A role of high impact weather events in waterborne disease outbreaks in Canada, 1975 - 2001.

PubMed

Thomas, Kate M; Charron, Dominique F; Waltner-Toews, David; Schuster, Corinne; Maarouf, Abdel R; Holt, John D

2006-06-01

Recent outbreaks of Escherichia coli O157:H7, Campylobacter, and Cryptosporidium have heightened awareness of risks associated with contaminated water supply. The objectives of this research were to describe the incidence and distribution of waterborne disease outbreaks in Canada in relation to preceding weather conditions and to test the association between high impact weather events and waterborne disease outbreaks. We examined extreme rainfall and spring snowmelt in association with 92 Canadian waterborne disease outbreaks between 1975 and 2001, using case-crossover methodology. Explanatory variables including accumulated rainfall, air temperature, and peak stream flow were used to determine the relationship between high impact weather events and the occurrence of waterborne disease outbreaks. Total maximum degree-days above 0 degrees C and accumulated rainfall percentile were associated with outbreak risk. For each degree-day above 0 degrees C the relative odds of an outbreak increased by a factor of 1.007 (95% confidence interval [CI] = 1.002 - 1.012). Accumulated rainfall percentile was dichotomized at the 93rd percentile. For rainfall events greater than the 93rd percentile the relative odds of an outbreak increased by a factor of 2.283 (95% [CI] = 1.216 - 4.285). These results suggest that warmer temperatures and extreme rainfall are contributing factors to waterborne disease outbreaks in Canada. This could have implications for water management and public health initiatives.

Development of interface-dominant bulk Cu/V nanolamellar composites by cross accumulative roll bonding

PubMed Central

Zeng, L. F.; Gao, R.; Xie, Z. M.; Miao, S.; Fang, Q. F.; Wang, X. P.; Zhang, T.; Liu, C. S.

2017-01-01

Traditional nanostructured metals are inherently comprised of a high density of high-energy interfaces that make this class of materials not stable in extreme conditions. Therefore, high performance bulk nanostructured metals containing stable interfaces are highly desirable for extreme environments applications. Here, we reported an attractive bulk Cu/V nanolamellar composite that was successfully developed by integrating interface engineering and severe plastic deformation techniques. The layered morphology and ordered Cu/V interfaces remained stable with respect to continued rolling (total strain exceeding 12). Most importantly, for layer thickness of 25 nm, this bulk Cu/V nanocomposite simultaneously achieves high strength (hardness of 3.68 GPa) and outstanding thermal stability (up to 700 °C), which are quite difficult to realize simultaneously in traditional nanostructured materials. Such extraordinary property in our Cu/V nanocomposite is achieved via an extreme rolling process that creates extremely high density of stable Cu/V heterophase interfaces and low density of unstable grain boundaries. In addition, high temperature annealing result illustrates that Rayleigh instability is the dominant mechanism driving the onset of thermal instability after exposure to 800 °C. PMID:28094346

An Extremely Halophilic Proteobacterium Combines a Highly Acidic Proteome with a Low Cytoplasmic Potassium Content*

PubMed Central

Deole, Ratnakar; Challacombe, Jean; Raiford, Douglas W.; Hoff, Wouter D.

2013-01-01

Halophilic archaea accumulate molar concentrations of KCl in their cytoplasm as an osmoprotectant and have evolved highly acidic proteomes that function only at high salinity. We examined osmoprotection in the photosynthetic Proteobacteria Halorhodospira halophila and Halorhodospira halochloris. Genome sequencing and isoelectric focusing gel electrophoresis showed that the proteome of H. halophila is acidic. In line with this finding, H. halophila accumulated molar concentrations of KCl when grown in high salt medium as detected by x-ray microanalysis and plasma emission spectrometry. This result extends the taxonomic range of organisms using KCl as a main osmoprotectant to the Proteobacteria. The closely related organism H. halochloris does not exhibit an acidic proteome, matching its inability to accumulate K+. This observation indicates recent evolutionary changes in the osmoprotection strategy of these organisms. Upon growth of H. halophila in low salt medium, its cytoplasmic K+ content matches that of Escherichia coli, revealing an acidic proteome that can function in the absence of high cytoplasmic salt concentrations. These findings necessitate a reassessment of two central aspects of theories for understanding extreme halophiles. First, we conclude that proteome acidity is not driven by stabilizing interactions between K+ ions and acidic side chains but by the need for maintaining sufficient solvation and hydration of the protein surface at high salinity through strongly hydrated carboxylates. Second, we propose that obligate protein halophilicity is a non-adaptive property resulting from genetic drift in which constructive neutral evolution progressively incorporates weakly stabilizing K+-binding sites on an increasingly acidic protein surface. PMID:23144460

Violent aggression predicted by multiple pre-adult environmental hits.

PubMed

Mitjans, Marina; Seidel, Jan; Begemann, Martin; Bockhop, Fabian; Moya-Higueras, Jorge; Bansal, Vikas; Wesolowski, Janina; Seelbach, Anna; Ibáñez, Manuel Ignacio; Kovacevic, Fatka; Duvar, Oguzhan; Fañanás, Lourdes; Wolf, Hannah-Ulrike; Ortet, Generós; Zwanzger, Peter; Klein, Verena; Lange, Ina; Tänzer, Andreas; Dudeck, Manuela; Penke, Lars; van Elst, Ludger Tebartz; Bittner, Robert A; Schmidmeier, Richard; Freese, Roland; Müller-Isberner, Rüdiger; Wiltfang, Jens; Bliesener, Thomas; Bonn, Stefan; Poustka, Luise; Müller, Jürgen L; Arias, Bárbara; Ehrenreich, Hannelore

2018-05-24

Early exposure to negative environmental impact shapes individual behavior and potentially contributes to any mental disease. We reported previously that accumulated environmental risk markedly decreases age at schizophrenia onset. Follow-up of matched extreme group individuals (≤1 vs. ≥3 risks) unexpectedly revealed that high-risk subjects had >5 times greater probability of forensic hospitalization. In line with longstanding sociological theories, we hypothesized that risk accumulation before adulthood induces violent aggression and criminal conduct, independent of mental illness. We determined in 6 independent cohorts (4 schizophrenia and 2 general population samples) pre-adult risk exposure, comprising urbanicity, migration, physical and sexual abuse as primary, and cannabis or alcohol as secondary hits. All single hits by themselves were marginally associated with higher violent aggression. Most strikingly, however, their accumulation strongly predicted violent aggression (odds ratio 10.5). An epigenome-wide association scan to detect differential methylation of blood-derived DNA of selected extreme group individuals yielded overall negative results. Conversely, determination in peripheral blood mononuclear cells of histone-deacetylase1 mRNA as 'umbrella mediator' of epigenetic processes revealed an increase in the high-risk group, suggesting lasting epigenetic alterations. Together, we provide sound evidence of a disease-independent unfortunate relationship between well-defined pre-adult environmental hits and violent aggression, calling for more efficient prevention.

Biofiltration of high concentration of H2S in waste air under extreme acidic conditions.

PubMed

Ben Jaber, Mouna; Couvert, Annabelle; Amrane, Abdeltif; Rouxel, Franck; Le Cloirec, Pierre; Dumont, Eric

2016-01-25

Removal of high concentrations of hydrogen sulfide using a biofilter packed with expanded schist under extreme acidic conditions was performed. The impact of various parameters such as H2S concentration, pH changes and sulfate accumulation on the performances of the process was evaluated. Elimination efficiency decreased when the pH was lower than 1 and the sulfate accumulation was more than 12 mg S-SO4(2-)/g dry media, due to a continuous overloading by high H2S concentrations. The influence of these parameters on the degradation of H2S was clearly underlined, showing the need for their control, performed through an increase of watering flow rate. A maximum elimination capacity (ECmax) of 24.7 g m(-3) h(-1) was recorded. As a result, expanded schist represents an interesting packing material to remove high H2S concentration up to 360 ppmv with low pressure drops. In addition, experimental data were fitted using both Michaelis-Menten and Haldane models, showing that the Haldane model described more accurately experimental data since the inhibitory effect of H2S was taken into account. Copyright © 2015 Elsevier B.V. All rights reserved.

Silicon-Carbide Power MOSFET Performance in High Efficiency Boost Power Processing Unit for Extreme Environments

NASA Technical Reports Server (NTRS)

Ikpe, Stanley A.; Lauenstein, Jean-Marie; Carr, Gregory A.; Hunter, Don; Ludwig, Lawrence L.; Wood, William; Del Castillo, Linda Y.; Fitzpatrick, Fred; Chen, Yuan

2016-01-01

Silicon-Carbide device technology has generated much interest in recent years. With superior thermal performance, power ratings and potential switching frequencies over its Silicon counterpart, Silicon-Carbide offers a greater possibility for high powered switching applications in extreme environment. In particular, Silicon-Carbide Metal-Oxide- Semiconductor Field-Effect Transistors' (MOSFETs) maturing process technology has produced a plethora of commercially available power dense, low on-state resistance devices capable of switching at high frequencies. A novel hard-switched power processing unit (PPU) is implemented utilizing Silicon-Carbide power devices. Accelerated life data is captured and assessed in conjunction with a damage accumulation model of gate oxide and drain-source junction lifetime to evaluate potential system performance at high temperature environments.

Boron stress response and accumulation potential of the extremely tolerant species Puccinellia frigida.

PubMed

Rámila, Consuelo D P; Contreras, Samuel A; Di Domenico, Camila; Molina-Montenegro, Marco A; Vega, Andrea; Handford, Michael; Bonilla, Carlos A; Pizarro, Gonzalo E

2016-11-05

Phytoremediation is a promising technology to tackle boron toxicity, which restricts agricultural activities in many arid and semi-arid areas. Puccinellia frigida is a perennial grass that was reported to hyperaccumulate boron in extremely boron-contaminated sites. To further investigate its potential for phytoremediation, we determined its response to boron stress under controlled conditions (hydroponic culture). Also, as a first step towards understanding the mechanisms underlying its extreme tolerance, we evaluated the presence and expression of genes related with boron tolerance. We found that P. frigida grew normally even at highly toxic boron concentrations in the medium (500mg/L), and within its tissues (>5000mg/kg DW). We postulate that the strategies conferring this extreme tolerance involve both restricting boron accumulation and an internal tolerance mechanism; this is consistent with the identification of putative genes involved in both mechanisms, including the expression of a possible boron efflux transporter. We also found that P. frigida hyperaccumulated boron over a wide range of boron concentrations. We propose that P. frigida could be used for boron phytoremediation strategies in places with different soil characteristics and boron concentrations. Further studies should pave the way for the development of clean and low-cost solutions to boron toxicity problems. Copyright © 2016 Elsevier B.V. All rights reserved.

Depositional environment and organic matter accumulation of Upper Ordovician–Lower Silurian marine shale in the Upper Yangtze Platform, South China

USGS Publications Warehouse

Li, Yangfang; Zhang, Tongwei; Ellis, Geoffrey S.; Shao, Deyong

2017-01-01

The main controlling factors of organic matter accumulation in the Upper Ordovician Wufeng–Lower Silurian Longmaxi Formations are complex and remain highly controversial. This study investigates the vertical variation of total organic carbon (TOC) content as well as major and trace element concentrations of four Ordovician–Silurian transition sections from the Upper Yangtze Platform of South China to reconstruct the paleoenvironment of these deposits and to improve our understanding of those factors that have influenced organic matter accumulation in these deposits.The residual TOC content of the Wufeng Formation averages 3.2% and ranges from 0.12 to 6.0%. The overlying lower Longmaxi Formation displays higher TOC content (avg. 4.4%), followed upsection by consistent and lower values that average 1.6% in the upper Longmaxi Formation. The concentration and covariation of redox-sensitive trace elements (Mo, U and V) suggest that organic-rich intervals of the Wufeng Formation accumulated under predominantly anoxic conditions. Organic-rich horizons of the lower Longmaxi Formation were deposited under strongly anoxic to euxinic conditions, whereas organic-poor intervals of the upper Longmaxi Formation accumulated under suboxic conditions. Positive correlations between redox proxies and TOC contents suggest that organic matter accumulation was predominantly controlled by preservation. Barium excess (Baxs) values indicate high paleoproductivity throughout the entire depositional sequence, with an increase in the lower Longmaxi Formation. Increased productivity may have been induced by enhanced P recycling, as evidenced by elevated Corg/Ptot ratios. Mo–U covariation and Mo/TOC values reveal that the Wufeng Formation was deposited under extremely restricted conditions, whereas the Longmaxi Formation accumulated under moderately restricted conditions. During the Late Ordovician, the extremely restricted nature of ocean circulation on the Upper Yangtze Platform in tandem with enhanced stratification of the water column promoted anoxic conditions favorable for the preservation of organic matter. During Early Silurian time, organic matter accumulation was principally controlled by changes in sea level, which affected terrigenous flux, redox conditions, and the degree of nutrition recycling.

Accumulation of uranium by immobilized persimmon tannin

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sakaguchi, Takashi; Nakajima, Akira

1994-01-01

We have discovered that the extracted juice of unripe astringent persimmon fruit, designated as kakishibu or shibuol, has an extremely high affinity for uranium. To develop efficient adsorbents for uranium, we tried to immobilize kakishibu (persimmon tannin) with various aldehydes and mineral acids. Persimmon tannin immobilized with glutaraldehyde can accumulate 1.71 g (14 mEq U) of uranium per gram of the adsorbent. The uranium accumulating capacity of this adsorbent is several times greater than that of commercially available chelating resins (2-3 mEq/g). Immobilized persimmon tannin has the most favorable features for uranium recovery; high selective adsorption ability, rapid adsorption rate,more » and applicability in both column and batch systems. The uranium retained on immobilized persimmon tannin can be quantitatively and easily eluted with a very dilute acid, and the adsorbent can thus be easily recycled in the adsorption-desorption process. Immobilized persimmon tannin also has a high affinity for thorium. 23 refs., 13 figs., 7 tabs.« less

Extreme risk assessment based on normalized historic loss data

NASA Astrophysics Data System (ADS)

Eichner, Jan

2017-04-01

Natural hazard risk assessment and risk management focuses on the expected loss magnitudes of rare and extreme events. Such large-scale loss events typically comprise all aspects of compound events and accumulate losses from multiple sectors (including knock-on effects). Utilizing Munich Re's NatCatSERVICE direct economic loss data, we beriefly recap a novel methodology of peril-specific loss data normalization which improves the stationarity properties of highly non-stationary historic loss data (due to socio-economic growth of assets prone to destructive forces), and perform extreme value analysis (peaks-over-threshold method) to come up with return level estimates of e.g. 100-yr loss event scenarios for various types of perils, globally or per continent, and discuss uncertainty in the results.

Root and shoot transcriptome analysis of two ecotypes of Noccaea caerulescens uncovers the role of NcNramp1 in Cd hyperaccumulation

USDA-ARS?s Scientific Manuscript database

The Zn/Cd hyperaccumulator, Noccaea caerulescens, has been studied extensively for its ability to accumulate Zn and Cd in its leaves to extremely high levels. Previous studies have indicated that the Zn and Cd hyperaccumulation trait exhibited by this species involves different transport and toleran...

A probabilistic view of chaparral and forest fire regimes in southern California and northern Baja California

Treesearch

Richard A. Minnich; Ernesto Franco-Vizcaíno

2009-01-01

Fire suppression in industrialized countries encourages massive smoke emissions from high-intensity fires as a result of two inextricably related processes under current suppression policies: the nonrandom occurrence of vegetation fires in extreme weather states and the anomalous accumulation of spatially homogenous fuels. We propose as an organizing idea that the...

Growth, nitrogen accumulation and nitrogen transfer by legume species established on mine spoils

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jefferies, R.A.; Bradshaw, A.D.; Putwain, P.D.

1981-12-01

Nitrogen deficiency is an important factor limiting plant growth on many types of mine and mineral spoils. One method of overcoming this problem is to use legume species which are able to accumulate nitrogen in such spoils. The growth, nitrogen accumulation and nitrogen transfer to a companion species was compared in contrasting legume species established on colliery spoil and on sand waste from the extraction of china clay. Legumes can be effective means of accumulating nitrogen in such spoils with rates as high as 295 kg N ha/sup -1/ yr/sup -1/ being measured for Lupinus perennis sown on sand waste.more » Nitrogen transfer from legumes to a companion grass was also apparent. Trifolium repens sown on colliery spoil increased the nitrogen content of the companion grass by 76 kg ha/sup -1/ within 2 yr of sowing. It is concluded that a wider range of legume species than conventionally used is available, offering greater tolerance of the extreme conditions of mine spoils combined with high rates of nitrogen accumulation. It is necessary to develop reclamation strategies which incorporate such species.« less

Electrostatic Charging of the Pathfinder Rover

NASA Technical Reports Server (NTRS)

Siebert, Mark W.; Kolecki, Joseph C.

1996-01-01

The Mars Pathfinder mission will send a lander and a rover to the martian surface. Because of the extremely dry conditions on Mars, electrostatic charging of the rover is expected to occur as it moves about. Charge accumulation may result in high electrical potentials and discharge through the martian atmosphere. Such discharge could interfere with the operation of electrical elements on the rover. A strategy was sought to mitigate this charge accumulation as a precautionary measure. Ground tests were performed to demonstrate charging in laboratory conditions simulating the surface conditions expected at Mars. Tests showed that a rover wheel, driven at typical rover speeds, will accumulate electrical charge and develop significant electrical potentials (average observed, 110 volts). Measurements were made of wheel electrical potential, and wheel capacitance. From these quantities, the amount of absolute charge was estimated. An engineering solution was developed and recommended to mitigate charge accumulation. That solution has been implemented on the actual rover.

Metal(loid) accumulation in aquatic plants of a mining area: Potential for water quality biomonitoring and biogeochemical prospecting.

PubMed

Favas, Paulo J C; Pratas, João; Rodrigues, Nelson; D'Souza, Rohan; Varun, Mayank; Paul, Manoj S

2018-03-01

Aquatic bryophytes can accumulate extremely high levels of chemical elements because of their unique morphology and physiology which is markedly different from vascular plants. Four aquatic mosses-Fontinalis squamosa, Brachythecium rivulare, Platyhypnidium riparioides, Thamnobryum alopecurum-and a freshwater red alga Lemanea fluviatilis along with water samples from the streams of Góis mine region in Central Portugal were analyzed for 46 elements. Despite being below detection levels in the water samples, the elements Zr, V, Cr, Mo, Ru, Os, Rh, Ir, Pt, Ag, Ge and Bi were obtained in the plant samples. The moss T. alopecurum had the highest mean concentrations of 19 elements followed by B. rivulare (15 elements). Maximum accumulation of Rb, Ta and Au, however, was seen in the alga L. fluviatilis. Bioconcentration factors > 10 6 were obtained for a few metals. The investigation confirms that aquatic bryophytes can be suitable for water quality biomonitoring and biogeochemical prospecting in fresh water bodies owing to their high accumulative capacity of multi-elements from their aquatic ambient. Copyright © 2017 Elsevier Ltd. All rights reserved.

Extreme heat reduces and shifts United States premium wine production in the 21st century

PubMed Central

White, M. A.; Diffenbaugh, N. S.; Jones, G. V.; Pal, J. S.; Giorgi, F.

2006-01-01

Premium wine production is limited to regions climatically conducive to growing grapes with balanced composition and varietal typicity. Three central climatic conditions are required: (i) adequate heat accumulation; (ii) low risk of severe frost damage; and (iii) the absence of extreme heat. Although wine production is possible in an extensive climatic range, the highest-quality wines require a delicate balance among these three conditions. Although historical and projected average temperature changes are known to influence global wine quality, the potential future response of wine-producing regions to spatially heterogeneous changes in extreme events is largely unknown. Here, by using a high-resolution regional climate model forced by the Intergovernmental Panel on Climate Change Special Report on Emission Scenarios A2 greenhouse gas emission scenario, we estimate that potential premium winegrape production area in the conterminous United States could decline by up to 81% by the late 21st century. While increases in heat accumulation will shift wine production to warmer climate varieties and/or lower-quality wines, and frost constraints will be reduced, increases in the frequency of extreme hot days (>35°C) in the growing season are projected to eliminate winegrape production in many areas of the United States. Furthermore, grape and wine production will likely be restricted to a narrow West Coast region and the Northwest and Northeast, areas currently facing challenges related to excess moisture. Our results not only imply large changes for the premium wine industry, but also highlight the importance of incorporating fine-scale processes and extreme events in climate-change impact studies. PMID:16840557

Polyimide matrix resins for up to 700 deg F service

NASA Technical Reports Server (NTRS)

Jones, R. J.; Chang, G. E.; Powell, S. H.; Green, H. E.

1985-01-01

TRW is in the process of data accumulation that strongly indicates that incorporation of the perfluorsisopropylidene linkage in molecular structures other than those employed in DU Pont's NR-150B polyimides likewise yield polymers demonstrating extremely high thermo-oxidative stability. Polyimide synthetic and characterization studies conducted to date on new polymers incorporating the perfluoroisopropylidene linkage are presented and discussed.

The Evaluation on the Cadmium Net Concentration for Soil Ecosystems.

PubMed

Yao, Yu; Wang, Pei-Fang; Wang, Chao; Hou, Jun; Miao, Ling-Zhan

2017-03-12

Yixing, known as the "City of Ceramics", is facing a new dilemma: a raw material crisis. Cadmium (Cd) exists in extremely high concentrations in soil due to the considerable input of industrial wastewater into the soil ecosystem. The in situ technique of diffusive gradients in thin film (DGT), the ex situ static equilibrium approach (HAc, EDTA and CaCl2), and the dissolved concentration in soil solution, as well as microwave digestion, were applied to predict the Cd bioavailability of soil, aiming to provide a robust and accurate method for Cd bioavailability evaluation in Yixing. Moreover, the typical local cash crops-paddy and zizania aquatica-were selected for Cd accumulation, aiming to select the ideal plants with tolerance to the soil Cd contamination. The results indicated that the biomasses of the two applied plants were sufficiently sensitive to reflect the stark regional differences of different sampling sites. The zizania aquatica could effectively reduce the total Cd concentration, as indicated by the high accumulation coefficients. However, the fact that the zizania aquatica has extremely high transfer coefficients, and its stem, as the edible part, might accumulate large amounts of Cd, led to the conclusion that zizania aquatica was not an ideal cash crop in Yixing. Furthermore, the labile Cd concentrations which were obtained by the DGT technique and dissolved in the soil solution showed a significant correlation with the Cd concentrations of the biota accumulation. However, the ex situ methods and the microwave digestion-obtained Cd concentrations showed a poor correlation with the accumulated Cd concentration in plant tissue. Correspondingly, the multiple linear regression models were built for fundamental analysis of the performance of different methods available for Cd bioavailability evaluation. The correlation coefficients of DGT obtained by the improved multiple linear regression model have not significantly improved compared to the coefficients obtained by the simple linear regression model. The results revealed that DGT was a robust measurement, which could obtain the labile Cd concentrations independent of the physicochemical features' variation in the soil ecosystem. Consequently, these findings provide stronger evidence that DGT is an effective and ideal tool for labile Cd evaluation in Yixing.

The Evaluation on the Cadmium Net Concentration for Soil Ecosystems

PubMed Central

Yao, Yu; Wang, Pei-Fang; Wang, Chao; Hou, Jun; Miao, Ling-Zhan

2017-01-01

Yixing, known as the “City of Ceramics”, is facing a new dilemma: a raw material crisis. Cadmium (Cd) exists in extremely high concentrations in soil due to the considerable input of industrial wastewater into the soil ecosystem. The in situ technique of diffusive gradients in thin film (DGT), the ex situ static equilibrium approach (HAc, EDTA and CaCl2), and the dissolved concentration in soil solution, as well as microwave digestion, were applied to predict the Cd bioavailability of soil, aiming to provide a robust and accurate method for Cd bioavailability evaluation in Yixing. Moreover, the typical local cash crops—paddy and zizania aquatica—were selected for Cd accumulation, aiming to select the ideal plants with tolerance to the soil Cd contamination. The results indicated that the biomasses of the two applied plants were sufficiently sensitive to reflect the stark regional differences of different sampling sites. The zizania aquatica could effectively reduce the total Cd concentration, as indicated by the high accumulation coefficients. However, the fact that the zizania aquatica has extremely high transfer coefficients, and its stem, as the edible part, might accumulate large amounts of Cd, led to the conclusion that zizania aquatica was not an ideal cash crop in Yixing. Furthermore, the labile Cd concentrations which were obtained by the DGT technique and dissolved in the soil solution showed a significant correlation with the Cd concentrations of the biota accumulation. However, the ex situ methods and the microwave digestion-obtained Cd concentrations showed a poor correlation with the accumulated Cd concentration in plant tissue. Correspondingly, the multiple linear regression models were built for fundamental analysis of the performance of different methods available for Cd bioavailability evaluation. The correlation coefficients of DGT obtained by the improved multiple linear regression model have not significantly improved compared to the coefficients obtained by the simple linear regression model. The results revealed that DGT was a robust measurement, which could obtain the labile Cd concentrations independent of the physicochemical features’ variation in the soil ecosystem. Consequently, these findings provide stronger evidence that DGT is an effective and ideal tool for labile Cd evaluation in Yixing. PMID:28287500

Tyrosine decarboxylase activity of enterococci grown in media with different nutritional potential: tyramine and 2-phenylethylamine accumulation and tyrDC gene expression.

PubMed

Bargossi, Eleonora; Tabanelli, Giulia; Montanari, Chiara; Lanciotti, Rosalba; Gatto, Veronica; Gardini, Fausto; Torriani, Sandra

2015-01-01

The ability to accumulate tyramine and 2-phenylethylamine by two strains of Enterococcus faecalis and two strains Enterococcus faecium was evaluated in two cultural media added or not with tyrosine. All the enterococcal strains possessed a tyrosine decarboxylase (tyrDC) which determined tyramine accumulation in all the conditions tested, independently on the addition of high concentration of free tyrosine. Enterococci differed in rate and level of biogenic amines accumulation. E. faecalis EF37 and E. faecium FC12 produced tyramine in high amount since the exponential growth phase, while 2-phenylethylamine was accumulated when tyrosine was depleted. E. faecium FC12 and E. faecalis ATCC 29212 showed a slower tyraminogenic activity which took place mainly in the stationary phase up to 72 h of incubation. Moreover, E. faecalis ATCC 29212 produced 2-phenylethylamine only in the media without tyrosine added. In BHI added or not with tyrosine the tyrDC gene expression level differed considerably depending on the strains and the growth phase. In particular, the tyrDC gene expression was high during the exponential phase in rich medium for all the strains and subsequently decreased except for E. faecium FC12. Even if tyrDC presence is common among enterococci, this study underlines the extremely variable decarboxylating potential of strains belonging to the same species, suggesting strain-dependent implications in food safety.

Enhancing protein to extremely high content in photosynthetic bacteria during biogas slurry treatment.

PubMed

Yang, Anqi; Zhang, Guangming; Meng, Fan; Lu, Pei; Wang, Xintian; Peng, Meng

2017-12-01

This work proposed a novel approach to achieve an extremely high protein content in photosynthetic bacteria (PSB) using biogas slurry as a culturing medium. The results showed the protein content of PSB could be enhanced strongly to 90% in the biogas slurry, which was much higher than reported microbial protein contents. The slurry was partially purified at the same time. Dark-aerobic was more beneficial than light-anaerobic condition for protein accumulation. High salinity and high ammonia of the biogas slurry were the main causes for protein enhancement. In addition, the biogas slurry provided a good buffer system for PSB to grow. The biosynthesis mechanism of protein in PSB was explored according to theoretical analysis. During biogas slurry treatment, the activities of glutamate synthase and glutamine synthetase were increased by 26.55%, 46.95% respectively. Copyright © 2017 Elsevier Ltd. All rights reserved.

Geomorphic Complexity of Sequential Fire and Floods in Mountain Watersheds

NASA Astrophysics Data System (ADS)

Brogan, D. J.; Nelson, P. A.; MacDonald, L. H.; Morgan, J. A.

2017-12-01

Fires and floods are important drivers of fluvial geomorphic changes. While each has been studied independently, there have been almost no situations where the hydrologic and geomorphic effects of fires and extreme floods could be compared at the watershed scale. Following the 2012 High Park fire in montane northcentral Colorado we began intensively monitoring channel changes in two 15 km2 watersheds (Skin Gulch and Hill Gulch) burned primarily at moderate to high severity. Summer thunderstorms resulted in extensive hillslope erosion and deposition in the valley bottoms, and subsequent incision through these deposits occurred due to spring snowmelt and elevated baseflows. The complex response associated with this state change from unburned to burned can be completely disrupted and overwhelmed by the larger changes resulting from extreme floods. Fifteen months after burning, both watersheds experienced an extreme flood resulting from a long-duration rainstorm; however, the geomorphic changes resulting from this flood differed markedly between the two watersheds. In Skin Gulch, sustained high flows from the September 2013 flood excavated nearly all of the accumulated sediment, expanded the active channel, and either scoured to bedrock or armored the bed with coarser substrate. Geomorphic changes in Hill Gulch due to the September 2013 flood, however, were small. The disparity between watersheds is likely the legacy of the catastrophic 1976 Big Thompson flood, which scoured out much of the previously accumulated sediment in Hill Gulch but did not appreciably impact Skin Gulch. These different sequences of disturbances indicate that fires in the Rocky Mountains often generate significant and dynamic geomorphic changes over sub-decadal timescales, while extreme floods can result in much longer lasting geomorphic changes. Our results allow us to compare the geomorphic sensitivity for different sequences of fire and floods, and propose a new conceptual model to explain the complicated interactions between the effects of fires and floods on the landscape.

Two-dimensional electronic transport and surface electron accumulation in MoS2.

PubMed

Siao, M D; Shen, W C; Chen, R S; Chang, Z W; Shih, M C; Chiu, Y P; Cheng, C-M

2018-04-12

Because the surface-to-volume ratio of quasi-two-dimensional materials is extremely high, understanding their surface characteristics is crucial for practically controlling their intrinsic properties and fabricating p-type and n-type layered semiconductors. Van der Waals crystals are expected to have an inert surface because of the absence of dangling bonds. However, here we show that the surface of high-quality synthesized molybdenum disulfide (MoS 2 ) is a major n-doping source. The surface electron concentration of MoS 2 is nearly four orders of magnitude higher than that of its inner bulk. Substantial thickness-dependent conductivity in MoS 2 nanoflakes was observed. The transfer length method suggested the current transport in MoS 2 following a two-dimensional behavior rather than the conventional three-dimensional mode. Scanning tunneling microscopy and angle-resolved photoemission spectroscopy measurements confirmed the presence of surface electron accumulation in this layered material. Notably, the in situ-cleaved surface exhibited a nearly intrinsic state without electron accumulation.

Unprecedented last-glacial mass accumulation rates determined by luminescence dating of loess from western Nebraska

USGS Publications Warehouse

Roberts, H.M.; Muhs, D.R.; Wintle, A.G.; Duller, G.A.T.; Bettis, E. Arthur

2003-01-01

A high-resolution chronology for Peoria (last glacial period) Loess from three sites in Nebraska, midcontinental North America, is determined by applying optically stimulated luminescence (OSL) dating to 35-50 ??m quartz. At Bignell Hill, Nebraska, an OSL age of 25,000 yr near the contact of Peoria Loess with the underlying Gilman Canyon Formation shows that dust accumulation occurred early during the last glacial maximum (LGM), whereas at Devil's Den and Eustis, Nebraska, basal OSL ages are significantly younger (18,000 and 21,000 yr, respectively). At all three localities, dust accumulation ended at some time after 14,000 yr ago. Mass accumulation rates (MARs) for western Nebraska, calculated using the OSL ages, are extremely high from 18,000 to 14,000 yr-much higher than those calculated for any other pre-Holocene location worldwide. These unprecedented MARs coincide with the timing of a mismatch between paleoenvironmental evidence from central North America, and the paleoclimate simulations from atmospheric global circulation models (AGCMs). We infer that the high atmospheric dust loading implied by these MARs may have played an important role, through radiative forcing, in maintaining a colder-than-present climate over central North America for several thousand years after summer insolation exceeded present-day values. ?? 2003 Elsevier Science (USA). All rights reserved.

Meteorological Drivers of Extreme Air Pollution Events

NASA Astrophysics Data System (ADS)

Horton, D. E.; Schnell, J.; Callahan, C. W.; Suo, Y.

2017-12-01

The accumulation of pollutants in the near-surface atmosphere has been shown to have deleterious consequences for public health, agricultural productivity, and economic vitality. Natural and anthropogenic emissions of ozone and particulate matter can accumulate to hazardous concentrations when atmospheric conditions are favorable, and can reach extreme levels when such conditions persist. Favorable atmospheric conditions for pollutant accumulation include optimal temperatures for photochemical reaction rates, circulation patterns conducive to pollutant advection, and a lack of ventilation, dispersion, and scavenging in the local environment. Given our changing climate system and the dual ingredients of poor air quality - pollutants and the atmospheric conditions favorable to their accumulation - it is important to characterize recent changes in favorable meteorological conditions, and quantify their potential contribution to recent extreme air pollution events. To facilitate our characterization, this study employs the recently updated Schnell et al (2015) 1°×1° gridded observed surface ozone and particulate matter datasets for the period of 1998 to 2015, in conjunction with reanalysis and climate model simulation data. We identify extreme air pollution episodes in the observational record and assess the meteorological factors of primary support at local and synoptic scales. We then assess (i) the contribution of observed meteorological trends (if extant) to the magnitude of the event, (ii) the return interval of the meteorological event in the observational record, simulated historical climate, and simulated pre-industrial climate, as well as (iii) the probability of the observed meteorological trend in historical and pre-industrial climates.

Data informatics for the Detection, Characterization, and Attribution of Climate Extremes

NASA Astrophysics Data System (ADS)

Collins, W.; Wehner, M. F.; O'Brien, T. A.; Paciorek, C. J.; Krishnan, H.; Johnson, J. N.; Prabhat, M.

2015-12-01

The potential for increasing frequency and intensity of extremephenomena including downpours, heat waves, and tropical cyclonesconstitutes one of the primary risks of climate change for society andthe environment. The challenge of characterizing these risks is thatextremes represent the "tails" of distributions of atmosphericphenomena and are, by definition, highly localized and typicallyrelatively transient. Therefore very large volumes of observationaldata and projections of future climate are required to quantify theirproperties in a robust manner. Massive data analytics are required inorder to detect individual extremes, accumulate statistics on theirproperties, quantify how these statistics are changing with time, andattribute the effects of anthropogenic global warming on thesestatistics. We describe examples of the suite of techniques the climate communityis developing to address these analytical challenges. The techniquesinclude massively parallel methods for detecting and trackingatmospheric rivers and cyclones; data-intensive extensions togeneralized extreme value theory to summarize the properties ofextremes; and multi-model ensembles of hindcasts to quantify theattributable risk of anthropogenic influence on individual extremes.We conclude by highlighting examples of these methods developed by ourCASCADE (Calibrated and Systematic Characterization, Attribution, andDetection of Extremes) project.

Extreme diel dissolved oxygen and carbon cycles in shallow vegetated lakes.

PubMed

Andersen, Mikkel R; Kragh, Theis; Sand-Jensen, Kaj

2017-09-13

A common perception in limnology is that shallow lakes are homogeneously mixed owing to their small water volume. However, this perception is largely gained by downscaling knowledge from large lakes to their smaller counterparts. Here we show that shallow vegetated lakes (less than 0.6 m), in fact, undergo recurring daytime stratification and nocturnal mixing accompanied by extreme chemical variations during summer. Dense submerged vegetation effectively attenuates light and turbulence generating separation between warm surface waters and much colder bottom waters. Photosynthesis in surface waters produces oxygen accumulation and CO 2 depletion, whereas respiration in dark bottom waters causes anoxia and CO 2 accumulation. High daytime pH in surface waters promotes precipitation of CaCO 3 which is re-dissolved in bottom waters. Nocturnal convective mixing re-introduces oxygen into bottom waters for aerobic respiration and regenerated inorganic carbon into surface waters, which supports intense photosynthesis. Our results reconfigure the basic understanding of local environmental gradients in shallow lakes, one of the most abundant freshwater habitats globally. © 2017 The Author(s).

The age of the meteorite recovery surfaces of Roosevelt County, New Mexico, USA

NASA Technical Reports Server (NTRS)

Zolensky, Michael E.; Rendell, Helen M.; Wilson, Ivan; Wells, Gordon L.

1992-01-01

We have obtained minimum age estimates for the sand units underlying the two largest meteorite deflation surfaces in Roosevelt County, New Mexico, USA, using thermoluminescence dating techniques. The dates obtained ranged from 53.5 (+/- 5.4) to 95.2 (+/- 9.5) ka, and must be considered lower limits for the terrestrial ages of the meteorites found within these specific deflation surfaces. These ages greatly exceed previous measurements from adjacent meteorite-producing deflation basins. We find that Roosevelt County meteorites are probably terrestrial contemporaries of the meteorites found at most accumulation zones in Antarctica. The apparent high meteorite accumulation rate reported for Roosevelt County by Zolensky et al. (1990) is incorrect, as it used an age of 16 ka for all Roosevelt County recovery surfaces. We conclude that the extreme variability of terrestrial ages of the Roosevelt County deflation surfaces effectively precludes their use for calculations of the meteorite accumulation rate at the Earth's surface.

Molybdenum accumulation in Cariaco basin sediment over the past 24 k.y.: A record of water-column anoxia and climate

USGS Publications Warehouse

Dean, W.E.; Piper, D.Z.; Peterson, L.C.

1999-01-01

Molybdenum (Mo) concentrations in a sediment core from the Cariaco basin on the Venezuelan continental shelf can be partitioned between a marine fraction and a terrigenous fraction. The accumulation rate of the marine fraction of Mo increased abruptly 15 000 calendar years ago (15 ka), from 4 ??g ?? cm-2 ?? yr-1, and then decreased abruptly at 9 ka. The accumulation rate remained high throughout this 6 k.y. period, but exhibited maxima at 15-14 and 12.5 ka, corresponding in time to meltwater pulse IA into the Gulf of Mexico and the onset of the Younger Dryas cold event, respectively. The marine fraction of Mo is interpreted in terms of redox conditions of bottom water, as dictated by both the flux of settling organic matter and bottom-water residence time. Correspondence between geochemical extremes in this core with changes in sea level and global climate demonstrates the high degree to which this ocean-margin basin has responded to the paleoceanographic regime throughout the past 24 k.y.

Characterization of extreme air-sea turbulent fluxes

NASA Astrophysics Data System (ADS)

Gulev, Sergey; Belyaev, Konstantin

2017-04-01

Extreme ocean-atmosphere turbulent fluxes play a critical role in the convective processes in the mid and subpolar latitudes and may also affect a variety of atmospheric processes, such as generation and re-intensification of extreme cyclones in the areas of the mid latitude storm tracks. From the ocean dynamics perspective, specifically for quantifying extreme vertical mixing, characterization of the extreme fluxes requires, besides estimation of the extreme events, also consideration of the relative extremeness of surface fluxes and their timing, e.g. the duration of periods of high surface fluxes. In order to comprehensively characterize extreme turbulent fluxes at sea surface we propose a formalism based upon probability density distributions of surface turbulent fluxes and flux-related variables. Individual absolute flux extremes were derived using Modified Fisher-Tippett (MFT) distribution of turbulent fluxes. Then, we extend this distribution to the fractional distribution, characterizing the fraction of time-integrated turbulent heat flux provided by the fluxes exceeding a given percentile. Finally, we consider the time durations during which fluxes of a given intensity provide extreme accumulations of heat loss from the surface. For estimation of these characteristics of surface fluxes we use fluxes recomputed from the state variables available from modern era reanalyses (ERA-Interim, MERRA and CFSR) for the period from 1979 onwards. Applications of the formalism to the VOS (Voluntary Observing Ship) - based surface fluxes are also considered. We discuss application of the new metrics of mesoscale and synoptic variability of surface fluxes to the dynamics of mixed layer depth in the North Atlantic.

Geochemistry of selenium.

PubMed

Kabata-Pendias, A

1998-01-01

Selenium (Se) is one of the most peculiar chemical elements in the geo- and biospheres. It partly resembles sulfur and tellurium; however, its behavior in the geosphere and its functions in the biosphere are very specific. Despite a relatively large database, its cycling in both the natural environment and in that modified by human activities requires further study. Selenium is rather concentrated in the geospheric cycle and is also bioconcentrated. The values of its accumulation ratios are: 5 for soil/sandstone, 2 for animal tissues/sandstone, and 5 for animal tissues/grain. For a specific plant/soil system, the bioconcentration factor for plants always has to be estimated because some plants can absorb extremely high concentrations of Se. Their ability to accumulate and tolerate high Se levels is related to different Se metabolisms. These plants play a significant role in geochemical prospecting and animal nutrition. This paper presents some geochemical observations toward a better understanding of the environmental properties of Se.

Adaptation of the nematode Caenorhabditis elegans to extreme osmotic stress.

PubMed

Lamitina, S Todd; Morrison, Rebecca; Moeckel, Gilbert W; Strange, Kevin

2004-04-01

The ability to control osmotic balance is essential for cellular life. Cellular osmotic homeostasis is maintained by accumulation and loss of inorganic ions and organic osmolytes. Although osmoregulation has been studied extensively in many cell types, major gaps exist in our molecular understanding of this essential process. Because of its numerous experimental advantages, the nematode Caenorhabditis elegans provides a powerful model system to characterize the genetic basis of animal cell osmoregulation. We therefore characterized the ability of worms to adapt to extreme osmotic stress. Exposure of worms to high-salt growth agar causes rapid shrinkage. Survival is normal on agar containing up to 200 mM NaCl. When grown on 200 mM NaCl for 2 wk, worms are able to survive well on agar containing up to 500 mM NaCl. HPLC analysis demonstrated that levels of the organic osmolyte glycerol increase 15- to 20-fold in nematodes grown on 200 mM NaCl agar. Accumulation of glycerol begins 3 h after exposure to hypertonic stress and peaks by 24 h. Glycerol accumulation is mediated primarily by synthesis from metabolic precursors. Consistent with this finding, hypertonicity increases transcriptional expression of glycerol 3-phosphate dehydrogenase, an enzyme that is rate limiting for hypertonicity-induced glycerol synthesis in yeast. Worms adapted to high salt swell and then return to their initial body volume when exposed to low-salt agar. During recovery from hypertonic stress, glycerol levels fall rapidly and glycerol excretion increases approximately fivefold. Our studies provide the first description of osmotic adaptation in C. elegans and provide the foundation for genetic and functional genomic analysis of animal cell osmoregulation.

Concurrent overexpression of ornithine decarboxylase and spermidine/spermine N(1)-acetyltransferase further accelerates the catabolism of hepatic polyamines in transgenic mice.

PubMed Central

Suppola, S; Heikkinen, S; Parkkinen, J J; Uusi-Oukari, M; Korhonen, V P; Keinänen, T; Alhonen, L; Jänne, J

2001-01-01

We have generated a hybrid transgenic mouse line overexpressing both ornithine decarboxylase (ODC) and spermidine/spermine N(1)-acetyltransferase (SSAT) under the control of the mouse metallothionein (MT) I promoter. In comparison with singly transgenic animals overexpressing SSAT, the doubly transgenic mice unexpectedly displayed much more striking signs of activated polyamine catabolism, as exemplified by a massive putrescine accumulation and an extreme reduction of hepatic spermidine and spermine pools. Interestingly, the profound depletion of the higher polyamines in the hybrid animals occurred in the presence of strikingly high ODC activity and tremendous putrescine accumulation. Polyamine catabolism in the doubly transgenic mice could be enhanced further by administration of zinc or the polyamine analogue N(1),N(11)-diethylnorspermine. In tracer experiments with [(14)C]spermidine we found that, in comparison with syngenic animals, both MT-ODC and MT-SSAT mice possessed an enhanced efflux mechanism for hepatic spermidine. In the MT-ODC animals this mechanism apparently operated in the absence of measurable SSAT activity. In the hybrid animals, spermidine efflux was stimulated further in comparison with the singly transgenic animals. In spite of a dramatic accumulation of putrescine and a profound reduction of the spermidine and spermine pools, only marginal changes were seen in the level of ODC antizyme. Even though the hybrid animals showed no liver or other organ-specific overt toxicity, except an early and permanent loss of hair, their life span was greatly reduced. These results can be understood from the perspective that catabolism is the overriding regulatory mechanism in the metabolism of the polyamines and that, even under conditions of severe depletion of spermidine and spermine, extremely high tissue pools of putrescine are not driven further to replenish the pools of the higher polyamines. PMID:11513732

Deep sequencing of natural and experimental populations of Drosophila melanogaster reveals biases in the spectrum of new mutations.

PubMed

Assaf, Zoe June; Tilk, Susanne; Park, Jane; Siegal, Mark L; Petrov, Dmitri A

2017-12-01

Mutations provide the raw material of evolution, and thus our ability to study evolution depends fundamentally on having precise measurements of mutational rates and patterns. We generate a data set for this purpose using (1) de novo mutations from mutation accumulation experiments and (2) extremely rare polymorphisms from natural populations. The first, mutation accumulation (MA) lines are the product of maintaining flies in tiny populations for many generations, therefore rendering natural selection ineffective and allowing new mutations to accrue in the genome. The second, rare genetic variation from natural populations allows the study of mutation because extremely rare polymorphisms are relatively unaffected by the filter of natural selection. We use both methods in Drosophila melanogaster , first generating our own novel data set of sequenced MA lines and performing a meta-analysis of all published MA mutations (∼2000 events) and then identifying a high quality set of ∼70,000 extremely rare (≤0.1%) polymorphisms that are fully validated with resequencing. We use these data sets to precisely measure mutational rates and patterns. Highlights of our results include: a high rate of multinucleotide mutation events at both short (∼5 bp) and long (∼1 kb) genomic distances, showing that mutation drives GC content lower in already GC-poor regions, and using our precise context-dependent mutation rates to predict long-term evolutionary patterns at synonymous sites. We also show that de novo mutations from independent MA experiments display similar patterns of single nucleotide mutation and well match the patterns of mutation found in natural populations. © 2017 Assaf et al.; Published by Cold Spring Harbor Laboratory Press.

Revegetation of extremely acid mine soils based on aided phytostabilization: A case study from southern China.

PubMed

Yang, Sheng-Xiang; Liao, Bin; Yang, Zhi-Hui; Chai, Li-Yuan; Li, Jin-Tian

2016-08-15

Acidification is a major constraint for revegetation of sulphidic metal-contaminated soils, as exemplified by the limited literature reporting the successful phytostabilization of mine soils associated with pH<3 and high acidification potential. In this study, a combination of ameliorants (lime and chicken manure) and five acid-tolerant plant species has been employed in order to establish a self-sustaining vegetation cover on an extremely acid (pH<3) polymetallic pyritic mine waste heap in southern China exhibiting high acidification potential. The results from the first two-year data showed that the addition of the amendments and the establishment of a plant cover were effective in preventing soil acidification. Net acid-generating potential of the mine soil decreased steadily, whilst pH and acid neutralization capacity increased over time. All the five acid-tolerant plants colonized successfully in the acidic metal-contaminated soil and developed a good vegetation cover within six months, and subsequent vegetation development enhanced organic matter accumulation and nutrient element status in the mine soil. The two-year remediation program performed on this extremely acid metalliferous soil indicated that aided phytostabilization can be a practical and effective restoration strategy for such extremely acid mine soils. Copyright © 2016. Published by Elsevier B.V.

Exopolysaccharides from extremophiles: from fundamentals to biotechnology.

PubMed

Nicolaus, Barbara; Kambourova, Margarita; Oner, Ebru Toksoy

2010-09-01

Exopolysaccharides (EPSs) make up a substantial component of the extracellular polymers surrounding most microbial cells in extreme environments like Antarctic ecosystems, saline lakes, geothermal springs or deep sea hydrothermal vents. The extremophiles have developed various adaptations, enabling them to compensate for the deleterious effects of extreme conditions, e.g. high temperatures, salt, low pH or temperature, high radiation. Among these adaptation strategies, EPS biosynthesis is one of the most common protective mechanisms. The unusual metabolic pathways revealed in some extremophiles raised interest in extremophilic microorganisms as potential producers of EPSs with novel and unusual characteristics and functional activities under extreme conditions. Even though the accumulated knowledge on the structural and theological properties of EPSs from extremophiles is still very limited, it reveals a variety in properties, which may not be found in more traditional polymers. Both extremophilic microorganisms and their EPSs suggest several biotechnological advantages, like short fermentation processes for thermophiles and easily formed and stable emulsions of EPSs from psychrophiles. Unlike mesophilic producers of EPSs, many of them being pathogenic, extremophilic microorganisms provide non-pathogenic products, appropriate for applications in the food, pharmaceutical and cosmetics industries as emulsifiers, stabilizers, gel agents, coagulants, thickeners and suspending agents. The commercial value of EPSs synthesized by microorganisms from extreme habitats has been established recently.

Room temperature-synthesized vertically aligned InSb nanowires: electrical transport and field emission characteristics

PubMed Central

2013-01-01

Vertically aligned single-crystal InSb nanowires were synthesized via the electrochemical method at room temperature. The characteristics of Fourier transform infrared spectrum revealed that in the syntheses of InSb nanowires, energy bandgap shifts towards the short wavelength with the occurrence of an electron accumulation layer. The current–voltage curve, based on the metal–semiconductor–metal model, showed a high electron carrier concentration of 2.0 × 1017 cm−3 and a high electron mobility of 446.42 cm2 V−1 s−1. Additionally, the high carrier concentration of the InSb semiconductor with the surface accumulation layer induced a downward band bending effect that reduces the electron tunneling barrier. Consequently, the InSb nanowires exhibit significant field emission properties with an extremely low turn-on field of 1.84 V μm−1 and an estimative threshold field of 3.36 V μm−1. PMID:23399075

Multi-window detection for P-wave in electrocardiograms based on bilateral accumulative area.

PubMed

Chen, Riqing; Huang, Yingsong; Wu, Jian

2016-11-01

P-wave detection is one of the most challenging aspects in electrocardiograms (ECGs) due to its low amplitude, low frequency, and variable waveforms. This work introduces a novel multi-window detection method for P-wave delineation based on the bilateral accumulative area. The bilateral accumulative area is calculated by summing the areas covered by the P-wave curve with left and right sliding windows. The onset and offset of a positive P-wave correspond to the local maxima of the area detector. The position drift and difference in area variation of local extreme points with different windows are used to systematically combine multi-window and 12-lead synchronous detection methods, which are used to screen the optimization boundary points from all extreme points of different window widths and adaptively match the P-wave location. The proposed method was validated with ECG signals from various databases, including the Standard CSE Database, T-Wave Alternans Challenge Database, PTB Diagnostic ECG Database, and the St. Petersburg Institute of Cardiological Technics 12-Lead Arrhythmia Database. The average sensitivity Se was 99.44% with a positive predictivity P+ of 99.37% for P-wave detection. Standard deviations of 3.7 and 4.3ms were achieved for the onset and offset of P-waves, respectively, which is in agreement with the accepted tolerances required by the CSE committee. Compared with well-known delineation methods, this method can achieve high sensitivity and positive predictability using a simple calculation process. The experiment results suggest that the bilateral accumulative area could be an effective detection tool for ECG signal analysis. Copyright © 2016 Elsevier Ltd. All rights reserved.

Quality-control of an hourly rainfall dataset and climatology of extremes for the UK.

PubMed

Blenkinsop, Stephen; Lewis, Elizabeth; Chan, Steven C; Fowler, Hayley J

2017-02-01

Sub-daily rainfall extremes may be associated with flash flooding, particularly in urban areas but, compared with extremes on daily timescales, have been relatively little studied in many regions. This paper describes a new, hourly rainfall dataset for the UK based on ∼1600 rain gauges from three different data sources. This includes tipping bucket rain gauge data from the UK Environment Agency (EA), which has been collected for operational purposes, principally flood forecasting. Significant problems in the use of such data for the analysis of extreme events include the recording of accumulated totals, high frequency bucket tips, rain gauge recording errors and the non-operation of gauges. Given the prospect of an intensification of short-duration rainfall in a warming climate, the identification of such errors is essential if sub-daily datasets are to be used to better understand extreme events. We therefore first describe a series of procedures developed to quality control this new dataset. We then analyse ∼380 gauges with near-complete hourly records for 1992-2011 and map the seasonal climatology of intense rainfall based on UK hourly extremes using annual maxima, n-largest events and fixed threshold approaches. We find that the highest frequencies and intensities of hourly extreme rainfall occur during summer when the usual orographically defined pattern of extreme rainfall is replaced by a weaker, north-south pattern. A strong diurnal cycle in hourly extremes, peaking in late afternoon to early evening, is also identified in summer and, for some areas, in spring. This likely reflects the different mechanisms that generate sub-daily rainfall, with convection dominating during summer. The resulting quality-controlled hourly rainfall dataset will provide considerable value in several contexts, including the development of standard, globally applicable quality-control procedures for sub-daily data, the validation of the new generation of very high-resolution climate models and improved understanding of the drivers of extreme rainfall.

Nitrogen Accumulation and Partitioning in High Arctic Tundra from Extreme Atmospheric N Deposition Events

NASA Astrophysics Data System (ADS)

Phoenix, G. K.; Osborn, A.; Blaud, A.; Press, M. C.; Choudhary, S.

2013-12-01

Arctic ecosystems are threatened by pollution from extreme atmospheric nitrogen (N) deposition events. These events occur from the long-range transport of reactive N from pollution sources at lower latitudes and can deposit up to 80% of the annual N deposition in just a few days. To date, the fate and impacts of these extreme pollutant events has remained unknown. Using a field simulation study, we undertook the first assessment of the fate of acutely deposited N on arctic tundra. Extreme N deposition events were simulated on field plots at Ny-Ålesund, Svalbard (79oN) at rates of 0, 0.04, 0.4 and 1.2 g N m-2 yr-1 applied as NH4NO3 solution over 4 days, with 15N tracers used in the second year to quantify the fate of the deposited N in the plant, soil, microbial and leachate pools. Separate applications of 15NO3- and 15NH4+ were also made to determine the importance of N form in the fate of N. Recovery of the 15N tracer at the end of the first growing season approached 100% of the 15N applied irrespective of treatment level, demonstrating the considerable capacity of High Arctic tundra to capture pollutant N from extreme deposition events. Most incorporation of the 15N was found in bryophytes, followed by the dominant vascular plant (Salix polaris) and the microbial biomass of the soil organic layer. Total recovery remained high in the second growing season (average of 90%), indicating highly conservative N retention. Between the two N forms, recovery of 15NO3- and 15NH4+ were equal in the non-vascular plants, whereas in the vascular plants (particularly Salix polaris) recovery of 15NO3- was four times higher than of 15NH4+. Overall, these findings show that High Arctic tundra has considerable capacity to capture and retain the pollutant N deposited in acute extreme deposition events. Given they can represent much of the annual N deposition, extreme deposition events may be more important than increased chronic N deposition as a pollution source. Furthermore, current extreme N deposition events -and the predicted future increase in extreme deposition events- may represent an important source of eutrophication to 'pristine' arctic tundra.

Edema: diagnosis and management.

PubMed

Trayes, Kathryn P; Studdiford, James S; Pickle, Sarah; Tully, Amber S

2013-07-15

Edema is an accumulation of fluid in the interstitial space that occurs as the capillary filtration exceeds the limits of lymphatic drainage, producing noticeable clinical signs and symptoms. The rapid development of generalized pitting edema associated with systemic disease requires timely diagnosis and management. The chronic accumulation of edema in one or both lower extremities often indicates venous insufficiency, especially in the presence of dependent edema and hemosiderin deposition. Skin care is crucial in preventing skin breakdown and venous ulcers. Eczematous (stasis) dermatitis can be managed with emollients and topical steroid creams. Patients who have had deep venous thrombosis should wear compression stockings to prevent postthrombotic syndrome. If clinical suspicion for deep venous thrombosis remains high after negative results are noted on duplex ultrasonography, further investigation may include magnetic resonance venography to rule out pelvic or thigh proximal venous thrombosis or compression. Obstructive sleep apnea may cause bilateral leg edema even in the absence of pulmonary hypertension. Brawny, nonpitting skin with edema characterizes lymphedema, which can present in one or both lower extremities. Possible secondary causes of lymphedema include tumor, trauma, previous pelvic surgery, inguinal lymphadenectomy, and previous radiation therapy. Use of pneumatic compression devices or compression stockings may be helpful in these cases.

Associating extreme precipitation events to parent cyclones in gridded data

NASA Astrophysics Data System (ADS)

Rhodes, Ruari; Shaffrey, Len; Gray, Sue

2015-04-01

When analysing the relationship of regional precipitation to its parent cyclone, it is insufficient to consider the cyclone's region of influence as a fixed radius from the centre due to the irregular shape of rain bands. A new method is therefore presented which allows the use of objective feature tracking data in the analysis of regional precipitation. Utilising the spatial extent of precipitation in gridded datasets, the most appropriate cyclone(s) may be associated with regional precipitation events. This method is applied in the context of an analysis of the influence of clustering and stalling of extra-tropical cyclones in the North Atlantic on total precipitation accumulations over England and Wales. Cyclone counts and residence times are presented for historical records (ERA-Interim) and future projections (HadGEM2-ES) of extreme (> 98th percentile) precipitation accumulations over England and Wales, for accumulation periods ranging from one day to one month.

The effects of temperature and salinity on phosphate levels in two euryhaline crustacean species

NASA Astrophysics Data System (ADS)

Spaargaren, D. H.; Richard, P.; Ceccaldi, H. J.

Total phoshate, inorganic phosphate and organic (phospholipid) phosphate concentrations were determined in the blood of Carcinus maenas and in whole-animal homogenates of Penaeus japonicus acclimatized to various salinities and a high or a low temperature. In the blood of Carcinus, total and inorganic P concentrations range between 1.0 and 4.5 mmol · l -1; the amount of phospholipids is negligeable. The higher values were found at more extreme salinities. Low temperature is associated with low phosphate concentrations, particularly at intermediate salinities. Total P concentrations in Penaeus homogenates range between 10 and 60 mmol · 1 -1; phospholipid concentrations range between zero and 50 mmol · 1 -1. The higher values are again found at the extreme salinities. Inorganic P concentrations are almost constant — ca 10 mmol · 1 -1. No apparent effect of temperature on phosphate concentrations was observed. The results show clearly that osmotic stress influences severely the phosphate metabolism of the two species studied. Both species are able to accumulate phosphate at all experimental temperature/salinity combinations used, even when deprived of food. At extreme salinities, large quantities of phosphate are accumulated and converted to organic P compounds, most likely as phospholipids associated with the cell membranes. These effects of osmotic conditions in phosphate metabolism may offer an explanation for the effect of Ca ++ on membrane permeability as the regulation of both ions may be strongly interrelated, often under hormonal control.

Source appointment of fine particle number and volume concentration during severe haze pollution in Beijing in January 2013.

PubMed

Liu, Zirui; Wang, Yuesi; Hu, Bo; Ji, Dongsheng; Zhang, Junke; Wu, Fangkun; Wan, Xin; Wang, Yonghong

2016-04-01

Extreme haze episodes repeatedly shrouded Beijing during the winter of 2012-2013, causing major environmental and health problems. To better understand these extreme events, particle number size distribution (PNSD) and particle chemical composition (PCC) data collected in an intensive winter campaign in an urban site of Beijing were used to investigate the sources of ambient fine particles. Positive matrix factorization (PMF) analysis resolved a total of eight factors: two traffic factors, combustion factors, secondary aerosol, two accumulation mode aerosol factors, road dust, and long-range transported (LRT) dust. Traffic emissions (54%) and combustion aerosol (27%) were found to be the most important sources for particle number concentration, whereas combustion aerosol (33%) and accumulation mode aerosol (37%) dominated particle volume concentrations. Chemical compositions and sources of fine particles changed dynamically in the haze episodes. An enhanced role of secondary inorganic species was observed in the formation of haze pollution. Regional transport played an important role for high particles, contribution of which was on average up to 24-49% during the haze episodes. Secondary aerosols from urban background presented the largest contributions (45%) for the rapid increase of fine particles in the severest haze episode. In addition, the invasion of LRT dust aerosols further elevated the fine particles during the extreme haze episode. Our results showed a clear impact of regional transport on the local air pollution, suggesting the importance of regional-scale emission control measures in the local air quality management of Beijing.

Sediment Dynamics Within Buffer Zone and Sinkhole Splay Areas Under Extreme Soil Disturbance Conditions.

PubMed

Schoonover, Jon E; Crim, Jackie F; Williard, Karl W J; Groninger, John W; Zaczek, James J; Pattumma, Klairoong

2015-09-01

Sedimentation dynamics were assessed in sinkholes within training areas at Ft. Knox Military Installation, a karst landscape subjected to decades of tracked vehicle use and extreme soil disturbance. Sinkholes sampled were sediment-laden and behaved as intermittent ponds. Dendrogeomorphic analyses were conducted using willow trees (Salix spp.) located around the edge of 18 sinkholes to estimate historical sedimentation rates, and buried bottles were installed in 20 sinkholes at the center, outer edge, and at the midpoint between the center and edge to estimate annual sedimentation rates. Sedimentation data were coupled with vegetation characteristics of sinkhole buffers to determine relationships among these variables. The dendrogeomorphic method estimated an average accumulation rate of 1.27 cm year(-1) translating to a sediment loss rate of 46.1 metric ton year(-1) from the training areas. However, sediment export to sinkholes was estimated to be much greater (118.6 metric ton year(-1)) via the bottle method. These data suggest that the latter method provided a more accurate estimate since accumulation was greater in the center of sinkholes compared to the periphery where dendrogeomorphic data were collected. Vegetation data were not tightly correlated with sedimentation rates, suggesting that further research is needed to identify a viable proxy for direct measures of sediment accumulation in this extreme deposition environment. Mitigation activities for the sinkholes at Ft. Knox's tank training area, and other heavily disturbed karst environments where extreme sedimentation exists, should consider focusing on flow path and splay area management.

Contemporary suspended sediment fluxes and accumulation processes in the small proglacial Sætrevatnet sub-catchment, Bødalen, Western Norway

NASA Astrophysics Data System (ADS)

Liermann, S.; Beylich, A. A.

