and broad-line regions of active galactic

  16. Expression Quantitative Trait Loci Information Improves Predictive Modeling of Disease Relevance of Non-Coding Genetic Variation

    PubMed Central

    Raj, Towfique; McGeachie, Michael J.; Qiu, Weiliang; Ziniti, John P.; Stubbs, Benjamin J.; Liang, Liming; Martinez, Fernando D.; Strunk, Robert C.; Lemanske, Robert F.; Liu, Andrew H.; Stranger, Barbara E.; Carey, Vincent J.; Raby, Benjamin A.

    2015-01-01

    Disease-associated loci identified through genome-wide association studies (GWAS) frequently localize to non-coding sequence. We and others have demonstrated strong enrichment of such single nucleotide polymorphisms (SNPs) for expression quantitative trait loci (eQTLs), supporting an important role for regulatory genetic variation in complex disease pathogenesis. Herein we describe our initial efforts to develop a predictive model of disease-associated variants leveraging eQTL information. We first catalogued cis-acting eQTLs (SNPs within 100kb of target gene transcripts) by meta-analyzing four studies of three blood-derived tissues (n = 586). At a false discovery rate < 5%, we mapped eQTLs for 6,535 genes; these were enriched for disease-associated genes (P < 10−04), particularly those related to immune diseases and metabolic traits. Based on eQTL information and other variant annotations (distance from target gene transcript, minor allele frequency, and chromatin state), we created multivariate logistic regression models to predict SNP membership in reported GWAS. The complete model revealed independent contributions of specific annotations as strong predictors, including evidence for an eQTL (odds ratio (OR) = 1.2–2.0, P < 10−11) and the chromatin states of active promoters, different classes of strong or weak enhancers, or transcriptionally active regions (OR = 1.5–2.3, P < 10−11). This complete prediction model including eQTL association information ultimately allowed for better discrimination of SNPs with higher probabilities of GWAS membership (6.3–10.0%, compared to 3.5% for a random SNP) than the other two models excluding eQTL information. This eQTL-based prediction model of disease relevance can help systematically prioritize non-coding GWAS SNPs for further functional characterization. PMID:26474488

  17. Predicting CYP2C19 catalytic parameters for enantioselective oxidations using artificial neural networks and a chirality code.

    PubMed

    Hartman, Jessica H; Cothren, Steven D; Park, Sun-Ha; Yun, Chul-Ho; Darsey, Jerry A; Miller, Grover P

    2013-07-01

    Cytochromes P450 (CYP for isoforms) play a central role in biological processes especially metabolism of chiral molecules; thus, development of computational methods to predict parameters for chiral reactions is important for advancing this field. In this study, we identified the most optimal artificial neural networks using conformation-independent chirality codes to predict CYP2C19 catalytic parameters for enantioselective reactions. Optimization of the neural networks required identifying the most suitable representation of structure among a diverse array of training substrates, normalizing distribution of the corresponding catalytic parameters (k(cat), K(m), and k(cat)/K(m)), and determining the best topology for networks to make predictions. Among different structural descriptors, the use of partial atomic charges according to the CHelpG scheme and inclusion of hydrogens yielded the most optimal artificial neural networks. Their training also required resolution of poorly distributed output catalytic parameters using a Box-Cox transformation. End point leave-one-out cross correlations of the best neural networks revealed that predictions for individual catalytic parameters (k(cat) and K(m)) were more consistent with experimental values than those for catalytic efficiency (k(cat)/K(m)). Lastly, neural networks predicted correctly enantioselectivity and comparable catalytic parameters measured in this study for previously uncharacterized CYP2C19 substrates, R- and S-propranolol. Taken together, these seminal computational studies for CYP2C19 are the first to predict all catalytic parameters for enantioselective reactions using artificial neural networks and thus provide a foundation for expanding the prediction of cytochrome P450 reactions to chiral drugs, pollutants, and other biologically active compounds.

  18. Revisiting the pre-main-sequence evolution of stars. I. Importance of accretion efficiency and deuterium abundance

    NASA Astrophysics Data System (ADS)

    Kunitomo, Masanobu; Guillot, Tristan; Takeuchi, Taku; Ida, Shigeru

    2017-02-01

    Context. Protostars grow from the first formation of a small seed and subsequent accretion of material. Recent theoretical work has shown that the pre-main-sequence (PMS) evolution of stars is much more complex than previously envisioned. Instead of the traditional steady, one-dimensional solution, accretion may be episodic and not necessarily symmetrical, thereby affecting the energy deposited inside the star and its interior structure. Aims: Given this new framework, we want to understand what controls the evolution of accreting stars. Methods: We use the MESA stellar evolution code with various sets of conditions. In particular, we account for the (unknown) efficiency of accretion in burying gravitational energy into the protostar through a parameter, ξ, and we vary the amount of deuterium present. Results: We confirm the findings of previous works that, in terms of evolutionary tracks on an Hertzprung-Russell (H-R) diagram, the evolution changes significantly with the amount of energy that is lost during accretion. We find that deuterium burning also regulates the PMS evolution. In the low-entropy accretion scenario, the evolutionary tracks in the H-R diagram are significantly different from the classical tracks and are sensitive to the deuterium content. A comparison of theoretical evolutionary tracks and observations allows us to exclude some cold accretion models (ξ 0) with low deuterium abundances. Conclusions: We confirm that the luminosity spread seen in clusters can be explained by models with a somewhat inefficient injection of accretion heat. The resulting evolutionary tracks then become sensitive to the accretion heat efficiency, initial core entropy, and deuterium content. In this context, we predict that clusters with a higher D/H ratio should have less scatter in luminosity than clusters with a smaller D/H. Future work on this issue should include radiation-hydrodynamic simulations to determine the efficiency of accretion heating and further

  19. lncRScan-SVM: A Tool for Predicting Long Non-Coding RNAs Using Support Vector Machine.

    PubMed

    Sun, Lei; Liu, Hui; Zhang, Lin; Meng, Jia

    2015-01-01

    Functional long non-coding RNAs (lncRNAs) have been bringing novel insight into biological study, however it is still not trivial to accurately distinguish the lncRNA transcripts (LNCTs) from the protein coding ones (PCTs). As various information and data about lncRNAs are preserved by previous studies, it is appealing to develop novel methods to identify the lncRNAs more accurately. Our method lncRScan-SVM aims at classifying PCTs and LNCTs using support vector machine (SVM). The gold-standard datasets for lncRScan-SVM model training, lncRNA prediction and method comparison were constructed according to the GENCODE gene annotations of human and mouse respectively. By integrating features derived from gene structure, transcript sequence, potential codon sequence and conservation, lncRScan-SVM outperforms other approaches, which is evaluated by several criteria such as sensitivity, specificity, accuracy, Matthews correlation coefficient (MCC) and area under curve (AUC). In addition, several known human lncRNA datasets were assessed using lncRScan-SVM. LncRScan-SVM is an efficient tool for predicting the lncRNAs, and it is quite useful for current lncRNA study.

  20. Computational prediction of over-annotated protein-coding genes in the genome of Agrobacterium tumefaciens strain C58

    NASA Astrophysics Data System (ADS)

    Yu, Jia-Feng; Sui, Tian-Xiang; Wang, Hong-Mei; Wang, Chun-Ling; Jing, Li; Wang, Ji-Hua

    2015-12-01

    Agrobacterium tumefaciens strain C58 is a type of pathogen that can cause tumors in some dicotyledonous plants. Ever since the genome of A. tumefaciens strain C58 was sequenced, the quality of annotation of its protein-coding genes has been queried continually, because the annotation varies greatly among different databases. In this paper, the questionable hypothetical genes were re-predicted by integrating the TN curve and Z curve methods. As a result, 30 genes originally annotated as “hypothetical” were discriminated as being non-coding sequences. By testing the re-prediction program 10 times on data sets composed of the function-known genes, the mean accuracy of 99.99% and mean Matthews correlation coefficient value of 0.9999 were obtained. Further sequence analysis and COG analysis showed that the re-annotation results were very reliable. This work can provide an efficient tool and data resources for future studies of A. tumefaciens strain C58. Project supported by the National Natural Science Foundation of China (Grant Nos. 61302186 and 61271378) and the Funding from the State Key Laboratory of Bioelectronics of Southeast University.

  1. Evaluation of MOSTAS computer code for predicting dynamic loads in two-bladed wind turbines

    NASA Technical Reports Server (NTRS)

    Kaza, K. R. V.; Janetzke, D. C.; Sullivan, T. L.

    1979-01-01

    Calculated dynamic blade loads are compared with measured loads over a range of yaw stiffnesses of the DOE/NASA Mod-0 wind turbine to evaluate the performance of two versions of the MOSTAS computer code. The first version uses a time-averaged coefficient approximation in conjunction with a multiblade coordinate transformation for two-bladed rotors to solve the equations of motion by standard eigenanalysis. The results obtained with this approximate analysis do not agree with dynamic blade load amplifications at or close to resonance conditions. The results of the second version, which accounts for periodic coefficients while solving the equations by a time history integration, compare well with the measured data.

  2. Evaluation of MOSTAS computer code for predicting dynamic loads in two bladed wind turbines

    NASA Technical Reports Server (NTRS)

    Kaza, K. R. V.; Janetzke, D. C.; Sullivan, T. L.

    1979-01-01

    Calculated dynamic blade loads were compared with measured loads over a range of yaw stiffnesses of the DOE/NASA Mod-O wind turbine to evaluate the performance of two versions of the MOSTAS computer code. The first version uses a time-averaged coefficient approximation in conjunction with a multi-blade coordinate transformation for two bladed rotors to solve the equations of motion by standard eigenanalysis. The second version accounts for periodic coefficients while solving the equations by a time history integration. A hypothetical three-degree of freedom dynamic model was investigated. The exact equations of motion of this model were solved using the Floquet-Lipunov method. The equations with time-averaged coefficients were solved by standard eigenanalysis.

  3. Non-coding RNAs in crop genetic modification: considerations and predictable environmental risk assessments (ERA).

    PubMed

    Ramesh, S V

    2013-09-01

    Of late non-coding RNAs (ncRNAs)-mediated gene silencing is an influential tool deliberately deployed to negatively regulate the expression of targeted genes. In addition to the widely employed small interfering RNA (siRNA)-mediated gene silencing approach, other variants like artificial miRNA (amiRNA), miRNA mimics, and artificial transacting siRNAs (tasiRNAs) are being explored and successfully deployed in developing non-coding RNA-based genetically modified plants. The ncRNA-based gene manipulations are typified with mobile nature of silencing signals, interference from viral genome-derived suppressor proteins, and an obligation for meticulous computational analysis to prevaricate any inadvertent effects. In a broad sense, risk assessment inquiries for genetically modified plants based on the expression of ncRNAs are competently addressed by the environmental risk assessment (ERA) models, currently in vogue, designed for the first generation transgenic plants which are based on the expression of heterologous proteins. Nevertheless, transgenic plants functioning on the foundation of ncRNAs warrant due attention with respect to their unique attributes like off-target or non-target gene silencing effects, small RNAs (sRNAs) persistence, food and feed safety assessments, problems in detection and tracking of sRNAs in food, impact of ncRNAs in plant protection measures, effect of mutations etc. The role of recent developments in sequencing techniques like next generation sequencing (NGS) and the ERA paradigm of the different countries in vogue are also discussed in the context of ncRNA-based gene manipulations.

  4. Computational Account of Spontaneous Activity as a Signature of Predictive Coding

    PubMed Central

    Koren, Veronika

    2017-01-01

    Spontaneous activity is commonly observed in a variety of cortical states. Experimental evidence suggested that neural assemblies undergo slow oscillations with Up ad Down states even when the network is isolated from the rest of the brain. Here we show that these spontaneous events can be generated by the recurrent connections within the network and understood as signatures of neural circuits that are correcting their internal representation. A noiseless spiking neural network can represent its input signals most accurately when excitatory and inhibitory currents are as strong and as tightly balanced as possible. However, in the presence of realistic neural noise and synaptic delays, this may result in prohibitively large spike counts. An optimal working regime can be found by considering terms that control firing rates in the objective function from which the network is derived and then minimizing simultaneously the coding error and the cost of neural activity. In biological terms, this is equivalent to tuning neural thresholds and after-spike hyperpolarization. In suboptimal working regimes, we observe spontaneous activity even in the absence of feed-forward inputs. In an all-to-all randomly connected network, the entire population is involved in Up states. In spatially organized networks with local connectivity, Up states spread through local connections between neurons of similar selectivity and take the form of a traveling wave. Up states are observed for a wide range of parameters and have similar statistical properties in both active and quiescent state. In the optimal working regime, Up states are vanishing, leaving place to asynchronous activity, suggesting that this working regime is a signature of maximally efficient coding. Although they result in a massive increase in the firing activity, the read-out of spontaneous Up states is in fact orthogonal to the stimulus representation, therefore interfering minimally with the network function. PMID:28114353

  5. Positive predictive value of ICD-9th codes for upper gastrointestinal bleeding and perforation in the Sistema Informativo Sanitario Regionale database.

    PubMed

    Cattaruzzi, C; Troncon, M G; Agostinis, L; García Rodríguez, L A

    1999-06-01

    We identified patients whose records in the Sistema Informativo Sanitario Regionale database in the Italian region of Friuli-Venezia Giulia showed a code of upper gastrointestinal bleeding (UGIB) and perforation according to codes of the International Classification of Diseases (ICD)-9th revision. The validity of site- and lesion-specific codes (531 to 534) and nonspecific codes (5780, 5781, and 5789) was ascertained through manual review of hospital clinical records. The initial group was made of 1779 potential cases of UGIB identified with one of these codes recorded. First, the positive predictive values (PPV) were calculated in a random sample. As a result of the observed high PPV of 531 and 532 codes, additional hospital charts were solely requested for all remaining potential cases with 533, 534, and 578 ICD-9 codes. The overall PPV reached a high of 97% for 531 and 532 site-specific codes, 84% for 534 site-specific codes, and 80% for 533 lesion-specific codes, and a low of 59% for nonspecific codes. These data suggest a considerable research potential for this new computerized health care database in Southern Europe.

  6. Spiral-driven accretion in protoplanetary discs . III. Tridimensional simulations

    NASA Astrophysics Data System (ADS)

    Hennebelle, Patrick; Lesur, Geoffroy; Fromang, Sébastien

    2017-03-01

    Context. Understanding how accretion proceeds in proto-planetary discs, and more generally, understanding their dynamics, is a crucial questions that needs to be answered to explain the conditions in which planets form. Aims: The role that accretion of gas from the surrounding molecular cloud onto the disc may have on its structure needs to be quantified. Methods: We performed tridimensional simulations using the Cartesian AMR code RAMSES of an accretion disc that is subject to infalling material. Results: For the aspect ratio of H/R ≃ 0.15 and disc mass Md ≃ 10-2M⊙ used in our study, we find that for typical accretion rates of the order of a few 10-7M⊙ yr-1, values of the α parameter as high as a few 10-3 are inferred. The mass that is accreted in the inner part of the disc is typically at least 50% of the total mass that has been accreted onto the disc. Conclusions: Our results suggest that external accretion of gas at moderate values onto circumstellar discs may trigger prominent spiral arms that are reminiscent of recent observations made with various instruments, and may lead to significant transport through the disc. If confirmed from observational studies, such accretion may therefore influence disc evolution.

  7. Ice Accretions on Modern Airfoils Investigated

    NASA Technical Reports Server (NTRS)

    Addy, Harold E., Jr.

    2000-01-01

    The Icing Branch at the NASA Glenn Research Center at Lewis Field initiated and conducted the Modern Airfoils Ice Accretions project to identify ice shapes and determine their effects on the aerodynamic performance of aircraft, particularly on lift and drag. Previous aircraft ice shape and performance documentation focused on a few, older airfoils. This permitted more basic studies of the ice accretion process to be undertaken. However, having established both a working data base of ice shapes and the capability to predict these shapes for basic airfoils, questions arose about how ice might accrete differently on airfoils more representative of those being designed and flown on various aircraft today. Similarly, information about how these ice shapes would affect aerodynamic performance was needed.

  8. Reverberation Mapping of AGN Accretion Disks

    NASA Astrophysics Data System (ADS)

    Fausnaugh, Michael; AGN STORM Collaboration

    2017-01-01

    I will discuss new reverberation mapping results that allow us to investigate the temperature structure of AGN accretion disks. By measuring time-delays between broad-band continuum light curves, we can determine the size of the disk as a function of wavelength. I will discuss the detection of continuum lags in NGC 5548 reported by the AGN STORM project and implications for the accretion disk. I will also present evidence for continuum lags in two other AGN for which we recently measured black hole masses from continuum-Hbeta reverberations. The mass measurements allow us to compare the continuum lags to predictions from standard thin disk theory, and our results indicate that the accretion disks are larger than the simplest expectations.

  9. Hybrid Numerical Simulations Of Planetesimal Accretion

    NASA Astrophysics Data System (ADS)

    Marzari, Francesco; Weidenschilling, S. J.

    2006-09-01

    The multi-zone simulation code modelling the accretion of planetesimals into planets (Spaute et al. 1991, Icarus 92, 147; Weidenschilling et al. 1997, ICARUS 128, 429) includes a statistical continuum of small bodies in logarithmic mass bins, while large bodies are discrete objects with individual masses and orbits. Formerly, gravitational interactions between large planetary embryos were treated by statistical scattering. The code has now been updated to properly handle the orbits of protoplanets in a deterministic way. The trajectories of the larger bodies are numerically computed with the symplectic integrator SyYMBA. The additional forces acting on the protoplanets due to collisions with smaller planetesimals and their gravitational perturbations, including dynamical friction, as well as gas drag and tidal interaction with the solar nebula, are incorporated in the N-body algorithm by applying a further step in the leap-frog structure of the SyMBA integrator. The changes in the orbital elements of the large bodies, computed in the stochastic part of the code with a Monte Carlo approach, are applied for half a timestep before and after the N-body Hamiltonian propagation as suggested in Lee & Peale (ApJ 567, 596, 2002). With this code we intend to study the effect of dynamical friction on terrestrial planet formation and the accretion of planetary cores in the outer solar system. We will present preliminary results of simulations performed with the updated code.

  10. Wind-US Code Contributions to the First AIAA Shock Boundary Layer Interaction Prediction Workshop

    NASA Technical Reports Server (NTRS)

    Georgiadis, Nicholas J.; Vyas, Manan A.; Yoder, Dennis A.

    2013-01-01

    This report discusses the computations of a set of shock wave/turbulent boundary layer interaction (SWTBLI) test cases using the Wind-US code, as part of the 2010 American Institute of Aeronautics and Astronautics (AIAA) shock/boundary layer interaction workshop. The experiments involve supersonic flows in wind tunnels with a shock generator that directs an oblique shock wave toward the boundary layer along one of the walls of the wind tunnel. The Wind-US calculations utilized structured grid computations performed in Reynolds-averaged Navier-Stokes mode. Four turbulence models were investigated: the Spalart-Allmaras one-equation model, the Menter Baseline and Shear Stress Transport k-omega two-equation models, and an explicit algebraic stress k-omega formulation. Effects of grid resolution and upwinding scheme were also considered. The results from the CFD calculations are compared to particle image velocimetry (PIV) data from the experiments. As expected, turbulence model effects dominated the accuracy of the solutions with upwinding scheme selection indicating minimal effects.

  11. Clump Accretion in Supergiant Fast X-Ray Transients

    NASA Astrophysics Data System (ADS)

    Chase, Eve; Raymer, E.; Blondin, J. M.

    2014-01-01

    Supergiant Fast X-Ray Transients (SFXTs) are a subclass of High-Mass X-Ray Binaries that consist of a neutron star and OB supergiant donor star. These systems display short, bright x-ray flares lasting a few minutes to a few hours with luminosities reaching 1036 erg/s, several orders of magnitude larger than the quiescent luminosities of 1032 erg/s. The clumpy wind hypothesis has been proposed as a possible mechanism for these transient flares; in this model, a portion of the stellar wind from the donor star forms into clumps and is accreted onto the neutron star, inducing flares. We use high-resolution 3D hydrodynamic simulations to test the clumpy wind hypothesis, tracking the mass and angular momentum accretion rates to infer properties of the resulting x-ray flare and secular evolution of the neutron star rotation. Our results are significantly different from the predictions of Hoyle-Lyttleton Accretion (HLA) theory, which assume steady, laminar, axisymmetric flow. For example, an off-axis clump initiated with an impact parameter greater than the clump radius (for which HLA predicts no effect) produces a small spike in mass accretion and induces a long period of disk-like flow that dramatically reduces the accretion rate below the steady HLA value. The result is a brief, weak flare with a net decrease in total accreted mass compared with steady wind accretion accompanied by a substantial accretion of angular momentum.

  12. Development of Computational Aeroacoustics Code for Jet Noise and Flow Prediction

    NASA Technical Reports Server (NTRS)

    Keith, Theo G., Jr.; Hixon, Duane R.

    2002-01-01

    Accurate prediction of jet fan and exhaust plume flow and noise generation and propagation is very important in developing advanced aircraft engines that will pass current and future noise regulations. In jet fan flows as well as exhaust plumes, two major sources of noise are present: large-scale, coherent instabilities and small-scale turbulent eddies. In previous work for the NASA Glenn Research Center, three strategies have been explored in an effort to computationally predict the noise radiation from supersonic jet exhaust plumes. In order from the least expensive computationally to the most expensive computationally, these are: 1) Linearized Euler equations (LEE). 2) Very Large Eddy Simulations (VLES). 3) Large Eddy Simulations (LES). The first method solves the linearized Euler equations (LEE). These equations are obtained by linearizing about a given mean flow and the neglecting viscous effects. In this way, the noise from large-scale instabilities can be found for a given mean flow. The linearized Euler equations are computationally inexpensive, and have produced good noise results for supersonic jets where the large-scale instability noise dominates, as well as for the tone noise from a jet engine blade row. However, these linear equations do not predict the absolute magnitude of the noise; instead, only the relative magnitude is predicted. Also, the predicted disturbances do not modify the mean flow, removing a physical mechanism by which the amplitude of the disturbance may be controlled. Recent research for isolated airfoils' indicates that this may not affect the solution greatly at low frequencies. The second method addresses some of the concerns raised by the LEE method. In this approach, called Very Large Eddy Simulation (VLES), the unsteady Reynolds averaged Navier-Stokes equations are solved directly using a high-accuracy computational aeroacoustics numerical scheme. With the addition of a two-equation turbulence model and the use of a relatively

  13. Comparison of a Structured-LES and an Unstructured-DES Code for Predicting Combustion Instabilities in a Longitudinal Mode Rocket

    DTIC Science & Technology

    2014-12-01

    Structured-LES and an Unstructured-DES Code for Predicting Combustion Instabilities in a Longitudinal Mode Rocket 5b. GRANT NUMBER 5c. PROGRAM ELEMENT...Predicting Combustion Instabilities in a Longitudinal Mode Rocket Matt Harvazinski, Doug Tally, & Venke Sankaran Air Force Research Laboratory Edwards

  14. Chaotic cold accretion on to black holes

    NASA Astrophysics Data System (ADS)

    Gaspari, M.; Ruszkowski, M.; Oh, S. Peng

    2013-07-01

    Bondi theory is often assumed to adequately describe the mode of accretion in astrophysical environments. However, the Bondi flow must be adiabatic, spherically symmetric, steady, unperturbed, with constant boundary conditions. Using 3D adaptive mesh refinement simulations, linking the 50 kpc to the sub-parsec (sub-pc) scales over the course of 40 Myr, we systematically relax the classic assumptions in a typical galaxy hosting a supermassive black hole. In the more realistic scenario, where the hot gas is cooling, while heated and stirred on large scales, the accretion rate is boosted up to two orders of magnitude compared with the Bondi prediction. The cause is the non-linear growth of thermal instabilities, leading to the condensation of cold clouds and filaments when tcool/tff ≲ 10. The clouds decouple from the hot gas, `raining' on to the centre. Subsonic turbulence of just over 100 km s-1 (M > 0.2) induces the formation of thermal instabilities, even in the absence of heating, while in the transonic regime turbulent dissipation inhibits their growth (tturb/tcool ≲ 1). When heating restores global thermodynamic balance, the formation of the multiphase medium is violent, and the mode of accretion is fully cold and chaotic. The recurrent collisions and tidal forces between clouds, filaments and the central clumpy torus promote angular momentum cancellation, hence boosting accretion. On sub-pc scales the clouds are channelled to the very centre via a funnel. In this study, we do not inject a fixed initial angular momentum, though vorticity is later seeded by turbulence. A good approximation to the accretion rate is the cooling rate, which can be used as subgrid model, physically reproducing the boost factor of 100 required by cosmological simulations, while accounting for the frequent fluctuations. Since our modelling is fairly general (turbulence/heating due to AGN feedback, galaxy motions, mergers, stellar evolution), chaotic cold accretion may be common in

  15. Predictions of bubbly flows in vertical pipes using two-fluid models in CFDS-FLOW3D code

    SciTech Connect

    Banas, A.O.; Carver, M.B.; Unrau, D.

    1995-09-01

    This paper reports the results of a preliminary study exploring the performance of two sets of two-fluid closure relationships applied to the simulation of turbulent air-water bubbly upflows through vertical pipes. Predictions obtained with the default CFDS-FLOW3D model for dispersed flows were compared with the predictions of a new model (based on the work of Lee), and with the experimental data of Liu. The new model, implemented in the CFDS-FLOW3D code, included additional source terms in the {open_quotes}standard{close_quotes} {kappa}-{epsilon} transport equations for the liquid phase, as well as modified model coefficients and wall functions. All simulations were carried out in a 2-D axisymmetric format, collapsing the general multifluid framework of CFDS-FLOW3D to the two-fluid (air-water) case. The newly implemented model consistently improved predictions of radial-velocity profiles of both phases, but failed to accurately reproduce the experimental phase-distribution data. This shortcoming was traced to the neglect of anisotropic effects in the modelling of liquid-phase turbulence. In this sense, the present investigation should be considered as the first step toward the ultimate goal of developing a theoretically sound and universal CFD-type two-fluid model for bubbly flows in channels.

  16. Modern Airfoil Ice Accretions

    NASA Technical Reports Server (NTRS)

    Addy, Harold E., Jr.; Potapczuk, Mark G.; Sheldon, David W.

    1997-01-01

    This report presents results from the first icing tests performed in the Modem Airfoils program. Two airfoils have been subjected to icing tests in the NASA Lewis Icing Research Tunnel (IRT). Both airfoils were two dimensional airfoils; one was representative of a commercial transport airfoil while the other was representative of a business jet airfoil. The icing test conditions were selected from the FAR Appendix C envelopes. Effects on aerodynamic performance are presented including the effects of varying amounts of glaze ice as well as the effects of approximately the same amounts of glaze, mixed, and rime ice. Actual ice shapes obtained in these tests are also presented for these cases. In addition, comparisons are shown between ice shapes from the tests and ice shapes predicted by the computer code, LEWICE for similar conditions. Significant results from the tests are that relatively small amounts of ice can have nearly as much effect on airfoil lift coefficient as much greater amounts of ice and that glaze ice usually has a more detrimental effect than either rime or mixed ice. LEWICE predictions of ice shapes, in general, compared reasonably well with ice shapes obtained in the IRT, although differences in details of the ice shapes were observed.

  17. Prediction of Business Jet Airloads Using The Overflow Navier-Stokes Code

    NASA Technical Reports Server (NTRS)

    Bounajem, Elias; Buning, Pieter G.

    2001-01-01

    The objective of this work is to evaluate the application of Navier-Stokes computational fluid dynamics technology, for the purpose of predicting off-design condition airloads on a business jet configuration in the transonic regime. The NASA Navier-Stokes flow solver OVERFLOW with Chimera overset grid capability, availability of several numerical schemes and convergence acceleration techniques was selected for this work. A set of scripts which have been compiled to reduce the time required for the grid generation process are described. Several turbulence models are evaluated in the presence of separated flow regions on the wing. Computed results are compared to available wind tunnel data for two Mach numbers and a range of angles-of-attack. Comparisons of wing surface pressure from numerical simulation and wind tunnel measurements show good agreement up to fairly high angles-of-attack.

  18. Positive predictive value of diagnosis coding for hemolytic anemias in the Danish National Patient Register

    PubMed Central

    Hansen, Dennis Lund; Overgaard, Ulrik Malthe; Pedersen, Lars; Frederiksen, Henrik

    2016-01-01

    Purpose The nationwide public health registers in Denmark provide a unique opportunity for evaluation of disease-associated morbidity if the positive predictive values (PPVs) of the primary diagnosis are known. The aim of this study was to evaluate the predictive values of hemolytic anemias registered in the Danish National Patient Register. Patients and methods All patients with a first-ever diagnosis of hemolytic anemia from either specialist outpatient clinic contact or inpatient admission at Odense University Hospital from January 1994 through December 2011 were considered for inclusion. Patients with mechanical reason for hemolysis such as an artificial heart valve, and patients with vitamin-B12 or folic acid deficiency were excluded. Results We identified 412 eligible patients: 249 with a congenital hemolytic anemia diagnosis and 163 with acquired hemolytic anemia diagnosis. In all, hemolysis was confirmed in 359 patients, yielding an overall PPV of 87.1% (95% confidence interval [CI]: 83.5%–90.2%). A diagnosis could be established in 392 patients of whom 355 patients had a hemolytic diagnosis. Diagnosis was confirmed in 197 of the 249 patients with congenital hemolytic anemia, yielding a PPV of 79.1% (95% CI: 73.5%–84.0%). Diagnosis of acquired hemolytic anemia could be confirmed in 136 of the 163 patients, resulting in a PPV of 83.4% (95% CI: 76.8%–88.8%). For hemoglobinopathy PPV was 84.1% (95% CI: 77.4%–89.4%), for hereditary spherocytosis PPV was 80.6% (95% CI: 69.5%–88.9%), and for autoimmune hemolytic anemia PPV was 78.4% (95% CI: 70.4%–85.0%). Conclusion The PPV of hemolytic anemias was moderately high. The PPVs were comparable in the three main categories of overall hemolysis, and congenital and acquired hemolytic anemia. PMID:27445504

  19. Signalign: An Ontology of DNA as Signal for Comparative Gene Structure Prediction Using Information-Coding-and-Processing Techniques.

    PubMed

    Yu, Ning; Guo, Xuan; Gu, Feng; Pan, Yi

    2016-03-01

    Conventional character-analysis-based techniques in genome analysis manifest three main shortcomings-inefficiency, inflexibility, and incompatibility. In our previous research, a general framework, called DNA As X was proposed for character-analysis-free techniques to overcome these shortcomings, where X is the intermediates, such as digit, code, signal, vector, tree, graph network, and so on. In this paper, we further implement an ontology of DNA As Signal, by designing a tool named Signalign for comparative gene structure analysis, in which DNA sequences are converted into signal series, processed by modified method of dynamic time warping and measured by signal-to-noise ratio (SNR). The ontology of DNA As Signal integrates the principles and concepts of other disciplines including information coding theory and signal processing into sequence analysis and processing. Comparing with conventional character-analysis-based methods, Signalign can not only have the equivalent or superior performance, but also enrich the tools and the knowledge library of computational biology by extending the domain from character/string to diverse areas. The evaluation results validate the success of the character-analysis-free technique for improved performances in comparative gene structure prediction.

  20. How can a recurrent neurodynamic predictive coding model cope with fluctuation in temporal patterns? Robotic experiments on imitative interaction.

    PubMed

    Ahmadi, Ahmadreza; Tani, Jun

    2017-03-21

    The current paper examines how a recurrent neural network (RNN) model using a dynamic predictive coding scheme can cope with fluctuations in temporal patterns through generalization in learning. The conjecture driving this present inquiry is that a RNN model with multiple timescales (MTRNN) learns by extracting patterns of change from observed temporal patterns, developing an internal dynamic structure such that variance in initial internal states account for modulations in corresponding observed patterns. We trained a MTRNN with low-dimensional temporal patterns, and assessed performance on an imitation task employing these patterns. Analysis reveals that imitating fluctuated patterns consists in inferring optimal internal states by error regression. The model was then tested through humanoid robotic experiments requiring imitative interaction with human subjects. Results show that spontaneous and lively interaction can be achieved as the model successfully copes with fluctuations naturally occurring in human movement patterns.

  1. A computational model for the prediction of jet entrainment in the vicinity of nozzle boattails (the BOAT code)

    NASA Technical Reports Server (NTRS)

    Dash, S. M.; Pergament, H. S.

    1978-01-01

    The development of a computational model (BOAT) for calculating nearfield jet entrainment, and its incorporation in an existing methodology for the prediction of nozzle boattail pressures, is discussed. The model accounts for the detailed turbulence and thermochemical processes occurring in the mixing layer formed between a jet exhaust and surrounding external stream while interfacing with the inviscid exhaust and external flowfield regions in an overlaid, interactive manner. The ability of the BOAT model to analyze simple free shear flows is assessed by comparisons with fundamental laboratory data. The overlaid procedure for incorporating variable pressures into BOAT and the entrainment correction employed to yield an effective plume boundary for the inviscid external flow are demonstrated. This is accomplished via application of BOAT in conjunction with the codes comprising the NASA/LRC patched viscous/inviscid methodology for determining nozzle boattail drag for subsonic/transonic external flows.

  2. TFaNS Tone Fan Noise Design/Prediction System. Volume 1; System Description, CUP3D Technical Documentation and Manual for Code Developers

    NASA Technical Reports Server (NTRS)

    Topol, David A.

    1999-01-01

    TFaNS is the Tone Fan Noise Design/Prediction System developed by Pratt & Whitney under contract to NASA Lewis (presently NASA Glenn). The purpose of this system is to predict tone noise emanating from a fan stage including the effects of reflection and transmission by the rotor and stator and by the duct inlet and nozzle. These effects have been added to an existing annular duct/isolated stator noise prediction capability. TFaNS consists of: The codes that compute the acoustic properties (reflection and transmission coefficients) of the various elements and write them to files. Cup3D: Fan Noise Coupling Code that reads these files, solves the coupling problem, and outputs the desired noise predictions. AWAKEN: CFD/Measured Wake Postprocessor which reformats CFD wake predictions and/or measured wake data so it can be used by the system. This volume of the report provides technical background for TFaNS including the organization of the system and CUP3D technical documentation. This document also provides information for code developers who must write Acoustic Property Files in the CUP3D format. This report is divided into three volumes: Volume I: System Description, CUP3D Technical Documentation, and Manual for Code Developers; Volume II: User's Manual, TFaNS Vers. 1.4; Volume III: Evaluation of System Codes.

  3. Magnetospheric accretion in EX Lupi

    NASA Astrophysics Data System (ADS)

    Abraham, Peter; Kospal, Agnes; Bouvier, Jerome

    2016-08-01

    We propose to observe EX Lup, the prototype of the EXor class of young eruptive stars, in order to understand how the accretion process works in the quiescent system. Here, we request 2.6 hours of telescope time on Spitzer, to carry out a mid-infrared photometric monitoring, which we will supplement with simultaneous ground-based optical and near-infrared data. The multi-wavelength light curves will allow us to reliably separate the effects of fluctuating accretion rate from the rotation of the star. By analyzing the variations of the accretion rate we will determine whether EX Lup accretes through a few stable accretion columns or several short-lived random accretion streams. With this campaign, EX Lup will become one of the T Tauri systems where the accretion process is best understood.