2012-04-01

A combination of different process monitoring, lake sediment coring and sediment analysis methods and techniques were applied in order (i) to ascertain the hydro-meteorological controls of runoff generation, suspended sediment transport and sediment accumulation on the delta and in Lake Sætrevatnet and (ii) to define the role of the small proglacial lake Sætrevatnet within the basin-wide catchment routing system of the Bødalen valley-fjord system (Nordfjord area, western Norway). Within the Bødalen valley investigations of sediment transfer and sediment accumulation processes were focused on the small proglacial Sætrevatnet area in upper Bødalen. The proglacial Sætrevatnet valley segment shows the characteristic seasonal weather-depended runoff variation for glacierized drainage basins. Suspended sediment concentration varied closely related to water discharge. Hence, significant suspended sediment transport is associated to high runoff conditions during thermally induced summer glacier melt (when 61.9% of the annual suspended sediment yield was recorded in 2010) as well as to single extreme rainfall events (19.8% of the annual suspended sediment yield was recorded during a single extreme rainfall event in 2010). Solar radiation and the magnitude and frequency of extreme rainfall events were found to be crucial for the rate of sediment transport within the Sætrevatnet sub-catchment. Altogether, the annual suspended sediment yield is with 24.2 t km-2 notable lower as compared to other glacierized basins worldwide. Delta accumulation rates at the inlet of Lake Sætrevatnet of 4 cm yr-1 in 2009 and 3.5 cm yr-1 in 2010 as well as a mean annual delta advance of about 3 - 4 m as calculated from comparisons of aerial photographs point to an ongoing and rapid sediment infill of the Sætrevatnet valley basin. Lacustrine sediment sequence analysis and 210-Pb and 137-Cs dating of samples taken from the Lake Sætrevatnet confirm high annual accumulation rates. Based on a basic CSR model (with the assumption of a constant rate of 210-Pb supply) and additionally validated by 137-Cs activity an annual lake sedimentation rate of 1.7cm was calculated. Both the low suspended sediment yields and the high accumulation rates emphasize the importance of bedload and nearly to the channel beds transported sediments for the Sætrevatnet lake system. As a result, Lake Sætrevatnet currently traps about 80-85 % of the sediments delivered from the upstream located glacial and proglacial system highlighting the importance of small ephemeral lakes within larger valley-fjord sediment routing systems. As a next step the potential yearly pattern of laminations (varves) is discussed in association with the calculated sedimentation rates within the Sætrevatnet valley segment. ITRAX (XRF) analysis, magnetic susceptibility measurements and the interpretation of the potential varve/lamination thickness and composition enable the identification of different sedimentary processes and related discharge mechanisms within the Saetrevatnet sub-catchment. Rhythmites are tentatively associated to regional meteorological variables (temperature; precipitation, e.g. heavy rainfall events). Analysis of grain size composition, density and carbon (TOC, inorganic carbon using LECO) are carried out to characterize the laminated structure and to identify possible sediment sources.

Trace element accumulation in hawksbill turtles (Eretmochelys imbricata) and green turtles (Chelonia mydas) from Yaeyama Islands, Japan.

PubMed

Anan, Y; Kunito, T; Watanabe, I; Sakai, H; Tanabe, S

2001-12-01

Concentrations of 18 trace elements (V, Cr, Mn, Co, Cu, Zn, Se, Rb, Sr, Zr, Mo, Ag, Cd, Sb, Ba, Hg, Tl, and Pb) were determined in the liver, kidney, and muscle of green turtles (Chelonia mydas) and hawksbill turtles (Eretmochelys imbricata) from Yaeyama Islands, Okinawa, Japan. Accumulation features of trace elements in the three tissues were similar between green and hawksbill turtles. No gender differences in trace element accumulation in liver and kidney were found for most of the elements. Significant growth-dependent variations were found in concentrations of some elements in tissues of green and hawksbill turtles. Significant negative correlations (p < 0.05) were found between standard carapace length (SCL) and the concentrations of Cu, Zn, and Se in the kidney and V in muscle of green turtles and Mn in the liver, Rb and Ag in kidney, and Hg in muscle of hawksbill turtles. Concentrations of Sr, Mo, Ag, Sb, and Tl in the liver, Sb in kidney, and Sb and Ba in muscle of green turtles and Se and Hg in the liver and Co, Se, and Hg in kidney of hawksbill turtles increased with an increase in SCL (p < 0.05). Green and hawksbill turtles accumulated extremely high concentrations of Cu in the liver and Cd in kidney, whereas the levels of Hg in liver were low in comparison with those of other higher-trophic-level marine animals. High accumulation of Ag in the liver of green turtles was also observed. To evaluate the trophic transfer of trace elements, concentrations of trace elements were determined in stomach contents of green and hawksbill turtles. A remarkably high trophic transfer coefficient was found for Ag and Cd in green turtles and for Cd and Hg in hawksbill turtles.

Accumulation of Poly(3-hydroxybutyrate) Helps Bacterial Cells to Survive Freezing

PubMed Central

Krzyzanek, Vladislav; Mravec, Filip; Hrubanova, Kamila; Samek, Ota; Kucera, Dan; Benesova, Pavla; Marova, Ivana

2016-01-01

Accumulation of polyhydroxybutyrate (PHB) seems to be a common metabolic strategy adopted by many bacteria to cope with cold environments. This work aimed at evaluating and understanding the cryoprotective effect of PHB. At first a monomer of PHB, 3-hydroxybutyrate, was identified as a potent cryoprotectant capable of protecting model enzyme (lipase), yeast (Saccharomyces cerevisiae) and bacterial cells (Cupriavidus necator) against the adverse effects of freezing-thawing cycles. Further, the viability of the frozen–thawed PHB accumulating strain of C. necator was compared to that of the PHB non-accumulating mutant. The presence of PHB granules in cells was revealed to be a significant advantage during freezing. This might be attributed to the higher intracellular level of 3-hydroxybutyrate in PHB accumulating cells (due to the action of parallel PHB synthesis and degradation, the so-called PHB cycle), but the cryoprotective effect of PHB granules seems to be more complex. Since intracellular PHB granules retain highly flexible properties even at extremely low temperatures (observed by cryo-SEM), it can be expected that PHB granules protect cells against injury from extracellular ice. Finally, thermal analysis indicates that PHB-containing cells exhibit a higher rate of transmembrane water transport, which protects cells against the formation of intracellular ice which usually has fatal consequences. PMID:27315285

About climate variabilitiy leading the hydric condition of the soil in the rainfed region of Argentina

NASA Astrophysics Data System (ADS)

Pántano, V. C.; Penalba, O. C.

2013-05-01

Extreme events of temperature and rainfall have a socio-economic impact in the rainfed agriculture production region in Argentina. The magnitude of the impact can be analyzed through the water balance which integrates the characteristics of the soil and climate conditions. Changes observed in climate variables during the last decades affected the components of the water balance. As a result, a displacement of the agriculture border towards the west was produced, improving the agricultural production of the region. The objective of this work is to analyze how the variability of rainfall and temperature leads the hydric condition of the soil, with special focus on extreme events. The hydric conditions of the soil (HC= Excess- Deficit) were estimated from the monthly water balance (Thornthwaite and Mather method, 1957), using monthly potential evapotranspiration (PET) and monthly accumulated rainfall (R) for 33 stations (period 1970-2006). Information of temperature and rainfall was provided by National Weather Service and the effective capacity of soil water was considered from Forte Lay and Spescha (2001). An agricultural extreme condition occurs when soil moisture and rainfall are inadequate or excessive for the development of the crops. In this study, we define an extreme event when the variable is less (greater) than its 20% and 10% (80% and 90%) percentile. In order to evaluate how sensitive is the HC to water and heat stress in the region, different conditional probabilities were evaluated. There is a weaker response of HC to extreme low PET while extreme low R leads high values of HC. However, this behavior is not always observed, especially in the western region where extreme high and low PET show a stronger influence over the HC. Finally, to analyze the temporal variability of extreme PET and R, leading hydric condition of the soil, the number of stations presenting extreme conditions was computed for each month. As an example, interesting results were observed for April. During this month, the water recharge of the soil is crucial to let the winter crops manage with the scarce rainfalls occurring in the following months. In 1970, 1974, 1977, 1978 and 1997 more than 50% of the stations were under extreme high PET; while 1970, 1974, 1978 and 1988 presented more than 40% under extreme low R. Thus, the 70s was the more threatened decade of the period. Since the 80s (except for 1997), extreme dry events due to one variable or the other are mostly presented separately, over smaller areas. The response of the spatial distribution of HC is stronger when both variables present extreme conditions. In particular, during 1997 the region presents extreme low values of HC as a consequence of extreme low R and high PET. Communities dependent on agriculture are highly sensitive to climate variability and its extremes. In the studied region, it was shown that scarce water and heat stress contribute to the resulting hydric condition, producing strong impact over different productive activities. Extreme temperature seems to have a stronger influence over extreme unfavorable hydric conditions.

Metabolic analysis of kiwifruit (Actinidia deliciosa) berries from extreme genotypes reveals hallmarks for fruit starch metabolism

PubMed Central

Nardozza, Simona; MacRae, Elspeth A.; Sulpice, Ronan; Clearwater, Michael J.

2013-01-01

Tomato, melon, grape, peach, and strawberry primarily accumulate soluble sugars during fruit development. In contrast, kiwifruit (Actinidia Lindl. spp.) and banana store a large amount of starch that is released as soluble sugars only after the fruit has reached maturity. By integrating metabolites measured by gas chromatography–mass spectrometry, enzyme activities measured by a robot-based platform, and transcript data sets during fruit development of Actinidia deliciosa genotypes contrasting in starch concentration and size, this study identified the metabolic changes occurring during kiwifruit development, including the metabolic hallmarks of starch accumulation and turnover. At cell division, a rise in glucose (Glc) concentration was associated with neutral invertase (NI) activity, and the decline of both Glc and NI activity defined the transition to the cell expansion and starch accumulation phase. The high transcript levels of β-amylase 9 (BAM9) during cell division, prior to net starch accumulation, and the correlation between sucrose phosphate synthase (SPS) activity and sucrose suggest the occurrence of sucrose cycling and starch turnover. ADP-Glc pyrophosphorylase (AGPase) is identified as a key enzyme for starch accumulation in kiwifruit berries, as high-starch genotypes had 2- to 5-fold higher AGPase activity, which was maintained over a longer period of time and was also associated with enhanced and extended transcription of the AGPase large subunit 4 (APL4). The data also revealed that SPS and galactinol might affect kiwifruit starch accumulation, and suggest that phloem unloading into kiwifruit is symplastic. These results are relevant to the genetic improvement of quality traits such as sweetness and sugar/acid balance in a range of fruit species. PMID:24058160

Metabolic analysis of kiwifruit (Actinidia deliciosa) berries from extreme genotypes reveals hallmarks for fruit starch metabolism.

PubMed

Nardozza, Simona; Boldingh, Helen L; Osorio, Sonia; Höhne, Melanie; Wohlers, Mark; Gleave, Andrew P; MacRae, Elspeth A; Richardson, Annette C; Atkinson, Ross G; Sulpice, Ronan; Fernie, Alisdair R; Clearwater, Michael J

2013-11-01

Tomato, melon, grape, peach, and strawberry primarily accumulate soluble sugars during fruit development. In contrast, kiwifruit (Actinidia Lindl. spp.) and banana store a large amount of starch that is released as soluble sugars only after the fruit has reached maturity. By integrating metabolites measured by gas chromatography-mass spectrometry, enzyme activities measured by a robot-based platform, and transcript data sets during fruit development of Actinidia deliciosa genotypes contrasting in starch concentration and size, this study identified the metabolic changes occurring during kiwifruit development, including the metabolic hallmarks of starch accumulation and turnover. At cell division, a rise in glucose (Glc) concentration was associated with neutral invertase (NI) activity, and the decline of both Glc and NI activity defined the transition to the cell expansion and starch accumulation phase. The high transcript levels of β-amylase 9 (BAM9) during cell division, prior to net starch accumulation, and the correlation between sucrose phosphate synthase (SPS) activity and sucrose suggest the occurrence of sucrose cycling and starch turnover. ADP-Glc pyrophosphorylase (AGPase) is identified as a key enzyme for starch accumulation in kiwifruit berries, as high-starch genotypes had 2- to 5-fold higher AGPase activity, which was maintained over a longer period of time and was also associated with enhanced and extended transcription of the AGPase large subunit 4 (APL4). The data also revealed that SPS and galactinol might affect kiwifruit starch accumulation, and suggest that phloem unloading into kiwifruit is symplastic. These results are relevant to the genetic improvement of quality traits such as sweetness and sugar/acid balance in a range of fruit species.

Extreme mass flux from the glaciated, collisional St. Elias Orogen: Preliminary results from IODP Expedition 341 (Invited)

NASA Astrophysics Data System (ADS)

Gulick, S. P.; Jaeger, J. M.

2013-12-01

Integrated Ocean Drilling Program Expedition 341 drilled a cross-margin transect to investigate the linkages between global climate change, modification of the dynamics of surficial processes, and subsequent tectonic responses. The Gulf of Alaska (GoA) borders the St. Elias orogen, the highest coastal mountain range on Earth. Exp. 341 drilled five sites within a regional seismic reflection grid that spans from the distal Surveyor Fan to the continental shelf. More than 3000 m of high-quality core coupled with seismic reflection profiles collected with nested vertical resolution allows us to address the major objectives of drilling in the GoA. These objectives were to: 1) document the tectonic response of an active orogenic system to late Miocene to recent climate change; 2) establish the timing of advance/retreat phases of the northern Cordilleran ice sheet to test its relation to dynamics of other global ice sheets; 3) implement an expanded source-to-sink study of the interactions between glacial, tectonic, and oceanographic processes responsible for creation of one of the thickest Neogene high-latitude continental margin sequences; 4) understand the dynamics of productivity, nutrients, freshwater input to the ocean, and ocean circulation in the northeast Pacific and their role in the global carbon cycle, and 5) document the spatial and temporal behavior of the geomagnetic field at extremely high temporal resolution in an under-sampled region of the globe. The Exp. 341 cross-margin transect discovered transitions in sediment accumulation rates from >100 m/Ma at the distal site to > 1000 m/Ma in the proximal fan, slope and on the continental shelf that provide a telescoping view of strata formation from the Miocene to the Holocene. Complete recovery and development of spliced sedimentary records of the Pleistocene through Holocene were achieved at the distal, proximal, and slope Sites U1417, U1418, and U1419, respectively, because of exceptional piston core recovery coupled with real-time stratigraphic correlation. The 800-m deep U1417 records Miocene to Recent deposition in the distal Surveyor Fan including the onset of glaciation at the Plio-Pleistocene boundary when accumulation rates doubled to ~100 m/Myr. Site U1418 contains an expanded middle to late Pleistocene sedimentary record that also includes significant increases in sediment accumulation from ~400 m/Myr in the middle Pleistocene to >1200 m/Myr in the late Pleistocene. Slope Site U1421 and shelf Site U1420, proximal to or overridden by the Bering Glacier during glaciations, provided cores penetrating thick sequences of poorly sorted, glacigenic sediments ranging from mud to boulders. All five sites include the middle Pleistocene to Holocene and demonstrate exceptional accumulation rates. The sediments are dominantly glacigenic while containing evidence for direct interaction of tectonic and glacial erosion and sedimentation. Glacial ice, glacigenic sediment routing and glacial extents are driven by tectonic morphology at the orogen and individual thrust-sheet scales. Sediment accumulation, tempered by accommodation, perturbs fault patterns and drives positive feedback within the orogen to produce an extreme example of mass flux from orogen to deep-sea.

Effect of low temperatures on osserous and cartilaginous tissues

NASA Technical Reports Server (NTRS)

Pankov, Y. Y.; Babiychuk, G. A.; Malyshkina, S. V.; Zhigun, A. I.

1983-01-01

The use of extreme cold to treat tumoral afflictions of the extremities is discussed. Cryogenic methods and instruments are discussed, and the levels of accumulated knowledge in this area (as well as the areas still in question) are evaluated. The overall promise for cryogenic methods of treatment is acknowledged, and areas which need further development are noted.

Transcriptomic Profiling and Physiological Responses of Halophyte Kochia sieversiana Provide Insights into Salt Tolerance

PubMed Central

Zhao, Long; Yang, Zongze; Guo, Qiaobing; Mao, Shun; Li, Shaoqiang; Sun, Fasheng; Wang, Huan; Yang, Chunwu

2017-01-01

Halophytes are remarkable plants that can tolerate extremely high-salinity conditions, and have different salinity tolerance mechanisms from those of glycophytic plants. In this work, we investigated the mechanisms of salinity tolerance of an extreme halophyte, Kochia sieversiana (Pall.) C. A. M, using RNA sequencing and physiological tests. The results showed that moderate salinity stimulated the growth and water uptake of K. sieversiana and, even under 480-mM salinity condition, K. sieversiana maintained an extremely high water content. This high water content may be a specific adaptive strategy of K. sieversiana to high salinity. The physiological analysis indicated that increasing succulence and great accumulations of sodium, alanine, sucrose, and maltose may be favorable to the water uptake and osmotic regulation of K. sieversiana under high-salinity stress. Transcriptome data indicated that some aquaporin genes and potassium (K+) transporter genes may be important for water uptake and ion balance, respectively, while different members of those gene families were employed under low- and high-salinity stresses. In addition, several aquaporin genes were up-regulated in low- but not high-salinity stressed roots. The highly expressed aquaporin genes may allow low-salinity stressed K. sieversiana plants to uptake more water than control plants. The leaf K+/root K+ ratio was enhanced under low- but not high-salinity stress, which suggested that low salinity might promote K+ transport from the roots to the shoots. Hence, we speculated that low salinity might allow K. sieversiana to uptake more water and transport more K+ from roots to shoots, increasing the growth rate of K. sieversiana. PMID:29225608

Nitrate and amino acid availability affects glycine betaine and mycosporine-2-glycine in response to changes of salinity in a halotolerant cyanobacterium Aphanothece halophytica.

PubMed

Waditee-Sirisattha, Rungaroon; Kageyama, Hakuto; Fukaya, Minoru; Rai, Vandna; Takabe, Teruhiro

2015-12-01

A halotolerant cyanobacterium Aphanothece halophytica thrives in extreme salinity with accumulation of a potent osmoprotectant glycine betaine. Recently, this cyanobacterium was shown to accumulate sunscreen molecule mycosporine-2-glycine significantly at high salinity. In this study, we investigated effects of nitrate and amino acid provision on the accumulation of glycine betaine and mycosporine-2-glycine. With elevated nitrate concentrations at high salinity, intracellular levels of both metabolites were enhanced. Six-fold high nitrate concentration increased the relative amounts of glycine betaine and mycosporine-2-glycine to be 1.5 and 2.0 folds compared with control condition : Increased levels were time- and dose-dependent manner. Exogenous supply of glycine/serine at high salinity resulted in the similar trends as observed in excess nitrate experiment. Intracellular level of glycine betaine increased ∼1.6 folds with glycine/serine supplementation. These supplementations also caused the increased level of mycosporine-2-glycine, namely 1.4 and 2 folds by glycine and serine, respectively. The transcription of glycine betaine and mycosporine-2-glycine biosynthetic genes was strongly induced under high-nitrate-salt condition. These results suggest the dependence of glycine betaine and mycosporine-2-glycine productions on substrate availability, and the effect of nitrate was possibly associated with stimulation of osmoprotectant increment in this extremophile. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Tolerance to high soil temperature in foxtail millet (Setaria italica L.) is related to shoot and root growth and metabolism.

PubMed

Aidoo, Moses Kwame; Bdolach, Eyal; Fait, Aaron; Lazarovitch, Naftali; Rachmilevitch, Shimon

2016-09-01

Roots play important roles in regulating whole-plant carbon and water relations in response to extreme soil temperature. Three foxtail millet (Setaria italica L.) lines (448-Ames 21521, 463-P1391643 and 523-P1219619) were subjected to two different soil temperatures (28 and 38 °C). The gas exchange, chlorophyll fluorescence, root morphology and central metabolism of leaves and roots were studied at the grain-filling stage. High soil temperature (38 °C) significantly influenced the shoot transpiration, stomatal conductance, photosynthesis, root growth and metabolism of all lines. The root length and area were significantly reduced in lines 448 and 463 in response to the stress, while only a small non-specific reduction was observed in line 523 in response to the treatment. The shift of root metabolites in response to high soil temperature was also genotype specific. In response to high soil temperature, glutamate, proline and pyroglutamate were reduced in line 448, and alanine, aspartate, glycine, pyroglutamate, serine, threonine and valine were accumulated in line 463. In the roots of line 523, serine, threonine, valine, isomaltose, maltose, raffinose, malate and itaconate were accumulated. Root tolerance to high soil temperature was evident in line 523, in its roots growth potential, lower photosynthesis and stomatal conductance rates, and effective utilization and assimilation of membrane carbon and nitrogen, coupled with the accumulation of protective metabolites. Copyright © 2016. Published by Elsevier Masson SAS.

Projected changes in snowfall extremes and interannual variability of snowfall in the western United States

NASA Astrophysics Data System (ADS)

Lute, A. C.; Abatzoglou, J. T.; Hegewisch, K. C.

2015-02-01

Projected warming will have significant impacts on snowfall accumulation and melt, with implications for water availability and management in snow-dominated regions. Changes in snowfall extremes are confounded by projected increases in precipitation extremes. Downscaled climate projections from 20 global climate models were bias-corrected to montane Snowpack Telemetry stations across the western United States to assess mid-21st century changes in the mean and variability of annual snowfall water equivalent (SFE) and extreme snowfall events, defined by the 90th percentile of cumulative 3 day SFE amounts. Declines in annual SFE and number of snowfall days were projected for all stations. Changes in the magnitude of snowfall event quantiles were sensitive to historical winter temperature. At climatologically cooler locations, such as in the Rocky Mountains, changes in the magnitude of snowfall events mirrored changes in the distribution of precipitation events, with increases in extremes and less change in more moderate events. By contrast, declines in snowfall event magnitudes were found for all quantiles in warmer locations. Common to both warmer and colder sites was a relative increase in the magnitude of snowfall extremes compared to annual SFE and a larger fraction of annual SFE from snowfall extremes. The coefficient of variation of annual SFE increased up to 80% in warmer montane regions due to projected declines in snowfall days and the increased contribution of snowfall extremes to annual SFE. In addition to declines in mean annual SFE, more frequent low-snowfall years and less frequent high-snowfall years were projected for every station.

The Impacts of Atmospheric Rivers on California's Extreme Precipitation

NASA Astrophysics Data System (ADS)

Asgari Lamjiri, M.; Dettinger, M. D.; Ralph, M.

2017-12-01

Atmospheric rivers (ARs) are long, narrow corridors of enhanced water vapor transport that are typically associated with extratropical cyclones. ARs can be beneficial and replenish water resources, be hazardous and cause damaging floods, or have a combination of hazardous and beneficial impacts. Thus, understanding hydrologic impacts of ARs can help to improve water reservoir management and enhance flood risk mitigation, especially in California where there is extremely large year-to-year variability in annual precipitation accumulations. At the continental scale, gridded hourly precipitation observations are used in this study to identify unique characteristics of precipitation events impacting the US west coast compared to other regions in the US; precipitation events are defined here as continuous periods of precipitation with at least 5 mm of accumulated precipitation. It is shown that on average, the US west coast receives the largest precipitation totals across the US; these extreme precipitation events are largely associated with the most persistent ARs. Within California, hourly precipitation observations from 200 sites are being analyzed to better understand distinct categories of ARs that dictate extreme precipitation in different regions of California. It is found that, on average, the north coast, northern Sierra, and the Transverse Ranges experience the largest precipitation events; north coast and northern Sierra precipitation events tend to be longer, whereas the Transverse Ranges generally experience higher maximum and event-averaged intensities. ARs contribute significantly to extreme precipitation events in all regions of California, particularly the north coast, northern Sierra, and the Transverse Ranges. ARs associated with extreme precipitation events across California are significantly more persistent and have higher integrated vapor transport intensities than those associated with non-extreme events. Composites of characteristics of ARs which yield extreme precipitation events in different regions of California are studied to categorize the most impactful ARs in each region.

Chemical speciation and bioavailability of Cu(II). Study of the ionic copper(II) and bis(glycinate)-copper(II) accumulation by Lemna species

DOE Office of Scientific and Technical Information (OSTI.GOV)

Benda, F.; Kouba, J.

1991-03-01

In this paper, the authors examined the accumulation of copper(II) in, and its toxic effect on, duckweed, a plant which exhibits extremely high concentration factors. The effect of copper(II) was investigated by adding it to the minimal medium in two forms: CuSO{sub 4} and (Cu(Gly){sub 2}). The neutral (2:1) tetracoordinated bis(glycinate)-copper(II) complex is constituted by two five-membered rings bonded to the central copper atom with the cis configuration. This complex was chosen to model the function of a neutral species (eliminating the charge effect) involving a nontoxic ligand, for which - in contrast to the hydrated Cu{sup 2+} species -more » direct permeation through the cell wall is conceivable.« less

Determination of trunk streams via using flow accumulation values

NASA Astrophysics Data System (ADS)

Farek, Vladimir

2013-04-01

There is often a problem, with schematisation of catchments and a channel networks in a broken relief like sandstone landscape (with high vertical segmentation, narrow valley lines, crags, sheer rocks, endorheic hollows etc.). Usual hydrological parameters (subcatchment areas, altitude of highest point of subcatchment, water discharge), which are mostly used for determination of trunk stream upstream the junction, are frequently not utilizable very well in this kind of relief. We found, that for small, relatively homogeneous catchments (within the meaning of land-use, geological subsurface, anthropogenic influence etc.), which are extremely shaped, the value called "flow accumulation" (FA) could be very useful. This value gives the number of cells of the Digital Elevation Model (DEM) grid, which are drained to each cell of the catchment. We can predict that the stream channel with higher values of flow accumulation represents the main stream. There are three crucial issues with this theory. At first it is necessary to find the most suitable algorithm for calculation flow accumulation in a broken relief. Various algorithms could have complications with correct flow routing (representation of divergent or convergent character of the flow), or with keeping the flow paths uninterrupted. Relief with high curvature changes (alternating concave/convex shapes, high steepness changes) causes interrupting of flow lines in many algorithms used for hydrological computing. Second - set down limits of this theory (e.g. the size and character of a surveyed catchment). Third - verify this theory in reality. We tested this theory on sandstone landscape of National park Czech Switzerland. The main data source were high-resolution LIDAR (Light Detection and Ranging) DEM snapshots of surveyed area. This data comes from TU Dresden project called Genesis (Geoinformation Networks For The Cross- Border National Park Region Saxon- Bohemian Switzerland). In order to solve these issues GIS applications (e. g. GIS GRASS and its hydrological modules like r.terraflow, r.watershed, r.flow etc.) are very useful. Key words: channel network, flow accumulation, Digital Elevation Model, LIDAR, broken relief, GIS GRASS

A Novel Pathway for Triacylglycerol Biosynthesis Is Responsible for the Accumulation of Massive Quantities of Glycerolipids in the Surface Wax of Bayberry (Myrica pensylvanica) Fruit[OPEN

PubMed Central

Ohlrogge, John B.

2016-01-01

Bayberry (Myrica pensylvanica) fruits synthesize an extremely thick and unusual layer of crystalline surface wax that accumulates to 32% of fruit dry weight, the highest reported surface lipid accumulation in plants. The composition is also striking, consisting of completely saturated triacylglycerol, diacylglycerol, and monoacylglycerol with palmitate and myristate acyl chains. To gain insight into the unique properties of Bayberry wax synthesis, we examined the chemical and morphological development of the wax layer, monitored wax biosynthesis through [14C]-radiolabeling, and sequenced the transcriptome. Radiolabeling identified sn-2 monoacylglycerol as an initial glycerolipid intermediate. The kinetics of [14C]-DAG and [14C]-TAG accumulation and the regiospecificity of their [14C]-acyl chains indicated distinct pools of acyl donors and that final TAG assembly occurs outside of cells. The most highly expressed lipid-related genes were associated with production of cutin, whereas transcripts for conventional TAG synthesis were >50-fold less abundant. The biochemical and expression data together indicate that Bayberry surface glycerolipids are synthesized by a pathway for TAG synthesis that is related to cutin biosynthesis. The combination of a unique surface wax and massive accumulation may aid understanding of how plants produce and secrete non-membrane glycerolipids and also how to engineer alternative pathways for lipid production in non-seeds. PMID:26744217

Late Embryogenesis Abundant (LEA) proteins in legumes

PubMed Central

Battaglia, Marina; Covarrubias, Alejandra A.

2013-01-01

Plants are exposed to different external conditions that affect growth, development, and productivity. Water deficit is one of these adverse conditions caused by drought, salinity, and extreme temperatures. Plants have developed different responses to prevent, ameliorate or repair the damage inflicted by these stressful environments. One of these responses is the activation of a set of genes encoding a group of hydrophilic proteins that typically accumulate to high levels during seed dehydration, at the last stage of embryogenesis, hence named Late Embryogenesis Abundant (LEA) proteins. LEA proteins also accumulate in response to water limitation in vegetative tissues, and have been classified in seven groups based on their amino acid sequence similarity and on the presence of distinctive conserved motifs. These proteins are widely distributed in the plant kingdom, from ferns to angiosperms, suggesting a relevant role in the plant response to this unfavorable environmental condition. In this review, we analyzed the LEA proteins from those legumes whose complete genomes have been sequenced such as Phaseolus vulgaris, Glycine max, Medicago truncatula, Lotus japonicus, Cajanus cajan, and Cicer arietinum. Considering their distinctive motifs, LEA proteins from the different groups were identified, and their sequence analysis allowed the recognition of novel legume specific motifs. Moreover, we compile their transcript accumulation patterns based on publicly available data. In spite of the limited information on these proteins in legumes, the analysis and data compiled here confirm the high correlation between their accumulation and water deficit, reinforcing their functional relevance under this detrimental conditions. PMID:23805145

Tolerance to cadmium in plants: the special case of hyperaccumulators.

PubMed

Verbruggen, Nathalie; Juraniec, Michal; Baliardini, Cecilia; Meyer, Claire-Lise

2013-08-01

On sols highly polluted by trace metallic elements the majority of plant species are excluders, limiting the entry and the root to shoot translocation of trace metals. However a rare class of plants called hyperaccumulators possess remarkable adaptation because those plants combine extremely high tolerance degrees and foliar accumulation of trace elements. Hyperaccumulators have recently gained considerable interest, because of their potential use in phytoremediation, phytomining and biofortification. On a more fundamental point of view hyperaccumulators of trace metals are case studies to understand metal homeostasis and detoxification mechanisms. Hyperaccumulation of trace metals usually depends on the enhancement of at least four processes, which are the absorption from the soil, the loading in the xylem in the roots and the unloading from the xylem in the leaves and the detoxification in the shoot. Cadmium is one of the most toxic trace metallic elements for living organisms and its accumulation in the environment is recognized as a worldwide concern. To date, only nine species have been recognized as Cd hyperaccumulators that is to say able to tolerate and accumulate more than 0.01 % Cd in shoot dry biomass. Among these species, four belong to the Brassicaceae family with Arabidopsis halleri and Noccaea caerulescens being considered as models. An update of our knowledge on the evolution of hyperaccumulators will be presented here.

Sedimentation and belowground carbon accumulation rates in mangrove forests that differ in diversity and land use: a tale of two mangroves

Treesearch

Richard A. MacKenzie; Patra B. Foulk; J. Val Klump; Kimberly Weckerly; Joko Purbospito; Daniel Murdiyarso; Daniel C. Donato; Vien Ngoc Nam

2016-01-01

Increased sea level is the climate change effect expected to have the greatest impact on mangrove forest survival. Mangroves have survived extreme fluctuations in sea level in the past through sedimentation and belowground carbon (C) accumulation, yet it is unclear what factors may influence these two parameters. We measured sedimentation, vertical accretion, and...

Understory Herbicide as a Treatment For Reducing Hazardous Fuels and Extreme Fire Behavior in Slash Pine Plantations

Treesearch

Patrick H. Brose; Dale Wade

2002-01-01

The 1998 wildfires in Florida sparked a serious debate about the accumulation of hazardous forest fuels and the merits of prescribed fire and alternatives for mitigating that problem. One such alternative is application of understory herbicides and anecdotal evidence suggests they may either exacerbate or lessen the fuel accumulation problem. In 1998, a study was...

Are opthalmic hydrophobic coatings useful for astronomical optics?

NASA Astrophysics Data System (ADS)

Schwab, Christian; Phillips, Andrew C.

2010-07-01

Astronomical optics are often exposed to moisture and dust in observatory environments, which frequently compromises their high-performance coatings. Suitable protective layers to resist dust and moisture accumulation would be extremely advantageous, but have received scant attention thus far. Hydrophobic and scratch-resistant coatings, developed primarily for opthalmic use, exhibit several attractive properties for astronomical optics. We examine the properties of one such coating and its applicability to astronomical mirrors and lenses. This includes efficiency of dust removal, abrasion resistance, moisture resistance, ease of stripping, and transmission across a wide wavelength range.

Estimating the impact of extreme climatic events on riverine sediment transport: new tools and methods

NASA Astrophysics Data System (ADS)

Lajeunesse, E.; Delacourt, C.; Allemand, P.; Limare, A.; Dessert, C.; Ammann, J.; Grandjean, P.

2010-12-01

A series of recent works have underlined that the flux of material exported outside of a watershed is dramatically increased during extreme climatic events, such as storms, tropical cyclones and hurricanes [Dadson et al., 2003 and 2004; Hilton et al., 2008]. Indeed the exceptionally high rainfall rates reached during these events trigger runoff and landsliding which destabilize slopes and accumulate a significant amount of sediments in flooded rivers. This observation raises the question of the control that extreme climatic events might exert on the denudation rate and the morphology of watersheds. Addressing this questions requires to measure sediment transport in flooded rivers. However most conventional sediment monitoring technics rely on manned operated measurements which cannot be performed during extreme climatic events. Monitoring riverine sediment transport during extreme climatic events remains therefore a challenging issue because of the lack of instruments and methodologies adapted to such extreme conditions. In this paper, we present a new methodology aimed at estimating the impact of extreme events on sediment transport in rivers. Our approach relies on the development of two instruments. The first one is an in-situ optical instrument, based on a LISST-25X sensor, capable of measuring both the water level and the concentration of suspended matter in rivers with a time step going from one measurement every hour at low flow to one measurement every 2 minutes during a flood. The second instrument is a remote controlled drone helicopter used to acquire high resolution stereophotogrammetric images of river beds used to compute DEMs and to estimate how flash floods impact the granulometry and the morphology of the river. These two instruments were developed and tested during a 1.5 years field survey performed from june 2007 to january 2009 on the Capesterre river located on Basse-Terre island (Guadeloupe archipelago, Lesser Antilles Arc).

Reconstruction of the Paleoenvironment of the Early Cambrian Yurtus Black Shale in the Tarim Basin, Northwestern China, and Its Control on Organic Matter Accumulation

NASA Astrophysics Data System (ADS)

Li, J.; Ding, W.; Dong, L.

2017-12-01

The black shale in the early Cambrian Yurtus Formation (>521 Ma) in the Tarim basin, northwestern China, is characterized by its high TOC value (up to 16%) andgreat lateral continuity. It has been proven to be high-quality hydrocarbon source rocks. Abundant phytoplanktons and small shelly fossils have been reported from the lower Yurtus chert. However, recent biomarker discovery of aryl isoprenoid hydrocarbons suggests the existence of green sulfur bacteria, which indicates that the water column was stratified and the photic zone was prevailingly euxinic. These seemingly contradictory observations hamper our further understanding of the paleoenvironment in which the Yurtus shale was deposited and its control on the accumulation of organic matter. In this study, we systematically collected samples from the Yurtus Formation at the Kungaikuotan Section, and measured the organic carbon and nitrogen isotopic compositions and the content of trace element Barium (Ba). The strong negative excursions of nitrogen isotope ( -13‰) in the lower and upper parts of the Yurtus Formation are likely attributed to the biological activity of green and purple sulfur bacteria, which is consistent with our organic carbon isotope data as well as previous biomarker discovery. As green sulfur bacteria can only live in euxinic photic zone, it may indicate that the water column above this euxinic zone contains prolific organic matters which consume all the dissolved oxidants in surface ocean. It is well accepted that Ba flux can be used as an indicator for surface ocean primary productivity. Significant increase of barium content (from <100 to 2000 ppm) is observed at the same horizon as where the negative excursion of δ15Norg occurs, suggesting the substantive organic matter in the early Cambrian surface ocean mainly result from extremely high primary productivity. The abundant phytoplankton fossil record from this time period also supports this interpretation. In summary, high TOC in the Yurtus shale may derive from the extremely high primary productivity of phytoplanktons. Organic matter consumes all the dissolved oxidants in the water and generates the euxinic zone, which facilitates the accumulation and preservation of the surplus organic matter. This study also shed light on the ecology of the surface ocean before Cambrian Explosion.

The Influence of Coral Reef Benthic Condition on Associated Fish Assemblages

PubMed Central

Chong-Seng, Karen M.; Mannering, Thomas D.; Pratchett, Morgan S.; Bellwood, David R.; Graham, Nicholas A. J.

2012-01-01

Accumulative disturbances can erode a coral reef’s resilience, often leading to replacement of scleractinian corals by macroalgae or other non-coral organisms. These degraded reef systems have been mostly described based on changes in the composition of the reef benthos, and there is little understanding of how such changes are influenced by, and in turn influence, other components of the reef ecosystem. This study investigated the spatial variation in benthic communities on fringing reefs around the inner Seychelles islands. Specifically, relationships between benthic composition and the underlying substrata, as well as the associated fish assemblages were assessed. High variability in benthic composition was found among reefs, with a gradient from high coral cover (up to 58%) and high structural complexity to high macroalgae cover (up to 95%) and low structural complexity at the extremes. This gradient was associated with declining species richness of fishes, reduced diversity of fish functional groups, and lower abundance of corallivorous fishes. There were no reciprocal increases in herbivorous fish abundances, and relationships with other fish functional groups and total fish abundance were weak. Reefs grouping at the extremes of complex coral habitats or low-complexity macroalgal habitats displayed markedly different fish communities, with only two species of benthic invertebrate feeding fishes in greater abundance in the macroalgal habitat. These results have negative implications for the continuation of many coral reef ecosystem processes and services if more reefs shift to extreme degraded conditions dominated by macroalgae. PMID:22870294

The influence of coral reef benthic condition on associated fish assemblages.

PubMed

Chong-Seng, Karen M; Mannering, Thomas D; Pratchett, Morgan S; Bellwood, David R; Graham, Nicholas A J

2012-01-01

Accumulative disturbances can erode a coral reef's resilience, often leading to replacement of scleractinian corals by macroalgae or other non-coral organisms. These degraded reef systems have been mostly described based on changes in the composition of the reef benthos, and there is little understanding of how such changes are influenced by, and in turn influence, other components of the reef ecosystem. This study investigated the spatial variation in benthic communities on fringing reefs around the inner Seychelles islands. Specifically, relationships between benthic composition and the underlying substrata, as well as the associated fish assemblages were assessed. High variability in benthic composition was found among reefs, with a gradient from high coral cover (up to 58%) and high structural complexity to high macroalgae cover (up to 95%) and low structural complexity at the extremes. This gradient was associated with declining species richness of fishes, reduced diversity of fish functional groups, and lower abundance of corallivorous fishes. There were no reciprocal increases in herbivorous fish abundances, and relationships with other fish functional groups and total fish abundance were weak. Reefs grouping at the extremes of complex coral habitats or low-complexity macroalgal habitats displayed markedly different fish communities, with only two species of benthic invertebrate feeding fishes in greater abundance in the macroalgal habitat. These results have negative implications for the continuation of many coral reef ecosystem processes and services if more reefs shift to extreme degraded conditions dominated by macroalgae.

Experimental station for ultrafast extreme ultraviolet spectroscopy for non-equilibrium dynamics in warm dense matter

NASA Astrophysics Data System (ADS)

Lee, Jong-won; Geng, Xiaotao; Jung, Jae Hyung; Cho, Min Sang; Yang, Seong Hyeok; Jo, Jawon; Lee, Chang-lyoul; Cho, Byoung Ick; Kim, Dong-Eon

2018-07-01

Recent interest in highly excited matter generated by intense femtosecond laser pulses has led to experimental methods that directly investigate ultrafast non-equilibrium electronic and structural dynamics. We present a tabletop experimental station for the extreme ultraviolet (EUV) spectroscopy used to trace L-edge dynamics in warm dense aluminum with a temporal resolution of a hundred femtoseconds. The system consists of the EUV probe generation part via a high-order harmonic generation process of femtosecond laser pulses with atomic clusters, a beamline with high-throughput optics and a sample-refreshment system of nano-foils utilizing the full repetition rate of the probe, and a flat-field EUV spectrograph. With the accumulation of an order of a hundred shots, a clear observation of the change in the aluminum L-shell absorption was achieved with a temporal resolution of 90 fs in a 600-fs window. The signature of a non-equilibrium electron distribution over a 10-eV range and its evolution to a 1-eV Fermi distribution are observed. This demonstrates the capability of this apparatus to capture the non-equilibrium electron-hole dynamics in highly excited warm dense matter conditions.

Packaging and delivery of chemical weapons: a defensive trojan horse stratagem in chromodorid nudibranchs.

PubMed

Carbone, Marianna; Gavagnin, Margherita; Haber, Markus; Guo, Yue-Wei; Fontana, Angelo; Manzo, Emiliano; Genta-Jouve, Gregory; Tsoukatou, Maria; Rudman, William B; Cimino, Guido; Ghiselin, Michael T; Mollo, Ernesto

2013-01-01

Storage of secondary metabolites with a putative defensive role occurs in the so-called mantle dermal formations (MDFs) that are located in the more exposed parts of the body of most and very likely all members of an entire family of marine mollusks, the chromodorid nudibranchs (Gastropoda: Opisthobranchia). Given that these structures usually lack a duct system, the mechanism for exudation of their contents remains unclear, as does their adaptive significance. One possible explanation could be that they are adapted so as to be preferentially attacked by predators. The nudibranchs might offer packages containing highly repugnant chemicals along with parts of their bodies to the predators, as a defensive variant of the strategic theme of the Trojan horse. We detected, by quantitative (1)H-NMR, extremely high local concentrations of secondary metabolites in the MDFs of six species belonging to five chromodorid genera. The compounds were purified by chromatographic methods and subsequently evaluated for their feeding deterrent properties, obtaining dose-response curves. We found that only distasteful compounds are accumulated in the reservoirs at concentrations that far exceed the values corresponding to maximum deterrent activity in the feeding assays. Other basic evidence, both field and experimental, has been acquired to elucidate the kind of damage that the predators can produce on both the nudibranchs' mantles and the MDFs. As a result of a long evolutionary process that has progressively led to the accumulation of defensive chemical weapons in localized anatomical structures, the extant chromodorid nudibranchs remain in place when molested, retracting respiratory and chemosensory organs, but offering readily accessible parts of their body to predators. When these parts are masticated or wounded by predators, breakage of the MDFs results in the release of distasteful compounds at extremely high concentration in a way that maximizes their repugnant impact.

A quarter century of biomonitoring atmospheric pollution in the Czech Republic.

PubMed

Suchara, Ivan; Sucharová, Julie; Holá, Marie

2017-05-01

The Czech Republic (CZ) had extremely high emissions and atmospheric deposition of pollutants in the second half of the 1980s. Since the beginning of the 1990s, moss, spruce bark and forest floor humus have been used as bioindicators of air quality. In the first half of the 1990s, seven larger areas were found to be affected by high atmospheric deposition loads. Six of these "hot spots" were caused by industrial pollution sources, mainly situated in coal basins in the NW and NE part of the country, and one large area in the SE was affected by increased deposition loads of eroded soil particles. After restructuring of industry in CZ, these hot spots were substantially reduced or even disappeared between 1995 and 2000. Since 2000, only two larger areas with slightly increased levels of industrial pollutant deposition and a larger area affected by soil dust have repeatedly been identified by biomonitoring. The distribution of lead isotope ratios in moss showed the main deposition zones around important emission sources. Very high SO 2 emissions led to extreme acidity of spruce bark extracts (pH of about 2.3) at the end of the 1980s. The rate of increasing bark pH was strikingly similar to the rate of recovery of acid wet deposition measured at forest stations in CZ. By about 2005, when the median pH value in bark increased to about 3.2, the re-colonisation of trees by several epiphyte lichen species was observed throughout CZ. An increase in the accumulation of Chernobyl-derived 137 Cs in bark was detected at about ten sites affected by precipitation during the time when radioactive plumes crossed CZ (1986). Accumulated deposition loads in forest floor humus corresponded to the position of the moss and bark hot spots.

Future intensification of hydro-meteorological extremes: downscaling using the weather research and forecasting model

NASA Astrophysics Data System (ADS)

El-Samra, R.; Bou-Zeid, E.; Bangalath, H. K.; Stenchikov, G.; El-Fadel, M.

2017-12-01

A set of ten downscaling simulations at high spatial resolution (3 km horizontally) were performed using the Weather Research and Forecasting (WRF) model to generate future climate projections of annual and seasonal temperature and precipitation changes over the Eastern Mediterranean (with a focus on Lebanon). The model was driven with the High Resolution Atmospheric Model (HiRAM), running over the whole globe at a resolution of 25 km, under the conditions of two Representative Concentration Pathways (RCP) (4.5 and 8.5). Each downscaling simulation spanned one year. Two past years (2003 and 2008), also forced by HiRAM without data assimilation, were simulated to evaluate the model's ability to capture the cold and wet (2003) and hot and dry (2008) extremes. The downscaled data were in the range of recent observed climatic variability, and therefore corrected for the cold bias of HiRAM. Eight future years were then selected based on an anomaly score that relies on the mean annual temperature and accumulated precipitation to identify the worst year per decade from a water resources perspective. One hot and dry year per decade, from 2011 to 2050, and per scenario was simulated and compared to the historic 2008 reference. The results indicate that hot and dry future extreme years will be exacerbated and the study area might be exposed to a significant decrease in annual precipitation (rain and snow), reaching up to 30% relative to the current extreme conditions.

[Temporal and spatial change of climate resources and meteorological disasters under climate change during winter crop growing season in Guangdong Province, China.

PubMed

Wang, Hua; Chen, Hui Hua; Tang, Li Sheng; Wang, Juan Huai; Tang, Hai Yan

2018-01-01

Trend analysis method was applied to analyze the general variation characteristics of the climate resources and meteorological disasters of growing season of the winter planting in Guangdong before (1961-1996) and after climate warming (1997-2015). Percentile method was employed to determine thresholds for extreme cold and drought in major planting regions, and the characteristics of extreme disasters since climate warming were analyzed. The results showed that, by comparing 1997-2015 with 1961-1996, the heat value in winter growing season increased significantly. The belt with a higher heat value, where the average temperature was ≥15 ℃ and accumulated temperature was ≥2200 ℃·d, covered the main winter production regions as Shaoguan, Zhanjiang, Maoming, Huizhou, Meizhou and Guangzhou. Meanwhile, the precipitation witnessed a slight increase. The regions with precipitations of 250-350 mm included Zhanjiang, Maoming, Huizhou, Guangzhou and Meizhou. Chilling injury in the winter planting season in the regions decreased, the belt with an accumulated chilling of <2 ℃·d covered the major geographic parts of the involved regions as Zhanjiang, Maoming, Guangzhou and Huizhou; and the belt with an accumulated chilling of 8-16 ℃·d covered the major geographic parts of Shaoguan and Meizhou. Meanwhile, the drought days decreased, the belt with drought days ≥50 included the major geographic parts of Zhanjiang, Maoming, Huizhou, Guangzhou and the belt with drought days <50 included the major geographic parts of Shaoguan. The typical case of the extreme disasters showed that the extreme chilling injury and drought in the main producing regions should not be overlooked. Maoming, Huizhou and Meizhou were at higher risk of extreme chilling injury, followed by Shaoguan and Guangzhou. Zhanjiang and Maoming faced the highest risk of extreme drought, Huizhou and Guangzhou took the second place, Shaoguan and Meizhou went last. During 1997-2015, the heat of winter season increased significantly, the trend of chilling and drought decreased, however, the extreme disasters occurred frequently and the risks were higher in winter production areas. It was suggested that the winter planting should be closely integrated with climate resources and the occurrence law of meteorological disasters in growing season.

Evaluation of High-Resolution Precipitation Estimates from Satellites during July 2012 Beijing Flood Event Using Dense Rain Gauge Observations

PubMed Central

Chen, Sheng; Liu, Huijuan; You, Yalei; Mullens, Esther; Hu, Junjun; Yuan, Ye; Huang, Mengyu; He, Li; Luo, Yongming; Zeng, Xingji; Tang, Guoqiang; Hong, Yang

2014-01-01

Satellite-based precipitation estimates products, CMORPH and PERSIANN-CCS, were evaluated with a dense rain gauge network over Beijing and adjacent regions for an extremely heavy precipitation event on July 21 2012. CMORPH and PEERSIANN-CSS misplaced the region of greatest rainfall accumulation, and failed to capture the spatial pattern of precipitation, evidenced by a low spatial correlation coefficient (CC). CMORPH overestimated the daily accumulated rainfall by 22.84% while PERSIANN-CCS underestimated by 72.75%. In the rainfall center, both CMORPH and PERSIANN-CCS failed to capture the temporal variation of the rainfall, and underestimated rainfall amounts by 43.43% and 87.26%, respectively. Based on our results, caution should be exercised when using CMORPH and PERSIANN-CCS as input for monitoring and forecasting floods in Beijing urban areas, and the potential for landslides in the mountainous zones west and north of Beijing. PMID:24691358

Evaluation of high-resolution precipitation estimates from satellites during July 2012 Beijing flood event using dense rain gauge observations.

PubMed

Chen, Sheng; Liu, Huijuan; You, Yalei; Mullens, Esther; Hu, Junjun; Yuan, Ye; Huang, Mengyu; He, Li; Luo, Yongming; Zeng, Xingji; Tang, Guoqiang; Hong, Yang

2014-01-01

Satellite-based precipitation estimates products, CMORPH and PERSIANN-CCS, were evaluated with a dense rain gauge network over Beijing and adjacent regions for an extremely heavy precipitation event on July 21 2012. CMORPH and PEERSIANN-CSS misplaced the region of greatest rainfall accumulation, and failed to capture the spatial pattern of precipitation, evidenced by a low spatial correlation coefficient (CC). CMORPH overestimated the daily accumulated rainfall by 22.84% while PERSIANN-CCS underestimated by 72.75%. In the rainfall center, both CMORPH and PERSIANN-CCS failed to capture the temporal variation of the rainfall, and underestimated rainfall amounts by 43.43% and 87.26%, respectively. Based on our results, caution should be exercised when using CMORPH and PERSIANN-CCS as input for monitoring and forecasting floods in Beijing urban areas, and the potential for landslides in the mountainous zones west and north of Beijing.

Searching for new symmetry species of CH5+ - From lines to states without a model

NASA Astrophysics Data System (ADS)

Brackertz, Stefan; Schlemmer, Stephan; Asvany, Oskar

2017-12-01

CH5+ is a prototype of an extremely flexible molecule for which the quantum states have eluded an analytical description so far. Therefore, the reconstruction of its quantum states relies on methods as e.g. the search for accumulations of combination differences of rovibrational transitions. Using the available high resolution data of the Cologne laboratories [1], this reconstruction has been improved by using the properties of kernel density estimators as well as new combinatorial approaches to evaluate the found accumulations. Two new symmetry sets have been discovered, and the known ones extended, with 1063 of the 2897 measured lines assigned, which is a significant improvement over the 65 assignments of the previous work. This allowed us not only to reconstruct more parts of the ground state levels, but also of the vibrationally excited states of CH5+.

Specific lignin accumulation in granulated juice sacs of Citrus maxima.

PubMed

Wu, Jia-Ling; Pan, Teng-Fei; Guo, Zhi-Xiong; Pan, Dong-Ming

2014-12-17

Juice sac granulation occurring in pummelo fruits [Citrus maxima (Burm.) Merr.] is an undesirable trait, and the underlying mechanism remains unresolved. Previous studies have shown that lignin metabolism is closely associated with the process of juice sac granulation. Here, a method suitable for lignin isolation from pummelo tissues is established. Acetylated lignins from different pummelo tissues and cultivars were analyzed by HSQC NMR. The results showed that lignins in granulated juice sacs were characterized by an extremely high abundance of guaiacyl units (91.13-96.82%), in contrast to lignins from other tissues, including leaves, stems, and segment membranes. The abnormally accumulated lignins in granulated juice sacs were specific and mainly polymerized from coniferyl alcohol. No significant difference was found in lignin types among various cultivars. These findings indicated that the mechanism of juice sac granulation might be similar among various cultivars, although very different degrees of juice sac granulation can be observed.

Evidence for a photoprotective function for secondary carotenoids of snow algae

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bidigare, R.R.; Ondrusek, M.E.; Kennicutt, M.C. II

Snow algae occupy a unique habitat in high altitude and polar environments. These algae are often subject to extremes in nutrient availability, acidity, solar irradiance, desiccation, and ambient temperature. This report documents the accumulation of secondary carotenoids by snow algae in response to the availability of nitrogenous nutrients. Unusually large accumulations of astaxanthin esters in extra-chloroplastic lipid globules produce the characteristic red pigmentation typical of some snow algae (e.g., Chlamydomonas nivalis (Bauer) Wille). Consequently, these compounds greatly reduce the amount of light available for absorption by the light-harvesting pigment-protein complexes, thus potentially limiting photoinhibition and photodamage caused by intense solarmore » radiation. The esterification of astaxanthin with fatty acids represents a possible mechanism by which this chromophore can be concentrated within cytoplasmic globules to maximize its photoprotective efficiency. 53 refs., 2 figs., 4 tabs.« less

Near-infrared-fluorescence imaging of lymph nodes by using liposomally formulated indocyanine green derivatives.

PubMed

Toyota, Taro; Fujito, Hiromichi; Suganami, Akiko; Ouchi, Tomoki; Ooishi, Aki; Aoki, Akira; Onoue, Kazutaka; Muraki, Yutaka; Madono, Tomoyuki; Fujinami, Masanori; Tamura, Yutaka; Hayashi, Hideki

2014-01-15

Liposomally formulated indocyanine green (LP-ICG) has drawn much attention as a highly sensitive near-infrared (NIR)-fluorescence probe for tumors or lymph nodes in vivo. We synthesized ICG derivatives tagged with alkyl chains (ICG-Cn), and we examined NIR-fluorescence imaging for lymph nodes in the lower extremities of mice by using liposomally formulated ICG-Cn (LP-ICG-Cn) as well as conventional liposomally formulated ICG (LP-ICG) and ICG. Analysis with a noninvasive preclinical NIR-fluorescence imaging system revealed that LP-ICG-Cn accumulates in only the popliteal lymph node 1h after injection into the footpad, whereas LP-ICG and ICG accumulate in the popliteal lymph node and other organs like the liver. This result indicates that LP-ICG-Cn is a useful NIR-fluorescence probe for noninvasive in vivo bioimaging, especially for the sentinel lymph node. Copyright © 2013 Elsevier Ltd. All rights reserved.

[Response of indica rice spikelet differentiation and degeneration to air temperature and solar radiation of different sowing dates].

PubMed

Wang, Ya Liang; Zhang, Yu Ping; Xiang, Jing; Wang, Lei; Chen, Hui Zhe; Zhang, Yi Kai; Zhang, Wen Qian; Zhu, De Feng

2017-11-01

In this study, three rice varieties, including three-line hybrid indica rice Wuyou308 and Tianyouhuazhan, and inbred indica rice Huanghuazhan were used to investigate the effects of air temperature and solar radiation on rice growth duration and spikelet differentiation and degeneration. Ten sowing-date treatments were conducted in this field experiment. The results showed that the growth duration of three indica rice varieties were more sensitive to air temperature than to day-length. With average temperature increase of 1 ℃, panicle initiation advanced 1.5 days, but the panicle growth duration had no significant correlation with the temperature and day-length. The number of spikelets and differentiated spikelets revealed significant differences among different sowing dates. Increases in average temperature, maximum temperature, minimum temperature, effective accumulated temperature, temperature gap and the solar radiation benefited dry matter accumulation and spikelet differentiation of all varieties. With increases of effective accumulated temperature, diurnal temperature gap and solar radiation by 50 ℃, 1 ℃, 50 MJ·m -2 during panicle initiation stage, the number of differentiated spikelets increased 10.5, 14.3, 17.1 respectively. The rate of degenerated spikelets had a quadratic correlation with air temperature, extreme high and low temperature aggravated spikelets degeneration, and low temperature stress made worse effect than high temperature stress. The rate of spikelet degeneration dramatically rose with the temperature falling below the critical temperature, the critical effective accumulated temperature, daily average temperature, daily maximum temperature and minimum temperature during panicle initiation were 550-600 ℃, 24.0-26.0 ℃, 32.0-34.0 ℃, 21.0-23.0 ℃, respectively. In practice, the natural condition of appropriate high temperature, large diurnal temperature gap and strong solar radiation were conducive to spikelet differentiation, and hindered the spikelet degeneration.

The Elemental Composition of Demospongiae from the Red Sea, Gulf of Aqaba

PubMed Central

Mayzel, Boaz; Aizenberg, Joanna; Ilan, Micha

2014-01-01

Trace elements are vital for the growth and development of all organisms. Little is known about the elemental content and trace metal biology of Red Sea demosponges. This study establishes an initial database of sponge elemental content. It provides the necessary foundation for further research of the mechanisms used by sponges to regulate the uptake, accumulation, and storage of metals. The metal content of 16 common sponge species was determined using ICP measurements. A combination of statistical methods was used to determine the correlations between the metals and detect species with significantly high or low concentrations of these metals. Bioaccumulation factors were calculated to compare sponge metal content to local sediment. Theonella swinhoei contained an extremely high concentration of arsenic and barium, much higher (at least 200 times) than all other species and local sediment. Hyrtios erecta had significantly higher concentration of Al, Cr, Fe, Mn, Ti and V than all other species. This is due to sediment accumulation and inclusion in the skeleton fibers of this sponge species. Suberites clavatus was found to contain significantly higher concentration of Cd, Co, Ni and Zn than all other species and local sediment, indicating active accumulation of these metals. It also has the second highest Fe concentration, but without the comparably high concentrations of Al, Mn and Ti that are evident in H. erecta and in local sediment. These differences indicate active uptake and accumulation of Fe in S. clavatus, this was also noted in Niphates rowi. A significantly higher B concentration was found in Crella cyatophora compared to all other species. These results indicate specific roles of trace elements in certain sponge species that deserve further analysis. They also serve as a baseline to monitor the effects of anthropogenic disturbances on Eilat's coral reefs. PMID:24759635

Sedimentary condensation and authigenesis

NASA Astrophysics Data System (ADS)

Föllmi, Karl

2016-04-01

Most marine authigenic minerals form in sediments, which are subjected to condensation. Condensation processes lead to the formation of well individualized, extremely thin (< 1m) beds, which were accumulated during extremely long time periods (> 100ky), and which experienced authigenesis and the precipitation of glaucony, verdine, phosphate, iron and manganese oxyhydroxides, iron sulfide, carbonate and/or silica. They usually show complex internal stratigraphies, which result from an interplay of sediment accumulation, halts in sedimentation, sediment winnowing, erosion, reworking and bypass. They may include amalgamated faunas of different origin and age. Hardgrounds may be part of condensed beds and may embody strongly condensed beds by themselves. Sedimentary condensation is the result of a hydrodynamically active depositional regime, in which sediment accumulation, winnowing, erosion, reworking and bypass are processes, which alternate as a function of changes in the location and intensity of currents, and/or as the result of episodic high-energy events engendered by storms and gravity flow. Sedimentary condensation has been and still is a widespread phenomenon in past and present-day oceans. The present-day distribution of glaucony and verdine-rich sediments on shelves and upper slopes, phosphate-rich sediments and phosphorite on outer shelves and upper slopes, ferromanganese crusts on slopes, seamounts and submarine plateaus, and ferromanganese nodules on abyssal seafloors is a good indication of the importance of condensation processes today. In the past, we may add the occurrence of oolitic ironstone, carbonate hardgrounds, and eventually also silica layers in banded iron formations as indicators of the importance of condensation processes. Besides their economic value, condensed sediments are useful both as a carrier of geochemical proxies of paleoceanographic and paleoenvironmental change, as well as the product of episodes of paleoceanographic and paleoenvironmental change themselves.

The de-epoxidase and epoxidase reactions of Mantoniella squamata (Prasinophyceae) exhibit different substrate-specific reaction kinetics compared to spinach.

PubMed

Frommolt, R; Goss, R; Wilhelm, C

2001-07-01

In vivo the prasinophyceaen alga Mantoniella squamata Manton et Parke uses an incomplete violaxanthin (Vx) cycle, leading to a strong accumulation of antheraxanthin (Ax) under conditions of high light. Here, we show that this zeaxanthin (Zx)-depleted Vx/Ax cycle is caused by an extremely slow second de-epoxidation step from Ax to Zx, and a fast epoxidation from Ax back to Vx in the light. The rate constant of Ax epoxidation is 5 to 6 times higher than the rate constant of Zx formation, implying that Ax is efficiently converted back to Vx before it can be de-epoxidated to Zx. It is, however, only half the rate constant of the first de-epoxidation step from Vx to Ax, thus explaining the observed net accumulation of Ax during periods of strong illumination. When comparing the rate constant of the second de-epoxidation step in M. squamata with Zx formation in spinach (Spinacia oleracea L.) thylakoids, we find a 20-fold reduction in the reaction kinetics of the former. This extremely slow Ax de-epoxidation, which is also exhibited by the isolated Mantoniella violaxanthin de-epoxidase (VDE), is due to a reduced substrate affinity of M. squamata VDE for Ax compared with the VDE of higher plants. Mantoniella VDE, which has a similar Km value for Vx, shows a substantially increased Km for the substrate Ax in comparison with spinach VDE. Our results furthermore explain why Zx formation in Mantoniella cells can only be found at low pH values that represent the pH optimum of VDE. A pH of 5 blocks the epoxidation reaction and, consequently, leads to a slow but appreciable accumulation of Zx.

Coherent Structures and Extreme Events in Rotating Multiphase Turbulent Flows

NASA Astrophysics Data System (ADS)

Biferale, L.; Bonaccorso, F.; Mazzitelli, I. M.; van Hinsberg, M. A. T.; Lanotte, A. S.; Musacchio, S.; Perlekar, P.; Toschi, F.

2016-10-01

By using direct numerical simulations (DNS) at unprecedented resolution, we study turbulence under rotation in the presence of simultaneous direct and inverse cascades. The accumulation of energy at large scale leads to the formation of vertical coherent regions with high vorticity oriented along the rotation axis. By seeding the flow with millions of inertial particles, we quantify—for the first time—the effects of those coherent vertical structures on the preferential concentration of light and heavy particles. Furthermore, we quantitatively show that extreme fluctuations, leading to deviations from a normal-distributed statistics, result from the entangled interaction of the vertical structures with the turbulent background. Finally, we present the first-ever measurement of the relative importance between Stokes drag, Coriolis force, and centripetal force along the trajectories of inertial particles. We discover that vortical coherent structures lead to unexpected diffusion properties for heavy and light particles in the directions parallel and perpendicular to the rotation axis.

The pmr gene, encoding a Ca2+-ATPase, is required for calcium and manganese homeostasis and normal development of hyphae and conidia in Neurospora crassa.

PubMed

Bowman, Barry J; Abreu, Stephen; Johl, Jessica K; Bowman, Emma Jean

2012-11-01

The pmr gene is predicted to encode a Ca(2+)-ATPase in the secretory pathway. We examined two strains of Neurospora crassa that lacked PMR: the Δpmr strain, in which pmr was completely deleted, and pmr(RIP), in which the gene was extensively mutated. Both strains had identical, complex phenotypes. Compared to the wild type, these strains required high concentrations of calcium or manganese for optimal growth and had highly branched, slow-growing hyphae. They conidiated poorly, and the shape and size of the conidia were abnormal. Calcium accumulated in the Δpmr strains to only 20% of the wild-type level. High concentrations of MnCl(2) (1 to 5 mM) in growth medium partially suppressed the morphological defects but did not alter the defect in calcium accumulation. The Δpmr Δnca-2 double mutant (nca-2 encodes a Ca(2+)-ATPase in the plasma membrane) accumulated 8-fold more calcium than the wild type, and the morphology of the hyphae was more similar to that of wild-type hyphae. Previous experiments failed to show a function for nca-1, which encodes a SERCA-type Ca(2+)-ATPase in the endoplasmic reticulum (B. J. Bowman, S. Abreu, E. Margolles-Clark, M. Draskovic, and E. J. Bowman, Eukaryot. Cell 10:654-661, 2011). The pmr(RIP) Δnca-1 double mutant accumulated small amounts of calcium, like the Δpmr strain, but exhibited even more extreme morphological defects. Thus, PMR can apparently replace NCA-1 in the endoplasmic reticulum, but NCA-1 cannot replace PMR. The morphological defects in the Δpmr strain are likely caused, in part, by insufficient concentrations of calcium and manganese in the Golgi compartment; however, PMR is also needed to accumulate normal levels of calcium in the whole cell.

Seawater as the source of minor elements in black shales, phosphorites and other sedimentary rocks

USGS Publications Warehouse

Piper, D.Z.

1994-01-01

Many of the minor elements in seawater today have a concentration-depth profile similar to that of the biologically essential nutrients, NO-3 and PO3-4. They show a relative depletion in the photic zone and enrichment in the deep ocean. The difference between their surface- and deep-ocean values, normalized to the change in PO3-4, approaches the average of measured minor-element: P ratios in marine plankton, although individual analyses of the latter show extreme scatter for a variety of reasons. Despite this scatter in the minor-element analyses of plankton, agreement between the two sets of data shows unequivocally that an important marine flux of many minor elements through the ocean is in the form of biogenic matter, with a composition approaching that of plankton. This interpretation is further supported by sediment studies, particularly of sediments which accumulate in shelf-slope environments where biological productivity in the photic zone is exceptionally high and organic carbon contents of the underlying sediment elevated. The interelement relations observed for some of these sediments approach the average values of plankton. These same interelement relations are observed in many marine sedimentary rocks such as metalliferous black shales and phosphorites, rocks which have a high content of marine fractions (e.g., organic matter, apatite, biogenic silica and carbonates). Many previous studies of the geochemistry of these rocks have concluded that local hydrothermal activity, and/or seawater with an elemental content different from that of the modern ocean, was required to account for their minor-element contents. However, the similarity in several of the minor-element ratios in many of these formations to minor-element ratios in modern plankton demonstrates that these sedimentary rocks accumulated in environments whose marine chemistry was virtually identical to that seen on continental shelf-slopes, or in marginal seas, of the ocean today. The accumulation of the marine fraction of minor elements on these ancient sea floors was determined largely by the accumulation of organic matter, settling from the photic zone and with a composition of average plankton. A second marine fraction of minor elements in these rocks accumulated through precipitation and adsorption from seawater. The suite of elements in this fraction reflects redox conditions in the bottom water, as determined by bacterial respiration. For example, high Mn, high Cr+V and high Mo concentrations, above those which can be attributed to the accumulation of planktonic matter, characterize accumulation under bottom-water oxidizing, denitrifying and sulfate-reducing conditions, respectively. ?? 1994.

Quality‐control of an hourly rainfall dataset and climatology of extremes for the UK

PubMed Central

Lewis, Elizabeth; Chan, Steven C.; Fowler, Hayley J.

2016-01-01

ABSTRACT Sub‐daily rainfall extremes may be associated with flash flooding, particularly in urban areas but, compared with extremes on daily timescales, have been relatively little studied in many regions. This paper describes a new, hourly rainfall dataset for the UK based on ∼1600 rain gauges from three different data sources. This includes tipping bucket rain gauge data from the UK Environment Agency (EA), which has been collected for operational purposes, principally flood forecasting. Significant problems in the use of such data for the analysis of extreme events include the recording of accumulated totals, high frequency bucket tips, rain gauge recording errors and the non‐operation of gauges. Given the prospect of an intensification of short‐duration rainfall in a warming climate, the identification of such errors is essential if sub‐daily datasets are to be used to better understand extreme events. We therefore first describe a series of procedures developed to quality control this new dataset. We then analyse ∼380 gauges with near‐complete hourly records for 1992–2011 and map the seasonal climatology of intense rainfall based on UK hourly extremes using annual maxima, n‐largest events and fixed threshold approaches. We find that the highest frequencies and intensities of hourly extreme rainfall occur during summer when the usual orographically defined pattern of extreme rainfall is replaced by a weaker, north–south pattern. A strong diurnal cycle in hourly extremes, peaking in late afternoon to early evening, is also identified in summer and, for some areas, in spring. This likely reflects the different mechanisms that generate sub‐daily rainfall, with convection dominating during summer. The resulting quality‐controlled hourly rainfall dataset will provide considerable value in several contexts, including the development of standard, globally applicable quality‐control procedures for sub‐daily data, the validation of the new generation of very high‐resolution climate models and improved understanding of the drivers of extreme rainfall. PMID:28239235

ClimEx - Climate change and hydrological extreme events - risks and perspectives for water management in Bavaria and Québec

NASA Astrophysics Data System (ADS)

Ludwig, Ralf; Baese, Frank; Braun, Marco; Brietzke, Gilbert; Brissette, Francois; Frigon, Anne; Giguère, Michel; Komischke, Holger; Kranzlmueller, Dieter; Leduc, Martin; Martel, Jean-Luc; Ricard, Simon; Schmid, Josef; von Trentini, Fabian; Turcotte, Richard; Weismueller, Jens; Willkofer, Florian; Wood, Raul

2017-04-01

The recent accumulation of extreme hydrological events in Bavaria and Québec has stimulated scientific and also societal interest. In addition to the challenges of an improved prediction of such situations and the implications for the associated risk management, there is, as yet, no confirmed knowledge whether and how climate change contributes to the magnitude and frequency of hydrological extreme events and how regional water management could adapt to the corresponding risks. The ClimEx project (2015-2019) investigates the effects of climate change on the meteorological and hydrological extreme events and their implications for water management in Bavaria and Québec. High Performance Computing is employed to enable the complex simulations in a hydro-climatological model processing chain, resulting in a unique high-resolution and transient (1950-2100) dataset of climatological and meteorological forcing and hydrological response: (1) The climate module has developed a large ensemble of high resolution data (12km) of the CRCM5 RCM for Central Europe and North-Eastern North America, downscaled from 50 members of the CanESM2 GCM. The dataset is complemented by all available data from the Euro-CORDEX project to account for the assessment of both natural climate variability and climate change. The large ensemble with several thousand model years provides the potential to catch rare extreme events and thus improves the process understanding of extreme events with return periods of 1000+ years. (2) The hydrology module comprises process-based and spatially explicit model setups (e.g. WaSiM) for all major catchments in Bavaria and Southern Québec in high temporal (3h) and spatial (500m) resolution. The simulations form the basis for in depth analysis of hydrological extreme events based on the inputs from the large climate model dataset. The specific data situation enables to establish a new method for 'virtual perfect prediction', which assesses climate change impacts on flood risk and water resources management by identifying patterns in the data which reveal preferential triggers of hydrological extreme events. The presentation will highlight first results from the analysis of the large scale ClimEx model ensemble, showing the current and future ratio of natural variability and climate change impacts on meteorological extreme events. Selected data from the ensemble is used to drive a hydrological model experiment to illustrate the capacity to better determine the recurrence periods of hydrological extreme events under conditions of climate change. [The authors acknowledge funding for the project from the Bavarian State Ministry for the Environment and Consumer Protection].

An ice core record of net snow accumulation and seasonal snow chemistry at Mt. Waddington, southwest British Columbia, Canada

NASA Astrophysics Data System (ADS)

Neff, P. D.; Steig, E. J.; Clark, D. H.; McConnell, J. R.; Pettit, E. C.; Menounos, B.

2011-12-01

We recovered a 141 m ice core from Combatant Col (51.39°N, 125.22°W, 3000 m asl) on the flank of Mt. Waddington, southern Coast Mountains, British Columbia, Canada. Aerosols and other impurities in the ice show unambiguous seasonal variations, allowing for annual dating of the core. Clustered melt layers, originating from summer surface heating, also aid in the dating of the core. Seasonality in water stable isotopes is preserved throughout the record, showing little evidence of diffusion at depth, and serves as an independent verification of the timescale. The annual signal of deuterium excess is especially well preserved. The record of lead deposition in the core agrees with those of ice cores from Mt. Logan and from Greenland, with a sharp drop-off in concentration in the 1970s and early 1980s, further validating the timescales. Despite significant summertime melt at this mid-latitude site, these data collectively reveal a continuous and annually resolved 36-year record of snow accumulation. We derived an accumulation time series from the Mt. Waddington ice core, after correcting for ice flow. Years of anomalously high or low snow accumulation in the core correspond with extremes in precipitation data and geopotential height anomalies from reanalysis data that make physical sense. Specifically, anomalously high accumulation years at Mt. Waddington correlate with years where "Pineapple Express" atmospheric river events bring large amounts of moisture from the tropical Pacific to western North America. The Mt. Waddington accumulation record thus reflects regional-scale climate. These results demonstrate the potential of ice core records from temperate glaciers to provide meaningful paleoclimate information. A longer core to bedrock (250-300 m) at the Mt. Waddington site could yield ice with an age of several hundred to 1000 years.

Heavy metal contamination status of Japanese cranes (Grus japonensis) in east Hokkaido, Japan--extensive mercury pollution.

PubMed

Teraoka, Hiroki; Kumagai, Yoshihiro; Iwai, Hisae; Haraguchi, Kensaku; Ohba, Takashi; Nakai, Kunihiko; Satoh, Hiroshi; Sakamoto, Mineshi; Momose, Kunikazu; Masatomi, Hiroyuki; Hiraga, Takeo

2007-02-01

Japanese cranes (Grus japonensis) of eastern Hokkaido, Japan, and migrants between the Amur River basin and the eastern China-Korea Peninsula, live around fresh and brackish wetlands. Only a few thousand cranes are confirmed to exist in the world, so they are under threat of extinction. To understand the adverse effects of metal accumulation, we measured concentrations of three heavy metals in the liver, kidney, and muscle of 93 Japanese cranes from Hokkaido. The cranes were classified into six categories according to their sex and three life stages. Cadmium and mercury (Hg: total mercury) showed age-dependent but not sex-dependent accumulation in the liver and kidney. Twenty cranes showed 30 microg/g or higher levels of Hg in dry tissue and five adult cranes had more than 100 microg/g in their livers or kidneys. Cadmium concentrations were generally lower in all samples. Two adult cranes showed extremely high lead levels of more than 30 microg/g in their livers, suggesting lead poisoning. These results have highlighted the widespread and high levels of Hg pollution in Japanese cranes in Hokkaido, Japan.

Adaptation of Bacillus subtilis to Life at Extreme Potassium Limitation.

PubMed

Gundlach, Jan; Herzberg, Christina; Hertel, Dietrich; Thürmer, Andrea; Daniel, Rolf; Link, Hannes; Stülke, Jörg

2017-07-05

Potassium is the most abundant metal ion in every living cell. This ion is essential due to its requirement for the activity of the ribosome and many enzymes but also because of its role in buffering the negative charge of nucleic acids. As the external concentrations of potassium are usually low, efficient uptake and intracellular enrichment of the ion is necessary. The Gram-positive bacterium Bacillus subtilis possesses three transporters for potassium, KtrAB, KtrCD, and the recently discovered KimA. In the absence of the high-affinity transporters KtrAB and KimA, the bacteria were unable to grow at low potassium concentrations. However, we observed the appearance of suppressor mutants that were able to overcome the potassium limitation. All these suppressor mutations affected amino acid metabolism, particularly arginine biosynthesis. In the mutants, the intracellular levels of ornithine, citrulline, and arginine were strongly increased, suggesting that these amino acids can partially substitute for potassium. This was confirmed by the observation that the supplementation with positively charged amino acids allows growth of B. subtilis even at the extreme potassium limitation that the bacteria experience if no potassium is added to the medium. In addition, a second class of suppressor mutations allowed growth at extreme potassium limitation. These mutations result in increased expression of KtrAB, the potassium transporter with the highest affinity and therefore allow the acquisition and accumulation of the smallest amounts of potassium ions from the environment. IMPORTANCE Potassium is essential for every living cell as it is required for the activity for many enzymes and for maintaining the intracellular pH by buffering the negative charge of the nucleic acids. We have studied the adaptation of the soil bacterium Bacillus subtilis to life at low potassium concentrations. If the major high-affinity transporters are missing, the bacteria are unable to grow unless they acquire mutations that result in the accumulation of positively charged amino acids such as ornithine, citrulline, and arginine. Supplementation of the medium with these amino acids rescued growth even in the absence of externally added potassium. Moreover, these growth conditions, which the bacteria experience as an extreme potassium limitation, can be overcome by the acquisition of mutations that result in increased expression of the high-affinity potassium transporter KtrAB. Our results indicate that positively charged amino acids can partially take over the function of potassium. Copyright © 2017 Gundlach et al.

High-resolution and high-throughput multichannel Fourier transform spectrometer with two-dimensional interferogram warping compensation

NASA Astrophysics Data System (ADS)

Watanabe, A.; Furukawa, H.

2018-04-01

The resolution of multichannel Fourier transform (McFT) spectroscopy is insufficient for many applications despite its extreme advantage of high throughput. We propose an improved configuration to realise both performance using a two-dimensional area sensor. For the spectral resolution, we obtained the interferogram of a larger optical path difference by shifting the area sensor without altering any optical components. The non-linear phase error of the interferometer was successfully corrected using a phase-compensation calculation. Warping compensation was also applied to realise a higher throughput to accumulate the signal between vertical pixels. Our approach significantly improved the resolution and signal-to-noise ratio by factors of 1.7 and 34, respectively. This high-resolution and high-sensitivity McFT spectrometer will be useful for detecting weak light signals such as those in non-invasive diagnosis.

The accumulation of femtosecond laser radiation energy in crystals of lithium fluoride

NASA Astrophysics Data System (ADS)

Dresvyanskiy, V. P.; Glazunov, D. S.; Alekseev, S. V.; Losev, V. F.; Chadraa, B.; Bukhtsooj, O.; Baasankhuu, N.; Zandan, B.; Martynovich, E. F.

2015-12-01

We present the results of studies of energy accumulation during the non-destructive interaction of extremely intense near infrared laser radiation with model wide band gap dielectric crystals of lithium fluoride, when the intensity of pulses is sufficient for effective highly nonlinear absorption of light and for the excitation of the electron subsystem of matter and the energy of pulses is still not sufficient for significant heating, evaporation, laser breakdown or other destruction to occur. We studied the emission of energy in the form of light sum of thermally stimulated luminescence accumulated under conditions of self-focusing and multiple filamentation of femtosecond laser radiation. It was established that it's the F2 and F3+ color centers and supplementary to them centers of interstitial type which accumulate energy under the action of a single femtosecond laser pulses. When irradiated by series of pulses the F3, F3- and F4 centers additionally appear. F2 centers are the main centers of emission in the process of thermally stimulated luminescence of accumulated energy. The interstitial fluoride ions (I-centers) are the kinetic particles. They split off from the X3- centers in the result of thermal decomposition of latter on the I-centers and molecules X20. I-centers recombine with F3+ centers and form F2 centers in excited state. The latter produce the characteristic emission spectrum emitted in the form of thermally stimulated luminescence.

Cyanobacteria and microalgae: a renewable source of bioactive compounds and other chemicals.

PubMed

Encarnação, Telma; Pais, Alberto A C C; Campos, Maria G; Burrows, Hugh D

2015-01-01

Microalgae and cyanobacteria are rich sources of many valuable compounds, including important bioactive and biotechnologically relevant chemicals. Their enormous biodiversity, and the consequent variability in the respective biochemical composition, make microalgae cultivations a promising resource for many novel chemically and biologically active molecules and compounds of high commercial value such as lipids and dyes. The nature of the chemicals produced can be manipulated by changing the cultivation media and conditions. Algae are extremely versatile because they can be adapted to a variety of cell culture conditions. They do not require arable land, can be cultivated on saline water and wastewaters, and require much less water than plants. They possess an extremely high growth rate making these microorganisms very attractive for use in biofuel production--some species of algae can achieve around 100 times more oil than oil seeds. In addition, microalgae and cyanobacteria can accumulate various biotoxins and can contribute to mitigate greenhouse gases since they produce biomass through carbon dioxide fixation. In this review, we provide an overview of the application of microalgae in the production of bioactive and other chemicals.

Best of both worlds: simultaneous high-light and shade-tolerance adaptations within individual leaves of the living stone Lithops aucampiae.

PubMed

Field, Katie J; George, Rachel; Fearn, Brian; Quick, W Paul; Davey, Matthew P

2013-01-01

"Living stones" (Lithops spp.) display some of the most extreme morphological and physiological adaptations in the plant kingdom to tolerate the xeric environments in which they grow. The physiological mechanisms that optimise the photosynthetic processes of Lithops spp. while minimising transpirational water loss in both above- and below-ground tissues remain unclear. Our experiments have shown unique simultaneous high-light and shade-tolerant adaptations within individual leaves of Lithops aucampiae. Leaf windows on the upper surfaces of the plant allow sunlight to penetrate to photosynthetic tissues within while sunlight-blocking flavonoid accumulation limits incoming solar radiation and aids screening of harmful UV radiation. Increased concentration of chlorophyll a and greater chlorophyll a:b in above-ground regions of leaves enable maximum photosynthetic use of incoming light, while inverted conical epidermal cells, increased chlorophyll b, and reduced chlorophyll a:b ensure maximum absorption and use of low light levels within the below-ground region of the leaf. High NPQ capacity affords physiological flexibility under variable natural light conditions. Our findings demonstrate unprecedented physiological flexibility in a xerophyte and further our understanding of plant responses and adaptations to extreme environments.

Benthic macrofaunal colonization patterns and preservation of laminated sediments: Observations in an extreme coastal basin environment in the lower Gulf of California

NASA Astrophysics Data System (ADS)

Herguera, J.; Paull, C. K.; Anderson, K.; Gwiazda, R.; Lundsten, E. M.; Kundz, L.; Edwards, B. D.; McGann, M. L.

2012-12-01

New observations and cores obtained with the ROV Doc Ricketts operated from the RV/Western Flyer provide a glimpse into a macrofauna barren sea-floor where laminated sediments are known to accumulate on the sea-floor of Alfonso Basin. This basin, located north of La Paz Bay, Baja California, is known to be an important repository of laminated sediments due to a combination of the relatively high input of terrigenous sediments brought in by summer rains, a moderate to high export productivity from its surface waters, and the very low oxygen concentrations at depth bathed by tropical subsurface waters. These laminated sediments are unique repositories of paleoceanographic and paleoclimatic information for its very high resolution records of past conditions comparable to ice core, tree ring, coral and cave records although spanning continuously much further back in time. However, the paleoceanographic community rarely has had the opportunity to visualize the seafloor surface where these sediments are accumulating and examine the biological abundance patterns in these extreme environments. Here we will show results from ROV Doc Ricketts quantitative video transects providing benthic faunal abundance patterns on the seafloor in these highly oxygen depleted bottom waters. These observations are further compared with the underlying stratigraphy. A coring system carried on the ROV allowed us to replicate cores and to collect a transect of 5 closely spaced cores to evaluate the horizontal extent of the observed variability down-core. We will also show some preliminary results from x-radiographs showing the nature of the laminations and its sediment composition based on elemental analysis on organic carbon, carbonate and biogenic opal analysis. New XRF results from a box core will be used to calibrate its terrigenous components with the historical rainfall record and evaluate its potential to reconstruct summer precipitation patterns in this region.

Extreme Droughts In Sydney And Melbourne Since The 1850s

NASA Astrophysics Data System (ADS)

Dogan, Selim

2014-05-01

Sydney and Melbourne are the two highly populated and very well known Australian cities. Population is over 4 million for each. These cities are subject to extreme droughts which affect regional water resources and cause substantial agricultural and economic losses. This study presents a drought analysis of Sydney and Melbourne for the period of 1850s to date by using Effective Drought Index (EDI) and Standardized Precipitation Index (SPI). EDI is a function of precipitation needed for return to normal conditions, the amount of precipitation necessary for recovery from the accumulated deficit since the beginning of a drought. SPI is the most popular and widely used drought index for the last decades. According to the results of EDI analysis; 8 different extreme drought events identified in Sydney, and 5 events in Melbourne since 1850s. The characterization of these extreme drought events were investigated in terms of magnitude, duration, intensity and interarrival time between previous drought event. EDI results were compared with the results of SPI and the similarities and differences were then discussed in more detail. The most severe drought event was identified for the period of July 1979 to February 1981 (lasted 19 months) for Sydney, while the most severe drought took longer in Melbourne for the period of March 2006 to February 2010 (47 months). This study focuses on the benefits of the use of EDI and SPI methods in order to monitor droughts beside presenting the extreme drought case study of Sydney and Melbourne.

Toward seamless high-resolution flash flood forecasting over Europe based on radar nowcasting and NWP: An evaluation with case studies

NASA Astrophysics Data System (ADS)

Park, Shinju; Berenguer, Marc; Sempere-Torres, Daniel; Baugh, Calum; Smith, Paul

2017-04-01

Flash floods induced by heavy rain are one of the hazardous natural events that significantly affect human lives. Because flash floods are characterized by their rapid onset, forecasting flash flood to lead an effective response requires accurate rainfall predictions with high spatial and temporal resolution and adequate representation of the hydrologic and hydraulic processes within a catchment that determine rainfall-runoff accumulations. We present extreme flash flood cases which occurred throughout Europe in 2015-2016 that were identified and forecasted by two real-time approaches: 1) the European Rainfall-Induced Hazard Assessment System (ERICHA) and 2) the European Runoff Index based on Climatology (ERIC). ERICHA is based on the nowcasts of accumulated precipitation generated from the pan-European radar composites produced by the EUMETNET project OPERA. It has the advantage of high-resolution precipitation inputs and rapidly updated forecasts (every 15 minutes), but limited forecast lead time (up to 8 hours). ERIC, on the other hand, provides 5-day forecasts based on the COSMO-LEPS NWP simulations updated 2 times a day but is only produced at a 7 km resolution. We compare the products from both systems and focus on showing the advantages, limitations and complementarities of ERICHA and ERIC for seamless high-resolution flash flood forecasting.

Joint probabilities of extreme precipitation and wind gusts in Germany

NASA Astrophysics Data System (ADS)

von Waldow, H.; Martius, O.

2012-04-01

Extreme meteorological events such as storms, heavy rain, floods, droughts and heat waves can have devastating consequences for human health, infrastructure and ecosystems. Concomitantly occurring extreme events might interact synergistically to produce a particularly hazardous impact. The joint occurrence of droughts and heat waves, for example, can have a very different impact on human health and ecosystems both in quantity and quality, than just one of the two extreme events. The co-occurrence of certain types of extreme events is plausible from physical and dynamical considerations, for example heavy precipitation and high wind speeds in the pathway of strong extratropical cyclones. The winter storm Kyrill not only caused wind gust speeds well in excess of 30 m/s across Europe, but also brought 24 h precipitation sums greater than the mean January accumulations in some regions. However, the existence of such compound risks is currently not accounted for by insurance companies, who assume independence of extreme weather events to calculate their premiums. While there are established statistical methods to model the extremes of univariate meteorological variables, the modelling of multidimensional extremes calls for an approach that is tailored to the specific problem at hand. A first step involves defining extreme bivariate wind/precipitation events. Because precipitation and wind gusts caused by the same cyclone or convective cell do not occur at exactly the same location and at the same time, it is necessary to find a sound definition of "extreme compound event" for this case. We present a data driven method to choose appropriate time and space intervals that define "concomitance" for wind and precipitation extremes. Based on station data of wind speed and gridded precipitation data, we arrive at time and space intervals that compare well with the typical time and space scales of extratropical cyclones, i.e. a maximum time lag of 1 day and a maximum distance of about 300 km between associated wind and rain events. After modelling extreme precipitation and wind separately, we explore the practicability of characterising their joint distribution using a bivariate threshold excess model. In particular, we present different dependence measures and report about the computational feasibility and available computer codes.

Saccharomyces cerevisiae glycerol/H+ symporter Stl1p is essential for cold/near-freeze and freeze stress adaptation. A simple recipe with high biotechnological potential is given

PubMed Central

2010-01-01

Background Freezing is an increasingly important means of preservation and storage of microbial strains used for many types of industrial applications including food processing. However, the yeast mechanisms of tolerance and sensitivity to freeze or near-freeze stress are still poorly understood. More knowledge on this regard would improve their biotechnological potential. Glycerol, in particular intracellular glycerol, has been assigned as a cryoprotectant, also important for cold/near-freeze stress adaptation. The S. cerevisiae glycerol active transporter Stl1p plays an important role on the fast accumulation of glycerol. This gene is expressed under gluconeogenic conditions, under osmotic shock and stress, as well as under high temperatures. Results We found that cells grown on STL1 induction medium (YPGE) and subjected to cold/near-freeze stress, displayed an extremely high expression of this gene, also visible at glycerol/H+ symporter activity level. Under the same conditions, the strains harbouring this transporter accumulated more than 400 mM glycerol, whereas the glycerol/H+ symporter mutant presented less than 1 mM. Consistently, the strains able to accumulate glycerol survive 25-50% more than the stl1Δ mutant. Conclusions In this work, we report the contribution of the glycerol/H+ symporter Stl1p for the accumulation and maintenance of glycerol intracellular levels, and consequently cell survival at cold/near-freeze and freeze temperatures. These findings have a high biotechnological impact, as they show that any S. cerevisiae strain already in use can become more resistant to cold/freeze-thaw stress just by simply adding glycerol to the broth. The combination of low temperatures with extracellular glycerol will induce the transporter Stl1p. This solution avoids the use of transgenic strains, in particular in food industry. PMID:21047428

Characterization of a selenium-tolerant rhizosphere strain from a novel Se-hyperaccumulating plant Cardamine hupingshanesis.

PubMed

Tong, Xinzhao; Yuan, Linxi; Luo, Lei; Yin, Xuebin

2014-01-01

A novel selenium- (Se-) hyperaccumulating plant, Cardamine hupingshanesis, accumulating Se as a form of SeCys2, was discovered in Enshi, Hubei, China, which could not be explained by present selenocysteine methyltransferase (SMT) theory. However, it is interesting to investigate if rhizosphere bacteria play some roles during SeCys2 accumulation. Here, one Se-tolerant rhizosphere strain, Microbacterium oxydans, was isolated from C. hupingshanesis. Phylogenetic analysis and 16S rRNA gene sequences determined the strain as a kind of Gram positive bacillus and belonged to the family Brevibacterium frigoritolerans. Furthermore, Se tolerance test indicated the strain could grow in extreme high Se level of 15.0 mg Se L(-1). When exposed to 1.5 mg Se L(-1), SeCys2 was the predominant Se species in the bacteria, consistent with the Se species in C. hupingshanesis. This coincidence might reveal that this strain played some positive effect in SeCys2 accumulation of C. hupingshanesis. Moreover, when exposed to 1.5 mg Se L(-1) or 15.0 mg Se L(-1), As absorption diminished in the logarithmic phase. In contrast, As absorption increased when exposed to 7.5 mg Se L(-1), indicating As metabolism processes could be affected by Se on this strain. The present study provided a sight on the role of rhizosphere bacteria during Se accumulation for Se-hyperaccumulating plant.

Climate events synchronize the dynamics of a resident vertebrate community in the high Arctic.

PubMed

Hansen, Brage B; Grøtan, Vidar; Aanes, Ronny; Sæther, Bernt-Erik; Stien, Audun; Fuglei, Eva; Ims, Rolf A; Yoccoz, Nigel G; Pedersen, Ashild Ø

2013-01-18

Recently accumulated evidence has documented a climate impact on the demography and dynamics of single species, yet the impact at the community level is poorly understood. Here, we show that in Svalbard in the high Arctic, extreme weather events synchronize population fluctuations across an entire community of resident vertebrate herbivores and cause lagged correlations with the secondary consumer, the arctic fox. This synchronization is mainly driven by heavy rain on snow that encapsulates the vegetation in ice and blocks winter forage availability for herbivores. Thus, indirect and bottom-up climate forcing drives the population dynamics across all overwintering vertebrates. Icing is predicted to become more frequent in the circumpolar Arctic and may therefore strongly affect terrestrial ecosystem characteristics.

Gate field plate IGBT with trench accumulation layer for extreme injection enhancement

NASA Astrophysics Data System (ADS)

Xu, Xiaorui; Chen, Wanjun; Liu, Chao; Chen, Nan; Tao, Hong; Shi, Yijun; Ma, Yinchang; Zhou, Qi; Zhang, Bo

2017-04-01

A gate field plate IGBT (GFP-IGBT) with extreme injection enhancement is proposed and verified using TCAD simulations. The GFP-IGBT features a gate field plate (GFP) inserted into n-drift region directly and a tiny P-base region separated from the GFP. In the ON-state, the accumulation layer is formed near to not only the bottom but also the side of the trench, which enhances electron injection efficiency. And the tiny P-base region reduces the holes extracted by reverse-biased P-base/N-drift junction. Both the GFP and tiny P-base contribute to achieving extreme injection enhancement, leading to a low forward voltage drop. In the OFF-state, due to the low stored charges in N-buffer layer, GFP-IGBT shows a short current fall time, leading to a decrease of turn-off loss. The simulation results show that, compared with the conventional IGBT, the GFP-IGBT offers a forward voltage drop reduction of 25% or current fall time reduction of 89% (i.e. turn-off loss reduction of 53%), resulting in low power loss. The excellent device performance, coupled with a commercial IGBT-compatible fabrication process, makes the proposed GFP-IGBT a promising candidate for power switching applications.

Madelung disease: a rare case associated with gynaecomastia and scrotal involvement.

PubMed

Nikolić, Zivorad S; Jeremić, Jelena V; Drčić, Lazar J; Rakočević, Zoran B; Tačević, Zoran D; Jeremić, Katarina V; Stojnić, Jelena D

2013-10-01

Madelung disease is rare, and characterised by accumulation of fatty non-encapsulated tissue in the head, neck, shoulders, and upper extremities. The aetiology is not completely known, but the association with alcohol intake is clear. We present a neglected case that was associated with bilateral asymmetrical gynaecomastia. To the best of our knowledge, this is a pattern of involvement not previously reported. The treatment of choice is lipectomy for severe cases and liposuction for less extensive accumulations of fat.

Relationships between High Impact Tropical Rainfall Events and Environmental Conditions

NASA Astrophysics Data System (ADS)

Painter, C.; Varble, A.; Zipser, E. J.

2017-12-01

While rainfall increases as moisture and vertical motion increase, relationships between regional environmental conditions and rainfall event characteristics remain more uncertain. Of particular importance are long duration, heavy rain rate, and significant accumulation events that contribute sizable fractions of overall precipitation over short time periods. This study seeks to establish relationships between observed rainfall event properties and environmental conditions. Event duration, rain rate, and rainfall accumulation are derived using the Tropical Rainfall Measuring Mission (TRMM) 3B42 3-hourly, 0.25° resolution rainfall retrieval from 2002-2013 between 10°N and 10°S. Events are accumulated into 2.5° grid boxes and matched to monthly mean total column water vapor (TCWV) and 500-hPa vertical motion (omega) in each 2.5° grid box, retrieved from ERA-interim reanalysis. Only months with greater than 3 mm/day rainfall are included to ensure sufficient sampling. 90th and 99th percentile oceanic events last more than 20% longer and have rain rates more than 20% lower than those over land for a given TCWV-omega condition. Event duration and accumulation are more sensitive to omega than TCWV over oceans, but more sensitive to TCWV than omega over land, suggesting system size, propagation speed, and/or forcing mechanism differences for land and ocean regions. Sensitivities of duration, rain rate, and accumulation to TCWV and omega increase with increasing event extremity. For 3B42 and ERA-Interim relationships, the 90th percentile oceanic event accumulation increases by 0.93 mm for every 1 Pa/min change in rising motion, but this increases to 3.7 mm for every 1 Pa/min for the 99th percentile. Over land, the 90th percentile event accumulation increases by 0.55 mm for every 1 mm increase in TCWV, whereas the 99th percentile increases by 0.90 mm for every 1 mm increase in TCWV. These changes in event accumulation are highly correlated with changes in event duration. Relationships between 3B42 event properties and ERA-Interim environmental conditions are currently being evaluated using the MERRA-2 reanalysis and two years of 30-minute, 0.1° Integrated Multi-satellitE Retrievals for GPM (IMERG) data. If results remain consistent, they may be valuable for evaluating weather and climate models.

Before you install exterior wood-based siding

Treesearch

Mark T. Knaebe

1995-01-01

Moisture accumulation and extreme fluctuations in moisture levels can adversely affect the service life of components, such as wood siding and windows. Adverse moisture conditions can induce checking, warping, paint failure, and in severe cases, rotting of the wood.

Geo-Accumulation Indices of Heavy Metals in Soil and Groundwater of Kanpur, India Under Long Term Irrigation of Tannery Effluent.

PubMed

Dotaniya, M L; Meena, V D; Rajendiran, S; Coumar, M Vassanda; Saha, J K; Kundu, S; Patra, A K

2017-05-01

Soil and groundwater from long-term (>50 years) tannery effluent irrigated areas of Kanpur were analyzed and significant buildup of heavy metals such as Cr, Ni, Cd, Pb, Zn, and As in the range of 252-972, 23-30, 2.3-14.1, 23.7-58.8, 138-338 and 6.8-11 mg kg -1 , respectively in soil was found. Few groundwater samples in the effluent irrigated areas also exhibited high Cr concentration above the permissible limit of United States Environmental Protection Agency. The tannery effluents contained 1.53-57.3 ppm Cr, 0-0.12 ppm Ni, 0-0.02 ppm Cd, 0-0.07 ppm Pb, 0-0.48 ppm Zn and 0-0.03 ppm As. The Geo-accumulation index (I geo ) revealed that soil samples were unpolluted to moderately polluted with Cu, Ni, Zn, Pb and As; moderately polluted in case of Cd; and heavily to extremely polluted by Cr.

Paying the pipers: Mitigating the impact of anticoagulant rodenticides on predators and scavengers

USGS Publications Warehouse

Elliott, John E.; Rattner, Barnett A.; Shore, Richard F.; van den Brink, Nico W.

2016-01-01

Anticoagulant rodenticides, mainly second-generation forms, or SGARs, dominate the global market for rodent control. Introduced in the 1970s to counter genetic resistance in rodent populations to first-generation compounds such as warfarin, SGARs are extremely toxic and highly effective killers. However, their tendency to persist and accumulate in the body has led to the widespread contamination of terrestrial predators and scavengers. Commercial chemicals that are classified by regulators as persistent, bio-accumulative, and toxic (PBT) chemicals and that are widely used with potential environmental release, such as dichloro-diphenyl-trichloroethane (DDT) or polychlorinated biphenyls (PCBs), have been removed from commerce. However, despite consistently failing ecological risk assessments, SGARs remain in use because of the demand for effective rodent-control options and the lack of safe and humane alternatives. Although new risk-mitigation measures for rodenticides are now in effect in some countries, the contamination and poisoning of nontarget wildlife are expected to continue. Here, we suggest options to further attenuate this problem.

Revisiting the Quantum Brain Hypothesis: Toward Quantum (Neuro)biology?

PubMed Central

Jedlicka, Peter

2017-01-01

The nervous system is a non-linear dynamical complex system with many feedback loops. A conventional wisdom is that in the brain the quantum fluctuations are self-averaging and thus functionally negligible. However, this intuition might be misleading in the case of non-linear complex systems. Because of an extreme sensitivity to initial conditions, in complex systems the microscopic fluctuations may be amplified and thereby affect the system’s behavior. In this way quantum dynamics might influence neuronal computations. Accumulating evidence in non-neuronal systems indicates that biological evolution is able to exploit quantum stochasticity. The recent rise of quantum biology as an emerging field at the border between quantum physics and the life sciences suggests that quantum events could play a non-trivial role also in neuronal cells. Direct experimental evidence for this is still missing but future research should address the possibility that quantum events contribute to an extremely high complexity, variability and computational power of neuronal dynamics. PMID:29163041

Real-time turbulence profiling with a pair of laser guide star Shack-Hartmann wavefront sensors for wide-field adaptive optics systems on large to extremely large telescopes.

PubMed

Gilles, L; Ellerbroek, B L

2010-11-01

Real-time turbulence profiling is necessary to tune tomographic wavefront reconstruction algorithms for wide-field adaptive optics (AO) systems on large to extremely large telescopes, and to perform a variety of image post-processing tasks involving point-spread function reconstruction. This paper describes a computationally efficient and accurate numerical technique inspired by the slope detection and ranging (SLODAR) method to perform this task in real time from properly selected Shack-Hartmann wavefront sensor measurements accumulated over a few hundred frames from a pair of laser guide stars, thus eliminating the need for an additional instrument. The algorithm is introduced, followed by a theoretical influence function analysis illustrating its impulse response to high-resolution turbulence profiles. Finally, its performance is assessed in the context of the Thirty Meter Telescope multi-conjugate adaptive optics system via end-to-end wave optics Monte Carlo simulations.

Revisiting the Quantum Brain Hypothesis: Toward Quantum (Neuro)biology?

PubMed

Jedlicka, Peter

2017-01-01

The nervous system is a non-linear dynamical complex system with many feedback loops. A conventional wisdom is that in the brain the quantum fluctuations are self-averaging and thus functionally negligible. However, this intuition might be misleading in the case of non-linear complex systems. Because of an extreme sensitivity to initial conditions, in complex systems the microscopic fluctuations may be amplified and thereby affect the system's behavior. In this way quantum dynamics might influence neuronal computations. Accumulating evidence in non-neuronal systems indicates that biological evolution is able to exploit quantum stochasticity. The recent rise of quantum biology as an emerging field at the border between quantum physics and the life sciences suggests that quantum events could play a non-trivial role also in neuronal cells. Direct experimental evidence for this is still missing but future research should address the possibility that quantum events contribute to an extremely high complexity, variability and computational power of neuronal dynamics.

Highly Sensitive Detection of UV Radiation Using a Uranium Coordination Polymer.

PubMed

Liu, Wei; Dai, Xing; Xie, Jian; Silver, Mark A; Zhang, Duo; Wang, Yanlong; Cai, Yawen; Diwu, Juan; Wang, Jian; Zhou, Ruhong; Chai, Zhifang; Wang, Shuao

2018-02-07

The accurate detection of UV radiation is required in a wide range of chemical industries and environmental or biological related applications. Conventional methods taking advantage of semiconductor photodetectors suffer from several drawbacks such as sophisticated synthesis and manufacturing procedure, not being able to measure the accumulated UV dosage as well as high defect density in the material. Searching for new strategies or materials serving as precise UV dosage sensor with extremely low detection limit is still highly desirable. In this work, a radiation resistant uranium coordination polymer [UO 2 (L)(DMF)] (L = 5-nitroisophthalic acid, DMF = N,N-dimethylformamide, denoted as compound 1) was successfully synthesized through mild solvothermal method and investigated as a unique UV probe with the detection limit of 2.4 × 10 -7 J. On the basis of the UV dosage dependent luminescence spectra, EPR analysis, single crystal structure investigation, and the DFT calculation, the UV-induced radical quenching mechanism was confirmed. Importantly, the generated radicals are of significant stability which offers the opportunity for measuring the accumulated UV radiation dosage. Furthermore, the powder material of compound 1 was further upgraded into membrane material without loss in luminescence intensity to investigate the real application potentials. To the best of our knowledge, compound 1 represents the most sensitive coordination polymer based UV dosage probe reported to date.

Surface electrons in inverted layers of p-HgCdTe

NASA Technical Reports Server (NTRS)

Schacham, Samuel E.; Finkman, Eliezer

1990-01-01

Anodic oxide passivation of p-type HgCdTe generates an inversion layer. Extremely high Hall mobility data for electrons in this layer indicated the presence of a two-dimensional electron gas. This is verified by use of the Shubnikov-de Haas effect from 1.45 to 4.15 K. Data are extracted utilizing a numerical second derivative of dc measurement. Three sub-bands are detected. Their relative occupancies are in excellent agreement with theory and with experimental results obtained on anodic oxide as accumulation layers of n-type HgCdTe. The effective mass derived is comparable to what was expected.

Packaging and Delivery of Chemical Weapons: A Defensive Trojan Horse Stratagem in Chromodorid Nudibranchs

PubMed Central

Carbone, Marianna; Gavagnin, Margherita; Haber, Markus; Guo, Yue-Wei; Fontana, Angelo; Manzo, Emiliano; Genta-Jouve, Gregory; Tsoukatou, Maria; Rudman, William B.; Cimino, Guido; Ghiselin, Michael T.; Mollo, Ernesto

2013-01-01

Background Storage of secondary metabolites with a putative defensive role occurs in the so-called mantle dermal formations (MDFs) that are located in the more exposed parts of the body of most and very likely all members of an entire family of marine mollusks, the chromodorid nudibranchs (Gastropoda: Opisthobranchia). Given that these structures usually lack a duct system, the mechanism for exudation of their contents remains unclear, as does their adaptive significance. One possible explanation could be that they are adapted so as to be preferentially attacked by predators. The nudibranchs might offer packages containing highly repugnant chemicals along with parts of their bodies to the predators, as a defensive variant of the strategic theme of the Trojan horse. Methodology and Principal Findings We detected, by quantitative 1H-NMR, extremely high local concentrations of secondary metabolites in the MDFs of six species belonging to five chromodorid genera. The compounds were purified by chromatographic methods and subsequently evaluated for their feeding deterrent properties, obtaining dose-response curves. We found that only distasteful compounds are accumulated in the reservoirs at concentrations that far exceed the values corresponding to maximum deterrent activity in the feeding assays. Other basic evidence, both field and experimental, has been acquired to elucidate the kind of damage that the predators can produce on both the nudibranchs' mantles and the MDFs. Significance As a result of a long evolutionary process that has progressively led to the accumulation of defensive chemical weapons in localized anatomical structures, the extant chromodorid nudibranchs remain in place when molested, retracting respiratory and chemosensory organs, but offering readily accessible parts of their body to predators. When these parts are masticated or wounded by predators, breakage of the MDFs results in the release of distasteful compounds at extremely high concentration in a way that maximizes their repugnant impact. PMID:23620804

Convective and microphysics parameterization impact on simulating heavy rainfall in Semarang (case study on February 12th, 2015)

NASA Astrophysics Data System (ADS)

Faridatussafura, Nurzaka; Wandala, Agie

2018-05-01

The meteorological model WRF-ARW version 3.8.1 is used for simulating the heavy rainfall in Semarang that occurred on February 12th, 2015. Two different convective schemes and two different microphysics scheme in a nested configuration were chosen. The sensitivity of those schemes in capturing the extreme weather event has been tested. GFS data were used for the initial and boundary condition. Verification on the twenty-four hours accumulated rainfall using GSMaPsatellite data shows that Kain-Fritsch convective scheme and Lin microphysics scheme is the best combination scheme among the others. The combination also gives the highest success ratio value in placing high intensity rainfall area. Based on the ROC diagram, KF-Lin shows the best performance in detecting high intensity rainfall. However, the combination still has high bias value.

GPS FOM Chimney Analysis using Generalized Extreme Value Distribution

NASA Technical Reports Server (NTRS)

Ott, Rick; Frisbee, Joe; Saha, Kanan

2004-01-01

Many a time an objective of a statistical analysis is to estimate a limit value like 3-sigma 95% confidence upper limit from a data sample. The generalized Extreme Value Distribution method can be profitably employed in many situations for such an estimate. . .. It is well known that according to the Central Limit theorem the mean value of a large data set is normally distributed irrespective of the distribution of the data from which the mean value is derived. In a somewhat similar fashion it is observed that many times the extreme value of a data set has a distribution that can be formulated with a Generalized Distribution. In space shuttle entry with 3-string GPS navigation the Figure Of Merit (FOM) value gives a measure of GPS navigated state accuracy. A GPS navigated state with FOM of 6 or higher is deemed unacceptable and is said to form a FOM 6 or higher chimney. A FOM chimney is a period of time during which the FOM value stays higher than 5. A longer period of FOM of value 6 or higher causes navigated state to accumulate more error for a lack of state update. For an acceptable landing it is imperative that the state error remains low and hence at low altitude during entry GPS data of FOM greater than 5 must not last more than 138 seconds. I To test the GPS performAnce many entry test cases were simulated at the Avionics Development Laboratory. Only high value FoM chimneys are consequential. The extreme value statistical technique is applied to analyze high value FOM chimneys. The Maximum likelihood method is used to determine parameters that characterize the GEV distribution, and then the limit value statistics are estimated.

Hierarchical adaptive nanostructured PVD coatings for extreme tribological applications: the quest for nonequilibrium states and emergent behavior.

PubMed

Fox-Rabinovich, German S; Yamamoto, Kenji; Beake, Ben D; Gershman, Iosif S; Kovalev, Anatoly I; Veldhuis, Stephen C; Aguirre, Myriam H; Dosbaeva, Goulnara; Endrino, Jose L

2012-08-01

Adaptive wear-resistant coatings produced by physical vapor deposition (PVD) are a relatively new generation of coatings which are attracting attention in the development of nanostructured materials for extreme tribological applications. An excellent example of such extreme operating conditions is high performance machining of hard-to-cut materials. The adaptive characteristics of such coatings develop fully during interaction with the severe environment. Modern adaptive coatings could be regarded as hierarchical surface-engineered nanostructural materials. They exhibit dynamic hierarchy on two major structural scales: (a) nanoscale surface layers of protective tribofilms generated during friction and (b) an underlying nano/microscaled layer. The tribofilms are responsible for some critical nanoscale effects that strongly impact the wear resistance of adaptive coatings. A new direction in nanomaterial research is discussed: compositional and microstructural optimization of the dynamically regenerating nanoscaled tribofilms on the surface of the adaptive coatings during friction. In this review we demonstrate the correlation between the microstructure, physical, chemical and micromechanical properties of hard coatings in their dynamic interaction (adaptation) with environment and the involvement of complex natural processes associated with self-organization during friction. Major physical, chemical and mechanical characteristics of the adaptive coating, which play a significant role in its operating properties, such as enhanced mass transfer, and the ability of the layer to provide dissipation and accumulation of frictional energy during operation are presented as well. Strategies for adaptive nanostructural coating design that enhance beneficial natural processes are outlined. The coatings exhibit emergent behavior during operation when their improved features work as a whole. In this way, as higher-ordered systems, they achieve multifunctionality and high wear resistance under extreme tribological conditions.

Hierarchical adaptive nanostructured PVD coatings for extreme tribological applications: the quest for nonequilibrium states and emergent behavior

PubMed Central

Fox-Rabinovich, German S; Yamamoto, Kenji; Beake, Ben D; Gershman, Iosif S; Kovalev, Anatoly I; Veldhuis, Stephen C; Aguirre, Myriam H.; Dosbaeva, Goulnara; Endrino, Jose L

2012-01-01

Adaptive wear-resistant coatings produced by physical vapor deposition (PVD) are a relatively new generation of coatings which are attracting attention in the development of nanostructured materials for extreme tribological applications. An excellent example of such extreme operating conditions is high performance machining of hard-to-cut materials. The adaptive characteristics of such coatings develop fully during interaction with the severe environment. Modern adaptive coatings could be regarded as hierarchical surface-engineered nanostructural materials. They exhibit dynamic hierarchy on two major structural scales: (a) nanoscale surface layers of protective tribofilms generated during friction and (b) an underlying nano/microscaled layer. The tribofilms are responsible for some critical nanoscale effects that strongly impact the wear resistance of adaptive coatings. A new direction in nanomaterial research is discussed: compositional and microstructural optimization of the dynamically regenerating nanoscaled tribofilms on the surface of the adaptive coatings during friction. In this review we demonstrate the correlation between the microstructure, physical, chemical and micromechanical properties of hard coatings in their dynamic interaction (adaptation) with environment and the involvement of complex natural processes associated with self-organization during friction. Major physical, chemical and mechanical characteristics of the adaptive coating, which play a significant role in its operating properties, such as enhanced mass transfer, and the ability of the layer to provide dissipation and accumulation of frictional energy during operation are presented as well. Strategies for adaptive nanostructural coating design that enhance beneficial natural processes are outlined. The coatings exhibit emergent behavior during operation when their improved features work as a whole. In this way, as higher-ordered systems, they achieve multifunctionality and high wear resistance under extreme tribological conditions. PMID:27877499

Extreme Rainfall from Hurricane Harvey (2017): Intercomparisons of WRF Simulations and Polarimetric Radar Fields

NASA Astrophysics Data System (ADS)

Yang, L.; Smith, J. A.; Liu, M.; Baeck, M. L.; Chaney, M. M.; Su, Y.

2017-12-01

Hurricane Harvey made landfall on 25 August 2017 and produced more than a meter of rain during a four-day period over eastern Texas, making it the wettest tropical cyclone on record in the United States. Extreme rainfall from Harvey was predominantly related to the dynamics and structure of outer rain bands. In this study, we provide details of the extreme rainfall produced by Hurricane Harvey. The principal research questions that motivate this study are: (1) what are the key microphysical properties of extreme rainfall from landfalling tropical cyclones and (2) what are the capabilities and deficiencies of existing bulk microphysics parameterizations from the physical models in capturing them. Our analyses are centered on intercomparisons of high-resolution simulations using the Weather Research and Forecasting (WRF) model and polarimetric radar fields from KHGX (Houston, Texas) WSR-88D. The WRF simulations accurately capture the track and intensity of Hurricane Harvey. Multi-rainband structure and its key evolution features are also well represented in the simulations. Two microphysics parameterizations (WSM6 and WDM6) are tested in this study. Radar reflectivity and differential reflectivity fields simulated by the WRF model are compared with polarimetric radar observations. An important feature for the extreme rainfall from Hurricane Harvey is the sharp boundary of spatial rainfall accumulation along the coast (with torrential rainfall distributed over Houston and its surrounding inland areas). We will examine the role of land-sea contrasts in dictating storm structure and evolution from both WRF simulations and polarimetric radar fields. Implications for improving hurricane rainfall forecasts and estimates will be provided.

Using Extreme Tropical Precipitation Statistics to Constrain Future Climate States

NASA Astrophysics Data System (ADS)

Igel, M.; Biello, J. A.

2017-12-01

Tropical precipitation is characterized by a rapid growth in mean intensity as the column humidity increases. This behavior is examined in both a cloud resolving model and with high-resolution observations of precipitation and column humidity from CloudSat and AIRS, respectively. The model and the observations exhibit remarkable consistency and suggest a new paradigm for extreme precipitation. We show that the total precipitation can be decomposed into a product of contributions from a mean intensity, a probability of precipitation, and a global PDF of column humidity values. We use the modeling and observational results to suggest simple, analytic forms for each of these functions. The analytic representations are then used to construct a simple expression for the global accumulated precipitation as a function of the parameters of each of the component functions. As the climate warms, extreme precipitation intensity and global precipitation are expected to increase, though at different rates. When these predictions are incorporated into the new analytic expression for total precipitation, predictions for changes due to global warming to the probability of precipitation and the PDF of column humidity can be made. We show that strong constraints can be imposed on the future shape of the PDF of column humidity but that only weak constraints can be set on the probability of precipitation. These are largely imposed by the intensification of extreme precipitation. This result suggests that understanding precisely how extreme precipitation responds to climate warming is critical to predicting other impactful properties of global hydrology. The new framework can also be used to confirm and discount existing theories for shifting precipitation.

Continuous exposure to low amplitude extremely low frequency electrical fields characterizing the vascular streaming potential alters elastin accumulation in vascular smooth muscle cells.

PubMed

Bergethon, Peter R; Kindler, Dean D; Hallock, Kevin; Blease, Susan; Toselli, Paul

2013-07-01

In normal development and pathology, the vascular system depends on complex interactions between cellular elements, biochemical molecules, and physical forces. The electrokinetic vascular streaming potential (EVSP) is an endogenous extremely low frequency (ELF) electrical field resulting from blood flowing past the vessel wall. While generally unrecognized, it is a ubiquitous electrical biophysical force to which the vascular tree is exposed. Extracellular matrix elastin plays a central role in normal blood vessel function and in the development of atherosclerosis. It was hypothesized that ELF fields of low amplitude would alter elastin accumulation, supporting a link between the EVSP and the biology of vascular smooth muscle cells. Neonatal rat aortic smooth muscle cell cultures were exposed chronically to electrical fields characteristic of the EVSP. Extracellular protein accumulation, DNA content, and electron microscopic (EM) evaluation were performed after 2 weeks of exposure. Stimulated cultures showed no significant change in cellular proliferation as measured by the DNA concentration. The per-DNA normalized protein in the extracellular matrix was unchanged while extracellular elastin accumulation decreased 38% on average. EM analysis showed that the stimulated cells had a 2.85-fold increase in mitochondrial number. These results support the formulation that ELF fields are a potential factor in both normal vessel biology and in the pathogenesis of atherosclerotic diseases including heart disease, stroke, and peripheral vascular disease. Copyright © 2013 Wiley Periodicals, Inc.

Tissue-specific mutation accumulation in human adult stem cells during life

NASA Astrophysics Data System (ADS)

Blokzijl, Francis; de Ligt, Joep; Jager, Myrthe; Sasselli, Valentina; Roerink, Sophie; Sasaki, Nobuo; Huch, Meritxell; Boymans, Sander; Kuijk, Ewart; Prins, Pjotr; Nijman, Isaac J.; Martincorena, Inigo; Mokry, Michal; Wiegerinck, Caroline L.; Middendorp, Sabine; Sato, Toshiro; Schwank, Gerald; Nieuwenhuis, Edward E. S.; Verstegen, Monique M. A.; van der Laan, Luc J. W.; de Jonge, Jeroen; Ijzermans, Jan N. M.; Vries, Robert G.; van de Wetering, Marc; Stratton, Michael R.; Clevers, Hans; Cuppen, Edwin; van Boxtel, Ruben

2016-10-01

The gradual accumulation of genetic mutations in human adult stem cells (ASCs) during life is associated with various age-related diseases, including cancer. Extreme variation in cancer risk across tissues was recently proposed to depend on the lifetime number of ASC divisions, owing to unavoidable random mutations that arise during DNA replication. However, the rates and patterns of mutations in normal ASCs remain unknown. Here we determine genome-wide mutation patterns in ASCs of the small intestine, colon and liver of human donors with ages ranging from 3 to 87 years by sequencing clonal organoid cultures derived from primary multipotent cells. Our results show that mutations accumulate steadily over time in all of the assessed tissue types, at a rate of approximately 40 novel mutations per year, despite the large variation in cancer incidence among these tissues. Liver ASCs, however, have different mutation spectra compared to those of the colon and small intestine. Mutational signature analysis reveals that this difference can be attributed to spontaneous deamination of methylated cytosine residues in the colon and small intestine, probably reflecting their high ASC division rate. In liver, a signature with an as-yet-unknown underlying mechanism is predominant. Mutation spectra of driver genes in cancer show high similarity to the tissue-specific ASC mutation spectra, suggesting that intrinsic mutational processes in ASCs can initiate tumorigenesis. Notably, the inter-individual variation in mutation rate and spectra are low, suggesting tissue-specific activity of common mutational processes throughout life.

Precipitation in Madeira island and atmospheric rivers in the winter seasons

NASA Astrophysics Data System (ADS)

Couto, Flavio T.; Salgado, Rui; João Costa, Maria; Prior, Victor

2016-04-01

This study aims to analyse the distribution of the daily accumulated precipitation in the Madeira's highlands over a 10-year period, as well as the main characteristics associated with atmospheric rivers (ARs) affecting the island during 10 winter seasons, and their impact in the rainfall amounts recorded near the mountain crest in the south-eastern part of the island. The period between September 2002 and November 2012 is considered for the analysis. The ARs have been identified from the total precipitable water vapour field extracted from the Atmospheric Infrared Sounder (AIRS). The AIRS observations were downloaded for a domain covering large part of the North Atlantic Ocean. The precipitable water vapour field from the European Centre for Medium-range Weather Forecasts (ECMWF) analysis was also used aiming to support the AIRS data when there was no satellite information over the island. The daily accumulated precipitation at surface showed generally drier summers, while the highest accumulated precipitation are recorded mainly during the winter, although some significant events may occur also in autumn and spring seasons. The patterns of the precipitable water vapour field when ARs reach the island were investigated, and even if great part of the atmospheric rivers reaches the island in a dissipation stage, some rivers are heavy enough to reach the Madeira Island. In this situation, the water vapour transport could be observed in two main configurations and transporting significant water vapour amounts toward the Madeira from the tropical region. This study lead to conclude that the atmospheric rivers, when associated to high values of precipitable water vapour over the island can provide favourable conditions to the development of precipitation, sometimes associated with high amounts. However, it was also found that many cases of high to extreme accumulated precipitation at the surface were not associated to this kind of moisture transport.

Identifying Patterns in Extreme Precipitation Risk and the Related Impacts

NASA Astrophysics Data System (ADS)

Schroeer, K.; Tye, M. R.

2017-12-01

Extreme precipitation can harm human life and assets through flooding, hail, landslides, or debris flows. Flood risk assessments typically concentrate on river or mountain torrent channels, using water depth, flow velocity, and/or sediment deposition to quantify the risk. In addition, extreme events with high recurrence intervals are often the main focus. However, damages from short-term and localized convective showers often occur away from watercourses. Also, damages from more frequent small scale extremes, although usually less disastrous, can accumulate to considerable financial burdens. Extreme convective precipitation is expected to intensify in a warmer climate, and vulnerability patterns might change in tandem with changes in the character of precipitation and flood types. This has consequences for adaptation planners who want to establish effective protection measures and reduce the cost from natural hazards. Here we merge hydrological and exposure data to identify patterns of risk under varying synoptic conditions. Exposure is calculated from a database of 76k damage claims reported to the national disaster fund in 480 municipalities in south eastern Austria from 1990-2015. Hydrological data comprise sub-daily precipitation (59 gauges) and streamflow (62 gauges) observations. We use synoptic circulation types to identify typical precipitation patterns. They indicate the character of precipitation even if a gauge is not in close proximity, facilitating potential future research with regional climate model data. Results show that more claims are reported under synoptic conditions favouring convective precipitation (on average 1.5-3 times more than on other days). For agrarian municipalities, convective precipitation damages are among the costliest after long low-intensity precipitation events. In contrast, Alpine communities are particularly vulnerable to convective high-intensity rainfall. In addition to possible observational error, uncertainty is present in damage reporting errors, claims from private insurers and adaptation effects after damaging events. As for the latter, preliminary results indicate that investments regularly occur after big events, which may skew subsequent damage claims. Their effectiveness, though, needs to be analyzed in future research.

Congenital Differences of the Upper Extremity: Classification and Treatment Principles

PubMed Central

2011-01-01

For hand surgeons, the treatment of children with congenital differences of the upper extremity is challenging because of the diverse spectrum of conditions encountered, but the task is also rewarding because it provides surgeons with the opportunity to impact a child's growth and development. An ideal classification of congenital differences of the upper extremity would reflect the full spectrum of morphologic abnormalities and encompass etiology, a guide to treatment, and provide prognoses. In this report, I review current classification systems and discuss their contradictions and limitations. In addition, I present a modified classification system and provide treatment principles. As our understanding of the etiology of congenital differences of the upper extremity increases and as experience of treating difficult cases accumulates, even an ideal classification system and optimal treatment strategies will undoubtedly continue to evolve. PMID:21909463

Environmental assessment of mining industry solid pollution in the mercurial district of Azzaba, northeast Algeria.

PubMed

Seklaoui, M'hamed; Boutaleb, Abdelhak; Benali, Hanafi; Alligui, Fadila; Prochaska, Walter

2016-11-01

To date, there have been few detailed studies regarding the impact of mining and metallogenic activities on solid fractions in the Azzaba mercurial district (northeast Algeria) despite its importance and global similarity with large Hg mines. To assess the degree, distribution, and sources of pollution, a physical inventory of apparent pollution was developed, and several samples of mining waste, process waste, sediment, and soil were collected on regional and local scales to determine the concentration of Hg and other metals according to their existing mineralogical association. Several physico-chemical parameters that are known to influence the pollution distribution are realized. The extremely high concentrations of all metals exceed all norms and predominantly characterize the metallurgic and mining areas; the metal concentrations significantly decrease at significant low distances from these sources. The geo-accumulation index, which is the most realistic assessment method, demonstrates that soils and sediments near waste dumps and abandoned Hg mines are extremely polluted by all analyzed metals. The pollution by these metals decreases significantly with distance, which indicates a limited dispersion. The results of a clustering analysis and an integrated pollution index suggest that waste dumps, which are composed of calcine and condensation wastes, are the main source of pollution. Correlations and principal component analysis reveal the important role of hosting carbonate rocks in limiting pollution and differentiating calcine wastes from condensation waste, which has an extremely high Hg concentration (˃1 %).

Gamma-glutamylcysteine and thiosulfate are the major low-molecular-weight thiols in halobacteria

NASA Technical Reports Server (NTRS)

Newton, Gerald L.; Javor, Barbara

1985-01-01

Six representative species of extremely halophilic bacteria were found to contain approximately millimolar concentrations of gamma-glutamylcysteine in the absence of significant glutathione. Thiosulfate also accumulated in the halobacteria, apparently as a major product of cysteine oxidation.