  4. ACCRETION ONTO PLANETARY MASS COMPANIONS OF LOW-MASS YOUNG STARS

    SciTech Connect

    Zhou, Yifan; Herczeg, Gregory J.; Kraus, Adam L.; Metchev, Stanimir; Cruz, Kelle L. E-mail: zhouyifan1012@gmail.com

    2014-03-01

    Measurements of accretion rates onto planetary mass objects may distinguish between different planet formation mechanisms, which predict different accretion histories. In this Letter, we use Hubble Space Telescope (HST)/WFC3 UVIS optical photometry to measure accretion rates onto three accreting objects, GSC 06214–00210 b, GQ Lup b, and DH Tau b, that are at the planet/brown dwarf boundary and are companions to solar mass stars. The excess optical emission in the excess accretion continuum yields mass accretion rates of 10{sup –9}-10{sup –11} M {sub ☉} yr{sup –1} for these three objects. Their accretion rates are an order of magnitude higher than expected from the correlation between mass and accretion rates measured from the UV excess, which is applicable if these wide planetary mass companions formed by protostellar core fragmentation. The high accretion rates and large separation from the central star demonstrate the presence of massive disks around these objects. Models for the formation and evolution of wide planetary mass companions should account for their large accretion rates. High ratios of Hα luminosity over accretion luminosity for objects with low accretion rates suggest that searches for Hα emission may be an efficient way to find accreting planets.

  5. Accretion onto Planetary Mass Companions of Low-mass Young Stars

    NASA Astrophysics Data System (ADS)

    Zhou, Yifan; Herczeg, Gregory J.; Kraus, Adam L.; Metchev, Stanimir; Cruz, Kelle L.

    2014-03-01

    Measurements of accretion rates onto planetary mass objects may distinguish between different planet formation mechanisms, which predict different accretion histories. In this Letter, we use Hubble Space Telescope (HST)/WFC3 UVIS optical photometry to measure accretion rates onto three accreting objects, GSC 06214-00210 b, GQ Lup b, and DH Tau b, that are at the planet/brown dwarf boundary and are companions to solar mass stars. The excess optical emission in the excess accretion continuum yields mass accretion rates of 10-9-10-11 M ⊙ yr-1 for these three objects. Their accretion rates are an order of magnitude higher than expected from the correlation between mass and accretion rates measured from the UV excess, which is applicable if these wide planetary mass companions formed by protostellar core fragmentation. The high accretion rates and large separation from the central star demonstrate the presence of massive disks around these objects. Models for the formation and evolution of wide planetary mass companions should account for their large accretion rates. High ratios of Hα luminosity over accretion luminosity for objects with low accretion rates suggest that searches for Hα emission may be an efficient way to find accreting planets.

  6. FITDisk: Cataclysmic Variable Accretion Disk Demonstration Tool

    NASA Astrophysics Data System (ADS)

    Wood, Matthew A.; Dolence, J.

    2013-05-01

    FITDisk models accretion disk phenomena using a fully three-dimensional hydrodynamics calculation, and data can either be visualized as they are computed or stored to hard drive for later playback at a fast frame rate. Simulations are visualized using OpenGL graphics and the viewing angle can be changed interactively. Pseudo light curves of simulated systems can be plotted along with the associated Fourier amplitude spectrum. It provides an easy to use graphical user interface as well as 3-D interactive graphics. The code computes the evolution of a CV accretion disk, visualizes results in real time, records and plays back simulations, and generates and plots pseudo light curves and associated power spectra.

  7. Hoyle-Lyttleton Accretion from a Planar Wind

    NASA Astrophysics Data System (ADS)

    Raymer, Eric

    2014-01-01

    Two-dimensional hydrodynamic simulations of Hoyle-Lyttleton accretion have informed predictions about the evolution of wind-driven accretion systems for over two decades. These simulations frequently exhibit dramatic nonlinear behavior such as the flip-flop instability and the formation of transient accretion disks. During disk accretion, the mass accretion rate is suppressed and angular momentum accretion occurs at quasi-Keplerian rates. These results have been used to interpret neutron star accretion from the equatorially enhanced wind of a Be star in Be/X-ray Binaries. We employ large-scale hydrodynamic simulations to investigate whether the flip-flop instability is possible in three dimensions or is simply a consequence of the restrictions on a 2D flow. We do not observe the flip-flop instability in 3D for any values of the wind scale height or density. Moreover, the angular momentum vector of the accreting gas is typically found to be in the plane of the disk wind rather than perpendicular to it as one might expect based on the results of 2D planar simulations. We measure large-scale asymmetries about the plane of the disk wind that arise due to rotational flow near the accretor. Gas is driven above and below the plane, where it interacts with the bow shock and results in a time-varying shock structure. Winds with scale heights of 0.25 Ra enter locked rotation modes that remain stable for the duration of our computational runs. During this phase, the mass accretion rate is suppressed by up to two orders of magnitude below the analytical prediction and angular momentum accretion occurs at sub-Keplerian values.

  8. Massive star formation by accretion. I. Disc accretion

    NASA Astrophysics Data System (ADS)

    Haemmerlé, L.; Eggenberger, P.; Meynet, G.; Maeder, A.; Charbonnel, C.

    2016-01-01

    Context. Massive stars likely form by accretion and the evolutionary track of an accreting forming star corresponds to what is called the birthline in the Hertzsprung-Russell (HR) diagram. The shape of this birthline is quite sensitive to the evolution of the entropy in the accreting star. Aims: We first study the reasons why some birthlines published in past years present different behaviours for a given accretion rate. We then revisit the question of the accretion rate, which allows us to understand the distribution of the observed pre-main-sequence (pre-MS) stars in the HR diagram. Finally, we identify the conditions needed to obtain a large inflation of the star along its pre-MS evolution that may push the birthline towards the Hayashi line in the upper part of the HR diagram. Methods: We present new pre-MS models including accretion at various rates and for different initial structures of the accreting core. We compare them with previously published equivalent models. From the observed upper envelope of pre-MS stars in the HR diagram, we deduce the accretion law that best matches the accretion history of most of the intermediate-mass stars. Results: In the numerical computation of the time derivative of the entropy, some treatment leads to an artificial loss of entropy and thus reduces the inflation that the accreting star undergoes along the birthline. In the case of cold disc accretion, the existence of a significant swelling during the accretion phase, which leads to radii ≳ 100 R⊙ and brings the star back to the red part of the HR diagram, depends sensitively on the initial conditions. For an accretion rate of 10-3M⊙ yr-1, only models starting from a core with a significant radiative region evolve back to the red part of the HR diagram. We also obtain that, in order to reproduce the observed upper envelope of pre-MS stars in the HR diagram with an accretion law deduced from the observed mass outflows in ultra-compact HII regions, the fraction of the

  9. Accretion of southern Alaska

    USGS Publications Warehouse

    Hillhouse, J.W.

    1987-01-01

    Paleomagnetic data from southern Alaska indicate that the Wrangellia and Peninsular terranes collided with central Alaska probably by 65 Ma ago and certainly no later than 55 Ma ago. The accretion of these terranes to the mainland was followed by the arrival of the Ghost Rocks volcanic assemblage at the southern margin of Kodiak Island. Poleward movement of these terranes can be explained by rapid motion of the Kula oceanic plate, mainly from 85 to 43 Ma ago, according to recent reconstructions derived from the hot-spot reference frame. After accretion, much of southwestern Alaska underwent a counterclockwise rotation of about 50 ?? as indicated by paleomagnetic poles from volcanic rocks of Late Cretaceous and Early Tertiary age. Compression between North America and Asia during opening of the North Atlantic (68-44 Ma ago) may account for the rotation. ?? 1987.

  10. Matter accreting neutron stars

    NASA Technical Reports Server (NTRS)

    Meszaros, P.

    1981-01-01

    Some of the fundamental neutron star parameters, such as the mass and the magnetic field strength, were experimentally determined in accreting neutron star systems. Some of the relevant data and the models used to derive useful information from them, are reviewed concentrating mainly on X-ray pulsars. The latest advances in our understanding of the radiation mechanisms and the transfer in the strongly magnetized polar cap regions are discussed.

  11. Accretion disk electrodynamics

    NASA Technical Reports Server (NTRS)

    Coroniti, F. V.

    1985-01-01

    Accretion disk electrodynamic phenomena are separable into two classes: (1) disks and coronas with turbulent magnetic fields; (2) disks and black holes which are connected to a large-scale external magnetic field. Turbulent fields may originate in an alpha-omega dynamo, provide anomalous viscous transport, and sustain an active corona by magnetic buoyancy. The large-scale field can extract energy and angular momentum from the disk and black hole, and be dynamically configured into a collimated relativistic jet.

  12. Accretion of the Earth.

    PubMed

    Canup, Robin M

    2008-11-28

    The origin of the Earth and its Moon has been the focus of an enormous body of research. In this paper I review some of the current models of terrestrial planet accretion, and discuss assumptions common to most works that may require re-examination. Density-wave interactions between growing planets and the gas nebula may help to explain the current near-circular orbits of the Earth and Venus, and may result in large-scale radial migration of proto-planetary embryos. Migration would weaken the link between the present locations of the planets and the original provenance of the material that formed them. Fragmentation can potentially lead to faster accretion and could also damp final planet orbital eccentricities. The Moon-forming impact is believed to be the final major event in the Earth's accretion. Successful simulations of lunar-forming impacts involve a differentiated impactor containing between 0.1 and 0.2 Earth masses, an impact angle near 45 degrees and an impact speed within 10 per cent of the Earth's escape velocity. All successful impacts-with or without pre-impact rotation-imply that the Moon formed primarily from material originating from the impactor rather than from the proto-Earth. This must ultimately be reconciled with compositional similarities between the Earth and the Moon.

  13. Comparison of measured responses in two spectrally-sensitive X-ray detectors to predictions obtained using the its radiation transport code

    SciTech Connect

    Carlson, G.A.; Beutler, D.E.; Seager, K.D.; Knott, D.P.

    1988-12-01

    Responses of a Ge detector and a filtered TLD array detector have been measured at a steady-state bremsstrahlung source (the Pelletron), at endpoint energies from 150 to 900 keV. Predictions of detector response using Monte Carlo ITS codes are found to be in excellent agreement with measured responses for both detectors. These results extend the range of validity of the ITS codes. With calibration provided by these experiments and by ITS predictions, dose-depth data from the TLD arrays can be used to estimate flash X-ray source endpoint energies.

  14. Comparison of measured responses in two spectrally-sensitive x-ray detectors to predictions obtained using the ITS (Integrated Tiger Series) radiation transport code

    SciTech Connect

    Carlson, G.A.; Beutler, D.E.; Seager, K.D.; Knott, D.P.

    1988-01-01

    Responses of a Ge detector and a filtered TLD array detector have been measured at a steady-state bremsstrahlung source (the Pelletron), at endpoint energies from 150 to 900 keV. Predictions of detector response using Monte Carlo ITS codes are found to be in excellent agreement with measured response for both detectors. These results extend the range of validity of the ITS codes. With calibration provided by these experiments and by ITS predictions, dose-depth data from the TLD arrays can be used to estimate flash x-ray source endpoint energies.

  15. Comparison of the Aerospace Systems Test Reactor loss-of-coolant test data with predictions of the 3D-AIRLOCA code

    SciTech Connect

    Warinner, D.K.

    1983-01-01

    This paper compares the predictions of the revised 3D-AIRLOCA computer code to those data available from the Aerospace Systems Test Reactor's (ASTR's) loss-of-coolant-accident (LOCA) tests run in 1964. The theoretical and experimental hot-spot temperature responses compare remarkably well. In the thirteen cases studied, the irradiation powers varied from 0.4 to 8.87 MW; the irradiation times were 300, 1540, 1800, and 10/sup 4/ s. The degrees of agreement between the data and predictions provide an experimental validation of the 3D-AIRLOCA code.

  16. Analytical determination of propeller performance degradation due to ice accretion

    NASA Technical Reports Server (NTRS)

    Miller, T. L.

    1986-01-01

    A computer code has been developed which is capable of computing propeller performance for clean, glaze, or rime iced propeller configurations, thereby providing a mechanism for determining the degree of performance degradation which results from a given icing encounter. The inviscid, incompressible flow field at each specified propeller radial location is first computed using the Theodorsen transformation method of conformal mapping. A droplet trajectory computation then calculates droplet impingement points and airfoil collection efficiency for each radial location, at which point several user-selectable empirical correlations are available for determining the aerodynamic penalities which arise due to the ice accretion. Propeller performance is finally computed using strip analysis for either the clean or iced propeller. In the iced mode, the differential thrust and torque coefficient equations are modified by the drag and lift coefficient increments due to ice to obtain the appropriate iced values. Comparison with available experimental propeller icing data shows good agreement in several cases. The code's capability to properly predict iced thrust coefficient, power coefficient, and propeller efficiency is shown to be dependent on the choice of empirical correlation employed as well as proper specification of radial icing extent.

  17. Where a Neutron Star's Accretion Disk Ends

    NASA Astrophysics Data System (ADS)

    Kohler, Susanna

    2016-03-01

    In X-ray binaries that consist of a neutron star and a companion star, gas funnels from the companion into an accretion disk surrounding the neutron star, spiraling around until it is eventually accreted. How do the powerful magnetic fields threading through the neutron star affect this accretion disk? Recent observations provide evidence that they may push the accretion disk away from the neutron stars surface.Truncated DisksTheoretical models have indicated that neutron star accretion disks may not extend all the way in to the surface of a neutron star, but may instead be truncated at a distance. This prediction has been difficult to test observationally, however, due to the challenge of measuring the location of the inner disk edge in neutron-star X-ray binaries.In a new study, however, a team of scientists led by Ashley King (Einstein Fellow at Stanford University) has managed to measure the location of the inner edge of the disk in Aquila X-1, a neutron-star X-ray binary located 17,000 light-years away.Iron line feature detected by Swift (red) and NuSTAR (black). The symmetry of the line is one of the indicators that the disk is located far from the neutron star; if the inner regions of the disk were close to the neutron star, severe relativistic effects would skew the line to be asymmetric. [King et al. 2016]Measurements from ReflectionsKing and collaborators used observations made by NuSTAR and Swift/XRT both X-ray space observatories of Aquila X-1 during the peak of an X-ray outburst. By observing the reflection of Aquila X-1s emission off of the inner regions of the accretion disk, the authors were able to estimate the location of the inner edge of the disk.The authors find that this inner edge sits at ~15 gravitational radii. Since the neutron stars surface is at ~5 gravitational radii, this means that the accretion disk is truncated far from the stars surface. In spite of this truncation, material still manages to cross the gap and accrete onto the

  18. Guide to AERO2S and WINGDES Computer Codes for Prediction and Minimization of Drag Due to Lift

    NASA Technical Reports Server (NTRS)

    Carlson, Harry W.; Chu, Julio; Ozoroski, Lori P.; McCullers, L. Arnold

    1997-01-01

    The computer codes, AER02S and WINGDES, are now widely used for the analysis and design of airplane lifting surfaces under conditions that tend to induce flow separation. These codes have undergone continued development to provide additional capabilities since the introduction of the original versions over a decade ago. This code development has been reported in a variety of publications (NASA technical papers, NASA contractor reports, and society journals). Some modifications have not been publicized at all. Users of these codes have suggested the desirability of combining in a single document the descriptions of the code development, an outline of the features of each code, and suggestions for effective code usage. This report is intended to supply that need.

  19. Turbulent Distortion of Condensate Accretion

    NASA Technical Reports Server (NTRS)

    Hazoume, R.; Orou Chabi, J.; Johnson, J. A., III

    1997-01-01

    When a simple model for the relationship between the density-temperature fluctuation correlation and mean values is used, we determine that the rate of change of turbulent intensity can influence directly the accretion rate of droplets. Considerable interest exists in the accretion rate for condensates in nonequilibrium flow with icing and the potential role which reactant accretion can play in nonequilibrium exothermic reactant processes. Turbulence is thought to play an important role in such flows. It has already been experimentally determined that turbulence influences the sizes of droplets in the heterogeneous nucleation of supersaturated vapors. This paper addresses the issue of the possible influence of turbulence on the accretion rate of droplets.

  20. Systemizers Are Better Code-Breakers: Self-Reported Systemizing Predicts Code-Breaking Performance in Expert Hackers and Naïve Participants.

    PubMed

    Harvey, India; Bolgan, Samuela; Mosca, Daniel; McLean, Colin; Rusconi, Elena

    2016-01-01

    Studies on hacking have typically focused on motivational aspects and general personality traits of the individuals who engage in hacking; little systematic research has been conducted on predispositions that may be associated not only with the choice to pursue a hacking career but also with performance in either naïve or expert populations. Here, we test the hypotheses that two traits that are typically enhanced in autism spectrum disorders-attention to detail and systemizing-may be positively related to both the choice of pursuing a career in information security and skilled performance in a prototypical hacking task (i.e., crypto-analysis or code-breaking). A group of naïve participants and of ethical hackers completed the Autism Spectrum Quotient, including an attention to detail scale, and the Systemizing Quotient (Baron-Cohen et al., 2001, 2003). They were also tested with behavioral tasks involving code-breaking and a control task involving security X-ray image interpretation. Hackers reported significantly higher systemizing and attention to detail than non-hackers. We found a positive relation between self-reported systemizing (but not attention to detail) and code-breaking skills in both hackers and non-hackers, whereas attention to detail (but not systemizing) was related with performance in the X-ray screening task in both groups, as previously reported with naïve participants (Rusconi et al., 2015). We discuss the theoretical and translational implications of our findings.

  1. Systemizers Are Better Code-Breakers: Self-Reported Systemizing Predicts Code-Breaking Performance in Expert Hackers and Naïve Participants

    PubMed Central

    Harvey, India; Bolgan, Samuela; Mosca, Daniel; McLean, Colin; Rusconi, Elena

    2016-01-01

    Studies on hacking have typically focused on motivational aspects and general personality traits of the individuals who engage in hacking; little systematic research has been conducted on predispositions that may be associated not only with the choice to pursue a hacking career but also with performance in either naïve or expert populations. Here, we test the hypotheses that two traits that are typically enhanced in autism spectrum disorders—attention to detail and systemizing—may be positively related to both the choice of pursuing a career in information security and skilled performance in a prototypical hacking task (i.e., crypto-analysis or code-breaking). A group of naïve participants and of ethical hackers completed the Autism Spectrum Quotient, including an attention to detail scale, and the Systemizing Quotient (Baron-Cohen et al., 2001, 2003). They were also tested with behavioral tasks involving code-breaking and a control task involving security X-ray image interpretation. Hackers reported significantly higher systemizing and attention to detail than non-hackers. We found a positive relation between self-reported systemizing (but not attention to detail) and code-breaking skills in both hackers and non-hackers, whereas attention to detail (but not systemizing) was related with performance in the X-ray screening task in both groups, as previously reported with naïve participants (Rusconi et al., 2015). We discuss the theoretical and translational implications of our findings. PMID:27242491

  2. Neutron star accretion and the neutrino fireball

    SciTech Connect

    Colgate, S.A.; Herant, M.E.; Benz, W.

    1991-11-26

    The mixing necessary to explain the ``Fe`` line widths and possibly the observed red shifts of 1987A is explained in terms of large scale, entropy conserving, up and down flows (calculated with a smooth particle 2-D code) taking place between the neutron star and the explosion shock wave due to the gravity and neutrino deposition. Depending upon conditions of entropy and mass flux further accretion takes place in single events, similar to relaxation oscillator, fed by the downward flows of low entropy matter. The shock, in turn, is driven by the upflow of the buoyant high entropy bubbles. Some accretion events will reach a temperature high enough to create a neutrino ``fireball,`` a region hot enough, 11 Mev, so as to be partially opaque to its own (neutrino) radiation. The continuing neutrino deposition drives the explosion shock until the entropy of matter flowing downwards onto the neutron star is high enough to prevent further accretion. This process should result in a robust supernova explosion.

  3. Minidisks in Binary Black Hole Accretion

    NASA Astrophysics Data System (ADS)

    Ryan, Geoffrey; MacFadyen, Andrew

    2017-02-01

    Newtonian simulations have demonstrated that accretion onto binary black holes produces accretion disks around each black hole (“minidisks”), fed by gas streams flowing through the circumbinary cavity from the surrounding circumbinary disk. We study the dynamics and radiation of an individual black hole minidisk using 2D hydrodynamical simulations performed with a new general relativistic version of the moving-mesh code Disco. We introduce a comoving energy variable that enables highly accurate integration of these high Mach number flows. Tidally induced spiral shock waves are excited in the disk and propagate through the innermost stable circular orbit, providing a Reynolds stress that causes efficient accretion by purely hydrodynamic means and producing a radiative signature brighter in hard X-rays than the Novikov–Thorne model. Disk cooling is provided by a local blackbody prescription that allows the disk to evolve self-consistently to a temperature profile where hydrodynamic heating is balanced by radiative cooling. We find that the spiral shock structure is in agreement with the relativistic dispersion relation for tightly wound linear waves. We measure the shock-induced dissipation and find outward angular momentum transport corresponding to an effective alpha parameter of order 0.01. We perform ray-tracing image calculations from the simulations to produce theoretical minidisk spectra and viewing-angle-dependent images for comparison with observations.

  4. A Mapping of the Viscous Flow Behavior in a Controlled Diffusion Compressor Cascade Using Laser Doppler Velocimetry and Preliminary Evaluation of Codes for the Prediction of Stall.

    DTIC Science & Technology

    1988-03-01

    using Computational Fluid Dynamic (CFD) codes. Design point is analyzed using Euler or potential methods, adding a boundary layer prediction, and using...Company Ltd. Dept. T-T P. 0. Box CH-5401 Baden SWITZERLAND 29. Professor Leonhard Fottner .......... 0...... ....... 1 Department of Aeronautics and

  5. Identification of a RNA-Seq Based 8-Long Non-Coding RNA Signature Predicting Survival in Esophageal Cancer

    PubMed Central

    Fan, Qiaowei; Liu, Bingrong

    2016-01-01

    Background Accumulating evidence suggests the involvement of long non-coding RNAs (lncRNAs) as oncogenic or tumor suppressive regulators in the development of various cancers. In the present study, we aimed to identify a lncRNA signature based on RNA sequencing (RNA-seq) data to predict survival in esophageal cancer. Material/Methods The RNA-seq lncRNA expression data and clinical information were downloaded from The Cancer Genome Atlas (TCGA) database. Differentially expressed lncRNAs were screened out between esophageal cancer and normal tissues. Univariate and multivariate Cox regression analysis were performed to establish a lncRNA-related prognostic model. Receiver operating characteristic (ROC) analysis was conducted to test the sensitivity and specificity of the model. GO (gene ontology) functional and KEGG pathway enrichment analyses were performed for mRNAs co-expressed with the lncRNAs to explore the potential functions of the prognostic lncRNAs. Results A total of 265 differentially expressed lncRNAs were identified between esophageal cancer and normal tissues. After univariate and multivariate Cox regression analysis, eight lncRNAs (GS1-600G8.5, LINC00365, CTD-2357A8.3, RP11-705O24.1, LINC01554, RP1-90J4.1, RP11-327J17.1, and LINC00176) were finally screened out to establish a predictive model by which patients could be classified into high-risk and low-risk groups with significantly different overall survival. Further analysis indicated independent prognostic capability of the 8-lncRNA signature from other clinicopathological factors. ROC curve analysis demonstrated good performance of the 8-lncRNA signature. Functional enrichment analysis showed that the prognostic lncRNAs were mainly associated with esophageal cancer related biological processes such as regulation of glucose metabolic process and amino acid and lipids metabolism. Conclusions Our study developed a novel candidate model providing additional and more powerful prognostic information

  6. RADIATIVELY EFFICIENT MAGNETIZED BONDI ACCRETION

    SciTech Connect

    Cunningham, Andrew J.; Klein, Richard I.; McKee, Christopher F.; Krumholz, Mark R.; Teyssier, Romain

    2012-01-10

    We have carried out a numerical study of the effect of large-scale magnetic fields on the rate of accretion from a uniform, isothermal gas onto a resistive, stationary point mass. Only mass, not magnetic flux, accretes onto the point mass. The simulations for this study avoid complications arising from boundary conditions by keeping the boundaries far from the accreting object. Our simulations leverage adaptive refinement methodology to attain high spatial fidelity close to the accreting object. Our results are particularly relevant to the problem of star formation from a magnetized molecular cloud in which thermal energy is radiated away on timescales much shorter than the dynamical timescale. Contrary to the adiabatic case, our simulations show convergence toward a finite accretion rate in the limit in which the radius of the accreting object vanishes, regardless of magnetic field strength. For very weak magnetic fields, the accretion rate first approaches the Bondi value and then drops by a factor of {approx}2 as magnetic flux builds up near the point mass. For strong magnetic fields, the steady-state accretion rate is reduced by a factor of {approx}0.2 {beta}{sup 1/2} compared to the Bondi value, where {beta} is the ratio of the gas pressure to the magnetic pressure. We give a simple expression for the accretion rate as a function of the magnetic field strength. Approximate analytic results are given in the Appendices for both time-dependent accretion in the limit of weak magnetic fields and steady-state accretion for the case of strong magnetic fields.

  7. Lunar Accretion and the Moon’s Initial Thermal State

    NASA Astrophysics Data System (ADS)

    Salmon, Julien; Canup, R. M.

    2012-10-01

    Previous models of lunar formation from an impact-generated disk predict the Moon accretes in less than a year (Ida et al. 1997, Kokubo et al. 2000). Such a rapid accretion implies a fully molten initial Moon (e.g., Pritchard & Stevenson 2000). However, the lack of global faults on the Moon has been interpreted as constraining the depth of initial melting to the Moon’s outer few hundred kilometers (Solomon & Chaiken 1976). Depth estimates for the lunar magma ocean (250 to 1000 km; e.g., Shearer et al. 2006) are also typically less than the Moon’s full radius (1738 km). Taken at face value, such observations appear most consistent with a partially molten initial Moon. We have developed a new lunar accretion model that includes a more accurate description of the inner protolunar disk, taking into account thermal processes that limit the disk’s evolution rate (Salmon and Canup 2012). Our model predicts a 3-phase accretion of the Moon, in which material initially orbiting in the outer disk accumulates rapidly, followed by a much slower evolution of the vapor/fluid inner disk and a final phase of accretion of inner disk material onto the Moon. The Moon’s total accretion then occurs over about 100 years, which could be compatible with partial cooling of protolunar material. We have coupled our accretion model to a simple model for the Moon’s initial thermal state. We use a 3D spherical grid to model the forming Moon. We estimate heating due to each accretionary event using the impactor properties predicted by our accretion model, assuming that a fixed fraction ("h") of each impactor’s kinetic energy is retained locally within the Moon’s interior, and include cooling from the Moon’s surface. We use this model to estimate the Moon’s initial thermal state as a function of h and specific accretionary histories.

  8. LUNAR ACCRETION FROM A ROCHE-INTERIOR FLUID DISK

    SciTech Connect

    Salmon, Julien; Canup, Robin M. E-mail: robin@boulder.swri.edu

    2012-11-20

    We use a hybrid numerical approach to simulate the formation of the Moon from an impact-generated disk, consisting of a fluid model for the disk inside the Roche limit and an N-body code to describe accretion outside the Roche limit. As the inner disk spreads due to a thermally regulated viscosity, material is delivered across the Roche limit and accretes into moonlets that are added to the N-body simulation. Contrary to an accretion timescale of a few months obtained with prior pure N-body codes, here the final stage of the Moon's growth is controlled by the slow spreading of the inner disk, resulting in a total lunar accretion timescale of {approx}10{sup 2} years. It has been proposed that the inner disk may compositionally equilibrate with the Earth through diffusive mixing, which offers a potential explanation for the identical oxygen isotope compositions of the Earth and Moon. However, the mass fraction of the final Moon that is derived from the inner disk is limited by resonant torques between the disk and exterior growing moons. For initial disks containing <2.5 lunar masses (M{sub Last-Quarter-Moon }), we find that a final Moon with mass > 0.8 M{sub Last-Quarter-Moon} contains {<=}60% material derived from the inner disk, with this material preferentially delivered to the Moon at the end of its accretion.

  9. Ice Accretions and Full-Scale Iced Aerodynamic Performance Data for a Two-Dimensional NACA 23012 Airfoil

    NASA Technical Reports Server (NTRS)

    Addy, Harold E., Jr.; Broeren, Andy P.; Potapczuk, Mark G.; Lee, Sam; Guffond, Didier; Montreuil, Emmanuel; Moens, Frederic

    2016-01-01

    in the IRT. From these molds, castings were made that closely replicated the features of the accreted ice. The castings were then mounted on the full-scale model in the F1 tunnel, and aerodynamic performance measurements were made using model surface pressure taps, the facility force balance system, and a large wake rake designed specifically for these tests. Tests were run over a range of Reynolds and Mach numbers. For each run, the model was rotated over a range of angles-of-attack that included airfoil stall. The benchmark data collected during these campaigns were, and continue to be, used for various purposes. The full-scale data form a unique, ice-accretion and associated aerodynamic performance dataset that can be used as a reference when addressing concerns regarding the use of subscale ice-accretion data to assess full-scale icing effects. Further, the data may be used in the development or enhancement of both ice-accretion prediction codes and computational fluid dynamic codes when applied to study the effects of icing. Finally, as was done in the wider study, the data may be used to help determine the level of geometric fidelity needed for artificial ice used to assess aerodynamic degradation due to aircraft icing. The structured, multifaceted approach used in this research effort provides a unique perspective on the aerodynamic effects of aircraft icing. The data presented in this report are available in electronic form upon formal approval by proper NASA and ONERA authorities.

  10. Reverberation Mapping of Accretion Disk Winds in Active Galactic Nuclei

    NASA Astrophysics Data System (ADS)

    Mangham, S.

    2015-09-01

    Reverberation mapping is commonly used for determining black holes masses in AGN from the delayed response of the Broad Line Region (BLR) to fluctuations in the intensity of the AGN continuum source. However, it can also be an effective tool for investigating the structure and kinematics of the BLR itself. Much prior work has been performed to simulate the transfer functions associated with a range of basic geometries (e.g. Keplerian disks, Hubble-like outflows, etc). One promising model for the BLR is that the emission lines are formed in an equatorial accretion disk wind. Here, we predict the reverberation signatures expected from such a model, by modifying the radiative transfer and ionisation code Python that has previously been used to model broad absorption line quasars. This allows to account self-consistently for ionization and radiative transfer effects in the predicted BLR response, which are normally ignored in such calculations. We discuss the agreement between our results and prior work and consider the possibility of detecting the signature of rotating equatorial disk winds in observations obtained by velocity-resolved reverberation mapping campaigns.

  11. Accretion of planetary matter and the lithium problem in the 16 Cygni stellar system

    NASA Astrophysics Data System (ADS)

    Deal, Morgan; Richard, Olivier; Vauclair, Sylvie

    2015-12-01

    Context. The 16 Cygni system is composed of two solar analogues with similar masses and ages. A red dwarf is in orbit around 16 Cygni A, and 16 Cygni B hosts a giant planet. The abundances of heavy elements are similar in the two stars, but lithium is much more depleted in 16 Cygni B than in 16 Cygni A, by a factor of at least 4.7. Aims: The interest of studying the 16 Cygni system is that the two star have the same age and the same initial composition. The differences currently observed must be due to their different evolution, related to the fact that one of them hosts a planet while the other does not. Methods: We computed models of the two stars that precisely fit the observed seismic frequencies. We used the Toulouse Geneva Evolution Code (TGEC), which includes complete atomic diffusion (including radiative accelerations). We compared the predicted surface abundances with the spectroscopic observations and confirm that another mixing process is needed. We then included the effect of accretion-induced fingering convection. Results: The accretion of planetary matter does not change the metal abundances but leads to lithium destruction, which depends upon the accreted mass. A fraction of the Earth's mass is enough to explain the lithium surface abundances of 16 Cygni B. We also checked the beryllium abundances. Conclusions: In the case of accretion of heavy matter onto stellar surfaces, the accreted heavy elements do not remain in the outer convective zones, but are mixed downwards by fingering convection induced by the unstable μ-gradient. Depending on the accreted mass, this mixing process may transport lithium down to its nuclear destruction layers and lead to an extra lithium depletion at the surface. A fraction of the Earth's mass is enough to explain a lithium ratio of 4.7 in the 16 Cygni system. In this case beryllium is not destroyed. Such a process may be frequent in planet-hosting stars and should be studied in other cases in the future.

  12. Adapting hierarchical bidirectional inter prediction on a GPU-based platform for 2D and 3D H.264 video coding

    NASA Astrophysics Data System (ADS)

    Rodríguez-Sánchez, Rafael; Martínez, José Luis; Cock, Jan De; Fernández-Escribano, Gerardo; Pieters, Bart; Sánchez, José L.; Claver, José M.; de Walle, Rik Van

    2013-12-01

    The H.264/AVC video coding standard introduces some improved tools in order to increase compression efficiency. Moreover, the multi-view extension of H.264/AVC, called H.264/MVC, adopts many of them. Among the new features, variable block-size motion estimation is one which contributes to high coding efficiency. Furthermore, it defines a different prediction structure that includes hierarchical bidirectional pictures, outperforming traditional Group of Pictures patterns in both scenarios: single-view and multi-view. However, these video coding techniques have high computational complexity. Several techniques have been proposed in the literature over the last few years which are aimed at accelerating the inter prediction process, but there are no works focusing on bidirectional prediction or hierarchical prediction. In this article, with the emergence of many-core processors or accelerators, a step forward is taken towards an implementation of an H.264/AVC and H.264/MVC inter prediction algorithm on a graphics processing unit. The results show a negligible rate distortion drop with a time reduction of up to 98% for the complete H.264/AVC encoder.

  13. An evaluation of a computer code based on linear acoustic theory for predicting helicopter main rotor noise. [CH-53A and S-76 helicopters

    NASA Technical Reports Server (NTRS)

    Davis, S. J.; Egolf, T. A.

    1980-01-01

    Acoustic characteristics predicted using a recently developed computer code were correlated with measured acoustic data for two helicopter rotors. The analysis, is based on a solution of the Ffowcs-Williams-Hawkings (FW-H) equation and includes terms accounting for both the thickness and loading components of the rotational noise. Computations are carried out in the time domain and assume free field conditions. Results of the correlation show that the Farrassat/Nystrom analysis, when using predicted airload data as input, yields fair but encouraging correlation for the first 6 harmonics of blade passage. It also suggests that although the analysis represents a valuable first step towards developing a truly comprehensive helicopter rotor noise prediction capability, further work remains to be done identifying and incorporating additional noise mechanisms into the code.

  14. Modeling Gas Distribution in Protoplanetary Accretion Disks

    NASA Astrophysics Data System (ADS)

    Kronberg, Martin; Lewis, Josiah; Brittain, Sean

    2010-07-01

    Protoplanetary accretion disks are disks of dust and gas which surround and feed material onto a forming star in the earliest stages of its evolution. One of the most useful methods for studying these disks is near infrared spectroscopy of rovibrational CO emission. This paper presents the methods in which synthetically generated spectra are modeled and fit to spectral data gathered from protoplanetary disks. This paper also discussed the methods in which this code can be improved by modifying the code to run a Monte Carlo analysis of best fit across the CONDOR cluster at Clemson University, thereby allowing for the creation of a catalog of protoplanetary disks with detailed information about them as gathered from the model.

  15. Microwave ice accretion meter

    NASA Technical Reports Server (NTRS)

    Magenheim, Bertram (Inventor); Rocks, James K. (Inventor)

    1984-01-01

    A system for indicating ice thickness and rate of ice thickness growth on surfaces is disclosed. The region to be monitored for ice accretion is provided with a resonant surface waveguide which is mounted flush, below the surface being monitored. A controlled oscillator provides microwave energy via a feed point at a controllable frequency. A detector is coupled to the surface waveguide and is responsive to electrical energy. A measuring device indicates the frequency deviation of the controlled oscillator from a quiescent frequency. A control means is provided to control the frequency of oscillation of the controlled oscillator. In a first, open-loop embodiment, the control means is a shaft operated by an operator. In a second, closed-loop embodiment, the control means is a processor which effects automatic control.

  16. Gas accretion from halos to disks: observations, curiosities, and problems

    NASA Astrophysics Data System (ADS)

    Elmegreen, Bruce G.

    2016-08-01

    Accretion of gas from the cosmic web to galaxy halos and ultimately their disks is a prediction of modern cosmological models but is rarely observed directly or at the full rate expected from star formation. Here we illustrate possible large-scale cosmic HI accretion onto the nearby dwarf starburst galaxy IC10, observed with the VLA and GBT. We also suggest that cosmic accretion is the origin of sharp metallicity drops in the starburst regions of other dwarf galaxies, as observed with the 10-m GTC. Finally, we question the importance of cosmic accretion in normal dwarf irregulars, for which a recent study of their far-outer regions sees no need for, or evidence of, continuing gas buildup.

  17. A computational model for the prediction of jet entrainment in the vicinity of nozzle boattails (The BOAT code)

    NASA Technical Reports Server (NTRS)

    Dash, S. M.; Pergament, H. S.

    1978-01-01

    The basic code structure is discussed, including the overall program flow and a brief description of all subroutines. Instructions on the preparation of input data, definitions of key FORTRAN variables, sample input and output, and a complete listing of the code are presented.

  18. Aeroelastic loads prediction for an arrow wing. Task 3: Evaluation of the Boeing three-dimensional leading-edge vortex code

    NASA Technical Reports Server (NTRS)

    Manro, M. E.

    1983-01-01

    Two separated flow computer programs and a semiempirical method for incorporating the experimentally measured separated flow effects into a linear aeroelastic analysis were evaluated. The three dimensional leading edge vortex (LEV) code is evaluated. This code is an improved panel method for three dimensional inviscid flow over a wing with leading edge vortex separation. The governing equations are the linear flow differential equation with nonlinear boundary conditions. The solution is iterative; the position as well as the strength of the vortex is determined. Cases for both full and partial span vortices were executed. The predicted pressures are good and adequately reflect changes in configuration.

  19. A Database of Supercooled Large Droplet Ice Accretions [Supplement

    NASA Technical Reports Server (NTRS)

    VanZante, Judith Foss

    2007-01-01

    A unique, publicly available database regarding supercooled large droplet (SLD) ice accretions has been developed in NASA Glenn's Icing Research Tunnel. Identical cloud and flight conditions were generated for five different airfoil models. The models chosen represent a variety of aircraft types from the horizontal stabilizer of a large transport aircraft to the wings of regional, business, and general aviation aircraft. In addition to the standard documentation methods of 2D ice shape tracing and imagery, ice mass measurements were also taken. This database will also be used to validate and verify the extension of the ice accretion code, LEWICE, into the SLD realm.

  20. A Database of Supercooled Large Droplet Ice Accretions

    NASA Technical Reports Server (NTRS)

    VanZante, Judith Foss

    2007-01-01

    A unique, publicly available database regarding supercooled large droplet ice accretions has been developed in NASA Glenn's Icing Research Tunnel. Identical cloud and flight conditions were generated for five different airfoil models. The models chosen represent a variety of aircraft types from the horizontal stabilizer of a large trans-port aircraft to the wings of regional, business, and general aviation aircraft. In addition to the standard documentation methods of 2D ice shape tracing and imagery, ice mass measurements were also taken. This database will also be used to validate and verify the extension of the ice accretion code, LEWICE, into the SLD realm.

  1. Predicting radiative heat transfer in thermochemical nonequilibrium flow fields. Theory and user's manual for the LORAN code

    NASA Technical Reports Server (NTRS)

    Chambers, Lin Hartung

    1994-01-01

    The theory for radiation emission, absorption, and transfer in a thermochemical nonequilibrium flow is presented. The expressions developed reduce correctly to the limit at equilibrium. To implement the theory in a practical computer code, some approximations are used, particularly the smearing of molecular radiation. Details of these approximations are presented and helpful information is included concerning the use of the computer code. This user's manual should benefit both occasional users of the Langley Optimized Radiative Nonequilibrium (LORAN) code and those who wish to use it to experiment with improved models or properties.

  2. Predicting radiative heat transfer in thermochemical nonequilibrium flow fields. Theory and user's manual for the LORAN code

    NASA Astrophysics Data System (ADS)

    Chambers, Lin Hartung

    1994-09-01

    The theory for radiation emission, absorption, and transfer in a thermochemical nonequilibrium flow is presented. The expressions developed reduce correctly to the limit at equilibrium. To implement the theory in a practical computer code, some approximations are used, particularly the smearing of molecular radiation. Details of these approximations are presented and helpful information is included concerning the use of the computer code. This user's manual should benefit both occasional users of the Langley Optimized Radiative Nonequilibrium (LORAN) code and those who wish to use it to experiment with improved models or properties.

  3. AGN Accretion Physics: Insights from K2

    NASA Astrophysics Data System (ADS)

    Vogeley, Michael

    We propose to use Kepler K2 mission observations of 1800 supermassive black holes at the centers of galaxies (Active Galactic Nuclei; AGN) to test models for accretion physics, to study the relationship between variability and other AGN properties such as accretion rate, and to guide methods for detecting and classifying AGN in future time-domain surveys. AGN exhibit optical brightness fluctuations on timescales from below an hour up to many years. These fluctuations are determined by the physics of accretion of matter onto black holes from their galactic environment. By observing variability on timescales down to below an hour, Kepler probes the accretion region on length scales that are too small to be directly imaged using conventional telescopes. These data allow us to test competing models for accretion physics that make different predictions for the statistics of variability. Our previous work provides strong evidence that models of AGN variability that work on long timescale data are not adequate to describe the full range of fluctuation timescales probed by Kepler. We will analyze the light curves of 1800 AGN that have been monitored by Kepler during recent and ongoing K2 campaigns. These objects span a large range of luminosity and AGN type, thus allowing study of the relationship between variability and other physical properties. We will characterize the statistics of AGN variability using state-of-the-art methods of time series analysis that are appropriate for quantifying the stochastic behavior of AGN. This analysis builds on our previous work in which we developed and tested new analysis software that extracts the full information content of these light curves and will enable several key outcomes: (1) Measurement of the relationship between types of AGN and their variability. (2) Tests for dependence of variability on accretion rate. (3) Investigation of changes in variability behavior that point to changes in the mode of accretion. (4) Correlations

  4. Geometry Modeling and Grid Generation for "Icing Effects" and "Ice Accretion" Simulations on Airfoils

    NASA Technical Reports Server (NTRS)

    Choo, Yung; Vickerman, Mary; Lee, Ki D.; Thompson, David S.

    2000-01-01

    There are two distinct icing-related problems for airfoils that can be simulated. One is predicting the effects of ice on the aerodynamic performance of airfoils when ice geometry is known ("icing effects" study). The other is simulating ice accretion under specified icing conditions ("ice accretion" simulation). This paper will address development of two different software packages for two-dimensional geometry preparation and grid generation for both "icing effects" and "ice accretion" studies.

  5. Ice accretion and performance degradation calculations with LEWICE/NS

    NASA Technical Reports Server (NTRS)

    Potapczuk, Mark G.; Al-Khalil, Kamel M.; Velazquez, Matthew T.

    1993-01-01

    The LEWICE ice accretion computer code has been extended to include the solution of the two-dimensional Navier-Stokes equations. The code is modular and contains separate stand-alone program elements that create a grid, calculate the flow field parameters, calculate the droplet trajectory paths, determine the amount of ice growth, calculate aeroperformance changes, and plot results. The new elements of the code are described. Calculated results are compared to experiment for several cases, including both ice shape and drag rise.

  6. Ice Accretion and Performance Degradation Calculations with LEWICE/NS

    NASA Technical Reports Server (NTRS)

    Potapczuk, Mark G.; Al-Khalil, Kamel M.; Velazquez, Matthew T.

    1993-01-01

    The LEWICE ice accretion computer code has been extended to include the solution of the two-dimensional Navier-Stokes equations. The code is modular and contains separate stand-alone program elements that create a grid, calculate the flow field parameters, calculate the droplet trajectory paths, determine the amount of ice growth, calculate aeroperformance changes, and plot results. The new elements of the code are described. Calculated results are compared to experiment for several cases, including both ice shape and drag rise.

  7. THE COSMIC BATTERY IN ASTROPHYSICAL ACCRETION DISKS

    SciTech Connect

    Contopoulos, Ioannis; Nathanail, Antonios; Katsanikas, Matthaios

    2015-06-01

    The aberrated radiation pressure at the inner edge of the accretion disk around an astrophysical black hole imparts a relative azimuthal velocity on the electrons with respect to the ions which gives rise to a ring electric current that generates large-scale poloidal magnetic field loops. This is the Cosmic Battery established by Contopoulos and Kazanas in 1998. In the present work we perform realistic numerical simulations of this important astrophysical mechanism in advection-dominated accretion flows, ADAFs. We confirm the original prediction that the inner parts of the loops are continuously advected toward the central black hole and contribute to the growth of the large-scale magnetic field, whereas the outer parts of the loops are continuously diffusing outward through the turbulent accretion flow. This process of inward advection of the axial field and outward diffusion of the return field proceeds all the way to equipartition, thus generating astrophysically significant magnetic fields on astrophysically relevant timescales. We confirm that there exists a critical value of the magnetic Prandtl number between unity and 10 in the outer disk above which the Cosmic Battery mechanism is suppressed.

  8. Accretion shock geometries in the magnetic variables

    NASA Technical Reports Server (NTRS)

    Stockman, H. S.

    1988-01-01

    The first self consistent shock models for the AM Herculis-type systems successfully identified the dominant physical processes and their signatures. These homogenous shock models predict unpolarized, Rayleigh-Jeans optical spectra with sharp cutoffs and rising polarizations as the shocks become optically thin in the ultraviolet. However, the observed energy distributions are generally flat with intermediate polarizations over a broad optical band. These and other observational evidence support a non-homogenous accretion profile which may extend over a considerable fraction of the stellar surface. Both the fundamental assumptions underlying the canonical 1-D shock model and the extension of this model to inhomogenous accretion shocks were identified, for both radial and linear structures. The observational evidence was also examined for tall shocks and little evidence was found for relative shock heights in excess of h/R(1) greater than or equal to 0.1. For several systems, upper limits to the shock height can be obtained from either x ray or optical data. These lie in the region h/R(1) is approximately 0.01 and are in general agreement with the current physical picture for these systems. The quasi-periodic optical variations observed in several magnetic variables may eventually prove to be a major aid in further understanding their accretion shock geometries.

  9. To accrete or not accrete, that is the question

    USGS Publications Warehouse

    von, Huene R.

    1986-01-01

    Along modern convergent margins tectonic processes span a spectrum from accretion to erosion. The process of accretion is generally recognized because it leaves a geologic record, whereas the process of erosion is generally hypothetical because it produces a geologic hiatus. Major conditions that determine the dominance of accretion or erosion at modern convergent margins are: 1) rate and direction of plate convergence, 2) sediment supply and type in the trench, and 3) topography of the subducting ocean floor. Most change in structure has been ascribed to plate motion, but both erosion and accretion are observed along the same convergence margin. Thus sediment supply and topography are probably of equivalent importance to plate motion because both erosion and accretion are observed under constant conditions of plate convergence. The dominance of accretion or erosion at a margin varies with the thickness of trench sediment. In a sediment flooded trench, the proportions of subducted and accreted sediment are commonly established by the position of a decollement along a weak horizon in the sediment section. Thus, the vertical variation of sediment strength and the distribution of horizontal stress are important factors. Once deformation begins, the original sediment strength is decreased by sediment remolding and where sediment thickens rapidly, increases in pore fluid pressure can be pronounced. In sediment-starved trenches, where the relief of the subducting ocean floor is not smoothed over, the front of the margin must respond to the topography subducted as well as that accreted. The hypothesized erosion by the drag of positive features against the underside of the upper plate (a high stress environment) may alternate with erosion due to the collapse of a margin front into voids such as graben (a low stress environment). ?? 1986 Ferdinand Enke Verlag Stuttgart.

  10. Accretion onto Protoplanetary Discs: Implications for Globular Cluster Evolution

    NASA Astrophysics Data System (ADS)

    Wijnen, T. P. G.; Pols, O. R.; Pelupessy, F. I.; Zwart, S. Portegies

    2017-03-01

    In the past decade, observational evidence that Globular Clusters (GCs) harbour multiple stellar populations has grown steadily. These observations are hard to reconcile with the classical picture of star formation in GCs, which approximates them as a single generation of stars. Bastian et al. recently suggested an evolutionary scenario in which a second, chemically distinct, population is formed by the accretion of chemically enriched material onto the protoplanetary disc of low-mass stars in the initial GC population. Using assumptions that represent the (dynamical) conditions in a typical GC, we investigate whether a low-mass star surrounded by a protoplanetary disc can accrete sufficient enriched material to account for the observed abundances in `second generation' stars. We compare the outcome of two different smoothed particle hydrodynamics codes and focus on the lifetime and stability of the disc and on the gas accretion rate onto both the star and the disc.

  11. Accretion in Saturn's F Ring

    NASA Astrophysics Data System (ADS)

    Meinke, B. K.; Esposito, L. W.; Stewart, G.

    2012-12-01

    Saturn's F ring is the solar system's principal natural laboratory for direct observation of accretion and disruption processes. The ring resides in the Roche zone, where tidal disruption competes with self-gravity, which allows us to observe the lifecycle of moonlets. Just as nearby moons create structure at the B ring edge (Esposito et al. 2012) and the Keeler gap (Murray 2007), the F ring "shepherding" moons Prometheus and Pandora stir up ring material and create observably changing structures on timescales of days to decades. In fact, Beurle et al (2010) show that Prometheus makes it possible for "distended, yet gravitationally coherent clumps" to form in the F ring, and Barbara and Esposito (2002) predicted a population of ~1 km bodies in the ring. In addition to the observations over the last three decades, the Cassini Ultraviolet Imaging Spectrograph (UVIS) has detected 27 statistically significant features in 101 occultations by Saturn's F ring since July 2004. Seventeen of those 27 features are associated with clumps of ring material. Two features are opaque in occultation, which makes them candidates for solid objects, which we refer to as Moonlets. The 15 other features partially block stellar signal for 22 m to just over 3.7 km along the radial expanse of the occultation. Upon visual inspection of the occultation profile, these features resemble Icicles, thus we will refer to them as such here. The density enhancements responsible for such signal attenuations are likely due to transient clumping of material, evidence that aggregations of material are ubiquitous in the F ring. Our lengthy observing campaign reveals that Icicles are likely transient clumps, while Moonlets are possible solid objects. Optical depth is an indicator of clumping because more-densely aggregated material blocks more light; therefore, it is natural to imagine moonlets as later evolutionary stage of icicle, when looser clumps of material compact to form a feature that appears

  12. Improvement of Predictive Accuracy on Subchannel Analysis Code (NASCA) for Tight-Lattice Rod Bundle Tests - Optimization of UEDA'S Entrainment Model Parameter and Cross Flow Model Parameters

    SciTech Connect

    Hiromasa Chitose; Akitoshi Hotta; Akira Ohnuki; Ken Fujimura

    2006-07-01

    The Reduced-Moderation Water Reactor (RMWR) is being developed at Japan Atomic Energy Agency and demonstration of the core heat removal performance is one of the most important issues. However, operation of the full-scale bundle experiment is difficult technically because the fuel rod bundle size is larger, which consumes huge electricity. Hence, it is expected to develop an analysis code for simulating RMWR core thermal-hydraulic performance with high accuracy. Subchannel analysis is the most powerful technique to resolve the problem. A subchannel analysis code NASCA (Nuclear-reactor Advanced Sub-Channel Analysis code) has been developed to improve capabilities of analyzing transient two-phase flow phenomena, boiling transition (BT) and post BT, and the NASCA code is applicable on the thermal-hydraulic analysis for the current BWR fuel. In the present study, the prediction accuracy of the NASCA code has been investigated using the reduced-scale rod bundle test data, and its applicability on the RMWR has been improved by optimizing the mechanistic constitutive models. (authors)

  13. Predictive value of vertebral artery extracranial color-coded duplex sonography for ischemic stroke-related vertigo.

    PubMed

    Liou, Li-Min; Lin, Hsiu-Fen; Huang, I-Fang; Chang, Yang-Pei; Lin, Ruey-Tay; Lai, Chiou-Lian

    2013-12-01

    Vertigo can be a major presentation of posterior circulation stroke and can be easily misdiagnosed because of its complicated presentation. We thus prospectively assessed the predictive value of vertebral artery extracranial color-coded duplex sonography (ECCS) for the prediction of ischemic stroke-related vertigo. The inclusion criteria were: (1) a sensation of whirling (vertigo); (2) intractable vertigo for more than 1 hour despite appropriate treatment; and (3) those who could complete cranial magnetic resonance imaging (MRI) and vertebral artery (V2 segment) ECCS studies. Eventually, 76 consecutive participants with vertigo were enrolled from Kaohsiung Municipal Hsiao-Kang Hospital, Kaohsiung, Taiwan between August 2010 and August 2011. Demographic data, neurological symptoms, neurologic examinations, and V2 ECCS were assessed. We chose the parameters of peak systolic velocity (PSV), end diastolic velocity (EDV), PSV/EDV, mean velocity (MV), resistance index (RI), and pulsatility index (PI) to represent the hemodynamics. Values from both sides of V2 segments were averaged. We then calculated the average RI (aRI), average PI (aPI), average PSV (aPSV)/EDV, and average (aMV). Axial and coronal diffusion-weighted MRI findings determined the existence of acute ischemic stroke. We grouped and analyzed participants in two ways (way I and way II analyses) based on the diffusion-weighted MRI findings (to determine whether there was acute stroke) and neurological examinations. Using way I analysis, the "MRI (+)" group had significantly higher impedance (aRI, aPI, and aPSV/EDV ratio) and lower velocity (aPSV, aEDV, and aMV(PSV + EDV/2)), compared to the "MRI (-)" group. The cutoff value/sensitivity/specificity of aPSV, aEDV, aMV, aPI, aRI, and aPSV/EDV between the MRI (+) and MRI (-) groups were 41.15/61.5/66.0 (p = 0.0101), 14.55/69.2/72.0 (p = 0.0003), 29.10/92.1/38.0 (p = 0.0013), 1.07/76.9/64.0 (p = 0.0066), 0.62/76.9/64.0 (p = 0.0076), and 2.69/80.8/66.0 (p = 0

  14. Dynamics of continental accretion.

    PubMed

    Moresi, L; Betts, P G; Miller, M S; Cayley, R A

    2014-04-10

    Subduction zones become congested when they try to consume buoyant, exotic crust. The accretionary mountain belts (orogens) that form at these convergent plate margins have been the principal sites of lateral continental growth through Earth's history. Modern examples of accretionary margins are the North American Cordilleras and southwest Pacific subduction zones. The geologic record contains abundant accretionary orogens, such as the Tasmanides, along the eastern margin of the supercontinent Gondwana, and the Altaïdes, which formed on the southern margin of Laurasia. In modern and ancient examples of long-lived accretionary orogens, the overriding plate is subjected to episodes of crustal extension and back-arc basin development, often related to subduction rollback and transient episodes of orogenesis and crustal shortening, coincident with accretion of exotic crust. Here we present three-dimensional dynamic models that show how accretionary margins evolve from the initial collision, through a period of plate margin instability, to re-establishment of a stable convergent margin. The models illustrate how significant curvature of the orogenic system develops, as well as the mechanism for tectonic escape of the back-arc region. The complexity of the morphology and the evolution of the system are caused by lateral rollback of a tightly arcuate trench migrating parallel to the plate boundary and orthogonally to the convergence direction. We find geological and geophysical evidence for this process in the Tasmanides of eastern Australia, and infer that this is a recurrent and global phenomenon.

  15. Dynamics of continental accretion

    NASA Astrophysics Data System (ADS)

    Moresi, L.; Betts, P. G.; Miller, M. S.; Cayley, R. A.

    2014-04-01

    Subduction zones become congested when they try to consume buoyant, exotic crust. The accretionary mountain belts (orogens) that form at these convergent plate margins have been the principal sites of lateral continental growth through Earth's history. Modern examples of accretionary margins are the North American Cordilleras and southwest Pacific subduction zones. The geologic record contains abundant accretionary orogens, such as the Tasmanides, along the eastern margin of the supercontinent Gondwana, and the Altaïdes, which formed on the southern margin of Laurasia. In modern and ancient examples of long-lived accretionary orogens, the overriding plate is subjected to episodes of crustal extension and back-arc basin development, often related to subduction rollback and transient episodes of orogenesis and crustal shortening, coincident with accretion of exotic crust. Here we present three-dimensional dynamic models that show how accretionary margins evolve from the initial collision, through a period of plate margin instability, to re-establishment of a stable convergent margin. The models illustrate how significant curvature of the orogenic system develops, as well as the mechanism for tectonic escape of the back-arc region. The complexity of the morphology and the evolution of the system are caused by lateral rollback of a tightly arcuate trench migrating parallel to the plate boundary and orthogonally to the convergence direction. We find geological and geophysical evidence for this process in the Tasmanides of eastern Australia, and infer that this is a recurrent and global phenomenon.

  16. NUMERICAL SIMULATIONS OF OPTICALLY THICK ACCRETION ONTO A BLACK HOLE. I. SPHERICAL CASE

    SciTech Connect

    Fragile, P. Chris; Gillespie, Anna; Monahan, Timothy; Rodriguez, Marco; Anninos, Peter

    2012-08-01

    Modeling the radiation generated by accreting matter is an important step toward realistic simulations of black hole accretion disks, especially at high accretion rates. To this end, we have recently added radiation transport to the existing general relativistic magnetohydrodynamic code, Cosmos++. However, before attempting to model radiative accretion disks, we have tested the new code using a series of shock tube and Bondi (spherical inflow) problems. The four radiative shock tube tests, first presented by Farris et al., have known analytic solutions, allowing us to calculate errors and convergence rates for our code. The Bondi problem only has an analytic solution when radiative processes are ignored, but it is pertinent because it is closer to the physics we ultimately want to study. In our simulations, we include Thomson scattering and thermal bremsstrahlung in the opacity, focusing exclusively on the super-Eddington regime. Unlike accretion onto bodies with solid surfaces, super-Eddington accretion onto black holes does not produce super-Eddington luminosity. In our examples, despite accreting at up to 300 times the Eddington rate, our measured luminosity is always several orders of magnitude below Eddington.

  17. Observational Tests of the Picture of Disk Accretion

    NASA Astrophysics Data System (ADS)

    Maccarone, Thomas J.

    2014-09-01

    In this chapter, I present a summary of observational tests of the basic picture of disk accretion. An emphasis is placed on tests relevant to black holes, but many of the fundamental results are drawn from studies of other classes of systems. Evidence is discussed for the basic structures of accretion flows. The cases of systems with and without accretion disks are discussed, as is the evidence that disks actually form. Also discussed are the hot spots where accretion streams impact the disks, and the boundary layers in the inner parts of systems where the accretors are not black holes. The nature of slow, large amplitude variability is discussed. It is shown that some of the key predictions of the classical thermal-viscous ionization instability model for producing outbursts are in excellent agreement with observational results. It is also show that there are systems whose outbursts are extremely difficult to explain without invoking variations in the rate of mass transfer from the donor star into the outer accretion disk, or tidally induced variations in the mass transfer rates. Finally, I briefly discuss recent quasar microlensing measurements which give truly independent constraints on the inner accretion geometry around black holes.

  18. Rethinking Black Hole Accretion Discs

    NASA Astrophysics Data System (ADS)

    Salvesen, Greg

    Accretion discs are staples of astrophysics. Tapping into the gravitational potential energy of the accreting material, these discs are highly efficient machines that produce copious radiation and extreme outflows. While interesting in their own right, accretion discs also act as tools to study black holes and directly influence the properties of the Universe. Black hole X-ray binaries are fantastic natural laboratories for studying accretion disc physics and black hole phenomena. Among many of the curious behaviors exhibited by these systems are black hole state transitions -- complicated cycles of dramatic brightening and dimming. Using X-ray observations with high temporal cadence, we show that the evolution of the accretion disc spectrum during black hole state transitions can be described by a variable disc atmospheric structure without invoking a radially truncated disc geometry. The accretion disc spectrum can be a powerful diagnostic for measuring black hole spin if the effects of the disc atmosphere on the emergent spectrum are well-understood; however, properties of the disc atmosphere are largely unconstrained. Using statistical methods, we decompose this black hole spin measurement technique and show that modest uncertainties regarding the disc atmosphere can lead to erroneous spin measurements. The vertical structure of the disc is difficult to constrain due to our ignorance of the contribution to hydrostatic balance by magnetic fields, which are fundamental to the accretion process. Observations of black hole X-ray binaries and the accretion environments near supermassive black holes provide mounting evidence for strong magnetization. Performing numerical simulations of accretion discs in the shearing box approximation, we impose a net vertical magnetic flux that allows us to effectively control the level of disc magnetization. We study how dynamo activity and the properties of turbulence driven by the magnetorotational instability depend on the

  19. ACCRETING CIRCUMPLANETARY DISKS: OBSERVATIONAL SIGNATURES

    SciTech Connect

    Zhu, Zhaohuan

    2015-01-20

    I calculate the spectral energy distributions of accreting circumplanetary disks using atmospheric radiative transfer models. Circumplanetary disks only accreting at 10{sup –10} M {sub ☉} yr{sup –1} around a 1 M{sub J} planet can be brighter than the planet itself. A moderately accreting circumplanetary disk ( M-dot ∼10{sup −8} M{sub ⊙} yr{sup −1}; enough to form a 10 M{sub J} planet within 1 Myr) around a 1 M{sub J} planet has a maximum temperature of ∼2000 K, and at near-infrared wavelengths (J, H, K bands), this disk is as bright as a late-M-type brown dwarf or a 10 M{sub J} planet with a ''hot start''. To use direct imaging to find the accretion disks around low-mass planets (e.g., 1 M{sub J} ) and distinguish them from brown dwarfs or hot high-mass planets, it is crucial to obtain photometry at mid-infrared bands (L', M, N bands) because the emission from circumplanetary disks falls off more slowly toward longer wavelengths than those of brown dwarfs or planets. If young planets have strong magnetic fields (≳100 G), fields may truncate slowly accreting circumplanetary disks ( M-dot ≲10{sup −9} M{sub ⊙} yr{sup −1}) and lead to magnetospheric accretion, which can provide additional accretion signatures, such as UV/optical excess from the accretion shock and line emission.

  20. Migration of accreting giant planets

    NASA Astrophysics Data System (ADS)

    Crida, A.; Bitsch, B.; Raibaldi, A.

    2016-12-01

    We present the results of 2D hydro simulations of giant planets in proto-planetary discs, which accrete gas at a more or less high rate. First, starting from a solid core of 20 Earth masses, we show that as soon as the runaway accretion of gas turns on, the planet is saved from type I migration : the gap opening mass is reached before the planet is lost into its host star. Furthermore, gas accretion helps opening the gap in low mass discs. Consequently, if the accretion rate is limited to the disc supply, then the planet is already inside a gap and in type II migration. We further show that the type II migration of a Jupiter mass planet actually depends on its accretion rate. Only when the accretion is high do we retrieve the classical picture where no gas crosses the gap and the planet follows the disc spreading. These results impact our understanding of planet migration and planet population synthesis models. The e-poster presenting these results in French can be found here: L'e-poster présentant ces résultats en français est disponible à cette adresse: http://sf2a.eu/semaine-sf2a/2016/posterpdfs/156_179_49.pdf.

  1. Self-consistent evolution of accreting low-mass stars and brown dwarfs

    NASA Astrophysics Data System (ADS)

    Baraffe, I.; Elbakyan, V. G.; Vorobyov, E. I.; Chabrier, G.

    2017-01-01

    We present self-consistent calculations coupling numerical hydrodynamics simulations of collapsing pre-stellar cores and stellar evolution models of accreting objects. We analyse the main impact of consistent accretion history on the evolution and lithium depletion of young low-mass stars and brown dwarfs. These consistent models confirm the generation of a luminosity spread in Herzsprung-Russell diagrams at ages 1-10 Myr. They also confirm that early accretion can produce objects with abnormal Li depletion, as found in a previous study that was based on arbitrary accretion rates. The results strengthen that objects with anomalously high level of Li depletion in young clusters should be extremely rare. We also find that early phases of burst accretion can produce coeval models of similar mass with a range of different Li surface abundances, and in particular with Li-excess compared to the predictions of non-accreting counterparts. This result is due to a subtle competition between the effect of burst accretion and its impact on the central stellar temperature, the growth of the stellar radiative core and the accretion of fresh Li from the accretion disk. Only consistent models could reveal such a subtle combination of effects. This new result could explain the recent, puzzling observations of Li-excess of fast rotators in the young cluster NGC 2264. Present self-consistent accreting models are available in electronic form.

  2. The Evolution of Gas Giant Entropy During Formation by Runaway Accretion

    NASA Astrophysics Data System (ADS)

    Berardo, David; Cumming, Andrew; Marleau, Gabriel-Dominique

    2017-01-01

    We calculate the evolution of gas giant planets during the runaway gas accretion phase of formation, to understand how the luminosity of young giant planets depends on the accretion conditions. We construct steady-state envelope models, and run time-dependent simulations of accreting planets with the code Modules for Experiments in Stellar Astrophysics. We show that the evolution of the internal entropy depends on the contrast between the internal adiabat and the entropy of the accreted material, parametrized by the shock temperature T0 and pressure P0. At low temperatures ({T}0≲ 300–1000 {{K}}, depending on model parameters), the accreted material has a lower entropy than the interior. The convection zone extends to the surface and can drive a high luminosity, leading to rapid cooling and cold starts. For higher temperatures, the accreted material has a higher entropy than the interior, giving a radiative zone that stalls cooling. For {T}0≳ 2000 {{K}}, the surface–interior entropy contrast cannot be accommodated by the radiative envelope, and the accreted matter accumulates with high entropy, forming a hot start. The final state of the planet depends on the shock temperature, accretion rate, and starting entropy at the onset of runaway accretion. Cold starts with L≲ 5× {10}-6 {L}ȯ require low accretion rates and starting entropy, and the temperature of the accreting material needs to be maintained close to the nebula temperature. If instead the temperature is near the value required to radiate the accretion luminosity, 4π {R}2σ {T}04∼ ({GM}\\dot{M}/R), as suggested by previous work on radiative shocks in the context of star formation, gas giant planets form in a hot start with L∼ {10}-4 {L}ȯ .

  3. Terrestrial Planets Accreted Dry

    NASA Astrophysics Data System (ADS)

    Albarede, F.; Blichert-Toft, J.

    2007-12-01

    Plate tectonics shaped the Earth, whereas the Moon is a dry and inactive desert. Mars probably came to rest within the first billion years of its history, and Venus, although internally very active, has a dry inferno for its surface. The strong gravity field of a large planet allows for an enormous amount of gravitational energy to be released, causing the outer part of the planetary body to melt (magma ocean), helps retain water on the planet, and increases the pressure gradient. The weak gravity field and anhydrous conditions prevailing on the Moon stabilized, on top of its magma ocean, a thick buoyant plagioclase lithosphere, which insulated the molten interior. On Earth, the buoyant hydrous phases (serpentines) produced by reactions between the terrestrial magma ocean and the wet impactors received from the outer Solar System isolated the magma and kept it molten for some few tens of million years. The elemental distributions and the range of condensation temperatures show that the planets from the inner Solar System accreted dry. The interior of planets that lost up to 95% of their K cannot contain much water. Foundering of their wet surface material softened the terrestrial mantle and set the scene for the onset of plate tectonics. This very same process may have removed all the water from the surface of Venus 500 My ago and added enough water to its mantle to make its internal dynamics very strong and keep the surface very young. Because of a radius smaller than that of the Earth, not enough water could be drawn into the Martian mantle before it was lost to space and Martian plate tectonics never began. The radius of a planet therefore is the key parameter controlling most of its evolutional features.

  4. RX Geminorum: Photometric Solutions, (Nearly Uniform) Gainer Rotation, Donor Radial Velocity Solution, Non-LTE Accretion Disk Models of Hα Emission Profiles, and Secular Light Curve Changes in the 20th Century

    NASA Astrophysics Data System (ADS)

    Olson, Edward C.; Etzel, Paul B.

    2015-04-01

    We obtained full-orbit Iybvu intermediate-band photometry and CCD spectroscopy of the long-period Algol eclipsing binary RX Geminorum. Photometric solutions using the Wilson-Devinney code give a gainer rotation (hotter, mass-accreting component) about 15 times the synchronous rate. We describe a simple technique to detect departures from uniform rotation of the hotter component. These binaries radiate double-peaked Hα emission from a low-mass accretion disk around the gainer. We used an approximate non-LTE disk code to predict models in fair agreement with observations, except in the far wings of the emission profile, where the star-inner disk boundary layer emits extra radiation. Variations in Hα emission derive from modulations in the transfer rate. A study of times of minima during the 20th century suggests that a perturbing third body is present near RX Gem.

  5. RX GEMINORUM: PHOTOMETRIC SOLUTIONS, (NEARLY UNIFORM) GAINER ROTATION, DONOR RADIAL VELOCITY SOLUTION, NON-LTE ACCRETION DISK MODELS OF Hα EMISSION PROFILES, AND SECULAR LIGHT CURVE CHANGES IN THE 20TH CENTURY

    SciTech Connect

    Olson, Edward C.; Etzel, Paul B. E-mail: pbetzel@mail.sdsu.edu

    2015-04-15

    We obtained full-orbit Iybvu intermediate-band photometry and CCD spectroscopy of the long-period Algol eclipsing binary RX Geminorum. Photometric solutions using the Wilson–Devinney code give a gainer rotation (hotter, mass-accreting component) about 15 times the synchronous rate. We describe a simple technique to detect departures from uniform rotation of the hotter component. These binaries radiate double-peaked Hα emission from a low-mass accretion disk around the gainer. We used an approximate non-LTE disk code to predict models in fair agreement with observations, except in the far wings of the emission profile, where the star–inner disk boundary layer emits extra radiation. Variations in Hα emission derive from modulations in the transfer rate. A study of times of minima during the 20th century suggests that a perturbing third body is present near RX Gem.

  6. The formation of stars by gravitational collapse rather than competitive accretion.

    PubMed

    Krumholz, Mark R; McKee, Christopher F; Klein, Richard I

    2005-11-17

    There are two dominant models of how stars form. Under gravitational collapse, star-forming molecular clumps, of typically hundreds to thousands of solar masses (M(o)), fragment into gaseous cores that subsequently collapse to make individual stars or small multiple systems. In contrast, competitive accretion theory suggests that at birth all stars are much smaller than the typical stellar mass (approximately 0.5M(o)), and that final stellar masses are determined by the subsequent accretion of unbound gas from the clump. Competitive accretion models interpret brown dwarfs and free-floating planets as protostars ejected from star-forming clumps before they have accreted much mass; key predictions of this model are that such objects should lack disks, have high velocity dispersions, form more frequently in denser clumps, and that the mean stellar mass should vary within the Galaxy. Here we derive the rate of competitive accretion as a function of the star-forming environment, based partly on simulation, and determine in what types of environments competitive accretion can occur. We show that no observed star-forming region can undergo significant competitive accretion, and that the simulations that show competitive accretion do so because the assumed properties differ from those determined by observation. Our result shows that stars form by gravitational collapse, and explains why observations have failed to confirm predictions of the competitive accretion model.