Characterization of a Selenium-Tolerant Rhizosphere Strain from a Novel Se-Hyperaccumulating Plant Cardamine hupingshanesis

PubMed Central

Yuan, Linxi; Luo, Lei; Yin, Xuebin

2014-01-01

A novel selenium- (Se-) hyperaccumulating plant, Cardamine hupingshanesis, accumulating Se as a form of SeCys2, was discovered in Enshi, Hubei, China, which could not be explained by present selenocysteine methyltransferase (SMT) theory. However, it is interesting to investigate if rhizosphere bacteria play some roles during SeCys2 accumulation. Here, one Se-tolerant rhizosphere strain, Microbacterium oxydans, was isolated from C. hupingshanesis. Phylogenetic analysis and 16S rRNA gene sequences determined the strain as a kind of Gram positive bacillus and belonged to the family Brevibacterium frigoritolerans. Furthermore, Se tolerance test indicated the strain could grow in extreme high Se level of 15.0 mg Se L−1. When exposed to 1.5 mg Se L−1, SeCys2 was the predominant Se species in the bacteria, consistent with the Se species in C. hupingshanesis. This coincidence might reveal that this strain played some positive effect in SeCys2 accumulation of C. hupingshanesis. Moreover, when exposed to 1.5 mg Se L−1 or 15.0 mg Se L−1, As absorption diminished in the logarithmic phase. In contrast, As absorption increased when exposed to 7.5 mg Se L−1, indicating As metabolism processes could be affected by Se on this strain. The present study provided a sight on the role of rhizosphere bacteria during Se accumulation for Se-hyperaccumulating plant. PMID:25478582

Comparative Transcriptome Analysis Reveals Critical Function of Sucrose Metabolism Related-Enzymes in Starch Accumulation in the Storage Root of Sweet Potato

PubMed Central

Zhang, Kai; Wu, Zhengdan; Tang, Daobin; Luo, Kai; Lu, Huixiang; Liu, Yingying; Dong, Jie; Wang, Xin; Lv, Changwen; Wang, Jichun; Lu, Kun

2017-01-01

The starch properties of the storage root (SR) affect the quality of sweet potato (Ipomoea batatas (L.) Lam.). Although numerous studies have analyzed the accumulation and properties of starch in sweet potato SRs, the transcriptomic variation associated with starch properties in SR has not been quantified. In this study, we measured the starch and sugar contents and analyzed the transcriptome profiles of SRs harvested from sweet potatoes with high, medium, and extremely low starch contents, at five developmental stages [65, 80, 95, 110, and 125 days after transplanting (DAP)]. We found that differences in both water content and starch accumulation in the dry matter affect the starch content of SRs in different sweet potato genotypes. Based on transcriptome sequencing data, we assembled 112336 unigenes, and identified several differentially expressed genes (DEGs) involved in starch and sucrose metabolism, and revealed the transcriptional regulatory network controlling starch and sucrose metabolism in sweet potato SRs. Correlation analysis between expression patterns and starch and sugar contents suggested that the sugar–starch conversion steps catalyzed by sucrose synthase (SuSy) and UDP-glucose pyrophosphorylase (UGPase) may be essential for starch accumulation in the dry matter of SRs, and IbβFRUCT2, a vacuolar acid invertase, might also be a key regulator of starch content in the SRs. Our results provide valuable resources for future investigations aimed at deciphering the molecular mechanisms determining the starch properties of sweet potato SRs. PMID:28690616

Physiology and toxicity of fluoride.

PubMed

Dhar, Vineet; Bhatnagar, Maheep

2009-01-01

Fluoride has been described as an essential element needed for normal development and growth of animals and extremely useful for human beings. Fluoride is abundant in the environment and the main source of fluoride to humans is drinking water. It has been proved to be beneficial in recommended doses, and at the same time its toxicity at higher levels has also been well established. Fluoride gets accumulated in hard tissues of the body and has been know to play an important role in mineralization of bone and teeth. At high levels it has been known to cause dental and skeletal fluorosis. There are suggested effects of very high levels of fluoride on various body organs and genetic material. The purpose of this paper is to review the various aspects of fluoride and its importance in human life.

Landslides in West Coast Metropolitan Areas: The Role of Extreme Weather Events

NASA Technical Reports Server (NTRS)

Biasutti, Michela; Seager, Richard; Kirschbaum, Dalia B.

2016-01-01

Rainfall-induced landslides represent a pervasive issue in areas where extreme rainfall intersects complex terrain. A farsighted management of landslide risk requires assessing how landslide hazard will change in coming decades and thus requires, inter alia, that we understand what rainfall events are most likely to trigger landslides and how global warming will affect the frequency of such weather events. We take advantage of 9 years of landslide occurrence data compiled by collating Google news reports and of a high-resolution satellite-based daily rainfall data to investigate what weather triggers landslide along the West Coast US. We show that, while this landslide compilation cannot provide consistent and widespread monitoring everywhere, it captures enough of the events in the major urban areas that it can be used to identify the relevant relationships between landslides and rainfall events in Puget Sound, the Bay Area, and greater Los Angeles. In all these regions, days that recorded landslides have rainfall distributions that are skewed away from dry and low-rainfall accumulations and towards heavy intensities. However, large daily accumulation is the main driver of enhanced hazard of landslides only in Puget Sound. There, landslide are often clustered in space and time and major events are primarily driven by synoptic scale variability, namely "atmospheric rivers" of high humidity air hitting anywhere along the West Coast, and the interaction of frontal system with the coastal orography. The relationship between landslide occurrences and daily rainfall is less robust in California, where antecedent precipitation (in the case of the Bay area) and the peak intensity of localized downpours at sub-daily time scales (in the case of Los Angeles) are key factors not captured by the same-day accumulations. Accordingly, we suggest that the assessment of future changes in landslide hazard for the entire the West Coast requires consideration of future changes in the occurrence and intensity of atmospheric rivers, in their duration and clustering, and in the occurrence of short-duration (sub-daily) extreme rainfall as well. Major regional landslide events, in which multiple occurrences are recorded in the catalog for the same day, are too rare to allow a statistical characterization of their triggering events, but a case study analysis indicates that a variety of synoptic-scale events can be involved, including not only atmospheric rivers but also broader cold- and warm-front precipitation. That a news-based catalog of landslides is accurate enough to allow the identification of different landslide/ rainfall relationships in the major urban areas along the US West Coast suggests that this technology can potentially be used for other English-language cities and could become an even more powerful tool if expanded to other languages and non-traditional news sources, such as social media.

Nitrogen accumulation and partitioning in a High Arctic tundra ecosystem from extreme atmospheric N deposition events.

PubMed

Choudhary, Sonal; Blaud, Aimeric; Osborn, A Mark; Press, Malcolm C; Phoenix, Gareth K

2016-06-01

Arctic ecosystems are threatened by pollution from recently detected extreme atmospheric nitrogen (N) deposition events in which up to 90% of the annual N deposition can occur in just a few days. We undertook the first assessment of the fate of N from extreme deposition in High Arctic tundra and are presenting the results from the whole ecosystem (15)N labelling experiment. In 2010, we simulated N depositions at rates of 0, 0.04, 0.4 and 1.2 g Nm(-2)yr(-1), applied as (15)NH4(15)NO3 in Svalbard (79(°)N), during the summer. Separate applications of (15)NO3(-) and (15)NH4(+) were also made to determine the importance of N form in their retention. More than 95% of the total (15)N applied was recovered after one growing season (~90% after two), demonstrating a considerable capacity of Arctic tundra to retain N from these deposition events. Important sinks for the deposited N, regardless of its application rate or form, were non-vascular plants>vascular plants>organic soil>litter>mineral soil, suggesting that non-vascular plants could be the primary component of this ecosystem to undergo measurable changes due to N enrichment from extreme deposition events. Substantial retention of N by soil microbial biomass (70% and 39% of (15)N in organic and mineral horizon, respectively) during the initial partitioning demonstrated their capacity to act as effective buffers for N leaching. Between the two N forms, vascular plants (Salix polaris) in particular showed difference in their N recovery, incorporating four times greater (15)NO3(-) than (15)NH4(+), suggesting deposition rich in nitrate will impact them more. Overall, these findings show that despite the deposition rates being extreme in statistical terms, biologically they do not exceed the capacity of tundra to sequester pollutant N during the growing season. Therefore, current and future extreme events may represent a major source of eutrophication. Crown Copyright © 2016. Published by Elsevier B.V. All rights reserved.

Prostate-Specific Membrane Antigen Expression in Distal Radius Fracture.

PubMed

Hoberück, Sebastian; Michler, Enrico; Kaiser, Daniel; Röhnert, Anne; Zöphel, Klaus; Kotzerke, Jörg

2018-06-12

A 79-year old man with prostate cancer under active surveillance for 5 years was referred for a PSMA-PET/MRI for re-evaluation because of a rising prostate-specific antigen value. PET/MRI revealed a ribbonlike tracer accumulation in a healing fracture of the distal radius. This case illustrates that PSMA expression may occur in healing bone fractures in the distal radius. It can be assumed that benign causes of tracer accumulations in the upper extremities are missed in PET/CT due to elevated position of the arms during image acquisition.

Significant influences of global mean temperature and ENSO on extreme rainfall over Southeast Asia

NASA Astrophysics Data System (ADS)

Villafuerte, Marcelino, II; Matsumoto, Jun

2014-05-01

Along with the increasing concerns on the consequences of global warming, and the accumulating records of disaster related to heavy rainfall events in Southeast Asia, this study investigates whether a direct link can be detected between the rising global mean temperature, as well as the El Niño-Southern Oscillation (ENSO), and extreme rainfall over the region. The maximum likelihood modeling that allows incorporating covariates on the location parameter of the generalized extreme value (GEV) distribution is employed. The GEV model is fitted to annual and seasonal rainfall extremes, which were taken from a high-resolution gauge-based gridded daily precipitation data covering a span of 57 years (1951-2007). Nonstationarities in extreme rainfall are detected over the central parts of Indochina Peninsula, eastern coasts of central Vietnam, northwest of the Sumatra Island, inland portions of Borneo Island, and on the northeastern and southwestern coasts of the Philippines. These nonstationarities in extreme rainfall are directly linked to near-surface global mean temperature and ENSO. In particular, the study reveals that a kelvin increase in global mean temperature anomaly can lead to an increase of 30% to even greater than 45% in annual maximum 1-day rainfall, which were observed pronouncedly over central Vietnam, southern coast of Myanmar, northwestern sections of Thailand, northwestern tip of Sumatra, central portions of Malaysia, and the Visayas island in central Philippines. Furthermore, a pronounced ENSO influence manifested on the seasonal maximum 1-day rainfall; a northward progression of 10%-15% drier condition over Southeast Asia as the El Niño develops from summer to winter is revealed. It is important therefore, to consider the results obtained here for water resources management as well as for adaptation planning to minimize the potential adverse impact of global warming, particularly on extreme rainfall and its associated flood risk over the region. Acknowledgment: This study is supported by the Tokyo Metropolitan Government through its AHRF program.

Warmest extreme year in U.S. history alters thermal requirements for tree phenology.

PubMed

Carter, Jacob M; Orive, Maria E; Gerhart, Laci M; Stern, Jennifer H; Marchin, Renée M; Nagel, Joane; Ward, Joy K

2017-04-01

The frequency of extreme warm years is increasing across the majority of the planet. Shifts in plant phenology in response to extreme years can influence plant survival, productivity, and synchrony with pollinators/herbivores. Despite extensive work on plant phenological responses to climate change, little is known about responses to extreme warm years, particularly at the intraspecific level. Here we investigate 43 populations of white ash trees (Fraxinus americana) from throughout the species range that were all grown in a common garden. We compared the timing of leaf emergence during the warmest year in U.S. history (2012) with relatively non-extreme years. We show that (a) leaf emergence among white ash populations was accelerated by 21 days on average during the extreme warm year of 2012 relative to non-extreme years; (b) rank order for the timing of leaf emergence was maintained among populations across extreme and non-extreme years, with southern populations emerging earlier than northern populations; (c) greater amounts of warming units accumulated prior to leaf emergence during the extreme warm year relative to non-extreme years, and this constrained the potential for even earlier leaf emergence by an average of 9 days among populations; and (d) the extreme warm year reduced the reliability of a relevant phenological model for white ash by producing a consistent bias toward earlier predicted leaf emergence relative to observations. These results demonstrate a critical need to better understand how extreme warm years will impact tree phenology, particularly at the intraspecific level.

Microbial Cells as Biosorbents for Heavy Metals: Accumulation of Uranium by Saccharomyces cerevisiae and Pseudomonas aeruginosa

PubMed Central

Strandberg, Gerald W.; Shumate, Starling E.; Parrott, John R.

1981-01-01

Uranium accumulated extracellularly on the surfaces of Saccharomyces cerevisiae cells. The rate and extent of accumulation were subject to environmental parameters, such as pH, temperature, and interference by certain anions and cations. Uranium accumulation by Pseudomonas aeruginosa occurred intracellularly and was extremely rapid (<10 s), and no response to environmental parameters could be detected. Metabolism was not required for metal uptake by either organism. Cell-bound uranium reached a concentration of 10 to 15% of the dry cell weight, but only 32% of the S. cerevisiae cells and 44% of the P. aeruginosa cells within a given population possessed visible uranium deposits when examined by electron microscopy. Rates of uranium uptake by S. cerevisiae were increased by chemical pretreatment of the cells. Uranium could be removed chemically from S. cerevisiae cells, and the cells could then be reused as a biosorbent. Images PMID:16345691

Autophagy sustains the survival of human pancreatic cancer PANC-1 cells under extreme nutrient deprivation conditions.

PubMed

Kim, Sang Eun; Park, Hye-Jin; Jeong, Hye Kyoung; Kim, Mi-Jung; Kim, Minyeong; Bae, Ok-Nam; Baek, Seung-Hoon

2015-07-31

Pancreatic ductal adenocarcinomas are an extremely aggressive and devastating type of cancer with high mortality. Given the dense stroma and poor vascularization, accessibility to nutrients is limited in the tumor microenvironment. Here, we aimed to elucidate the role of autophagy in promoting the survival of human pancreatic cancer PANC-1 cells exposed to nutrient-deprived media (NDM) lacking glucose, amino acids, and serum. NDM inhibited Akt activity and phosphorylation of p70 S6K, and induced AMPK activation and mitochondrial depolarization. NDM also time-dependently increased LC3-II accumulation, number of GFP-LC3 puncta, and colocalization between GFP-LC3 and lysosomes. These results suggested that autophagy was progressively activated through Akt- and AMPK-mTOR pathway in nutrient-deficient PANC-1 cells. Autophagy inhibitors (chloroquine and wortmannin) or silencing of Atg5 augmented PANC-1 cell death in NDM. In cells exposed to NDM, chloroquine and wortmannin induced apoptosis and Z-VAD-fmk inhibited cytotoxicity of these inhibitors. These data demonstrate that autophagy is anti-apoptotic and sustains the survival of PANC-1 cells following extreme nutrient deprivation. Autophagy modulation may be a viable therapeutic option for cancer cells located in the core of solid tumors with a nutrient-deficient microenvironment. Copyright © 2015 Elsevier Inc. All rights reserved.

Accelerated Mutation Accumulation in Asexual Lineages of a Freshwater Snail

PubMed Central

Neiman, Maurine; Hehman, Gery; Miller, Joseph T.; Logsdon, John M.; Taylor, Douglas R.

2010-01-01

Sexual reproduction is both extremely costly and widespread relative to asexual reproduction, meaning that it must also confer profound advantages in order to persist. One theorized benefit of sex is that it facilitates the clearance of harmful mutations, which would accumulate more rapidly in the absence of recombination. The extent to which ineffective purifying selection and mutation accumulation are direct consequences of asexuality and whether the accelerated buildup of harmful mutations in asexuals can occur rapidly enough to maintain sex within natural populations, however, remain as open questions. We addressed key components of these questions by estimating the rate of mutation accumulation in the mitochondrial genomes of multiple sexual and asexual representatives of Potamopyrgus antipodarum, a New Zealand snail characterized by mixed sexual/asexual populations. We found that increased mutation accumulation is associated with asexuality and occurs rapidly enough to be detected in recently derived asexual lineages of P. antipodarum. Our results demonstrate that increased mutation accumulation in asexuals can differentially affect coexisting and ecologically similar sexual and asexual lineages. The accelerated rate of mutation accumulation observed in asexual P. antipodarum provides some of the most direct evidence to date for a link between asexuality and mutation accumulation and implies that mutational buildup could be rapid enough to contribute to the short-term evolutionary mechanisms that favor sexual reproduction. PMID:19995828

Survival of cryogenically-stored dormant apple buds: A 20 year assessment

USDA-ARS?s Scientific Manuscript database

Cryobiologists assume that the extreme low temperatures of liquid nitrogen stop chemical and physical reactions that lead to sample aging and loss of viability. This assumption, based on extrapolations of temperature – reaction kinetic relationships, is not completely supported by accumulating evid...

Attributable Human-Induced Changes in the Likelihood and Magnitude of the Observed Extreme Precipitation during Hurricane Harvey

DOE PAGES

Risser, Mark D.; Wehner, Michael F.

2017-12-28

Record rainfall amounts were recorded during Hurricane Harvey in the Houston, Texas, area, leading to widespread flooding. We analyze observed precipitation from the Global Historical Climatology Network with a covariate-based extreme value statistical analysis, accounting for both the external influence of global warming and the internal influence of El Niño–Southern Oscillation. We find that human-induced climate change likely increased the chances of the observed precipitation accumulations during Hurricane Harvey in the most affected areas of Houston by a factor of at least 3.5. Further, precipitation accumulations in these areas were likely increased by at least 18.8% (best estimate of 37.7%),more » which is larger than the 6–7% associated with an attributable warming of 1°C in the Gulf of Mexico and Clausius-Clapeyron scaling. Thus, in a Granger causality sense, these statements provide lower bounds on the impact of climate change and motivate further attribution studies using dynamical climate models.« less

Attributable Human-Induced Changes in the Likelihood and Magnitude of the Observed Extreme Precipitation during Hurricane Harvey

DOE Office of Scientific and Technical Information (OSTI.GOV)

Risser, Mark D.; Wehner, Michael F.

Record rainfall amounts were recorded during Hurricane Harvey in the Houston, Texas, area, leading to widespread flooding. We analyze observed precipitation from the Global Historical Climatology Network with a covariate-based extreme value statistical analysis, accounting for both the external influence of global warming and the internal influence of El Niño–Southern Oscillation. We find that human-induced climate change likely increased the chances of the observed precipitation accumulations during Hurricane Harvey in the most affected areas of Houston by a factor of at least 3.5. Further, precipitation accumulations in these areas were likely increased by at least 18.8% (best estimate of 37.7%),more » which is larger than the 6–7% associated with an attributable warming of 1°C in the Gulf of Mexico and Clausius-Clapeyron scaling. Thus, in a Granger causality sense, these statements provide lower bounds on the impact of climate change and motivate further attribution studies using dynamical climate models.« less

Attributable Human-Induced Changes in the Likelihood and Magnitude of the Observed Extreme Precipitation during Hurricane Harvey

NASA Astrophysics Data System (ADS)

Risser, Mark D.; Wehner, Michael F.

2017-12-01

Record rainfall amounts were recorded during Hurricane Harvey in the Houston, Texas, area, leading to widespread flooding. We analyze observed precipitation from the Global Historical Climatology Network with a covariate-based extreme value statistical analysis, accounting for both the external influence of global warming and the internal influence of El Niño-Southern Oscillation. We find that human-induced climate change likely increased the chances of the observed precipitation accumulations during Hurricane Harvey in the most affected areas of Houston by a factor of at least 3.5. Further, precipitation accumulations in these areas were likely increased by at least 18.8% (best estimate of 37.7%), which is larger than the 6-7% associated with an attributable warming of 1°C in the Gulf of Mexico and Clausius-Clapeyron scaling. In a Granger causality sense, these statements provide lower bounds on the impact of climate change and motivate further attribution studies using dynamical climate models.

Carbon cycling in high-latitude ecosystems

NASA Technical Reports Server (NTRS)

Townsend, Alan; Frolking, Stephen; Holland, Elizabeth

1992-01-01

The carbon-rich soils and peatlands of high-latitude ecosystems could substantially influence atmospheric concentrations of CO2 and CH4 in a changing climate. Currently, cold, often waterlogged conditions retard decomposition, and release of carbon back to the atmosphere may be further slowed by physical protection of organic matter in permafrost. As a result, many northern ecosystems accumulate carbon over time (Billings et al., 1982; Poole and Miller, 1982), and although such rates of accumulation are low, thousands of years of development have left Arctic ecosystems with an extremely high soil carbon content; Schlesinger's (1984) average value of 20.4 kg C/m(sup 2) leads to a global estimate of 163 x 10(exp 15) g C. All GCM simulations of a doubled CO2 climate predict the greatest warming to occur in the polar regions (Dickinson, 1986; Mitchell, 1989). Given the extensive northern carbon pools and the strong sensitivity of decomposition processes to temperature, even a slight warming of the soil could dramatically alter the carbon balance of Arctic ecosystems. If warming accelerates rates of decomposition more than rates of primary production, a sizeable additional accumulation of CO2 in the atmosphere could occur. Furthermore, CH4 produced in anaerobic soils and peatlands of the Arctic already composes a good percentage of the global efflux (Cicerone and Oremlund, 1988); if northern soils become warmer and wetter as a whole, CH4 emissions could dramatically rise. A robust understanding of the primary controls of carbon fluxes in Arctic ecosystems is critical. As a framework for a systematic examination of these controls, we discussed a conceptual model of regional-scale Arctic carbon turnover, including CH4 production, and based upon the Century soil organic matter model.

A manganese-rich environment supports superoxide dismutase activity in a Lyme disease pathogen, Borrelia burgdorferi.

PubMed

Aguirre, J Dafhne; Clark, Hillary M; McIlvin, Matthew; Vazquez, Christine; Palmere, Shaina L; Grab, Dennis J; Seshu, J; Hart, P John; Saito, Mak; Culotta, Valeria C

2013-03-22

The Lyme disease pathogen Borrelia burgdorferi represents a novel organism in which to study metalloprotein biology in that this spirochete has uniquely evolved with no requirement for iron. Not only is iron low, but we show here that B. burgdorferi has the capacity to accumulate remarkably high levels of manganese. This high manganese is necessary to activate the SodA superoxide dismutase (SOD) essential for virulence. Using a metalloproteomic approach, we demonstrate that a bulk of B. burgdorferi SodA directly associates with manganese, and a smaller pool of inactive enzyme accumulates as apoprotein. Other metalloproteins may have similarly adapted to using manganese as co-factor, including the BB0366 aminopeptidase. Whereas B. burgdorferi SodA has evolved in a manganese-rich, iron-poor environment, the opposite is true for Mn-SODs of organisms such as Escherichia coli and bakers' yeast. These Mn-SODs still capture manganese in an iron-rich cell, and we tested whether the same is true for Borrelia SodA. When expressed in the iron-rich mitochondria of Saccharomyces cerevisiae, B. burgdorferi SodA was inactive. Activity was only possible when cells accumulated extremely high levels of manganese that exceeded cellular iron. Moreover, there was no evidence for iron inactivation of the SOD. B. burgdorferi SodA shows strong overall homology with other members of the Mn-SOD family, but computer-assisted modeling revealed some unusual features of the hydrogen bonding network near the enzyme's active site. The unique properties of B. burgdorferi SodA may represent adaptation to expression in the manganese-rich and iron-poor environment of the spirochete.

Role of small-sized copepods in the lipid-driven Arctic marine food web

NASA Astrophysics Data System (ADS)

Daase, M.; Boissonnot, L.; Graeve, M.; Søreide, J.; Niehoff, B.

2016-02-01

Despite of the low individual biomass of small-sized copepods such as the calanoid Pseudocalanus minutus and the cyclopoid Oithona similis, they are extremely numerous which make them an important trophic component in Arctic marine ecosystems. Due to the strong seasonality in light and thus primary production and food availability, the accumulation of lipid reserves is a key feature in Arctic marine ecosystems. However, very few studies exist on the lipid biochemistry of small copepods such as P. minutus and O. similis. In order to investigate the importance of these species in terms of transfer of lipids from primary production to higher trophic levels, feeding experiments were conducted, based on animals from Billefjorden, a high-Arctic fjord in Svalbard, Norway. A mixture of 13C labeled flagellates and diatoms was fed to the animals and the transfer and assimilation of lipid carbon, fatty acids and fatty alcohols was analyzed with gas chromatography-IRMS technique (CSIA). The results revealed that both species were incorporating dietary lipids in high quantities. The highest accumulation occurred in P. minutus in which 54.4% of the lipids were exchanged after 21 days, whereas 9.4% were assimilated in O. similis. Hence, at least this amount of carbon was used for metabolism and replaced by feeding. The lipid composition of the copepods did not reflect exactly the algal lipids, and differed between P. minutus and O. similis. Our results suggested intrinsic preferences in the accumulation of particular fatty acids, probably related to species-specific body requirements. This emphasizes the importance of also food quality in Arctic marine systems. Due to the relatively high lipid turnover rates in particularly in P. minutus, also small copepods are important drivers of the lipid-driven Arctic marine food web.

Earth-like aqueous debris-flow activity on Mars at high orbital obliquity in the last million years

PubMed Central

de Haas, T.; Hauber, E.; Conway, S. J.; van Steijn, H.; Johnsson, A.; Kleinhans, M. G.

2015-01-01

Liquid water is currently extremely rare on Mars, but was more abundant during periods of high obliquity in the last few millions of years. This is testified by the widespread occurrence of mid-latitude gullies: small catchment-fan systems. However, there are no direct estimates of the amount and frequency of liquid water generation during these periods. Here we determine debris-flow size, frequency and associated water volumes in Istok crater, and show that debris flows occurred at Earth-like frequencies during high-obliquity periods in the last million years on Mars. Results further imply that local accumulations of snow/ice within gullies were much more voluminous than currently predicted; melting must have yielded centimetres of liquid water in catchments; and recent aqueous activity in some mid-latitude craters was much more frequent than previously anticipated. PMID:26102485

Understanding the Impacts of Climate and Hydrologic Extremes on Diarrheal Diseases in Southwestern Amazon

NASA Astrophysics Data System (ADS)

Fonseca, P. A. M.

2015-12-01

Bacterial diarrheal diseases have a high incidence rate during and after flooding episodes. In the Brazilian Amazon, flood extreme events have become more frequent, leading to high incidence rates for infant diarrhea. In this study we aimed to find a statistical association between rainfall, river levels and diarrheal diseases in children under 5, in the river Acre basin, in the State of Acre (Brazil). We also aimed to identify the time-lag and annual season of extreme rainfall and flooding in different cities in the water basin. The results using Tropical Rainfall Measuring Mission (TRMM) Satellite rainfall data show robustness of these estimates against observational stations on-ground. The Pearson coefficient correlation results (highest 0.35) indicate a time-lag, up to 4 days in three of the cities in the water-basin. In addition, a correlation was also tested between monthly accumulated rainfall and the diarrheal incidence during the rainy season (DJF). Correlation results were higher, especially in Acrelândia (0.7) and Brasiléia and Epitaciolândia (0.5). The correlation between water level monthly averages and diarrheal diseases incidence was 0.3 and 0.5 in Brasiléia and Epitaciolândia. The time-lag evidence found in this paper is critical to inform stakeholders, local populations and civil defense authorities about the time available for preventive and adaptation measures between extreme rainfall and flooding events in vulnerable cities. This study was part of a pilot application in the state of Acre of the PULSE-Brazil project (http://www.pulse-brasil.org/tool/), an interface of climate, environmental and health data to support climate adaptation. The next step of this research is to expand the analysis to other climate variables on diarrheal diseases across the whole Brazilian Amazon Basin and estimate the relative risk (RR) of a child getting sick. A statistical model will estimate RR based on the observed values and seasonal forecasts (higher accuracy for the Amazon region) will be used so the government can be prepared for extreme climate events forecasted. It is expected that these results can be helpful during and post extreme events to improve health surveillance preparedness and better allocate available results in adapting vulnerable cities to climate extreme events.

Condenser for extreme-UV lithography with discharge source

DOEpatents

Sweatt, William C.; Kubiak, Glenn D.

2001-01-01

Condenser system, for use with a ringfield camera in projection lithography, employs quasi grazing-incidence collector mirrors that are coated with a suitable reflective metal such as ruthenium to collect radiation from a discharge source to minimize the effect of contaminant accumulation on the collecting mirrors.

Mass Balance of the Greenland Ice Sheet at High Elevations.

PubMed

Thomas; Akins; Csatho; Fahnestock; Gogineni; Kim; Sonntag

2000-07-21

Comparison of ice discharge from higher elevation areas of the entire Greenland Ice Sheet with total snow accumulation gives estimates of ice thickening rates over the past few decades. On average, the region has been in balance, but with thickening of 21 centimeters per year in the southwest and thinning of 30 centimeters per year in the southeast. The north of the ice sheet shows less variability, with average thickening of 2 centimeters per year in the northeast and thinning of about 5 centimeters per year in the northwest. These results agree well with those from repeated altimeter surveys, except in the extreme south, where we find substantially higher rates of both thickening and thinning.

Content of selected elements in Boletus badius fruiting bodies growing in extremely polluted wastes.

PubMed

Mleczek, Mirosław; Siwulski, Marek; Mikołajczak, Patrycja; Gąsecka, Monika; Sobieralski, Krzysztof; Szymańczyk, Mateusz; Goliński, Piotr

2015-01-01

The aim of the study was to analyse levels of 17 trace elements and 5 major minerals in 11 Boletus badius fruiting bodies able to grow in extremely polluted waste (flotation tailings) and polluted soil in southern Poland. The presented data widen the limited literature data about the abilities of wild-growing mushroom species to grow on heavily contaminated substrates. Content of elements in waste, soil and mushrooms was analysed by flame atomic absorption spectrometry (FAAS) and cold vapour atomic absorption spectrometry (CVAAS - Hg). The industrial areas differed greatly as regards the content of elements in flotation tailings and soil; therefore differences in Ag, Ba, Cd, Co, Fe, Mo, Ni, Pb, Ca, K, Mg, Na and P accumulation in mushrooms were observed. The highest contents of elements in mushrooms were observed for: As, Al, Cu and Zn (86 ± 28, 549 ± 116, 341 ± 59 and 506 ± 40 mg kg(-1) dry matter, respectively). Calculated bioconcentration factor (BCF) values were higher than 1 for Al (15.1-16.9), Fe (10.6-24.4) and Hg (10.2-16.4) only. The main value of the presented results is the fact that one of the common wild-growing mushroom species was able to grow on flotation tailings containing over 22 g kg(-1) of As and, additionally, effective accumulation of other elements was observed. In view of the high content of the majority of analysed elements in fruiting bodies, edible mushrooms from such polluted areas are nonconsumable.

Adaptation strategies of endolithic chlorophototrophs to survive the hyperarid and extreme solar radiation environment of the Atacama Desert

PubMed Central

Wierzchos, Jacek; DiRuggiero, Jocelyne; Vítek, Petr; Artieda, Octavio; Souza-Egipsy, Virginia; Škaloud, Pavel; Tisza, Michel; Davila, Alfonso F.; Vílchez, Carlos; Garbayo, Inés; Ascaso, Carmen

2015-01-01

The Atacama Desert, northern Chile, is one of the driest deserts on Earth and, as such, a natural laboratory to explore the limits of life and the strategies evolved by microorganisms to adapt to extreme environments. Here we report the exceptional adaptation strategies of chlorophototrophic and eukaryotic algae, and chlorophototrophic and prokaryotic cyanobacteria to the hyperarid and extremely high solar radiation conditions occurring in this desert. Our approach combined several microscopy techniques, spectroscopic analytical methods, and molecular analyses. We found that the major adaptation strategy was to avoid the extreme environmental conditions by colonizing cryptoendolithic, as well as, hypoendolithic habitats within gypsum deposits. The cryptoendolithic colonization occurred a few millimeters beneath the gypsum surface and showed a succession of organized horizons of algae and cyanobacteria, which has never been reported for endolithic microbial communities. The presence of cyanobacteria beneath the algal layer, in close contact with sepiolite inclusions, and their hypoendolithic colonization suggest that occasional liquid water might persist within these sub-microhabitats. We also identified the presence of abundant carotenoids in the upper cryptoendolithic algal habitat and scytonemin in the cyanobacteria hypoendolithic habitat. This study illustrates that successful lithobiontic microbial colonization at the limit for microbial life is the result of a combination of adaptive strategies to avoid excess solar irradiance and extreme evapotranspiration rates, taking advantage of the complex structural and mineralogical characteristics of gypsum deposits—conceptually called “rock's habitable architecture.” Additionally, self-protection by synthesis and accumulation of secondary metabolites likely produces a shielding effect that prevents photoinhibition and lethal photooxidative damage to the chlorophototrophs, representing another level of adaptation. PMID:26441871

Adaptation strategies of endolithic chlorophototrophs to survive the hyperarid and extreme solar radiation environment of the Atacama Desert.

PubMed

Wierzchos, Jacek; DiRuggiero, Jocelyne; Vítek, Petr; Artieda, Octavio; Souza-Egipsy, Virginia; Škaloud, Pavel; Tisza, Michel; Davila, Alfonso F; Vílchez, Carlos; Garbayo, Inés; Ascaso, Carmen

2015-01-01

The Atacama Desert, northern Chile, is one of the driest deserts on Earth and, as such, a natural laboratory to explore the limits of life and the strategies evolved by microorganisms to adapt to extreme environments. Here we report the exceptional adaptation strategies of chlorophototrophic and eukaryotic algae, and chlorophototrophic and prokaryotic cyanobacteria to the hyperarid and extremely high solar radiation conditions occurring in this desert. Our approach combined several microscopy techniques, spectroscopic analytical methods, and molecular analyses. We found that the major adaptation strategy was to avoid the extreme environmental conditions by colonizing cryptoendolithic, as well as, hypoendolithic habitats within gypsum deposits. The cryptoendolithic colonization occurred a few millimeters beneath the gypsum surface and showed a succession of organized horizons of algae and cyanobacteria, which has never been reported for endolithic microbial communities. The presence of cyanobacteria beneath the algal layer, in close contact with sepiolite inclusions, and their hypoendolithic colonization suggest that occasional liquid water might persist within these sub-microhabitats. We also identified the presence of abundant carotenoids in the upper cryptoendolithic algal habitat and scytonemin in the cyanobacteria hypoendolithic habitat. This study illustrates that successful lithobiontic microbial colonization at the limit for microbial life is the result of a combination of adaptive strategies to avoid excess solar irradiance and extreme evapotranspiration rates, taking advantage of the complex structural and mineralogical characteristics of gypsum deposits-conceptually called "rock's habitable architecture." Additionally, self-protection by synthesis and accumulation of secondary metabolites likely produces a shielding effect that prevents photoinhibition and lethal photooxidative damage to the chlorophototrophs, representing another level of adaptation.

Mechanism of Radiation Damage Reduction in Equiatomic Multicomponent Single Phase Alloys.

PubMed

Granberg, F; Nordlund, K; Ullah, Mohammad W; Jin, K; Lu, C; Bei, H; Wang, L M; Djurabekova, F; Weber, W J; Zhang, Y

2016-04-01

Recently a new class of metal alloys, of single-phase multicomponent composition at roughly equal atomic concentrations ("equiatomic"), have been shown to exhibit promising mechanical, magnetic, and corrosion resistance properties, in particular, at high temperatures. These features make them potential candidates for components of next-generation nuclear reactors and other high-radiation environments that will involve high temperatures combined with corrosive environments and extreme radiation exposure. In spite of a wide range of recent studies of many important properties of these alloys, their radiation tolerance at high doses remains unexplored. In this work, a combination of experimental and modeling efforts reveals a substantial reduction of damage accumulation under prolonged irradiation in single-phase NiFe and NiCoCr alloys compared to elemental Ni. This effect is explained by reduced dislocation mobility, which leads to slower growth of large dislocation structures. Moreover, there is no observable phase separation, ordering, or amorphization, pointing to a high phase stability of this class of alloys.

Mechanism of Radiation Damage Reduction in Equiatomic Multicomponent Single Phase Alloys

NASA Astrophysics Data System (ADS)

Granberg, F.; Nordlund, K.; Ullah, Mohammad W.; Jin, K.; Lu, C.; Bei, H.; Wang, L. M.; Djurabekova, F.; Weber, W. J.; Zhang, Y.

2016-04-01

Recently a new class of metal alloys, of single-phase multicomponent composition at roughly equal atomic concentrations ("equiatomic"), have been shown to exhibit promising mechanical, magnetic, and corrosion resistance properties, in particular, at high temperatures. These features make them potential candidates for components of next-generation nuclear reactors and other high-radiation environments that will involve high temperatures combined with corrosive environments and extreme radiation exposure. In spite of a wide range of recent studies of many important properties of these alloys, their radiation tolerance at high doses remains unexplored. In this work, a combination of experimental and modeling efforts reveals a substantial reduction of damage accumulation under prolonged irradiation in single-phase NiFe and NiCoCr alloys compared to elemental Ni. This effect is explained by reduced dislocation mobility, which leads to slower growth of large dislocation structures. Moreover, there is no observable phase separation, ordering, or amorphization, pointing to a high phase stability of this class of alloys.

Mechanism of Radiation Damage Reduction in Equiatomic Multicomponent Single Phase Alloys

DOE PAGES

Granberg, F.; Nordlund, K.; Ullah, Mohammad W.; ...

2016-04-01

Recently a new class of metal alloys, of single-phase multicomponent composition at roughly equal atomic concentrations (“equiatomic”), have been shown to exhibit promising mechanical, magnetic, and corrosion resistance properties, in particular, at high temperatures. These features make them potential candidates for components of next-generation nuclear reactors and other high-radiation environments that will involve high temperatures combined with corrosive environments and extreme radiation exposure. In spite of a wide range of recent studies of many important properties of these alloys, their radiation tolerance at high doses remains unexplored. In this work, a combination of experimental and modeling efforts reveals a substantialmore » reduction of damage accumulation under prolonged irradiation in single-phase NiFe and NiCoCr alloys compared to elemental Ni. This effect is explained by reduced dislocation mobility, which leads to slower growth of large dislocation structures. Finally and moreover, there is no observable phase separation, ordering, or amorphization, pointing to a high phase stability of this class of alloys.« less

An extremely high dietary iodide supply forestalls severe hypothyroidism in Na+/I- symporter (NIS) knockout mice.

PubMed

Ferrandino, Giuseppe; Kaspari, Rachel R; Reyna-Neyra, Andrea; Boutagy, Nabil E; Sinusas, Albert J; Carrasco, Nancy

2017-07-13

The sodium/iodide symporter (NIS) mediates active iodide (I - ) accumulation in the thyroid, the first step in thyroid hormone (TH) biosynthesis. Mutations in the SLC5A5 gene encoding NIS that result in a non-functional protein lead to congenital hypothyroidism due to I - transport defect (ITD). ITD is a rare autosomal disorder that, if not treated promptly in infancy, can cause mental retardation, as the TH decrease results in improper development of the nervous system. However, in some patients, hypothyroidism has been ameliorated by unusually large amounts of dietary I - . Here we report the first NIS knockout (KO) mouse model, obtained by targeting exons 6 and 7 of the Slc5a5 gene. In NIS KO mice, in the thyroid, stomach, and salivary gland, NIS is absent, and hence there is no active accumulation of the NIS substrate pertechnetate ( 99m TcO 4 - ). NIS KO mice showed undetectable serum T 4 and very low serum T 3 levels when fed a diet supplying the minimum I - requirement for rodents. These hypothyroid mice displayed oxidative stress in the thyroid, but not in the brown adipose tissue or liver. Feeding the mice a high-I - diet partially rescued TH biosynthesis, demonstrating that, at high I - concentrations, I - enters the thyroid through routes other than NIS.

Charge Density Dependent Hole Mobility and Density of States Throughout the Entire Finite Potential Window of Conductivity in Ionic Liquid Gated Poly(3-hexylthiophene)

NASA Astrophysics Data System (ADS)

Paulsen, Bryan D.; Frisbie, C. Daniel

2012-02-01

Ionic liquids, used in place of traditional gate dielectric materials, allow for the accumulation of very high 2D and 3D charge densities (>10^14 #/cm^2 and >10^21 #/cm^3 respectively) at low voltage (<5 V). Here we study the electrochemical gating of the benchmark semiconducting polymer poly(3-hexylthiophene) (P3HT) with the ionic liquid 1-ethyl-3-methylimidazolium tris(pentafluoroethyl)trifluorophosphate ([EMI][FAP]). The electrochemical stability of [EMI][FAP] allowed the reproducible accumulation of 2 x 10^21 hole/cm^3, or one hole (and stabilizing anion dopant) per every two thiophene rings. A finite potential/charge density window of high electrical conductivity was observed with hole mobility reaching a maximum of 0.86 cm^2/V s at 0.12 holes per thiophene ring. Displacement current measurements, collected versus a calibrated reference electrode, allowed the mapping of the highly structured and extremely broad density of states of the P3HT/[EMI][FAP] doped composite. Variable temperature and charge density hole transport measurements revealed hole transport to be thermally activated and non-monotonic, displaying a activation energy minimum of ˜20 meV in the region of maximum conductivity and hole mobility. To show the generality of this result, the study was extended to an additional four ionic liquids and three semiconducting polymers.

Exposed to an Accumulation of Burdensome Feelings: Mental Health Nurses' Vulnerability in Everyday Encounters With Seriously Ill Inpatients.

PubMed

Vatne, Solfrid

Seriously mentally ill patients' unusual behavior is considered challenging in caring relationships, but we know little about how this affects mental health nurses' vulnerability. This article uses a phenomenological design inspired by Heidegger's philosophy with the results of fieldwork and reflection groups with 11 nurses on an acute ward. The nurses were exposed to an accumulation of negative emotions, caused by potentially or actually harmful scenarios that were more extreme than those in other nursing contexts. They protected themselves through limit-setting approaches, which conflicted with their standards of building trusting relationships with patients. The feeling of guilt might function as an appeal for authentic practice, but a change in practice requires the use of acknowledgment approaches and the systematic debriefing of accumulated burdensome feelings.

Investigation of potentially toxic heavy metals in different organic wastes used to fertilize market garden crops.

PubMed

Tella, M; Doelsch, E; Letourmy, P; Chataing, S; Cuoq, F; Bravin, M N; Saint Macary, H

2013-01-01

The benefits of using organic waste as fertilizer and soil amendment should be assessed together with the environmental impacts due to the possible presence of heavy metals (HMs). This study involved analysing major element and HM contents in raw and size-fractionated organic wastes (17 sewage sludges and composts) from developed and developing countries. The overall HM concentration pattern showed an asymmetric distribution due to the presence of some wastes with extremely high concentrations. HM concentrations were correlated with the size of cities or farms where the wastes had been produced, and HM were differentiated with respect to their origins (geogenic: Cr-Ni; anthropogenic agricultural and urban: Cu-Zn; anthropogenic urban: Cd-Pb). Size fractionation highlighted Cd, Cu, Zn and Pb accumulation in fine size fractions, while Cr and Ni were accumulated in the coarsest. HM associations with major elements revealed inorganic (Al, Fe, etc.) bearing phases for Cr and Ni, and sulfur or phosphorus species for Cd, Cu Pb and Zn. Copyright © 2012 Elsevier Ltd. All rights reserved.

Internal iron biomineralization in Imperata cylindrica, a perennial grass: chemical composition, speciation and plant localization.

PubMed

Rodríguez, N; Menéndez, N; Tornero, J; Amils, R; de la Fuente, V

2005-03-01

* The analysis of metal distribution in Imperata cylindrica, a perennial grass isolated from the banks of Tinto River (Iberian Pyritic Belt), an extreme acidic environment with high content in metals, has shown a remarkable accumulation of iron. This property has been used to study iron speciation and its distribution among different tissues and structures of the plant. * Mossbauer (MS) and X-ray diffraction (XRD) were used to determine the iron species, scanning electron microscopy (SEM) to locate iron biominerals among plant tissue structures, and energy-dispersive X-ray microanalysis (EDAX), X-ray fluorescence (TXRF) and inductively coupled plasma emission spectroscopy (ICP-MS) to confirm their elemental composition. * The MS spectral analysis indicated that iron accumulated in this plant mainly as jarosite and ferritin. The presence of jarosite was confirmed by XRD and the distribution of both minerals in structures of different tissues was ascertained by SEM-EDAX analysis. * The convergent results obtained by complementary techniques suggest a complex iron management system in I. cylindrica, probably as a consequence of the environmental conditions of its habitat.

Geospatial risk assessment and trace element concentration in reef associated sediments, northern part of Gulf of Mannar biosphere reserve, Southeast Coast of India.

PubMed

Krishnakumar, S; Ramasamy, S; Simon Peter, T; Godson, Prince S; Chandrasekar, N; Magesh, N S

2017-12-15

Fifty two surface sediments were collected from the northern part of the Gulf of Mannar biosphere reserve to assess the geospatial risk of sediments. We found that distribution of organic matter and CaCO 3 distributions were locally controlled by the mangrove litters and fragmented coral debris. In addition, Fe and Mn concentrations in the marine sediments were probably supplied through the riverine input and natural processes. The Geo-accumulation of elements fall under the uncontaminated category except Pb. Lead show a wide range of contamination from uncontaminated-moderately contaminated to extremely contaminated category. The sediment toxicity level of the elements revealed that the majority of the sediments fall under moderately to highly polluted sediments (23.07-28.84%). The grades of potential ecological risk suggest that predominant sediments fall under low to moderate risk category (55.7-32.7%). The accumulation level of trace elements clearly suggests that the coral reef ecosystem is under low to moderate risk. Copyright © 2017 Elsevier Ltd. All rights reserved.

Intellectual and Adaptive Behaviour Functioning in Pantothenate Kinase-Associated Neurodegeneration

ERIC Educational Resources Information Center

Freeman, K.; Gregory, A.; Turner, A.; Blasco, P.; Hogarth, P.; Hayflick, S.

2007-01-01

Background: Pantothenate kinase-associated neurodegeneration (PKAN), an extremely rare autosomal recessive disorder resulting in iron accumulation in the brain, has a diverse phenotypic expression. Based on limited case studies of one or two patients, intellectual impairment is considered part of PKAN. Investigations of cognitive functioning have…

Demonstration of a Catalytic Converter Using a Lawn Mower Engine

ERIC Educational Resources Information Center

Young, Mark A.

2010-01-01

Catalytic conversion is an important tool in environmental-remediation strategies and source removal of pollutants. Because a catalyst is regenerated, the chemistry can be extremely effective for conversion of undesirable pollutant species to less harmful products in situations where the pollutants have accumulated or are being continuously…

It’s good to be big--- Phaeocystis antarctica colony size under the influence of zooplankton grazers

EPA Science Inventory

The haptophyte Phaeocystis antarctica forms extremely dense accumulations in the Ross Sea, Antarctica, and accounts for over 60% of the seasonal primary production. Similar to the Phaeocystis species in the northern hemisphere, P. antarctica exists as solitary cells and mucilagin...

Long-term survival of cryopreserved germplasm: contributing factors and assessments from 30 year old experiments

USDA-ARS?s Scientific Manuscript database

Cryobiologists assume that the extreme low temperatures of liquid nitrogen stop chemical and physical reactions that lead to sample aging and loss of viability. This assumption, based on extrapolations of temperature–reaction kinetic relationships, is not completely supported by accumulating eviden...

IT’S GOOD TO BE BIG—PHAEOCYSTIS ANTARCTICA COLONY SIZE UNDER THE INFLUENCE OF ZOOPLANKTON GRAZERS

EPA Science Inventory

The haptophyte Phaeocystis antarctica forms extremely dense accumulations in the Ross Sea, Antarctica, and accounts for over 60% of the seasonal primary production. Similar to the Phaeocystis species in the northern hemisphere, P. antarctica exists as solitary cells and mucilagin...

Chenier plain genesis explained by feedbacks between waves, mud, and sand

NASA Astrophysics Data System (ADS)

Nardin, William; Fagherazzi, Sergio

2017-04-01

Cheniers are sandy ridges parallel to the coast established by high energy waves. Here we discuss ontogeny of chenier plains through dimensional analysis and numerical results from the morphodynamic model Delft3D-SWAN. Our results show that wave energy and inner-shelf slope play an important role in the formation of chenier plains. In our numerical experiments, waves affect chenier plain development in three ways: by winnowing coarse sediment from the mudflat, by eroding mud and accumulating sand over the beach during extreme wave events. We further show that different sediment characteristics and wave climates can lead to three alternative coastal landscapes: strand plains, mudflats, or the more complex chenier plains. Low inner-shelf slopes are the most favorable for strand plain and chenier plain formation, while high slopes decrease the likelihood of mudflat development and preservation.

Chenier plain development: feedbacks between waves, mud and sand

NASA Astrophysics Data System (ADS)

Nardin, W.; Fagherazzi, S.

2015-12-01

Cheniers are sandy ridges parallel to the coast established by high energy waves. Here we discuss Chenier plains ontogeny through dimensional analysis and numerical results from the morphodynamic model Delft3D-SWAN. Our results show that wave energy and shelf slope play an important role in the formation of Chenier plains. In our numerical experiments waves affect Chenier plain development in three ways: by winnowing sediment from the mudflat, by eroding mud and accumulating sand over the beach during extreme wave events. We further show that different sediment characteristics and wave climates can lead to three alternative coastal landscapes: strand plains, mudflats, or the more complex Chenier plains. Low inner-shelf slopes are the most favorable for strand plain and Chenier plain formation, while high slopes decrease the likelihood of mudflat development and preservation.

Episode of intense chemical weathering during the termination of the 635 Ma Marinoan glaciation.

PubMed

Huang, Kang-Jun; Teng, Fang-Zhen; Shen, Bing; Xiao, Shuhai; Lang, Xianguo; Ma, Hao-Ran; Fu, Yong; Peng, Yongbo

2016-12-27

Cryogenian (∼720-635 Ma) global glaciations (the snowball Earth) represent the most extreme ice ages in Earth's history. The termination of these snowball Earth glaciations is marked by the global precipitation of cap carbonates, which are interpreted to have been driven by intense chemical weathering on continents. However, direct geochemical evidence for the intense chemical weathering in the aftermath of snowball glaciations is lacking. Here, we report Mg isotopic data from the terminal Cryogenian or Marinoan-age Nantuo Formation and the overlying cap carbonate of the basal Doushantuo Formation in South China. A positive excursion of extremely high δ 26 Mg values (+0.56 to +0.95)-indicative of an episode of intense chemical weathering-occurs in the top Nantuo Formation, whereas the siliciclastic component of the overlying Doushantuo cap carbonate has significantly lower δ 26 Mg values (<+0.40), suggesting moderate to low intensity of chemical weathering during cap carbonate deposition. These observations suggest that cap carbonate deposition postdates the climax of chemical weathering, probably because of the suppression of carbonate precipitation in an acidified ocean when atmospheric CO 2 concentration was high. Cap carbonate deposition did not occur until chemical weathering had consumed substantial amounts of atmospheric CO 2 and accumulated high levels of oceanic alkalinity. Our finding confirms intense chemical weathering at the onset of deglaciation but indicates that the maximum weathering predated cap carbonate deposition.

Composition, speciation and distribution of iron minerals in Imperata cylindrica.

PubMed

Amils, Ricardo; de la Fuente, Vicenta; Rodríguez, Nuria; Zuluaga, Javier; Menéndez, Nieves; Tornero, Jesús

2007-05-01

A comparative study of the roots, rhizomes and leaves of an iron hyperaccumulator plant, Imperata cylindrica, isolated from the banks of an extreme acidic environment, using complementary techniques: Mösbauer spectroscopy (MS), X-ray diffraction (XRD), scanning electron microscopy (SEM) coupled to energy-dispersive X-ray microanalysis (EDAX) and transmission electron microscopy (TEM), has shown that two main biominerals, jarosite and ferrihydrate-ferritin, accumulate in the different tissues. Jarosite accumulates mainly in roots and rhizomes, while ferritin has been detected in all the structures. A model of iron management in I. cylindrica is presented.

Direct oxygen uptake from air by novel glycogen accumulating organism dominated biofilm minimizes excess sludge production.

PubMed

Hossain, Md Iqbal; Paparini, Andrea; Cord-Ruwisch, Ralf

2018-05-29

The cost associated with treatment and disposal of excess sludge produced is one of the greatest operational expenses in wastewater treatment plants. In this study, we quantify and explain greatly reduced excess sludge production in the novel glycogen accumulating organism (GAO) dominated drained biofilm system previously shown to be capable of extremely energy efficient removal of organic carbon (biological oxygen demand or BOD) from wastewater. The average excess sludge production rate was 0.05 g VSS g -1 BOD (acetate) removed, which is about 9-times lower than that of comparative studies using the same acetate based synthetic wastewater. The substantially lower sludge yield was attributed to a number of features such as the high oxygen consumption facilitated by direct oxygen uptake from air, high biomass content (21.41 g VSS L -1 of reactor), the predominance of the GAO (Candidatus competibacter) with a low growth yield and the overwhelming presence of the predatory protozoa (Tetramitus) in the biofilm. Overall, the combination of low-energy requirement for air supply (no compressed air supply) and the low excess sludge production rate, could make this novel "GAO drained biofilm" process one of the most economical ways of biological organic carbon removal from wastewater. Copyright © 2018. Published by Elsevier B.V.

Novel process of bio-chemical ammonia removal from air streams using a water reflux system and zeolite as filter media.

PubMed

Vitzthum von Eckstaedt, Sebastian; Charles, Wipa; Ho, Goen; Cord-Ruwisch, Ralf

2016-02-01

A novel biofilter that removes ammonia from air streams and converts it to nitrogen gas has been developed and operated continuously for 300 days. The ammonia from the incoming up-flow air stream is first absorbed into water and the carrier material, zeolite. A continuous gravity reflux of condensed water from the exit of the biofilter provides moisture for nitrifying bacteria to develop and convert dissolved ammonia (ammonium) to nitrite/nitrate. The down-flow of the condensed water reflux washes down nitrite/nitrate preventing ammonium and nitrite/nitrate accumulation at the top region of the biofilter. The evaporation caused by the inflow air leads to the accumulation of nitrite to extremely high concentrations in the bottom of the biofilter. The high nitrite concentrations favour the spontaneous chemical oxidation of ammonium by nitrite to nitrogen (N2). Tests showed that this chemical reaction was catalysed by the zeolite filter medium and allowed it to take place at room temperature. This study shows that ammonia can be removed from air streams and converted to N2 in a fully aerated single step biofilter. The process also overcomes the problem of microorganism-inhibition and resulted in zero leachate production. Copyright © 2015 Elsevier Ltd. All rights reserved.

Formation of biomineral iron oxides compounds in a Fe hyperaccumulator plant: Imperata cylindrica (L.) P. Beauv.

PubMed

Fuente, V; Rufo, L; Juárez, B H; Menéndez, N; García-Hernández, M; Salas-Colera, E; Espinosa, A

2016-01-01

We report a detailed work of composition and location of naturally formed iron biominerals in plant cells tissues grown in iron rich environments as Imperata cylindrica. This perennial grass grows on the Tinto River banks (Iberian Pyritic Belt) in an extreme acidic ecosystem (pH∼2.3) with high concentration of dissolved iron, sulphate and heavy metals. Iron biominerals were found at the cellular level in tissues of root, stem and leaf both in collected and laboratory-cultivated plants. Iron accumulated in this plant as a mix of iron compounds (mainly as jarosite, ferrihydrite, hematite and spinel phases) was characterized by X-ray diffraction (XRD), X-ray absorption spectroscopy (XAS), Mössbauer spectroscopy (MS), magnetometry (SQUID), electron microscopy with energy dispersive X-ray spectroscopy (SEM-EDX; TEM-EDX; HRSTEM). A low fraction of phosphorous was detected in this iron hyperaccumulator plant. Root and rhizomes tissues present a high proportion of ferromagnetic iron oxide compounds. Iron oxides-rich zones are localized in electron dense intra and inter-cellular aggregates that appear as dark deposits covering the inner membrane and organelles of the cell. This study aims to contribute to a better understanding of the mechanisms of accumulation, transport, distribution of iron in Imperata cylindrica. Copyright © 2015 Elsevier Inc. All rights reserved.

Investigating Diet as the Source ofTetrodotoxin in Pleurobranchaea maculata

PubMed Central

Khor, Serena; Wood, Susanna A.; Salvitti, Lauren; Taylor, David I.; Adamson, Janet; McNabb, Paul; Cary, Stephen Craig

2013-01-01

The origin of tetrodotoxin (TTX) is highly debated; researchers have postulated either an endogenous or exogenous source with the host accumulating TTX symbiotically or via food chain transmission. The aim of this study was to determine whether the grey side-gilled sea slug (Pleurobranchaea maculata) could obtain TTX from a dietary source, and to attempt to identify this source through environmental surveys. Eighteen non-toxic P. maculata were maintained in aquariums and twelve were fed a TTX-containing diet. Three P. maculata were harvested after 1 h, 24 h, 17 days and 39 days and TTX concentrations in their stomach, gonad, mantle and remaining tissue/fluids determined using liquid chromatography-mass spectrometry. Tetrodotoxin was detected in all organs/tissue after 1 h with an average uptake of 32%. This decreased throughout the experiment (21%, 15% and 9%, respectively). Benthic surveys at sites with dense populations of toxic P. maculata detected very low or no TTX in other organisms. This study demonstrates that P. maculata can accumulate TTX through their diet. However, based on the absence of an identifiable TTX source in the environment, in concert with the extremely high TTX concentrations and short life spans of P. maculata, it is unlikely to be the sole TTX source for this species. PMID:24368566

Seed desiccation mechanisms co-opted for vegetative desiccation in the resurrection grass Oropetium thomaeum.

PubMed

VanBuren, Robert; Wai, Ching Man; Zhang, Qingwei; Song, Xiaomin; Edger, Patrick P; Bryant, Doug; Michael, Todd P; Mockler, Todd C; Bartels, Dorothea

2017-10-01

Resurrection plants desiccate during periods of prolonged drought stress, then resume normal cellular metabolism upon water availability. Desiccation tolerance has multiple origins in flowering plants, and it likely evolved through rewiring seed desiccation pathways. Oropetium thomaeum is an emerging model for extreme drought tolerance, and its genome, which is the smallest among surveyed grasses, was recently sequenced. Combining RNA-seq, targeted metabolite analysis and comparative genomics, we show evidence for co-option of seed-specific pathways during vegetative desiccation. Desiccation-related gene co-expression clusters are enriched in functions related to seed development including several seed-specific transcription factors. Across the metabolic network, pathways involved in programmed cell death inhibition, ABA signalling and others are activated during dehydration. Oleosins and oil bodies that typically function in seed storage are highly abundant in desiccated leaves and may function for membrane stability and storage. Orthologs to seed-specific LEA proteins from rice and maize have neofunctionalized in Oropetium with high expression during desiccation. Accumulation of sucrose, raffinose and stachyose in drying leaves mirrors sugar accumulation patterns in maturing seeds. Together, these results connect vegetative desiccation with existing seed desiccation and drought responsive pathways and provide some key candidate genes for engineering improved drought tolerance in crop plants. © 2017 John Wiley & Sons Ltd.

Potential accumulation of contaminated sediments in a reservoir of a high-Andean watershed: Morphodynamic connections with geochemical processes

NASA Astrophysics Data System (ADS)

Contreras, María. Teresa; Müllendorff, Daniel; Pastén, Pablo; Pizarro, Gonzalo E.; Paola, Chris; Escauriaza, Cristián.

2015-05-01

Rapid changes due to anthropic interventions in high-altitude environments, such as the Altiplano region in South America, require new approaches to understand the connections between physical and geochemical processes. Alterations of the water quality linked to the river morphology can affect the ecosystems and human development in the long term. The future construction of a reservoir in the Lluta River, located in northern Chile, will change the spatial distribution of arsenic-rich sediments, which can have significant effects on the lower parts of the watershed. In this investigation, we develop a coupled numerical model to predict and evaluate the interactions between morphodynamic changes in the Lluta reservoir, and conditions that can potentially desorb arsenic from the sediments. Assuming that contaminants are mobilized under anaerobic conditions, we calculate the oxygen concentration within the sediments to study the interactions of the delta progradation with the potential arsenic release. This work provides a framework for future studies aimed to analyze the complex connections between morphodynamics and water quality, when contaminant-rich sediments accumulate in a reservoir. The tool can also help to design effective risk management and remediation strategies in these extreme environments. This article was corrected on 15 JUNE 2015. See the end of the full text for details.

Surface-Atmosphere Connections on Titan: A New Window into Terrestrial Hydroclimate

NASA Astrophysics Data System (ADS)

Faulk, Sean

This dissertation investigates the coupling between the large-scale atmospheric circulation and surface processes on Titan, with a particular focus on methane precipitation and its influence on surface geomorphology and hydrology. As the only body in the Solar System with an active hydrologic cycle other than Earth, Titan presents a valuable laboratory for studying principles of hydroclimate on terrestrial planets. Idealized general circulation models (GCMs) are used here to test hypotheses regarding Titan's surface-atmosphere connections. First, an Earth-like GCM simulated over a range of rotation rates is used to evaluate the effect of rotation rate on seasonal monsoon behavior. Slower rotation rates result in poleward migration of summer rain, indicating a large-scale atmospheric control on Titan's observed dichotomy of dry low latitudes and moist high latitudes. Second, a Titan GCM benchmarked against observations is used to analyze the magnitudes and frequencies of extreme methane rainstorms as simulated by the model. Regional patterns in these extreme events correlate well with observed geomorphic features, with the most extreme rainstorms occurring in mid-latitude regions associated with high alluvial fan concentrations. Finally, a planetary surface hydrology scheme is developed and incorporated into a Titan GCM to evaluate the roles of surface flow, subsurface flow, infiltration, and groundmethane evaporation in Titan's climate. The model reproduces Titan's observed surface liquid and cloud distributions, and reaches an equilibrium state with limited interhemispheric transport where atmospheric transport is approximately balanced by subsurface transport. The equilibrium state suggests that Titan's current hemispheric surface liquid asymmetry, favoring methane accumulation in the north, is stable in the modern climate.

Climate model studies of synchronously rotating planets.

PubMed

Joshi, Manoj

2003-01-01

M stars constitute 75% of main sequence stars though, until recently, their star systems have not been considered suitable places for habitable planets to exist. In this study the climate of a synchronously rotating planet around an M dwarf star is evaluated using a three-dimensional global atmospheric circulation model. The presence of clouds and evaporative cooling at the surface of the planet result in a cooler surface temperature at the subsolar point. Water ice forms at the polar regions and on the dark side, where the minimum temperature lies between -30 degrees C and 0 degrees C. As expected, rainfall is extremely high on the starlit side and extremely low on the dark side. The presence of a dry continent causes higher temperatures on the dayside, and allows accumulation of snow on the nightside. The absence of any oceans leads to higher day-night temperature differences, consistent with previous work. The present study reinforces recent conclusions that synchronously rotating planets within the circumstellar habitable zones of M dwarf stars should be habitable, and therefore M dwarf systems should not be excluded in future searches for exoplanets.

Communication path for extreme environments

NASA Technical Reports Server (NTRS)

Jorgensen, Charles C. (Inventor); Betts, Bradley J. (Inventor)

2010-01-01

Methods and systems for using one or more radio frequency identification devices (RFIDs), or other suitable signal transmitters and/or receivers, to provide a sensor information communication path, to provide location and/or spatial orientation information for an emergency service worker (ESW), to provide an ESW escape route, to indicate a direction from an ESW to an ES appliance, to provide updated information on a region or structure that presents an extreme environment (fire, hazardous fluid leak, underwater, nuclear, etc.) in which an ESW works, and to provide accumulated thermal load or thermal breakdown information on one or more locations in the region.

Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size.