  7. Accretion Disks around Young Stars

    NASA Astrophysics Data System (ADS)

    D'Alessio, Paola

    1996-04-01

    A method to calculate the structure and brightness distribution of accretion disks surrounding low and intermediate mass young stars is introduced and discussed. The method includes a realistic treatment of the energy transport mechanisms and disk heating by radiation from external sources. The disk is assumed steady, geometrically thin and in vertical hydrostatic equilibrium. The turbulent viscosity coefficient is expressed using the α prescription and the α parameter and the mass accretion rate are assumed to be constant through the disk. Energy is transported in the vertical direction by: (a) a turbulent flux, computed self-consistently with the viscosity coefficient used to describe the viscous energy dissipation, (b) radiation, using the first moments of the transfer equation, the Eddington approximation, and the Rosseland and Planck Mean Opacities, and (c) convection, taking into account that the convective elements, not necessarily optically thick, lose energy by radiation and turbulent flux. This treatment of the energy transport mechanisms differs from previous work in this field, allowing one to extend, with confidence, the calculation of the disk structure to optically thin regimes. The heating mechanisms considered, which affect the disk's structure and emission, are stellar radiation and a circumstellar envelope which reprocesses and scatters radiation from the star and from the disk itself. In addition to a detailed numerical calculation, an analytical self-consistent formulation of the irradiation of the disk is given. This analytical formulation allows one to understand and extend the numerical results. To evaluate the potential of the method presented in this thesis, a set of models of viscous non-irradiated and irradiated disks are computed. Their predictions are compared with observations of young stellar sources likely to have disks. Given the disk structure and specifying its orientation with respect to the line of sight, the specific

  8. Reynolds-averaged Navier-Stokes based ice accretion for aircraft wings

    NASA Astrophysics Data System (ADS)

    Lashkajani, Kazem Hasanzadeh

    This thesis addresses one of the current issues in flight safety towards increasing icing simulation capabilities for prediction of complex 2D and 3D glaze ice shapes over aircraft surfaces. During the 1980's and 1990's, the field of aero-icing was established to support design and certification of aircraft flying in icing conditions. The multidisciplinary technologies used in such codes were: aerodynamics (panel method), droplet trajectory calculations (Lagrangian framework), thermodynamic module (Messinger model) and geometry module (ice accretion). These are embedded in a quasi-steady module to simulate the time-dependent ice accretion process (multi-step procedure). The objectives of the present research are to upgrade the aerodynamic module from Laplace to Reynolds-Average Navier-Stokes equations solver. The advantages are many. First, the physical model allows accounting for viscous effects in the aerodynamic module. Second, the solution of the aero-icing module directly provides the means for characterizing the aerodynamic effects of icing, such as loss of lift and increased drag. Third, the use of a finite volume approach to solving the Partial Differential Equations allows rigorous mesh and time convergence analysis. Finally, the approaches developed in 2D can be easily transposed to 3D problems. The research was performed in three major steps, each providing insights into the overall numerical approaches. The most important realization comes from the need to develop specific mesh generation algorithms to ensure feasible solutions in very complex multi-step aero-icing calculations. The contributions are presented in chronological order of their realization. First, a new framework for RANS based two-dimensional ice accretion code, CANICE2D-NS, is developed. A multi-block RANS code from U. of Liverpool (named PMB) is providing the aerodynamic field using the Spalart-Allmaras turbulence model. The ICEM-CFD commercial tool is used for the iced airfoil

  9. Characterizing Accreting White Dwarf Pulsators

    NASA Astrophysics Data System (ADS)

    Szkody, Paula; Mukadam, Anjum

    2014-02-01

    Understanding the population, mass distribution, and evolution of accreting white dwarfs impacts the entire realm of binary interaction, including the creation of Type Ia supernovae. We are concentrating on accreting white dwarf pulsators, as the pulsation properties allow us a view of how the accretion affects the interior of the star. Our ground- based photometry on 11 accreting pulsators with corresponding temperatures from HST UV spectra suggest a broad instability strip in the range of 10500 to 16000K. Additionally, tracking a post-outburst heated white dwarf as it cools and crosses the blue edge and resumes pulsation provides an independent method to locate the empirical instability strip. Determining a post-outburst cooling curve yields an estimate of the amount of heating and the accreted mass during the outburst. We request additional photometry of 2 objects that present unique properties: GW Lib which has not yet returned to its pre-outburst pulsation spectrum after 6 yrs, and EQ Lyn which returned to its pre- outburst pulsation after 3 yrs but is now turning on and off without ongoing outbursts. Following the pulsation spectrum changes over stretches of several nights in a row will provide specific knowledge of the stability of the observed modes.

  10. Classical Accreting Pulsars with NICER

    NASA Technical Reports Server (NTRS)

    Wilson-Hodge, Colleen A.

    2014-01-01

    Soft excesses are very common center dot Lx > 1038 erg/s - reprocessing by optically thick material at the inner edge of the accretion disk center dot Lx < 1036 erg/s - photoionized or collisionally heated diffuse gas or thermal emission from the NS surface center dot Lx 1037 erg/s - either or both types of emission center dot NICER observations of soft excesses in bright X-ray pulsars combined with reflection modeling will constrain the ionization state, metalicity and dynamics of the inner edge of the magnetically truncated accretion disk Reflection models of an accretion disk for a hard power law - Strong soft excess below 3 keV from hot X-ray heated disk - For weakly ionized case: strong recombination lines - Are we seeing changes in the disk ionization in 4U1626-26? 13 years of weekly monitoring with RXTE PCA center dot Revealed an unexpectedly large population of Be/X-ray binaries compared to the Milky Way center dot Plotted luminosities are typical of "normal" outbursts (once per orbit) center dot The SMC provides an excellent opportunity to study a homogenous population of HMXBs with low interstellar absorption for accretion disk studies. Monitoring with NICER will enable studies of accretion disk physics in X-ray pulsars center dot The SMC provides a potential homogeneous low-absorption population for this study center dot NICER monitoring and TOO observations will also provide measurements of spinfrequencies, QPOs, pulsed fluxes, and energy spectra.

  11. Understanding Accretion Disks through Three Dimensional Radiation MHD Simulations

    NASA Astrophysics Data System (ADS)

    Jiang, Yan-Fei

    I study the structures and thermal properties of black hole accretion disks in the radiation pressure dominated regime. Angular momentum transfer in the disk is provided by the turbulence generated by the magneto-rotational instability (MRI), which is calculated self-consistently with a recently developed 3D radiation magneto-hydrodynamics (MHD) code based on Athena. This code, developed by my collaborators and myself, couples both the radiation momentum and energy source terms with the ideal MHD equations by modifying the standard Godunov method to handle the stiff radiation source terms. We solve the two momentum equations of the radiation transfer equations with a variable Eddington tensor (VET), which is calculated with a time independent short characteristic module. This code is well tested and accurate in both optically thin and optically thick regimes. It is also accurate for both radiation pressure and gas pressure dominated flows. With this code, I find that when photon viscosity becomes significant, the ratio between Maxwell stress and Reynolds stress from the MRI turbulence can increase significantly with radiation pressure. The thermal instability of the radiation pressure dominated disk is then studied with vertically stratified shearing box simulations. Unlike the previous results claiming that the radiation pressure dominated disk with MRI turbulence can reach a steady state without showing any unstable behavior, I find that the radiation pressure dominated disks always either collapse or expand until we have to stop the simulations. During the thermal runaway, the heating and cooling rates from the simulations are consistent with the general criterion of thermal instability. However, details of the thermal runaway are different from the predictions of the standard alpha disk model, as many assumptions in that model are not satisfied in the simulations. We also identify the key reasons why previous simulations do not find the instability. The thermal

  12. Development of an efficient computer code to solve the time-dependent Navier-Stokes equations. [for predicting viscous flow fields about lifting bodies

    NASA Technical Reports Server (NTRS)

    Harp, J. L., Jr.; Oatway, T. P.

    1975-01-01

    A research effort was conducted with the goal of reducing computer time of a Navier Stokes Computer Code for prediction of viscous flow fields about lifting bodies. A two-dimensional, time-dependent, laminar, transonic computer code (STOKES) was modified to incorporate a non-uniform timestep procedure. The non-uniform time-step requires updating of a zone only as often as required by its own stability criteria or that of its immediate neighbors. In the uniform timestep scheme each zone is updated as often as required by the least stable zone of the finite difference mesh. Because of less frequent update of program variables it was expected that the nonuniform timestep would result in a reduction of execution time by a factor of five to ten. Available funding was exhausted prior to successful demonstration of the benefits to be derived from the non-uniform time-step method.

  13. Development of Reduced-Order Models for Aeroelastic and Flutter Prediction Using the CFL3Dv6.0 Code

    NASA Technical Reports Server (NTRS)

    Silva, Walter A.; Bartels, Robert E.

    2002-01-01

    A reduced-order model (ROM) is developed for aeroelastic analysis using the CFL3D version 6.0 computational fluid dynamics (CFD) code, recently developed at the NASA Langley Research Center. This latest version of the flow solver includes a deforming mesh capability, a modal structural definition for nonlinear aeroelastic analyses, and a parallelization capability that provides a significant increase in computational efficiency. Flutter results for the AGARD 445.6 Wing computed using CFL3D v6.0 are presented, including discussion of associated computational costs. Modal impulse responses of the unsteady aerodynamic system are then computed using the CFL3Dv6 code and transformed into state-space form. Important numerical issues associated with the computation of the impulse responses are presented. The unsteady aerodynamic state-space ROM is then combined with a state-space model of the structure to create an aeroelastic simulation using the MATLAB/SIMULINK environment. The MATLAB/SIMULINK ROM is used to rapidly compute aeroelastic transients including flutter. The ROM shows excellent agreement with the aeroelastic analyses computed using the CFL3Dv6.0 code directly.

  14. Chaotic cold accretion on to black holes in rotating atmospheres

    NASA Astrophysics Data System (ADS)

    Gaspari, M.; Brighenti, F.; Temi, P.

    2015-07-01

    The fueling of black holes is one key problem in the evolution of baryons in the universe. Chaotic cold accretion (CCA) profoundly differs from classic accretion models, as Bondi and thin disc theories. Using 3D high-resolution hydrodynamic simulations, we now probe the impact of rotation on the hot and cold accretion flow in a typical massive galaxy. In the hot mode, with or without turbulence, the pressure-dominated flow forms a geometrically thick rotational barrier, suppressing the black hole accretion rate to ~1/3 of the spherical case value. When radiative cooling is dominant, the gas loses pressure support and quickly circularizes in a cold thin disk; the accretion rate is decoupled from the cooling rate, although it is higher than that of the hot mode. In the more common state of a turbulent and heated atmosphere, CCA drives the dynamics if the gas velocity dispersion exceeds the rotational velocity, i.e., turbulent Taylor number Tat< 1. Extended multiphase filaments condense out of the hot phase via thermal instability (TI) and rain toward the black hole, boosting the accretion rate up to 100 times the Bondi rate (Ṁ• ~ Ṁcool). Initially, turbulence broadens the angular momentum distribution of the hot gas, allowing the cold phase to condense with prograde or retrograde motion. Subsequent chaotic collisions between the cold filaments, clouds, and a clumpy variable torus promote the cancellation of angular momentum, leading to high accretion rates. As turbulence weakens (Tat > 1), the broadening of the distribution and the efficiency of collisions diminish, damping the accretion rate ∝ Tat-1, until the cold disk drives the dynamics. This is exacerbated by the increased difficulty to grow TI in a rotating halo. The simulated sub-Eddington accretion rates cover the range inferred from AGN cavity observations. CCA predicts inner flat X-ray temperature and r-1 density profiles, as recently discovered in M 87 and NGC 3115. The synthetic Hα images

  15. Navier-Stokes analysis of airfoils with leading edge ice accretions

    NASA Technical Reports Server (NTRS)

    Potapczuk, Mark G.

    1993-01-01

    A numerical analysis of the flowfield characteristics and the performance degradation of an airfoil with leading edge ice accretions was performed. The important fluid dynamic processes were identified and calculated. Among these were the leading edge separation bubble at low angles of attack, complete separation on the low pressure surface resulting in premature shell, drag rise due to the ice shape, and the effects of angle of attack on the separated flow field. Comparisons to experimental results were conducted to confirm these calculations. A computer code which solves the Navier-Stokes equations in two dimensions, ARC2D, was used to perform the calculations. A Modified Mixing Length turbulence model was developed to produce grids for several ice shape and airfoil combinations. Results indicate that the ability to predict overall performance characteristics, such as lift and drag, at low angles of attack is excellent. Transition location is important for accurately determining separation bubble shape. Details of the flowfield in and downstream of the separated regions requires some modifications. Calculations for the stalled airfoil indicate periodic shedding of vorticity that was generated aft of the ice accretion. Time averaged pressure values produce results which compare favorably with experimental information. A turbulence model which accounts for the history effects in the flow may be justified.

  16. Hypercritical accretion phase and neutrino expectation in the evolution of Cassiopeia A

    NASA Astrophysics Data System (ADS)

    Fraija, N.; Bernal, C. G.

    2015-07-01

    Cassiopeia A, the youngest supernova remnant known in the Milky Way, is one of the brightest radio sources in the sky and a unique laboratory for supernova physics. Although its compact remnant was discovered in 1999 by the Chandra X-Ray Observatory, nowadays it is widely accepted that a neutron star lies in the centre of this supernova remnant. In addition, new observations suggest that such a neutron star with a low magnetic field and evidence of a carbon atmosphere could have suffered a hypercritical accretion phase seconds after the explosion. Considering this hypercritical accretion episode, we compute the neutrino cooling effect, the number of events and neutrino flavour ratios expected on Hyper-Kamiokande Experiment. The neutrino cooling effect (the emissivity and luminosity of neutrinos) is obtained through numerical simulations performed in a customized version of the FLASH code. Based on these simulations, we forecast that the number of events expected on the Hyper-Kamiokande Experiment is around 3195. Similarly, we estimate the neutrino flavour ratios to be detected considering the neutrino effective potential due to the thermal and magnetized plasma and thanks to the envelope of the star. It is worth noting that our estimates correspond to the only trustworthy method for verifying the hypercritical phase and although this episode took place 330 years ago, at present supernova remnants with these similarities might occur thus confirming our predictions for this phase.

  17. A review of ice accretion data from a model rotor icing test and comparison with theory

    NASA Technical Reports Server (NTRS)

    Britton, Randall K.; Bond, Thomas H.

    1991-01-01

    An experiment was conducted by the Helicopter Icing Consortium (HIC) in the NASA Lewis Icing Research Tunnel (IRT) in which a 1/6 scale fuselage model of a UH-60A Black Hawk helicopter with a generic rotor was subjected to a wide range of icing conditions. The HIC consists of members from NASA, Bell Helicopter, Boeing Helicopter, McDonnell Douglas Helicopters, Sikorsky Aircraft, and Texas A&M University. Data was taken in the form of rotor torque, internal force balance measurements, blade strain gage loading, and two dimensional ice shape tracings. A review of the ice shape data is performed with special attention given to repeatability and correctness of trends in terms of radial variation, rotational speed, icing time, temperature, liquid water content, and volumetric median droplet size. Moreover, an indepth comparison between the experimental data and the analysis of NASA's ice accretion code LEWICE is given. Finally, conclusions are shown as to the quality of the ice accretion data and the predictability of the data base as a whole. Recommendations are also given for improving data taking technique as well as potential future work.

  18. A review of ice accretion data from a model rotor icing test and comparison with theory

    NASA Technical Reports Server (NTRS)

    Britton, Randall K.; Bond, Thomas H.

    1991-01-01

    An experiment was conducted by the Helicopter Icing Consortium (HIC) in the NASA Lewis Icing Research Tunnel (IRT) in which a 1/6 scale fuselage model of a UH-60A Black Hawk helicopter with a generic rotor was subjected to a wide range of icing conditions. The HIC consists of members from NASA, Bell Helicopter, Boeing Helicopter, McDonnell Douglas Helicopters, Sikorsky Aircraft, and Texas A&M University. Data was taken in the form of rotor torque, internal force balance measurements, blade strain gage loading, and two dimensional ice shape tracings. A review of the ice shape data is performed with special attention given to repeatability and correctness of trends in terms of radial variation, rotational speed, icing time, temperature, liquid water content, and volumetric median droplet size. Moreover, an indepth comparison between the experimental data and the analysis of NASA's ice accretion code LEWICE is given. Finally, conclusions are drawn as to the quality of the ice accretion data and the predictability of the data base as a whole. Recommendations are also given for improving data taking technique as well as potential future work.

  19. Population synthesis of accreting white dwarfs - II. X-ray and UV emission

    NASA Astrophysics Data System (ADS)

    Chen, Hai-Liang; Woods, T. E.; Yungelson, L. R.; Gilfanov, M.; Han, Zhanwen

    2015-11-01

    Accreting white dwarfs (WDs) with non-degenerate companions are expected to emit in soft X-rays and the UV, if accreted H-rich material burns stably. They are an important component of the unresolved emission of elliptical galaxies, and their combined ionizing luminosity may significantly influence the optical line emission from warm interstellar medium (ISM). In an earlier paper, we modelled populations of accreting WDs, first generating WD with main-sequence, Hertzsprung gap and red giant companions with the population synthesis code BSE, and then following their evolution with a grid of evolutionary tracks computed with MESA. Now we use these results to estimate the soft X-ray (0.3-0.7 keV), H- and He II-ionizing luminosities of nuclear burning WDs and the number of supersoft X-ray sources for galaxies with different star formation histories. For the starburst case, these quantities peak at ˜1 Gyr and decline by ˜1-3 orders of magnitude by the age of 10 Gyr. For stellar ages of ˜10 Gyr, predictions of our model are consistent with soft X-ray luminosities observed by Chandra in nearby elliptical galaxies and He II 4686 Å/H β line ratio measured in stacked Sloan Digital Sky Survey spectra of retired galaxies, the latter characterizing the strength and hardness of the UV radiation field. However, the soft X-ray luminosity and He II 4686 Å/H β ratio are significantly overpredicted for stellar ages of ≲4-8 Gyr. We discuss various possibilities to resolve this discrepancy and tentatively conclude that it may be resolved by a modification of the typically used criteria of dynamically unstable mass-loss for giant stars.

  20. Light Curves from an MHD Simulation of a Black Hole Accretion Disk

    NASA Astrophysics Data System (ADS)

    Schnittman, Jeremy D.; Krolik, Julian H.; Hawley, John F.

    2006-11-01

    We use a relativistic ray-tracing code to calculate the light curves observed from a global, general relativistic, magnetohydrodynamic simulation of an accretion flow onto a Schwarzschild black hole. We apply three basic emission models to sample different properties of the time-dependent accretion disk. With one of these models, which assumes thermal blackbody emission and free-free absorption, we can predict qualitative features of the high-frequency power spectrum from stellar-mass black holes in the ``thermal dominant'' state. The simulated power spectrum is characterized by a power law of index Γ~3 and total rms fractional variance of <~2% above 10 Hz. For each emission model, we find that the variability amplitude should increase with increasing inclination angle. On the basis of a newly developed formalism for quantifying the significance of quasi-periodic oscillations (QPOs) in simulation data, we find that these simulations are able to identify any such features with (rms/mean) amplitudes >~1% near the orbital frequency at the innermost stable orbit. Initial results indicate the existence of transient QPO peaks with frequency ratios of nearly 2:3 at a 99.9% confidence limit, but they are not generic features, because at any given time they are seen only from certain observer directions. In addition, we present detailed analysis of the azimuthal structure of the accretion disk and the evolution of density perturbations in the inner disk. These ``hot-spot'' structures appear to be roughly self-similar over a range of disk radii, with a single characteristic size δφ=25deg and δr/r=0.3, and typical lifetimes Tl~0.3Torb.

  1. Analysis of the quench propagation along Nb3Sn Rutherford cables with the THELMA code. Part II: Model predictions and comparison with experimental results

    NASA Astrophysics Data System (ADS)

    Manfreda, G.; Bellina, F.; Bajas, H.; Perez, J. C.

    2016-12-01

    To improve the technology of the new generation of accelerator magnets, prototypes are being manufactured and tested in several laboratories. In parallel, many numerical analyses are being carried out to predict the magnets behaviour and interpret the experimental results. This paper focuses on the quench propagation velocity, which is a crucial parameter as regards the energy dissipation along the magnet conductor. The THELMA code, originally developed for cable-in-conduit conductors for fusion magnets, has been used to study such quench propagation. To this purpose, new code modules have been added to describe the Rutherford cable geometry, the material non-linear thermal properties and to describe the thermal conduction problem in transient regime. THELMA can describe the Rutherford cable at the strand level, modelling both the electrical and thermal contact resistances between strands and enabling the analysis of the effects of local hot spots and quench heaters. This paper describes the model application to a sample of Short Model Coil tested at CERN: a comparison is made between the experimental results and the model prediction, showing a good agreement. A comparison is also made with the prediction of the most common analytical models, which give large inaccuracies when dealing with low n-index cables like Nb3Sn cables.

  2. The Standing Accretion Shock Instability: Enhanced Growth in Rotating Progenitors

    NASA Astrophysics Data System (ADS)

    Blondin, John M.; Gipson, Emily; Harris, Sawyer; Mezzacappa, Anthony

    2017-02-01

    We investigate the effect of progenitor rotation on the standing accretion shock instability (SASI) using two- and three-dimensional hydrodynamic simulations. We find that the growth rate of the SASI is a near-linearly increasing function of the specific angular momentum in the accreting gas. Both the growth rate and the angular frequency in the two-dimensional model with cylindrical geometry agree well with previous linear stability analyses. When excited by very small random perturbations, a one-armed spiral mode dominates the small rotation rates predicted by current stellar evolution models, while progressively higher-order modes are seen as the specific angular momentum increases.

  3. Eclipse Mapping of Accretion Discs

    NASA Astrophysics Data System (ADS)

    Baptista, R.

    The eclipse mapping method is an inversion technique that makes use of the information contained in eclipse light curves to probe the structure, the spectrum and the time evolution of accretion discs. In this review I present the basics of the method and discuss its different implementations. I summarize the most important results obtained to date and discuss how they have helped to improve our understanding of accretion physics, from testing the theoretical radial brightness temperature distribution and measuring mass accretion rates to showing the evolution of the structure of a dwarf novae disc throughout its outburst cycle, from isolating the spectrum of a disc wind to revealing the geometry of disc spiral shocks. I end with an outline of the future prospects.

  4. Formation of primordial supermassive stars by rapid mass accretion

    SciTech Connect

    Hosokawa, Takashi; Yoshida, Naoki; Yorke, Harold W.; Inayoshi, Kohei; Omukai, Kazuyuki E-mail: hosokwtk@gmail.com

    2013-12-01

    Supermassive stars (SMSs) forming via very rapid mass accretion ( M-dot {sub ∗}≳0.1 M{sub ⊙} yr{sup −1}) could be precursors of supermassive black holes observed beyond a redshift of about six. Extending our previous work, here we study the evolution of primordial stars growing under such rapid mass accretion until the stellar mass reaches 10{sup 4–5} M {sub ☉}. Our stellar evolution calculations show that a star becomes supermassive while passing through the 'supergiant protostar' stage, whereby the star has a very bloated envelope and a contracting inner core. The stellar radius increases monotonically with the stellar mass until ≅ 100 AU for M {sub *} ≳ 10{sup 4} M {sub ☉}, after which the star begins to slowly contract. Because of the large radius, the effective temperature is always less than 10{sup 4} K during rapid accretion. The accreting material is thus almost completely transparent to the stellar radiation. Only for M {sub *} ≳ 10{sup 5} M {sub ☉} can stellar UV feedback operate and disturb the mass accretion flow. We also examine the pulsation stability of accreting SMSs, showing that the pulsation-driven mass loss does not prevent stellar mass growth. Observational signatures of bloated SMSs should be detectable with future observational facilities such as the James Webb Space Telescope. Our results predict that an inner core of the accreting SMS should suffer from the general relativistic instability soon after the stellar mass exceeds 10{sup 5} M {sub ☉}. An extremely massive black hole should form after the collapse of the inner core.

  5. Improved NASA-ANOPP Noise Prediction Computer Code for Advanced Subsonic Propulsion Systems. Volume 2; Fan Suppression Model Development

    NASA Technical Reports Server (NTRS)

    Kontos, Karen B.; Kraft, Robert E.; Gliebe, Philip R.

    1996-01-01

    The Aircraft Noise Predication Program (ANOPP) is an industry-wide tool used to predict turbofan engine flyover noise in system noise optimization studies. Its goal is to provide the best currently available methods for source noise prediction. As part of a program to improve the Heidmann fan noise model, models for fan inlet and fan exhaust noise suppression estimation that are based on simple engine and acoustic geometry inputs have been developed. The models can be used to predict sound power level suppression and sound pressure level suppression at a position specified relative to the engine inlet.

  6. Aerodynamics and thermal physics of helicopter ice accretion

    NASA Astrophysics Data System (ADS)

    Han, Yiqiang

    Ice accretion on aircraft introduces significant loss in airfoil performance. Reduced lift-to- drag ratio reduces the vehicle capability to maintain altitude and also limits its maneuverability. Current ice accretion performance degradation modeling approaches are calibrated only to a limited envelope of liquid water content, impact velocity, temperature, and water droplet size; consequently inaccurate aerodynamic performance degradations are estimated. The reduced ice accretion prediction capabilities in the glaze ice regime are primarily due to a lack of knowledge of surface roughness induced by ice accretion. A comprehensive understanding of the ice roughness effects on airfoil heat transfer, ice accretion shapes, and ultimately aerodynamics performance is critical for the design of ice protection systems. Surface roughness effects on both heat transfer and aerodynamic performance degradation on airfoils have been experimentally evaluated. Novel techniques, such as ice molding and casting methods and transient heat transfer measurement using non-intrusive thermal imaging methods, were developed at the Adverse Environment Rotor Test Stand (AERTS) facility at Penn State. A novel heat transfer scaling method specifically for turbulent flow regime was also conceived. A heat transfer scaling parameter, labeled as Coefficient of Stanton and Reynolds Number (CSR = Stx/Rex --0.2), has been validated against reference data found in the literature for rough flat plates with Reynolds number (Re) up to 1x107, for rough cylinders with Re ranging from 3x104 to 4x106, and for turbine blades with Re from 7.5x105 to 7x106. This is the first time that the effect of Reynolds number is shown to be successfully eliminated on heat transfer magnitudes measured on rough surfaces. Analytical models for ice roughness distribution, heat transfer prediction, and aerodynamics performance degradation due to ice accretion have also been developed. The ice roughness prediction model was

  7. Episodic Accretion in Young Stars

    NASA Astrophysics Data System (ADS)

    Audard, M.; Ábrahám, P.; Dunham, M. M.; Green, J. D.; Grosso, N.; Hamaguchi, K.; Kastner, J. H.; Kóspál, Á.; Lodato, G.; Romanova, M. M.; Skinner, S. L.; Vorobyov, E. I.; Zhu, Z.

    In the last 20 years, the topic of episodic accretion has gained significant interest in the star-formation community. It is now viewed as a common, although still poorly understood, phenomenon in low-mass star formation. The FU Orionis objects (FUors) are long-studied examples of this phenomenon. FU Orionis objects are believed to undergo accretion outbursts during which the accretion rate rapidly increases from typically 10-7 to a few 10-4 M⊙ yr-1, and remains elevated over several decades or more. EXors, a loosely defined class of pre-main-sequence stars, exhibit shorter and repetitive outbursts, associated with lower accretion rates. The relationship between the two classes, and their connection to the standard pre-main-sequence evolutionary sequence, is an open question: Do they represent two distinct classes, are they triggered by the same physical mechanism, and do they occur in the same evolutionary phases? Over the past couple of decades, many theoretical and numerical models have been developed to explain the origin of FUor and EXor outbursts. In parallel, such accretion bursts have been detected at an increasing rate, and as observing techniques improve, each individual outburst is studied in increasing detail. We summarize key observations of pre-main-sequence star outbursts, and review the latest thinking on outburst triggering mechanisms, the propagation of outbursts from star/disk to disk/jet systems, the relation between classical EXors and FUors, and newly discovered outbursting sources — all of which shed new light on episodic accretion. We finally highlight some of the most promising directions for this field in the near- and long-term.

  8. The structure and appearance of winds from supercritical accretion disks. I - Numerical models

    NASA Technical Reports Server (NTRS)

    Meier, D. L.

    1979-01-01

    Equations for the structure and appearance of supercritical accretion disks and the radiation-driven winds which emanate from them are derived and solved by a steady-state hydrodynamic computer code with a relaxation technique used in stellar structure problems. The present model takes into account the mass of the accreting star, the total accretion rate, a generalization of the disk alpha parameter which accounts for heating by processes in addition to viscosity, and the ratio of the total luminosity to the Eddington luminosity. Solutions indicate that for accretion onto a hard-surfaced star, steady, optically thick winds result for even slightly supercritical accretion, and the object will appear as a supergiant star with a high mass loss rate and a nonblackbody spectrum. Winds from black hole accretion disks are expected to depend on the form of the accretion interior to the critical radius, possibly consisting of no ejection at all, a wind similar to that of a hard-surfaced star, or a column of material ejected from a hole in the accretion disk.

  9. Analytical ice shape predictions for flight in natural icing conditions

    NASA Technical Reports Server (NTRS)

    Berkowitz, Brian M.; Riley, James T.

    1988-01-01

    LEWICE is an analytical ice prediction code that has been evaluated against icing tunnel data, but on a more limited basis against flight data. Ice shapes predicted by LEWICE is compared with experimental ice shapes accreted on the NASA Lewis Icing Research Aircraft. The flight data selected for comparison includes liquid water content recorded using a hot wire device and droplet distribution data from a laser spectrometer; the ice shape is recorded using stereo photography. The main findings are as follows: (1) An equivalent sand grain roughness correlation different from that used for LEWICE tunnel comparisons must be employed to obtain satisfactory results for flight; (2) Using this correlation and making no other changes in the code, the comparisons to ice shapes accreted in flight are in general as good as the comparisons to ice shapes accreted in the tunnel (as in the case of tunnel ice shapes, agreement is least reliable for large glaze ice shapes at high angles of attack); (3) In some cases comparisons can be somewhat improved by utilizing the code so as to take account of the variation of parameters such as liquid water content, which may vary significantly in flight.

  10. BAG: A code for predicting the performance of a gas bag impact attenuation system for the PATHFINDER lander

    SciTech Connect

    Cole, J.K.; Waye, D.E.

    1993-11-01

    The National Aeronautics and Space Administration (NASA) is planning to launch a network of scientific probes to Mars beginning in late 1996. The precursor to this network will be PATHFINDER. Decelerating PATHFINDER from the high speed of its approach to Mars will require the use of several deceleration techniques working in series. The Jet Propulsion Laboratory (JPL) has proposed that gas bags be used to cushion the payload`s ground impact on Mars. This report presents the computer code, BAG, which has been developed to calculate the pneumatic performance of gas bag impact attenuators and the one-dimensional rigid-body dynamic performance of a payload during ground impact.

  11. Accretion, radial flows and abundance gradients in spiral galaxies

    NASA Astrophysics Data System (ADS)

    Pezzulli, Gabriele; Fraternali, Filippo

    2016-01-01

    The metal-poor gas continuously accreting on to the discs of spiral galaxies is unlikely to arrive from the intergalactic medium (IGM) with exactly the same rotation velocity as the galaxy itself and even a small angular momentum mismatch inevitably drives radial gas flows within the disc, with significant consequences to galaxy evolution. Here, we provide some general analytic tools to compute accretion profiles, radial gas flows and abundance gradients in spiral galaxies as a function of the angular momentum of the accreting material. We generalize existing solutions for the decomposition of the gas flows, required to reproduce the structural properties of galaxy discs, into direct accretion from the IGM and a radial mass flux within the disc. We then solve the equation of metallicity evolution in the presence of radial gas flows with a novel method, based on characteristic lines, which greatly reduces the numerical demand on the computation and sheds light on the crucial role of boundary conditions on the abundance profiles predicted by theoretical models. We also discuss how structural and chemical constraints can be combined to disentangle the contributions of inside-out growth and radial flows in the development of abundance gradients in spiral galaxies. Illustrative examples are provided throughout with parameters plausible for the Milky Way. We find that the material accreting on the Milky Way should rotate at 70-80 per cent of the rotational velocity of the disc, in agreement with previous estimates.

  12. Constraining Accreting Binary Populations in Normal Galaxies

    NASA Astrophysics Data System (ADS)

    Lehmer, Bret; Hornschemeier, A.; Basu-Zych, A.; Fragos, T.; Jenkins, L.; Kalogera, V.; Ptak, A.; Tzanavaris, P.; Zezas, A.

    2011-01-01

    X-ray emission from accreting binary systems (X-ray binaries) uniquely probe the binary phase of stellar evolution and the formation of compact objects such as neutron stars and black holes. A detailed understanding of X-ray binary systems is needed to provide physical insight into the formation and evolution of the stars involved, as well as the demographics of interesting binary remnants, such as millisecond pulsars and gravitational wave sources. Our program makes wide use of Chandra observations and complementary multiwavelength data sets (through, e.g., the Spitzer Infrared Nearby Galaxies Survey [SINGS] and the Great Observatories Origins Deep Survey [GOODS]), as well as super-computing facilities, to provide: (1) improved calibrations for correlations between X-ray binary emission and physical properties (e.g., star-formation rate and stellar mass) for galaxies in the local Universe; (2) new physical constraints on accreting binary processes (e.g., common-envelope phase and mass transfer) through the fitting of X-ray binary synthesis models to observed local galaxy X-ray binary luminosity functions; (3) observational and model constraints on the X-ray evolution of normal galaxies over the last 90% of cosmic history (since z 4) from the Chandra Deep Field surveys and accreting binary synthesis models; and (4) predictions for deeper observations from forthcoming generations of X-ray telesopes (e.g., IXO, WFXT, and Gen-X) to provide a science driver for these missions. In this talk, we highlight the details of our program and discuss recent results.

  13. Variable Protostellar Accretion with Episodic Bursts

    NASA Astrophysics Data System (ADS)

    Vorobyov, Eduard I.; Basu, Shantanu

    2015-06-01

    We present the latest development of the disk gravitational instability and fragmentation model, originally introduced by us to explain episodic accretion bursts in the early stages of star formation. Using our numerical hydrodynamics model with improved disk thermal balance and star-disk interaction, we computed the evolution of protostellar disks formed from the gravitational collapse of prestellar cores. In agreement with our previous studies, we find that cores of higher initial mass and angular momentum produce disks that are more favorable to gravitational instability and fragmentation, while a higher background irradiation and magnetic fields moderate the disk tendency to fragment. The protostellar accretion in our models is time-variable, thanks to the nonlinear interaction between different spiral modes in the gravitationally unstable disk, and can undergo episodic bursts when fragments migrate onto the star owing to the gravitational interaction with other fragments or spiral arms. Most bursts occur in the partly embedded Class I phase, with a smaller fraction taking place in the deeply embedded Class 0 phase and a few possible bursts in the optically visible Class II phase. The average burst duration and mean luminosity are found to be in good agreement with those inferred from observations of FUors. The model predicts the existence of two types of bursts: the isolated ones, showing well-defined luminosity peaks separated with prolonged periods (˜ {{10}4} yr) of quiescent accretion, and clustered ones, demonstrating several bursts occurring one after another during just a few hundred years. Finally, we estimate that 40%-70% of the star-forming cores can display bursts after forming a star-disk system.