PubMed

Kelly, Laura J; Renny-Byfield, Simon; Pellicer, Jaume; Macas, Jiří; Novák, Petr; Neumann, Pavel; Lysak, Martin A; Day, Peter D; Berger, Madeleine; Fay, Michael F; Nichols, Richard A; Leitch, Andrew R; Leitch, Ilia J

2015-10-01

Plants exhibit an extraordinary range of genome sizes, varying by > 2000-fold between the smallest and largest recorded values. In the absence of polyploidy, changes in the amount of repetitive DNA (transposable elements and tandem repeats) are primarily responsible for genome size differences between species. However, there is ongoing debate regarding the relative importance of amplification of repetitive DNA versus its deletion in governing genome size. Using data from 454 sequencing, we analysed the most repetitive fraction of some of the largest known genomes for diploid plant species, from members of Fritillaria. We revealed that genomic expansion has not resulted from the recent massive amplification of just a handful of repeat families, as shown in species with smaller genomes. Instead, the bulk of these immense genomes is composed of highly heterogeneous, relatively low-abundance repeat-derived DNA, supporting a scenario where amplified repeats continually accumulate due to infrequent DNA removal. Our results indicate that a lack of deletion and low turnover of repetitive DNA are major contributors to the evolution of extremely large genomes and show that their size cannot simply be accounted for by the activity of a small number of high-abundance repeat families. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

The advantage of a decreasing right-hand superiority: the influence of laterality on a selected musical skill (sight reading achievement).

PubMed

Kopiez, Reinhard; Galley, Niels; Lee, Ji In

2006-01-01

In this study, the unrehearsed performance of music, known as 'sight reading', is used as a model to examine the influence of motoric laterality on highly challenging musical performance skills. As expertise research has shown, differences in this skill can be partially explained by factors such as accumulated practise and an early start to training. However, up until now, neurobiological factors that may influence highly demanding instrumental performance have been widely neglected. In an experiment with 52 piano students at a German university music department, we could show that the most challenging musical skill, sight reading (which is characterized by extreme demands on the performer's real time information processing), is positively correlated with decreasing right-hand superiority of performers. Laterality was measured by the differences between left and right-hand performance in a speed tapping task. SR achievement was measured using an accompanying task paradigm. An overall superiority of 22% for non-right-handed pianists was found. This effect is gender-related and stronger in non-right-handed males (r(24) = -0.49, p<0.05) than in non-right-handed females (r(28) = -0.16, p>0.05). We conclude that non-right-handed motoric laterality is associated with neurobiological advantages required for sight reading, an extremely demanding musical subskill.

Associations of office workers' objectively assessed occupational sitting, standing and stepping time with musculoskeletal symptoms.

PubMed

Coenen, Pieter; Healy, Genevieve N; Winkler, Elisabeth A H; Dunstan, David W; Owen, Neville; Moodie, Marj; LaMontagne, Anthony D; Eakin, Elizabeth A; O'Sullivan, Peter B; Straker, Leon M

2018-04-22

We examined the association of musculoskeletal symptoms (MSS) with workplace sitting, standing and stepping time, as well as sitting and standing time accumulation (i.e. usual bout duration of these activities), measured objectively with the activPAL3 monitor. Using baseline data from the Stand Up Victoria trial (216 office workers, 14 workplaces), cross-sectional associations of occupational activities with self-reported MSS (low-back, upper and lower extremity symptoms in the last three months) were examined using probit regression, correcting for clustering and adjusting for confounders. Sitting bout duration was significantly (p < 0.05) associated, non-linearly, with MSS, such that those in the middle tertile displayed the highest prevalence of upper extremity symptoms. Other associations were non-significant but sometimes involved large differences in symptom prevalence (e.g. 38%) by activity. Though causation is unclear, these non-linear associations suggest that sitting and its alternatives (i.e. standing and stepping) interact with MSS and this should be considered when designing safe work systems. Practitioner summary: We studied associations of objectively assessed occupational activities with musculoskeletal symptoms in office workers. Workers who accumulated longer sitting bouts reported fewer upper extremity symptoms. Total activity duration was not significantly associated with musculoskeletal symptoms. We underline the importance of considering total volumes and patterns of activity time in musculoskeletal research.

Impacts of an "extreme" storm on a low-lying embayed sandy beach (Pals Bay, NW Mediterranean)

NASA Astrophysics Data System (ADS)

Durán, Ruth; Sagristà, Enric; Guillen, Jorge; Ruiz, Antonio; Jiménez, José Antonio

2014-05-01

The present study aims to assess the effects of an extreme storm in the medium-term evolution of a low-lying, low-tidal sandy coast based on airborne LIDAR (LIght Detection and Ranging) derived high-resolution topographic data. LIDAR data were acquired by the Institut Cartogràfic de Catalunya and analyzed in a Geographical Information System (GIS) environment in order to estimate the shoreline displacement (advance or retreat), volumetric changes of the emerged beach, dune erosion and overswash. LIDAR surveys were undertaken in October 2008 and August 2009 to evaluate the impact of an extreme storm that severely hit the north-west Mediterranean coast on 26 December 2008. During this storm, maximum significant wave heights of 7.5 m (with peaks of 14.4 m of maximum wave height) and maximum wave peak period of 12.8 s were recorded at the Palamós buoy, located at 90 m depth. In addition, several weak to moderate storms also occurred during the study period. The Pals Bay in the northern of Catalonia (NW Mediterranean) has been chosen for this study because: (i) it is a low-lying coastal land, which makes the coastline highly susceptible to flooding by waves during storms; and (ii) it includes high natural value areas and urbanized ones that show different behavior under the impact of storms. It comprises three beaches: the Pals Bay beach that extends along 6840 m between L'Estartit and Begur promontories, and two pocket beaches located at the southern end of the Pals Bay, Cala Moreta and Sa Riera, which are only 185 m and 188 m long, respectively. During the study period, shoreline position and volumetric changes in the large bay beach were not homogeneous. The coastline variations showed alongshore fluctuations up to 40 m, probably related to the development of rhythmic topographies in form of beach cups. Overall, the emerged beach experienced a net volumetric loss of -62 516 m3 (-9.14 m3/m). However, the loss of sediment was not uniform. In urbanized areas, sediment erosion occurred along the whole beach profile, whereas in natural areas foreshore erosion was accompanied by net accumulation of sediment in the backshore. This positive volumetric gain in the upper beach could be largely attributed to overwash processes during the extreme storm, which also caused dune erosion and overwash fan deposition. Nevertheless, the smaller pocked beaches behaved differently. In Cala Moreta, shoreline evolution presented an anti-clockwise rotation of the beach, with a small net loss of sediment of -265 m3 (-1.43 m3/m). Sa Riera showed a small retreat of the shoreline and an important accumulation of sediment in the backshore that resulted in a net positive volume balance in the emerged beach of +2515 m3 (+13.38 m3/m).

Microbial production of polyhydroxybutyrate with tailor-made properties: an integrated modelling approach and experimental validation.

PubMed

Penloglou, Giannis; Chatzidoukas, Christos; Kiparissides, Costas

2012-01-01

The microbial production of polyhydroxybutyrate (PHB) is a complex process in which the final quantity and quality of the PHB depend on a large number of process operating variables. Consequently, the design and optimal dynamic operation of a microbial process for the efficient production of PHB with tailor-made molecular properties is an extremely interesting problem. The present study investigates how key process operating variables (i.e., nutritional and aeration conditions) affect the biomass production rate and the PHB accumulation in the cells and its associated molecular weight distribution. A combined metabolic/polymerization/macroscopic modelling approach, relating the process performance and product quality with the process variables, was developed and validated using an extensive series of experiments and measurements. The model predicts the dynamic evolution of the biomass growth, the polymer accumulation, the consumption of carbon and nitrogen sources and the average molecular weights of the PHB in a bioreactor, under batch and fed-batch operating conditions. The proposed integrated model was used for the model-based optimization of the production of PHB with tailor-made molecular properties in Azohydromonas lata bacteria. The process optimization led to a high intracellular PHB accumulation (up to 95% g of PHB per g of DCW) and the production of different grades (i.e., different molecular weight distributions) of PHB. Copyright © 2011 Elsevier Inc. All rights reserved.

Heavy metal accumulation by poplar in calcareous soil with various degrees of multi-metal contamination: implications for phytoextraction and phytostabilization.

PubMed

Hu, Yahu; Nan, Zhongren; Su, Jieqiong; Wang, Ning

2013-10-01

The object of this study was to assess the capacity of Populus alba L. var. pyramidalis Bunge for phytoremediation of heavy metals on calcareous soils contaminated with multiple metals. In a pot culture experiment, a multi-metal-contaminated calcareous soil was mixed at different ratios with an uncontaminated, but otherwise similar soil, to establish a gradient of soil metal contamination levels. In a field experiment, poplars with different stand ages (3, 5, and 7 years) were sampled randomly in a wastewater-irrigated field. The concentrations of cadmium (Cd), Cu, lead (Pb), and zinc (Zn) in the poplar tissues and soil were determined. The accumulation of Cd and Zn was greatest in the leaves of P. pyramidalis, while Cu and Pb mainly accumulated in the roots. In the pot experiment, the highest tissue concentrations of Cd (40.76 mg kg(-1)), Cu (8.21 mg kg(-1)), Pb (41.62 mg kg(-1)), and Zn (696 mg kg(-1)) were all noted in the multi-metal-contaminated soil. Although extremely high levels of Cd and Zn accumulated in the leaves, phytoextraction using P. pyramidalis may take at least 24 and 16 years for Cd and Zn, respectively. The foliar concentrations of Cu and Pb were always within the normal ranges and were never higher than 8 and 5 mg kg(-1), respectively. The field experiment also revealed that the concentrations of all four metals in the bark were significantly higher than that in the wood. In addition, the tissue metal concentrations, together with the NH4NO3-extractable concentrations of metals in the root zone, decreased as the stand age increased. P. pyramidalis is suitable for phytostabilization of calcareous soils contaminated with multiple metals, but collection of the litter fall would be necessary due to the relatively high foliar concentrations of Cd and Zn.

A new look at an old virus: patterns of mutation accumulation in the human H1N1 influenza virus since 1918

PubMed Central

2012-01-01

Background The H1N1 influenza A virus has been circulating in the human population for over 95 years, first manifesting itself in the pandemic of 1917–1918. Initial mortality was extremely high, but dropped exponentially over time. Influenza viruses have high mutation rates, and H1N1 has undergone significant genetic changes since 1918. The exact nature of H1N1 mutation accumulation over time has not been fully explored. Methods We have made a comprehensive historical analysis of mutational changes within H1N1 by examining over 4100 fully-sequenced H1N1 genomes. This has allowed us to examine the genetic changes arising within H1N1 from 1918 to the present. Results We document multiple extinction events, including the previously known extinction of the human H1N1 lineage in the 1950s, and an apparent second extinction of the human H1N1 lineage in 2009. These extinctions appear to be due to a continuous accumulation of mutations. At the time of its disappearance in 2009, the human H1N1 lineage had accumulated over 1400 point mutations (more than 10% of the genome), including approximately 330 non-synonymous changes (7.4% of all codons). The accumulation of both point mutations and non-synonymous amino acid changes occurred at constant rates (μ = 14.4 and 2.4 new mutations/year, respectively), and mutations accumulated uniformly across the entire influenza genome. We observed a continuous erosion over time of codon-specificity in H1N1, including a shift away from host (human, swine, and bird [duck]) codon preference patterns. Conclusions While there have been numerous adaptations within the H1N1 genome, most of the genetic changes we document here appear to be non-adaptive, and much of the change appears to be degenerative. We suggest H1N1 has been undergoing natural genetic attenuation, and that significant attenuation may even occur during a single pandemic. This process may play a role in natural pandemic cessation and has apparently contributed to the exponential decline in mortality rates over time, as seen in all major human influenza strains. These findings may be relevant to the development of strategies for managing influenza pandemics and strain evolution. PMID:23062055

Can we document if regulation and Best Available Techniques (BAT) have any positive impact on the marine environment? A case based on a steel mill in Greece.

PubMed

Panagiotoulias, I; Botsou, F; Kaberi, H; Karageorgis, A P; Scoullos, M

2017-10-31

In order to document the impact of Best Available Techniques (BAT) and implementation of regulation on the improvement of the coastal marine environment state, we examined the case of a representative steel mill located at the Gulf of Elefsis (Greece). The evaluation of metal pollution was based on the analysis of major and trace elements, organic carbon, magnetic properties, and sediment accumulation rates, in sediment cores obtained from the vicinity of the plant. The analytical data are discussed in relation to steel production, changes of production routes, and adoption of BAT introduced in order to fulfill EU and national legislation. The results show that the input of pollutants to sediments and the degree of contamination were reduced by approximately 40-70% in the decade 2003-2015 in comparison to the periods of high discharges (1963-2002), whereas the toxicity risks from "high-to-extremely high" were reduced to "medium-to-high."

Mesoscale disturbance and ecological response to decadal climatic variability in the American Southwest

USGS Publications Warehouse

Swetnam, T.W.; Betancourt, J.L.

1998-01-01

Ecological responses to climatic variability in the Southwest include regionally synchronized fires, insect outbreaks, and pulses in tree demography (births and deaths). Multicentury, tree-ring reconstructions of drought, disturbance history, and tree demography reveal climatic effects across scales, from annual to decadal, and from local (<102 km2) to mesoscale (104-106 km2). Climate-disturbance relations are more variable and complex than previously assumed. During the past three centuries, mesoscale outbreaks of the western spruce budworm (Choristoneura occidentalis) were associated with wet, not dry episodes, contrary to conventional wisdom. Regional fires occur during extreme droughts but, in some ecosystems, antecedent wet conditions play a secondary role by regulating accumulation of fuels. Interdecadal changes in fire-climate associations parallel other evidence for shifts in the frequency or amplitude of the Southern Oscillation (SO) during the past three centuries. High interannual, fire-climate correlations (r = 0.7 to 0.9) during specific decades (i.e., circa 1740-80 and 1830-60) reflect periods of high amplitude in the SO and rapid switching from extreme wet to dry years in the Southwest, thereby entraining fire occurrence across the region. Weak correlations from 1780 to 1830 correspond with a decrease in SO frequency or amplitude inferred from independent tree-ring width, ice core, and coral isotope reconstructions. Episodic dry and wet episodes have altered age structures and species composition of woodland and conifer forests. The scarcity of old, living conifers established before circa 1600 suggests that the extreme drought of 1575-95 had pervasive effects on tree populations. The most extreme drought of the past 400 years occurred in the mid-twentieth century (1942-57). This drought resulted in broadscale plant dieoffs in shrublands, woodlands, and forests and accelerated shrub invasion of grasslands. Drought conditions were broken by the post-1976 shift to the negative SO phase and wetter cool seasons in the Southwest. The post-1976 period shows up as an unprecedented surge in tree-ring growth within millennia-length chronologies. This unusual episode may have produced a pulse in tree recruitment and improved rangeland conditions (e.g., higher grass production), though additional study is needed to disentangle the interacting roles of land use and climate. The 1950s drought and the post-1976 wet period and their aftermaths offer natural experiments to study long-term ecosystem response to interdecadal climate variability.Ecological responses to climatic variability in the Southwest include regionally synchronized fires, insect outbreaks, and pulses in tree demography (births and deaths). Multicentury, tree-ring reconstructions of drought, disturbance history, and tree demography reveal climatic effects across scales, from annual to decadal, and from local (<102 km2) to mesoscale (104-106 km2). Climate-disturbance relations are more variable and complex than previously assumed. During the past three centuries, mesoscale outbreaks of the western spruce budworm (Choristoneura occidentalis) were associated with wet, not dry episodes, contrary to conventional wisdom. Regional fires occur during extreme droughts but, in some ecosystems, antecedent wet conditions play a secondary role by regulating accumulation of fuels. Interdecadal changes in fire-climate associations parallel other evidence for shifts in the frequency or amplitude of the Southern Oscillation (SO) during the past three centuries. High interannual, fire-climate correlations (r = 0.7 to 0.9) during specific decades (i.e., circa 1740-80 and 1830-60) reflect periods of high amplitude in the SO and rapid switching from extreme wet to dry years in the Southwest, thereby entraining fire occurrence across the region. Weak correlations from 1780 to 1830 correspond with a decrease in SO frequency or amplitude inferred from independent tree-ring width, ic

A Paleo Perspective on Arctic and Mid-latitude Linkages from a Southeast Alaska Ice Core

NASA Astrophysics Data System (ADS)

Porter, S. E.; Mosley-Thompson, E.; Thompson, L. G.; Bolzan, J. F.

2017-12-01

Recent extreme weather events in the Northern Hemisphere have been linked to anomalously amplified jet stream patterns, North Pacific marine heatwaves, retreating Arctic sea ice extent, and/or the combination thereof. The role of the Arctic in influencing mid-latitude weather and extreme events is a burgeoning topic of climate research that is limited primarily to the recent decades in which Arctic amplification and shrinking Arctic sea ice extent are occurring. Paleo-proxy data afford an opportunity to place the changing Arctic and its far-reaching climatic consequences in the longer context of Earth's climate history and allow identification of time periods with conditions analogous to the present. Ice core-derived annual net accumulation from the Bona-Churchill (BC) ice core, retrieved in 2002 from the Wrangell-St. Elias mountain range in southeast Alaska, is used to explore the historical characteristics of the regional North Pacific climate and the further afield teleconnections. Variability of accumulation on BC is driven primarily by shifts in the position of the Aleutian Low which influences the available moisture sources for the drill site. The accumulation record is also related to sea surface temperatures in the Gulf of Alaska, defined here by the North Pacific Mode and somewhat colloquially as the North Pacific "blob". Thus due to its connection with the Aleutian Low and North Pacific sea surface temperatures, this uniquely situated ice core record indirectly captures the phasing of troughs and ridges in the polar jet stream over North America, and thereby facilitates examination of the atmospheric wave structure prior to the instrumental record. The relationships among the ice core accumulation record and various North Pacific climate features are presented along with evidence identifying specific time periods possibly characterized by persistently amplified wave patterns.

Peripheral neuropathy in Tangier disease: A literature review and assessment.

PubMed

Mercan, Metin; Yayla, Vildan; Altinay, Serdar; Seyhan, Serhat

2018-06-01

Tangier disease (TD) (OMIM#205400) is a rare cause of inherited metabolic neuropathies characterized by marked deficiency of high-density lipoproteins and accumulation of cholesterol esters in various tissue resulting from reverse cholesterol transport deficiency. We report a case of a patient with TD with multifocal demyelinating neuropathy with conduction block who presents with winging scapula, tongue, and asymmetric extremity weakness. We also present a review of all studies published from 1960 to 2017 regarding peripheral neuropathy in TD. Our search identified 54 patients with TD with peripheral neuropathy. Syringomyelia-like neuropathy subtype (52.4%) was more frequent than multifocal sensorial and motor neuropathy subtype (26.2%), focal neuropathy subtype (19.1%), and distal symmetric polyneuropathy subtype (2.4%). Splenomegaly was the most common (40.7%) clinical manifestation in these patients. The pattern of electrodiagnostic abnormalities are: (1) demyelinating abnormalities were more predominant in the upper extremities than in the lower extremities and (2) slowing of motor nerve conduction was more prominent in the intermediate segment than in distal nerve segments. The sural-sparing pattern was present in 34.6% and conduction block was present in 11.5% of the patients. Our literature review and our case showed the clinical spectrum of TD neuropathy is quite wide and that it should be considered in the differential diagnosis of non-uniform demyelinating neuropathies. © 2018 Peripheral Nerve Society.

Are Autistic Traits in the General Population Related to Global and Regional Brain Differences?

ERIC Educational Resources Information Center

Koolschijn, P. Cédric M. P.; Geurts, Hilde M.; van der Leij, Andries R.; Scholte, H. Steven

2015-01-01

There is accumulating evidence that autistic-related traits in the general population lie on a continuum, with autism spectrum disorders representing the extreme end of this distribution. Here, we tested the hypothesis of a possible relationship between autistic traits and brain morphometry in the general population. Participants completed the…

Genomic Sciences for Developmentalists: A Merge of Science and Practice

ERIC Educational Resources Information Center

Grigorenko, Elena L.

2015-01-01

The etiological forces of development have been a central question for the developmental sciences (however defined) since their crystallization as a distinct branch of scientific inquiry. Although the history of these sciences contains examples of extreme positions capitalizing on either the predominance of the genome (i.e., the accumulation of…

Autochthonous Chikungunya Transmission and Extreme Climate Events in Southern France.

PubMed

Roiz, David; Boussès, Philippe; Simard, Frédéric; Paupy, Christophe; Fontenille, Didier

2015-06-01

Extreme precipitation events are increasing as a result of ongoing global warming, but controversy surrounds the relationship between flooding and mosquito-borne diseases. A common view among the scientific community and public health officers is that heavy rainfalls have a flushing effect on breeding sites, which negatively affects vector populations, thereby diminishing disease transmission. During 2014 in Montpellier, France, there were at least 11 autochthonous cases of chikungunya caused by the invasive tiger mosquito Aedes albopictus in the vicinity of an imported case. We show that an extreme rainfall event increased and extended the abundance of the disease vector Ae. albopictus, hence the period of autochthonous transmission of chikungunya. We report results from close monitoring of the adult and egg population of the chikungunya vector Ae. albopictus through weekly sampling over the entire mosquito breeding season, which revealed an unexpected pattern. Statistical analysis of the seasonal dynamics of female abundance in relation to climatic factors showed that these relationships changed after the heavy rainfall event. Before the inundations, accumulated temperatures are the most important variable predicting Ae. albopictus seasonal dynamics. However, after the inundations, accumulated rainfall over the 4 weeks prior to capture predicts the seasonal dynamics of this species and extension of the transmission period. Our empirical data suggests that heavy rainfall events did increase the risk of arbovirus transmission in Southern France in 2014 by favouring a rapid rise in abundance of vector mosquitoes. Further studies should now confirm these results in different ecological contexts, so that the impact of global change and extreme climatic events on mosquito population dynamics and the risk of disease transmission can be adequately understood.

Sediment accumulation rates and high-resolution stratigraphy of recent fluvial suspension deposits in various fluvial settings, Morava River catchment area, Czech Republic

NASA Astrophysics Data System (ADS)

Sedláček, Jan; Bábek, Ondřej; Kielar, Ondřej

2016-02-01

We present a comprehensive study concerning sedimentary processes in fluvial sediment traps within the Morava River catchment area (Czech Republic) involving three dammed reservoirs, four meanders and oxbow lakes, and several natural floodplain sites. The objective of the study was to determine sediment accumulation rates (SAR), estimate erosion rates, calculating these using a combination of the 137Cs method and historical data. Another purpose of this study was to provide insight into changing erosion and accumulation rates over the last century. Extensive water course modifications were carried out in the Morava River catchment area during the twentieth century, which likely affected sedimentation rates along the river course. Other multiproxy stratigraphic methods (X-ray densitometry, magnetic susceptibility, and visible-light reflectance spectrometry) were applied to obtain additional information about sediment infill. Sediment stratigraphy revealed distinct distal-to-proximal patterns, especially in reservoirs. Granulometrically, silts and sandy silts prevailed in sediments. Oxbow lakes and meanders contained larger amounts of clay and organic matter, which is the main difference between them and reservoirs. Pronounced 137Cs peaks were recorded in all studied cores (maximum 377 Bq·kg- 1), thus indicating Chernobyl fallout from 1986 or older events. Calculated sediment accumulation rates were lowest in distal parts of reservoirs (0.13-0.58 cm/y) and floodplains (0.45-0.88 cm/y), moderately high rates were found in proximal parts of reservoirs and oxbow lakes (2.27-4.4 cm/y), and the highest rates in some oxbow lakes located near the river (6-8 cm/y). The frequency of the inundation still can be high in some natural areas as in the Litovelské Pomoraví protected area, whereas the decreasing frequency of the inundation in other modified parts can contribute to a lower sedimentation rate. The local effects such as difference between SARs in oxbow lakes and reservoirs, different grain size distribution in both systems, and high variability in thickness of their proximal and distal parts play a crucial role in the analysis of regional accumulation rates. Local effects are much stronger than regional effects, such as rainfall and land use. Combined with the low resolution of time scales (usually only three datums are available: reservoir construction datum, 137Cs fallout event, and top of sediment), these effects may obscure the general trends of regionally increasing or decreasing net SARs, making the analysis of erosion rates from the sedimentary record an extremely difficult task.

Berkeley extreme-ultraviolet airglow rocket spectrometer: BEARS.

PubMed

Cotton, D M; Chakrabarti, S

1992-09-20

We describe the Berkeley extreme-UV airglow rocket spectrometer, which is a payload designed to test several thermospheric remote-sensing concepts by measuring the terrestrial O I far-UV and extreme-UV dayglow and the solar extreme-UV spectrum simultaneously. The instrument consisted of two near-normal Rowland mount spectrometers and a Lyman-alpha photometer. The dayglow spectrometer covered two spectral regions from 980 to 1040 A and from 1300 to 1360 A with 1.5-A resolution. The solar spectrometer had a bandpass of 250-1150 A with an ~ 10-A resolution. All three spectra were accumulated by using a icrochannel-plate-intensified, two-dimensional imaging detector with three separate wedge-and strip anode readouts. The hydrogen Lyman-alpha photometer was included to monitor the solar Lyman-alpha irradiance and geocoronal Lyman-alpha emissions. The instrument was designed, fabricated, and calibrated at the University of California, Berkeley and was successfully launched on 30 September 1988 aboard the first test flight of a four-stage sounding rocket, Black Brant XII.

Capability of insulator study by photoemission electron microscopy at SPring-8.

PubMed

Ohkochi, Takuo; Kotsugi, Masato; Yamada, Keisuke; Kawano, Kenji; Horiba, Koji; Kitajima, Fumio; Oura, Masaki; Shiraki, Susumu; Hitosugi, Taro; Oshima, Masaharu; Ono, Teruo; Kinoshita, Toyohiko; Muro, Takayuki; Watanabe, Yoshio

2013-07-01

The observation method of photoemission electron microscopy (PEEM) on insulating samples has been established in an extremely simple way. Surface conductivity is induced locally on an insulating surface by continuous radiation of soft X-rays, and Au films close to the area of interest allow the accumulated charges on the insulated area to be released to ground level. Magnetic domain observations of a NiZn ferrite, local X-ray absorption spectroscopy of sapphire, high-resolution imaging of a poorly conducting Li0.9CoO2 film surface, and Au pattern evaporation on a fine rock particle are demonstrated. Using this technique, all users' experiments on poorly conducting samples have been performed successfully at the PEEM experimental station of SPring-8.

A new concept of endometriosis and adenomyosis: tissue injury and repair (TIAR).

PubMed

Leyendecker, Gerhard; Wildt, Ludwig

2011-03-01

Pelvic endometriosis, deeply infiltrating endometriosis and uterine adenomyosis share a common pathophysiology and may be integrated into the physiological mechanism and new nosological concept of 'tissue injury and repair' (TIAR) and may, in this context, just represent the extreme of a basically physiological, estrogen-related mechanism that is pathologically exaggerated in an extremely estrogen-sensitive reproductive organ. The acronym TIAR describes a fundamental and apparently ubiquitous biological system that becomes operative in mesenchymal tissues following tissue injury and, upon activation, results in the local production of estradiol. Endometriosis and adenomyosis are caused by trauma. In the spontaneously developing disease, chronic uterine peristaltic activity or phases of hyperperistalsis induce, at the endometrial-myometrial interface near the fundo-cornual raphe, microtraumatisations, with activation of the TIAR mechanism. With ongoing traumatisations, such sites of inflammation might accumulate and the increasingly produced estrogens interfere in a paracrine fashion with ovarian control over uterine peristaltic activity, resulting in permanent hyperperistalsis and a self-perpetuation of the disease process. Overt autotraumatisation of the uterus with dislocation of fragments of basal endometrium into the peritoneal cavity and infiltration of basal endometrium into the depth of the myometrial wall ensues. In most cases of endometriosis/adenomyosis a causal event early in the reproductive period of life must be postulated, rapidly leading to archimetral hyperestrogenism and uterine hyperperistalsis. In late premenopausal adenomyosis such an event might not have occurred. However, as indicated by the high prevalence of the disease, it appears to be unavoidable that, with time, chronic normoperistalsis throughout the reproductive period of life accumulates to the same extent of microtraumatisation. With activation of the TIAR mechanism followed by chronic inflammation and infiltrative growth, endometriosis/adenomyosis of the younger woman and premenopausal adenomyosis share in principal the same pathophysiology.

Selective uptake of major and trace elements in Erica andevalensis, an endemic species to extreme habitats in the Iberian Pyrite Belt.

PubMed

Monaci, Fabrizio; Leidi, Eduardo O; Dolores, Mingorance Maria; Valdés, Benito Oliva; Rossini, Sabina Sabina; Bargagli, Roberto

2011-01-01

To assess the ecophysiological traits and the phytoremediation potential of the endemic heather Erica andevalensis, we determined the concentrations of major and trace elements in different plant parts and in rizosphere soils from Riotinto mining district (Huelva, Spain). The results showed that E. andevalensis may grow on substrates with very high As, Cu, Fe and Pb concentrations (up to 4114, 1050, 71900 and 15614 microg/g dry weight, respectively), very low availability of macro- and micronutrients and with pH values ranging from 3.3 to 4.9. In these harsh edaphic conditions E. andevalensis selectively absorbed and translocated essential nutrients and excludes potentially phytotoxic elements, which were accumulated in the root epidermis. The concentrations of major and trace elements in E. andevalensis aerial parts from the Riotinto mining district were in the normal range for plants; likewise other Erica species it accumulated Mn and only in a very polluted site we measured leaf concentrations of As and Pb within the excessive or toxic limits for plants. Differently from previous studies, which emphasized the soil pH and bioavailability of phytotoxic elements as the main stress factors, this study showed that in the Riotinto region, E. andevalensis can tolerate wide range of pH and toxic element concentrations; the harshest environments colonized by monospecific patches of this species were characterized above all by very low availability of nutrients. The extraordinary capability to adapt to these extreme habitats made E. andevalensis a priority species to promote the phytostabilization and the development of a self-sustaining vegetative cover on Riotinto mine tailings.

Deconstructing the King Megafire.

PubMed

Coen, Janice L; Stavros, E Natasha; Fites-Kaufman, Josephine A

2018-05-24

Hypotheses that megafires - very large, high impact fires - are caused by either climate effects such as drought or fuel accumulation due to fire exclusion with accompanying changes to forest structure have long been alleged and guided policy but their physical basis remains untested. Here, unique airborne observations and microscale simulations using a coupled weather - wildland fire behavior model allowed a recent megafire, the King Fire, to be deconstructed and the relative impacts of forest structure, fuel load, weather, and drought on fire size, behavior, and duration to be separated. Simulations reproduced observed details including the arrival at an inclined canyon, a 25-km run, and later slower growth and features. Analysis revealed that fire-induced winds that equaled or exceeded ambient winds and fine-scale airflow undetected by surface weather networks were primarily responsible for the fire's rapid growth and size. Sensitivity tests varied fuel moisture and amount across wide ranges and showed that both drought and fuel accumulation effects were secondary, limited to sloped terrain where they compounded each other, and, in this case, unable to significantly impact the final extent. Compared to standard data, fuel models derived solely from remote sensing of vegetation type and forest structure improved simulated fire progression, notably in disturbed areas, and the distribution of burn severity. These results point to self-reinforcing internal dynamics rather than external forces as a means of generating this and possibly other outlier fire events. Hence, extreme fires need not arise from extreme fire environment conditions. Kinematic models used in operations do not capture fire-induced winds and dynamic feedbacks so can underestimate megafire events. The outcomes provided a nuanced view of weather, forest structure, fuel accumulation, and drought impacts on landscape-scale fire behavior - roles that can be misconstrued using correlational analyses between area burned and macroscale climate data or other exogenous factors. A practical outcome is that fuel treatments should be focused on sloped terrain, where factors multiply, for highest impact. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Pyramiding genes and alleles for improving energy cane biomass yield

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ming, Ray; Nagai, Chifumi; Yu, Qingyi

The overall goal of this project is to identify genes and gene interaction networks contributed to the extreme segregants with 30 folds biomass yield difference in sugarcane F2 populations. Towards achieving this goal, yield trials of 108 F2 extreme segregants from S. officinarum LA Purple and S. robustum MOL5829 (LM population) were carried out in two locations in three years. A yield trial of the second F2 population from S. officinarum LA Purple and S. spontaneum US56-14-4 (LU population) was installed in the summer of 2014 and the first set of yield component data was collected. For genotyping, transcriptomes frommore » leaves and stalks of 70 extreme segregants of the LM F2 population and 119 individuals of the LU F2 populations were sequenced. The genomes of 91 F1 individuals from the LM populations are being sequenced to construct ultra-high density genetic maps for each of the two parents for both assisting the LA Purple genome assembling and for testing a hypothesis of female restitution. The genomes of 110 F2 individuals from single F1 in the LU population, a different set from the 119 F2 individuals used for transcriptome sequencing, are being sequenced for mapping genes and QTLs affecting biomass yield and for testing a hypothesis of female restitution. Gene expression analysis between extreme segregants of high and low biomass yield showed up-regulation of cellulose synthase, cellulose, and xylan synthase in high biomass yield segregants among 3,274 genes differentially expressed between the two extremes. Our transcriptome results revealed not only the increment of cell wall biosynthesis pathway is essential, but the rapid turnover of certain cell wall polymers as well as carbohydrate partitioning are also important for recycling and energy conservation during rapid cell growth in high biomass sugarcane. Seventeen differentially expressed genes in auxin, one in ethylene and one in gibberellin related signaling and biosynthesis pathways were identified, which could potentially regulate biomass yield. Differentially expressed genes, PIF3 and EIL5, involved in gibberellin and ethylene pathway could play an important role in biomass accumulation. Differential gene expression analysis was also carried out on the LU population. High-biomass yield was mainly determined by assimilation of carbon in source tissues. The high-level expression of fermentative genes in the low-biomass group was likely induced by their low-energy status. The haploid (tetraploid) genome of S. spontanium AP85-441 was sequenced with chromosome level assembly and allele defined annotation. This reference genome along with the upcoming S. officinarum genome will allow us to identify genes and alleles contributed to biomass yield.« less

Plasma q -plate for generation and manipulation of intense optical vortices

NASA Astrophysics Data System (ADS)

Qu, Kenan; Jia, Qing; Fisch, Nathaniel J.

2017-11-01

An optical vortex is a light wave with a twisting wavefront around its propagation axis and null intensity in the beam center. Its unique spatial structure of field lends itself to a broad range of applications, including optical communication, quantum information, superresolution microscopy, and multidimensional manipulation of particles. However, accessible intensity of optical vortices have been limited to material ionization threshold. This limitation might be removed by using the plasma medium. Here we propose the design of suitably magnetized plasmas which, functioning as a q -plate, leads to a direct conversion from a high-intensity Gaussian beam into a twisted beam. A circularly polarized laser beam in the plasma accumulates an azimuthal-angle-dependent phase shift and hence forms a twisting wavefront. Our three-dimensional particle-in-cell simulations demonstrate extremely high-power conversion efficiency. The plasma q -plate can work in a large range of frequencies spanning from terahertz to the optical domain.

Integrating a DNA Strand Displacement Reaction with a Whispering Gallery Mode Sensor for Label-Free Mercury (II) Ion Detection.

PubMed

Wu, Fengchi; Wu, Yuqiang; Niu, Zhongwei; Vollmer, Frank

2016-07-29

Mercury is an extremely toxic chemical pollutant of our environment. It has attracted the world's attention due to its high mobility and the ease with which it accumulates in organisms. Sensitive devices and methods specific for detecting mercury ions are, hence, in great need. Here, we have integrated a DNA strand displacement reaction with a whispering gallery mode (WGM) sensor for demonstrating the detection of Hg(2+) ions. Our approach relies on the displacement of a DNA hairpin structure, which forms after the binding of mercury ions to an aptamer DNA sequence. The strand displacement reaction of the DNA aptamer provides highly specific and quantitative means for determining the mercury ion concentration on a label-free WGM sensor platform. Our approach also shows the possibility for manipulating the kinetics of a strand displacement reaction with specific ionic species.

Integrating a DNA Strand Displacement Reaction with a Whispering Gallery Mode Sensor for Label-Free Mercury (II) Ion Detection

PubMed Central

Wu, Fengchi; Wu, Yuqiang; Niu, Zhongwei; Vollmer, Frank

2016-01-01

Mercury is an extremely toxic chemical pollutant of our environment. It has attracted the world’s attention due to its high mobility and the ease with which it accumulates in organisms. Sensitive devices and methods specific for detecting mercury ions are, hence, in great need. Here, we have integrated a DNA strand displacement reaction with a whispering gallery mode (WGM) sensor for demonstrating the detection of Hg2+ ions. Our approach relies on the displacement of a DNA hairpin structure, which forms after the binding of mercury ions to an aptamer DNA sequence. The strand displacement reaction of the DNA aptamer provides highly specific and quantitative means for determining the mercury ion concentration on a label-free WGM sensor platform. Our approach also shows the possibility for manipulating the kinetics of a strand displacement reaction with specific ionic species. PMID:27483277

Electric double-layer capacitance between an ionic liquid and few-layer graphene.

PubMed

Uesugi, Eri; Goto, Hidenori; Eguchi, Ritsuko; Fujiwara, Akihiko; Kubozono, Yoshihiro

2013-01-01

Ionic-liquid gates have a high carrier density due to their atomically thin electric double layer (EDL) and extremely large geometrical capacitance Cg. However, a high carrier density in graphene has not been achieved even with ionic-liquid gates because the EDL capacitance CEDL between the ionic liquid and graphene involves the series connection of Cg and the quantum capacitance Cq, which is proportional to the density of states. We investigated the variables that determine CEDL at the molecular level by varying the number of graphene layers n and thereby optimising Cq. The CEDL value is governed by Cq at n < 4, and by Cg at n > 4. This transition with n indicates a composite nature for CEDL. Our finding clarifies a universal principle that determines capacitance on a microscopic scale, and provides nanotechnological perspectives on charge accumulation and energy storage using an ultimately thin capacitor.

Electric double-layer capacitance between an ionic liquid and few-layer graphene

PubMed Central

Uesugi, Eri; Goto, Hidenori; Eguchi, Ritsuko; Fujiwara, Akihiko; Kubozono, Yoshihiro

2013-01-01

Ionic-liquid gates have a high carrier density due to their atomically thin electric double layer (EDL) and extremely large geometrical capacitance Cg. However, a high carrier density in graphene has not been achieved even with ionic-liquid gates because the EDL capacitance CEDL between the ionic liquid and graphene involves the series connection of Cg and the quantum capacitance Cq, which is proportional to the density of states. We investigated the variables that determine CEDL at the molecular level by varying the number of graphene layers n and thereby optimising Cq. The CEDL value is governed by Cq at n < 4, and by Cg at n > 4. This transition with n indicates a composite nature for CEDL. Our finding clarifies a universal principle that determines capacitance on a microscopic scale, and provides nanotechnological perspectives on charge accumulation and energy storage using an ultimately thin capacitor. PMID:23549208

SEEDS - Strategic explorations of exoplanets and disks with the Subaru Telescope -

NASA Astrophysics Data System (ADS)

Tamura, M.

2016-02-01

The first convincing detection of planets orbiting stars other than the Sun, or exoplanets, was made in 1995. In only 20 years, the number of the exoplanets including promising candidates has already accumulated to more than 5000. Most of the exoplanets discovered so far are detected by indirect methods because the direct imaging of exoplanets needs to overcome the extreme contrast between the bright central star and the faint planets. Using the large Subaru 8.2-m Telescope, a new high-contrast imager, HiCIAO, and second-generation adaptive optics (AO188), the most ambitious high-contrast direct imaging survey to date for giant planets and planet-forming disks has been conducted, the SEEDS project. In this review, we describe the aims and results of the SEEDS project for exoplanet/disk science. The completeness and uniformity of this systematic survey mean that the resulting data set will dominate this field of research for many years.

Emergent biomarker derived from next-generation sequencing to identify pain patients requiring uncommonly high opioid doses

PubMed Central

Kringel, D; Ultsch, A; Zimmermann, M; Jansen, J-P; Ilias, W; Freynhagen, R; Griessinger, N; Kopf, A; Stein, C; Doehring, A; Resch, E; Lötsch, J

2017-01-01

Next-generation sequencing (NGS) provides unrestricted access to the genome, but it produces ‘big data’ exceeding in amount and complexity the classical analytical approaches. We introduce a bioinformatics-based classifying biomarker that uses emergent properties in genetics to separate pain patients requiring extremely high opioid doses from controls. Following precisely calculated selection of the 34 most informative markers in the OPRM1, OPRK1, OPRD1 and SIGMAR1 genes, pattern of genotypes belonging to either patient group could be derived using a k-nearest neighbor (kNN) classifier that provided a diagnostic accuracy of 80.6±4%. This outperformed alternative classifiers such as reportedly functional opioid receptor gene variants or complex biomarkers obtained via multiple regression or decision tree analysis. The accumulation of several genetic variants with only minor functional influences may result in a qualitative consequence affecting complex phenotypes, pointing at emergent properties in genetics. PMID:27139154

Emergent biomarker derived from next-generation sequencing to identify pain patients requiring uncommonly high opioid doses.

PubMed

Kringel, D; Ultsch, A; Zimmermann, M; Jansen, J-P; Ilias, W; Freynhagen, R; Griessinger, N; Kopf, A; Stein, C; Doehring, A; Resch, E; Lötsch, J

2017-10-01

Next-generation sequencing (NGS) provides unrestricted access to the genome, but it produces 'big data' exceeding in amount and complexity the classical analytical approaches. We introduce a bioinformatics-based classifying biomarker that uses emergent properties in genetics to separate pain patients requiring extremely high opioid doses from controls. Following precisely calculated selection of the 34 most informative markers in the OPRM1, OPRK1, OPRD1 and SIGMAR1 genes, pattern of genotypes belonging to either patient group could be derived using a k-nearest neighbor (kNN) classifier that provided a diagnostic accuracy of 80.6±4%. This outperformed alternative classifiers such as reportedly functional opioid receptor gene variants or complex biomarkers obtained via multiple regression or decision tree analysis. The accumulation of several genetic variants with only minor functional influences may result in a qualitative consequence affecting complex phenotypes, pointing at emergent properties in genetics.

SEEDS - Strategic explorations of exoplanets and disks with the Subaru Telescope.

PubMed

Tamura, Motohide

2016-01-01

The first convincing detection of planets orbiting stars other than the Sun, or exoplanets, was made in 1995. In only 20 years, the number of the exoplanets including promising candidates has already accumulated to more than 5000. Most of the exoplanets discovered so far are detected by indirect methods because the direct imaging of exoplanets needs to overcome the extreme contrast between the bright central star and the faint planets. Using the large Subaru 8.2-m Telescope, a new high-contrast imager, HiCIAO, and second-generation adaptive optics (AO188), the most ambitious high-contrast direct imaging survey to date for giant planets and planet-forming disks has been conducted, the SEEDS project. In this review, we describe the aims and results of the SEEDS project for exoplanet/disk science. The completeness and uniformity of this systematic survey mean that the resulting data set will dominate this field of research for many years.

Enzymes and Metabolites in Carbohydrate Metabolism of Desiccation Tolerant Plants

PubMed Central

Zhang, Qingwei; Song, Xiaomin; Bartels, Dorothea

2016-01-01

Resurrection plants can tolerate extreme water loss. Substantial sugar accumulation is a phenomenon in resurrection plants during dehydration. Sugars have been identified as one important factor contributing to desiccation tolerance. Phylogenetic diversity of resurrection plants reflects the diversity of sugar metabolism in response to dehydration. Sugars, which accumulate during dehydration, have been shown to protect macromolecules and membranes and to scavenge reactive oxygen species. This review focuses on the performance of enzymes participating in sugar metabolism during dehydration stress. The relation between sugar metabolism and other biochemical activities is discussed and open questions as well as potential experimental approaches are proposed. PMID:28248249

Atmospheric rivers causing high accumulation storms in East Antarctica: regional climate model evaluation

NASA Astrophysics Data System (ADS)

Lazzara, M. A.; Tsukernik, M.; Gorodetskaya, I.

2016-12-01

Recent studies confirmed that atmospheric rivers (ARs) reach the continent of Antarctica and thus influence the Antarctic accumulation patterns and the ice sheet mass balance (Gorodetskaya et al. 2014, GRL). Similar to mid-latitude ARs, Antarctic ARs are associated with a blocking pattern downstream of a cyclone, which allows channeling of moisture toward the continent. However, due to the extremely cold atmosphere, Antarctic ARs possess some unique features. First, the existence of an AR in high latitudes is always associated with warm advection. Second, in order for an AR to penetrate the continent, it needs to overcome strong low-level outflow winds - katabatic winds - coming from the interior of the continent. Thirdly, sea ice surrounding the Antarctic ice sheet introduces an additional "cold barrier" decreasing the tropospheric moisture holding capacity and promoting precipitation before reaching the ice sheet. We believe these factors contribute to the scarcity of AR events influencing the ice sheet surface mass balance. Nevertheless, their presence is clearly seen in the long-term record. In particular, anomalous accumulation in 2009 and 2011 in Dronning Maud Land in East Antarctica has been linked to atmospheric rivers. We performed a detailed investigation of several AR storm events from 2009 and 2011 using the Weather Research and Forecasting (WRF) model simulations. These simulations depicted the synoptic scale development of storms that led to an anomalous precipitation pattern in the East Antarctic. We investigated the role of the upper level vs. lower level forcing in the formation of the contributing storms. The moisture and temperature anomalies of each case are evaluated in the context of synoptic and large-scale atmospheric forcing. We also performed sensitivity studies to determine the role of sea ice in the development of these systems.

Vertical profile, contamination assessment, and source apportionment of heavy metals in sediment cores of Kaohsiung Harbor, Taiwan.

PubMed

Chen, Chih-Feng; Ju, Yun-Ru; Chen, Chiu-Wen; Dong, Cheng-Di

2016-12-01

Six sediment cores collected at the Kaohsiung Harbor of Taiwan were analyzed to evaluate their vertical profiles, enrichments, accumulations, and source apportionments of heavy metals. This was performed to investigate any potential ecological risks posed by heavy metals. Results indicated that the mean heavy metal content (mg kg -1 ) in the six sediment cores was as follows: Hg (0.4-6.4), Cd (<0.05-2.4), Cr (18-820), Cu (16-760), Pb (31-140), and Zn (76-1900). The patterns of heavy metal content in the sediment cores differed substantially among the four river mouths. However, the vertical profiles of metals were relatively stable, indicating that wastewater has the constant characteristics and has been discharged into the rivers for a long period of time. Results of pollution assessment of enrichment factor, geo-accumulation index, and pollution load index revealed that river mouths experience severe enrichment, strong accumulation, and high contamination from the primary heavy metals. It was not consistent in the assessment results of mean effect range median quotient, potential ecological risk index, and total toxic unit method. Potential ecological risks caused by Hg in the sediments at Canon River and Love River mouths on aquatic organisms were extremely high. The estimates derived from the receptor modeling of multiple linear regression of the absolute principal component scores indicated that the contributions of the composite heavy metals derived from the Canon River and the Love River on the potential toxicity and risks to the water environment of Kaohsiung Harbor were highest, followed by those derived from Salt River and Jen-Gen River. Copyright © 2016 Elsevier Ltd. All rights reserved.

Producing physically consistent and bias free extreme precipitation events over the Switzerland: Bridging gaps between meteorology and impact models

NASA Astrophysics Data System (ADS)

José Gómez-Navarro, Juan; Raible, Christoph C.; Blumer, Sandro; Martius, Olivia; Felder, Guido

2016-04-01

Extreme precipitation episodes, although rare, are natural phenomena that can threat human activities, especially in areas densely populated such as Switzerland. Their relevance demands the design of public policies that protect public assets and private property. Therefore, increasing the current understanding of such exceptional situations is required, i.e. the climatic characterisation of their triggering circumstances, severity, frequency, and spatial distribution. Such increased knowledge shall eventually lead us to produce more reliable projections about the behaviour of these events under ongoing climate change. Unfortunately, the study of extreme situations is hampered by the short instrumental record, which precludes a proper characterization of events with return period exceeding few decades. This study proposes a new approach that allows studying storms based on a synthetic, but physically consistent database of weather situations obtained from a long climate simulation. Our starting point is a 500-yr control simulation carried out with the Community Earth System Model (CESM). In a second step, this dataset is dynamically downscaled with the Weather Research and Forecasting model (WRF) to a final resolution of 2 km over the Alpine area. However, downscaling the full CESM simulation at such high resolution is infeasible nowadays. Hence, a number of case studies are previously selected. This selection is carried out examining the precipitation averaged in an area encompassing Switzerland in the ESM. Using a hydrological criterion, precipitation is accumulated in several temporal windows: 1 day, 2 days, 3 days, 5 days and 10 days. The 4 most extreme events in each category and season are selected, leading to a total of 336 days to be simulated. The simulated events are affected by systematic biases that have to be accounted before this data set can be used as input in hydrological models. Thus, quantile mapping is used to remove such biases. For this task, a 20-yr high-resolution control simulation is carried out. The extreme events belong to this distribution, and can be mapped onto the distribution of precipitation obtained from a gridded product of precipitation provided by MeteoSwiss. This procedure yields bias-free extreme precipitation events which serve as input by hydrological models that eventually produce a simulated, yet physically consistent flooding event. Thereby, the proposed methodology guarantees consistency with the underlying physics of extreme events, and reproduces plausible impacts of up to one-in-five-centuries situations.

Accumulation of dislocation loops in the α phase of Zr Excel alloy under heavy ion irradiation

NASA Astrophysics Data System (ADS)

Yu, Hongbing; Yao, Zhongwen; Idrees, Yasir; Zhang, He K.; Kirk, Mark A.; Daymond, Mark R.

2017-08-01

In-situ heavy ion irradiations were performed on the high Sn content Zr alloy 'Excel', measuring type dislocation loop accumulation up to irradiation damage doses of 10 dpa at a range of temperatures. The high content of Sn, which diffuses slowly, and the thin foil geometry of the sample provide a unique opportunity to study an extreme case where displacement cascades dominate the loop formation and evolution. The dynamic observation of dislocation loop evolution under irradiation at 200 °C reveals that type dislocation loops can form at very low dose (0.0025 dpa). The size of the dislocation loops increases slightly with irradiation damage dose. The mechanism controlling loop growth in this study is different from that in neutron irradiation; in this study, larger dislocation loops can condense directly from the interaction of displacement cascades and the high concentration of point defects in the matrix. The size of the dislocation loop is dependent on the point defect concentration in the matrix. A negative correlation between the irradiation temperature and the dislocation loop size was observed. A comparison between cascade dominated loop evolution (this study), diffusion dominated loop evolution (electron irradiation) and neutron irradiation suggests that heavy ion irradiation alone may not be enough to accurately reproduce neutron irradiation induced loop structures. An alternative method is proposed in this paper. The effects of Sn on the displacement cascades, defect yield, and the diffusion behavior of point defects are established.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Oldham, D.W.

Commercial quantities of gas have been produced from shallow sandstone reservoirs of the Fort Union Formation (Paleocene) in the Powder River Basin of Wyoming. The two largest accumulations discovered to date, Oedekoven and Chan pools, were drilled on prospects which invoked differential compaction as a mechanism for gas entrapment and prospect delineation. Gas is believed to have accumulated in localized structural highs early in the burial history of lenticular sands. Structural relief is due to the compaction contrast between sand and stratigraphically-equivalent fine-grained sediments. A shallow Fort Union gas play was based on reports of shallow gas shows, the occurrencemore » of thick coals which could have served as sources for bacterial gas, and the presence of lenticular sandstones which may have promoted the development of compaction structures early in the burial process, to which bacterial gas migrated. Five geologic elements related to compactional trap development were used to rank prospects. Drilling of the Oedekoven prospect, which possessed all prospect elements, led to the discovery of the Oedekoven Fort Union gas pool at a depth of 340 ft (104 m). The uncemented, very fine grained, well-sorted {open_quotes}Canyon sand{close_quotes} pay has extremely high intergranular porosity. Low drilling and completion costs associated with shallow, high-permeability reservoirs, an abundance of subsurface control with which to delineate prospects, and existing gas-gathering systems make Fort Union sandstones attractive primary targets in shallow exploration efforts as well as secondary objectives in deeper drilling programs.« less

PEG-lipid micelles enable cholesterol efflux in Niemann-Pick Type C1 disease-based lysosomal storage disorder

PubMed Central

Brown, Anna; Patel, Siddharth; Ward, Carl; Lorenz, Anna; Ortiz, Mauren; DuRoss, Allison; Wieghardt, Fabian; Esch, Amanda; Otten, Elsje G.; Heiser, Laura M.; Korolchuk, Viktor I.; Sun, Conroy; Sarkar, Sovan; Sahay, Gaurav

2016-01-01

2-Hydroxy-propyl-β-cyclodextrin (HPβCD), a cholesterol scavenger, is currently undergoing Phase 2b/3 clinical trial for treatment of Niemann Pick Type C-1 (NPC1), a fatal neurodegenerative disorder that stems from abnormal cholesterol accumulation in the endo/lysosomes. Unfortunately, the extremely high doses of HPβCD required to prevent progressive neurodegeneration exacerbates ototoxicity, pulmonary toxicity and autophagy-based cellular defects. We present unexpected evidence that a poly (ethylene glycol) (PEG)-lipid conjugate enables cholesterol clearance from endo/lysosomes of Npc1 mutant (Npc1−/−) cells. Herein, we show that distearyl-phosphatidylethanolamine-PEG (DSPE-PEG), which forms 12-nm micelles above the critical micelle concentration, accumulates heavily inside cholesterol-rich late endosomes in Npc1−/− cells. This potentially results in cholesterol solubilization and leakage from lysosomes. High-throughput screening revealed that DSPE-PEG, in combination with HPβCD, acts synergistically to efflux cholesterol without significantly aggravating autophagy defects. These well-known excipients can be used as admixtures to treat NPC1 disorder. Increasing PEG chain lengths from 350 Da-30 kDa in DSPE-PEG micelles, or increasing DSPE-PEG content in an array of liposomes packaged with HPβCD, improved cholesterol egress, while Pluronic block copolymers capable of micelle formation showed slight effects at high concentrations. We postulate that PEG-lipid based nanocarriers can serve as bioactive drug delivery systems for effective treatment of lysosomal storage disorders. PMID:27572704

PEG-lipid micelles enable cholesterol efflux in Niemann-Pick Type C1 disease-based lysosomal storage disorder

NASA Astrophysics Data System (ADS)

Brown, Anna; Patel, Siddharth; Ward, Carl; Lorenz, Anna; Ortiz, Mauren; Duross, Allison; Wieghardt, Fabian; Esch, Amanda; Otten, Elsje G.; Heiser, Laura M.; Korolchuk, Viktor I.; Sun, Conroy; Sarkar, Sovan; Sahay, Gaurav

2016-08-01

2-Hydroxy-propyl-β-cyclodextrin (HPβCD), a cholesterol scavenger, is currently undergoing Phase 2b/3 clinical trial for treatment of Niemann Pick Type C-1 (NPC1), a fatal neurodegenerative disorder that stems from abnormal cholesterol accumulation in the endo/lysosomes. Unfortunately, the extremely high doses of HPβCD required to prevent progressive neurodegeneration exacerbates ototoxicity, pulmonary toxicity and autophagy-based cellular defects. We present unexpected evidence that a poly (ethylene glycol) (PEG)-lipid conjugate enables cholesterol clearance from endo/lysosomes of Npc1 mutant (Npc1-/-) cells. Herein, we show that distearyl-phosphatidylethanolamine-PEG (DSPE-PEG), which forms 12-nm micelles above the critical micelle concentration, accumulates heavily inside cholesterol-rich late endosomes in Npc1-/- cells. This potentially results in cholesterol solubilization and leakage from lysosomes. High-throughput screening revealed that DSPE-PEG, in combination with HPβCD, acts synergistically to efflux cholesterol without significantly aggravating autophagy defects. These well-known excipients can be used as admixtures to treat NPC1 disorder. Increasing PEG chain lengths from 350 Da-30 kDa in DSPE-PEG micelles, or increasing DSPE-PEG content in an array of liposomes packaged with HPβCD, improved cholesterol egress, while Pluronic block copolymers capable of micelle formation showed slight effects at high concentrations. We postulate that PEG-lipid based nanocarriers can serve as bioactive drug delivery systems for effective treatment of lysosomal storage disorders.

Development of accumulated heat stress index based on time-weighted function

NASA Astrophysics Data System (ADS)

Lee, Ji-Sun; Byun, Hi-Ryong; Kim, Do-Woo

2016-05-01

Heat stress accumulates in the human body when a person is exposed to a thermal condition for a long time. Considering this fact, we have defined the accumulated heat stress (AH) and have developed the accumulated heat stress index (AHI) to quantify the strength of heat stress. AH represents the heat stress accumulated in a 72-h period calculated by the use of a time-weighted function, and the AHI is a standardized index developed by the use of an equiprobability transformation (from a fitted Weibull distribution to the standard normal distribution). To verify the advantage offered by the AHI, it was compared with four thermal indices the humidex, the heat index, the wet-bulb globe temperature, and the perceived temperature used by national governments. AH and the AHI were found to provide better detection of thermal danger and were more useful than other indices. In particular, AH and the AHI detect deaths that were caused not only by extremely hot and humid weather, but also by the persistence of moderately hot and humid weather (for example, consecutive daily maximum temperatures of 28-32 °C), which the other indices fail to detect.

Vertical and lateral flux on the continental slope off Pakistan: correlation of sediment core and trap results

NASA Astrophysics Data System (ADS)

Schulz, H.; von Rad, U.

2014-06-01

Due to the lack of bioturbation, the varve-laminated muds from the oxygen minimum zone (OMZ) off Pakistan provide a unique opportunity to precisely determine the vertical and lateral sediment fluxes in the nearshore part of the northeastern Arabian Sea. West of Karachi (Hab area), the results of two sediment trap stations (EPT and WPT) were correlated with 16 short sediment cores on a depth transect crossing the OMZ. The top of a distinct, either reddish- or light-gray silt layer, 210Pb-dated as AD 1905 ± 10, was used as an isochronous stratigraphic marker bed to calculate sediment accumulation rates. In one core, the red and gray layer were separated by a few (5-10) thin laminae. According to our varve model, this contributes < 10 years to the dating uncertainty, assuming that the different layers are almost synchronous. We directly compared the accumulation rates with the flux rates from the sediment traps that collected the settling material within the water column above. All traps on the steep Makran continental slope show exceptionally high, pulsed winter fluxes of up to 5000 mg m-2 d-1. Based on core results, the flux at the seafloor amounts to 4000 mg m-2 d-1 and agrees remarkably well with the bulk winter flux of material, as well as with the flux of the individual bulk components of organic carbon, calcium carbonate and opal. However, due to the extreme mass of remobilized matter, the high winter flux events exceeded the capacity of the shallow traps. Based on our comparisons, we argue that high-flux events must occur regularly during winter within the upper OMZ off Pakistan to explain the high accumulations rates. These show distribution patterns that are a negative function of water depth and distance from the shelf. Some of the sediment fractions show marked shifts in accumulation rates near the lower boundary of the OMZ. For instance, the flux of benthic foraminifera is lowered but stable below ~1200-1300 m. However, flux and sedimentation in the upper eastern Makran area are dominated by the large amount of laterally advected fine-grained material and by the pulsed nature of the resuspension events at the upper margin during winter.

Flux and accumulation of sedimentary particles off the continental slope of Pakistan: a comparison of water column and seafloor estimates from the oxygen minimum zone, NE Arabian Sea

NASA Astrophysics Data System (ADS)

Schulz, H.; von Rad, U.

2013-07-01

Due to the lack of bioturbation, the laminated muds from the oxygen-minimum zone (OMZ) off Pakistan provide a unique opportunity to precisely determine the vertical and lateral sediment fluxes in the near shore part of the northeastern Arabian Sea, and to explore the effects of the margin topography and the low oxygen conditions on the accumulation of organic matter and other particles. West of Karachi, in the Hab river area of EPT and WPT (Eastern and Western PAKOMIN Traps), 16 short sediment profiles from water depths between 250 m and 1970 m on a depth transect crossing the OMZ (~ 120 to ~ 1200 m water depth) were investigated, and correlated on the basis of a thick, light-gray- to reddish-colored turbidite layer. Varve counting yielded a date for this layer of AD 1905 to 1888. We adopted the young age which agrees with 210Pb- dating, and used this isochronous stratigraphic marker bed to calculate sediment accumulation rates, that we could directly compare with the flux rates from the sediment traps installed within the water column above. All traps in the area show exceptionally high, pulsed winter fluxes of up to 5000 mg m-2 d-1 in this margin environment. The lithic flux at the sea floor is as high as 4000 mg m-2 d-1 , and agrees remarkably well with the bulk winter flux of material. This holds as well for the individual bulk components (organic carbon, calcium carbonate, opal, lithic fraction). However, the high winter flux events (HFE) by their extreme mass of remobilized matter terminated the recording in the shallow traps by clogging the funnels. Based on our comparisons, we argue that HFE for the past 5000 yr most likely occurred as regular events within the upper OMZ off Pakistan. Coarse fraction and foraminiferal accumulation rates from sediment surface samples along the Hab transect show distribution patterns that seem to be a function of water depth and distance from the shelf. Some of these sediment fractions show sudden shifts at the lower boundary of the OMZ. However, the potential effect of the OMZ on carbon preservation in the area would by masked by high mass of fine-grained matter laterally advected, and by the pulsed nature of the resuspension events.

Spitzenkorper, exocyst, and polarisome components in Candida albicans hyphae show different patterns of localization and have distinct dynamic properties.

PubMed

Jones, Laura A; Sudbery, Peter E

2010-10-01

During the extreme polarized growth of fungal hyphae, secretory vesicles are thought to accumulate in a subapical region called the Spitzenkörper. The human fungal pathogen Candida albicans can grow in a budding yeast or hyphal form. When it grows as hyphae, Mlc1 accumulates in a subapical spot suggestive of a Spitzenkörper-like structure, while the polarisome components Spa2 and Bud6 localize to a surface crescent. Here we show that the vesicle-associated protein Sec4 also localizes to a spot, confirming that secretory vesicles accumulate in the putative C. albicans Spitzenkörper. In contrast, exocyst components localize to a surface crescent. Using a combination of fluorescence recovery after photobleaching (FRAP) and fluorescence loss in photobleaching (FLIP) experiments and cytochalasin A to disrupt actin cables, we showed that Spitzenkörper-located proteins are highly dynamic. In contrast, exocyst and polarisome components are stably located at the cell surface. It is thought that in Saccharomyces cerevisiae exocyst components are transported to the cell surface on secretory vesicles along actin cables. If each vesicle carried its own complement of exocyst components, then it would be expected that exocyst components would be as dynamic as Sec4 and would have the same pattern of localization. This is not what we observe in C. albicans. We propose a model in which a stream of vesicles arrives at the tip and accumulates in the Spitzenkörper before onward delivery to the plasma membrane mediated by exocyst and polarisome components that are more stable residents of the cell surface.