  14. Accretion in the Roche zone: Coexistence of rings and ring moons.

    NASA Astrophysics Data System (ADS)

    Canup, Robin M.; Esposito, Larry W.

    1995-02-01

    Traditional accretion simulations predict rapid accumulation of ring debris into single satellites, while most theories of ring formation dismiss any accretion within the classical Roche limit. The former contradicts the continued presence of planetary rings, while the latter fails to adequately account for the many small satellites observed within ring systems. The coexistence of rings and small satellites thus challenges the premise of a strict boundary between accreting and nonaccreting regions. We have developed an accretion model designed to better examine accumulation processes in the dynamically transitional regime of outer planetary rings. We utilize "three-body" capture criteria, motivated by the work of Ohtsuki (1993 Icarus 106, 228-246), to account for the effects of strong tidal forces on accretion. Our findings indicate that tidally modified accretion occurs in a relatively broad range of orbital radii surrounding the classical Roche limit. Tidally modified accretion has a very unique character: for a given particle density, only bodies which differ greatly in mass can remain gravitationally bound, as like-sized bodies overflow their mutual Hill sphere. We find that this constraint greatly limits the degree of accretional growth and prevents runaway accretion near the Roche limit. Numerical simulations show that through the course of tidally modified accretion, a fragmentation-produced debris distribution evolves into a bimodal population, with one element consisting of a swarm of small, high-velocity bodies and the other composed of a small number of large "moonlets" on fairly circular orbits. The latter are precluded from accreting with one another due to the tidal influences of the planet. Tidally modified accretion thus offers a natural explanation for the formation of systems of coexisting rings and ringmoons from disrupted parent bodies.

  15. ENHANCED ACCRETION RATES OF STARS ON SUPERMASSIVE BLACK HOLES BY STAR-DISK INTERACTIONS IN GALACTIC NUCLEI

    SciTech Connect

    Just, Andreas; Yurin, Denis; Makukov, Maxim; Berczik, Peter; Omarov, Chingis; Spurzem, Rainer; Vilkoviskij, Emmanuil Y.

    2012-10-10

    We investigate the dynamical interaction of a central star cluster surrounding a supermassive black hole (SMBH) and a central accretion disk (AD). The dissipative force acting on stars in the disk leads to an enhanced mass flow toward the SMBH and to an asymmetry in the phase space distribution due to the rotating AD. The AD is considered as a stationary Keplerian rotating disk, which is vertically extended in order to employ a fully self-consistent treatment of stellar dynamics including the dissipative force originating from star-gas ram pressure effects. The stellar system is treated with a direct high-accuracy N-body integration code. A star-by-star representation, desirable in N-body simulations, cannot be extended to real particle numbers yet. Hence, we carefully discuss the scaling behavior of our model with regard to particle number and tidal accretion radius. The main idea is to find a family of models for which the ratio of two-body relaxation time and dissipation time (for kinetic energy of stellar orbits) is constant, which then allows us to extrapolate our results to real parameters of galactic nuclei. Our model is derived from basic physical principles and as such it provides insight into the role of physical processes in galactic nuclei, but it should be regarded as a first step toward more realistic and more comprehensive simulations. Nevertheless, the following conclusions appear to be robust: the star accretion rate onto the AD and subsequently onto the SMBH is enhanced by a significant factor compared to purely stellar dynamical systems neglecting the disk. This process leads to enhanced fueling of central disks in active galactic nuclei (AGNs) and to an enhanced rate of tidal stellar disruptions. Such disruptions may produce electromagnetic counterparts in the form of observable X-ray flares. Our models improve predictions for their rates in quiescent galactic nuclei. We do not yet model direct stellar collisions in the gravitational potential

  16. Acoustic Predictions of Manned and Unmanned Rotorcraft Using the Comprehensive Analytical Rotorcraft Model for Acoustics (CARMA) Code System

    NASA Technical Reports Server (NTRS)

    Boyd, D. Douglas, Jr.; Burley, Casey L.; Conner, David A.

    2005-01-01

    The Comprehensive Analytical Rotorcraft Model for Acoustics (CARMA) is being developed under the Quiet Aircraft Technology Project within the NASA Vehicle Systems Program. The purpose of CARMA is to provide analysis tools for the design and evaluation of efficient low-noise rotorcraft, as well as support the development of safe, low-noise flight operations. The baseline prediction system of CARMA is presented and current capabilities are illustrated for a model rotor in a wind tunnel, a rotorcraft in flight and for a notional coaxial rotor configuration; however, a complete validation of the CARMA system capabilities with respect to a variety of measured databases is beyond the scope of this work. For the model rotor illustration, predicted rotor airloads and acoustics for a BO-105 model rotor are compared to test data from HART-II. For the flight illustration, acoustic data from an MD-520N helicopter flight test, which was conducted at Eglin Air Force Base in September 2003, are compared with CARMA full vehicle flight predictions. Predicted acoustic metrics at three microphone locations are compared for limited level flight and descent conditions. Initial acoustic predictions using CARMA for a notional coaxial rotor system are made. The effect of increasing the vertical separation between the rotors on the predicted airloads and acoustic results are shown for both aerodynamically non-interacting and aerodynamically interacting rotors. The sensitivity of including the aerodynamic interaction effects of each rotor on the other, especially when the rotors are in close proximity to one another is initially examined. The predicted coaxial rotor noise is compared to that of a conventional single rotor system of equal thrust, where both are of reasonable size for an unmanned aerial vehicle (UAV).

  17. Assessment of a 3-D boundary layer code to predict heat transfer and flow losses in a turbine

    NASA Technical Reports Server (NTRS)

    Vatsa, V. N.

    1983-01-01

    The prediction of the complete flow field in a turbine passage is an extremely difficult task due to the complex three dimensional pattern which contains separation and attachment lines, a saddle point and horseshoe vortex. Whereas, in principle such a problem can be solved using full Navier-Stokes equations, in reality methods based on a Navier-Stokes solution procedure encounter difficulty in accurately predicting surface quantities (e.g., heat transfer) due to grid limitations imposed by the speed and size of the existing computers. On the other hand the overall problem is strongly three dimensional and too complex to be analyzed by the current design methods based on inviscid and/or viscous strip theories. Thus there is a strong need for enhancing the current prediction techniques through inclusion of 3-D viscous effects. A potentially simple and cost effective way to achieve this is to use a prediction method based on three dimensional boundary layer (3-DBL) theory. The major objective of this program is to assess the applicability of such a 3-DBL approach for the prediction of heat loads, boundary layer growth, pressure losses and streamline skewing in critical areas of a turbine passage. A brief discussion of the physical problem addressed here along with the overall approach is presented.

  18. BIODOSE: a code for predicting the dose to man from radionuclides released from underground nuclear waste repositories

    SciTech Connect

    Bonner, N.A.; Ng, Y.C.

    1980-03-01

    The BIODOSE computer program simulates the environmental transport of radionuclides released to surface water and predicts the resulting dosage to humans. This report describes the program and discusses its use in the evaluation of nuclear waste repositories. The methods used to estimate dose are examined critically, and the most important parameters in each stage of the calculations are identified as an aid in planning for measurements in the field. Dose predictions from releases of nuclear waste to a large northwestern river (the baseline river) are presented to point out the nuclides, compartments and pathways that contribute most to the hazard as a function of waste storage time. Predictions for five other water systems are presented to identify the most important system parameters that determine the concentrations of individual nuclides in compartments and the resultant dose. The uncertainties in the biological parameters for dose prediction are identified, and changes in current values are suggested. Various ways of reporting dose estimates for radiological safety assessments are discussed. Additional work needed to improve the dose predictions from BIODOSE and specific areas and steps to improve our capabilities to assess the environmental transport of nuclides released from nuclear waste repositories and the resultant dose to man are suggested.

  19. Fast Coding Unit Encoding Mechanism for Low Complexity Video Coding

    PubMed Central

    Wu, Yueying; Jia, Kebin; Gao, Guandong

    2016-01-01

    In high efficiency video coding (HEVC), coding tree contributes to excellent compression performance. However, coding tree brings extremely high computational complexity. Innovative works for improving coding tree to further reduce encoding time are stated in this paper. A novel low complexity coding tree mechanism is proposed for HEVC fast coding unit (CU) encoding. Firstly, this paper makes an in-depth study of the relationship among CU distribution, quantization parameter (QP) and content change (CC). Secondly, a CU coding tree probability model is proposed for modeling and predicting CU distribution. Eventually, a CU coding tree probability update is proposed, aiming to address probabilistic model distortion problems caused by CC. Experimental results show that the proposed low complexity CU coding tree mechanism significantly reduces encoding time by 27% for lossy coding and 42% for visually lossless coding and lossless coding. The proposed low complexity CU coding tree mechanism devotes to improving coding performance under various application conditions. PMID:26999741

  20. Fast Coding Unit Encoding Mechanism for Low Complexity Video Coding.

    PubMed

    Gao, Yuan; Liu, Pengyu; Wu, Yueying; Jia, Kebin; Gao, Guandong

    2016-01-01

    In high efficiency video coding (HEVC), coding tree contributes to excellent compression performance. However, coding tree brings extremely high computational complexity. Innovative works for improving coding tree to further reduce encoding time are stated in this paper. A novel low complexity coding tree mechanism is proposed for HEVC fast coding unit (CU) encoding. Firstly, this paper makes an in-depth study of the relationship among CU distribution, quantization parameter (QP) and content change (CC). Secondly, a CU coding tree probability model is proposed for modeling and predicting CU distribution. Eventually, a CU coding tree probability update is proposed, aiming to address probabilistic model distortion problems caused by CC. Experimental results show that the proposed low complexity CU coding tree mechanism significantly reduces encoding time by 27% for lossy coding and 42% for visually lossless coding and lossless coding. The proposed low complexity CU coding tree mechanism devotes to improving coding performance under various application conditions.

  1. Accretion physics: It's not U, it's B

    NASA Astrophysics Data System (ADS)

    Miller, Jon

    2017-03-01

    Black holes grow by accreting mass, but the process is messy and redistributes gas and energy into their environments. New evidence shows that magnetic processes mediate both the accretion and ejection of matter.

  2. A statistical framework to predict functional non-coding regions in the human genome through integrated analysis of annotation data.

    PubMed

    Lu, Qiongshi; Hu, Yiming; Sun, Jiehuan; Cheng, Yuwei; Cheung, Kei-Hoi; Zhao, Hongyu

    2015-05-27

    Identifying functional regions in the human genome is a major goal in human genetics. Great efforts have been made to functionally annotate the human genome either through computational predictions, such as genomic conservation, or high-throughput experiments, such as the ENCODE project. These efforts have resulted in a rich collection of functional annotation data of diverse types that need to be jointly analyzed for integrated interpretation and annotation. Here we present GenoCanyon, a whole-genome annotation method that performs unsupervised statistical learning using 22 computational and experimental annotations thereby inferring the functional potential of each position in the human genome. With GenoCanyon, we are able to predict many of the known functional regions. The ability of predicting functional regions as well as its generalizable statistical framework makes GenoCanyon a unique and powerful tool for whole-genome annotation. The GenoCanyon web server is available at http://genocanyon.med.yale.edu.

  3. Fueling galaxy growth through gas accretion in cosmological simulations

    NASA Astrophysics Data System (ADS)

    Nelson, Dylan Rubaloff

    Despite significant advances in the numerical modeling of galaxy formation and evolution, it is clear that a satisfactory theoretical picture of how galaxies acquire their baryons across cosmic time remains elusive. In this thesis we present a computational study which seeks to address the question of how galaxies get their gas. We make use of new, more robust simulation techniques and describe the first investigations of cosmological gas accretion using a moving-mesh approach for solving the equations of continuum hydrodynamics. We focus first on a re-examination of past theoretical conclusions as to the relative importance of different accretion modes for galaxy growth. We study the rates and nature of gas accretion at z=2, comparing our new simulations run with the Arepo code to otherwise identical realizations run with the smoothed particle hydrodynamics code Gadget. We find significant physical differences in the thermodynamic history of accreted gas, explained in terms of numerical inaccuracies in SPH. In contrast to previous results, we conclude that hot mode accretion generally dominates galaxy growth, while cold gas filaments experience increased heating and disruption. Next, we consider the impact of feedback on our results, including models for galactic-scale outflows driven by stars as well as the energy released from supermassive black holes. We find that feedback strongly suppresses the inflow of "smooth" mode gas at all redshifts, regardless of its temperature history. Although the geometry of accretion at the virial radius is largely unmodified, strong galactic-fountain recycling motions dominate the inner halo. We measure a shift in the characteristic timescale of accretion, and discuss implications for semi-analytical models of hot halo gas cooling. To overcome the resolution limitations of cosmological volumes, we simulate a suite of eight individual 1012 solar mass halos down to z=2. We quantify the thermal and dynamical structure of the gas in

  4. Theoretical Researches on Hot Accretion Flows around Black Holes

    NASA Astrophysics Data System (ADS)

    Xie, F. G.

    2010-10-01

    efficiency should be significantly increased, due to the strong global Compton scattering in hot accretion flows; (3) the global Compton heating effect in the outer regions may cause the "oscillation" of the accretion flow in AGN between active and non-active phases. The duration of the active phase approximately equals to the accretion timescale at the virial radius, while the duration of the non-active phase may be comparable to the cooling timescale at the virial radius. Subsequently in Chapter 4, the more accurate Monte Carlo simulations are used to uniformly deal with the Compton scattering process and explore the Compton cooling effect in the inner regions (r≲300rs) of the hot accretion flows. The results by using this approach are consistent with those in Chapter 3. Besides that, it is found that the radiative efficiency is increased by a factor of 5 at 0.05dot{M}_{Edd}, much higher than the expected; the spectral shape is also modified due to the existence of global Comptonization. We then discuss the contribution of the outflowing material to the observed spectrum. We find that the temperature and column density of outflow can partly help to explain one of the major difficulties in accretion fields, i.e., the temperature and optical depth from observational fittings deviate from what are predicted by ADAF theories. We also confirm the previous analysis (Yuan 2001, 2003) that the inner regions of hot accretion flow is thermally instable. One consequence is that the flow will collapse to form a thin disk. The other possibility predicted by LHAF is that the hot accretion flow will be filled with cold clumps/clouds. Disappointedly, we cannot rule out any of these two possibilities at present. The latter, namely two-phase accretion mode, could explain the steep power-law state in XRBs. In Chapter 5, a brief discussion of conceived researches related to this thesis is presented.

  5. Perturbation growth in accreting filaments

    NASA Astrophysics Data System (ADS)

    Clarke, S. D.; Whitworth, A. P.; Hubber, D. A.

    2016-05-01

    We use smoothed particle hydrodynamic simulations to investigate the growth of perturbations in infinitely long filaments as they form and grow by accretion. The growth of these perturbations leads to filament fragmentation and the formation of cores. Most previous work on this subject has been confined to the growth and fragmentation of equilibrium filaments and has found that there exists a preferential fragmentation length-scale which is roughly four times the filament's diameter. Our results show a more complicated dispersion relation with a series of peaks linking perturbation wavelength and growth rate. These are due to gravo-acoustic oscillations along the longitudinal axis during the sub-critical phase of growth. The positions of the peaks in growth rate have a strong dependence on both the mass accretion rate onto the filament and the temperature of the gas. When seeded with a multiwavelength density power spectrum, there exists a clear preferred core separation equal to the largest peak in the dispersion relation. Our results allow one to estimate a minimum age for a filament which is breaking up into regularly spaced fragments, as well as an average accretion rate. We apply the model to observations of filaments in Taurus by Tafalla & Hacar and find accretion rates consistent with those estimated by Palmeirim et al.

  6. Neutrinos from Accreting Neutron Stars

    NASA Astrophysics Data System (ADS)

    Anchordoqui, Luis A.; Torres, Diego F.; McCauley, Thomas P.; Romero, Gustavo E.; Aharonian, Felix A.

    2003-05-01

    The magnetospheres of accreting neutron stars develop electrostatic gaps with huge potential drops. Protons and ions, accelerated in these gaps along the dipolar magnetic field lines to energies greater than 100 TeV, can impact onto the surrounding accretion disk. A proton-induced cascade develops, and charged pion decays produce ν emission. With extensive disk shower simulations using DPMJET and GEANT4, we have calculated the resulting ν spectrum. We show that the spectrum produced out of the proton beam is a power law. We use this result to propose accretion-powered X-ray binaries (with highly magnetized neutron stars) as a new population of pointlike ν sources for kilometer-scale detectors such as ICECUBE. As a particular example, we discuss the case of A0535+26. We show that ICECUBE should find A0535+26 to be a periodic ν source, one for which the formation and loss of its accretion disk can be fully detected. Finally, we comment briefly on the possibility that smaller telescopes such as AMANDA could also detect A0535+26 by folding observations with the orbital period.

  7. Small Seed Black Hole Growth in Various Accretion Regimes

    NASA Astrophysics Data System (ADS)

    Gerling-Dunsmore, Hannalore J.; Hopkins, Philip F.

    2016-03-01

    Observational evidence indicates a population of super massive black holes (SMBHs) (~109 -1010M⊙) formed within 1 Gyr after the Big Bang. One proposed means of SMBH formation is accretion onto small seed black holes (BHs) (~ 100M⊙). However, the existence of SMBHs within 1 Gyr requires rapid growth, but conventional models of accretion fail to grow the seed BHs quickly enough. Super Eddington accretion (Ṁ >ṀEddington) may aid in improving growth efficiency. We study small seed BH growth via accretion in 3D, using the magneto-hydrodynamics+gravity code GIZMO. In particular, we consider a BH in a high density turbulent star-forming cloud, and ask whether or not the BH can capture sufficient gas to grow rapidly. We consider both Eddington-limited and super Eddington regimes, and resolve physics on scales from 0.1 pc to 1 kpc while including detailed models for stellar feedback physics, including stellar winds, supernovae, radiation pressure, and photo-ionization. We present results on the viability of different small seed BHs growing into SMBH candidates.

  8. Shocks in the low angular momentum accretion flow

    NASA Astrophysics Data System (ADS)

    Suková, Petra; Janiuk, Agnieszka

    2015-04-01

    We address the variability of low luminous galactic nuclei including the Sgr A* or other transient accreting systems, e.g. the black hole X-ray binaries, such as GX 339-4 or IGR J17091. These sources exhibit bright X-ray flares and quasi-periodical oscillations and are theoretically interpreted as the quasi-spherical accretion flows, formed instead of or around Keplerianaccretion disks. In low angular momentum flows the existence of shocks for some range of leading parameters (energy, angular momentum and adiabatic constant of the gas) was studied semi-analytically. The possible hysteresis effect, caused by the fact that the evolution of the flow and the formation of the shock depends on its own history, was discovered. The presence of the shock in the accreted material is important for the observable properties of the out-coming radiation. In the shocked region the gas is dense and hot, thus much more luminous than in the other case. We study the appearance of standing shocks in low angular momentum gas accreting onto a black hole with numerical hydrodynamicalsimulations, using the ZEUS code with Paczynski-Wiitapseudo-Newtonian potential.

  9. Accretion onto Protoplanetary Discs: Implications for Globular Cluster Evolution

    NASA Astrophysics Data System (ADS)

    Wijnen, Thomas; Pols, Onno; Portegies Zwart, Simon

    2015-08-01

    In the past decade, observational evidence that Globular Clusters (GCs) harbour multiple stellar populations has grown steadily. These observations are hard to reconcile with the classic picture of star formation in GCs, which approximates them as a single generation of stars. However, Bastian et al. recently suggested an evolutionary scenario in which a second (and higher order) population is formed by the accretion of chemically enriched material onto the low-mass stars in the initial GC population. In this early disc accretion scenario the low-mass, pre-main sequence stars sweep up gas expelled by the more massive stars of the same generation into their protoplanetary disc as they move through the cluster centre.Using assumptions that represent the (dynamical) conditions in a typical GC, we investigate whether a low-mass star surrounded by a protoplanetary disc can indeed accrete sufficient enriched material to account for the observed abundances in 'second generation' stars. We compare the outcome of two different smoothed particle hydrodynamics codes and check for consistency. In particular, we focus on the lifetime and stability of the disc and on the gas accretion rate onto both the star and the disc.

  10. Strongly Magnetized Accretion Disks Around Black Holes

    NASA Astrophysics Data System (ADS)

    Salvesen, Greg; Armitage, Philip J.; Simon, Jacob B.; Begelman, Mitchell C.

    2017-01-01

    Recent observations are suggestive of strongly magnetized accretion disks around black holes. Performing local (shearing box) simulations of accretion disks, we investigate how a strong magnetization state can develop and persist. We demonstrate that poloidal flux is a necessary prerequisite for the sustainability of strongly magnetized accretion disks. We also show that black hole spin measurements can become unconstrained if magnetic fields provide a significant contribution to the vertical pressure support of the accretion disk atmosphere.

  11. Warm gas accretion onto the Galaxy

    NASA Astrophysics Data System (ADS)

    Bland-Hawthorn, J.

    2009-03-01

    We present evidence that the accretion of warm gas onto the Galaxy today is at least as important as cold gas accretion. For more than a decade, the source of the bright Hα emission (up to 750 mR†) along the Magellanic Stream has remained a mystery. We present a hydrodynamical model that explains the known properties of the Hα emission and provides new insights on the lifetime of the Stream clouds. The upstream clouds are gradually disrupted due to their interaction with the hot halo gas. The clouds that follow plough into gas ablated from the upstream clouds, leading to shock ionisation at the leading edges of the downstream clouds. Since the following clouds also experience ablation, and weaker Hα (100-200 mR) is quite extensive, a disruptive cascade must be operating along much of the Stream. In order to light up much of the Stream as observed, it must have a small angle of attack (≈ 20°) to the halo, and this may already find support in new Hi observations. Another prediction is that the Balmer ratio (Hα/Hβ) will be substantially enhanced due to the slow shock; this will soon be tested by upcoming WHAM observations in Chile. We find that the clouds are evolving on timescales of 100-200 Myr, such that the Stream must be replenished by the Magellanic Clouds at a fairly constant rate (≳ 0.1 M⊙ yr-1). The ablated material falls onto the Galaxy as a warm drizzle; diffuse ionized gas at 104 K is an important constituent of galactic accretion. The observed Hα emission provides a new constraint on the rate of disruption of the Stream and, consequently, the infall rate of metal-poor gas onto the Galaxy. We consider the stability of Hi clouds falling towards the Galactic disk and show that most of these must break down into smaller fragments that become partially ionized. The Galactic halo is expected to have huge numbers of smaller neutral and ionized fragments. When the ionized component of the infalling gas is accounted for, the rate of gas accretion is

  12. Development of a computer code to predict a ventilation requirement for an underground radioactive waste storage tank

    SciTech Connect

    Lee, Y.J.; Dalpiaz, E.L.

    1997-08-01

    Computer code, WTVFE (Waste Tank Ventilation Flow Evaluation), has been developed to evaluate the ventilation requirement for an underground storage tank for radioactive waste. Heat generated by the radioactive waste and mixing pumps in the tank is removed mainly through the ventilation system. The heat removal process by the ventilation system includes the evaporation of water from the waste and the heat transfer by natural convection from the waste surface. Also, a portion of the heat will be removed through the soil and the air circulating through the gap between the primary and secondary tanks. The heat loss caused by evaporation is modeled based on recent evaporation test results by the Westinghouse Hanford Company using a simulated small scale waste tank. Other heat transfer phenomena are evaluated based on well established conduction and convection heat transfer relationships. 10 refs., 3 tabs.

  13. Microfocusing of the FERMI@Elettra FEL beam with a K-B active optics system: Spot size predictions by application of the WISE code

    NASA Astrophysics Data System (ADS)

    Raimondi, L.; Svetina, C.; Mahne, N.; Cocco, D.; Abrami, A.; De Marco, M.; Fava, C.; Gerusina, S.; Gobessi, R.; Capotondi, F.; Pedersoli, E.; Kiskinova, M.; De Ninno, G.; Zeitoun, P.; Dovillaire, G.; Lambert, G.; Boutu, W.; Merdji, H.; Gonzalez, A. I.; Gauthier, D.; Zangrando, M.

    2013-05-01

    FERMI@Elettra, the first seeded EUV-SXR free electron laser (FEL) facility located at Elettra Sincrotrone Trieste has been conceived to provide very short (10-100 fs) pulses with ultrahigh peak brightness and wavelengths from 100 nm to 4 nm. A section fully dedicated to the photon transport and analysis diagnostics, named PADReS, has already been installed and commissioned. Three of the beamlines, EIS-TIMEX, DiProI and LDM, installed after the PADReS section, are in advanced commissioning state and will accept the first users in December 2012. These beam lines employ active X-ray optics in order to focus the FEL beam as well as to perform a controlled beam-shaping at focus. Starting from mirror surface metrology characterization, it is difficult to predict the focal spot shape applying only methods based on geometrical optics such as the ray tracing. Within the geometrical optics approach one cannot take into account the diffraction effect from the optics edges, i.e. the aperture diffraction, and the impact of different surface spatial wavelengths to the spot size degradation. Both these effects are strongly dependent on the photon beam energy and mirror incident angles. We employed a method based on physical optics, which applies the Huygens-Fresnel principle to reflection (on which the WISE code is based). In this work we report the results of the first measurements of the focal spot in the DiProI beamline end-station and compare them to the predictions computed with Shadow code and WISE code, starting from the mirror surface profile characterization.

  14. Accretion and Magnetic Reconnection in the Classical T Tauri Binary DQ Tau

    NASA Astrophysics Data System (ADS)

    Tofflemire, Benjamin M.; Mathieu, Robert D.; Ardila, David R.; Akeson, Rachel L.; Ciardi, David R.; Johns-Krull, Christopher; Herczeg, Gregory J.; Quijano-Vodniza, Alberto

    2017-01-01

    The theory of binary star formation predicts that close binaries (a < 100 au) will experience periodic pulsed accretion events as streams of material form at the inner edge of a circumbinary disk (CBD), cross a dynamically cleared gap, and feed circumstellar disks or accrete directly onto the stars. The archetype for the pulsed accretion theory is the eccentric, short-period, classical T Tauri binary DQ Tau. Low-cadence (∼daily) broadband photometry has shown brightening events near most periastron passages, just as numerical simulations would predict for an eccentric binary. Magnetic reconnection events (flares) during the collision of stellar magnetospheres near periastron could, however, produce the same periodic, broadband behavior when observed at a one-day cadence. To reveal the dominant physical mechanism seen in DQ Tau’s low-cadence observations, we have obtained continuous, moderate-cadence, multiband photometry over 10 orbital periods, supplemented with 27 nights of minute-cadence photometry centered on four separate periastron passages. While both accretion and stellar flares are present, the dominant timescale and morphology of brightening events are characteristic of accretion. On average, the mass accretion rate increases by a factor of five near periastron, in good agreement with recent models. Large variability is observed in the morphology and amplitude of accretion events from orbit to orbit. We argue that this is due to the absence of stable circumstellar disks around each star, compounded by inhomogeneities at the inner edge of the CBD and within the accretion streams themselves. Quasiperiodic apastron accretion events are also observed, which are not predicted by binary accretion theory.

  15. Accretion Disk Outflows from Compact Object Mergers

    NASA Astrophysics Data System (ADS)

    Metzger, Brian

    Nuclear reactions play a key role in the accretion disks and outflows associated with the merger of binary compact objects and the central engines of gamma-ray bursts and supernovae. The proposed research program will investigate the impact of nucleosynthesis on these events and their observable signatures by means of analytic calculations and numerical simulations. One focus of this research is rapid accretion following the tidal disruption of a white dwarf (WD) by a neutron star (NS) or black hole (BH) binary companion. Tidal disruption shreds the WD into a massive torus composed of C, O, and/or He, which undergoes nuclear reactions and burns to increasingly heavier elements as it flows to smaller radii towards the central compact object. The nuclear energy so released is comparable to that released gravitationally, suggesting that burning could drastically alter the structure and stability of the accretion flow. Axisymmetric hydrodynamic simulations of the evolution of the torus including nuclear burning will be performed to explore issues such as the mass budget of the flow (accretion vs. outflows) and its thermal stability (steady burning and accretion vs. runaway explosion). The mass, velocity, and composition of outflows from the disk will be used in separate radiative transfer calculations to predict the lightcurves and spectra of the 56Ni-decay powered optical transients from WD-NS/WD-BH mergers. The possible connection of such events to recently discovered classes of sub-luminous Type I supernovae will be assessed. The coalescence of NS-NS/NS-BH binaries also results in the formation of a massive torus surrounding a central compact object. Three-dimensional magnetohydrodynamic simulations of the long-term evolution of such accretion disks will be performed, which for the first time follow the effects of weak interactions and the nuclear energy released by Helium recombination. The nucleosynthetic yield of disk outflows will be calculated using a detailed

  16. Polar Codes

    DTIC Science & Technology

    2014-12-01

    density parity check (LDPC) code, a Reed–Solomon code, and three convolutional codes. iii CONTENTS EXECUTIVE SUMMARY...the most common. Many civilian systems use low density parity check (LDPC) FEC codes, and the Navy is planning to use LDPC for some future systems...other forward error correction methods: a turbo code, a low density parity check (LDPC) code, a Reed–Solomon code, and three convolutional codes

  17. Black Hole Accretion Discs on a Moving Mesh

    NASA Astrophysics Data System (ADS)

    Ryan, Geoffrey

    2017-01-01

    We present multi-dimensional numerical simulations of black hole accretion disks relevant for the production of electromagnetic counterparts to gravitational wave sources. We perform these simulations with a new general relativistic version of the moving-mesh magnetohydrodynamics code DISCO which we will present. This open-source code, GR-DISCO uses an orbiting and shearing mesh which moves with the dominant flow velocity, greatly improving the numerical accuracy of the thermodynamic variables in supersonic flows while also reducing numerical viscosity and greatly increasing computational efficiency by allowing for a larger time step. We have used GR-DISCO to study black hole accretion discs subject to gravitational torques from a binary companion, relevant for both current and future supermassive binary black hole searches and also as a possible electromagnetic precursor mechanism for LIGO events. Binary torques in these discs excite spiral shockwaves which effectively transport angular momentum in the disc and propagate through the innermost stable orbit, leading to stress corresponding to an alpha-viscosity of 10-2. We also present three-dimensional GRMHD simulations of neutrino dominated accretion flows (NDAFs) occurring after a binary neutron star merger in order to elucidate the conditions for electromagnetic transient production accompanying these gravitational waves sources expected to be detected by LIGO in the near future.

  18. Conservative GRMHD simulations of moderately thin, tilted accretion disks

    SciTech Connect

    Teixeira, Danilo Morales; Fragile, P. Chris; Zhuravlev, Viacheslav V.; Ivanov, Pavel B.

    2014-12-01

    This paper presents our latest numerical simulations of accretion disks that are misaligned with respect to the rotation axis of a Kerr black hole. In this work, we use a new, fully conservative version of the Cosmos++ general relativistic magnetohydrodynamics (GRMHD) code, coupled with an ad hoc cooling function designed to control the thickness of the disk. Together these allow us to simulate the thinnest tilted accretion disks ever using a GRMHD code. In this way, we are able to probe the regime where the dimensionless stress and scale height of the disk become comparable. We present results for both prograde and retrograde cases. The simulated prograde tilted disk shows no sign of Bardeen-Petterson alignment even in the innermost parts of the disk. The simulated retrograde tilted disk, however, does show modest alignment. The implication of these results is that the parameter space associated with Bardeen-Petterson alignment for prograde disks may be rather small, only including very thin disks. Unlike our previous work, we find no evidence for standing shocks in our simulated tilted disks. We ascribe this to the black hole spin, tilt angle, and disk scale height all being small in these simulations. We also add to the growing body of literature pointing out that the turbulence driven by the magnetorotational instability in global simulations of accretion disks is not isotropic. Finally, we provide a comparison between our moderately thin, untilted reference simulation and other numerical simulations of thin disks in the literature.

  19. The Event Horizon Telescope: exploring strong gravity and accretion physics

    NASA Astrophysics Data System (ADS)

    Ricarte, Angelo; Dexter, Jason

    2015-01-01

    The Event Horizon Telescope (EHT), a global sub-millimetre wavelength very long baseline interferometry array, is now resolving the innermost regions around the supermassive black holes Sgr A* and M87. Using black hole images from both simple geometric models and relativistic magnetohydrodynamical accretion flow simulations, we perform a variety of experiments to assess the promise of the EHT for studying strong gravity and accretion physics during the stages of its development. We find that (1) the addition of the Large Millimeter Telescope (LMT) and Atacama Large Millimeter/submillimeter Array along with upgraded instrumentation in the `Complete' stage of the EHT allow detection of the photon ring, a signature of Kerr strong gravity, for predicted values of its total flux; (2) the inclusion of coherently averaged closure phases in our analysis dramatically improves the precision of even the current array, allowing (3) significantly tighter constraints on plausible accretion models and (4) detections of structural variability at the levels predicted by the models. While observations at 345 GHz circumvent problems due to interstellar electron scattering in line of sight to the galactic centre, short baselines provided by CARMA (Combined Array for Research in Millimeter-wave Astronomy) and/or the LMT could be required in order to constrain the overall shape of the accretion flow. Given the systematic uncertainties in the underlying models, using the full complement of two observing frequencies (230 and 345 GHz) and sources (Sgr A* and M87) may be critical for achieving transformative science with the EHT experiment.

  20. Genome Wide Identification and Functional Prediction of Long Non-Coding RNAs Responsive to Sclerotinia sclerotiorum Infection in Brassica napus

    PubMed Central

    Joshi, Raj Kumar; Megha, Swati; Basu, Urmila; Rahman, Muhammad H.; Kav, Nat N. V.

    2016-01-01

    Sclerotinia stem rot caused by Sclerotinia sclerotiorum affects canola production worldwide. Emerging evidence suggests that long non-coding RNAs (lncRNAs) play important roles in the regulation of gene expression in plants, in response to both abiotic and biotic stress. So far, identification of lncRNAs has been limited to a few model plant species, and their roles in mediating responses to biotic stresses are yet to be characterized in Brassica napus. The present study reports the identification of novel lncRNAs responsive to S. sclerotiorum infection in B. napus at two time points after infection (24 hpi and 48 hpi) using a stranded RNA-Sequencing technique and a detection pipeline for lncRNAs. Of the total 3,181 lncRNA candidates, 2,821 lncRNAs were intergenic, 111 were natural antisense transcripts, 76 possessed exonic overlap with the reference coding transcripts while the remaining 173 represented novel lnc- isoforms. Forty one lncRNAs were identified as the precursors for microRNAs (miRNAs) including miR156, miR169 and miR394, with significant roles in mediating plant responses to fungal phytopathogens. A total of 931 differentially expressed lncRNAs were identified in response to S. sclerotiorum infection and the expression of 12 such lncRNAs was further validated using qRT-PCR. B. napus antisense lncRNA, TCONS_00000966, having 90% overlap with a plant defensin gene, showed significant induction at both infection stages, suggesting its involvement in the transcriptional regulation of defense responsive genes under S. sclerotiorum infection. Additionally, nine lncRNAs showed overlap with cis-regulatory regions of differentially expressed genes of B. napus. Quantitative RT-PCR verification of a set of S. sclerotiorum responsive sense/antisense transcript pairs revealed contrasting expression patterns, supporting the hypothesis that steric clashes of transcriptional machinery may lead to inactivation of sense promoter. Our findings highlight the potential

  1. The PRC2-binding long non-coding RNAs in human and mouse genomes are associated with predictive sequence features

    PubMed Central

    Tu, Shiqi; Yuan, Guo-Cheng; Shao, Zhen

    2017-01-01

    Recently, long non-coding RNAs (lncRNAs) have emerged as an important class of molecules involved in many cellular processes. One of their primary functions is to shape epigenetic landscape through interactions with chromatin modifying proteins. However, mechanisms contributing to the specificity of such interactions remain poorly understood. Here we took the human and mouse lncRNAs that were experimentally determined to have physical interactions with Polycomb repressive complex 2 (PRC2), and systematically investigated the sequence features of these lncRNAs by developing a new computational pipeline for sequences composition analysis, in which each sequence is considered as a series of transitions between adjacent nucleotides. Through that, PRC2-binding lncRNAs were found to be associated with a set of distinctive and evolutionarily conserved sequence features, which can be utilized to distinguish them from the others with considerable accuracy. We further identified fragments of PRC2-binding lncRNAs that are enriched with these sequence features, and found they show strong PRC2-binding signals and are more highly conserved across species than the other parts, implying their functional importance. PMID:28139710

  2. Long intergenic non-coding RNA 271 is predictive of a poorer prognosis of papillary thyroid cancer

    PubMed Central

    Ma, Ben; Liao, Tian; Wen, Duo; Dong, Chuanpeng; Zhou, Li; Yang, Shuwen; Wang, Yu; Ji, Qinghai

    2016-01-01

    A number of long non-coding RNAs (lncRNAs) have been found to play critical roles in oncogenesis and tumor progression. We aimed to investigate whether lncRNAs could act as prognostic biomarkers for papillary thyroid cancer (PTC) that may assist us in evaluating disease status and prognosis for patients. We found 220 lncRNAs with expression alteration from the annotated 2773 lncRNAs approved by the HUGO gene nomenclature committee in The Cancer Genome Atlas (TCGA) dataset, of which FAM41C, CTBP1-AS2, LINC00271, HAR1A, LINC00310 and HAS2-AS1 were associated with recurrence. After adjusting classical clinicopathogical factors and BRAFV600E mutation, LINC00271 was found to be an independent risk factor for extrathyroidal extension, lymph node metastasis, advanced tumor stage III/IV and recurrence in multivariate analyses. Additionally, LINC00271 expression was significantly downregulated in PTCs versus adjacent normal tissues (P < 0.001). The Gene Set Enrichment Analysis (GSEA) revealed that genes associated with cell adhesion molecules, cell cycle, P53 signaling pathway and JAK/STAT signaling pathway were remarkably enriched in lower-LINC00271 versus higher-LINC00271 tumors. In conclusion, LINC00271 was identified as a possible suppressor gene in PTC in our study, and it may serve as a potential predictor of poor prognoses in PTC. PMID:27833134

  3. The PRC2-binding long non-coding RNAs in human and mouse genomes are associated with predictive sequence features

    NASA Astrophysics Data System (ADS)

    Tu, Shiqi; Yuan, Guo-Cheng; Shao, Zhen

    2017-01-01

    Recently, long non-coding RNAs (lncRNAs) have emerged as an important class of molecules involved in many cellular processes. One of their primary functions is to shape epigenetic landscape through interactions with chromatin modifying proteins. However, mechanisms contributing to the specificity of such interactions remain poorly understood. Here we took the human and mouse lncRNAs that were experimentally determined to have physical interactions with Polycomb repressive complex 2 (PRC2), and systematically investigated the sequence features of these lncRNAs by developing a new computational pipeline for sequences composition analysis, in which each sequence is considered as a series of transitions between adjacent nucleotides. Through that, PRC2-binding lncRNAs were found to be associated with a set of distinctive and evolutionarily conserved sequence features, which can be utilized to distinguish them from the others with considerable accuracy. We further identified fragments of PRC2-binding lncRNAs that are enriched with these sequence features, and found they show strong PRC2-binding signals and are more highly conserved across species than the other parts, implying their functional importance.

  4. ACCRETION RATES FOR T TAURI STARS USING NEARLY SIMULTANEOUS ULTRAVIOLET AND OPTICAL SPECTRA

    SciTech Connect

    Ingleby, Laura; Calvet, Nuria; Blaty, Alex; Herczeg, Gregory; Walter, Frederick; Ardila, David; Alexander, Richard; Edwards, Suzan; Espaillat, Catherine; Gregory, Scott G.; Hillenbrand, Lynne; Brown, Alexander E-mail: ncalvet@umich.edu

    2013-04-20

    We analyze the accretion properties of 21 low-mass T Tauri stars using a data set of contemporaneous near-UV (NUV) through optical observations obtained with the Hubble Space Telescope Imaging Spectrograph and the ground-based Small and Medium Aperture Research Telescope System, a unique data set because of the nearly simultaneous broad wavelength coverage. Our data set includes accreting T Tauri stars in Taurus, Chamaeleon I, {eta} Chamaeleon, and the TW Hydra Association. For each source we calculate the accretion rate (M-dot ) by fitting the NUV and optical excesses above the photosphere, produced in the accretion shock, introducing multiple accretion components characterized by a range in energy flux (or density) for the first time. This treatment is motivated by models of the magnetospheric geometry and accretion footprints, which predict that high-density, low filling factor accretion spots coexist with low-density, high filling factor spots. By fitting the UV and optical spectra with multiple accretion components, we can explain excesses which have been observed in the near-IR. Comparing our estimates of M-dot to previous estimates, we find some discrepancies; however, they may be accounted for when considering assumptions for the amount of extinction and variability in optical spectra. Therefore, we confirm many previous estimates of the accretion rate. Finally, we measure emission line luminosities from the same spectra used for the M-dot estimates, to produce correlations between accretion indicators (H{beta}, Ca II K, C II], and Mg II) and accretion properties obtained simultaneously.

  5. Accretion Rates for T Tauri Stars Using Nearly Simultaneous Ultraviolet and Optical Spectra

    NASA Astrophysics Data System (ADS)

    Ingleby, Laura; Calvet, Nuria; Herczeg, Gregory; Blaty, Alex; Walter, Frederick; Ardila, David; Alexander, Richard; Edwards, Suzan; Espaillat, Catherine; Gregory, Scott G.; Hillenbrand, Lynne; Brown, Alexander

    2013-04-01

    We analyze the accretion properties of 21 low-mass T Tauri stars using a data set of contemporaneous near-UV (NUV) through optical observations obtained with the Hubble Space Telescope Imaging Spectrograph and the ground-based Small and Medium Aperture Research Telescope System, a unique data set because of the nearly simultaneous broad wavelength coverage. Our data set includes accreting T Tauri stars in Taurus, Chamaeleon I, η Chamaeleon, and the TW Hydra Association. For each source we calculate the accretion rate (\\dot{M}) by fitting the NUV and optical excesses above the photosphere, produced in the accretion shock, introducing multiple accretion components characterized by a range in energy flux (or density) for the first time. This treatment is motivated by models of the magnetospheric geometry and accretion footprints, which predict that high-density, low filling factor accretion spots coexist with low-density, high filling factor spots. By fitting the UV and optical spectra with multiple accretion components, we can explain excesses which have been observed in the near-IR. Comparing our estimates of \\dot{M} to previous estimates, we find some discrepancies; however, they may be accounted for when considering assumptions for the amount of extinction and variability in optical spectra. Therefore, we confirm many previous estimates of the accretion rate. Finally, we measure emission line luminosities from the same spectra used for the \\dot{M} estimates, to produce correlations between accretion indicators (Hβ, Ca II K, C II], and Mg II) and accretion properties obtained simultaneously.

  6. Binary Black Hole Accretion from a Circumbinary Disk: Gas Dynamics inside the Central Cavity

    NASA Astrophysics Data System (ADS)

    Farris, Brian D.; Duffell, Paul; MacFadyen, Andrew I.; Haiman, Zoltan

    2014-03-01

    We present the results of two-dimensional (2D) hydrodynamical simulations of circumbinary disk accretion using the finite-volume code DISCO. This code solves the 2D viscous Navier-Stokes equations on a high-resolution moving mesh which shears with the fluid flow, greatly reducing advection errors in comparison with a fixed grid. We perform a series of simulations for binary mass ratios in the range 0.026 <= q <= 1.0, each lasting longer than a viscous time so that we reach a quasi-steady accretion state. In each case, we find that gas is efficiently stripped from the inner edge of the circumbinary disk and enters the cavity along accretion streams, which feed persistent "mini disks" surrounding each black hole. We find that for q >~ 0.1, the binary excites eccentricity in the inner region of the circumbinary disk, creating an overdense lump which gives rise to enhanced periodicity in the accretion rate. The dependence of the periodicity on mass ratio may provide a method for observationally inferring mass ratios from measurements of the accretion rate. We also find that for all mass ratios studied, the magnitude of the accretion onto the secondary is sufficient to drive the binary toward larger mass ratio. This suggests a mechanism for biasing mass-ratio distributions toward equal mass.

  7. Binary black hole accretion from a circumbinary disk: Gas dynamics inside the central cavity

    SciTech Connect

    Farris, Brian D.; Duffell, Paul; MacFadyen, Andrew I.; Haiman, Zoltan

    2014-03-10

    We present the results of two-dimensional (2D) hydrodynamical simulations of circumbinary disk accretion using the finite-volume code DISCO. This code solves the 2D viscous Navier-Stokes equations on a high-resolution moving mesh which shears with the fluid flow, greatly reducing advection errors in comparison with a fixed grid. We perform a series of simulations for binary mass ratios in the range 0.026 ≤ q ≤ 1.0, each lasting longer than a viscous time so that we reach a quasi-steady accretion state. In each case, we find that gas is efficiently stripped from the inner edge of the circumbinary disk and enters the cavity along accretion streams, which feed persistent 'mini disks' surrounding each black hole. We find that for q ≳ 0.1, the binary excites eccentricity in the inner region of the circumbinary disk, creating an overdense lump which gives rise to enhanced periodicity in the accretion rate. The dependence of the periodicity on mass ratio may provide a method for observationally inferring mass ratios from measurements of the accretion rate. We also find that for all mass ratios studied, the magnitude of the accretion onto the secondary is sufficient to drive the binary toward larger mass ratio. This suggests a mechanism for biasing mass-ratio distributions toward equal mass.

  8. ROTATING ACCRETION FLOWS: FROM INFINITY TO THE BLACK HOLE

    SciTech Connect

    Li, Jason; Ostriker, Jeremiah; Sunyaev, Rashid

    2013-04-20

    Accretion onto a supermassive black hole of a rotating inflow is a particularly difficult problem to study because of the wide range of length scales involved. There have been broadly utilized analytic and numerical treatments of the global properties of accretion flows, but detailed numerical simulations are required to address certain critical aspects. We use the ZEUS code to run hydrodynamical simulations of rotating, axisymmetric accretion flows with Bremsstrahlung cooling, considering solutions for which the centrifugal balance radius significantly exceeds the Schwarzschild radius, with and without viscous angular momentum transport. Infalling gas is followed from well beyond the Bondi radius down to the vicinity of the black hole. We produce a continuum of solutions with respect to the single parameter M-dot{sub B}/ M-dot{sub Edd}, and there is a sharp transition between two general classes of solutions at an Eddington ratio of M-dot{sub B}/M-dot{sub Edd}{approx}few Multiplication-Sign 10{sup -2}. Our high inflow solutions are very similar to the standard Shakura and Sunyaev results. But our low inflow results are to zeroth order the stationary Papaloizou and Pringle solution, which has no accretion. To next order in the small, assumed viscosity they show circulation, with disk and conical wind outflows almost balancing inflow. These solutions are characterized by hot, vertically extended disks, and net accretion proceeds at an extremely low rate, only of order {alpha} times the inflow rate. Our simulations have converged with respect to spatial resolution and temporal duration, and they do not depend strongly on our choice of boundary conditions.

  9. Planetary accretion in circumstellar disks

    NASA Technical Reports Server (NTRS)

    Lissauer, Jack J.; Stewart, Glen R.

    1993-01-01

    The formation of terrestrial planets and the cores of Jovian planets is reviewed in the framework of the planetesimal hypothesis, wherein planets are assumed to grow via the pairwise accumulation of small solid bodies. Emphasis is placed on the dynamics of solid body accretion from kilometer size planetesimals to terrestrial type planets. This stage of planetary growth is least dependent on the characteristics of the evolutionary state of the central star. It is concluded that the evolution of the planetesimal size distribution is determined by the gravitationally enhanced collision cross-section, which favors collisions between planetesimals with smaller velocities. Runaway growth of the largest planetesimal in each accretion zone appears to be a likely outcome. The subsequent accumulation of the resulting protoplanets leads to a large degree of radial mixing in the terrestrial planet region, and giant impacts are probable.

  10. High abundance of Serine/Threonine-rich regions predicted to be hyper-O-glycosylated in the secretory proteins coded by eight fungal genomes

    PubMed Central

    2012-01-01

    Background O-glycosylation of secretory proteins has been found to be an important factor in fungal biology and virulence. It consists in the addition of short glycosidic chains to Ser or Thr residues in the protein backbone via O-glycosidic bonds. Secretory proteins in fungi frequently display Ser/Thr rich regions that could be sites of extensive O-glycosylation. We have analyzed in silico the complete sets of putatively secretory proteins coded by eight fungal genomes (Botrytis cinerea, Magnaporthe grisea, Sclerotinia sclerotiorum, Ustilago maydis, Aspergillus nidulans, Neurospora crassa, Trichoderma reesei, and Saccharomyces cerevisiae) in search of Ser/Thr-rich regions as well as regions predicted to be highly O-glycosylated by NetOGlyc (http://www.cbs.dtu.dk). Results By comparison with experimental data, NetOGlyc was found to overestimate the number of O-glycosylation sites in fungi by a factor of 1.5, but to be quite reliable in the prediction of highly O-glycosylated regions. About half of secretory proteins have at least one Ser/Thr-rich region, with a Ser/Thr content of at least 40% over an average length of 40 amino acids. Most secretory proteins in filamentous fungi were predicted to be O-glycosylated, sometimes in dozens or even hundreds of sites. Residues predicted to be O-glycosylated have a tendency to be grouped together forming hyper-O-glycosylated regions of varying length. Conclusions About one fourth of secretory fungal proteins were predicted to have at least one hyper-O-glycosylated region, which consists of 45 amino acids on average and displays at least one O-glycosylated Ser or Thr every four residues. These putative highly O-glycosylated regions can be found anywhere along the proteins but have a slight tendency to be at either one of the two ends. PMID:22994653

  11. Accretion Discs Show Their True Colours

    NASA Astrophysics Data System (ADS)

    2008-07-01

    Quasars are the brilliant cores of remote galaxies, at the hearts of which lie supermassive black holes that can generate enough power to outshine the Sun a trillion times. These mighty power sources are fuelled by interstellar gas, thought to be sucked into the hole from a surrounding 'accretion disc'. A paper in this week's issue of the journal Nature, partly based on observations collected with ESO's Very Large Telescope, verifies a long-standing prediction about the intensely luminous radiation emitted by these accretion discs. Uncovering the disc ESO PR Photo 21/08 Uncovering the inner disc "Astronomers were puzzled by the fact that the best models of these discs couldn't quite be reconciled with some of the observations, in particular, with the fact that these discs did not appear as blue as they should be," explains lead-author Makoto Kishimoto. Such a discrepancy could be the signal that there was something very wrong with the models. With his colleagues, he investigated this discrepancy by studying the polarised light from six quasars. This enabled them to demonstrate that the disc spectrum is as blue as predicted. "The crucial observational difficulty here has been that the disc is surrounded by a much larger torus containing hot dust, whose light partly outshines that of the disc," says Kishimoto. "Because the light coming from the disc is scattered in the disc vicinity and thus polarised, by observing only polarised light from the quasars, one can uncover the buried light from the disc." In a similar way that a fisherman would wear polarised sunglasses to help get rid of the glare from the water surface and allow him to see more clearly under the water, the filter on the telescope allowed the astronomers to see beyond surrounding clouds of dust and gas to the blue colour of the disc in infrared light. The observations were done with the FORS and ISAAC instruments on one of the 8.2-m Unit Telescopes of ESO's Very Large Telescope, located in the Atacama

  12. A Wind Accretion Model for HLX-1

    NASA Astrophysics Data System (ADS)

    Miller, M. Coleman; Farrell, Sean A.; Maccarone, Thomas J.

    2014-06-01

    The brightest ultraluminous X-ray source currently known, HLX-1, has been observed to undergo five outburst cycles. The periodicity of these outbursts, and their high inferred maximum accretion rates of ~few × 10-4 M ⊙ yr-1, naturally suggest Roche lobe overflow at the pericenter of an eccentric orbit. It is, however, difficult for the Roche lobe overflow model to explain the apparent trend of decreasing decay times over the different outbursts while the integrated luminosity also drops. Thus, if the trend is real rather than simply being a reflection of the complex physics of accretion disks, a different scenario may be necessary. We present a speculative model in which, within the last decade, a high-mass giant star had most of its envelope tidally stripped by the ~104 - 5 M ⊙ black hole in HLX-1, and the remaining core plus low-mass hydrogen envelope now feeds the hole with a strong wind. This model can explain the short decay time of the disk, and could explain the fast decrease in decay time if the wind speed changes with time. A key prediction of this model is that there will be excess line absorption due to the wind; our analysis does in fact find a flux deficit in the ~0.9-1.1 keV range that is consistent with predictions, albeit at low significance. If this idea is correct, we also expect that within years to dacades the bound material from the original disruption will return and will make HLX-1 a persistently bright source.

  13. Hydrodynamic Viscosity in Accretion Disks

    NASA Astrophysics Data System (ADS)

    Duschl, Wolfgang J.; Strittmatter, Peter A.; Biermann, Peter L.

    We propose a generalized accretion disk viscosity prescription based on hydrodynamically driven turbulence at the critical effective Reynolds number. This approach is consistent with recent re-analysis by Richard & Zahn (1999) of experimental results on turbulent Couette-Taylor flows. This new β-viscosity formulation applies to both selfgravitating and non-selfgravitating disks and is shown to yield the standard α-disk prescription in the case of shock dissipation limited, non-selfgravitating disks.

  14. Accretion disks around black holes

    NASA Technical Reports Server (NTRS)

    Abramowicz, M. A.

    1994-01-01

    The physics of accretion flow very close to a black hole is dominated by several general relativistic effects. It cannot be described by the standard Shakura Sunyaev model or by its relativistic version developed by Novikov and Thome. The most important of these effects is a dynamical mass loss from the inner edge of the disk (Roche lobe overflow). The relativistic Roche lobe overflow induces a strong advective cooling, which is sufficient to stabilize local, axially symmetric thermal and viscous modes. It also stabilizes the non-axially-symmetric global modes discovered by Papaloizou and Pringle. The Roche lobe overflow, however, destabilizes sufficiently self-gravitating accretion disks with respect to a catastrophic runaway of mass due to minute changes of the gravitational field induced by the changes in the mass and angular momentum of the central black hole. One of the two acoustic modes may become trapped near the inner edge of the disk. All these effects, absent in the standard model, have dramatic implications for time-dependent behavior of the accretion disks around black holes.

  15. Formation of giant planets’ cores by classical planetesimal accretion

    NASA Astrophysics Data System (ADS)

    Morishima, Ryuji

    2015-11-01

    In the core accretion scenario for formation of giant planets, solid-cores each with a roughly ten Earth masses first form, followed by gravitational capture of massive gaseous envelopes. Although recent models favor solid core growth by accretion of centimeter-sized pebbles, classical models in which embryos grow by accretion of km-sized planetesimals have not been fully understood. We perform a suite of simulations for accretion of solid cores, using a particle-based hybrid code that we have recently developed (Morishima 2015, Icarus 260, 368). The code uses an N-body routine for interactions with planetary embryos while a large number of small planetesimals are represented by a small number of tracers and tracer-tracer interactions are handled by a statistical routine. The initial surface densities of both solid and gas are assumed to be seven times the minimum mass solar nebula. The initial planetesimal size, r_0, is varied from 100 m to 100 km. Collisions are assumed to result in either merging or hit-and-run bouncing depending on impact velocity (Genda et al. 2012), while fragmentation is ignored. We find that embryos cannot usually grow to 10 Earth masses within 2 Myr, although it can happen in some cases. For the case of r_0 = 100 m, embryos can grow up to 6-7 Earth masses although they are quickly pushed toward the central star by planetesimals. For r_0 = 100 km, embryo masses can reach only two Earth masses within 2 Myr at best as their growth is slow. The case of r_0 = 1 km is found to be most promising, as growth of embryos is fast while their inward migration is not very rapid.

  16. Clinical coding. Code breakers.

    PubMed

    Mathieson, Steve

    2005-02-24

    --The advent of payment by results has seen the role of the clinical coder pushed to the fore in England. --Examinations for a clinical coding qualification began in 1999. In 2004, approximately 200 people took the qualification. --Trusts are attracting people to the role by offering training from scratch or through modern apprenticeships.

  17. The thing that should not be: predictive coding and the uncanny valley in perceiving human and humanoid robot actions.

    PubMed

    Saygin, Ayse Pinar; Chaminade, Thierry; Ishiguro, Hiroshi; Driver, Jon; Frith, Chris

    2012-04-01

    Using functional magnetic resonance imaging (fMRI) repetition suppression, we explored the selectivity of the human action perception system (APS), which consists of temporal, parietal and frontal areas, for the appearance and/or motion of the perceived agent. Participants watched body movements of a human (biological appearance and movement), a robot (mechanical appearance and movement) or an android (biological appearance, mechanical movement). With the exception of extrastriate body area, which showed more suppression for human like appearance, the APS was not selective for appearance or motion per se. Instead, distinctive responses were found to the mismatch between appearance and motion: whereas suppression effects for the human and robot were similar to each other, they were stronger for the android, notably in bilateral anterior intraparietal sulcus, a key node in the APS. These results could reflect increased prediction error as the brain negotiates an agent that appears human, but does not move biologically, and help explain the 'uncanny valley' phenomenon.

  18. Time-dependent spherically symmetric accretion onto compact X-ray sources

    NASA Technical Reports Server (NTRS)

    Cowie, L. L.; Ostriker, J. P.; Stark, A. A.

    1978-01-01

    Analytical arguments and a numerical hydrodynamic code are used to investigate spherically symmetric accretion onto a compact object, in an attempt to provide some insight into gas flows heated by an outgoing X-ray flux. It is shown that preheating of spherically symmetric accretion flows by energetic radiation from an X-ray source results in time-dependent behavior for a much wider range of source parameters than was determined previously and that there are two distinct types of instability. The results are compared with observations of X-ray bursters and transients as well as with theories on quasars and active galactic nuclei that involve quasi-spherically symmetric accretion onto massive black holes. Models based on spherically symmetric accretion are found to be inconsistent with observations of bursters and transients.

  19. Identification of Predictive Markers for Response to Neoadjuvant Chemoradiation in Rectal Carcinomas by Proteomic Isotope Coded Protein Label (ICPL) Analysis

    PubMed Central

    Croner, Roland S.; Sevim, Müzeyyen; Metodiev, Metodi V.; Jo, Peter; Ghadimi, Michael; Schellerer, Vera; Brunner, Maximillian; Geppert, Carol; Rau, Tilman; Stürzl, Michael; Naschberger, Elisabeth; Matzel, Klaus E.; Hohenberger, Werner; Lottspeich, Friedrich; Kellermann, Josef

    2016-01-01

    Neoadjuvant chemoradiation (nCRT) is an established procedure in stage union internationale contre le cancer (UICC) II/III rectal carcinomas. Around 53% of the tumours present with good tumor regression after nCRT, and 8%–15% are complete responders. Reliable selection markers would allow the identification of poor or non-responders prior to therapy. Tumor biopsies were harvested from 20 patients with rectal carcinomas, and stored in liquid nitrogen prior to therapy after obtaining patients’ informed consent (Erlangen-No.3784). Patients received standardized nCRT with 5-Fluoruracil (nCRT I) or 5-Fluoruracil ± Oxaliplatin (nCRT II) according to the CAO/ARO/AIO-04 protocol. After surgery, regression grading (Dworak) of the tumors was performed during histopathological examination of the specimens. Tumors were classified as poor (Dworak 1 + 2) or good (Dworak 3 + 4) responders. Laser capture microdissection (LCM) for tumor enrichment was performed on preoperative biopsies. Differences in expressed proteins between poor and good responders to nCRT I and II were identified by proteomic analysis (Isotope Coded Protein Label, ICPL™) and selected markers were validated by immunohistochemistry. Tumors of 10 patients were classified as histopathologically poor (Dworak 1 or 2) and the other 10 tumor samples as histopathologically good (Dworak 3 or 4) responders to nCRT after surgery. Sufficient material in good quality was harvested for ICPL analysis by LCM from all biopsies. We identified 140 differentially regulated proteins regarding the selection criteria and the response to nCRT. Fourteen of these proteins were synchronously up-regulated at least 1.5-fold after nCRT I or nCRT II (e.g., FLNB, TKT, PKM2, SERINB1, IGHG2). Thirty-five proteins showed a complete reciprocal regulation (up or down) after nCRT I or nCRT II and the rest was regulated either according to nCRT I or II. The protein expression of regulated proteins such as PLEC1, TKT, HADHA and TAGLN was

  20. Positive predictive value of cardiac examination, procedure and surgery codes in the Danish National Patient Registry: a population-based validation study

    PubMed Central

    Adelborg, Kasper; Sundbøll, Jens; Munch, Troels; Frøslev, Trine; Sørensen, Henrik Toft; Bøtker, Hans Erik; Schmidt, Morten

    2016-01-01

    Objective Danish medical registries are widely used for cardiovascular research, but little is known about the data quality of cardiac interventions. We computed positive predictive values (PPVs) of codes for cardiac examinations, procedures and surgeries registered in the Danish National Patient Registry during 2010–2012. Design Population-based validation study. Setting We randomly sampled patients from 1 university hospital and 2 regional hospitals in the Central Denmark Region. Participants 1239 patients undergoing different cardiac interventions. Main outcome measure PPVs with medical record review as reference standard. Results A total of 1233 medical records (99% of the total sample) were available for review. PPVs ranged from 83% to 100%. For examinations, the PPV was overall 98%, reflecting PPVs of 97% for echocardiography, 97% for right heart catheterisation and 100% for coronary angiogram. For procedures, the PPV was 98% overall, with PPVs of 98% for thrombolysis, 92% for cardioversion, 100% for radiofrequency ablation, 98% for percutaneous coronary intervention, and 100% for both cardiac pacemakers and implantable cardiac defibrillators. For cardiac surgery, the overall PPVs was 99%, encompassing PPVs of 100% for mitral valve surgery, 99% for aortic valve surgery, 98% for coronary artery bypass graft surgery, and 100% for heart transplantation. The accuracy of coding was consistent within age, sex, and calendar year categories, and the agreement between independent reviewers was high (99%). Conclusions Cardiac examinations, procedures and surgeries have high PPVs in the Danish National Patient Registry. PMID:27940630

  1. Nucleosynthesis in the accretion disks of Type II collapsars

    NASA Astrophysics Data System (ADS)

    Banerjee, Indrani; Mukhopadhyay, Banibrata

    2013-09-01

    We investigate nucleosynthesis inside the gamma-ray burst (GRB) accretion disks formed by the Type II collapsars. In these collapsars, the core collapse of massive stars first leads to the formation of a proto-neutron star. After that, an outward moving shock triggers a successful supernova. However, the supernova ejecta lacks momentum and within a few seconds the newly formed neutron star gets transformed to a stellar mass black hole via massive fallback. The hydrodynamics of such an accretion disk formed from the fallback material of the supernova ejecta has been studied extensively in the past. We use these well-established hydrodynamic models for our accretion disk in order to understand nucleosynthesis, which is mainly advection dominated in the outer regions. Neutrino cooling becomes important in the inner disk where the temperature and density are higher. The higher the accretion rate (dot M) is, the higher the density and temperature are in the disks. We deal with accretion disks with relatively low accretion rates: 0.001 Msolar s-1 ≲ dot M ≲ 0.01 Msolar s-1 and hence these disks are predominantly advection dominated. We use He-rich and Sirich abundances as the initial condition of nucleosynthesis at the outer disk, and being equipped with the disk hydrodynamics and the nuclear network code, we study the abundance evolution as matter inflows and falls into the central object. We investigate the variation in the nucleosynthesis products in the disk with the change in the initial abundance at the outer disk and also with the change in the mass accretion rate. We report the synthesis of several unusual nuclei like 31P, 39K, 43Sc, 35Cl and various isotopes of titanium, vanadium, chromium, manganese and copper. We also confirm that isotopes of iron, cobalt, nickel, argon, calcium, sulphur and silicon get synthesized in the disk, as shown by previous authors. Much of these heavy elements thus synthesized are ejected from the disk via outflows and hence they

  2. Evaluating the performance of the LPC (Linear Predictive Coding) 2.4 kbps (kilobits per second) processor with bit errors using a sentence verification task

    NASA Astrophysics Data System (ADS)

    Schmidt-Nielsen, Astrid; Kallman, Howard J.

    1987-11-01

    The comprehension of narrowband digital speech with bit errors was tested by using a sentence verification task. The use of predicates that were either strongly or weakly related to the subjects (e.g., A toad has warts./ A toad has eyes.) varied the difficulty of the verification task. The test conditions included unprocessed and processed speech using a 2.4 kb/s (kilobits per second) linear predictive coding (LPC) voice processing algorithm with random bit error rates of 0 percent, 2 percent, and 5 percent. In general, response accuracy decreased and reaction time increased with LPC processing and with increasing bit error rates. Weakly related true sentences and strongly related false sentences were more difficult than their counterparts. Interactions between sentence type and speech processing conditions are discussed.

  3. Probing Agn Accretion Physics With Kepler

    NASA Astrophysics Data System (ADS)

    Vogeley, Michael

    We propose to use Kepler observations of a sample of ~100 supermassive black holes at the centers of galaxies (Active Galactic Nuclei; AGN) to test models for accretion physics, to study the relationship between variability and other AGN properties, and to guide methods for detecting and classifying AGN in future time-domain surveys. AGN exhibit optical brightness fluctuations on timescales from below an hour up to many years. These fluctuations are determined by the physics of accretion of matter onto black holes from their galactic environment. By observing variability on timescales down to below an hour, Kepler probes the accretion region on length scales that are too small to be directly imaged using conventional telescopes. Data from this unique time- domain telescope now allow us to test competing models for accretion physics that make different predictions for the statistics of variability. Preliminary work provides strong evidence that models of AGN variability that work on long timescale data are not adequate to describe the full range of fluctuation timescales probed by Kepler. We will analyze the light curves of Kepler AGN that span a large range of luminosity and AGN type, thus allowing study of the relationship between variability and other physical properties. Using methods developed and tested by the Kepler team, we will perform custom post-processing of these light curves to remove known systematics. Statistical analyses of the AGN light curves will include estimation of the Structure Function, which quantifies the correlations of brightness fluctuations, and maximum likelihood light curve reconstruction. Competing models for the stochastic behavior of AGN will be tested to evaluate which models best describe variability of AGN over the full range of timescales probed by Kepler. Correlations between the stochastic model parameters and physical parameters will provide new methods for classification of AGN from their variability and aid in

  4. Cold, clumpy accretion onto an active supermassive black hole.

    PubMed

    Tremblay, Grant R; Oonk, J B Raymond; Combes, Françoise; Salomé, Philippe; O'Dea, Christopher P; Baum, Stefi A; Voit, G Mark; Donahue, Megan; McNamara, Brian R; Davis, Timothy A; McDonald, Michael A; Edge, Alastair C; Clarke, Tracy E; Galván-Madrid, Roberto; Bremer, Malcolm N; Edwards, Louise O V; Fabian, Andrew C; Hamer, Stephen; Li, Yuan; Maury, Anaëlle; Russell, Helen R; Quillen, Alice C; Urry, C Megan; Sanders, Jeremy S; Wise, Michael W

    2016-06-09

    Supermassive black holes in galaxy centres can grow by the accretion of gas, liberating energy that might regulate star formation on galaxy-wide scales. The nature of the gaseous fuel reservoirs that power black hole growth is nevertheless largely unconstrained by observations, and is instead routinely simplified as a smooth, spherical inflow of very hot gas. Recent theory and simulations instead predict that accretion can be dominated by a stochastic, clumpy distribution of very cold molecular clouds--a departure from the 'hot mode' accretion model--although unambiguous observational support for this prediction remains elusive. Here we report observations that reveal a cold, clumpy accretion flow towards a supermassive black hole fuel reservoir in the nucleus of the Abell 2597 Brightest Cluster Galaxy (BCG), a nearby (redshift z = 0.0821) giant elliptical galaxy surrounded by a dense halo of hot plasma. Under the right conditions, thermal instabilities produce a rain of cold clouds that fall towards the galaxy's centre, sustaining star formation amid a kiloparsec-scale molecular nebula that is found at its core. The observations show that these cold clouds also fuel black hole accretion, revealing 'shadows' cast by the molecular clouds as they move inward at about 300 kilometres per second towards the active supermassive black hole, which serves as a bright backlight. Corroborating evidence from prior observations of warmer atomic gas at extremely high spatial resolution, along with simple arguments based on geometry and probability, indicate that these clouds are within the innermost hundred parsecs of the black hole, and falling closer towards it.

  5. Cold, clumpy accretion onto an active supermassive black hole

    NASA Astrophysics Data System (ADS)

    Tremblay, Grant R.; Oonk, J. B. Raymond; Combes, Françoise; Salomé, Philippe; O'Dea, Christopher P.; Baum, Stefi A.; Voit, G. Mark; Donahue, Megan; McNamara, Brian R.; Davis, Timothy A.; McDonald, Michael A.; Edge, Alastair C.; Clarke, Tracy E.; Galván-Madrid, Roberto; Bremer, Malcolm N.; Edwards, Louise O. V.; Fabian, Andrew C.; Hamer, Stephen; Li, Yuan; Maury, Anaëlle; Russell, Helen R.; Quillen, Alice C.; Urry, C. Megan; Sanders, Jeremy S.; Wise, Michael W.

    2016-06-01

    Supermassive black holes in galaxy centres can grow by the accretion of gas, liberating energy that might regulate star formation on galaxy-wide scales. The nature of the gaseous fuel reservoirs that power black hole growth is nevertheless largely unconstrained by observations, and is instead routinely simplified as a smooth, spherical inflow of very hot gas. Recent theory and simulations instead predict that accretion can be dominated by a stochastic, clumpy distribution of very cold molecular clouds—a departure from the ‘hot mode’ accretion model—although unambiguous observational support for this prediction remains elusive. Here we report observations that reveal a cold, clumpy accretion flow towards a supermassive black hole fuel reservoir in the nucleus of the Abell 2597 Brightest Cluster Galaxy (BCG), a nearby (redshift z = 0.0821) giant elliptical galaxy surrounded by a dense halo of hot plasma. Under the right conditions, thermal instabilities produce a rain of cold clouds that fall towards the galaxy’s centre, sustaining star formation amid a kiloparsec-scale molecular nebula that is found at its core. The observations show that these cold clouds also fuel black hole accretion, revealing ‘shadows’ cast by the molecular clouds as they move inward at about 300 kilometres per second towards the active supermassive black hole, which serves as a bright backlight. Corroborating evidence from prior observations of warmer atomic gas at extremely high spatial resolution, along with simple arguments based on geometry and probability, indicate that these clouds are within the innermost hundred parsecs of the black hole, and falling closer towards it.