Bioprospecting the thermal waters of the Roman baths: isolation of oleaginous species and analysis of the FAME profile for biodiesel production

PubMed Central

2013-01-01

The extensive diversity of microalgae provides an opportunity to undertake bioprospecting for species possessing features suited to commercial scale cultivation. The outdoor cultivation of microalgae is subject to extreme temperature fluctuations; temperature tolerant microalgae would help mitigate this problem. The waters of the Roman Baths, which have a temperature range between 39°C and 46°C, were sampled for microalgae. A total of 3 green algae, 1 diatom and 4 cyanobacterial species were successfully isolated into ‘unialgal’ culture. Four isolates were filamentous, which could prove advantageous for low energy dewatering of cultures using filtration. Lipid content, profiles and growth rates of the isolates were examined at temperatures of 20, 30, 40°C, with and without nitrogen starvation and compared against the oil producing green algal species, Chlorella emersonii. Some isolates synthesized high levels of lipids, however, all were most productive at temperatures lower than those of the Roman Baths. The eukaryotic algae accumulated a range of saturated and polyunsaturated FAMEs and all isolates generally showed higher lipid accumulation under nitrogen deficient conditions (Klebsormidium sp. increasing from 1.9% to 16.0% and Hantzschia sp. from 31.9 to 40.5%). The cyanobacteria typically accumulated a narrower range of FAMEs that were mostly saturated, but were capable of accumulating a larger quantity of lipid as a proportion of dry weight (M. laminosus, 37.8% fully saturated FAMEs). The maximum productivity of all the isolates was not determined in the current work and will require further effort to optimise key variables such as light intensity and media composition. PMID:23369619

FPGA-Based X-Ray Detection and Measurement for an X-Ray Polarimeter

NASA Technical Reports Server (NTRS)

Gregory, Kyle; Hill, Joanne; Black, Kevin; Baumgartner, Wayne

2013-01-01

This technology enables detection and measurement of x-rays in an x-ray polarimeter using a field-programmable gate array (FPGA). The technology was developed for the Gravitational and Extreme Magnetism Small Explorer (GEMS) mission. It performs precision energy and timing measurements, as well as rejection of non-x-ray events. It enables the GEMS polarimeter to detect precisely when an event has taken place so that additional measurements can be made. The technology also enables this function to be performed in an FPGA using limited resources so that mass and power can be minimized while reliability for a space application is maximized and precise real-time operation is achieved. This design requires a low-noise, charge-sensitive preamplifier; a highspeed analog to digital converter (ADC); and an x-ray detector with a cathode terminal. It functions by computing a sum of differences for time-samples whose difference exceeds a programmable threshold. A state machine advances through states as a programmable number of consecutive samples exceeds or fails to exceed this threshold. The pulse height is recorded as the accumulated sum. The track length is also measured based on the time from the start to the end of accumulation. For track lengths longer than a certain length, the algorithm estimates the barycenter of charge deposit by comparing the accumulator value at the midpoint to the final accumulator value. The design also employs a number of techniques for rejecting background events. This innovation enables the function to be performed in space where it can operate autonomously with a rapid response time. This implementation combines advantages of computing system-based approaches with those of pure analog approaches. The result is an implementation that is highly reliable, performs in real-time, rejects background events, and consumes minimal power.

Accumulated lipids rather than the rigid cell walls impede the extraction of genetic materials for effective colony PCRs in Chlorella vulgaris

PubMed Central

2013-01-01

Background Failure of colony PCRs in green microalga Chlorella vulgaris is typically attributed to the difficulty in disrupting its notoriously rigid cell walls for releasing the genetic materials and therefore the development of an effective colony PCR procedure in C. vulgaris presents a challenge. Results Here we identified that colony PCR results were significantly affected by the accumulated lipids rather than the rigid cell walls of C. vulgaris. The higher lipids accumulated in C. vulgaris negatively affects the effective amplification by DNA polymerase. Based on these findings, we established a simple and extremely effective colony PCR procedure in C. vulgaris. By simply pipetting/votexing the pellets of C. vulgaris in 10 ul of either TE (10 mM Tris/1 mM EDTA) or 0.2% SDS buffer at room temperature, followed by the addition of 10 ul of either hexane or Phenol:Chloroform:Isoamyl Alcohol in the same PCR tube for extraction. The resulting aqueous phase was readily PCR-amplified as genomic DNA templates as demonstrated by successful amplification of the nuclear 18S rRNA and the chloroplast rbcL gene. This colony PCR protocol is effective and robust in C. vulgaris and also demonstrates its effectiveness in other Chlorella species. Conclusions The accumulated lipids rather than the rigid cell walls of C. vulgaris significantly impede the extraction of genetic materials and subsequently the effective colony PCRs. The finding has the potential to aid the isolation of high-quality total RNAs and mRNAs for transcriptomic studies in addition to the genomic DNA isolation in Chlorella. PMID:24219401

Evaluation of Various Radar Data Quality Control Algorithms Based on Accumulated Radar Rainfall Statistics

NASA Technical Reports Server (NTRS)

Robinson, Michael; Steiner, Matthias; Wolff, David B.; Ferrier, Brad S.; Kessinger, Cathy; Einaudi, Franco (Technical Monitor)

2000-01-01

The primary function of the TRMM Ground Validation (GV) Program is to create GV rainfall products that provide basic validation of satellite-derived precipitation measurements for select primary sites. A fundamental and extremely important step in creating high-quality GV products is radar data quality control. Quality control (QC) processing of TRMM GV radar data is based on some automated procedures, but the current QC algorithm is not fully operational and requires significant human interaction to assure satisfactory results. Moreover, the TRMM GV QC algorithm, even with continuous manual tuning, still can not completely remove all types of spurious echoes. In an attempt to improve the current operational radar data QC procedures of the TRMM GV effort, an intercomparison of several QC algorithms has been conducted. This presentation will demonstrate how various radar data QC algorithms affect accumulated radar rainfall products. In all, six different QC algorithms will be applied to two months of WSR-88D radar data from Melbourne, Florida. Daily, five-day, and monthly accumulated radar rainfall maps will be produced for each quality-controlled data set. The QC algorithms will be evaluated and compared based on their ability to remove spurious echoes without removing significant precipitation. Strengths and weaknesses of each algorithm will be assessed based on, their abilit to mitigate both erroneous additions and reductions in rainfall accumulation from spurious echo contamination and true precipitation removal, respectively. Contamination from individual spurious echo categories will be quantified to further diagnose the abilities of each radar QC algorithm. Finally, a cost-benefit analysis will be conducted to determine if a more automated QC algorithm is a viable alternative to the current, labor-intensive QC algorithm employed by TRMM GV.

Accumulation of human T lymphotropic virus (HTLV)-I-specific T cell clones in HTLV-I-associated myelopathy/tropical spastic paraparesis patients.

PubMed

Höger, T A; Jacobson, S; Kawanishi, T; Kato, T; Nishioka, K; Yamamoto, K

1997-08-15

Human T lymphotropic virus type I (HTLV-I)-associated myelopathy/tropical spastic paraperesis (HAM/TSP) is a slowly progressive neurologic disorder following infection with HTLV-I. It is characterized by spasticity and hyper-reflexia of the lower extremities, urinary bladder disturbance, lower extremity muscle weakness, and sensory disturbances. HTLV-I, as an inducer of a strong humoral and cytotoxic response, is a well-known pathogenic factor for the progression of HAM/TSP. Peptides derived from proviral tax and env genes provide epitopes recognized by T cells. We herein report an accumulation of distinct clonotypes of alpha/beta TCR+ peripheral blood T lymphocytes from HAM/TSP patients in comparison with that observed in both asymptomatic carriers and healthy controls, using the reverse-transcriptase PCR/single-strand conformation polymorphism method. We also found that some of the accumulated T cell clones in the peripheral blood and cerebrospinal fluid are HTLV-I Tax(11-19) peptide specific. Such clones were found to expand strongly after being cultured with an HTLV-I Tax(11-19) peptide. Moreover, the cultured samples exhibited a strong MHC class I-restricted cytotoxic activity against HTLV-I Tax(11-19) peptide-expressing targets, and therefore most likely also include the disease-associated T cell clones observed in the patients. This is the first report of a direct assessment of Ag-specific T cell responses in fresh PBL and cerebrospinal fluid.

Overexpression of Arabidopsis VIT1 increases accumulation of iron in cassava roots and stems

USDA-ARS?s Scientific Manuscript database

Iron is extremely abundant in the soil, but its uptake in plants is limited due to low solubility in neutral or alkaline soils. Plants can rely on rhizosphere acidification to increase iron solubility. AtVIT1 was previously found to be involved in mediating vacuolar sequestration of iron, which indi...

The value of crossdating to retain high-frequency variability, climate signals, and extreme events in environmental proxies.

PubMed

Black, Bryan A; Griffin, Daniel; van der Sleen, Peter; Wanamaker, Alan D; Speer, James H; Frank, David C; Stahle, David W; Pederson, Neil; Copenheaver, Carolyn A; Trouet, Valerie; Griffin, Shelly; Gillanders, Bronwyn M

2016-07-01

High-resolution biogenic and geologic proxies in which one increment or layer is formed per year are crucial to describing natural ranges of environmental variability in Earth's physical and biological systems. However, dating controls are necessary to ensure temporal precision and accuracy; simple counts cannot ensure that all layers are placed correctly in time. Originally developed for tree-ring data, crossdating is the only such procedure that ensures all increments have been assigned the correct calendar year of formation. Here, we use growth-increment data from two tree species, two marine bivalve species, and a marine fish species to illustrate sensitivity of environmental signals to modest dating error rates. When falsely added or missed increments are induced at one and five percent rates, errors propagate back through time and eliminate high-frequency variability, climate signals, and evidence of extreme events while incorrectly dating and distorting major disturbances or other low-frequency processes. Our consecutive Monte Carlo experiments show that inaccuracies begin to accumulate in as little as two decades and can remove all but decadal-scale processes after as little as two centuries. Real-world scenarios may have even greater consequence in the absence of crossdating. Given this sensitivity to signal loss, the fundamental tenets of crossdating must be applied to fully resolve environmental signals, a point we underscore as the frontiers of growth-increment analysis continue to expand into tropical, freshwater, and marine environments. © 2016 John Wiley & Sons Ltd.

Episode of intense chemical weathering during the termination of the 635 Ma Marinoan glaciation

PubMed Central

Huang, Kang-Jun; Teng, Fang-Zhen; Shen, Bing; Xiao, Shuhai; Lang, Xianguo; Ma, Hao-Ran; Fu, Yong; Peng, Yongbo

2016-01-01

Cryogenian (∼720–635 Ma) global glaciations (the snowball Earth) represent the most extreme ice ages in Earth’s history. The termination of these snowball Earth glaciations is marked by the global precipitation of cap carbonates, which are interpreted to have been driven by intense chemical weathering on continents. However, direct geochemical evidence for the intense chemical weathering in the aftermath of snowball glaciations is lacking. Here, we report Mg isotopic data from the terminal Cryogenian or Marinoan-age Nantuo Formation and the overlying cap carbonate of the basal Doushantuo Formation in South China. A positive excursion of extremely high δ26Mg values (+0.56 to +0.95)—indicative of an episode of intense chemical weathering—occurs in the top Nantuo Formation, whereas the siliciclastic component of the overlying Doushantuo cap carbonate has significantly lower δ26Mg values (<+0.40), suggesting moderate to low intensity of chemical weathering during cap carbonate deposition. These observations suggest that cap carbonate deposition postdates the climax of chemical weathering, probably because of the suppression of carbonate precipitation in an acidified ocean when atmospheric CO2 concentration was high. Cap carbonate deposition did not occur until chemical weathering had consumed substantial amounts of atmospheric CO2 and accumulated high levels of oceanic alkalinity. Our finding confirms intense chemical weathering at the onset of deglaciation but indicates that the maximum weathering predated cap carbonate deposition. PMID:27956606

Achieving Extreme Utilization of Excitons by an Efficient Sandwich-Type Emissive Layer Architecture for Reduced Efficiency Roll-Off and Improved Operational Stability in Organic Light-Emitting Diodes.

PubMed

Wu, Zhongbin; Sun, Ning; Zhu, Liping; Sun, Hengda; Wang, Jiaxiu; Yang, Dezhi; Qiao, Xianfeng; Chen, Jiangshan; Alshehri, Saad M; Ahamad, Tansir; Ma, Dongge

2016-02-10

It has been demonstrated that the efficiency roll-off is generally caused by the accumulation of excitons or charge carriers, which is intimately related to the emissive layer (EML) architecture in organic light-emitting diodes (OLEDs). In this article, an efficient sandwich-type EML structure with a mixed-host EML sandwiched between two single-host EMLs was designed to eliminate this accumulation, thus simultaneously achieving high efficiency, low efficiency roll-off and good operational stability in the resulting OLEDs. The devices show excellent electroluminescence performances, realizing a maximum external quantum efficiency (EQE) of 24.6% with a maximum power efficiency of 105.6 lm W(-1) and a maximum current efficiency of 93.5 cd A(-1). At the high brightness of 5,000 cd m(-2), they still remain as high as 23.3%, 71.1 lm W(-1), and 88.3 cd A(-1), respectively. And, the device lifetime is up to 2000 h at initial luminance of 1000 cd m(-2), which is significantly higher than that of compared devices with conventional EML structures. The improvement mechanism is systematically studied by the dependence of the exciton distribution in EML and the exciton quenching processes. It can be seen that the utilization of the efficient sandwich-type EML broadens the recombination zone width, thus greatly reducing the exciton quenching and increasing the probability of the exciton recombination. It is believed that the design concept provides a new avenue for us to achieve high-performance OLEDs.

Effect of regional slopes on local structure and exploration of tilted paleo-highs

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nazarov, D.A.; Chernobrov, B.S.

1986-06-01

Prospects for discovering local highs in old petroleum-producing regions have by now been substantially exhausted. Hence it is of great importance at this stage to seek non-anticlinal accumulations of hydrocarbons, including those in traps genetically associated with tilted paleo-highs, often represented in the modern structural plan by structural noses and terraces. Appropriate exploration for such types of deposits may soon become important in Ciscaucasia and other old petroleum-producing regions. Consequently, problems of the scientific basis for prospecting paleo-highs tilted in the modern structural plan, and developing procedures both for revealing and also for assessing their expression in the structural planmore » during different stages of geological history, and establishing the time and depth of changes in aspect, will become extremely topical. In order to discover possible local highs and to study their features within the margins of the platformal basins and the platformal edges of the marginal troughs, the authors use the method of removing the effect of the regional slope on the local structural plan. This paper describes this method. 13 references.« less

Biofilm lifestyle enhances diesel bioremediation and biosurfactant production in the Antarctic polyhydroxyalkanoate producer Pseudomonas extremaustralis.

PubMed

Tribelli, Paula M; Di Martino, Carla; López, Nancy I; Raiger Iustman, Laura J

2012-09-01

Diesel is a widely distributed pollutant. Bioremediation of this kind of compounds requires the use of microorganisms able to survive and adapt to contaminated environments. Pseudomonas extremaustralis is an Antarctic bacterium with a remarkable survival capability associated to polyhydroxyalkanoates (PHAs) production. This strain was used to investigate the effect of cell growth conditions--in biofilm versus shaken flask cultures--as well as the inocula characteristics associated with PHAs accumulation, on diesel degradation. Biofilms showed increased cell growth, biosurfactant production and diesel degradation compared with that obtained in shaken flask cultures. PHA accumulation decreased biofilm cell attachment and enhanced biosurfactant production. Degradation of long-chain and branched alkanes was observed in biofilms, while in shaken flasks only medium-chain length alkanes were degraded. This work shows that the PHA accumulating bacterium P. extremaustralis can be a good candidate to be used as hydrocarbon bioremediation agent, especially in extreme environments.

Muver, a computational framework for accurately calling accumulated mutations.

PubMed

Burkholder, Adam B; Lujan, Scott A; Lavender, Christopher A; Grimm, Sara A; Kunkel, Thomas A; Fargo, David C

2018-05-09

Identification of mutations from next-generation sequencing data typically requires a balance between sensitivity and accuracy. This is particularly true of DNA insertions and deletions (indels), that can impart significant phenotypic consequences on cells but are harder to call than substitution mutations from whole genome mutation accumulation experiments. To overcome these difficulties, we present muver, a computational framework that integrates established bioinformatics tools with novel analytical methods to generate mutation calls with the extremely low false positive rates and high sensitivity required for accurate mutation rate determination and comparison. Muver uses statistical comparison of ancestral and descendant allelic frequencies to identify variant loci and assigns genotypes with models that include per-sample assessments of sequencing errors by mutation type and repeat context. Muver identifies maximally parsimonious mutation pathways that connect these genotypes, differentiating potential allelic conversion events and delineating ambiguities in mutation location, type, and size. Benchmarking with a human gold standard father-son pair demonstrates muver's sensitivity and low false positive rates. In DNA mismatch repair (MMR) deficient Saccharomyces cerevisiae, muver detects multi-base deletions in homopolymers longer than the replicative polymerase footprint at rates greater than predicted for sequential single-base deletions, implying a novel multi-repeat-unit slippage mechanism. Benchmarking results demonstrate the high accuracy and sensitivity achieved with muver, particularly for indels, relative to available tools. Applied to an MMR-deficient Saccharomyces cerevisiae system, muver mutation calls facilitate mechanistic insights into DNA replication fidelity.

Cryoconites from Alpine glaciers: Radionuclide accumulation and age estimation with Pu and Cs isotopes and 210Pb.

PubMed

Wilflinger, T; Lettner, H; Hubmer, A; Bossew, P; Sattler, B; Slupetzky, H

2018-06-01

Cryoconites ("cold dust", derived from the Greek) are aeolian sediments accumulated on glacier surfaces. In cryoconites from the surface of the Stubacher Sonnblickkees, a temperate Austrian glacier, extremely high activity concentrations of artificial and natural radionuclides were found. Artificial radionuclides stem from two clearly distinguishable sources, global fallout from the nuclear weapons testing era deposited over a period of years until roughly 1966 and the fallout from Chernobyl in 1986, which was essentially deposited as a single input during one week. Anthropogenic radionuclides identified were 137 Cs, 134 Cs, 238 Pu, 239+240 Pu, 90 Sr, 241 Am, 60 Co, 125 Sb, 154 Eu, and 207 Bi. The naturally occurring radionuclides detected were the long-lived radon decay product 210 Pb, the primordial radionuclide 4  K and the cosmogenic 7 Be. Isotopic ratios of 134 Cs/ 137 Cs and 239+240 Pu/ 238 Pu were used to separate the nuclide inventory into the contributions of the two aforementioned sources, which show varying degrees of mixing and provide information on the mixing age of the cryoconites. Since isotopic ratios of Pu often have high uncertainties due to low absolute concentrations, age estimation based on this method can be quite inaccurate. Additional information about the age of cryoconites was obtained through analysis of 210 Pb, which is constantly deposited over time. Copyright © 2017. Published by Elsevier Ltd.

Habitable planets with high obliquities

NASA Technical Reports Server (NTRS)

Williams, D. M.; Kasting, J. F.

1997-01-01

Earth's obliquity would vary chaotically from 0 degrees to 85 degrees were it not for the presence of the Moon (J. Laskar, F. Joutel, and P. Robutel, 1993, Nature 361, 615-617). The Moon itself is thought to be an accident of accretion, formed by a glancing blow from a Mars-sized planetesimal. Hence, planets with similar moons and stable obliquities may be extremely rare. This has lead Laskar and colleagues to suggest that the number of Earth-like planets with high obliquities and temperate, life-supporting climates may be small. To test this proposition, we have used an energy-balance climate model to simulate Earth's climate at obliquities up to 90 degrees. We show that Earth's climate would become regionally severe in such circumstances, with large seasonal cycles and accompanying temperature extremes on middle- and high-latitude continents which might be damaging to many forms of life. The response of other, hypothetical, Earth-like planets to large obliquity fluctuations depends on their land-sea distribution and on their position within the habitable zone (HZ) around their star. Planets with several modest-sized continents or equatorial supercontinents are more climatically stable than those with polar supercontinents. Planets farther out in the HZ are less affected by high obliquities because their atmospheres should accumulate CO2 in response to the carbonate-silicate cycle. Dense, CO2-rich atmospheres transport heat very effectively and therefore limit the magnitude of both seasonal cycles and latitudinal temperature gradients. We conclude that a significant fraction of extrasolar Earth-like planets may still be habitable, even if they are subject to large obliquity fluctuations.

Modulation of photosynthetic activity and photoprotection in Haematococcus pluvialis cells during their conversion into haematocysts and back.

PubMed

Chekanov, Konstantin; Lukyanov, Alexander; Boussiba, Sammy; Aflalo, Claude; Solovchenko, Alexei

2016-06-01

The engagement of different photoprotective mechanisms in the cells of the carotenogenic astaxanthin-accumulating chlorophyte Haematococcus pluvialis (i) under favorable conditions, (ii) in the course of stress-induced haematocyst formation and (iii) during recovery from the stress was studied. To this end, we followed the changes in primary photochemistry, electron flow at the acceptor side of photosystem II, and non-photochemical quenching (NPQ) using PAM chlorophyll fluorimetry. A general trend recorded in the stressed cells undergoing transition to haematocysts (and reversed during recovery from the stress) was a gradual reduction of the photosynthetic apparatus accompanied by down-regulation of energy-dependent photoprotective mechanisms such as NPQ, along with the accumulation of astaxanthin. On this background, a transient up-regulation of the photosynthetic activity was detected at the intermediated stages (20-50 h of the stress exposure) of haematocyst formation. This phenomenon was tentatively related with the peak of metabolic activity found earlier in the forming haematocysts. The role of secondary carotenogenesis coupled with a reversible transition from 'active' (energy-dependent) to 'passive' photoprotective mechanisms in the extremely high stress tolerance of carotenogenic phototrophs is discussed.

Gene expression changes in medical workers exposed to radiation.

PubMed

Morandi, Elena; Severini, Cinzia; Quercioli, Daniele; Perdichizzi, Stefania; Mascolo, Maria Grazia; Horn, Wolfango; Vaccari, Monica; Nucci, Maria Concetta; Lodi, Vittorio; Violante, Francesco Saverio; Bolognesi, Claudia; Grilli, Sandro; Silingardi, Paola; Colacci, Annamaria

2009-10-01

The use of nuclear resources for medical purposes causes considerable concern about occupational exposure. Nevertheless, little information is available regarding the effects of low-dose irradiations protracted over time. We used oligomicroarrays to identify the genes that are transcriptionally regulated by persistent exposure to extremely low doses of ionizing radiation in 28 exposed professionals (mean cumulative effective dose +/- SD, 19 +/- 38 mSv) compared with a matched sample of nonexposed subjects. We identified 256 modulated genes from peripheral blood mononuclear cells profiles, and the main biological processes we found were DNA packaging and mitochondrial electron transport NADH to ubiquinone. Next we investigated whether a different pattern existed when only 22 exposed subjects with accumulated doses >2.5 mSv, a threshold corresponding to the natural background radiation in Italy per year, and mean equal to 25 +/- 41 mSv were used. In addition to DNA packaging and NADH dehydrogenase function, the analysis of the higher-exposed subgroup revealed a significant modulation of ion homeostasis and programmed cell death as well. The changes in gene expression that we found suggest different mechanisms from those involved in high-dose studies that may help to define new biomarkers of radiation exposure for accumulated doses below 25 mSv.

Chronic active Epstein-Barr virus infection associated with mutations in perforin that impair its maturation.

PubMed

Katano, Harutaka; Ali, Mir A; Patera, Andriani C; Catalfamo, Marta; Jaffe, Elaine S; Kimura, Hiroshi; Dale, Janet K; Straus, Stephen E; Cohen, Jeffrey I

2004-02-15

Chronic active Epstein-Barr virus infection (CAEBV) is a rare disease in which previously healthy persons develop severe, life-threatening illness. Mutations in the perforin gene have been found in familial hemophagocytic lymphohistiocytosis, which shares some features with CAEBV. We studied a patient who died at age 18, 10 years after the onset of CAEBV. The patient had high titers of antibodies to EBV, EBV RNA in lymph nodes, T-cell lymphoproliferative disease, and hemophagocytic lymphohistiocytosis. DNA sequencing showed novel mutations in both alleles of the perforin gene that resulted in amino acid changes in the protein. The quantity of the native form of perforin from the patient's stimulated peripheral blood mononuclear cells (PBMCs) was extremely low and immunoblotting showed accumulation of an uncleaved precursor form of perforin. Stimulated PBMCs from the patient were defective for Fas-independent cytotoxicity. These data imply that mutations in this patient resulted in reduced perforin-mediated cytotoxicity by his lymphocytes. This is the first case in which perforin mutations have been shown to result in accumulation of the uncleaved, immature form of perforin. Mutations in the perforin gene are associated with some cases of CAEBV with hemophagocytic lymphohistiocytosis.

Prodigious degassing of a billion years of accumulated radiogenic helium at Yellowstone

USGS Publications Warehouse

Lowenstern, Jacob B.; Evans, William C.; Bergfeld, D.; Hunt, Andrew G.

2014-01-01

Helium is used as a critical tracer throughout the Earth sciences, where its relatively simple isotopic systematics is used to trace degassing from the mantle, to date groundwater and to time the rise of continents1. The hydrothermal system at Yellowstone National Park is famous for its high helium-3/helium-4 isotope ratio, commonly cited as evidence for a deep mantle source for the Yellowstone hotspot2. However, much of the helium emitted from this region is actually radiogenic helium-4 produced within the crust by α-decay of uranium and thorium. Here we show, by combining gas emission rates with chemistry and isotopic analyses, that crustal helium-4 emission rates from Yellowstone exceed (by orders of magnitude) any conceivable rate of generation within the crust. It seems that helium has accumulated for (at least) many hundreds of millions of years in Archaean (more than 2.5 billion years old) cratonic rocks beneath Yellowstone, only to be liberated over the past two million years by intense crustal metamorphism induced by the Yellowstone hotspot. Our results demonstrate the extremes in variability of crustal helium efflux on geologic timescales and imply crustal-scale open-system behaviour of helium in tectonically and magmatically active regions.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Osmanlioglu, Ahmet Erdal

Available in abstract form only. Full text of publication follows: Naturally occurring radioactive material (NORM) in concentrated forms arises both in industry and in nature where natural radioisotopes accumulate at particular sites. Technically enhanced naturally occurring radioactive materials (TE-NORM) often occurs in an acidic environment where precipitates containing radionuclides plate out onto pipe walls, filters, tank linings, etc. Because of the radionuclides are selectively deposited at these sites, radioactivity concentration is extremely higher than the natural concentration. This paper presents characterization and related considerations of TE-NORM wastes in Turkey. Generally, accumulation conditions tend to favour the build-up of radium. Asmore » radium is highly radio-toxic, handling, treatment, storage and disposal of such material requires careful management. Turkey has the only low level waste processing and storage facility (WPSF) in Istanbul. This facility has interim storage buildings and storage area for storage of packaged radioactive waste which are containing artificial radioisotopes, but there is an increasing demand for the storage to accept bulk concentrated TE-NORM wastes from iron-steel and related industries. Most of these wastes generated from scrap metal piles which are imported from other countries. These wastes generally contain radium. (authors)« less

A Simple Model of Global Aerosol Indirect Effects

NASA Technical Reports Server (NTRS)

Ghan, Steven J.; Smith, Steven J.; Wang, Minghuai; Zhang, Kai; Pringle, Kirsty; Carslaw, Kenneth; Pierce, Jeffrey; Bauer, Susanne; Adams, Peter

2013-01-01

Most estimates of the global mean indirect effect of anthropogenic aerosol on the Earth's energy balance are from simulations by global models of the aerosol lifecycle coupled with global models of clouds and the hydrologic cycle. Extremely simple models have been developed for integrated assessment models, but lack the flexibility to distinguish between primary and secondary sources of aerosol. Here a simple but more physically based model expresses the aerosol indirect effect (AIE) using analytic representations of cloud and aerosol distributions and processes. Although the simple model is able to produce estimates of AIEs that are comparable to those from some global aerosol models using the same global mean aerosol properties, the estimates by the simple model are sensitive to preindustrial cloud condensation nuclei concentration, preindustrial accumulation mode radius, width of the accumulation mode, size of primary particles, cloud thickness, primary and secondary anthropogenic emissions, the fraction of the secondary anthropogenic emissions that accumulates on the coarse mode, the fraction of the secondary mass that forms new particles, and the sensitivity of liquid water path to droplet number concentration. Estimates of present-day AIEs as low as 5 W/sq m and as high as 0.3 W/sq m are obtained for plausible sets of parameter values. Estimates are surprisingly linear in emissions. The estimates depend on parameter values in ways that are consistent with results from detailed global aerosol-climate simulation models, which adds to understanding of the dependence on AIE uncertainty on uncertainty in parameter values.

Complexities of plinian fall deposition at vent: An example from the 1912 Novarupta eruption (Alaska)

USGS Publications Warehouse

Fierstein, J.; Houghton, Bruce F.; Wilson, C.J.N.; Hildreth, W.

1997-01-01

An extremely proximal ejecta ring, with exposures to within 100 m of vent, was deposited during later-stage plinian fall activity during the 1912 Novarupta eruption in Alaska. One bed in the ejecta ring (bed S) contains predominantly andesitic clasts which serve to delineate the striking contrast in thinning rates along dispersal axis of the ejecta ring [Pyle bt values of 70 m (bed S alone) or 190 m (whole ejecta ring)] and the coeval dacitic plinian fall deposits [Pyle bt, values of 4 km (proximal) and 37 km (medial-distal)]. The locally deposited andesitic and dacitic clasts of the ejecta ring are interpreted as products of an irregular 'collar' of low-fountaining ejecta partially sheathing the core of higher-velocity dacitic ejecta that fed the stable, convecting 23-km-high column. The presence of such an extremely proximal accumulation of ejecta appears to be a feature common to several other historic eruptions that generated widespread fall deposits. This feature in part accounts for conflicts between measured and calculated values for thickness maxima in plinian fall deposits and suggests that modifications may be required of existing models for plinian eruption columns.

Climate extremes and the carbon cycle - a review using an integrated approach with regional examples for forests & native ecosystems -

NASA Astrophysics Data System (ADS)

Frank, D.; Reichstein, M.; Bahn, M.; Beer, C.; Ciais, P.; Mahecha, M.; Seneviratne, S. I.; Smith, P.; van Oijen, M.; Walz, A.

2012-04-01

The terrestrial carbon cycle provides an important biogeochemical feedback to climate and is itself particularly susceptible to extreme climate events. Climate extremes can override any (positive) effects of mean climate change as shown in European and recent US-American heat waves and dry spells. They can impact the structure, composition, and functioning of terrestrial ecosystems and have the potential to cause rapid carbon losses from accumulated stocks. We review how climate extremes like severe droughts, heat waves, extreme precipitation or storms can cause direct impacts on the CO2 fluxes [e.g. due to extreme temperature and/ or drought events] as well as lagged impacts on the carbon cycle [e.g. via an increased fire risk, or disease outbreaks and pest invasions]. The relative impact of the different climate extremes varies according to climate region and vegetation type. We present lagged effects on plant growth (and mortality) in the year(s) following an extreme event and their impacts on the carbon sequestration of forests and natural ecosystems. Comprehensive regional or even continental quantification with regard to extreme events is missing, and especially compound extreme events, the role of lagged effects and aspects of the return frequency are not studied enough. In a case study of a Mediterranean ecosystem we illustrate that the response of the net carbon balance at ecosystem level to regional climate change is hard to predict as interacting and partly compensating processes are affected and several processes which have the ability to substantially alter the carbon balance are not or not sufficiently represented in state-of-the-art biogeochemical models.

Variability in Proline-Accumulating Ability of Barley (Hordeum vulgare L.) Cultivars Induced by Vapor Pressure Deficit 1

PubMed Central

Naidu, Bodapati P.; Aspinall, Donald; Paleg, Leslie G.

1992-01-01

This work was undertaken in an effort to reconcile the conflicting proline-accumulating responses of the barley (Hordeum vulgare L.) cultivars, Excelsior and Proctor, reported by Singh et al. (1972) and Hanson et al. (1976). It deals with the effects of different vapor pressure deficits (VPD) during growth and subsequent drought stress on several barley cultivars. A higher VPD (1.2 kilopascals) during Clipper seedling growth resulted in higher solute-accumulating ability, seemingly independently of leaf water potential, than a lower VPD (0.12 kilopascals). The higher VPD during stress also resulted in higher solute contents, and this response may be more closely related to leaf water potential. When the responses of Excelsior and Proctor were examined in detail, it was found that the relative proline-accumulating ability of the two cultivars was dependent upon the VPD under which they were grown. At low VPD, Proctor accumulated significantly more proline than did Excelsior; whereas at higher VPD, Excelsior accumulated more proline than did Proctor. The crossover occurred at a VPD of about 0.72 kilopascals. This reversal of cultivar response was enhanced by multiplying seed under the two VPD extremes. Glycinebetaine accumulation did not demonstrate the crossover effect, although the concentration of this compound in all cultivars also depended on the VPD prevailing during growth and/or stress. Solute levels, in general, were more closely related to the decrease in relative water content than to a decrease in leaf water potential. It is concluded that the conflicting proline-accumulating responses of Excelsior and Proctor could be explained by these findings. PMID:16668700

Individual Members of the Cab Gene Family Differ Widely in Fluence Response.

PubMed Central

White, M. J.; Kaufman, L. S.; Horwitz, B. A.; Briggs, W. R.; Thompson, W. F.

1995-01-01

Chlorophyll a/b-binding protein genes (Cab genes) can be extremely sensitive to light. Transcript accumulation following a red light pulse increases with fluence over 8 orders of magnitude (L.S. Kaufman, W.F. Thompson, W.R. Briggs [1984] Science 226: 1447-1449). We have constructed fluence-response curves for individual Cab genes. At least two Cab genes (Cab-8 and AB96) show a very low fluence response to a single red light pulse. In contrast, two other Cab genes (AB80 and AB66) fail to produce detectable transcript following a single pulse of either red or blue light but are expressed in continuous red light. Thus, very low fluence responses and high irradiance responses occur in the same gene family. PMID:12228352

Discovery of extremely halophilic, methyl-reducing euryarchaea provides insights into the evolutionary origin of methanogenesis

PubMed Central

Sorokin, Dimitry Y.; Makarova, Kira S.; Abbas, Ben; Ferrer, Manuel; Golyshin, Peter N.; Galinski, Erwin A.; Ciordia, Sergio; Mena, María Carmen; Merkel, Alexander Y.; Wolf, Yuri I.; van Loosdrecht, Mark C.M.; Koonin, Eugene V.

2017-01-01

Methanogenic archaea are major players in the global carbon cycle and in the biotechnology of anaerobic digestion. The phylum Euryarchaeota includes diverse groups of methanogens that are interspersed with non-methanogenic lineages. So far methanogens inhabiting hypersaline environments have been identified only within the order Methanosarcinales. We report the discovery of a deep phylogenetic lineage of extremophilic methanogens in hypersaline lakes, and present analysis of two nearly complete genomes from this group. Within the phylum Euryarchaeota, these isolates form a separate, class-level lineage “Methanonatronarchaeia” that is most closely related to the class Halobacteria. Similar to the Halobacteria, “Methanonatronarchaeia” are extremely halophilic and do not accumulate organic osmoprotectants. The high intracellular concentration of potassium implies that “Methanonatronarchaeia” employ the “salt-in” osmoprotection strategy. These methanogens are heterotrophic methyl-reducers that utilize C1-methylated compounds as electron acceptors and formate or hydrogen as electron donors. The genomes contain an incomplete and apparently inactivated set of genes encoding the upper branch of methyl group oxidation to CO2 as well as membrane-bound heterosulfide reductase and cytochromes. These features differentiates “Methanonatronarchaeia” from all known methyl-reducing methanogens. The discovery of extremely halophilic, methyl-reducing methanogens related to haloarchaea provides insights into the origin of methanogenesis and shows that the strategies employed by methanogens to thrive in salt-saturating conditions are not limited to the classical methylotrophic pathway. PMID:28555626

Time-dependent constitutive modeling of drive belts—II. The effect of the shape of material retardation spectrum on the strain accumulation process

NASA Astrophysics Data System (ADS)

Zupančič, B.; Emri, I.

2009-11-01

This is the second paper in the series addressing the constitutive modeling of dynamically loaded elastomeric products such as power transmission belts. During the normal operation of such belts certain segments of the belt structure are loaded via tooth-like cyclical loading. When the time-dependent properties of the elastomeric material “match” the time-scale of the dynamic loading a strain accumulation (incrementation) process occurs. It was shown that the location of a critical rotation speed strongly depends on the distribution (shape) of the retardation spectrum, whereas the magnitude of the accumulated strain is governed by the strength of the corresponding spectrum lines. These interrelations are extremely non-linear. The strain accumulation process is most intensive at the beginning of the drive belt operation, and is less intensive for longer belts. The strain accumulation process is governed by the spectrum lines that are positioned within a certain region, which we call the Strain Accumulation Window (SAW). An SAW is always located to the right of the spectrum line, L i , at log ( ω λ i )=0, where ω is the operational angular velocity. The width of the SAW depends on the width of the material spectrum. Based on the following analysis a new designing criterion is proposed for use in engineering applications for selecting a proper material for general drive-belt operations.

Role of Wax Ester Synthase/Acyl Coenzyme A:Diacylglycerol Acyltransferase in Oleaginous Streptomyces sp. Strain G25

PubMed Central

Röttig, Annika; Strittmatter, Carl Simon; Schauer, Jennifer; Hiessl, Sebastian; Daniel, Rolf

2016-01-01

ABSTRACT Recently, we isolated a novel Streptomyces strain which can accumulate extraordinarily large amounts of triacylglycerol (TAG) and consists of 64% fatty acids (dry weight) when cultivated with glucose and 50% fatty acids (dry weight) when cultivated with cellobiose. To identify putative gene products responsible for lipid storage and cellobiose utilization, we analyzed its draft genome sequence. A single gene encoding a wax ester synthase/acyl coenzyme A (CoA):diacylglycerol acyltransferase (WS/DGAT) was identified and heterologously expressed in Escherichia coli. The purified enzyme AtfG25 showed acyltransferase activity with C12- or C16-acyl-CoA, C12 to C18 alcohols, or dipalmitoyl glycerol. This acyltransferase exhibits 24% amino acid identity to the model enzyme AtfA from Acinetobacter baylyi but has high sequence similarities to WS/DGATs from other Streptomyces species. To investigate the impact of AtfG25 on lipid accumulation, the respective gene, atfG25, was inactivated in Streptomyces sp. strain G25. However, cells of the insertion mutant still exhibited DGAT activity and were able to store TAG, albeit in lower quantities and at lower rates than the wild-type strain. These findings clearly indicate that AtfG25 has an important, but not exclusive, role in TAG biosynthesis in the novel Streptomyces isolate and suggest the presence of alternative metabolic pathways for lipid accumulation which are discussed in the present study. IMPORTANCE A novel Streptomyces strain was isolated from desert soil, which represents an extreme environment with high temperatures, frequent drought, and nutrient scarcity. We believe that these harsh conditions promoted the development of the capacity for this strain to accumulate extraordinarily large amounts of lipids. In this study, we present the analysis of its draft genome sequence with a special focus on enzymes potentially involved in its lipid storage. Furthermore, the activity and importance of the detected acyltransferase were studied. As discussed in this paper, and in contrast to many other bacteria, streptomycetes seem to possess a complex metabolic network to synthesize lipids, whereof crucial steps are still largely unknown. This paper therefore provides insights into a range of topics, including extremophile bacteria, the physiology of lipid accumulation, and the biotechnological production of bacterial lipids. PMID:27474711

Anomalous bioaccumulation of lead in the earthworm Eisenoides lonnbergi (Michaelsen)

USGS Publications Warehouse

Beyer, W. Nelson; Codling, Eton E.; Rutzke, Michael A.

2018-01-01

Lead concentrations in soil organisms are usually well below those in the associated soil and tend to decrease with each higher trophic level in a food chain. Earthworms of the species Eisenoides lonnbergi provide an exception to this observation, accumulating very high concentrations of lead from acidic soils. Earthworms belonging to this species were collected from strongly to extremely acidic soils at 16 sites on a wildlife refuge in Maryland, USA. A lead concentration as high as 766 mg/kg, dry weight, was detected in depurated E. lonnbergi collected from soil containing only 17 mg/kg of lead. Concentration factors (ratio of lead concentration in earthworms to lead concentration in soil, dry wt) were highly variable at the sites, from 1.0 to 83. As suggested previously, lead absorption by earthworms is enhanced in low-calcium soils. The anomalously high concentrations of lead found in E. lonnbergi are more closely correlated with the uptake of calcium from acidic soils than with bioaccessibility of soil lead. 

Adaptive failure to high-fat diet characterizes steatohepatitis in Alms1 mutant mice.

PubMed

Arsov, Todor; Larter, Claire Z; Nolan, Christopher J; Petrovsky, Nikolai; Goodnow, Christopher C; Teoh, Narcissus C; Yeh, Matthew M; Farrell, Geoffrey C

2006-04-21

The biochemical differences between simple steatosis, a benign liver disease, and non-alcoholic steatohepatitis, which leads to cirrhosis, are unclear. Fat aussie is an obese mouse strain with a truncating mutation (foz) in the Alms1 gene. Chow-fed female foz/foz mice develop obesity, diabetes, and simple steatosis. We fed foz/foz and wildtype mice a high-fat diet. Foz/foz mice developed serum ALT elevation and severe steatohepatitis with hepatocyte ballooning, inflammation, and fibrosis; wildtype mice showed simple steatosis. Biochemical pathways favoring hepatocellular lipid accumulation (fatty acid uptake; lipogenesis) and lipid disposal (fatty acid beta-oxidation; triglyceride egress) were both induced by high-fat feeding in wildtype but not foz/foz mice. The resulting extremely high hepatic triglyceride levels were associated with induction of mitochondrial uncoupling protein-2 and adipocyte-specific fatty acid binding protein-2, but not cytochrome P4502e1 or lipid peroxidation. In this model of metabolic syndrome, transition of steatosis to steatohepatitis was associated with hypoadiponectinemia, a mediator of hepatic fatty acid disposal pathways.

[Multi-temporal scale analysis of impacts of extreme high temperature on net carbon uptake in subtropical coniferous plantation.

PubMed

Zhang, Mi; Wen, Xue Fa; Zhang, Lei Ming; Wang, Hui Min; Guo, Yi Wen; Yu, Gui Rui

2018-02-01

Extreme high temperature is one of important extreme weathers that impact forest ecosystem carbon cycle. In this study, applying CO 2 flux and routine meteorological data measured during 2003-2012, we examined the impacts of extreme high temperature and extreme high temperature event on net carbon uptake of subtropical coniferous plantation in Qianyanzhou. Combining with wavelet analysis, we analyzed environmental controls on net carbon uptake at different temporal scales, when the extreme high temperature and extreme high temperature event happened. The results showed that mean daily cumulative NEE decreased by 51% in the days with daily maximum air temperature range between 35 ℃ and 40 ℃, compared with that in the days with the range between 30 ℃ and 34 ℃. The effects of the extreme high temperature and extreme high temperature event on monthly NEE and annual NEE related to the strength and duration of extreme high tempe-rature event. In 2003, when strong extreme high temperature event happened, the sum of monthly cumulative NEE in July and August was only -11.64 g C·m -2 ·(2 month) -1 . The value decreased by 90%, compared with multi-year average value. At the same time, the relative variation of annual NEE reached -6.7%. In July and August, when the extreme high temperature and extreme high temperature event occurred, air temperature (T a ) and vapor press deficit (VPD) were the dominant controller for the daily variation of NEE. The coherency between NEE T a and NEE VPD was 0.97 and 0.95, respectively. At 8-, 16-, and 32-day periods, T a , VPD, soil water content at 5 cm depth (SWC), and precipitation (P) controlled NEE. The coherency between NEE SWC and NEE P was higher than 0.8 at monthly scale. The results indicated that atmospheric water deficit impacted NEE at short temporal scale, when the extreme high temperature and extreme high temperature event occurred, both of atmospheric water deficit and soil drought stress impacted NEE at long temporal scales in this ecosystem.

The Persimmon 9-lipoxygenase Gene DkLOX3 Plays Positive Roles in Both Promoting Senescence and Enhancing Tolerance to Abiotic Stress

PubMed Central

Hou, Yali; Meng, Kun; Han, Ye; Ban, Qiuyan; Wang, Biao; Suo, Jiangtao; Lv, Jingyi; Rao, Jingping

2015-01-01

The lipoxygenase (LOX) pathway is a key regulator for lipid peroxidation, which is crucial for plant senescence and defense pathways. In this study, the transcriptional expression patterns of three persimmon (Diospyros kaki L. ‘Fupingjianshi’) 9-lipoxygenase genes (DkLOX1, DkLOX3, and DkLOX4) were investigated. DkLOX1 was specifically expressed in fruit, particularly in young fruit, and showed little response to the postharvest environments. DkLOX4 was expressed in all tissues and slightly stimulated by mechanical damage and low temperature. DkLOX3 was expressed mainly in mature fruit, and the expression was extremely high throughout the storage period, apparently up-regulated by mechanical damage and high carbon dioxide treatments. Further functional analysis showed that overexpression of DkLOX3 in tomato (Solanum lycopersicum cv. Micro-Tom) accelerated fruit ripening and softening. This was accompanied by higher malondialdehyde (MDA) content and lycopene accumulation, advanced ethylene release peak and elevated expression of ethylene synthesis genes, including ACS2, ACO1, and ACO3. In addition, DkLOX3 overexpression promoted dark induced transgenic Arabidopsis leaf senescence with more chlorophyll loss, increased electrolyte leakage and MDA content. Furthermore, the functions of DkLOX3 in response to abiotic stresses, including osmotic stress, high salinity and drought were investigated. Arabidopsis DkLOX3 overexpression (DkLOX3-OX) transgenic lines were found to be more tolerant to osmotic stress with higher germination rate and root growth than wild-type. Moreover, DkLOX3-OX Arabidopsis plants also exhibited enhanced resistance to high salinity and drought, with similar decreased O2- and H2O2 accumulation and upregulation of stress-responsive genes expression, including RD22, RD29A, RD29B, and NCED3, except for FRY1, which plays a negative role in stress response. Overall, these results suggested that DkLOX3 plays positive roles both in promoting ripening and senescence through lipid peroxidation and accelerated ethylene production and in stress response via regulating reactive oxygen species accumulation and stress responsive genes expression. PMID:26697033

Evaluating Precipitation Elevation Gradients in the Alaska Range using Ice Core and Alpine Weather Station Records

NASA Astrophysics Data System (ADS)

McConnell, E.; Osterberg, E. C.; Winski, D.; Kreutz, K. J.; Wake, C. P.; Campbell, S. W.; Ferris, D. G.; Birkel, S. D.

2016-12-01

Precipitation in Alaska is sensitive to the Aleutian Low (ALow) pressure system and North Pacific sea-surface temperatures, as shown by the increase in Alaskan sub-Arctic precipitation associated with the 1976 shift to the positive phase of the Pacific Decadal Oscillation (PDO). Precipitation in the high-elevation accumulation zones of Alaskan alpine glaciers provides critical mass input for glacial mass balance, which has been declining in recent decades from warmer summer temperatures despite the winter precipitation increase. Twin >1500-year ice cores collected from the summit plateau of Mount Hunter in Denali National Park, Alaska show a remarkable doubling of annual snow accumulation over the past 150 years, with most of the change observed in the winter. Other alpine ice cores collected from the Alaska and Saint Elias ranges show similar snowfall increases over recent decades. However, although Alaskan weather stations at low elevation recorded a 7-38% increase in winter precipitation across the 1976 PDO transition, this increase is not as substantial as that recorded in the Mt. Hunter ice core. Weather stations at high-elevation alpine sites are comparatively rare, and reasons for the enhanced precipitation trends at high elevation in Alaska remain unclear. Here we use Automatic Weather Station data from the Mt. Hunter drill site (3,900 m a.s.l) and from nearby Denali climber's Base Camp (2,195 m a.s.l.) to evaluate the relationships between alpine and lowland Alaskan precipitation on annual, seasonal, and storm-event temporal scales from 2008-2016. Both stations are located on snow and have sonic snow depth sounders to record daily precipitation. We focus on the role of variable ALow and North Pacific High strength in influencing Alaskan precipitation elevational gradients, particularly in association with the extreme 2015-2016 El Niño event, the 2009-2010 moderate El Niño event, and the 2010-2011 moderate La Niña event. Our analysis will improve our paleoclimate interpretations of the 1200-year Mt. Hunter accumulation record, and improve our ability to integrate low-elevation hydroclimate proxies from lake sediment cores.

Calcium Deficiency Triggers Phloem Remobilization of Cadmium in a Hyperaccumulating Species1

PubMed Central

Tian, Shengke; Xie, Ruohan; Wang, Haixin; Hu, Yan; Ge, Jun; Liao, Xingcheng; Gao, Xiaoyu; Brown, Patrick; Lin, Xianyong; Lu, Lingli

2016-01-01

Understanding cadmium (Cd) accumulation in plants is critical for the development of plant-based strategies for soil remediation and crop safety. Sedum alfredii is a nonbrassica plant species known to hyperaccumulate Cd. The characteristics of Cd uptake, distribution, and retranslocation affected by the Ca status were investigated at cellular levels in S. alfredii. Low Ca supply significantly increased Cd contents in shoots of S. alfredii, particularly in the young leaves. Micro x-ray fluorescence images confirmed that sequestration of Cd was greatly enhanced in the young leaves under Ca deficiency stress, with a significant amount of Cd localized in mesophyll cells, compared to the young leaves supplied with high Ca levels. Cd influx into protoplasts isolated from young leaves was significantly inhibited by the addition of Ca channel inhibitors, but not by pre-exposure to Ca deficiency. In stems, the Cd signal in vascular systems under low Ca levels was 10-fold higher than in those treated with higher Ca levels. A detailed investigation of vascular bundles revealed that an extremely high Cd signal induced by low Ca supply occurred in the phloem tissues, but not in the xylem tissues. Transfer of Cd pretreated plants to nutrient solutions at different Ca levels confirmed that a much higher amount of Cd was reallocated to the new growth tissues under low Ca stress compared to plants supplied with sufficient Ca. These results suggest that Ca deficiency triggered a highly efficient phloem remobilization of Cd in S. alfredii and subsequently enhanced Cd accumulation in its young leaves. PMID:27789737

Huperzine alkaloids from Australasian and southeast Asian Huperzia.

PubMed

Lim, Wei-Han; Goodger, Jason Q D; Field, Ashley R; Holtum, Joseph A M; Woodrow, Ian E

2010-09-01

The pharmaceutical alkaloid huperzine A (HupA), currently used in herbal supplements and medicines worldwide, is predominantly sourced from the Chinese lycopod Huperzia serrata (Thunb. ex Murray) Trev. (Lycopodiaceae), which on average contains only 0.08 mg HupA g(-1) dry weight, and is experiencing a rapid decline in China due to over-harvesting. To find a high-yielding, natural source of HupA and/or the related huperzine B (HupB) that could potentially be used as the starting material in a commercial propagation program. We surveyed 17 Huperzia species (15 indigenous to Australia and southeast Asia) for their foliar HupA and HupB concentrations. We also studied intra-specific variation for the huperzines in four species that were available in sufficient numbers, and determined tissue-specific accumulation in larger specimens. HupA was detected in 11 Australasian and southeast Asian species, with eight also containing HupB, albeit at much lower concentrations. A H. elmeri (Herter) Holub plant from the Philippines had one of the highest HupA concentrations recorded (1.01 mg g(-1) dry wt) and it also had the highest HupB content of all plants surveyed (0.34 mg g(-1) dry wt). Intra-specific HupA and HupB concentrations were extremely variable, and at the intra-plant level, reproductive strobili were found to accumulate the highest HupA concentrations. Select Huperzia species from Australia and southeast Asia have potential as the starting material for establishing commercial HupA plantations, but the high intra-specific variability observed suggests that detailed screening is needed to isolate high huperzine-yielding individuals.

Forest fuel reduction alters fire severity and long-term carbon storage in three Pacific Northwest ecosystems

Treesearch

Stephen R. Mitchell; Mark E. Harmon; Kari E.B. O' Connell

2009-01-01

Two forest management objectives being debated in the context of federally managed landscapes in the U.S. Pacific Northwest involve a perceived trade-off between fire restoration and carbon sequestration. The former strategy would reduce fuel (and therefore carbon [C]) that has accumulated through a century of fire suppression and exclusion which has led to extreme...

Identification of a hydrolyzable tannin, oenothein B, as an aluminum-detoxifying ligand in a highly aluminum-resistant tree, Eucalyptus camaldulensis.

PubMed

Tahara, Ko; Hashida, Koh; Otsuka, Yuichiro; Ohara, Seiji; Kojima, Katsumi; Shinohara, Kenji

2014-02-01

Eucalyptus camaldulensis is a tree species in the Myrtaceae that exhibits extremely high resistance to aluminum (Al). To explore a novel mechanism of Al resistance in plants, we examined the Al-binding ligands in roots and their role in Al resistance of E. camaldulensis. We identified a novel type of Al-binding ligand, oenothein B, which is a dimeric hydrolyzable tannin with many adjacent phenolic hydroxyl groups. Oenothein B was isolated from root extracts of E. camaldulensis by reverse-phase high-performance liquid chromatography and identified by nuclear magnetic resonance and mass spectrometry analyses. Oenothein B formed water-soluble or -insoluble complexes with Al depending on the ratio of oenothein B to Al and could bind at least four Al ions per molecule. In a bioassay using Arabidopsis (Arabidopsis thaliana), Al-induced inhibition of root elongation was completely alleviated by treatment with exogenous oenothein B, which indicated the capability of oenothein B to detoxify Al. In roots of E. camaldulensis, Al exposure enhanced the accumulation of oenothein B, especially in EDTA-extractable forms, which likely formed complexes with Al. Oenothein B was localized mostly in the root symplast, in which a considerable amount of Al accumulated. In contrast, oenothein B was not detected in three Al-sensitive species, comprising the Myrtaceae tree Melaleuca bracteata, Populus nigra, and Arabidopsis. Oenothein B content in roots of five tree species was correlated with their Al resistance. Taken together, these results suggest that internal detoxification of Al by the formation of complexes with oenothein B in roots likely contributes to the high Al resistance of E. camaldulensis.

Identification of a Hydrolyzable Tannin, Oenothein B, as an Aluminum-Detoxifying Ligand in a Highly Aluminum-Resistant Tree, Eucalyptus camaldulensis1[C][W

PubMed Central

Tahara, Ko; Hashida, Koh; Otsuka, Yuichiro; Ohara, Seiji; Kojima, Katsumi; Shinohara, Kenji

2014-01-01

Eucalyptus camaldulensis is a tree species in the Myrtaceae that exhibits extremely high resistance to aluminum (Al). To explore a novel mechanism of Al resistance in plants, we examined the Al-binding ligands in roots and their role in Al resistance of E. camaldulensis. We identified a novel type of Al-binding ligand, oenothein B, which is a dimeric hydrolyzable tannin with many adjacent phenolic hydroxyl groups. Oenothein B was isolated from root extracts of E. camaldulensis by reverse-phase high-performance liquid chromatography and identified by nuclear magnetic resonance and mass spectrometry analyses. Oenothein B formed water-soluble or -insoluble complexes with Al depending on the ratio of oenothein B to Al and could bind at least four Al ions per molecule. In a bioassay using Arabidopsis (Arabidopsis thaliana), Al-induced inhibition of root elongation was completely alleviated by treatment with exogenous oenothein B, which indicated the capability of oenothein B to detoxify Al. In roots of E. camaldulensis, Al exposure enhanced the accumulation of oenothein B, especially in EDTA-extractable forms, which likely formed complexes with Al. Oenothein B was localized mostly in the root symplast, in which a considerable amount of Al accumulated. In contrast, oenothein B was not detected in three Al-sensitive species, comprising the Myrtaceae tree Melaleuca bracteata, Populus nigra, and Arabidopsis. Oenothein B content in roots of five tree species was correlated with their Al resistance. Taken together, these results suggest that internal detoxification of Al by the formation of complexes with oenothein B in roots likely contributes to the high Al resistance of E. camaldulensis. PMID:24381064

Tropical river suspended sediment and solute dynamics in storms during an extreme drought

NASA Astrophysics Data System (ADS)

Clark, Kathryn E.; Shanley, James B.; Scholl, Martha A.; Perdrial, Nicolas; Perdrial, Julia N.; Plante, Alain F.; McDowell, William H.

2017-05-01

Droughts, which can strongly affect both hydrologic and biogeochemical systems, are projected to become more prevalent in the tropics in the future. We assessed the effects of an extreme drought during 2015 on stream water composition in the Luquillo Mountains of Puerto Rico. We demonstrated that drought base flow in the months leading up to the study was sourced from trade-wind orographic rainfall, suggesting a resistance to the effects of an otherwise extreme drought. In two catchments (Mameyes and Icacos), we sampled a series of four rewetting events that partially alleviated the drought. We collected and analyzed dissolved constituents (major cations and anions, organic carbon, and nitrogen) and suspended sediment (inorganic and organic matter (particulate organic carbon and particulate nitrogen)). The rivers appeared to be resistant to extreme drought, recovering quickly upon rewetting, as (1) the concentration-discharge (C-Q) relationships deviated little from the long-term patterns; (2) "new water" dominated streamflow during the latter events; (3) suspended sediment sources had accumulated in the channel during the drought flushed out during the initial events; and (4) the severity of the drought, as measured by the US drought monitor, was reduced dramatically after the rewetting events. Through this interdisciplinary study, we were able to investigate the impact of extreme drought through rewetting events on the river biogeochemistry.

Assessing the ability of operational snow models to predict snowmelt runoff extremes (Invited)

NASA Astrophysics Data System (ADS)

Wood, A. W.; Restrepo, P. J.; Clark, M. P.

2013-12-01

In the western US, the snow accumulation and melt cycle of winter and spring plays a critical role in the region's water management strategies. Consequently, the ability to predict snowmelt runoff at time scales from days to seasons is a key input for decisions in reservoir management, whether for avoiding flood hazards or supporting environmental flows through the scheduling of releases in spring, or for allocating releases for multi-state water distribution in dry seasons of year (using reservoir systems to provide an invaluable buffer for many sectors against drought). Runoff forecasts thus have important benefits at both wet and dry extremes of the climatological spectrum. The importance of the prediction of the snow cycle motivates an assessment of the strengths and weaknesses of the US's central operational snow model, SNOW17, in contrast to process-modeling alternatives, as they relate to simulating observed snowmelt variability and extremes. To this end, we use a flexible modeling approach that enables an investigation of different choices in model structure, including model physics, parameterization and degree of spatiotemporal discretization. We draw from examples of recent extreme events in western US watersheds and an overall assessment of retrospective model performance to identify fruitful avenues for advancing the modeling basis for the operational prediction of snow-related runoff extremes.

Liquid-infused nanostructured surfaces with extreme anti-ice and anti-frost performance.

PubMed

Kim, Philseok; Wong, Tak-Sing; Alvarenga, Jack; Kreder, Michael J; Adorno-Martinez, Wilmer E; Aizenberg, Joanna

2012-08-28

Ice-repellent coatings can have significant impact on global energy savings and improving safety in many infrastructures, transportation, and cooling systems. Recent efforts for developing ice-phobic surfaces have been mostly devoted to utilizing lotus-leaf-inspired superhydrophobic surfaces, yet these surfaces fail in high-humidity conditions due to water condensation and frost formation and even lead to increased ice adhesion due to a large surface area. We report a radically different type of ice-repellent material based on slippery, liquid-infused porous surfaces (SLIPS), where a stable, ultrasmooth, low-hysteresis lubricant overlayer is maintained by infusing a water-immiscible liquid into a nanostructured surface chemically functionalized to have a high affinity to the infiltrated liquid and lock it in place. We develop a direct fabrication method of SLIPS on industrially relevant metals, particularly aluminum, one of the most widely used lightweight structural materials. We demonstrate that SLIPS-coated Al surfaces not only suppress ice/frost accretion by effectively removing condensed moisture but also exhibit at least an order of magnitude lower ice adhesion than state-of-the-art materials. On the basis of a theoretical analysis followed by extensive icing/deicing experiments, we discuss special advantages of SLIPS as ice-repellent surfaces: highly reduced sliding droplet sizes resulting from the extremely low contact angle hysteresis. We show that our surfaces remain essentially frost-free in which any conventional materials accumulate ice. These results indicate that SLIPS is a promising candidate for developing robust anti-icing materials for broad applications, such as refrigeration, aviation, roofs, wires, outdoor signs, railings, and wind turbines.

A large set of potential past, present and future hydro-meteorological time series for the UK

NASA Astrophysics Data System (ADS)

Guillod, Benoit P.; Jones, Richard G.; Dadson, Simon J.; Coxon, Gemma; Bussi, Gianbattista; Freer, James; Kay, Alison L.; Massey, Neil R.; Sparrow, Sarah N.; Wallom, David C. H.; Allen, Myles R.; Hall, Jim W.

2018-01-01

Hydro-meteorological extremes such as drought and heavy precipitation can have large impacts on society and the economy. With potentially increasing risks associated with such events due to climate change, properly assessing the associated impacts and uncertainties is critical for adequate adaptation. However, the application of risk-based approaches often requires large sets of extreme events, which are not commonly available. Here, we present such a large set of hydro-meteorological time series for recent past and future conditions for the United Kingdom based on weather@home 2, a modelling framework consisting of a global climate model (GCM) driven by observed or projected sea surface temperature (SST) and sea ice which is downscaled to 25 km over the European domain by a regional climate model (RCM). Sets of 100 time series are generated for each of (i) a historical baseline (1900-2006), (ii) five near-future scenarios (2020-2049) and (iii) five far-future scenarios (2070-2099). The five scenarios in each future time slice all follow the Representative Concentration Pathway 8.5 (RCP8.5) and sample the range of sea surface temperature and sea ice changes from CMIP5 (Coupled Model Intercomparison Project Phase 5) models. Validation of the historical baseline highlights good performance for temperature and potential evaporation, but substantial seasonal biases in mean precipitation, which are corrected using a linear approach. For extremes in low precipitation over a long accumulation period ( > 3 months) and shorter-duration high precipitation (1-30 days), the time series generally represents past statistics well. Future projections show small precipitation increases in winter but large decreases in summer on average, leading to an overall drying, consistently with the most recent UK Climate Projections (UKCP09) but larger in magnitude than the latter. Both drought and high-precipitation events are projected to increase in frequency and intensity in most regions, highlighting the need for appropriate adaptation measures. Overall, the presented dataset is a useful tool for assessing the risk associated with drought and more generally with hydro-meteorological extremes in the UK.

Overexpression of HO-1 assisted PM2.5-induced apoptosis failure and autophagy-related cell necrosis.

PubMed

Zhou, Wei; Yuan, Xiaoyan; Zhang, Li; Su, Baoting; Tian, Dongdong; Li, Yang; Zhao, Jun; Wang, Yimei; Peng, Shuangqing

2017-11-01

Severe smog/haze events accompanied by extremely high concentrations of airborne fine particulate matter (PM2.5) have emerged frequently in China and the potential health risks have attracted ever-growing attention. During these episodes, a surge in hospital visits for acute respiratory symptoms and respiratory diseases exacerbation has been reported to be associated with acute exposure to high-levels of particulate matters. To investigate cell fate determination and the underlying pathogenic mechanisms during severe haze episodes or smog events, we exposed human lung epithelial cells (BEAS-2B) to PM2.5 (0-400μg/mL) for 24h and found that high doses of PM2.5 caused cell necrosis and autophagy dysfunction, while co-treatment with the autophagy inhibitor 3-MA could partially reduce PM2.5-induced cell necrosis. Exposure to PM2.5 also increased the expression and mitochondrial transposition of heme oxygenase 1 (HO-1), which consequently reduced the release of cytochrome C from mitochondria to cytosol. Knockdown of HO-1 by siRNA attenuated the mitochondrial accumulation of HO-1, reversed HO-1-induced the reduction of cytochrome C release and promoted PM2.5-induced cell apoptosis. In contrast to necrosis, PM2.5-induced autophagy was independent of HO-1. In conclusion, our results demonstrate that acute exposure to high PM2.5 concentrations causes autophagy-related cell necrosis. The decrease in cytochrome C release and apoptosis by upregulation of HO-1 maybe assist PM2.5-induced autophagy-related cell necrosis. Further, this study reveals dual roles for HO-1 in PM2.5-induced cytotoxicity and presents a possible explanation for the onset of acute respiratory symptoms under extreme particulate air pollution. Copyright © 2017. Published by Elsevier Inc.

Exploring Antarctic Land Surface Temperature Extremes Using Condensed Anomaly Databases

NASA Astrophysics Data System (ADS)

Grant, Glenn Edwin

Satellite observations have revolutionized the Earth Sciences and climate studies. However, data and imagery continue to accumulate at an accelerating rate, and efficient tools for data discovery, analysis, and quality checking lag behind. In particular, studies of long-term, continental-scale processes at high spatiotemporal resolutions are especially problematic. The traditional technique of downloading an entire dataset and using customized analysis code is often impractical or consumes too many resources. The Condensate Database Project was envisioned as an alternative method for data exploration and quality checking. The project's premise was that much of the data in any satellite dataset is unneeded and can be eliminated, compacting massive datasets into more manageable sizes. Dataset sizes are further reduced by retaining only anomalous data of high interest. Hosting the resulting "condensed" datasets in high-speed databases enables immediate availability for queries and exploration. Proof of the project's success relied on demonstrating that the anomaly database methods can enhance and accelerate scientific investigations. The hypothesis of this dissertation is that the condensed datasets are effective tools for exploring many scientific questions, spurring further investigations and revealing important information that might otherwise remain undetected. This dissertation uses condensed databases containing 17 years of Antarctic land surface temperature anomalies as its primary data. The study demonstrates the utility of the condensate database methods by discovering new information. In particular, the process revealed critical quality problems in the source satellite data. The results are used as the starting point for four case studies, investigating Antarctic temperature extremes, cloud detection errors, and the teleconnections between Antarctic temperature anomalies and climate indices. The results confirm the hypothesis that the condensate databases are a highly useful tool for Earth Science analyses. Moreover, the quality checking capabilities provide an important method for independent evaluation of dataset veracity.

Latest results on νμ → ντ oscillations from the OPERA experiment

NASA Astrophysics Data System (ADS)

Komatsu, Masahiro; OPERA Collaboration

2016-04-01

The OPERA experiment is designed to prove neutrino oscillations in the νμ to ντ channel through the direct observation of the tau lepton in tau neutrino charged current interactions. The experiment has accumulated data for five years, from 2008 to 2012, with the CERN Neutrinos to Gran Sasso (CNGS), an almost pure νμ beam. In the last two years, a very large amount of the data accumulated in the nuclear emulsions has been analyzed. The latest results on oscillations with the increased statistics, which include a fourth tau neutrino candidate event, will be presented. Given the extremely low expected background, this result corresponds to the observation of the oscillation process with a four sigma level significance.

Extracellular chelation of zinc does not affect hippocampal excitability and seizure-induced cell death in rats

PubMed Central

Lavoie, Nathalie; Peralta, Modesto R; Chiasson, Marilou; Lafortune, Kathleen; Pellegrini, Luca; Seress, László; Tóth, Katalin

2007-01-01

In the nervous system, zinc can influence synaptic responses and at extreme concentrations contributes to epileptic and ischaemic neuronal injury. Zinc can originate from synaptic vesicles, the extracellular space and from intracellular stores. In this study, we aimed to determine which of these zinc pools is responsible for the increased hippocampal excitability observed in zinc-depleted animals or following zinc chelation. Also, we investigated the source of intracellularly accumulating zinc in vulnerable neurons. Our data show that membrane-permeable and membrane-impermeable zinc chelators had little or no effect on seizure activity in the CA3 region. Furthermore, extracellular zinc chelation could not prevent the accumulation of lethal concentrations of zinc in dying neurons following epileptic seizures. At the electron microscopic level, zinc staining significantly increased at the presynaptic membrane of mossy fibre terminals in kainic acid-treated animals. These data indicate that intracellular but not extracellular zinc chelators could influence neuronal excitability and seizure-induced zinc accumulation observed in the cytosol of vulnerable neurons. PMID:17095563

Plasma q -plate for generation and manipulation of intense optical vortices

DOE PAGES

Qu, Kenan; Jia, Qing; Fisch, Nathaniel J.

2017-11-28

An optical vortex is a light wave with a twisting wavefront around its propagation axis and null intensity in the beam center. Its unique spatial structure of field lends itself to a broad range of applications, including optical communication, quantum information, superresolution microscopy, and multidimensional manipulation of particles. However, accessible intensity of optical vortices have been limited to material ionization threshold. This limitation might be removed by using the plasma medium. Here in this paper, we propose the design of suitably magnetized plasmas which, functioning as a q-plate, leads to a direct conversion from a high-intensity Gaussian beam into amore » twisted beam. A circularly polarized laser beam in the plasma accumulates an azimuthal-angle-dependent phase shift and hence forms a twisting wavefront. Our three-dimensional particle-in-cell simulations demonstrate extremely high-power conversion efficiency. The plasma q-plate can work in a large range of frequencies spanning from terahertz to the optical domain.« less

Biomonitoring of trace metal bioavailabilities to the barnacle Amphibalanus amphitrite along the Iranian coast of the Persian Gulf.

PubMed

Nasrolahi, A; Smith, B D; Ehsanpour, M; Afkhami, M; Rainbow, P S

2014-10-01

The fouling barnacle Amphibalanus amphitrite is a cosmopolitan biomonitor of trace metal bioavailabilities, with an international comparative data set of body metal concentrations. Bioavailabilities of As, Cd, Cr, Cu, Fe, Mn, Pb, V and Zn to A. amphitrite were investigated at 19 sites along the Iranian coast of the understudied Persian Gulf. Commercial and fishing ports showed extremely high Cu bioavailabilities, associated with high Zn bioavailabilities, possibly from antifouling paints and procedures. V availability was raised at one port, perhaps associated with fuel leakage. Cd bioavailabilities were raised at sites near the Strait of Hormuz, perhaps affected by adjacent upwelling off Oman. The As data allow a reinterpretation of the typical range of accumulated As concentrations in A. amphitrite. The Persian Gulf data add a new region to the A. amphitrite database, confirming its importance in assessing the ecotoxicologically significant trace metal contamination of coastal waters across the world. Copyright © 2014 Elsevier Ltd. All rights reserved.

Causality of an extreme harmful algal bloom in Monterey Bay, California, during the 2014-2016 northeast Pacific warm anomaly

NASA Astrophysics Data System (ADS)

Ryan, J. P.; Kudela, R. M.; Birch, J. M.; Blum, M.; Bowers, H. A.; Chavez, F. P.; Doucette, G. J.; Hayashi, K.; Marin, R.; Mikulski, C. M.; Pennington, J. T.; Scholin, C. A.; Smith, G. J.; Woods, A.; Zhang, Y.

2017-06-01

An ecologically and economically disruptive harmful algal bloom (HAB) affected much of the northeast Pacific margin in 2015, during a prolonged oceanic warm anomaly. Caused by diatoms of the genus Pseudo-nitzschia, this HAB produced the highest particulate concentrations of the biotoxin domoic acid (DA) ever recorded in Monterey Bay, California. Bloom inception followed strong upwelling during the spring transition, which introduced nutrients and eliminated the warm anomaly locally. Subsequently, moderate and intermittent upwelling created favorable conditions for growth and accumulation of HAB biomass, which was dominated by a highly toxigenic species, P. australis. High cellular DA concentrations were associated with available nitrogen for DA synthesis coincident with silicate exhaustion. This nutrient influence resulted from two factors: (1) disproportionate depletion of silicate in upwelling source waters during the warm anomaly, the most severe depletion observed in 24 years, and (2) silicate uptake by the dense diatom bloom.

Plasma q -plate for generation and manipulation of intense optical vortices

DOE Office of Scientific and Technical Information (OSTI.GOV)

Qu, Kenan; Jia, Qing; Fisch, Nathaniel J.

An optical vortex is a light wave with a twisting wavefront around its propagation axis and null intensity in the beam center. Its unique spatial structure of field lends itself to a broad range of applications, including optical communication, quantum information, superresolution microscopy, and multidimensional manipulation of particles. However, accessible intensity of optical vortices have been limited to material ionization threshold. This limitation might be removed by using the plasma medium. Here in this paper, we propose the design of suitably magnetized plasmas which, functioning as a q-plate, leads to a direct conversion from a high-intensity Gaussian beam into amore » twisted beam. A circularly polarized laser beam in the plasma accumulates an azimuthal-angle-dependent phase shift and hence forms a twisting wavefront. Our three-dimensional particle-in-cell simulations demonstrate extremely high-power conversion efficiency. The plasma q-plate can work in a large range of frequencies spanning from terahertz to the optical domain.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rott, Carsten; In, Seongjin; Kumar, Jason

Dark matter can be gravitationally captured by the Sun after scattering off solar nuclei. Annihilations of the dark matter trapped and accumulated in the centre of the Sun could result in one of the most detectable and recognizable signals for dark matter. Searches for high-energy neutrinos produced in the decay of annihilation products have yielded extremely competitive constraints on the spin-dependent scattering cross sections of dark matter with nuclei. Recently, the low energy neutrino signal arising from dark-matter annihilation to quarks which then hadronize and shower has been suggested as a competitive and complementary search strategy. These high-multiplicity hadronic showersmore » give rise to a large amount of pions which will come to rest in the Sun and decay, leading to a unique sub-GeV neutrino signal. We here improve on previous works by considering the monoenergetic neutrino signal arising from both pion and kaon decay. We consider searches at liquid scintillation, liquid argon, and water Cherenkov detectors and find very competitive sensitivities for few-GeV dark matter masses.« less

SEEDS — Strategic explorations of exoplanets and disks with the Subaru Telescope —

PubMed Central

TAMURA, Motohide

2016-01-01

The first convincing detection of planets orbiting stars other than the Sun, or exoplanets, was made in 1995. In only 20 years, the number of the exoplanets including promising candidates has already accumulated to more than 5000. Most of the exoplanets discovered so far are detected by indirect methods because the direct imaging of exoplanets needs to overcome the extreme contrast between the bright central star and the faint planets. Using the large Subaru 8.2-m Telescope, a new high-contrast imager, HiCIAO, and second-generation adaptive optics (AO188), the most ambitious high-contrast direct imaging survey to date for giant planets and planet-forming disks has been conducted, the SEEDS project. In this review, we describe the aims and results of the SEEDS project for exoplanet/disk science. The completeness and uniformity of this systematic survey mean that the resulting data set will dominate this field of research for many years. PMID:26860453

High Mitochondrial DNA Stability in B-Cell Chronic Lymphocytic Leukemia

PubMed Central

Cerezo, María; Bandelt, Hans-Jürgen; Martín-Guerrero, Idoia; Ardanaz, Maite; Vega, Ana; Carracedo, Ángel; García-Orad, África; Salas, Antonio

2009-01-01

Background Chronic Lymphocytic Leukemia (CLL) leads to progressive accumulation of lymphocytes in the blood, bone marrow, and lymphatic tissues. Previous findings have suggested that the mtDNA could play an important role in CLL. Methodology/Principal Findings The mitochondrial DNA (mtDNA) control-region was analyzed in lymphocyte cell DNA extracts and compared with their granulocyte counterpart extract of 146 patients suffering from B-Cell CLL; B-CLL (all recruited from the Basque country). Major efforts were undertaken to rule out methodological artefacts that would render a high false positive rate for mtDNA instabilities and thus lead to erroneous interpretation of sequence instabilities. Only twenty instabilities were finally confirmed, most of them affecting the homopolymeric stretch located in the second hypervariable segment (HVS-II) around position 310, which is well known to constitute an extreme mutational hotspot of length polymorphism, as these mutations are frequently observed in the general human population. A critical revision of the findings in previous studies indicates a lack of proper methodological standards, which eventually led to an overinterpretation of the role of the mtDNA in CLL tumorigenesis. Conclusions/Significance Our results suggest that mtDNA instability is not the primary causal factor in B-CLL. A secondary role of mtDNA mutations cannot be fully ruled out under the hypothesis that the progressive accumulation of mtDNA instabilities could finally contribute to the tumoral process. Recommendations are given that would help to minimize erroneous interpretation of sequencing results in mtDNA studies in tumorigenesis. PMID:19924307

3D cine magnetic resonance imaging of rat lung ARDS using gradient-modulated SWIFT with retrospective respiratory gating

NASA Astrophysics Data System (ADS)

Kobayashi, Naoharu; Lei, Jianxun; Utecht, Lynn; Garwood, Michael; Ingbar, David H.; Bhargava, Maneesh

2015-03-01

SWeep Imaging with Fourier Transformation (SWIFT) with gradient modulation and DC navigator retrospective gating is introduced as a 3D cine magnetic resonance imaging (MRI) method for the lung. In anesthetized normal rats, the quasi-simultaneous excitation and acquisition in SWIFT enabled extremely high sensitivity to the fast-decaying parenchymal signals (TE=~4 μs), which are invisible with conventional MRI techniques. Respiratory motion information was extracted from DC navigator signals and the SWIFT data were reconstructed to 3D cine images with 16 respiratory phases. To test this technique's capabilities, rats exposed to > 95% O2 for 60 hours for induction of acute respiratory distress syndrome (ARDS), were imaged and compared with normal rat lungs (N=7 and 5 for ARDS and normal groups, respectively). SWIFT images showed lung tissue density differences along the gravity direction. In the cine SWIFT images, a parenchymal signal drop at the inhalation phase was consistently observed for both normal and ARDS rats due to lung inflation (i.e. decrease of the proton density), but the drop was less for ARDS rats. Depending on the respiratory phase and lung region, the lungs from the ARDS rats showed 1-24% higher parenchymal signal intensities relative to the normal rat lungs, likely due to accumulated extravascular water (EVLW). Those results demonstrate that SWIFT has high enough sensitivity for detecting the lung proton density changes due to gravity, different phases of respiration and accumulation of EVLW in the rat ARDS lungs.

Sensitivity of barley varieties to weather in Finland.

PubMed

Hakala, K; Jauhiainen, L; Himanen, S J; Rötter, R; Salo, T; Kahiluoto, H

2012-04-01

Global climate change is predicted to shift seasonal temperature and precipitation patterns. An increasing frequency of extreme weather events such as heat waves and prolonged droughts is predicted, but there are high levels of uncertainty about the nature of local changes. Crop adaptation will be important in reducing potential damage to agriculture. Crop diversity may enhance resilience to climate variability and changes that are difficult to predict. Therefore, there has to be sufficient diversity within the set of available cultivars in response to weather parameters critical for yield formation. To determine the scale of such 'weather response diversity' within barley (Hordeum vulgare L.), an important crop in northern conditions, the yield responses of a wide range of modern and historical varieties were analysed according to a well-defined set of critical agro-meteorological variables. The Finnish long-term dataset of MTT Official Variety Trials was used together with historical weather records of the Finnish Meteorological Institute. The foci of the analysis were firstly to describe the general response of barley to different weather conditions and secondly to reveal the diversity among varieties in the sensitivity to each weather variable. It was established that barley yields were frequently reduced by drought or excessive rain early in the season, by high temperatures at around heading, and by accelerated temperature sum accumulation rates during periods 2 weeks before heading and between heading and yellow ripeness. Low temperatures early in the season increased yields, but frost during the first 4 weeks after sowing had no effect. After canopy establishment, higher precipitation on average resulted in higher yields. In a cultivar-specific analysis, it was found that there were differences in responses to all but three of the studied climatic variables: waterlogging and drought early in the season and temperature sum accumulation rate before heading. The results suggest that low temperatures early in the season, delayed sowing, rain 3-7 weeks after sowing, a temperature change 3-4 weeks after sowing, a high temperature sum accumulation rate from heading to yellow ripeness and high temperatures (⩾25°C) at around heading could mostly be addressed by exploiting the traits found in the range of varieties included in the present study. However, new technology and novel genetic material are needed to enable crops to withstand periods of excessive rain or drought early in the season and to enhance performance under increased temperature sum accumulation rates prior to heading.

Assessment of carbon pools in two soils from the Campania region (Southwest, Italy) under different forest types

NASA Astrophysics Data System (ADS)

Álvarez-Romero, Marta; Papa, Stefania; Lozano-García, Beatriz; Parras-Alcántara, Luis; González-Pérez, José A.; Jordán, Antonio; Zavala, Lorena M.; González-Vila, Francisco J.; Coppola, Elio

2014-05-01

Soil is the largest carbon reservoir of terrestrial ecosystems, this reservoir is not inert, but it is constantly in a dynamic phase of accumulation an depletion. After the addition, in the soil, of organic residues of different origin and nature, two processes can occur in charge of SOM (Soil Organic Matter) during the pedogenesis: mineralization and humification. The accumulation of SOM in soil is controlled by the balance between carbon inputs and losses through mineralization and/or leaching. In particular the humification process leads to the formation of organic compounds (in some cases even complex organo-mineral) chemically stable able to distribute itself in the soil second rules of site-specific pedogenesis. The transport process along the profile can take very different forms which may extend in the formation of Bh horizons of accumulation in depth also strongly cemented (so-called ortstein). The transport process along the profile occurs for the occurrence of certain conditions such as deposition of high amounts of organic residues on the top of the profile, high porosity of the soil for the presence of coarse solid fractions (coarse sands or skeleton) that determinate a strong infiltrating capacity of the circulating waters, extreme temperatures can slow or stop the process of mineralization and/or humification in one intermediate step of the degradation process releasing organic metabolites with high or medium solubility and high loads of percolating water related to intense rainfall. The nature of the forest cover influence the quantity and quality of the organic materials deposited with marked differences between coniferous and deciduous especially in relation to resistance to degradation and production of intermediate metabolites. Two soils from Campania region located in Monte Santa Croce (Caserta, Italy) with andic properties, different forest cover (pine and chestnut) and that meets the requirements of the place and pedological formation suitable for the formation and accumulation of SOM in depth (Bh horizon) were studied. The content of the different soil C fractions was assessed for each soil profile and included: total extractable C, (TEC), total organic C (TOC), total extractable lipds (TEL), humified C (humic and fulvic acids, HA & FA) and non humic C (NHC), lignin C, cellulose C. Also were calculated parameters of humification, humification degree (DH), humification rate (HR), total level of humification (HU) and humification index (HI) The results are discussed in terms of how soil use and vegetation influences the identified C pools, and the humification indexes.

Extremely weak linear electron-phonon coupling in iron-free hemeproteins studied by phase-modulated photon echo

NASA Astrophysics Data System (ADS)

Lin, J. W.-I.; Tada, T.; Saikan, S.; Kushida, T.; Tani, T.

1991-10-01

The femtosecond accumulated photon echoes in iron-free myoglobin and iron-free cytochrome-C reveal that the linear electron-phonon coupling is extremely weak in these materials. This feature also manifests itself in the absence of the Stokes shift in the fluorescence spectrum over a wide range of temperatures from liquid-helium temperatures to near room temperatures. The origin of the weak coupling is attributed to the close packing of the porphyrin chromophores into a hydrophobic environment, which is constructed out of the polypeptide chain of the protein. The present results hint at the so-called hydrophobic compartmentalization of the chromophores as one of the important factors in reducing markedly the electron-phonon coupling in dye-polymer systems.

Spaceflight induced changes in the human proteome.

PubMed

Kononikhin, Alexey S; Starodubtseva, Natalia L; Pastushkova, Lyudmila Kh; Kashirina, Daria N; Fedorchenko, Kristina Yu; Brhozovsky, Alexander G; Popov, Igor A; Larina, Irina M; Nikolaev, Evgeny N

2017-01-01

Spaceflight is one of the most extreme conditions encountered by humans: Individuals are exposed to radiation, microgravity, hypodynamia, and will experience isolation. A better understanding of the molecular processes induced by these factors may allow us to develop personalized countermeasures to minimize risks to astronauts. Areas covered: This review is a summary of literature searches from PubMed, NASA, Roskosmos and the authors' research experiences and opinions. The review covers the available proteomic data on the effects of spaceflight factors on the human body, including both real space missions and ground-based model experiments. Expert commentary: Overall, the authors believe that the present background, methodology and equipment improvements will enhance spaceflight safety and support accumulation of new knowledge on how organisms adapt to extreme conditions.

Trehalose accumulation induced during the oxidative stress response is independent of TPS1 mRNA levels in Candida albicans.

PubMed

Zaragoza, Oscar; González-Párraga, Pilar; Pedreño, Yolanda; Alvarez-Peral, Francisco J; Argüelles, Juan-Carlos

2003-06-01

Growing cells of the Candida albicans trehalose-deficient mutant tps1/tps1 were extremely sensitive to severe oxidative stress exposure (H2O2). However, their viability was not affected after saline stress or heat-shock treatments, being roughly equivalent to that of the parental strain. In wild-type cells, these adverse conditions induced the intracellular accumulation of trehalose together with activation of trehalose-6P synthase, whereas the endogenous trehalose content and the corresponding biosynthetic activity were barely detectable in the tps1/tps1 mutant. The addition of cycloheximide did not prevent the marked induction of trehalose-6P synthase activity. Furthermore, the presence of H2O2 decreased the level of TPS1 mRNA expression. Hence, the conspicuous trehalose accumulation in response to oxidative stress is not induced by increased transcription of TPS1. Our results are consistent with a specific requirement of trehalose in order to withstand a severe oxidative stress in C. albicans, and suggest that trehalose accumulation observed under these conditions is a complex process that most probably involves post-translational modifications of the trehalose synthase complex.

Opposite extremes in ethylene/nitric oxide ratio induce cell death in suspension culture and root apices of tomato exposed to salt stress.

PubMed

Poór, P; Borbély, P; Kovács, Judit; Papp, Anita; Szepesi, Ágnes; Takács, Z; Tari, Irma

2014-12-01

The plant hormone ethylene or the gaseous signalling molecule nitric oxide (NO) may enhance salt stress tolerance by maintaining ion homeostasis, first of all K+/Na+ ratio of tissues. Ethylene and NO accumulation increased in the root apices and suspension culture cells of tomato at sublethal salt stress caused by 100 mM NaCl, however, the induction phase of programmed cell death (PCD) was different at lethal salt concentration. The production of ethylene by root apices and the accumulation of NO in the cells of suspension culture did not increase during the initiation of PCD after 250 mM NaCl treatment. Moreover, cells in suspension culture accumulated higher amount of reactive oxygen species which, along with NO deficiency contributed to cell death induction. The absence of ethylene in the apical root segments and the absence of NO accumulation in the cell suspension resulted in similar ion disequilibrium, namely K+/Na+ ratio of 1.41 ± 0.1 and 1.68 ± 0.3 in intact plant tissues and suspension culture cells, respectively that was not tolerated by tomato.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bogacz, Alex

Baseline design of the JLEIC booster synchrotron is presented. Its aim is to inject and accumulate heavy ions and protons at 285 MeV, to accelerate them to about 7 GeV, and finally to extract the beam into the ion collider ring. The Figure-8 ring features two 2600 achromatic arcs configured with negative momentum compaction optics, designed to avoid transition crossing for all ion species during the course of acceleration. The lattice also features a specialized high dispersion injection insert optimized to facilitate the transverse phase-space painting in both planes for multi-turn ion injection. Furthermore, the lattice has been optimized tomore » ease chromaticity correction with two families of sextupoles in each plane. The booster ring is configured with super-ferric, 3 Tesla bends. We are presently launching optimization of the booster synchrotron design to operate in the extreme space-charge dominated regime.« less

Correlation of Electrical Resistance to CMC Stress-Strain and Fracture Behavior Under High Heat-Flux Thermal and Stress Gradients

NASA Technical Reports Server (NTRS)

Appleby, Matthew; Morscher, Gregory; Zhu, Dongming

2015-01-01

Because SiCSiC ceramic matrix composites (CMCs) are under consideration for use as turbine engine hot-section components in extreme environments, it becomes necessary to investigate their performance and damage morphologies under complex loading and environmental conditions. Monitoring of electrical resistance (ER) has been shown as an effective tool for detecting damage accumulation of woven melt-infiltrated SiCSiC CMCs. However, ER change under complicated thermo-mechanical loading is not well understood. In this study a systematic approach is taken to determine the capabilities of ER as a relevant non-destructive evaluation technique for high heat-flux testing, including thermal gradients and localized stress concentrations. Room temperature and high temperature, laser-based tensile tests were conducted in which stress-dependent damage locations were determined using modal acoustic emission (AE) monitoring and compared to full-field strain mapping using digital image correlation (DIC). This information is then compared with the results of in-situ ER monitoring, post-test ER inspection and fractography in order to correlate ER response to convoluted loading conditions and damage evolution.

Tuffaceous Mud is a Volumetrically Important Volcaniclastic Facies of Submarine Arc Volcanism and Record of Climate Change

NASA Astrophysics Data System (ADS)

Gill, J. B.; Bongiolo, E. M.; Miyazaki, T.; Hamelin, C.; Jutzeler, M.; DeBari, S.; Jonas, A.-S.; Vaglarov, B. S.; Nascimento, L. S.; Yakavonis, M.

2018-04-01

The inorganic portion of tuffaceous mud and mudstone in an oceanic island arc can be mostly volcanic in origin. Consequently, a large volume of submarine volcaniclastic material is as extremely fine-grained as products of subaerial eruptions (<100 µm). Using results of IODP Expedition 350 in the Izu rear arc, we show that such material can accumulate at high rates (12-20 cm/k.y.) within 13 km of the nearest seamount summit and scores of km behind the volcanic front. The geochemistry of bulk, acid-leached mud, and its discrete vitriclasts, shows that >75% of the mud is volcanic, and that most of it was derived from proximal rear arc volcanic sources. It faithfully preserves integrated igneous geochemical information about arc evolution in much the same way that terrigenous shales track the evolution of continental crust. In addition, their high sedimentation rate enables high resolution study of climate cycles, including the effects of Pleistocene glaciation on the behavior of the Kuroshio Current in the Shikoku Basin south of Japan.

Stacking-fault strengthening of biomedical Co-Cr-Mo alloy via multipass thermomechanical processing.

PubMed

Yamanaka, Kenta; Mori, Manami; Sato, Shigeo; Chiba, Akihiko

2017-09-07

The strengthening of metallic biomaterials, such as Co-Cr-Mo and titanium alloys, is of crucial importance to the improvement of the durability of orthopedic implants. In the present study, we successfully developed a face-centered cubic (fcc) Co-Cr-Mo alloy with an extremely high yield strength (1400 MPa) and good ductility (12%) by multipass hot-rolling, which is suitable for industrial production, and examined the relevant strengthening mechanisms. Using an X-ray diffraction line-profile analysis, we revealed that a substantial increase in the number of stacking faults (SFs) in the fcc γ-matrix occurred at a greater height reduction (r), while physical modeling demonstrated that the contribution of the accumulated SFs (i.e., the reduction in SF spacing) with an increase in r successfully explains the entire strengthening behavior of the hot-rolled alloy. The present study sheds light on the importance of the SF strengthening mechanism, and will help to guide the design and manufacturing strategy for the high-strength Co-Cr-Mo alloys used in highly durable medical devices.

[Giant cystic lymphangioma breast. Report of a case with 20-year follow-up and review of the literature].

PubMed

Vargas-Hernández, Víctor Manuel; Tovar-Rodríguez, José María; Moreno-Eutimio, Mario Adán; Acosta-Altamirano, Gustavo

2014-01-01

Lymphangiomas are congenital malformations or acquired (secondary to trauma, infection or neoplasia) in the mammary gland, are extremely rare. These lesions tend to infiltrate surrounding tissues and malignant degeneration is extremely rare. Clinically manifests as benign masses, slow growing; diagnosed clinically and by imaging studies. Suegery with removal of the mass is performed for aesthetic reasons and to make differential diagnosis with other common injuries. Women 45 years of age with progressive increase in size of the left breast, breast trauma concerns and has no other symptoms.The histologic diagnosis was cystic lymphangioma giant left mammary gland. Lymphangiomas are uncommon lesions and extremely rare in the mammary gland, locally aggresive behavior and are benign, where abnormal lymphatic tissue has some ability to proliferate and accumulate large amounts of liquid, representing cystic appearance, as presented in our case. Local surgical excision is the treatment. In this first case of giant breast cystic lymphangioma reported in Mexico, which corroborates the benignity of the lesion.

Modeling of thermomechanical changes of extreme-ultraviolet mask and their dependence on absorber variation

NASA Astrophysics Data System (ADS)

Ban, Chung-Hyun; Park, Eun-Sang; Park, Jae-Hun; Oh, Hye-Keun

2018-06-01

Thermal and structural deformation of extreme-ultraviolet lithography (EUVL) masks during the exposure process may become important issues as these masks are subject to rigorous image placement and flatness requirements. The reflective masks used for EUVL absorb energy during exposure, and the temperature of the masks rises as a result. This can cause thermomechanical deformation that can reduce the pattern quality. The use of very thick low-thermal-expansion substrate materials (LTEMs) may reduce energy absorption, but they do not completely eliminate mask deformation. Therefore, it is necessary to predict and optimize the effects of energy transferred from the extreme-ultraviolet (EUV) light source and the resultant patterns of structured EUV masks with complex multilayers. Our study shows that heat accumulates in the masks as exposure progresses. It has been found that a higher absorber ratio (pattern density) applied to the patterning of EUV masks exacerbates the problem, especially in masks with more complex patterns.

Chemical and biochemical composition of caviar from different sturgeon species and origins.

PubMed

Wirth, M; Kirschbaum, F; Gessner, J; Krüger, A; Patriche, N; Billard, R

2000-08-01

The chemical and biochemical composition of caviar in 22 specimens of wild caught and of 2 farmed animals were measured. The results include grain size, protein and fat content, fatty acid composition of triglycerides and phospholipids, as well as the concentrations of relevant heavy metals and chlorinated hydrocarbons. The average protein content varied between 26.2 and 31.1% (wet weight) and fat from 10.9 to 19.4% (wet weight) with lowest values for caviar from farmed sturgeon. The triglycerides and phospholipids contained more n-3 fatty acids, especially eicosapentaenoic and docosahexaenoic acid than n-6 fatty acids. The copper and zinc concentrations varied between 1.20 and 1.69 and 10.3 and 12.4 mg/kg (wet weight), respectively. These values reflect the elevated requirement of sturgeons for these components. Lead content varied between 0.06 and 0.15 mg/kg (wet weight). The cadmium concentrations were less than 5 micrograms/kg (wet weight) leading to the conclusion that no accumulation took place in the eggs. The concentrations of sigma DDT and sigma PCB were extremely high in caviar from Huso huso compared to the samples of the other species thus reflecting the different food habits leading to increased bio-accumulation.

Mineralizing urban net-zero water treatment: Phase II field ...

EPA Pesticide Factsheets

Net-zero water (NZW) systems, or water management systems achieving high recycling rates and low residuals generation so as to avoid water import and export, can also conserve energy used to heat and convey water, while economically restoring local eco-hydrology. However, design and operating experience are extremely limited. The objective of this paper is to present the results of the second phase of operation of an advanced oxidation-based NZW pilot system designed, constructed, and operated for a period of two years, serving an occupied four-person apartment. System water was monitored, either continuously or thrice daily, for routine water quality parameters, minerals, and MicroTox® in-vitro toxicity, and intermittently for somatic and male-specific coliphage, adenovirus, Cryptosporidium, Giardia, emerging organic constituents (non-quantitative), and the Florida drinking water standards. All 115 drinking water standards with the exception of bromate were met in this phase. Neither virus nor protozoa were detected in the treated water, with the exception of measurement of adenovirus genome copies attributed to accumulation of inactive genetic material in hydraulic dead zones. Chemical oxygen demand was mineralized to 90% in treatment. Total dissolved solids were maintained at ∼500 mg/L at steady state, partially through aerated aluminum electrocoagulation. Bromate accumulation is projected to be controlled by aluminum electrocoagulation with separate dispo

[Growth in height of indigenous and non indigenous Chilean children].

PubMed

Bustos, Patricia; Weitzman, Mariana; Amigo, Hugo

2004-06-01

The aim of this study was to compare growth curves of stature in indigenous and non-indigenous children belonging to two levels of poverty and to establish the onset and evolution of the deficit. Children of indigenous and non-indigenous background living in communities of extreme and low poverty in Chile were studied and their height-for-age Z-score from birth until 6 year of age were compared. Mean weight at birth was within normal range, and no differences were found in ethnicity and levels of poverty. Length at birth was below the reference with the exception of the non indigenous newborn from counties of low poverty. Deficit in growth showed an early start, furthermore in indigenous children belonging to the extreme poverty, is from birth and progress through the 18 months. At 72 months the deficit reached -1.1 z scores in the indigenous of the extreme poverty versus -0.7 in the non indigenous group. Children from the low poverty had a Z-score of -0.4 z scores at 72 months without differences between ethnias. Indigenous of the extreme poverty had less accumulative growth while the indigenous of the low poverty areas growth satisfactory without differences with the non indigenous.

Influence of chemical speciation and biofilm composition on mercury accumulation by freshwater biofilms.

PubMed

Dranguet, P; Le Faucheur, S; Cosio, C; Slaveykova, V I

2017-01-25

Mercury (Hg) is a pollutant of high concern for aquatic systems due to the biomagnification of its methylated form along the food chain. However, in contrast to other metals, gaining knowledge of its bioavailable forms for aquatic microorganisms remains challenging, making Hg risk assessment difficult. Ubiquitous and sessile freshwater biofilms are well known to accumulate and to transform Hg present in their ambient environment. The present study thus aims to evaluate whether non-extractable (proxy of intracellular) Hg accumulated by biofilms could be a good indicator of Hg bioavailability for microorganisms in freshwater. To that end, the link between Hg concentration and speciation, as well as biofilm composition (percentage of abiotic, biotic, chlorophyll and phycocyanin-fractions and abundance of dsrA, gcs, merA and hgcA bacterial genes) and biofilm Hg accumulation was examined. The studied biofilms were grown on artificial substrata in four reservoirs along the Olt River (Romania), which was contaminated by Hg coming from chlor-alkali plant effluents. The 0.45 μm-filterable Hg concentrations in ambient waters were measured and inorganic IHg speciation was modelled. Biofilms were analyzed for their non-extractable IHg and methylmercury (MeHg) contents as well as for their composition. The non-extractable IHg content was related, but not significantly, to the concentration of total IHg (r 2 = 0.88, p = 0.061) whereas a significant correlation was found with the predicted IHg concentration that is not bound to dissolved organic matter (r 2 = 0.95, p = 0.027), despite its extremely low concentrations (10 -25 M), showing a limitation of the thermodynamic Hg modelling to predict Hg bioavailability. The studied biofilms were different in biomass and composition and a principal component analysis showed that the non-extractable IHg content correlated with the abundance of the merA and hgcA genes, while MeHg accumulation was only linked with the abundance of the rRNA 16S gene. The present study suggests that non-extractable IHg concentrations in biofilms are a useful proxy of IHg bioavailable forms in waters whereas the hgcA and merA genes are good biomarkers of both biofilm IHg exposure and bioavailability.

40Ar/39Ar geochronology of submarine Mauna Loa volcano, Hawaii

NASA Astrophysics Data System (ADS)

Jicha, Brian R.; Rhodes, J. Michael; Singer, Brad S.; Garcia, Michael O.

2012-09-01

New geochronologic constraints refine the growth history of Mauna Loa volcano and enhance interpretations of the petrologic, geochemical, and isotopic evolution of Hawaiian magmatism. We report results of 40Ar/39Ar incremental heating experiments on low-K, tholeiitic lavas from the 1.6 km high Kahuku landslide scarp cutting Mauna Loa's submarine southwest rift zone, and from lavas in a deeper section of the rift. Obtaining precise40Ar/39Ar ages from young, tholeiitic lavas containing only 0.2-0.3 wt.% K2O is challenging due to their extremely low radiogenic 40Ar contents. Analyses of groundmass from 45 lavas yield 14 new age determinations (31% success rate) with plateau and isochron ages that agree with stratigraphic constraints. Lavas collected from a 1250 m thick section in the landslide scarp headwall were all erupted around 470 ± 10 ka, implying an extraordinary period of accumulation of ˜25 mm/yr, possibly correlating with the peak of the shield-building stage. This rate is three times higher than the estimated vertical lava accumulation rate for shield-building at Mauna Kea (8.6 ± 3.1 mm/yr) based on results from the Hawaii Scientific Drilling Project. Between ˜470 and 273 ka, the lava accumulation rate along the southwest rift zone decreased dramatically to ˜1 mm/yr. We propose that the marked reduction in lava accumulation rate does not mark the onset of post-shield volcanism as previously suggested, but rather indicates the upward migration of the magma system as Mauna Loa evolved from a submarine stage of growth to one that is predominantly subaerial, thereby cutting off supply to the distal rift zone. Prior to ˜250 ka, lavas with Loihi-like isotopic signatures were erupted along with lavas having typical Mauna Loa values, implying greater heterogeneity in the plume source earlier in Mauna Loa's growth. In addition to refining accumulation rates and the isotopic evolution of the lavas erupted along the southwest rift zone, our new40Ar/39Ar results constrain the eruption of the Ninole Basalts from 227 to 108 ka and provide maximum estimates on the timing of the Ka Lae and South Kona landslides.

Three-Fingered RAVERs: Rapid Accumulation of Variations in Exposed Residues of Snake Venom Toxins

PubMed Central

Sunagar, Kartik; Jackson, Timothy N. W.; Undheim, Eivind A. B.; Ali, Syed. A.; Antunes, Agostinho; Fry, Bryan G.

2013-01-01

Three-finger toxins (3FTx) represent one of the most abundantly secreted and potently toxic components of colubrid (Colubridae), elapid (Elapidae) and psammophid (Psammophiinae subfamily of the Lamprophidae) snake venom arsenal. Despite their conserved structural similarity, they perform a diversity of biological functions. Although they are theorised to undergo adaptive evolution, the underlying diversification mechanisms remain elusive. Here, we report the molecular evolution of different 3FTx functional forms and show that positively selected point mutations have driven the rapid evolution and diversification of 3FTx. These diversification events not only correlate with the evolution of advanced venom delivery systems (VDS) in Caenophidia, but in particular the explosive diversification of the clade subsequent to the evolution of a high pressure, hollow-fanged VDS in elapids, highlighting the significant role of these toxins in the evolution of advanced snakes. We show that Type I, II and III α-neurotoxins have evolved with extreme rapidity under the influence of positive selection. We also show that novel Oxyuranus/Pseudonaja Type II forms lacking the apotypic loop-2 stabilising cysteine doublet characteristic of Type II forms are not phylogenetically basal in relation to other Type IIs as previously thought, but are the result of secondary loss of these apotypic cysteines on at least three separate occasions. Not all 3FTxs have evolved rapidly: κ-neurotoxins, which form non-covalently associated heterodimers, have experienced a relatively weaker influence of diversifying selection; while cytotoxic 3FTx, with their functional sites, dispersed over 40% of the molecular surface, have been extremely constrained by negative selection. We show that the a previous theory of 3FTx molecular evolution (termed ASSET) is evolutionarily implausible and cannot account for the considerable variation observed in very short segments of 3FTx. Instead, we propose a theory of Rapid Accumulation of Variations in Exposed Residues (RAVER) to illustrate the significance of point mutations, guided by focal mutagenesis and positive selection in the evolution and diversification of 3FTx. PMID:24253238

Lateglacial and Holocene climate, disturbance and permafrost peatland dynamics on the Seward Peninsula, western Alaska

USGS Publications Warehouse

Hunt, Stephanie D.; Yu, Zicheng; Jones, Miriam C.

2013-01-01

Northern peatlands have accumulated large carbon (C) stocks, acting as a long-term atmospheric C sink since the last deglaciation. How these C-rich ecosystems will respond to future climate change, however, is still poorly understood. Furthermore, many northern peatlands exist in regions underlain by permafrost, adding to the challenge of projecting C balance under changing climate and permafrost dynamics. In this study, we used a paleoecological approach to examine the effect of past climates and local disturbances on vegetation and C accumulation at a peatland complex on the southern Seward Peninsula, Alaska over the past ∼15 ka (1 ka = 1000 cal yr BP). We analyzed two cores about 30 m apart, NL10-1 (from a permafrost peat plateau) and NL10-2 (from an adjacent thermokarst collapse-scar bog), for peat organic matter (OM), C accumulation rates, macrofossil, pollen and grain size analysis.A wet rich fen occurred during the initial stages of peatland development at the thermokarst site (NL10-2). The presence of tree pollen from Picea spp. and Larix laricinia at 13.5–12.1 ka indicates a warm regional climate, corresponding with the well-documented Bølling–Allerød warm period. A cold and dry climate interval at 12.1–11.1 ka is indicated by the disappearance of tree pollen and increase in Poaceae pollen and an increase in woody material, likely representing a local expression of the Younger Dryas (YD) event. Following the YD, the warm Holocene Thermal Maximum (HTM) is characterized by the presence of Populus pollen, while the presence of Sphagnum spp. and increased C accumulation rates suggest high peatland productivity under a warm climate. Toward the end of the HTM and throughout the mid-Holocene a wet climate-induced several major flooding disturbance events at 10 ka, 8.1 ka, 6 ka, 5.4 ka and 4.7 ka, as evidenced by decreases in OM, and increases in coarse sand abundance and aquatic fossils (algae Chara and water fleas Daphnia). The initial peatland at permafrost site (NL10-1) is characterized by rapid C accumulation (66 g C m−2 yr−1), high OM content and a peak in Sphagnum spp. at 5.8–4.6 ka, suggesting the lack of permafrost. A transition to extremely low C accumulation rates of 6.3 g C m−2 yr−1 after 4.5 ka at this site suggests the onset of permafrost aggradation, likely in response to Neoglacial climate cooling as documented across the circum-Arctic region. A similar decrease in C accumulation rates also occurred at non-permafrost site NL10-2. Time-weighted C accumulation rates are 21.8 g C m−2 yr−1 for core NL10-1 during the last ∼6.5 ka and 14.8 g C m−2 yr−1 for core NL10-2 during the last ∼15 ka. Evidence from peat-core analysis and historical aerial photographs shows an abrupt increase in Sphagnum spp. and decrease in area of thermokarst lakes over the last century, suggesting major changes in hydrology and ecosystem structure, likely due to recent climate warming.Our results show that the thermokarst–permafrost complex was much more dynamic with high C accumulation rates under warmer climates in the past, while permafrost was stabilized and C accumulation slowed down following the Neoglacial cooling in the late Holocene. Furthermore, permafrost presence at local scales is controlled by both regional climate and site-specific factors, highlighting the challenge in projecting responses of permafrost peatlands and their C dynamics to future climate change.

Trace elements in native and transplanted Fontinalis antipyretica and Platyhypnidium riparioides from rivers polluted by uranium mining.

PubMed

Kosior, Grzegorz; Steinnes, Eiliv; Samecka-Cymerman, Aleksandra; Lierhagen, Syverin; Kolon, Krzysztof; Dołhańczuk-Śródka, Agnieszka; Ziembik, Zbigniew

2017-03-01

The past uranium/polymetallic mining activities in the Sudety (SW Poland) left abandoned mines, pits, and dumps of waste rocks with trace elements and radionuclides which may erode or leach out and create a potential risk for the aquatic ecosystem, among others. In the present work four rivers affected by effluents from such mines were selected to evaluate the application of aquatic mosses for the bioindication of 56 elements. Naturally growing F. antipyretica and P. riparioides were compared with transplanted samples of the same species. The results demonstrate serious pollution of the examined rivers, especially with As, Ba, Fe, Mn, Pb, Ti, U and Zn, reaching extremely high concentrations in native moss samples. In the most polluted rivers native F. antipyretica and P. riparioides samples showed significantly higher concentrations of As, Ba, Cu, Fe, La, Nd, Ni, Pb, U and Zn than corresponding transplanted samples, whereas at less polluted sites a reverse situation was sometimes observed. Transplanted moss moved from clean to extremely polluted rivers probably protects itself against the accumulation of toxic elements by reducing their uptake. Selection of native or transplanted F. antipyretica and P. riparioides depended on the pollution load. Copyright © 2016. Published by Elsevier Ltd.

Weather forecast performances for complex orographic areas: Impact of different grid resolutions and of geographic data on heavy rainfall event simulations in Sicily

NASA Astrophysics Data System (ADS)

Caccamo, M. T.; Castorina, G.; Colombo, F.; Insinga, V.; Maiorana, E.; Magazù, S.

2017-12-01

Over the past decades, Sicily has undergone an increasing sequence of extreme weather events that have produced, besides huge damages to both environment and territory, the death of hundreds of people together with the evacuation of thousands of residents, which have permanently lost their properties. In this framework, with this paper we have investigated the impact of different grid spacing and geographic data on the performance of forecasts over complex orographic areas. In order to test the validity of this approach we have analyzed and discussed, as case study, the heavy rainfall occurred in Sicily during the night of October 10, 2015. In just 9 h, a Mediterranean depression, centered on the Tunisian coastline, produced a violent mesoscale storm localized on the Peloritani Mountains with a maximum rain accumulation of about 200 mm. The results of these simulations were obtained using the Weather Research and Forecasting (WRF-ARW) Model, version 3.7.1, at different grid spacing values and the Two Way Nesting procedure with a sub-domain centered on the area of interest. The results highlighted that providing correct and timely forecasts of extreme weather events is a challenge that could have been efficiently and effectively countered using proper employment of high spatial resolution models.

Continuous Isotropic-Nematic Transition in Amyloid Fibril Suspensions Driven by Thermophoresis.

PubMed

Vigolo, Daniele; Zhao, Jianguo; Handschin, Stephan; Cao, Xiaobao; deMello, Andrew J; Mezzenga, Raffaele

2017-04-27

The isotropic and nematic (I + N) coexistence for rod-like colloids is a signature of the first-order thermodynamics nature of this phase transition. However, in the case of amyloid fibrils, the biphasic region is too small to be experimentally detected, due to their extremely high aspect ratio. Herein, we study the thermophoretic behaviour of fluorescently labelled β-lactoglobulin amyloid fibrils by inducing a temperature gradient across a microfluidic channel. We discover that fibrils accumulate towards the hot side of the channel at the temperature range studied, thus presenting a negative Soret coefficient. By exploiting this thermophoretic behaviour, we show that it becomes possible to induce a continuous I-N transition with the I and N phases at the extremities of the channel, starting from an initially single N phase, by generating an appropriate concentration gradient along the width of the microchannel. Accordingly, we introduce a new methodology to control liquid crystal phase transitions in anisotropic colloidal suspensions. Because the induced order-order transitions are achieved under stationary conditions, this may have important implications in both applied colloidal science, such as in separation and fractionation of colloids, as well as in fundamental soft condensed matter, by widening the accessibility of target regions in the phase diagrams.

Relevance of the correlation between precipitation and the 0 °C isothermal altitude for extreme flood estimation

NASA Astrophysics Data System (ADS)

Zeimetz, Fraenz; Schaefli, Bettina; Artigue, Guillaume; García Hernández, Javier; Schleiss, Anton J.

2017-08-01

Extreme floods are commonly estimated with the help of design storms and hydrological models. In this paper, we propose a new method to take into account the relationship between precipitation intensity (P) and air temperature (T) to account for potential snow accumulation and melt processes during the elaboration of design storms. The proposed method is based on a detailed analysis of this P-T relationship in the Swiss Alps. The region, no upper precipitation intensity limit is detectable for increasing temperature. However, a relationship between the highest measured temperature before a precipitation event and the duration of the subsequent event could be identified. An explanation for this relationship is proposed here based on the temperature gradient measured before the precipitation events. The relevance of these results is discussed for an example of Probable Maximum Precipitation-Probable Maximum Flood (PMP-PMF) estimation for the high mountainous Mattmark dam catchment in the Swiss Alps. The proposed method to associate a critical air temperature to a PMP is easily transposable to similar alpine settings where meteorological soundings as well as ground temperature and precipitation measurements are available. In the future, the analyses presented here might be further refined by distinguishing between precipitation event types (frontal versus orographic).

Aging without Dementia is Achievable: Current Evidence from Epidemiological Research.

PubMed

Qiu, Chengxuan; Fratiglioni, Laura

2018-01-01

Both the incidence and the prevalence of dementia increase exponentially with increasing age. This raises the question of whether dementia is an inevitable consequence of aging or whether aging without dementia is achievable. In this review article, we sought to summarize the current evidence from epidemiological and neuropathological studies that investigated this topic. Epidemiological studies have shown that dementia could be avoided even at extreme old ages (e.g., centenarians or supercentenarians). Furthermore, clinico-neuropathological studies found that nearly half of centenarians with dementia did not have sufficient brain pathology to explain their cognitive symptoms, while intermediate-to-high Alzheimer pathology was present in around one-third of very old people without dementia or cognitive impairment. This suggests that certain compensatory mechanisms (e.g., cognitive reserve or resilience) may play a role in helping people in extreme old ages escape dementia syndrome. Finally, evidence has been accumulating in recent years indicating that the incidence of dementia has declined in Europe and North America, which supports the view that the risk of dementia in late life is modifiable. Evidence has emerged that intervention strategies that promote general health, maintain vascular health, and increase cognitive reserve are likely to help preserve cognitive function till late life, thus achieving the goal of aging without dementia.

Aging without Dementia is Achievable: Current Evidence from Epidemiological Research

PubMed Central

Qiu, Chengxuan; Fratiglioni, Laura

2018-01-01

Both the incidence and the prevalence of dementia increase exponentially with increasing age. This raises the question of whether dementia is an inevitable consequence of aging or whether aging without dementia is achievable. In this review article, we sought to summarize the current evidence from epidemiological and neuropathological studies that investigated this topic. Epidemiological studies have shown that dementia could be avoided even at extreme old ages (e.g., centenarians or supercentenarians). Furthermore, clinico-neuropathological studies found that nearly half of centenarians with dementia did not have sufficient brain pathology to explain their cognitive symptoms, while intermediate-to-high Alzheimer pathology was present in around one-third of very old people without dementia or cognitive impairment. This suggests that certain compensatory mechanisms (e.g., cognitive reserve or resilience) may play a role in helping people in extreme old ages escape dementia syndrome. Finally, evidence has been accumulating in recent years indicating that the incidence of dementia has declined in Europe and North America, which supports the view that the risk of dementia in late life is modifiable. Evidence has emerged that intervention strategies that promote general health, maintain vascular health, and increase cognitive reserve are likely to help preserve cognitive function till late life, thus achieving the goal of aging without dementia. PMID:29562544

Current strain accumulation in the hinterland of the northwest Himalaya constrained by landscape analyses, basin-wide denudation rates, and low temperature thermochronology

NASA Astrophysics Data System (ADS)

Morell, Kristin D.; Sandiford, Mike; Kohn, Barry; Codilean, Alexandru; Fülöp, Réka-H.; Ahmad, Talat

2017-11-01

Rupture associated with the 25 April 2015 Mw 7.8 Gorkha (Nepal) earthquake highlighted our incomplete understanding of the structural architecture and seismic cycle processes that lead to Himalayan mountain building in Central Nepal. In this paper we investigate the style and kinematics of active mountain building in the Himalayan hinterland of Northwest India, approximately 400 km to the west of the hypocenter of the Nepal earthquake, via a combination of landscape metrics and long- (Ma) and short-term (ka) erosion rate estimates (from low temperature thermochronometry and basin-wide denudation rate estimates from 10Be concentrations). We focus our analysis on the area straddling the PT2, the physiographic transition between the Lesser and High Himalaya that has yielded important insights into the nature of hinterland deformation across much of the Himalaya. Our results from Northwest India reveal a distinctive PT2 that separates a Lesser Himalaya region with moderate relief (∼1000 m) and relatively slow erosion (<1 mm/yr) from a High Himalaya with extreme relief (∼2500 m), steep channels, and erosion rates that approach or exceed 1 mm/yr. The close spatial similarity in relative rates of long- and short-term erosion suggests that the gradient in rock uplift rates inferred from the landscape metrics across the PT2 has persisted in the same relative position since at least the past 1.5 Ma. We interpret these observations to suggest that strain accumulation in this hinterland region throughout at least the past 1.5 Ma has been accomplished both by crustal thickening via duplexing and overthrusting along transient emergent faults. Despite the >400 km distance between them, similar spatiotemporal patterns of erosion and deformation observed in Northwest India and Central Nepal suggest both regions experience similar styles of active strain accumulation and both are susceptible to large seismic events.

A Novel Adaptation Mechanism Underpinning Algal Colonization of a Nuclear Fuel Storage Pond.

PubMed

MeGraw, Victoria E; Brown, Ashley R; Boothman, Christopher; Goodacre, Royston; Morris, Katherine; Sigee, David; Anderson, Lizzie; Lloyd, Jonathan R

2018-06-26

Geochemical analyses alongside molecular techniques were used to characterize the microbial ecology and biogeochemistry of an outdoor spent nuclear fuel storage pond at Sellafield, United Kingdom, that is susceptible to seasonal algal blooms that cause plant downtime. 18S rRNA gene profiling of the filtered biomass samples showed the increasing dominance of a species closely related to the alga Haematococcus pluvialis , alongside 16S rRNA genes affiliated with a diversity of freshwater bacteria, including Proteobacteria and Cyanobacteria High retention of 137 Cs and 90 Sr on pond water filters coincided with high levels of microbial biomass in the pond, suggesting that microbial colonization may have an important control on radionuclide fate in the pond. To interpret the unexpected dominance of Haematococcus species during bloom events in this extreme environment, the physiological response of H. pluvialis to environmentally relevant ionizing radiation doses was assessed. Irradiated laboratory cultures produced significant quantities of the antioxidant astaxanthin, consistent with pigmentation observed in pond samples. Fourier transform infrared (FT-IR) spectroscopy suggested that radiation did not have a widespread impact on the metabolic fingerprint of H. pluvialis in laboratory experiments, despite the 80-Gy dose. This study suggests that the production of astaxanthin-rich encysted cells may be related to the preservation of the Haematococcus phenotype, potentially allowing it to survive oxidative stress arising from radiation doses associated with the spent nuclear fuel. The oligotrophic and radiologically extreme conditions in this environment do not prevent extensive colonization by microbial communities, which play a defining role in controlling the biogeochemical fate of major radioactive species present. IMPORTANCE Spent nuclear fuel is stored underwater in large ponds prior to processing and disposal. Such environments are intensively radioactive but can be colonized by microorganisms. Colonization of such inhospitable radioactive ponds is surprising, and the survival mechanisms that microbes use is of fundamental interest. It is also important to study these unusual ecosystems, as microbes growing in the pond waters may accumulate radionuclides present in the waters (for bioremediation applications), while high cell loads can hamper management of the ponds due to poor visibility. In this study, an outdoor pond at the U.K. Sellafield facility was colonized by a seasonal bloom of microorganisms, able to accumulate high levels of 137 Cs and 90 Sr and dominated by the alga Haematococcus This organism is not normally associated with deep water bodies, but it can adapt to radioactive environments via the production of the pigment astaxanthin, which protects the cells from radiation damage. Copyright © 2018 MeGraw et al.

Arsenic tolerance in Arabidopsis is mediated by two ABCC-type phytochelatin transporters

PubMed Central

Song, Won-Yong; Park, Jiyoung; Mendoza-Cózatl, David G.; Suter-Grotemeyer, Marianne; Shim, Donghwan; Hörtensteiner, Stefan; Geisler, Markus; Weder, Barbara; Rea, Philip A.; Rentsch, Doris; Schroeder, Julian I.; Lee, Youngsook; Martinoia, Enrico

2010-01-01

Arsenic is an extremely toxic metalloid causing serious health problems. In Southeast Asia, aquifers providing drinking and agricultural water for tens of millions of people are contaminated with arsenic. To reduce nutritional arsenic intake through the consumption of contaminated plants, identification of the mechanisms for arsenic accumulation and detoxification in plants is a prerequisite. Phytochelatins (PCs) are glutathione-derived peptides that chelate heavy metals and metalloids such as arsenic, thereby functioning as the first step in their detoxification. Plant vacuoles act as final detoxification stores for heavy metals and arsenic. The essential PC–metal(loid) transporters that sequester toxic metal(loid)s in plant vacuoles have long been sought but remain unidentified in plants. Here we show that in the absence of two ABCC-type transporters, AtABCC1 and AtABCC2, Arabidopsis thaliana is extremely sensitive to arsenic and arsenic-based herbicides. Heterologous expression of these ABCC transporters in phytochelatin-producing Saccharomyces cerevisiae enhanced arsenic tolerance and accumulation. Furthermore, membrane vesicles isolated from these yeasts exhibited a pronounced arsenite [As(III)]–PC2 transport activity. Vacuoles isolated from atabcc1 atabcc2 double knockout plants exhibited a very low residual As(III)–PC2 transport activity, and interestingly, less PC was produced in mutant plants when exposed to arsenic. Overexpression of AtPCS1 and AtABCC1 resulted in plants exhibiting increased arsenic tolerance. Our findings demonstrate that AtABCC1 and AtABCC2 are the long-sought and major vacuolar PC transporters. Modulation of vacuolar PC transporters in other plants may allow engineering of plants suited either for phytoremediation or reduced accumulation of arsenic in edible organs. PMID:21078981

The impact of extremely low frequency electromagnetic fields on stream periphyton: An eleven-year study

USGS Publications Warehouse

Burton, T.M.; Uzarski, D.G.; Stelzer, R.S.; Eggert, S.L.; Sobczak, W.V.; Mullen, D.M.

2000-01-01

Potential effects of extremely low frequency (ELF) electromagnetic fields on periphyton were studied from 1983 to 1993 using a Before, After, Control and Impact design. The study was conducted at two sites on the Ford River, a fourth-order brown water trout stream in Dickinson County, Michigan. The Reference site received 4.9-6.5 times less exposure to ground electric fields and from 300 to 334 times less exposure to magnetic flux from 1989 to 1993 when the antenna was operational at 76 Hz than did the Antenna site. The objective of the study was to determine if ELF electromagnetic fields had caused changes in structure and/or function of algal communities in the Ford River. Significant differences in chlorophyll a standing crop and daily accumulation rate (a surrogate for primary productivity), and organic matter standing crop and daily accumulation rate were observed between the Reference and Antenna site after the antenna became operational. These four related community function variables all increased at the Antenna site with largest and most consistent increases occurring for chlorophyll measures. Compared to pre-operational data, the increase in chlorophyll at the Antenna site also occurred during a period of low amperage testing in 1986-1988, and did not increase further when the antenna became fully operational in 1989, indicating a low threshold for response. There was no significant differences between the Antenna and Reference sites in community structure variables such as diversity, evenness and the relative abundance of dominant diatoms. Thus, 76 Hz ELF electromagnetic radiation apparently did not change the basic makeup of the diatom community but did increase accumulation rates and standing crops of chlorophyll a and organic matter.

Metal accumulation screening of the Río Tinto flora (Huelva, Spain).

PubMed

de la Fuente, Vicenta; Rufo, Lourdes; Rodríguez, Nuria; Amils, Ricardo; Zuluaga, Javier

2010-06-01

Río Tinto (Huelva, Spain) is located in one of the most important mining regions in the world. Its soils are characterized by their extreme acidity and elevated concentrations of heavy metals. Due to these characteristics, the Tinto ecosystem is considered unique and an ideal location to study biological adaptations to this type of habitat. Plant species that present these adaptations might be useful to mining and other metal pollution restoration programs. This study reports the results for the screening of Ca, Mg, Na, Mn, Fe, Ni, Cu, Zn, As, and Pb in aerial tissues of 97 plant species from the Tinto basin flora. In addition, plant-soil relationships were analyzed using the biological absorption coefficient (BAC) to detect the main plant adaptations in the Tinto flora. The species selected are representative of the biomass of the main dominant edaphophile and climatophile vegetation communities of the three river sections, forest, and subseral stages. Plant and soil elemental analyses were performed using inductively coupled plasma-mass spectrometry technique (ICP-MS). The results indicate that in general, Tinto flora shows a pattern of accumulation of the analyzed elements in aerial tissues which agrees with the nutritional requirements of vascular plants (macronutrients > micronutrients > indifferent or toxic elements). Among macronutrients, Ca seems to be an essential element in this habitat. This element accumulates in the aerial plant tissues. Basically, the Río Tinto flora is made of Fe, Cu, Zn, Ni, As, and Pb excluders, although some analyzed species of Erica, Quercus, Lavandula, Cistus, Genista, and Cytisus genera can be considered Mn accumulators. The results of this study make up a body of fundamental knowledge of the strategies used by plants to thrive in habitats with high concentrations of toxic heavy metals. This information is vital when it comes to planning a restoration program. Plants must be selected and used according to the requirements, always respecting the characteristics of the territory and facilitating the development of suitable vegetation.

Anaerobic metabolism at thermal extremes: a metabolomic test of the oxygen limitation hypothesis in an aquatic insect.

PubMed

Verberk, W C E P; Sommer, U; Davidson, R L; Viant, M R

2013-10-01

Thermal limits in ectotherms may arise through a mismatch between supply and demand of oxygen. At higher temperatures, the ability of their cardiac and ventilatory activities to supply oxygen becomes insufficient to meet their elevated oxygen demand. Consequently, higher levels of oxygen in the environment are predicted to enhance tolerance of heat, whereas reductions in oxygen are expected to reduce thermal limits. Here, we extend previous research on thermal limits and oxygen limitation in aquatic insect larvae and directly test the hypothesis of increased anaerobic metabolism and lower energy status at thermal extremes. We quantified metabolite profiles in stonefly nymphs under varying temperatures and oxygen levels. Under normoxia, the concept of oxygen limitation applies to the insects studied. Shifts in the metabolome of heat-stressed stonefly nymphs clearly indicate the onset of anaerobic metabolism (e.g., accumulation of lactate, acetate, and alanine), a perturbation of the tricarboxylic acid cycle (e.g., accumulation of succinate and malate), and a decrease in energy status (e.g., ATP), with corresponding decreases in their ability to survive heat stress. These shifts were more pronounced under hypoxic conditions, and negated by hyperoxia, which also improved heat tolerance. Perturbations of metabolic pathways in response to either heat stress or hypoxia were found to be somewhat similar but not identical. Under hypoxia, energy status was greatly compromised at thermal extremes, but energy shortage and anaerobic metabolism could not be conclusively identified as the sole cause underlying thermal limits under hyperoxia. Metabolomics proved useful for suggesting a range of possible mechanisms to explore in future investigations, such as the involvement of leaking membranes or free radicals. In doing so, metabolomics provided a more complete picture of changes in metabolism under hypoxia and heat stress.