  6. A public code for general relativistic, polarised radiative transfer around spinning black holes

    NASA Astrophysics Data System (ADS)

    Dexter, Jason

    2016-10-01

    Ray tracing radiative transfer is a powerful method for comparing theoretical models of black hole accretion flows and jets with observations. We present a public code, GRTRANS, for carrying out such calculations in the Kerr metric, including the full treatment of polarised radiative transfer and parallel transport along geodesics. The code is written in FORTRAN 90 and efficiently parallelises with OPENMP, and the full code and several components have PYTHON interfaces. We describe several tests which are used for verifiying the code, and we compare the results for polarised thin accretion disc and semi-analytic jet problems with those from the literature as examples of its use. Along the way, we provide accurate fitting functions for polarised synchrotron emission and transfer coefficients from thermal and power-law distribution functions, and compare results from numerical integration and quadrature solutions of the polarised radiative transfer equations. We also show that all transfer coefficients can play an important role in predicted images and polarisation maps of the Galactic centre black hole, Sgr A*, at submillimetre wavelengths.

  7. Software Released by LEWICE 2.0 Ice Accretion Software Development Project

    NASA Technical Reports Server (NTRS)

    Potapczuk, Mark G.

    2000-01-01

    Computational icing simulation methods are making the transition from the realm of research to commonplace use in design and certification. As such, standards of software management, design, validation, and documentation must be adjusted to accommodate the increased expectations of the user community with respect to accuracy, reliability, capability, and usability. With this in mind, in collaboration with Glenn's Engineering Design and Analysis Division, the Icing Branch of the NASA Glenn Research Center at Lewis Field began a software improvement project focused on the two-dimensional ice accretion simulation tool LEWICE. This project is serving as an introduction to the concepts of software management and is intended to serve as a pilot project for future icing simulation code development. The LEWICE 2.0 Software Development Project consisted of two major elements: software management and software validation. The software management element consisted of identifying features of well-designed and well-managed software that are appropriate for an analytical prediction tool such as LEWICE and applying them to a revised version of the code. This element included tasks such as identification of software requirements, development and implementation of coding standards, and implementation of software revision control practices. With the application of these techniques, the LEWICE ice accretion code became a more stable and reliable software product. In addition, the lessons learned about software development and maintenance can be factored into future software projects at the outset. The software validation activity was an integral part of our effort to make LEWICE a more accurate and reliable analysis tool. Because of the efforts taken to extensively validate this software, LEWICE 2.0 is more robust than previous releases and can reproduce results accurately across several computing platforms. It also differs from previous versions in the extensive quantitative

  8. [Cloning of full-length coding sequence of tree shrew CD4 and prediction of its molecular characteristics].

    PubMed

    Tian, Wei-Wei; Gao, Yue-Dong; Guo, Yan; Huang, Jing-Fei; Xiao, Chang; Li, Zuo-Sheng; Zhang, Hua-Tang

    2012-02-01

    The tree shrews, as an ideal animal model receiving extensive attentions to human disease research, demands essential research tools, in particular cellular markers and monoclonal antibodies for immunological studies. In this paper, a 1 365 bp of the full-length CD4 cDNA encoding sequence was cloned from total RNA in peripheral blood of tree shrews, the sequence completes two unknown fragment gaps of tree shrews predicted CD4 cDNA in the GenBank database, and its molecular characteristics were analyzed compared with other mammals by using biology software such as Clustal W2.0 and so forth. The results showed that the extracellular and intracellular domains of tree shrews CD4 amino acid sequence are conserved. The tree shrews CD4 amino acid sequence showed a close genetic relationship with Homo sapiens and Macaca mulatta. Most regions of the tree shrews CD4 molecule surface showed positive charges as humans. However, compared with CD4 extracellular domain D1 of human, CD4 D1 surface of tree shrews showed more negative charges, and more two N-glycosylation sites, which may affect antibody binding. This study provides a theoretical basis for the preparation and functional studies of CD4 monoclonal antibody.

  9. Thin accretion discs are stabilized by a strong magnetic field

    NASA Astrophysics Data System (ADS)

    Sądowski, Aleksander

    2016-07-01

    By studying three-dimensional, radiative, global simulations of sub-Eddington, geometrically thin (H/R ≈ 0.15) black hole accretion flows we show that thin discs which are dominated by magnetic pressure are stable against thermal instability. Such discs are thicker than predicted by the standard model and show significant amount of dissipation inside the marginally stable orbit. Radiation released in this region, however, does not escape to infinity but is advected into the black hole. We find that the resulting accretion efficiency (5.5 ± 0.5 per cent for the simulated 0.8dot{M}_Edd disc) is very close to the predicted by the standard model (5.7 per cent).

  10. Temporal Uncertainty and Temporal Estimation Errors Affect Insular Activity and the Frontostriatal Indirect Pathway during Action Update: A Predictive Coding Study

    PubMed Central

    Limongi, Roberto; Pérez, Francisco J.; Modroño, Cristián; González-Mora, José L.

    2016-01-01

    Action update, substituting a prepotent behavior with a new action, allows the organism to counteract surprising environmental demands. However, action update fails when the organism is uncertain about when to release the substituting behavior, when it faces temporal uncertainty. Predictive coding states that accurate perception demands minimization of precise prediction errors. Activity of the right anterior insula (rAI) is associated with temporal uncertainty. Therefore, we hypothesize that temporal uncertainty during action update would cause the AI to decrease the sensitivity to ascending prediction errors. Moreover, action update requires response inhibition which recruits the frontostriatal indirect pathway associated with motor control. Therefore, we also hypothesize that temporal estimation errors modulate frontostriatal connections. To test these hypotheses, we collected fMRI data when participants performed an action-update paradigm within the context of temporal estimation. We fit dynamic causal models to the imaging data. Competing models comprised the inferior occipital gyrus (IOG), right supramarginal gyrus (rSMG), rAI, right presupplementary motor area (rPreSMA), and the right striatum (rSTR). The winning model showed that temporal uncertainty drove activity into the rAI and decreased insular sensitivity to ascending prediction errors, as shown by weak connectivity strength of rSMG→rAI connections. Moreover, temporal estimation errors weakened rPreSMA→rSTR connections and also modulated rAI→rSTR connections, causing the disruption of action update. Results provide information about the neurophysiological implementation of the so-called horse-race model of action control. We suggest that, contrary to what might be believed, unsuccessful action update could be a homeostatic process that represents a Bayes optimal encoding of uncertainty. PMID:27445737

  11. Temporal Uncertainty and Temporal Estimation Errors Affect Insular Activity and the Frontostriatal Indirect Pathway during Action Update: A Predictive Coding Study.

    PubMed

    Limongi, Roberto; Pérez, Francisco J; Modroño, Cristián; González-Mora, José L

    2016-01-01

    Action update, substituting a prepotent behavior with a new action, allows the organism to counteract surprising environmental demands. However, action update fails when the organism is uncertain about when to release the substituting behavior, when it faces temporal uncertainty. Predictive coding states that accurate perception demands minimization of precise prediction errors. Activity of the right anterior insula (rAI) is associated with temporal uncertainty. Therefore, we hypothesize that temporal uncertainty during action update would cause the AI to decrease the sensitivity to ascending prediction errors. Moreover, action update requires response inhibition which recruits the frontostriatal indirect pathway associated with motor control. Therefore, we also hypothesize that temporal estimation errors modulate frontostriatal connections. To test these hypotheses, we collected fMRI data when participants performed an action-update paradigm within the context of temporal estimation. We fit dynamic causal models to the imaging data. Competing models comprised the inferior occipital gyrus (IOG), right supramarginal gyrus (rSMG), rAI, right presupplementary motor area (rPreSMA), and the right striatum (rSTR). The winning model showed that temporal uncertainty drove activity into the rAI and decreased insular sensitivity to ascending prediction errors, as shown by weak connectivity strength of rSMG→rAI connections. Moreover, temporal estimation errors weakened rPreSMA→rSTR connections and also modulated rAI→rSTR connections, causing the disruption of action update. Results provide information about the neurophysiological implementation of the so-called horse-race model of action control. We suggest that, contrary to what might be believed, unsuccessful action update could be a homeostatic process that represents a Bayes optimal encoding of uncertainty.

  12. Accretion Flow in the inner Accretion Discs of Cataclysmic Variables

    NASA Astrophysics Data System (ADS)

    Balman, Solen; Revnivtsev, Mikhail

    2012-07-01

    We study nature of time variability of brightness of non-magnetic cataclysmic variables. We show that lightcurtves of all analyzed DN systems in UV and X-ray energy bands demonstrate band limited noise, which can be adequately described in the framework of the model of propagating fluctuations. The frequency of the break indicates the inner disc truncation with a range of radii (10-3)e+9 cm. We analyse the RXTE and optical (RTT150) data of SS Cyg in outburst and quiescence which show that during the outburst the inner disk radius moves towards the white dwarf and receeds as the outburst declines to quiescence. Cross-correlations between the simultaneous UV and X-ray light curves find time lags in the X-rays of 90-180 sec consistent with travel time of matter from a truncated inner disc to the white dwarf surface. This suggests that DN and other plausible nonmagnetic systems have truncated accretion discs indicating that the accretion may occur through coronal flows in the disc. We compare and contrast magnetic and nonmagnetic systems in terms of their aperiodic noise characteristics and the model of propagating fluctuations. The comparison of the X-ray/UV time lag observed by us in the case of non-magnetic CVs with those, detected for magnetic CVs allows us to make an rough estimate of the viscosity parameter. Multi band simultaneous observations of coming observattories like ASTROSAT will give us the opportunity to study time variability of brightness variations of accretion disks in cataclysmic variables in quiescence and outburst using LAXPC and UVIT/OPT instruments. We will elaborate on the nature and possible outcomes of such research.

  13. Angular momentum transport in thin accretion disks and intermittent accretion.

    PubMed

    Coppi, B; Coppi, P S

    2001-07-30

    The plasma modes, transporting angular momentum in accretion disks, under minimally restrictive conditions when the magnetic energy density is significant relative to the thermal energy density, are shown to be singular if the ideal MHD approximation is adopted. A similarity with the modes producing magnetic reconnection in current carrying plasmas is established. The combined effects of finite plasma temperature, of plasma compressibility, of the gradient of the rotation frequency, and of appropriate transport processes (outside ideal MHD) are involved in the onset of these nonaxisymmetric and locally corotating modes.

  14. A simple accretion model of a rotating gas sphere onto a Schwarzschild black hole

    NASA Astrophysics Data System (ADS)

    Huerta, E. A.; Mendoza, S.

    2007-04-01

    We construct a simple accretion model of a rotating gas sphere onto a Schwarzschild black hole. We show how to build analytic solutions in terms of Jacobi elliptic functions. This construction represents a general relativistic generalisation of the Newtonian accretion model first proposed by Ulrich (1976). In exactly the same form as it occurs for the Newtonian case, the flow naturally predicts the existence of an equatorial rotating accretion disc about the hole. However, the radius of the disc increases monotonically without limit as the flow reaches its minimum allowed angular momentum for this particular model.

  15. A LAGRANGIAN INTEGRATOR FOR PLANETARY ACCRETION AND DYNAMICS (LIPAD)

    SciTech Connect

    Levison, Harold F.; Duncan, Martin J.; Thommes, Edward

    2012-10-01

    We present the first particle-based Lagrangian code that can follow the collisional/accretional/dynamical evolution of a large number of kilometer-sized planetesimals through the entire growth process of becoming planets. We refer to it as the Lagrangian Integrator for Planetary Accretion and Dynamics or LIPAD. LIPAD is built on top of SyMBA, which is a symplectic N-body integrator. In order to handle the very large number of planetesimals required by planet formation simulations, we introduce the concept of a tracer particle. Each tracer is intended to represent a large number of disk particles on roughly the same orbit and size as one another and is characterized by three numbers: the physical radius, the bulk density, and the total mass of the disk particles represented by the tracer. We developed statistical algorithms that follow the velocity and size evolution of the tracers due to close gravitational encounters and physical collisions with one another. The tracers mainly dynamically interact with the larger objects (planetary embryos) in the normal N-body way. LIPAD's greatest strength is that it can accurately model the wholesale redistribution of planetesimals due to gravitational interaction with the embryos, which has recently been shown to significantly affect the growth rate of planetary embryos. We verify the code via a comprehensive set of tests that compare our results with those of Eulerian and/or direct N-body codes.

  16. Chondrule Accretion with a Growing Protoplanet

    NASA Astrophysics Data System (ADS)

    Matsumoto, Yuji; Oshino, Shoichi; Hasegawa, Yasuhiro; Wakita, Shigeru

    2017-03-01

    Chondrules are primitive materials in the solar system. They were formed in about the first 3 Myr of the solar system’s history. This timescale is longer than that of Mars formation, and it is conceivable that protoplanets, planetesimals, and chondrules might have existed simultaneously in the solar nebula. Due to protoplanets’ perturbation on the planetesimal dynamics and chondrule accretion on them, all the formed chondrules are unlikely to be accreted by the planetesimals. We investigate the amount of chondrules accreted by planetesimals in such a condition. We assume that a protoplanet is in oligarchic growth, and we perform analytical calculations of chondrule accretion by both a protoplanet and planetesimals. Through the oligarchic growth stage, planetesimals accrete about half of the formed chondrules. The smallest planetesimals get the largest amount of chondrules, compared with the amount accreted by more massive planetesimals. We perform a parameter study and find that this fraction is not greatly changed for a wide range of parameter sets.

  17. Unveiling slim accretion disc in AGN through X-ray and Infrared observations

    NASA Astrophysics Data System (ADS)

    Castelló-Mor, Núria; Kaspi, Shai; Netzer, Hagai; Du, Pu; Hu, Chen; Ho, Luis C.; Bai, Jin-Ming; Bian, Wei-Hao; Yuan, Ye-Fei; Wang, Jian-Min

    2017-01-01

    In this work, which is a continuation of Castello-Mor et al. (2016), we present new X-ray and infrared (IR) data for a sample of active galactic nuclei (AGN) covering a wide range in Eddington ratio over a small luminosity range. In particular, we rigorously explore the dependence of the optical-to-X-ray spectral index αOX and the IR-to-optical spectral index on the dimensionless accretion rate, dot{M}=dot{m}/η where dot{m}=LAGN/LEdd and η is the mass-to-radiation conversion efficiency, in low and high accretion rate sources. We find that the SED of the faster accreting sources are surprisingly similar to those from the comparison sample of sources with lower accretion rate. In particular: I) the optical-to-UV AGN SED of slow and fast accreting AGN can be fitted with thin AD models. II) The value of αOX is very similar in slow and fast accreting systems up to a dimensionless accretion rate dot{M}c ˜10. We only find a correlation between αOX and dot{M} for sources with dot{M}>dot{M}c. In such cases, the faster accreting sources appear to have systematically larger αOX values. III) We also find that the torus in the faster accreting systems seems to be less efficient in reprocessing the primary AGN radiation having lower IR-to-optical spectral slopes. These findings, failing to recover the predicted differences between the SEDs of slim and thin ADs within the observed spectral window, suggest that additional physical processes or very special geometry act to reduce the extreme UV radiation in fast accreting AGN. This may be related to photon trapping, strong winds, and perhaps other yet unknown physical processes.

  18. Theory of protostellar accretion disks

    NASA Technical Reports Server (NTRS)

    Ruden, S.

    1994-01-01

    I will present an overview of the current paradigm for the theory of gaseous accretion disks around young stars. Protostellar disks form from the collapse of rotating molecular cloud cores. The disks evolve via outward angular momentum transport provided by several mechanisms: gravitational instabilities, thermal convective turbulence, and magnetic stresses. I will review the conditions under which these mechanisms are efficient and consistent with the observed disk evolutionary timescales of several million years. Time permitting, I will discuss outbursts in protostellar disks (FU Orionis variables), the effect of planet formation on disk structure, and the dispersal of remnant gas.

  19. Accretion Onto Magnetic Degenerate Stars

    NASA Technical Reports Server (NTRS)

    Frank, Juhan

    2000-01-01

    While the original objectives of this research program included the study of radiative processes in cataclysmic variables and the evolution of neutron star magnetic fields, the scope of the reported research expanded to other related topics as this project developed. This final report therefore describes the results of our research in the following areas: 1) Irradiation-driven mass transfer cycles in cataclysmic variables and low-mass X-ray binaries; 2) Propeller effect and magnetic field decay in isolated old neutron stars; 3) Decay of surface magnetic fields in accreting neutron stars and pulsars; 4) Finite-Difference Hydrodynamic simulations of mass transfer in binary stars.

  20. Disk tides and accretion runaway

    NASA Technical Reports Server (NTRS)

    Ward, William R.; Hahn, Joseph M.

    1995-01-01

    It is suggested that tidal interaction of an accreting planetary embryo with the gaseous preplanetary disk may provide a mechanism to breach the so-called runaway limit during the formation of the giant planet cores. The disk tidal torque converts a would-be shepherding object into a 'predator,' which can continue to cannibalize the planetesimal disk. This is more likely to occur in the giant planet region than in the terrestrial zone, providing a natural cause for Jupiter to predate the inner planets and form within the O(10(exp 7) yr) lifetime of the nebula.

  1. Reaction rate and composition dependence of the stability of thermonuclear burning on accreting neutron stars

    SciTech Connect

    Keek, L.; Cyburt, R. H.; Heger, A.

    2014-06-01

    The stability of thermonuclear burning of hydrogen and helium accreted onto neutron stars is strongly dependent on the mass accretion rate. The burning behavior is observed to change from Type I X-ray bursts to stable burning, with oscillatory burning occurring at the transition. Simulations predict the transition at a 10 times higher mass accretion rate than observed. Using numerical models we investigate how the transition depends on the hydrogen, helium, and CNO mass fractions of the accreted material, as well as on the nuclear reaction rates of 3α and the hot-CNO breakout reactions {sup 15}O(α, γ){sup 19}Ne and {sup 18}Ne(α, p){sup 21}Na. For a lower hydrogen content the transition is at higher accretion rates. Furthermore, most experimentally allowed reaction rate variations change the transition accretion rate by at most 10%. A factor 10 decrease of the {sup 15}O(α, γ){sup 19}Ne rate, however, produces an increase of the transition accretion rate of 35%. None of our models reproduce the transition at the observed rate, and depending on the true {sup 15}O(α, γ){sup 19}Ne reaction rate, the actual discrepancy may be substantially larger. We find that the width of the interval of accretion rates with marginally stable burning depends strongly on both composition and reaction rates. Furthermore, close to the stability transition, our models predict that X-ray bursts have extended tails where freshly accreted fuel prolongs nuclear burning.

  2. Accretion, Early Thermal State and Differentiation of Icy Satellites

    NASA Astrophysics Data System (ADS)

    Monteux, J.; Tobie, G.; Choblet, G.; Le Feuvre, M.

    2011-10-01

    For a better understanding of the thermal evolution of a growing icy satellite and of the conditions under which melting may occur, we developed a three-dimensional numerical model based on the Oedipus code, initially developed to solve the equations of thermal convection in a spherical geometry [11]. This numerical model characterizes the thermal evolution of an icy satellite during its accretion from a variety of plausible impactor population. For each impact, we consider the thermal effects due to the dissipation of the impactor's kinetic energy: After an impact, temperature locally increases deep in the impacted growing object and within the shallow ejecta blanket. As the icy moon grows, gravitational forces increase and impacts become more and more energetic. As the temperature increases below the impact site is proportional to the impact velocity, melting events areexpected tooccur at the end of the accretion once the icy moon reaches a critical size. In order to constrain this critical size, we simulate the growth and thermal evolution of icy bodies from a kilometer-size initial undifferentiated body to a size of order 2500 km from various populations of undifferentiated icy impactors and by assuming different orbital configurations for the growing body and different accretion rates. Preliminary results will be presented.

  3. Constraining the Accretion Mode in LINER 1.9s

    NASA Astrophysics Data System (ADS)

    Sabra, Bassem; Der Sahaguian, Elias; Badr, Elie

    2016-01-01

    The accretion mode and the dominant power source in low-ionization nuclear emission-line regions (LINERs), a class of active galactic nuclei (AGN), are still elusive. We focus on a sample of 22 LINER 1.9s (Ho et al. 1997), a subclass of LINERs that show broad Halpha lines, a signature of blackhole-powered accretion, to test the hypothesis that the ionizing continuum emitted by a radiatively inefficient accretion flow (RIAF) could lead to the LINER ultraviolet (UV) emission-line ratios. Optical line-ratio diagrams are a weak diagnostic tool in distinguishing between possible power sources (Sabra et al. 2003). We search the Mikulski Archive for Space Telescopes (MAST) for UV spectra of the objects in the above sample and also perform photoionization simulations using CLOUDY (Ferland et al. 2013). Unfortunately, only one object (NGC 1052; Gabel et al. 2000) of the 22 LINER 1.9s has UV spectra that cover many emission lines; the rest of the objects either do not have any UV spectra, the spectral coverage is in-adequate, or the spectra have very low signal-to-noise ratios. Our photoionization simulations set up two identical grids of clouds with a range of densities and ionization parameters. We illuminate one grid with radiation emitted by a thin accretion disk (AD) and we illuminate the other grid with radiation from a RIAF. We overplot the UV emission-line ratio predictions for AD and RIAF illumination, together with the available line ratios for NGC 1052. Initial results show that UV lines could be used as diagnostics for the accretion mode in AGN. More UV spectral coverage of LINER 1.9s is needed in order to more fully utilize the diagnostic powers of UV emission line ratios.

  4. RINGED ACCRETION DISKS: EQUILIBRIUM CONFIGURATIONS

    SciTech Connect

    Pugliese, D.; Stuchlík, Z. E-mail: zdenek.stuchlik@physics.cz

    2015-12-15

    We investigate a model of a ringed accretion disk, made up by several rings rotating around a supermassive Kerr black hole attractor. Each toroid of the ringed disk is governed by the general relativity hydrodynamic Boyer condition of equilibrium configurations of rotating perfect fluids. Properties of the tori can then be determined by an appropriately defined effective potential reflecting the background Kerr geometry and the centrifugal effects. The ringed disks could be created in various regimes during the evolution of matter configurations around supermassive black holes. Therefore, both corotating and counterrotating rings have to be considered as being a constituent of the ringed disk. We provide constraints on the model parameters for the existence and stability of various ringed configurations and discuss occurrence of accretion onto the Kerr black hole and possible launching of jets from the ringed disk. We demonstrate that various ringed disks can be characterized by a maximum number of rings. We present also a perturbation analysis based on evolution of the oscillating components of the ringed disk. The dynamics of the unstable phases of the ringed disk evolution seems to be promising in relation to high-energy phenomena demonstrated in active galactic nuclei.

  5. Nonlinear variations in axisymmetric accretion

    NASA Astrophysics Data System (ADS)

    Bose, Soumyajit; Sengupta, Anindya; Ray, Arnab K.

    2014-05-01

    We subject the stationary solutions of inviscid and axially symmetric rotational accretion to a time-dependent radial perturbation, which includes nonlinearity to any arbitrary order. Regardless of the order of nonlinearity, the equation of the perturbation bears a form that is similar to the metric equation of an analogue acoustic black hole. We bring out the time dependence of the perturbation in the form of a Liénard system by requiring the perturbation to be a standing wave under the second order of nonlinearity. We perform a dynamical systems analysis of the Liénard system to reveal a saddle point in real time, whose implication is that instabilities will develop in the accreting system when the perturbation is extended into the nonlinear regime. We also model the perturbation as a high-frequency traveling wave and carry out a Wentzel-Kramers-Brillouin analysis, treating nonlinearity iteratively as a very feeble effect. Under this approach, both the amplitude and the energy flux of the perturbation exhibit growth, with the acoustic horizon segregating the regions of stability and instability.

  6. PROPERTIES OF GRAVITOTURBULENT ACCRETION DISKS

    SciTech Connect

    Rafikov, Roman R.

    2009-10-10

    We explore the properties of cold gravitoturbulent accretion disks-non-fragmenting disks hovering on the verge of gravitational instability (GI)-using a realistic prescription for the effective viscosity caused by gravitational torques. This prescription is based on a direct relationship between the angular momentum transport in a thin accretion disk and the disk cooling in a steady state. Assuming that opacity is dominated by dust we are able to self-consistently derive disk properties for a given M-dot assuming marginal gravitational stability. We also allow external irradiation of the disk and account for a non-zero background viscosity, which can be due to the magneto-rotational instability. Spatial transitions between different co-existing disk states (e.g., between irradiated and self-luminous or between gravitoturbulent and viscous) are described and the location of the boundary at which the disk must fragment is determined in a variety of situations. We demonstrate in particular that at low enough M-dot external irradiation stabilizes the gravitoturbulent disk against fragmentation to very large distances thus providing means of steady mass transport to the central object. Implications of our results for the possibility of planet formation by GI in protoplanetary disks and star formation in the Galactic center and for the problem of feeding supermassive black holes in galactic nuclei are discussed.

  7. A Simple test for the existence of two accretion modes in active galactic nuclei

    SciTech Connect

    Jester, Sebastian; /Fermilab

    2005-02-01

    By analogy to the different accretion states observed in black-hole X-ray binaries (BHXBs), it appears plausible that accretion disks in active galactic nuclei (AGN) undergo a state transition between a radiatively efficient and inefficient accretion flow. If the radiative efficiency changes at some critical accretion rate, there will be a change in the distribution of black hole masses and bolometric luminosities at the corresponding transition luminosity. To test this prediction, the author considers the joint distribution of AGN black hole masses and bolometric luminosities for a sample taken from the literature. The small number of objects with low Eddington-scaled accretion rates m < 0.01 and black hole masses M{sub BH} < 10{sup 9} M{sub {circle_dot}} constitutes tentative evidence for the existence of such a transition in AGN. Selection effects, in particular those associated with flux-limited samples, systematically exclude objects in particular regions of the (M{sub BH}, L{sub bol}) plane. Therefore, they require particular attention in the analysis of distributions of black hole mass, bolometric luminosity, and derived quantities like the accretion rate. The author suggests further observational tests of the BHXB-AGN unification scheme which are based on the jet domination of the energy output of BHXBs in the hard state, and on the possible equivalence of BHXB in the very high (or steep power-law) state showing ejections and efficiently accreting quasars and radio galaxies with powerful radio jets.

  8. Face-on accretion onto a protoplanetary disc

    NASA Astrophysics Data System (ADS)

    Wijnen, T. P. G.; Pols, O. R.; Pelupessy, F. I.; Portegies Zwart, S.

    2016-10-01

    Context. Stars are generally born in clustered stellar environments, which can affect their subsequent evolution. An example of this environmental influence can be found in globular clusters (GCs) harbouring multiple stellar populations. An evolutionary scenario in which a second (and possibly higher order) population is formed by the accretion of chemically enriched material onto the low-mass stars in the initial GC population has been suggested to explain the multiple stellar populations. The idea, dubbed early disc accretion, is that the low-mass, pre-main-sequence stars sweep up gas expelled by the more massive stars of the same generation into their protoplanetary disc as they move through the cluster core. The same process could also occur, to a lesser extent, in embedded stellar systems that are less dense. Aims: Using assumptions that represent the (dynamical) conditions in a typical GC, we investigate whether a low-mass star of 0.4 M⊙ surrounded by a protoplanetary disc can accrete a sufficient amount of enriched material to account for the observed abundances in so-called second generation GC stars. In particular, we focus on the gas-loading rate onto the disc and star, as well as on the lifetime and stability of the disc. Methods: We perform simulations at multiple resolutions with two different smoothed particle hydrodynamics codes and compare the results. Each code uses a different implementation of the artificial viscosity. Results: We find that the gas-loading rate is about a factor of two smaller than the rate based on geometric arguments, because the effective cross-section of the disc is smaller than its surface area. Furthermore, the loading rate is consistent for both codes, irrespective of resolution. Although the disc gains mass in the high-resolution runs, it loses angular momentum on a timescale of 104 yr. Two effects determine the loss of (specific) angular momentum in our simulations: (1) continuous ram pressure stripping and (2

  9. Radiative, two-temperature simulations of low-luminosity black hole accretion flows in general relativity

    NASA Astrophysics Data System (ADS)

    Sądowski, Aleksander; Wielgus, Maciek; Narayan, Ramesh; Abarca, David; McKinney, Jonathan C.; Chael, Andrew

    2017-04-01

    We present a numerical method that evolves a two-temperature, magnetized, radiative, accretion flow around a black hole, within the framework of general relativistic radiation magnetohydrodynamics. As implemented in the code KORAL, the gas consists of two sub-components - ions and electrons - which share the same dynamics but experience independent, relativistically consistent, thermodynamical evolution. The electrons and ions are heated independently according to a prescription from the literature for magnetohydrodynamical turbulent dissipation. Energy exchange between the particle species via Coulomb collisions is included. In addition, electrons gain and lose energy and momentum by absorbing and emitting synchrotron and bremsstrahlung radiation and through Compton scattering. All evolution equations are handled within a fully covariant framework in the relativistic fixed-metric space-time of the black hole. Numerical results are presented for five models of low-luminosity black hole accretion. In the case of a model with a mass accretion rate dot{M}˜ 4× 10^{-8} dot{M}_Edd, we find that radiation has a negligible effect on either the dynamics or the thermodynamics of the accreting gas. In contrast, a model with a larger dot{M}˜ 4× 10^{-4} dot{M}_Edd behaves very differently. The accreting gas is much cooler and the flow is geometrically less thick, though it is not quite a thin accretion disc.

  10. rHARM: Accretion and Ejection in Resistive GR-MHD

    NASA Astrophysics Data System (ADS)

    Qian, Qian; Fendt, Christian; Noble, Scott; Bugli, Matteo

    2017-01-01

    Turbulent magnetic diffusivity plays an important role for accretion disks and the launching of disk winds. We have implemented magnetic diffusivity and respective resistivity in the general relativistic MHD code HARM. This paper describes the theoretical background of our implementation, its numerical realization, our numerical tests, and preliminary applications. The test simulations of the new code rHARM are compared to an analytic solution of the diffusion equation and a classical shock tube problem. We have further investigated the evolution of the magnetorotational instability (MRI) in tori around black holes (BHs) for a range of magnetic diffusivities. We find an indication for a critical magnetic diffusivity (for our setup) beyond which no MRI develops in the linear regime and for which accretion of torus material to the BH is delayed. Preliminary simulations of magnetically diffusive thin accretion disks around Schwarzschild BHs that are threaded by a large-scale poloidal magnetic field show the launching of disk winds with mass fluxes of about 50% of the accretion rate. The disk magnetic diffusivity allows for efficient disk accretion that replenishes the mass reservoir of the inner disk area and thus allows for long-term simulations of wind launching for more than 5000 time units.

  11. Self-Consistent Thermal Accretion Disk Corona Models for Compact Objects. I: Properties of the Corona and the Spectrum of Escaping Radiation

    NASA Technical Reports Server (NTRS)

    Dove, James B.; Wilms, Jorn; Begelman, Mitchell C.

    1997-01-01

    We present the properties of accretion disk corona (ADC) models in which the radiation field, the temperature, and the total opacity of the corona are determined self-consistently. We use a nonlinear Monte Carlo code to perform the calculations. As an example, we discuss models in which the corona is situated above and below a cold accretion disk with a plane-parallel (slab) geometry, similar to the model of Haardt & Maraschi. By Comptonizing the soft radiation emitted by the accretion disk, the corona is responsible for producing the high-energy component of the escaping radiation. Our models include the reprocessing of radiation in the accretion disk. Here the photons either are Compton-reflected or photoabsorbed, giving rise to fluorescent line emission and thermal emission. The self- consistent coronal temperature is determined by balancing heating (due to viscous energy dissipation) with Compton cooling, determined using the fully relativistic, angle-dependent cross sections. The total opacity is found by balancing pair productions with annihilations. We find that, for a disk temperature kT(sub BB) approx. less than 200 eV, these coronae are unable to have a self-consistent temperature higher than approx. 140 keV if the total optical depth is approx. less than 0.2, regardless of the compactness parameter of the corona and the seed opacity. This limitation corresponds to the angle-averaged spectrum of escaping radiation having a photon index approx. greater than 1.8 within the 5-30 keV band. Finally, all models that have reprocessing features also predict a large thermal excess at lower energies. These constraints make explaining the X-ray spectra of persistent black hole candidates with ADC models very problematic.

  12. Laboratory experiments on Radiative Shocks relevant to Stellar Accretion

    NASA Astrophysics Data System (ADS)

    Chaulagain, Uddhab

    2015-08-01

    Radiative shocks are strong shocks which are characterized by a plasma at high temperatures emitting an important fraction of its energy as radiation. Radiative shocks are found in many astrophysical systems, including stellar accretion shocks, supernovae remnants, jet driven shocks, etc. In the case of stellar accretion, matter is funneled into accretion columns by the stellar magnetic field, and falls at several hundreds km/s from the circumstellar envelope onto the stellar photosphere. This generates a strong radiative shock with x-ray spectral signatures that are a key ingredient to quantify the mass accretion rate. The physical structure and dynamics of such plasmas is complex, and experimental benchmarks are needed to provide a deeper understanding of the physics at play.Recently, radiative shocks have also been produced experimentally using high energy lasers. We discuss the results of an experiment performed on the Prague Asterix Laser System (PALS) facility. Shocks are generated by focusing the PALS Infrared laser beam on millimetre-scale targets filled with xenon gas at low pressure. The shock that is generated then propagates in the gas with a sufficiently high velocity such that the shock is in a radiative flux dominated regime. We will present the first instantaneous imaging of a radiative shock at 21.2 nm which is characterized by the presence of both the radiative precursor and the post shock structure. These results are complemented with time-and-space resolved XUV plasma self-emission measurements using fast diodes. Interpretation of the data, supported by numerical simulations using the 2-D radiative-hydrodynamics code ARWEN, will be presented showing the importance of radiative processes from atomic to larger scales.

  13. Evolution of accretion discs around a kerr black hole using extended magnetohydrodynamics

    NASA Astrophysics Data System (ADS)

    Foucart, Francois; Chandra, Mani; Gammie, Charles F.; Quataert, Eliot

    2016-02-01

    Black holes accreting well below the Eddington rate are believed to have geometrically thick, optically thin, rotationally supported accretion discs in which the Coulomb mean free path is large compared to GM/c2. In such an environment, the disc evolution may differ significantly from ideal magnetohydrodynamic (MHD) predictions. We present non-ideal global axisymmetric simulations of geometrically thick discs around a rotating black hole. The simulations are carried out using a new code GRIM, which evolves a covariant extended magnetohydrodynamics model derived by treating non-ideal effects as a perturbation of ideal MHD. Non-ideal effects are modelled through heat conduction along magnetic field lines, and a difference between the pressure parallel and perpendicular to the field lines. The model relies on an effective collisionality in the disc from wave-particle scattering and velocity-space (mirror and firehose) instabilities. We find that the pressure anisotropy grows to match the magnetic pressure, at which point it saturates due to the mirror instability. The pressure anisotropy produces outward angular momentum transport with a magnitude comparable to that of MHD turbulence in the disc, and a significant increase in the temperature in the wall of the jet. We also find that, at least in our axisymmetric simulations, conduction has a small effect on the disc evolution because (1) the heat flux is constrained to be parallel to the field and the field is close to perpendicular to temperature gradients, and (2) the heat flux is choked by an increase in effective collisionality associated with the mirror instability.

  14. Numerical simulation of vertical oscillations in an axisymmetric thick accretion flow around a black hole

    NASA Astrophysics Data System (ADS)

    Deb, Arnab; Giri, Kinsuk; Chakrabarti, Sandip K.

    2016-11-01

    We study time evolution of rotating, axisymmetric, two-dimensional inviscid accretion flows around black holes using a grid-based finite difference method. We do not use reflection symmetry on the equatorial plane in order to inspect if the disc along with the centrifugal barrier oscillated vertically. In the inviscid limit, we find that the CENtrifugal pressure supported BOundary Layer (CENBOL) is oscillating vertically, more so, when the specific angular momentum is higher. As a result, the rate of outflow produced from the CENBOL, also oscillates. Indeed, the outflow rates in the upper half and the lower half are found to be anticorrelated. We repeat the exercise for a series of specific angular momentum λ of the flow in order to demonstrate effects of the centrifugal force on this interesting behaviour. We find that, as predicted in theoretical models of discs in vertical equilibrium, the CENBOL is produced only when the centrifugal force is significant and more specifically, when λ > 1.5. Outflow rate itself is found to increase with λ as well and so is the oscillation amplitude. The cause of oscillation appears to be due to the interaction among the back flow from the centrifugal barrier, the outflowing winds and the inflow. For low angular momentum, the back flow as well as the oscillation are missing. To our knowledge, this is the first time that such an oscillating solution is found with a well-tested grid-based finite difference code, and such a solution could be yet another reason of why quasi-periodic oscillations should be observed in black hole candidates that are accreting low angular momentum transonic flows.

  15. Combining N-body accretion simulations with partitioning experiments in a statistical model of terrestrial planet accretion and core formation

    NASA Astrophysics Data System (ADS)

    Fischer, R. A.; Ciesla, F.; Campbell, A. J.

    2014-12-01

    The terrestrial planets accreted in a series of increasingly large and violent collisions. Simultaneously, metallic cores segregated from their silicate mantles, acquiring their modern compositions through high pressure (P), high temperature (T) partitioning reactions. Here we present a model that couples these aspects of early planetary evolution, building on recent accretion simulations and experimental results. We have run 100 N-body simulations of terrestrial planet accretion, with Jupiter and Saturn on either circular (CJS) or eccentric (EJS) orbits, to gain insight into the statistics of this highly stochastic process (Fischer and Ciesla, 2014). An Earth (Mars) analogue forms in 84-92% (2-10%) of our simulations. We draw on our recent high P-T metal-silicate partitioning experiments of Ni, Co, V, Cr, Si, and O in a diamond anvil cell to 100 GPa and 5500 K. In our model, N-body simulations describe the delivery, masses, and original locations of planetary building blocks. As planets accrete, their core and mantle compositions are modified by high P-T reactions with each collision (Rubie et al., 2011). By utilizing a large number of N-body simulations, we obtain a statistical view and observe a wide range of outcomes. We use this model to predict the core compositions of Earth-like planets. For partial equilibration of the mantle at 50% of the core-mantle boundary (CMB) pressure, we find that their cores contain 6.9 ± 1.8 wt% Si and 4.8 ± 2.3 wt% O (Figure), with this uncertainty due entirely to variations in accretion history in our 100 simulations. This composition is consistent with the seismologically-inferred density of Earth's core, based on comparisons to high P-T equations of state (Fischer et al., 2011, 2014). Earth analogues experience 0.7 ± 0.1 or 0.9 ± 0.2 log units of oxidation during accretion in EJS or CJS simulations respectively, which is due to both the effects of high P-T partitioning and the temporal evolution of the Earth analogue

  16. Gas accretion from the cosmic web in the local Universe

    NASA Astrophysics Data System (ADS)

    Sánchez Almeida, J.; Elmegreen, B. G.; Muñoz-Tuñón, C.; Elmegreen, D. M.

    2016-10-01

    Numerical simulations predict that gas accretion from the cosmic web drives star formation in disks galaxies. The process is important in low mass haloes (< 1012 M⊙), therefore, in the early universe when galaxies were low mass, but also in dwarf galaxies of the local universe. The gas that falls in is predicted to be tenuous, patchy, partly ionized, multi-temperature, and large-scale; therefore, hard to show in a single observation. One of the most compelling cases for gas accretion at work in the local universe comes from the extremely metal poor (XMP) galaxies. They show metallicity inhomogeneities associated with star-forming regions, so that large starbursts have lower metallicity than the underlying galaxy. Here we put forward the case for gas accretion from the web posed by XMP galaxies. Two other observational results are discussed too, namely, the fact that the gas consumption time-scale is shorter than most stellar ages, and the systematic morphological distortions of the HI around galaxies.

  17. Bondi accretion in trumpet geometries

    NASA Astrophysics Data System (ADS)

    Miller, August J.; Baumgarte, Thomas W.

    2017-02-01

    The Bondi solution, which describes the radial inflow of a gas onto a non-rotating black hole, provides a powerful test for numerical relativistic codes. However, the Bondi solution is usually derived in Schwarzschild coordinates, which are not well suited for dynamical spacetime evolutions. Instead, many current numerical relativistic codes adopt moving-puncture coordinates, which render black holes in trumpet geometries. Here we transform the Bondi solution into trumpet coordinates, which result in regular expressions for the fluid flow extending into the black-hole interior. We also evolve these solutions numerically and demonstrate their usefulness for testing and calibrating numerical codes.

  18. Foundations of Black Hole Accretion Disk Theory.

    PubMed

    Abramowicz, Marek A; Fragile, P Chris

    2013-01-01

    This review covers the main aspects of black hole accretion disk theory. We begin with the view that one of the main goals of the theory is to better understand the nature of black holes themselves. In this light we discuss how accretion disks might reveal some of the unique signatures of strong gravity: the event horizon, the innermost stable circular orbit, and the ergosphere. We then review, from a first-principles perspective, the physical processes at play in accretion disks. This leads us to the four primary accretion disk models that we review: Polish doughnuts (thick disks), Shakura-Sunyaev (thin) disks, slim disks, and advection-dominated accretion flows (ADAFs). After presenting the models we discuss issues of stability, oscillations, and jets. Following our review of the analytic work, we take a parallel approach in reviewing numerical studies of black hole accretion disks. We finish with a few select applications that highlight particular astrophysical applications: measurements of black hole mass and spin, black hole vs. neutron star accretion disks, black hole accretion disk spectral states, and quasi-periodic oscillations (QPOs).

  19. A brown dwarf mass donor in an accreting binary.

    PubMed

    Littlefair, S P; Dhillon, V S; Marsh, T R; Gänsicke, Boris T; Southworth, John; Watson, C A

    2006-12-08

    A long-standing and unverified prediction of binary star evolution theory is the existence of a population of white dwarfs accreting from substellar donor stars. Such systems ought to be common, but the difficulty of finding them, combined with the challenge of detecting the donor against the light from accretion, means that no donor star to date has a measured mass below the hydrogen burning limit. We applied a technique that allowed us to reliably measure the mass of the unseen donor star in eclipsing systems. We were able to identify a brown dwarf donor star, with a mass of 0.052 +/- 0.002 solar mass. The relatively high mass of the donor star for its orbital period suggests that current evolutionary models may underestimate the radii of brown dwarfs.

  20. Accretion in the galactic halo

    NASA Astrophysics Data System (ADS)

    Stephens, Alex Courtney

    2000-10-01

    The Milky Way disk is enveloped in a diffuse, dynamically-hot collection of stars and star clusters collectively known as the ``stellar halo''. Photometric and chemical analyses suggest that these stars are ancient fossils of the galaxy formation epoch. Yet, little is known about the origin of this trace population. Is this system merely a vestige of the initial burst of star formation within the decoupled proto-Galaxy, or is it the detritus of cannibalized satellite galaxies? In an attempt to unravel the history of the Milky Way's stellar halo, I performed a detailed spectroscopic analysis of 55 metal-poor stars possessing ``extreme'' kinematic properties. It is thought that stars on orbits that either penetrate the remote halo or exhibit large retrograde velocities could have been associated with assimilated (or ``accreted'') dwarf galaxies. The hallmark of an accreted halo star is presumed to be a deficiency (compared with normal stars) of the α-elements (O, Mg, Si, Ca, Ti) with respect to iron, a consequence of sporadic bursts of star formation within the diminutive galaxies. Abundances for a select group of light metals (Li, Na, Mg, Si, Ca, Ti), iron-peak nuclides (Cr, Fe, Ni), and neutron-capture elements (Y, Ba) were calculated using line-strengths measured from high-resolution, high signal-to-noise spectral observations collected with the Keck I 10-m and KPNO 4-m telescopes. The abundances extracted from the spectra reveal: (1)The vast majority of outer halo stars possess supersolar [α/Fe] > 0.0) ratios. (2)The [α/Fe] ratio appears to decrease with increasing metallicity. (3)The outer halo stars have lower ratios of [α/Fe] than inner halo stars at a given metallicity. (4)At the largest metallicities, there is a large spread in the observed [α/Fe] ratios. (5)[α/Fe] anti-correlates with RAPO. (6)Only one star (BD+80° 245) exhibits the peculiar abundances expected of an assimilated star. The general conclusion extracted from these data is that the

  1. Accretion flows onto supermassive black holes

    NASA Technical Reports Server (NTRS)

    Begelman, Mitchell C.

    1988-01-01

    The radiative and hydrodynamic properties of an angular momentum-dominated accretion flow onto a supermassive black hole depend largely on the ratio of the accretion rate to the Eddington accretion rate. High values of this ratio favor optically thick flows which produce largely thermal radiation, while optically thin 'two-temperature' flows may be present in systems with small values of this ratio. Observations of some AGN suggest that thermal and nonthermal sources of radiation may be of comparable importance in the 'central engine'. Consideration is given to the possibilities for coexistence of different modes of accretion in a single flow. One intriguing possibility is that runaway pair production may cause an optically thick 'accretion annulus' to form at the center of a two-temperature inflow.

  2. Genome-Wide Detection of Predicted Non-coding RNAs Related to the Adhesion Process in Vibrio alginolyticus Using High-Throughput Sequencing

    PubMed Central

    Huang, Lixing; Hu, Jiao; Su, Yongquan; Qin, Yingxue; Kong, Wendi; Zhao, Lingmin; Ma, Ying; Xu, Xiaojin; Lin, Mao; Zheng, Jiang; Yan, Qingpi

    2016-01-01

    The ability of bacteria to adhere to fish mucus can be affected by environmental conditions and is considered to be a key virulence factor of Vibrio alginolyticus. However, the molecular mechanism underlying this ability remains unclear. Our previous study showed that stress conditions such as exposure to Cu, Pb, Hg, and low pH are capable of reducing the adhesion ability of V. alginolyticus. Non-coding RNAs (ncRNAs) play a crucial role in the intricate regulation of bacterial gene expression, thereby affecting bacterial pathogenicity. Thus, we hypothesized that ncRNAs play a key role in the V. alginolyticus adhesion process. To validate this, we combined high-throughput sequencing with computational techniques to detect ncRNA dynamics in samples after stress treatments. The expression of randomly selected novel ncRNAs was confirmed by QPCR. Among the significantly altered ncRNAs, 30 were up-regulated and 2 down-regulated by all stress treatments. The QPCR results reinforced the reliability of the sequencing data. Target prediction and KEGG pathway analysis indicated that these ncRNAs are closely related to pathways associated with in vitro adhesion, and our results indicated that chemical stress-induced reductions in the adhesion ability of V. alginolyticus might be due to the perturbation of ncRNA expression. Our findings provide important information for further functional characterization of ncRNAs during the adhesion process of V. alginolyticus. PMID:27199948

  3. A multiscale technique for the validation of a numerical code for predicting the pressure field induced by a high-power spark

    NASA Astrophysics Data System (ADS)

    Villa, A.; Malgesini, R.; Barbieri, L.

    2011-04-01

    A more precise knowledge of the pressure field induced by a high-power spark is essential to estimate the mechanical damage that a lightning strike can induce near the impact point. In this work we propose a multiscale approach to validate a numerical magnetohydro-dynamic model that can predict the pressure field when a very high-power discharge is considered. Two simplified models for the arc resistance are considered and their respective results are compared. A brief analysis regarding the numerical issues involved in the solution of a very high temperature gas is included. The numerical code has been validated against the experimental data of a short-arc discharge using a current waveform prescribed by the aeronautical standards. Our study shows that a strong shock wave is generated in the first power peak and this travels away from the arc column maintaining a relatively high strength a few tens of centimetres away. The pressure in the arc region remains high for the whole discharge period.

  4. Improved atomic data for electron-transport predictions by the codes TIGER and TIGERP. I. Inner-shell ionization by electron collision

    SciTech Connect

    Peek, J.M.; Halbleib, J.A.

    1983-01-01

    The inner-shell ionization data for electron-target collisions now in use in the TIGER and TIGERP electron-transport codes are extracted and compared with other data for these processes. The TIGER cross sections for K-shell ionization by electron collisions are found to be seriously in error for large-Z targets and incident electron energies greater than 1 MeV. A series of TIGER and TIGERP runs were carried out with and without improved K-shell electron ionization cross section data replacing that now in use. The relative importance of electron-impact and photon ionization of the various subshells was also extracted from these runs. In general, photon ionization dominated in the examples studied so the sensitivity of many predicted properties to errors in the electron-impact subshell ionization data was not large. However, some differences were found and, as all possible applications were not covered in this study, it is recommended that these electron-impact data now in TIGER and TIGERP be replaced. Cross section data for the processes under study are reviewed and those that are most suitable for this application are identified. 19 references, 9 figures, 2 tables.

  5. Linking channel hydrology with riparian wetland accretion in tidal rivers

    NASA Astrophysics Data System (ADS)

    Ensign, Scott H.; Noe, Gregory B.; Hupp, Cliff R.

    2014-01-01

    hydrologic processes by which tide affects river channel and riparian morphology within the tidal freshwater zone are poorly understood yet are fundamental to predicting the fate of coastal rivers and wetlands as sea level rises. We investigated patterns of sediment accretion in riparian wetlands along the nontidal through oligohaline portion of two coastal plain rivers in Maryland, U.S., and how flow velocity, water level, and suspended sediment concentration (SSC) in the channel may have contributed to those patterns. Sediment accretion was measured over a 1 year period using artificial marker horizons, channel hydrology was measured over a 1 month period using acoustic Doppler current profilers, and SSC was predicted from acoustic backscatter. Riparian sediment accretion was lowest at the nontidal sites (mean and standard deviation = 8 ± 8 mm yr-1), highest at the upstream tidal freshwater forested wetlands (TFFW) (33 ± 28 mm yr-1), low at the midstream TFFW (12 ± 9 mm yr-1), and high at the oligohaline (fresh-to-brackish) marshes (19 ± 8 mm yr-1). Channel maximum flood and ebb velocity was twofold faster at the oligohaline than tidal freshwater zone on both tidal rivers, corresponding with the differences in in-channel SSC: The oligohaline zone's SSC was more than double the tidal freshwater zone's and was greater than historical SSC at the nontidal gages. The tidal wave characteristics differed between rivers, leading to significantly greater in-channel SSC during floodplain inundation in the weakly convergent than the strongly convergent tidal river. High sediment accretion at the upstream TFFW was likely due to high river discharge following a hurricane.

  6. Linking channel hydrology with riparian wetland accretion in tidal rivers

    USGS Publications Warehouse

    Ensign, Scott H.; Noe, Gregory B.; Hupp, Cliff R.

    2014-01-01

    The hydrologic processes by which tide affects river channel and riparian morphology within the tidal freshwater zone are poorly understood, yet are fundamental to predicting the fate of coastal rivers and wetlands as sea level rises. We investigated patterns of sediment accretion in riparian wetlands along the non-tidal through oligohaline portion of two coastal plain rivers in Maryland, U.S.A., and how flow velocity, water level, and suspended sediment concentration (SSC) in the channel may have contributed to those patterns. Sediment accretion was measured over a one year period using artificial marker horizons, channel hydrology was measured over a one month period using acoustic Doppler current profilers, and SSC was predicted from acoustic backscatter. Riparian sediment accretion was lowest at the non-tidal sites (mean and standard deviation = 8 ± 8 mm yr-1), highest at the upstream tidal freshwater forested wetlands (TFFW) (33 ± 28 mm yr-1), low at the midstream TFFW (12 ± 9 mm yr-1), and high at the oligohaline (fresh-to-brackish) marshes (19 ± 8 mm yr-1). Channel maximum flood and ebb velocity was 2-fold faster at the oligohaline than tidal freshwater zone on both tidal rivers, corresponding with the differences in in-channel SSC: the oligohaline zone's SSC was more than double the tidal freshwater zone's, and was greater than historical SSC at the non-tidal gages. The tidal wave characteristics differed between rivers, leading to significantly greater in-channel SSC during floodplain inundation in the weakly convergent than the strongly convergent tidal river. Overall sediment accretion was higher in the embayed river likely due to a single storm discharge and associated sedimentation.

  7. CONSTRAINTS ON THE VISCOSITY AND MAGNETIC FIELD IN HOT ACCRETION FLOWS AROUND BLACK HOLES

    SciTech Connect

    Liu, B. F.; Taam, Ronald E. E-mail: r-taam@northwestern.edu

    2013-07-15

    The magnitude of the viscosity and magnetic field parameters in hot accretion flows is investigated in low luminosity active galactic nuclei (LLAGNs). Theoretical studies show that a geometrically thin, optically thick disk is truncated at mass accretion rates less than a critical value by mass evaporated vertically from the disk to the corona, with the truncated region replaced by an advection dominated accretion flow (ADAF). The critical accretion rate for such a truncation is a function of the viscosity and magnetic field. Observations of X-ray photon indices and spectral fits of a number of LLAGNs published in the literature provide an estimate of the critical rate of mass accretion and the truncation radius, respectively. By comparing the observational results with theoretical predictions, the viscosity and magnetic field parameters in the hot accretion flow region are estimated. Specifically, the mass accretion rates inferred in different sources constrain the viscosity parameter, whereas the truncation radii of the disk, as inferred from spectral fits, further constrain the magnetic field parameter. It is found that the value of the viscosity parameter in the corona/ADAF ranges from 0.17 to 0.5, with values clustered about 0.2-0.3. Magnetic pressure is required by the relatively small truncation radii for some LLAGNs and is found to be as high as its equipartition value with the gas pressure. The inferred values of the viscosity parameter are in agreement with those obtained from the observations of non-stationary accretion in stellar mass black hole X-ray transients. This consistency provides support for the paradigm that a geometrically thin disk is truncated by means of a mass evaporation process from the disk to the corona at low mass accretion rates.

  8. A CORRELATION BETWEEN THE IONIZATION STATE OF THE INNER ACCRETION DISK AND THE EDDINGTON RATIO OF ACTIVE GALACTIC NUCLEI

    SciTech Connect

    Ballantyne, D. R.; McDuffie, J. R.; Rusin, J. S.

    2011-06-20

    X-ray reflection features observed from the innermost regions of accretion disks in active galactic nuclei (AGNs) allow important tests of accretion theory. In recent years, it has been possible to use the Fe K{alpha} line and reflection continuum to parameterize the ionization state of the irradiated inner accretion disk. Here, we collect 10 measurements of {xi}, the disk ionization parameter, from eight AGNs with strong evidence for reflection from the inner accretion disk and good black hole mass estimates. We find strong statistical evidence (98.56% confidence) for a nearly linear correlation between {xi} and the AGN Eddington ratio. Moreover, such a correlation is predicted by a simple application of {alpha}-disk accretion theory, albeit with a stronger dependence on the Eddington ratio. The theory shows that there will be intrinsic scatter to any correlation as a result of different black hole spins and radii of reflection. There are several possibilities to soften the predicted dependence on the Eddington ratio to allow a closer agreement with the observed correlation, but the current data do not allow for a unique explanation. The correlation can be used to estimate that MCG-6-30-15 should have a highly ionized inner accretion disk, which would imply a black hole spin of {approx}0.8. Additional measurements of {xi} from a larger sample of AGNs are needed to confirm the existence of this correlation, and will allow investigation of the accretion disk/corona interaction in the inner regions of accretion disks.

  9. Chondrule formation during planetesimal accretion

    NASA Astrophysics Data System (ADS)

    Asphaug, Erik; Jutzi, Martin; Movshovitz, Naor

    2011-08-01

    We explore the idea that most chondrules formed as a consequence of inefficient pairwise accretion, when molten or partly molten planetesimals ~ 30-100 km diameter, similar in size, collided at velocities comparable to their two-body escape velocity ~ 100 m/s. Although too slow to produce shocks or disrupt targets, these collisions were messy, especially after ~ 1 Ma of dynamical excitation. In SPH simulations we find that the innermost portion of the projectile decelerates into the target, while the rest continues downrange in massive sheets. Unloading from pre-collision hydrostatic pressure P0 ~ 1-100 bar into the nebula, the melt achieves equilibrium with the surface energy of chondrule-sized droplets. Cooling is regulated post collision by the expansion of the optically thick sheets. on a timescale of hours-days. Much of the sheet rains back down onto the target to be reprocessed; the rest is dispersed.

  10. NSCool: Neutron star cooling code

    NASA Astrophysics Data System (ADS)

    Page, Dany

    2016-09-01

    NSCool is a 1D (i.e., spherically symmetric) neutron star cooling code written in Fortran 77. The package also contains a series of EOSs (equation of state) to build stars, a series of pre-built stars, and a TOV (Tolman- Oppenheimer-Volkoff) integrator to build stars from an EOS. It can also handle “strange stars” that have a huge density discontinuity between the quark matter and the covering thin baryonic crust. NSCool solves the heat transport and energy balance equations in whole GR, resulting in a time sequence of temperature profiles (and, in particular, a Teff - age curve). Several heating processes are included, and more can easily be incorporated. In particular it can evolve a star undergoing accretion with the resulting deep crustal heating, under a steady or time-variable accretion rate. NSCool is robust, very fast, and highly modular, making it easy to add new subroutines for new processes.

  11. Legacy Code Modernization

    NASA Technical Reports Server (NTRS)

    Hribar, Michelle R.; Frumkin, Michael; Jin, Haoqiang; Waheed, Abdul; Yan, Jerry; Saini, Subhash (Technical Monitor)

    1998-01-01

    Over the past decade, high performance computing has evolved rapidly; systems based on commodity microprocessors have been introduced in quick succession from at least seven vendors/families. Porting codes to every new architecture is a difficult problem; in particular, here at NASA, there are many large CFD applications that are very costly to port to new machines by hand. The LCM ("Legacy Code Modernization") Project is the development of an integrated parallelization environment (IPE) which performs the automated mapping of legacy CFD (Fortran) applications to state-of-the-art high performance computers. While most projects to port codes focus on the parallelization of the code, we consider porting to be an iterative process consisting of several steps: 1) code cleanup, 2) serial optimization,3) parallelization, 4) performance monitoring and visualization, 5) intelligent tools for automated tuning using performance prediction and 6) machine specific optimization. The approach for building this parallelization environment is to build the components for each of the steps simultaneously and then integrate them together. The demonstration will exhibit our latest research in building this environment: 1. Parallelizing tools and compiler evaluation. 2. Code cleanup and serial optimization using automated scripts 3. Development of a code generator for performance prediction 4. Automated partitioning 5. Automated insertion of directives. These demonstrations will exhibit the effectiveness of an automated approach for all the steps involved with porting and tuning a legacy code application for a new architecture.

  12. Ethical coding.

    PubMed

    Resnik, Barry I

    2009-01-01

    It is ethical, legal, and proper for a dermatologist to maximize income through proper coding of patient encounters and procedures. The overzealous physician can misinterpret reimbursement requirements or receive bad advice from other physicians and cross the line from aggressive coding to coding fraud. Several of the more common problem areas are discussed.

  13. MAGNETOSPHERIC ACCRETION IN CLOSE PRE-MAIN-SEQUENCE BINARIES

    SciTech Connect

    Ardila, David R.; Jonhs-Krull, Christopher; Herczeg, Gregory J.; Mathieu, Robert D.; Quijano-Vodniza, Alberto

    2015-10-01

    The transfer of matter between a circumbinary disk and a young binary system remains poorly understood, obscuring the interpretation of accretion indicators. To explore the behavior of these indicators in multiple systems, we have performed the first systematic time-domain study of young binaries in the ultraviolet. We obtained far- and near-ultraviolet HST/COS spectra of the young spectroscopic binaries DQ Tau and UZ Tau E. Here we focus on the continuum from 2800 to 3200 Å and on the C iv doublet (λλ1548.19, 1550.77 Å) as accretion diagnostics. Each system was observed over three or four consecutive binary orbits, at phases ∼0, 0.2, 0.5, and 0.7. Those observations are complemented by ground-based U-band measurements. Contrary to model predictions, we do not detect any clear correlation between accretion luminosity and phase. Further, we do not detect any correlation between C iv flux and phase. For both stars the appearance of the C iv line is similar to that of single Classical T Tauri Stars (CTTSs), despite the lack of stable long-lived circumstellar disks. However, unlike the case in single CTTSs, the narrow and broad components of the C iv lines are uncorrelated, and we argue that the narrow component is powered by processes other than accretion, such as flares in the stellar magnetospheres and/or enhanced activity in the upper atmosphere. We find that both stars contribute equally to the narrow component C iv flux in DQ Tau, but the primary dominates the narrow component C iv emission in UZ Tau E. The C iv broad component flux is correlated with other accretion indicators, suggesting an accretion origin. However, the line is blueshifted, which is inconsistent with its origin in an infall flow close to the star. It is possible that the complicated geometry of the region, as well as turbulence in the shock region, are responsible for the blueshifted line profiles.

  14. Effects of ice accretions on aircraft aerodynamics

    NASA Astrophysics Data System (ADS)

    Lynch, Frank T.; Khodadoust, Abdollah

    2001-11-01

    This article is a systematic and comprehensive review, correlation, and assessment of test results available in the public domain which address the aerodynamic performance and control degradations caused by various types of ice accretions on the lifting surfaces of fixed wing aircraft. To help put the various test results in perspective, overviews are provided first of the important factors and limitations involved in computational and experimental icing simulation techniques, as well as key aerodynamic testing simulation variables and governing flow physics issues. Following these are the actual reviews, assessments, and correlations of a large number of experimental measurements of various forms of mostly simulated in-flight and ground ice accretions, augmented where appropriate by similar measurements for other analogous forms of surface contamination and/or disruptions. In-flight icing categories reviewed include the initial and inter-cycle ice accretions inherent in the use of de-icing systems which are of particular concern because of widespread misconceptions about the thickness of such accretions which can be allowed before any serious consequences occur, and the runback/ridge ice accretions typically associated with larger-than-normal water droplet encounters which are of major concern because of the possible potential for catastrophic reductions in aerodynamic effectiveness. The other in-flight ice accretion category considered includes the more familiar large rime and glaze ice accretions, including ice shapes with rather grotesque features, where the concern is that, in spite of all the research conducted to date, the upper limit of penalties possible has probably not been defined. Lastly, the effects of various possible ground frost/ice accretions are considered. The concern with some of these is that for some types of configurations, all of the normally available operating margins to stall at takeoff may be erased if these accretions are not

  15. Accretion Rate: An Axis Of Agn Unification

    NASA Astrophysics Data System (ADS)

    Trump, Jonathan R.; Impey, C. D.; Kelly, B. C.

    2011-01-01

    We show how accretion rate governs the physical properties of broad-line, narrow-line, and lineless active galactic nuclei (AGNs). We avoid the systematic errors plaguing previous studies of AGN accretion rate by using accurate accretion luminosities from well-sampled multiwavelength SEDs from the Cosmic Evolution Survey (COSMOS), and accurate black hole masses derived from virial scaling relations (for broad-line AGNs) or host-AGN relations (for narrow-line and lineless AGNs). In general, broad emission lines are present only at the highest accretion rates (L/L_Edd>0.01), and these rapidly accreting AGNs are observed as broad-line AGNs or possibly as obscured narrow-line AGNs. Narrow-line and lineless AGNs at lower specific accretion rates (L/L_Edd<0.01) are unobscured and yet lack a broad line region. The disappearance of the broad emission lines is caused by an expanding radiatively inefficient accretion flow (RIAF) at the inner radius of the accretion disk. The presence of the RIAF also drives L/L_Edd<0.01 narrow-line and lineless AGNs to be 10-100 times more radio-luminous than broad-line AGNs, since the unbound nature of the RIAF means it is easier to form a radio outflow. The IR torus signature also tends to become weaker or disappear from L/L_Edd<0.01 AGNs, although there may be additional mid-IR synchrotron emission associated with the RIAF. Together these results suggest that specific accretion rate is an important physical "axis" of AGN unification, described by a simple model.

  16. Preliminary Assessment of Turbomachinery Codes

    NASA Technical Reports Server (NTRS)

    Mazumder, Quamrul H.

    2007-01-01

    This report assesses different CFD codes developed and currently being used at Glenn Research Center to predict turbomachinery fluid flow and heat transfer behavior. This report will consider the following codes: APNASA, TURBO, GlennHT, H3D, and SWIFT. Each code will be described separately in the following section with their current modeling capabilities, level of validation, pre/post processing, and future development and validation requirements. This report addresses only previously published and validations of the codes. However, the codes have been further developed to extend the capabilities of the codes.

  17. Diskoseismology: Probing relativistic accretion disks

    NASA Astrophysics Data System (ADS)

    Nowak, Michael Allen

    1992-08-01

    Helioseismology has provided a wealth of information about the structure of the solar atmosphere. Little is known, however, about the structure of accretion disks that are thought to exist around black holes and neutron stars. In this thesis we present calculations of modes that are trapped in thin Keplerian accretion disks. We hope to use observations of thes modes to elucidate the structure of the inner relativistic regions of accretion disks. Our calculations assume that the thin disk is terminated by an innermost stable orbit, as would occur around a slowly rotating black hole or weakly magnetized compact neutron star. The dominant relativistic effects, which allow modes to be trapped within the inner region of the disk, are approximated via a modified Newtonian potential. Using the Lagrangian formulation of Friedman and Schutz, we develop a general formalism for investigating the adiabatic oscillations of arbitrary unperturbed disk models. First we consider the special case of acoustic waves in disks with isothermal atmospheres. Next we describe the Lagrangian perturbation vectors in terms of the derivatives of a scalar potential, as has been done by Ipser and Lindblom. Using this potential, we derive a single partial differential equation governing the oscillations of a disk. The eigenfunctions and eigenfrequencies of a variety of disk models are found to fall into two main classes which are analogous to the p-modes and g-modes in the sun. Specifically we use the potential formalism to compute the g-modes for disks with isothermal atmospheres. Physical arguments show that both the p-modes and g-modes belong to the same family of modes as the p-modes and g-modes in the sun, just viewed in a different parameter regime. With the aid of the Lagrangian formalism we consider possible growth or damping mechanisms and compute the (assumed) relatively small rates of growth or damping of the modes. Specifically, we consider gravitational radiation reaction and

  18. Galaxies in Clusters : Gas Stripping and Accretion

    NASA Astrophysics Data System (ADS)

    O'Dea, Chris; Balsara, Dinshaw; Livio, Mario

    1994-05-01

    We study the process of a galaxy moving through the intercluster gas in a cluster of galaxies, using a high quality hydrocode run at high resolutions. We find that ram pressure stripping occurs in the form of individual events that are separated by about ten million years. In addition we find that the galaxy accretes gas from the downstream side into the core. This accretion process exhibits a radial "pumping" mode, similar to the one found previously in simulations of wind accretion onto compact objects. Some implications of our results for the understanding of a few recent observations are discussed.

  19. Cyclotron Lines in Accreting Neutron Star Spectra

    NASA Astrophysics Data System (ADS)

    Wilms, Jörn; Schönherr, Gabriele; Schmid, Julia; Dauser, Thomas; Kreykenbohm, Ingo

    2009-05-01

    Cyclotron lines are formed through transitions of electrons between discrete Landau levels in the accretion columns of accreting neutron stars with strong (1012 G) magnetic fields. We summarize recent results on the formation of the spectral continuum of such systems, describe recent advances in the modeling of the lines based on a modification of the commonly used Monte Carlo approach, and discuss new results on the dependence of the measured cyclotron line energy from the luminosity of transient neutron star systems. Finally, we show that Simbol-X will be ideally suited to build and improve the observational database of accreting and strongly magnetized neutron stars.

  20. Accretion of the Moon from non-canonical discs.

    PubMed

    Salmon, J; Canup, R M

    2014-09-13

    Impacts that leave the Earth-Moon system with a large excess in angular momentum have recently been advocated as a means of generating a protolunar disc with a composition that is nearly identical to that of the Earth's mantle. We here investigate the accretion of the Moon from discs generated by such 'non-canonical' impacts, which are typically more compact than discs produced by canonical impacts and have a higher fraction of their mass initially located inside the Roche limit. Our model predicts a similar overall accretional history for both canonical and non-canonical discs, with the Moon forming in three consecutive steps over hundreds of years. However, we find that, to yield a lunar-mass Moon, the more compact non-canonical discs must initially be more massive than implied by prior estimates, and only a few of the discs produced by impact simulations to date appear to meet this condition. Non-canonical impacts require that capture of the Moon into the evection resonance with the Sun reduced the Earth-Moon angular momentum by a factor of 2 or more. We find that the Moon's semi-major axis at the end of its accretion is approximately 7R⊕, which is comparable to the location of the evection resonance for a post-impact Earth with a 2.5 h rotation period in the absence of a disc. Thus, the dynamics of the Moon's assembly may directly affect its ability to be captured into the resonance.

  1. Neutron and antineutron production in accretion onto compact objects

    NASA Technical Reports Server (NTRS)

    Dermer, Charles D.; Ramaty, Reuven

    1986-01-01

    Nuclear reactions in the hot accretion plasma surrounding a collapsed star are a source of neutrons, primarily through spallation and pion-producing reactions, and antineutrons, principally through the reaction p+p yields p+p+n+anti-n. We calculate spectra of neutrons and antineutrons produced by a variety of nonthermal energetic particle distributions in which the target particles are either at rest or in motion. If only neutral particles are free to escape the interaction site, a component of the proton and antiproton fluxes in the cosmic radiation results from the neutrons and antineutrons which leave the accretion plasma and subsequently decay in the interstellar medium. This additional antiproton component could account for the enhanced flux of antiprotons in the cosmic radiation, compared to values expected from the standard leaky-box model of cosmic-ray propagation and confinement. Moreover, the low-energy antiproton flux measured by Buffington et al. (1981) could result from target-particle motion in the accretion plasma. This model for the origin of antiprotons predicts a narrow 2.223 MeV line which could be observable.

  2. Super-spinning compact objects generated by thick accretion disks

    SciTech Connect

    Li, Zilong; Bambi, Cosimo E-mail: bambi@fudan.edu.cn

    2013-03-01

    If astrophysical black hole candidates are the Kerr black holes predicted by General Relativity, the value of their spin parameter must be subject to the theoretical bound |a{sub *}| ≤ 1. In this work, we consider the possibility that these objects are either non-Kerr black holes in an alternative theory of gravity or exotic compact objects in General Relativity. We study the accretion process when their accretion disk is geometrically thick with a simple version of the Polish doughnut model. The picture of the accretion process may be qualitatively different from the one around a Kerr black hole. The inner edge of the disk ma