What are the implications of variation in root hair length on tolerance to phosphorus deficiency in combination with water stress in barley (Hordeum vulgare)?

PubMed Central

Brown, L.K.; George, T.S.; Thompson, J.A.; Wright, G.; Lyon, J.; Dupuy, L.; Hubbard, S.F.; White, P.J.

2012-01-01

Background and Aims Phosphorus commonly limits crop yield and is frequently applied as fertilizer; however, supplies of quality rock phosphate for fertilizer production are diminishing. Plants have evolved many mechanisms to increase their P-fertilizer use efficiency, and an understanding of these traits could result in improved long-term sustainability of agriculture. Here a mutant population is utilized to assess the impact of root hair length on P acquisition and yield under P-deficient conditions alone or when combined with drought. Methods Mutants with various root hair phenotypes were grown in the glasshouse in pots filled with soil representing sufficient and deficient P treatments and, in one experiment, a range of water availability was also imposed. Plants were variously harvested at 7 d, 8 weeks and 14 weeks, and variables including root hair length, rhizosheath weight, biomass, P accumulation and yield were measured. Key Results The results confirmed the robustness of the root hair phenotypes in soils and their relationship to rhizosheath production. The data demonstrated that root hair length is important for shoot P accumulation and biomass, while only the presence of root hairs is critical for yield. Root hair presence was also critical for tolerance to extreme combined P deficit and drought stress, with genotypes with no root hairs suffering extreme growth retardation in comparison with those with root hairs. Conclusions The results suggest that although root hair length is not important for maintaining yield, the presence of root hairs is implicit to sustainable yield of barley under P-deficient conditions and when combined with extreme drought. Root hairs are a trait that should be maintained in future germplasm. PMID:22539540

Properties of Zip4 accumulation during zinc deficiency and its usefulness to evaluate zinc status: a study of the effects of zinc deficiency during lactation.

PubMed

Hashimoto, Ayako; Nakagawa, Miki; Tsujimura, Natsuki; Miyazaki, Shiho; Kizu, Kumiko; Goto, Tomoko; Komatsu, Yusuke; Matsunaga, Ayu; Shirakawa, Hitoshi; Narita, Hiroshi; Kambe, Taiho; Komai, Michio

2016-03-01

Systemic and cellular zinc homeostasis is elaborately controlled by ZIP and ZnT zinc transporters. Therefore, detailed characterization of their expression properties is of importance. Of these transporter proteins, Zip4 functions as the primarily important transporter to control systemic zinc homeostasis because of its indispensable function of zinc absorption in the small intestine. In this study, we closely investigated Zip4 protein accumulation in the rat small intestine in response to zinc status using an anti-Zip4 monoclonal antibody that we generated and contrasted this with the zinc-responsive activity of the membrane-bound alkaline phosphatase (ALP). We found that Zip4 accumulation is more rapid in response to zinc deficiency than previously thought. Accumulation increased in the jejunum as early as 1 day following a zinc-deficient diet. In the small intestine, Zip4 protein expression was higher in the jejunum than in the duodenum and was accompanied by reduction of ALP activity, suggesting that the jejunum can become zinc deficient more easily. Furthermore, by monitoring Zip4 accumulation levels and ALP activity in the duodenum and jejunum, we reasserted that zinc deficiency during lactation may transiently alter plasma glucose levels in the offspring in a sex-specific manner, without affecting homeostatic control of zinc metabolism. This confirms that zinc nutrition during lactation is extremely important for the health of the offspring. These results reveal that rapid Zip4 accumulation provides a significant conceptual advance in understanding the molecular basis of systemic zinc homeostatic control, and that properties of Zip4 protein accumulation are useful to evaluate zinc status closely. Copyright © 2016 the American Physiological Society.

Shear-wave Velocity Structure and Inter-Seismic Strain Accumulation in the Up-Dip Region of the Cascadia Subduction Zone: Similarities to Tohoku?

NASA Astrophysics Data System (ADS)

Collins, J. A.; McGuire, J. J.; Wei, M.

2013-12-01

The up-dip region of subduction zone thrusts is difficult to study using land-based seismic and geodetic networks, yet documenting its ability to store and release elastic strain is critical for understanding the mechanics of great subduction earthquakes and tsunami generation. The 2011 Tohoku earthquake produced extremely large slip in the shallowest portion of the subduction zone beneath a region of the fore-arc that is comprised of extremely low-velocity, unconsolidated sediments [Tsuru et al. JGR 2012]. The influence of the sediment material properties on the co-seismic slip distribution and tsunami generation can be considerable through both the effects on the dynamic wavefield during the rupture [Kozdon and Dunham, BSSA 2012] and potentially the build up of strain during the inter-seismic period. As part of the 2010-2011 SeaJade experiment [Scherwath et al, EOS 2011], we deployed 10 ocean bottom seismographs (OBS) on the continental slope offshore of Vancouver Island in the region of the NEPTUNE Canada observatory. One goal of the experiment is to measure the shear modulus of the sediments lying above the subducting plate using the seafloor compliance technique. Using seafloor acceleration measured by broadband seismometer and seafloor pressure measured by Differential Pressure Gauge (DPG), we estimate the compliance spectrum in the infra-gravity wave band (~0.002-0.04 Hz) at 9 sites following the methodology of Crawford et al. [JGR, 1991]. We calibrated DPG sensitivities using laboratory measurements and by comparing teleseismic Rayleigh arrivals recorded on the seismometer and DPG channels [Webb, pers. comm]. We correct the vertical-component seismometer data for tilt using the procedure of Crawford and Webb [BSSA, 2000], Corrections for the gravitational attraction of the surface gravity waves [Crawford et al., JGR, 1998] are important at frequencies of 0.003-0.006 Hz only. Typically, the coherences are high (>0.7) in the 0.006 to 0.03 Hz range. We invert the measured compliances in this frequency band using a genetic algorithm that solves for the S-wave velocity, P-wave velocity, and density in a layered structure. By including constraints on the Vp distribution from active-source studies, these parameters appear well constrained down to about 4 km depth from our dataset. There is a clear difference in observed compliance values between stations close to the deformation front (~10 km) and those further up the continental slope (~30-40 km) indicating a region of unconsolidated, high-porosity sediment similar to the off-Tohoku region. The low S-wave velocities and high Vp/Vs ratios in the up-dip region correspond to unconsolidated high-porosity sediments. We calculated the effect of this material property contrast on the inter-seismic strain accumulation in the up-dip region of the subduction zone using a finite element model and find that the sediments can increase the amount of inter-seismic strain accumulated in the up-dip region by >100% relative to a homogenous elastic model.

Tropical river suspended sediment and solute dynamics in storms during an extreme drought

USGS Publications Warehouse

Clark, Kathryn E.; Shanley, James B.; Scholl, Martha A.; Perdrial, Nicolas; Perdrial, Julia N.; Plante, Alain F.; McDowell, William H.

2017-01-01

Droughts, which can strongly affect both hydrologic and biogeochemical systems, are projected to become more prevalent in the tropics in the future. We assessed the effects of an extreme drought during 2015 on stream water composition in the Luquillo Mountains of Puerto Rico. We demonstrated that drought base flow in the months leading up to the study was sourced from trade-wind orographic rainfall, suggesting a resistance to the effects of an otherwise extreme drought. In two catchments (Mameyes and Icacos), we sampled a series of four rewetting events that partially alleviated the drought. We collected and analyzed dissolved constituents (major cations and anions, organic carbon, and nitrogen) and suspended sediment (inorganic and organic matter (particulate organic carbon and particulate nitrogen)). The rivers appeared to be resistant to extreme drought, recovering quickly upon rewetting, as (1) the concentration-discharge (C-Q) relationships deviated little from the long-term patterns; (2) “new water” dominated streamflow during the latter events; (3) suspended sediment sources had accumulated in the channel during the drought flushed out during the initial events; and (4) the severity of the drought, as measured by the US drought monitor, was reduced dramatically after the rewetting events. Through this interdisciplinary study, we were able to investigate the impact of extreme drought through rewetting events on the river biogeochemistry.

Centennial and Extreme Climate Variability in the Last 1500 Year from the Belize Central Shelf Lagoon (Central America): Successive Droughts and Floods Linked to the Demise of the Mayan Civilization

NASA Astrophysics Data System (ADS)

Droxler, A. W.; Agar Cetin, A.; Bentley, S. J.

2014-12-01

This study focuses on the last 1500 yr precipitation record archived in the mixed carbonate/siliciclastic sediments accumulated in the Belize Central Shelf Lagoon, part of the Yucatan Peninsula eastern continental margin, proximal to the land areas where the Mayan Civilization thrived and then abruptly collapsed. This study is mainly based upon the detailed analyses of cores, BZE-RH-SVC-58 and 68, retrieved in 30 and 19 m of water depth from Elbow Caye Lagoon and English Caye Channel, respectively. The core timeframe is well-constrained by AMS radiocarbon dating of benthic foraminifera, Quinqueloculina. Carbonate content was determined by carbonate bomb, particle size fractions with a Malvern Master Sizer 2000 particle size analyzer, and element (Ti, Si, K, Fe, Al, Ca, and Sr) counts via X-Ray Fluorescence (XRF). The variations of elements such as Ti and K counts, and Ti/Al in these two cores have recorded, in the past past 1500 years, the weathering rate variations of the adjacent Maya Mountain, defining alternating periods of high precipitation and droughts, linked to large climate fluctuations and extreme events, highly influenced by the ITCZ latitudinal migration. The CE 800-900 century just preceding the Medieval Climate Anomaly (MCA), characterized by unusually low Ti counts and Ti/Al, is interpreted to represent a time of low precipitation and resulting severe droughts in the Yucatan Peninsula, contemporaneous with the Mayan Terminal Classic Collapse. High Ti counts and Ti/Al, although highly variable, during the MCA (CE 900-1350) are interpreted as an unusually warm period characterized by two 100-to-250 years-long intervals of higher precipitation when the number of tropical cyclones peaked. These two intervals of high precipitation during the MCA are separated by a century (CE 1000 -1100) of severe droughts and low tropical storm frequency coinciding with the collapse of Chichen Itza (CE 1040-1100). The Little Ice Age (CE 1350-1850), several centuries during which Ti counts and Ti/Al reach minimum values, is characterized by systematic drier and colder climate conditions with low frequency of tropical cyclones. Two extreme Ti and K count minima might coincide with historical drought times and related Caribbean-wide famines in the year CE 1535 and the last third of the 18th century (CE 1765-1800).

Comfort food is comforting to those most stressed: evidence of the chronic stress response network in high stress women.

PubMed

Tomiyama, A Janet; Dallman, Mary F; Epel, Elissa S

2011-11-01

Chronically stressed rodents who are allowed to eat calorie-dense "comfort" food develop greater mesenteric fat, which in turn dampens hypothalamic-pituitary-adrenocortical (HPA) axis activity. We tested whether similar relations exist in humans, at least cross-sectionally. Fifty-nine healthy premenopausal women were exposed to a standard laboratory stressor to examine HPA response to acute stress and underwent diurnal saliva sampling for basal cortisol and response to dexamethasone administration. Based on perceived stress scores, women were divided into extreme quartiles of low versus high stress categories. We found as hypothesized that the high stress group had significantly greater BMI and sagittal diameter, and reported greater emotional eating. In response to acute lab stressor, the high stress group showed a blunted cortisol response, lower diurnal cortisol levels, and greater suppression in response to dexamethasone. These cross-sectional findings support the animal model, which suggests that long-term adaptation to chronic stress in the face of dense calories result in greater visceral fat accumulation (via ingestion of calorie-dense food), which in turn modulates HPA axis response, resulting in lower cortisol levels. Copyright © 2011 Elsevier Ltd. All rights reserved.

Power Enhancement in High Dimensional Cross-Sectional Tests

PubMed Central

Fan, Jianqing; Liao, Yuan; Yao, Jiawei

2016-01-01

We propose a novel technique to boost the power of testing a high-dimensional vector H : θ = 0 against sparse alternatives where the null hypothesis is violated only by a couple of components. Existing tests based on quadratic forms such as the Wald statistic often suffer from low powers due to the accumulation of errors in estimating high-dimensional parameters. More powerful tests for sparse alternatives such as thresholding and extreme-value tests, on the other hand, require either stringent conditions or bootstrap to derive the null distribution and often suffer from size distortions due to the slow convergence. Based on a screening technique, we introduce a “power enhancement component”, which is zero under the null hypothesis with high probability, but diverges quickly under sparse alternatives. The proposed test statistic combines the power enhancement component with an asymptotically pivotal statistic, and strengthens the power under sparse alternatives. The null distribution does not require stringent regularity conditions, and is completely determined by that of the pivotal statistic. As specific applications, the proposed methods are applied to testing the factor pricing models and validating the cross-sectional independence in panel data models. PMID:26778846

Using High Resolution Remotely Sensed Data to Predict Territory Occupancy and Mircrorefugia for a Habitat Specialist, the American Pika (Ochotona princeps)

NASA Astrophysics Data System (ADS)

Beers, A.; Ray, C.

2015-12-01

Climate change is likely to affect mountainous areas unevenly due to the complex interactions between topography, vegetation, and the accumulation of snow and ice. This heterogeneity will complicate relationships between species presence and large-scale drivers such as precipitation and make predicting habitat extent and connectivity much more difficult. We studied the potential for fine-scale variation in climate and habitat use throughout the year in the American pika (Ochotona princeps), a talus specialist of mountainous western North America known for strong microhabitat affiliation. Not all areas of talus are likely to be equally hospitable, which may reduce connectivity more than predicted by large-scale occupancy drivers. We used high resolution remotely sensed data to create metrics of the terrain and land cover in the Niwot Ridge (NWT) LTER site in Colorado. We hypothesized that pikas preferentially use heterogeneous terrain, as it might foster greater snow accumulation, and used radio telemetry to test this with radio-collared pikas. Pikas use heterogeneous terrain during snow covered periods and less heterogeneous area during the summer. This suggests that not all areas of talus habitat are equally suitable as shelter from extreme conditions but that pikas need more than just shelter from winter cold. With those results we created a predictive map using the same habitat metrics to model the extent of suitable habitat across the NWT area. These strong effects of terrain on pika habitat use and territory occupancy show the great utility that high resolution remotely sensed data can have in ecological applications. With increasing effects of climate change in mountainous regions, this modeling approach is crucial for quantifying habitat connectivity at both small and large scales and to identify potential refugia for threatened or isolated species.

Fate and Transport of Cohesive Sediment and HCB in the Middle Elbe River Basin

NASA Astrophysics Data System (ADS)

Moshenberg, Kari; Heise, Susanne; Calmano, Wolfgang

2014-05-01

Chemical contamination of waterways and floodplains is a pervasive environmental problem that threatens aquatic ecosystems worldwide. Due to extensive historical contamination and redistribution of contaminated sediments throughout the basin, the Elbe River transports significant loads of contaminants downstream, particularly during flood events. This study focuses on Hexachlorobenzene (HCB), a persistent organic pollutant that has been identified as a contaminant of concern in the Elbe Basin. To better understand the fate and transport of cohesive sediments and sediment-sorbed HCB, a hydrodynamic, suspended sediment, and contaminated transport model for the 271-km reach of the Elbe River basin between Dresden and Magdeburg was developed. Additionally, trends in suspended sediment and contaminant transport were investigated in the context of the recent high frequency of floods in the Elbe Basin. This study presents strong evidence that extreme high water events, such as the August, 2002 floods, have a permanent effect on the sediment transport regime in the Elbe River. Additionally, results indicate that a significant component annual HCB loads are transported downstream during floods. Additionally, modeled results for suspended sediment and HCB accumulation on floodplains are presented and discussed. Uncertainty and issues related to model development are also addressed. A worst case analysis of HCB uptake by dairy cows and beef cattle indicate that significant, biologically relevant quantities of sediment-sorbed HCB accumulate on the Elbe floodplains following flood events. Given both the recent high frequency of floods in the Elbe Basin, and the potential increase in flood frequency due to climate change, an evaluation of source control measures and/or additional monitoring of floodplain soils and grasses is recommended.

Expression of Anthocyanins and Proanthocyanidins after Transformation of Alfalfa with Maize Lc12

PubMed Central

Ray, Heather; Yu, Min; Auser, Patricia; Blahut-Beatty, Laureen; McKersie, Brian; Bowley, Steve; Westcott, Neil; Coulman, Bruce; Lloyd, Alan; Gruber, Margaret Y.

2003-01-01

Three anthocyanin regulatory genes of maize (Zea mays; Lc, B-Peru, and C1) were introduced into alfalfa (Medicago sativa) in a strategy designed to stimulate the flavonoid pathway and alter the composition of flavonoids produced in forage. Lc constructs included a full-length gene and a gene with a shortened 5′-untranslated region. Lc RNA was strongly expressed in Lc transgenic alfalfa foliage, but accumulation of red-purple anthocyanin was observed only under conditions of high light intensity or low temperature. These stress conditions induced chalcone synthase and flavanone 3-hydroxylase expression in Lc transgenic alfalfa foliage compared with non-transformed plants. Genotypes containing the Lc transgene construct with a full-length 5′-untranslated region responded more quickly to stress conditions and with a more extreme phenotype. High-performance liquid chromatography analysis of field-grown tissue indicated that flavone content was reduced in forage of the Lc transgenic plants. Leucocyanidin reductase, the enzyme that controls entry of metabolites into the proanthocyanidin pathway, was activated both in foliage and in developing seeds of the Lc transgenic alfalfa genotypes. Proanthocyanidin polymer was accumulated in the forage, but (+)-catechin monomers were not detected. B-Peru transgenic and C1 transgenic populations displayed no visible phenotypic changes, although these transgenes were expressed at detectable levels. These results support the emerging picture of Lc transgene-specific patterns of expression in different recipient species. These results demonstrate that proanthocyanidin biosynthesis can be stimulated in alfalfa forage using an myc-like transgene, and they pave the way for the development of high quality, bloat-safe cultivars with ruminal protein bypass. PMID:12857826

Extremely Rapid Crystal Fractionation During Episodes 30-31 of the Pu`u O`o Eruption: Implications for Magma Chamber Processes

NASA Astrophysics Data System (ADS)

Garcia, M. O.; Rhodes, J. M.; Pietruszka, A. J.; Rose, W. I.

2002-12-01

The Pu`u O`o eruption offers excellent opportunities to examine petrologic and geochemical processes in shallow, basaltic magma chamber due to the intense, multi-disciplinary monitoring of its activity, frequent sampling and repeated eruptions at the same vent. Strong compositional variations were observed during some of the high fire-fountaining (400 m) episodes in 1985. Following a 20-30 day hiatus in eruptive activity, the shallow magma chamber was largely evacuated during brief (1-2 day) eruptions. Samples collected during these episodes, especially at the beginning and end, document the compositional variation between and during eruptive episodes. Lavas and tephra from episodes 30 and 31 showed a remarkable and systematic variation (2 wt% increase in MgO; 7% decrease in incompatible elements like Ba) during and between these episodes. Most of the intra-episode lava compositional variation was observed during a brief period (<2 hours) with little variation before or after. Olivines in these weakly prophyritic Pu`u O`o lavas are in equilibrium with the host rock composition indicating that compositional variation is not related to magma mixing or accumulation of olivine. We interpret the variation to reflect crystal fractionation within the shallow (tens to hundreds of meter deep) Pu`u O`o magma chamber. This extremely high rate of crystallization (up to 0.3%/day) and cooling (2°C/day), compared to estimates of 1°C/year for the rift zone interior, must reflect the high surface area of the dike-shaped and open topped magma chamber. These features may represent the tapping of a diffusive interface separating well mixed zones of hotter and more primitive magma in the lower part of the chamber from cooler, somewhat evolved magma above.

Association of Lipid Accumulation Product with Cardio-Metabolic Risk Factors in Postmenopausal Women.

PubMed

Namazi Shabestari, Alireza; Asadi, Mojgan; Jouyandeh, Zahra; Qorbani, Mostafa; Kelishadi, Roya

2016-06-01

The lipid accumulation product is a novel, safe and inexpensive index of central lipid over accumulation based on waist circumference and fasting concentration of circulating triglycerides. This study was designed to investigate the ability of lipid accumulation product to predict Cardio-metabolic risk factors in postmenopausal women. In this Cross-sectional study, 264 postmenopausal women by using convenience sampling method were selected from menopause clinic in Tehran. Cardio-metabolic risk factors were measured, and lipid accumulation product (waist-58×triglycerides [nmol/L]) was calculated. Optimal cut-off point of lipid accumulation product for predicting metabolic syndrome was estimated by ROC (Receiver-operating characteristic) curve analysis. Metabolic syndrome was diagnosed in 41.2% of subjects. Optimal cut-off point of lipid accumulation product for predicting metabolic syndrome was 47.63 (sensitivity:75%; specificity:77.9%). High lipid accumulation product increases risk of all Cardio-metabolic risk factors except overweight, high Total Cholesterol, high Low Density Lipoprotein Cholesterol and high Fasting Blood Sugar in postmenopausal women. Our findings show that lipid accumulation product is associated with metabolic syndrome and some Cardio-metabolic risk factors Also lipid accumulation product may have been a useful tool for predicting cardiovascular disease and metabolic syndrome risk in postmenopausal women.

Boron content and sources in Tertiary aquifers in the Sultanate of Oman

NASA Astrophysics Data System (ADS)

Moraetis, Daniel; Lamki, Mohamed Al; Muhammad, Dawood; Yaroubi, Saif; Batashi, Hamad Al; Pracejus, Bernhard

2017-04-01

The boron (B) content of relatively shallow groundwaters in arid areas is high due to extreme evaporation which precipitates several salts with subsequent boron accumulation originating from rocks dissolution and/or rainwater. In deeper aquifers, where there is no groundwater-surface connection, other sources of boron may affect the water quality. The present study investigates the boron origin observed in 197 wells completed within the units of Umm Er Radhuma (UeR), Rus, Dammam and Fars (from older to younger geological units) which all belong to the Tertiary units of the interior of Oman. The acquired chemical data include major ions (cations and anions), Rare Earth Elements (REE) along with B isotopes (10 and 11) and Sr isotopes (86 and 87). In addition, leaching tests were performed in selected samples to validate the release of B in distilled water. The water samples were grouped based on B concentration of less than 5 mg/l, 5 to 15 mg/l and extreme values of higher than 15 mg/l. The Fars and UeR groundwater samples showed the most extreme boron content (higher than 15 mg/l) yet the former is the shallower and younger unit and the latter is the deeper and older unit. The Fars water of high boron content (higher than 15 mg/l) shows very high content of magnesium and calcium as well as low concentration of Sr. Furthermore, the magnesium and calcium are also high in UeR, while Sr concentration is much higher in UeR compared to Fars. The UeR water with extreme boron content appears in the field of diagenetic water in a diagram of δ11BNIST951 [‰] versus 1/B, along with Sr isotopes ratio and europium (Eu) positive anomaly, while Fars waters appear in a mixing zone of marine water with infiltrated rainwater. The regression analysis of sodium and chloride showed that concentrations of boron up to 10 mg/l can be correlated to halite dissolution in infiltrated rainwater in all units. The laboratory leaching tests verified the rocks capability to release boron up to 7 mg/l with a low water/solid ratio (low porosity rocks). Thus, the lowest boron content (up to 5 mg/l) is correlated to the dissolution of minerals within the Tertiary units. Whilst the samples containing 5 to 15 mg/l of B could correspond to lower water to solid ratio aquifer and/or mixing of low and high boron waters (rainwater and diagenetic or marine water). Finally, B isotopes along the REE analysis are considered as better indices of groundwater origin compared to Sr isotopes ratio especially in the case of diagenetic water identification.

The Effects of Space-Charge on the Dynamics of the Ion Booster in the Jefferson Lab EIC (JLEIC)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bogacz, Alex; Nissen, Edward

Optimization of the booster synchrotron design to operate in the extreme space-charge dominated regime is proposed. This study is motivated by the ultra-high luminosity promised by the JLEIC accelerator complex, which poses several beam dynamics and lattice design challenges for its individual components. We examine the effects of space charge on the dynamics of the booster synchrotron for the proposed JLEIC electron ion collider. This booster will inject and accumulate protons and heavy ions at an energy of 280 MeV and then engage in a process of acceleration and electron cooling to bring it to its extraction energy of 8more » GeV. This would then be sent into the ion collider ring part of JLEIC. In order to examine the effects of space charge on the dynamics of this process we use the software SYNERGIA.« less

Tropical to mid-latitude snow and ice accumulation, flow and glaciation on Mars

USGS Publications Warehouse

Head, J.W.; Neukum, G.; Jaumann, R.; Hiesinger, H.; Hauber, E.; Carr, M.; Masson, P.; Foing, B.; Hoffmann, H.; Kreslavsky, M.; Werner, S.; Milkovich, S.; Van Gasselt, S.

2005-01-01

Images from the Mars Express HRSC (High-Resolution Stereo Camera) of debris aprons at the base of massifs in eastern Hellas reveal numerous concentrically ridged lobate and pitted features and related evidence of extremely ice-rich glacier-like viscous flow and sublimation. Together with new evidence for recent ice-rich rock glaciers at the base of the Olympus Mons scarp superposed on larger Late Amazonian debris-covered piedmont glaciers, we interpret these deposits as evidence for geologically recent and recurring glacial activity in tropical and mid-latitude regions of Mars during periods of increased spin-axis obliquity when polar ice was mobilized and redeposited in microenvironments at lower latitudes. The data indicate that abundant residual ice probably remains in these deposits and that these records of geologically recent climate changes are accessible to future automated and human surface exploration.

Tropical to mid-latitude snow and ice accumulation, flow and glaciation on Mars.

PubMed

Head, J W; Neukum, G; Jaumann, R; Hiesinger, H; Hauber, E; Carr, M; Masson, P; Foing, B; Hoffmann, H; Kreslavsky, M; Werner, S; Milkovich, S; van Gasselt, S

2005-03-17

Images from the Mars Express HRSC (High-Resolution Stereo Camera) of debris aprons at the base of massifs in eastern Hellas reveal numerous concentrically ridged lobate and pitted features and related evidence of extremely ice-rich glacier-like viscous flow and sublimation. Together with new evidence for recent ice-rich rock glaciers at the base of the Olympus Mons scarp superposed on larger Late Amazonian debris-covered piedmont glaciers, we interpret these deposits as evidence for geologically recent and recurring glacial activity in tropical and mid-latitude regions of Mars during periods of increased spin-axis obliquity when polar ice was mobilized and redeposited in microenvironments at lower latitudes. The data indicate that abundant residual ice probably remains in these deposits and that these records of geologically recent climate changes are accessible to future automated and human surface exploration.

Master Plan Jakarta, Indonesia: The Giant Seawall and the need for structural treatment of municipal waste water.

PubMed

van der Wulp, Simon A; Dsikowitzky, Larissa; Hesse, Karl Jürgen; Schwarzbauer, Jan

2016-09-30

In order to take actions against the annual flooding in Jakarta, the construction of a Giant Seawall has been proposed in the Master Plan for National Capital Integrated Coastal Development. The seawall provides a combination of technical solutions against flooding, but these will heavily modify the mass transports in the near-coastal area of Jakarta Bay. This study presents numerical simulations of river flux of total nitrogen and N,N-diethyl-m-toluamide, a molecular tracer for municipal waste water for similar scenarios as described in the Master Plan. Model results demonstrate a strong accumulation of municipal wastes and nutrients in the planned reservoirs to extremely high levels which will result in drastic adverse eutrophication effects if the treatment of municipal waste water is not dealt with in the same priority as the construction of the Giant Seawall. Copyright © 2016 Elsevier Ltd. All rights reserved.

Adaptation in very old age: exploring the role of resources, beliefs, and attitudes for centenarians' happiness.

PubMed

Jopp, Daniela; Rott, Christoph

2006-06-01

When individuals reach very old age, accumulating negative conditions represent a serious challenge to their capacity to adapt and are likely to reduce the quality of life. By examining happiness and its determinants in centenarians, this study investigated the proposal that psychological resilience may come to an end in extremely old age. Data from the population-based Heidelberg Centenarian Study indicated high levels of happiness. Basic resources (i.e., job training, cognition, health, social network, extraversion) explained a substantial proportion of variance in happiness, but some resource effects were mediated through self-referent beliefs (e.g., self-efficacy) and attitudes toward life (e.g., optimistic outlook). Results challenge the view that psychological resilience reaches a critical limit or that the self-regulatory adaptation system loses its efficiency in very advanced age. Copyright (c) 2006 APA, all rights reserved.

16-year Climatology of Cold-Season Extreme Precipitation-Drought Statistics derived from NLDAS Precipitation Data Over the Conterminous U.S.

NASA Astrophysics Data System (ADS)

Matsui, T.; Mocko, D. M.

2015-12-01

We examine radar-gauge merged 1/8-degree hourly precipitation data from the North American Land Data Assimilation System (NLDAS) Phase-II datasets from 1997 to 2013. For each 1/8 grid, we derived statistics of single-event storm duration, total accumulated precipitation, and dry period between each storm events during cold (Oct-Mar) seasons, and histogram of event-by-event statistics are used to estimate the thresholds for extreme (below-1%) and very extreme (below-0.1%) events. In this way, we constructed unique climatology maps of the extreme precipitation-drought frequencies and probability density functions. This climatology map depicted that cold-season extremely heavy precipitation events are populated over West Coast, Deep South, and coastal zone of North East, suggesting impacts of land-falling maritime storm systems. Simultaneously, datasets depicts that long-extended precipitation events are mostly populated over North West, and lower Mississippi Basin up to North East centered at Appalachian Mountains, resembling east Pacific storm tracks and nor'easter storm tracks, respectively. Furthermore, season-by-season statistics of these extreme events were examined for each National Climate Assessment (NCA) regimes in comparison with a number of major atmospheric oscillations and teleconnection patterns as well as Arctic Amplifications. Index of Arctic Amplification includes variability of 500mb zonal wind speed and pole-to-midlatitude differences in atmospheric thickness, linking to the phase speed of the Rossby wave. Finally, we present ensemble correlations scores, and discuss the physical processes and underlying mechanisms for their key characteristics as well as the predictive skill and predictability of the extreme events from sub-seasonal to interannual scales during cold seasons.

Upper extremity sensorimotor control among collegiate football players.

PubMed

Laudner, Kevin G

2012-03-01

Injuries stemming from shoulder instability are very common among athletes participating in contact sports, such as football. Previous research has shown that increased laxity negatively affects the function of the sensorimotor system potentially leading to a pathological cycle of shoulder dysfunction. Currently, there are no data detailing such effects among football players. Therefore, the purpose of this study was to examine the differences in upper extremity sensorimotor control among football players compared with that of a control group. Forty-five collegiate football players and 70 male control subjects with no previous experience in contact sports participated. All the subjects had no recent history of upper extremity injury. Each subject performed three 30-second upper extremity balance trials on each arm. The balance trials were conducted in a single-arm push-up position with the test arm in the center of a force platform and the subjects' feet on a labile device. The trials were averaged, and the differences in radial area deviation between groups were analyzed using separate 1-way analyses of variance (p < 0.05). The football players showed significantly more radial area deviation of the dominant (0.41 ± 1.23 cm2, p = 0.02) and nondominant arms (0.47 ± 1.63 cm2, p = 0.03) when compared with the control group. These results suggest that football players may have decreased sensorimotor control of the upper extremity compared with individuals with no contact sport experience. The decreased upper extremity sensorimotor control among the football players may be because of the frequent impacts accumulated during football participation. Football players may benefit from exercises that target the sensorimotor system. These findings may also be beneficial in the evaluation and treatment of various upper extremity injuries among football players.

Characterization of halophilic C50 carotenoid-producing archaea isolated from solar saltworks in Bohai Bay, China

NASA Astrophysics Data System (ADS)

Sui, Liying; Liu, Liangsen; Deng, Yuangao

2014-11-01

Halophilic archaea comprise the majority of microorganisms found in hypersaline environments. C50 carotenoids accumulated in archaea cells are considered potential biotechnological products and possess a number of biological functions. Ten red colonies were isolated from brine water in a saltern crystallizer pond of the Hangu Saltworks, China. 16S rRNA gene sequence analysis showed that the colonies belonged to the extremely halophilic archaea genera Halobacterium and Halorubrum. Two representative strains, Halobacterium strain SP-2 and Halorubrum strain SP-4, were selected for further study on the phenotypic characteristics and effects of salinity and pH on accumulation and composition of pigments in their cells. The archaeal strains were isolated and grown in a culture medium prepared by dissolving yeast extract (10 g/L) and acid-hydrolyzed casein (7.5 g/L) into brine water obtained from a local salt pond. Their optimum salinity and pH for growth were 250 and 7, respectively, although pigment accumulation (OD490 / mL broth) was highest at pH 8. In addition, at 150-300 salinity, increasing salinity resulted in decreasing pigment accumulation. Analysis of the UV-Vis spectrum, TLC and HLPC chromatograms showed that C50 carotenoid bacterioruberin is the major pigment in both strains.

DELLAs Regulate Chlorophyll and Carotenoid Biosynthesis to Prevent Photooxidative Damage during Seedling Deetiolation in Arabidopsis[C][W

PubMed Central

Cheminant, Soizic; Wild, Michael; Bouvier, Florence; Pelletier, Sandra; Renou, Jean-Pierre; Erhardt, Mathieu; Hayes, Scott; Terry, Matthew J.; Genschik, Pascal; Achard, Patrick

2011-01-01

In plants, light represents an important environmental signal that triggers the production of photosynthetically active chloroplasts. This developmental switch is critical for plant survival because chlorophyll precursors that accumulate in darkness can be extremely destructive when illuminated. Thus, plants have evolved mechanisms to adaptively control plastid development during the transition into light. Here, we report that the gibberellin (GA)-regulated DELLA proteins play a crucial role in the formation of functional chloroplasts during deetiolation. We show that Arabidopsis thaliana DELLAs accumulating in etiolated cotyledons derepress chlorophyll and carotenoid biosynthetic pathways in the dark by repressing the transcriptional activity of the phytochrome-interacting factor proteins. Accordingly, dark-grown GA-deficient ga1-3 mutants (that accumulate DELLAs) display a similar gene expression pattern to wild-type seedlings grown in the light. Consistent with this, ga1-3 seedlings accumulate higher amounts of protochlorophyllide (a phototoxic chlorophyll precursor) in darkness but, surprisingly, are substantially more resistant to photooxidative damage following transfer into light. This is due to the DELLA-dependent upregulation of the photoprotective enzyme protochlorophyllide oxidoreductase (POR) in the dark. Our results emphasize the role of DELLAs in regulating the levels of POR, protochlorophyllide, and carotenoids in the dark and in protecting etiolated seedlings against photooxidative damage during initial light exposure. PMID:21571951

Heavy metal bioaccumulation in Great Basin submersed aquatic macrophytes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lytle, C.M.

1994-01-01

Seasonal element cycling and nutritional quality were determined in sago pondweed plant tissue. Leaf protein was 27% in July and 15% in December. Sago drupelet protein content was 9% in July and 6.5% in October. Sago plant tissue mineral, trace metal and non-structural carbohydrate content were high in the Fall. Submersed aquatic plant species from the Provo River drainage, Bear River MBR and Utah Lake - Provo Bay were significantly higher in heavy metals than aquatic species from remote wetlands. Extreme sodium concentrations were found in water, sediment and plant tissue in Ibis and Harrison pools (Fish Springs NWR). Boron,more » arsenic and selenium concentrations in plant tissue were much lower than those at Kesterson Reservoir, California. Submersed aquatic plants may act as channels that expedite the trophic movement of metal ions. The chemical structure of accumulated manganese and iron in sago pondweed plant tissue differed with time of year. June plant tissue manganese was fully hydrated. Accumulated manganese in October plant tissue was a Mn(II)Mn(III) mineral oxide. Accumulated iron was Fe(III) in both leaf and root tissue. Methylmercury was toxic to Lesser duckweed at very low doses (>0.1 [mu]g ml[sup [minus]1]). Increased pH improved frond survival in organic and inorganic mercury solutions. Duckweed should be considered as a sensitive phytoassay of methylmercury toxicity. Soil manganese and lead concentrations are correlated with distance from the roadway and traffic volume. Soil lead concentrations have moved deeper into the profile. Roadside aquatic plants were higher in manganese than herbaceous plants and grasses. Roadside snow and water were low in manganese and lead. Roadside soil and plants were apparently contaminated by Mn oxides from motor vehicle exhaust.« less

Discovery of a resting stage in the harmful, brown-tide-causing pelagophyte, Aureoumbra lagunensis: a mechanism potentially facilitating recurrent blooms and geographic expansion.

PubMed

Kang, Yoonja; Tang, Ying-Zhong; Taylor, Gordon T; Gobler, Christopher J

2017-02-01

To date, the life stages of pelagophytes have been poorly described. This study describes the ability of Aureoumbra lagunensis to enter a resting stage in response to environmental stressors including high temperature, nutrient depletion, and darkness as well as their ability to revert from resting cells back to vegetative cells after exposure to optimal light, temperature, and nutrient conditions. Resting cells became round in shape and larger in size, filled with red accumulation bodies, had smaller and fewer plastids, more vacuolar space, contained lower concentrations of chl a and RNA, displayed reduced photosynthetic efficiency, and lower respiration rates relative to vegetative cells. Analysis of vegetative and resting cells using Raman microspectrometry indicated resting cells were enriched in sterols within red accumulation bodies and were depleted in pigments relative to vegetative cells. Upon reverting to vegetative cells, cells increased their chl a content, photosynthetic efficiency, respiration rate, and growth rate and lost accumulation bodies as they became smaller. The time required for resting cells to resume vegetative growth was proportional to both the duration and temperature of dark storage, possibly due to higher metabolic demands on stored energy (sterols) reserves during longer period of storage and/or storage at higher temperature (20°C vs. 10°C). Resting cells kept in the dark at 10°C for 7 months readily reverted back to vegetative cells when transferred to optimal conditions. Thus, the ability of Aureoumbra to form a resting stage likely enables them to form annual blooms within subtropic ecosystems, resist temperature extremes, and may facilitate geographic expansion via anthropogenic transport. © 2016 Phycological Society of America.

Cytochrome P450 CYP71BE5 in grapevine (Vitis vinifera) catalyzes the formation of the spicy aroma compound (−)-rotundone

PubMed Central

Takase, Hideki; Sasaki, Kanako; Shinmori, Hideyuki; Shinohara, Akira; Mochizuki, Chihiro; Kobayashi, Hironori; Ikoma, Gen; Saito, Hiroshi; Matsuo, Hironori; Suzuki, Shunji; Takata, Ryoji

2016-01-01

(−)-Rotundone is a potent odorant molecule with a characteristic spicy aroma existing in various plants including grapevines (Vitis vinifera). It is considered to be a significant compound in wines and grapes because of its low sensory threshold and aroma properties. (−)-Rotundone was first identified in red wine made from the grape cultivar Syrah and here we report the identification of VvSTO2 as a α-guaiene 2-oxidase which can transform α-guaiene to (−)-rotundone in the grape cultivar Syrah. It is a cytochrome P450 (CYP) enzyme belonging to the CYP 71BE subfamily, which overlaps with the very large CYP71D family and, to the best of our knowledge, this is the first functional characterization of an enzyme from this family. VvSTO2 was expressed at a higher level in the Syrah grape exocarp (skin) in accord with the localization of (−)-rotundone accumulation in grape berries. α-Guaiene was also detected in the Syrah grape exocarp at an extremely high concentration. These findings suggest that (−)-rotundone accumulation is regulated by the VvSTO2 expression along with the availability of α-guaiene as a precursor. VvSTO2 expression during grape maturation was considerably higher in Syrah grape exocarp compared to Merlot grape exocarp, consistent with the patterns of α-guaiene and (−)-rotundone accumulation. On the basis of these findings, we propose that VvSTO2 may be a key enzyme in the biosynthesis of (−)-rotundone in grapevines by acting as a α-guaiene 2-oxidase. PMID:26590863

A Role for the Liver in Parturition and Preterm Birth.

PubMed

Mawson, Anthony R

Neither the mechanisms of parturition nor the pathogenesis of preterm birth are well understood. Poor nutritional status has been suspected as a major causal factor, since vitamin A concentrations are low in preterm infants. However, even large enteral doses of vitamin A from birth fail to increase plasma concentrations of vitamin A or improve outcomes in preterm and/or extremely low birthweight infants. These findings suggest an underlying impairment in the secretion of vitamin A from the liver, where about 80% of the vitamin is stored. Vitamin A accumulates in the liver and breast during pregnancy in preparation for lactation. While essential in low concentration for multiple biological functions, vitamin A in higher concentration can be pro-oxidant, mutagenic, teratogenic and cytotoxic, acting as a highly surface-active, membrane-seeking and destabilizing compound. Regarding the mechanism of parturition, it is conjectured that by nine months of gestation the hepatic accumulation of vitamin A (retinol) from the liver is such that mobilization and secretion are impaired to the point where stored vitamin A compounds in the form of retinyl esters and retinoic acid begin to spill or leak into the circulation, resulting in amniotic membrane destabilization and the initiation of parturition. If, however, the accumulation and spillage of stored retinoids reaches a critical threshold prior to nine months, e.g., due to cholestatic liver disease, which is common in mothers of preterm infants, the increased retinyl esters and/or retinoic acid rupture the fetal membranes, inducing preterm birth and its complications, including retinopathy, necrotizing enterocolitis and bronchopulmonary dysplasia. Subject to testing, the model suggests that measures taken prior to and during pregnancy to improve liver function could reduce the risk of adverse birth outcomes, including preterm birth.

A Role for the Liver in Parturition and Preterm Birth

PubMed Central

Mawson, Anthony R.

2016-01-01

Neither the mechanisms of parturition nor the pathogenesis of preterm birth are well understood. Poor nutritional status has been suspected as a major causal factor, since vitamin A concentrations are low in preterm infants. However, even large enteral doses of vitamin A from birth fail to increase plasma concentrations of vitamin A or improve outcomes in preterm and/or extremely low birthweight infants. These findings suggest an underlying impairment in the secretion of vitamin A from the liver, where about 80% of the vitamin is stored. Vitamin A accumulates in the liver and breast during pregnancy in preparation for lactation. While essential in low concentration for multiple biological functions, vitamin A in higher concentration can be pro-oxidant, mutagenic, teratogenic and cytotoxic, acting as a highly surface-active, membrane-seeking and destabilizing compound. Regarding the mechanism of parturition, it is conjectured that by nine months of gestation the hepatic accumulation of vitamin A (retinol) from the liver is such that mobilization and secretion are impaired to the point where stored vitamin A compounds in the form of retinyl esters and retinoic acid begin to spill or leak into the circulation, resulting in amniotic membrane destabilization and the initiation of parturition. If, however, the accumulation and spillage of stored retinoids reaches a critical threshold prior to nine months, e.g., due to cholestatic liver disease, which is common in mothers of preterm infants, the increased retinyl esters and/or retinoic acid rupture the fetal membranes, inducing preterm birth and its complications, including retinopathy, necrotizing enterocolitis and bronchopulmonary dysplasia. Subject to testing, the model suggests that measures taken prior to and during pregnancy to improve liver function could reduce the risk of adverse birth outcomes, including preterm birth. PMID:27595011

Cytochrome P450 CYP71BE5 in grapevine (Vitis vinifera) catalyzes the formation of the spicy aroma compound (-)-rotundone.

PubMed

Takase, Hideki; Sasaki, Kanako; Shinmori, Hideyuki; Shinohara, Akira; Mochizuki, Chihiro; Kobayashi, Hironori; Ikoma, Gen; Saito, Hiroshi; Matsuo, Hironori; Suzuki, Shunji; Takata, Ryoji

2016-02-01

(-)-Rotundone is a potent odorant molecule with a characteristic spicy aroma existing in various plants including grapevines (Vitis vinifera). It is considered to be a significant compound in wines and grapes because of its low sensory threshold and aroma properties. (-)-Rotundone was first identified in red wine made from the grape cultivar Syrah and here we report the identification of VvSTO2 as a α-guaiene 2-oxidase which can transform α-guaiene to (-)-rotundone in the grape cultivar Syrah. It is a cytochrome P450 (CYP) enzyme belonging to the CYP 71BE subfamily, which overlaps with the very large CYP71D family and, to the best of our knowledge, this is the first functional characterization of an enzyme from this family. VvSTO2 was expressed at a higher level in the Syrah grape exocarp (skin) in accord with the localization of (-)-rotundone accumulation in grape berries. α-Guaiene was also detected in the Syrah grape exocarp at an extremely high concentration. These findings suggest that (-)-rotundone accumulation is regulated by the VvSTO2 expression along with the availability of α-guaiene as a precursor. VvSTO2 expression during grape maturation was considerably higher in Syrah grape exocarp compared to Merlot grape exocarp, consistent with the patterns of α-guaiene and (-)-rotundone accumulation. On the basis of these findings, we propose that VvSTO2 may be a key enzyme in the biosynthesis of (-)-rotundone in grapevines by acting as a α-guaiene 2-oxidase. © The Author 2015. Published by Oxford University Press on behalf of the Society for Experimental Biology.

The influence of intra- and inter-annual meteorological variability on dengue transmission: a multi-level modeling analysis

NASA Astrophysics Data System (ADS)

Wen, Tzai-Hung; Chen, Tzu-Hsin

2017-04-01

Dengue fever is one of potentially life-threatening mosquito-borne diseases and IPCC Fifth Assessment Report (AR5) has confirmed that dengue incidence is sensitive to the critical weather conditions, such as effects of temperature. However, previous literature focused on the effects of monthly or weekly average temperature or accumulative precipitation on dengue incidence. The influence of intra- and inter-annual meteorological variability on dengue outbreak is under investigated. The purpose of the study focuses on measuring the effect of the intra- and inter-annual variations of temperature and precipitation on dengue outbreaks. We developed the indices of intra-annual temperature variability are maximum continuity, intermittent, and accumulation of most suitable temperature (MST) for dengue vectors; and also the indices of intra-annual precipitation variability, including the measure of continuity of wetness or dryness during a pre-epidemic period; and rainfall intensity during an epidemic period. We used multi-level modeling to investigate the intra- and inter-annual meteorological variations on dengue outbreaks in southern Taiwan from 1998-2015. Our results indicate that accumulation and maximum continuity of MST are more significant than average temperature on dengue outbreaks. The effect of continuity of wetness during the pre-epidemic period is significantly more positive on promoting dengue outbreaks than the rainfall effect during the epidemic period. Meanwhile, extremely high or low rainfall density during an epidemic period do not promote the spread of dengue epidemics. Our study differentiates the effects of intra- and inter-annual meteorological variations on dengue outbreaks and also provides policy implications for further dengue control under the threats of climate change. Keywords: dengue fever, meteorological variations, multi-level model

Predicting therapeutic nanomedicine efficacy using a companion magnetic resonance imaging nanoparticle.

PubMed

Miller, Miles A; Gadde, Suresh; Pfirschke, Christina; Engblom, Camilla; Sprachman, Melissa M; Kohler, Rainer H; Yang, Katherine S; Laughney, Ashley M; Wojtkiewicz, Gregory; Kamaly, Nazila; Bhonagiri, Sushma; Pittet, Mikael J; Farokhzad, Omid C; Weissleder, Ralph

2015-11-18

Therapeutic nanoparticles (TNPs) have shown heterogeneous responses in human clinical trials, raising questions of whether imaging should be used to identify patients with a higher likelihood of NP accumulation and thus therapeutic response. Despite extensive debate about the enhanced permeability and retention (EPR) effect in tumors, it is increasingly clear that EPR is extremely variable; yet, little experimental data exist to predict the clinical utility of EPR and its influence on TNP efficacy. We hypothesized that a 30-nm magnetic NP (MNP) in clinical use could predict colocalization of TNPs by magnetic resonance imaging (MRI). To this end, we performed single-cell resolution imaging of fluorescently labeled MNPs and TNPs and studied their intratumoral distribution in mice. MNPs circulated in the tumor microvasculature and demonstrated sustained uptake into cells of the tumor microenvironment within minutes. MNPs could predictably demonstrate areas of colocalization for a model TNP, poly(d,l-lactic-co-glycolic acid)-b-polyethylene glycol (PLGA-PEG), within the tumor microenvironment with >85% accuracy and circulating within the microvasculature with >95% accuracy, despite their markedly different sizes and compositions. Computational analysis of NP transport enabled predictive modeling of TNP distribution based on imaging data and identified key parameters governing intratumoral NP accumulation and macrophage uptake. Finally, MRI accurately predicted initial treatment response and drug accumulation in a preclinical efficacy study using a paclitaxel-encapsulated NP in tumor-bearing mice. These approaches yield valuable insight into the in vivo kinetics of NP distribution and suggest that clinically relevant imaging modalities and agents can be used to select patients with high EPR for treatment with TNPs. Copyright © 2015, American Association for the Advancement of Science.

Ecosystem Services and Potential Utilization of of Urban Typha angustifolia Wetlands of across Metropolitan Bangkok, Thailand

NASA Astrophysics Data System (ADS)

Sritrairat, S.

2014-12-01

Over half the world's 7.2 billion population are living in urban habitats. While these cities only occupy 2% of the world's surface, the ecological footprint by these cities combined is far greater than that of the other 98% of the world. Bangkok, Thailand has experienced this rapid urbanization that has resulted in various environmental problems, including pollution, land subsidence, and flooding. Major flooding in 2011 has raised awareness about the importance of restoring ecosystem services in urban space to cope up with the forecasted extreme climatic conditions. Finding localized flooding, carbon and pollution mitigation methods will be important to cities. Upland reforestration has been proposed as a way to decrease these anthropogenic and climate change impacts. However, there is also a large area of wetlands in Bangkok with possibly high ecosystem services that have not been quantified. This study measure above ground and below ground carbon accumulation in wide-spread Typha angustifolia wetlands as an untapped source of ecosystem services that are worth projected. These wetlands are typically viewed as wasteland and are not being protected. We examined carbon and heavy metals (Pb, Zn, Cu) pools in 7 wetlands across Bangkok with various environmental settings--from industrialized zone, to residential area, farms, and protected urban green space. The results indicate recent peat accumulation layer by these wetlands at high rate. Heavy concentration are found near contaminant source such as industries and farms. Combined with their ability to buffer storms and being habitats for wildlife, these wetlands have important values in increasing ecosystem services in urban space and should be considered for protection.

Climate Change: A New Metric to Measure Changes in the Frequency of Extreme Temperatures using Record Data

NASA Technical Reports Server (NTRS)

Munasinghe, L.; Jun, T.; Rind, D. H.

2012-01-01

Consensus on global warming is the result of multiple and varying lines of evidence, and one key ramification is the increase in frequency of extreme climate events including record high temperatures. Here we develop a metric- called "record equivalent draws" (RED)-based on record high (low) temperature observations, and show that changes in RED approximate changes in the likelihood of extreme high (low) temperatures. Since we also show that this metric is independent of the specifics of the underlying temperature distributions, RED estimates can be aggregated across different climates to provide a genuinely global assessment of climate change. Using data on monthly average temperatures across the global landmass we find that the frequency of extreme high temperatures increased 10-fold between the first three decades of the last century (1900-1929) and the most recent decade (1999-2008). A more disaggregated analysis shows that the increase in frequency of extreme high temperatures is greater in the tropics than in higher latitudes, a pattern that is not indicated by changes in mean temperature. Our RED estimates also suggest concurrent increases in the frequency of both extreme high and extreme low temperatures during 2002-2008, a period when we observe a plateauing of global mean temperature. Using daily extreme temperature observations, we find that the frequency of extreme high temperatures is greater in the daily minimum temperature time-series compared to the daily maximum temperature time-series. There is no such observable difference in the frequency of extreme low temperatures between the daily minimum and daily maximum.

Extremely rapid directional change during Matuyama-Brunhes geomagnetic polarity reversal

NASA Astrophysics Data System (ADS)

Sagnotti, Leonardo; Scardia, Giancarlo; Giaccio, Biagio; Liddicoat, Joseph C.; Nomade, Sebastien; Renne, Paul R.; Sprain, Courtney J.

2014-11-01

We report a palaeomagnetic investigation of the last full geomagnetic field reversal, the Matuyama-Brunhes (M-B) transition, as preserved in a continuous sequence of exposed lacustrine sediments in the Apennines of Central Italy. The palaeomagnetic record provides the most direct evidence for the tempo of transitional field behaviour yet obtained for the M-B transition. 40Ar/39Ar dating of tephra layers bracketing the M-B transition provides high-accuracy age constraints and indicates a mean sediment accumulation rate of about 0.2 mm yr-1 during the transition. Two relative palaeointensity (RPI) minima are present in the M-B transition. During the terminus of the upper RPI minimum, a directional change of about 180 ° occurred at an extremely fast rate, estimated to be less than 2 ° per year, with no intermediate virtual geomagnetic poles (VGPs) documented during the transit from the southern to northern hemisphere. Thus, the entry into the Brunhes Normal Chron as represented by the palaeomagnetic directions and VGPs developed in a time interval comparable to the duration of an average human life, which is an order of magnitude more rapid than suggested by current models. The reported investigation therefore provides high-resolution integrated palaeomagnetic and radioisotopic data that document the fine details of the anatomy and tempo of the M-B transition in Central Italy that in turn are crucial for a better understanding of Earth's magnetic field, and for the development of more sophisticated models that are able to describe its global structure and behaviour.

Lead in tissues of mallard ducks dosed with two types of lead shot

USGS Publications Warehouse

Finley, M.T.; Dieter, M.P.; Locke, L.N.

1976-01-01

Mallard ducks (Anas platyrhynchos) were sacrificed one month after ingesting one number 4 all-lead shot or one number 4 lead-iron shot. Livers, kidneys, blood, wingbones, and eggs were analyzed for lead by atomic absorption. Necropsy of sacrificed ducks failed to reveal any of the tissue lesions usually associated with lead poisoning in waterfowl. Lead levels in ducks given all-lead shot averaged about twice those in ducks given lead-iron shot, reflecting the amount of lead in the two types of shot. Lead in the blood of ducks dosed with all-lead shot averaged 0.64 ppm, and 0.28 ppm in ducks given lead-iron shot. Lead residues in livers and kidneys of females given all-lead shot were significantly higher than in males. In both dosed groups, lead levels in wingbones of females were about 10 times those in males, and were significantly correlated with the number of eggs laid after dosage. Lead levels in contents and shells of eggs laid by hens dosed with all-lead shot were about twice those in eggs laid by hens dosed with lead-iron shot. Eggshells were found to best reflect levels of lead in the blood. Our results indicate that mallards maintained on a balanced diet and dosed with one lead shot may not accumulate extremely high lead levels in the liver and kidney. However, extremely high lead deposition may result in the bone of laying hens after ingesting sublethal amounts of lead shot as a result of mobilization of calcium from the bone during eggshell formation.

Proline accumulation in baker's yeast enhances high-sucrose stress tolerance and fermentation ability in sweet dough.

PubMed

Sasano, Yu; Haitani, Yutaka; Ohtsu, Iwao; Shima, Jun; Takagi, Hiroshi

2012-01-03

During bread-making processes, yeast cells are exposed to various baking-associated stresses. High-sucrose concentrations exert severe osmotic stress that seriously damages cellular components by generation of reactive oxygen species (ROS). Previously, we found that the accumulation of proline conferred freeze-thaw stress tolerance and the baker's yeast strain that accumulated proline retained higher-level fermentation abilities in frozen doughs than the wild-type strain. In this study, we constructed self-cloning diploid baker's yeast strains that accumulate proline. These resultant strains showed higher cell viability and lower intracellular oxidation levels than that observed in the wild-type strain under high-sucrose stress condition. Proline accumulation also enhanced the fermentation ability in high-sucrose-containing dough. These results demonstrate the usefulness of proline-accumulating baker's yeast for sweet dough baking. Copyright © 2011 Elsevier B.V. All rights reserved.

Thiazole derivative-modified upconversion nanoparticles for Hg2+ detection in living cells

NASA Astrophysics Data System (ADS)

Gu, Bin; Zhou, Yi; Zhang, Xiao; Liu, Xiaowang; Zhang, Yuhai; Marks, Robert; Zhang, Hua; Liu, Xiaogang; Zhang, Qichun

2015-12-01

Mercury ion (Hg2+) is an extremely toxic ion, which will accumulate in human bodies and cause severe nervous system damage. Therefore, the sensitive and efficient monitoring of Hg2+ in human bodies is of great importance. Upconversion nanoparticle (UCNPs) based nano probes exhibit no autofluorescence, deep penetration depth and chemical stability in biological samples, as well as a large anti-stokes shift. In this study, we have developed thiazole-derivative-functionalized UCNPs, and employed an upconversion emission intensity ratio of 540 nm to 803 nm (I540/I803) as a ratiometric signal to detect Hg2+ in living cells showing excellent photo stability and high selectivity. Our nano probe was characterized using transmission electron microscopy (TEM) and powder X-ray diffraction (PXRD). The low cytotoxicity of our probe was confirmed by an MTT assay and the UCL test in HeLa cells was carried out by confocal microscopy. Our results demonstrated that organic-dye-functionalized UCNPs should be a good strategy for detecting toxic metal ions when studying cellular biosystems.Mercury ion (Hg2+) is an extremely toxic ion, which will accumulate in human bodies and cause severe nervous system damage. Therefore, the sensitive and efficient monitoring of Hg2+ in human bodies is of great importance. Upconversion nanoparticle (UCNPs) based nano probes exhibit no autofluorescence, deep penetration depth and chemical stability in biological samples, as well as a large anti-stokes shift. In this study, we have developed thiazole-derivative-functionalized UCNPs, and employed an upconversion emission intensity ratio of 540 nm to 803 nm (I540/I803) as a ratiometric signal to detect Hg2+ in living cells showing excellent photo stability and high selectivity. Our nano probe was characterized using transmission electron microscopy (TEM) and powder X-ray diffraction (PXRD). The low cytotoxicity of our probe was confirmed by an MTT assay and the UCL test in HeLa cells was carried out by confocal microscopy. Our results demonstrated that organic-dye-functionalized UCNPs should be a good strategy for detecting toxic metal ions when studying cellular biosystems. Electronic supplementary information (ESI) available: NMR, MALDI-TOF MS spectra, etc. See DOI: 10.1039/c5nr05286f

How morphometric characteristics affect flow accumulation values

NASA Astrophysics Data System (ADS)

Farek, Vladimir

2014-05-01

Remote sensing methods (like aerial based LIDAR recording, land-use recording etc.) become continually more available and accurate. On the other hand in-situ surveying is still expensive. Above all in small, anthropogenically uninfluenced catchments, with poor, or non-existing surveying network could be remote sensing methods extremely useful. Overland flow accumulation (FA) values belong to important indicators of higher flash floods or soil erosion exposure. This value gives the number of cells of the Digital Elevation Model (DEM) grid, which are drained to each point of the catchment. This contribution deals with relations between basic geomorphological and morphometric characteristics (like hypsometric integral, Melton index of subcatchment etc.) and FA values. These relations are studied in the rocky sandstone landscapes of National park Ceské Svycarsko with the particular occurrence of broken relief. All calculations are based on high-resolution LIDAR DEM named Genesis created by TU Dresden. The main computational platform is GIS GRASS . The goal of the conference paper is to submit a quick method or indicators to estimate small particular subcatchments threatened by higher flash floods or soil erosion risks, without the necessity of using sophisticated rainfall-runoff models. There is a possibility to split catchments easily to small subcatchments (or use existing disjunction), compute basic characteristics and (with knowledge of links between this characteristics and FA values) identify, which particular subcatchment is potentially threatened by flash floods or soil erosion.

Strategy of metabolic phenotype modulation in Portunus trituberculatus exposed to low salinity.

PubMed

Ye, Yangfang; An, Yanpeng; Li, Ronghua; Mu, Changkao; Wang, Chunlin

2014-04-16

Extreme low salinity influences normal crab growth, morphogenesis, and production. Some individuals of swimming crab Portunus trituberculatus have, however, an inherent ability to adapt to such a salinity fluctuation. This study investigated the dynamic metabolite alterations of two P. trituberculatus strains, namely, a wild one and a screened (low-salinity tolerant) one in response to low-salinity challenge by combined use of NMR spectroscopy and high-throughput data analysis. The dominant metabolites in crab muscle were found to comprise amino acids, sugars, carboxylic acids, betaine, trimethylamine-N-oxide, 2-pyridinemethanol, trigonelline, and nucleotides. These results further showed that the strategy of metabolic modulation of P. trituberculatus after low-salinity stimulus includes osmotic rebalancing, enhanced gluconeogenesis from amino acids, and energy accumulation. These metabolic adaptations were manifested in the accumulation of trimethylamine-N-oxide, ATP, 2-pyridinemethanol, and trigonelline and in the depletion of the amino acid pool as well as in the fluctuation of inosine levels. This lends support to the fact that the low-salinity training accelerates the responses of crabs to low-salinity stress. These findings provide a comprehensive insight into the mechanisms of metabolic modulation in P. trituberculatus in response to low salinity. This work highlights the approach of NMR-based metabonomics in conjunction with multivariate data analysis and univariate data analysis in understanding the strategy of metabolic phenotype modulation against stressors.

Vulnerability of Eastern Caribbean Islands Economies to Large Earthquakes: The Trinidad and Tobago Case Study

NASA Astrophysics Data System (ADS)

Lynch, L.

2015-12-01

The economies of most of the Anglo-phone Eastern Caribbean islands have tripled to quadrupled in size since independence from England. There has also been commensurate growth in human and physical development as indicated by macro-economic indices such as Human Development Index and Fixed Capital Formation. A significant proportion of the accumulated wealth is invested in buildings and infrastructure which are highly susceptible to strong ground motion since the region is located along an active plate boundary. In the case of Trinidad and Tobago, Fixed Capital Formation accumulation since 1980 is almost US200 billion dollars. Recent studies have indicated that this twin island state is at significant risk from several seismic sources, both on land and offshore. To effectively mitigate the risk it is necessary to prescribe long-term measures such as the development and implementation of building code and standards, structural retrofitting, land use planning, preparedness planning and risk transfer mechanisms. The record has shown that Trinidad and Tobago has been been slow in the prescribing such measures which has consequently compounded it vulnerability to large earthquakes. This assessment reveals that the losses from a large (magnitude 7+) on land or an extreme (magnitude 8+) event could result in losses of up to US28B and that current risk transfer measures will only cater for less than ten percent of such losses.

The investigation of the possibility for using some wild and cultivated plants as hyperaccumulators of heavy metals from contaminated soil.

PubMed

Maric, Miroslava; Antonijevic, Milan; Alagic, Sladjana

2013-02-01

The copper production in Bor (East Serbia) during the last 100 years presents an important source of the pollution of environment. Dust, waste waters, tailing, and air pollutants influence the quality of soil, water, and air. Over 2,000 ha of fertile soil have been damaged by the flotation tailing from Bor's facilities. The goal of the present work has been to determine the content of Pb, Cu, and Fe in wild plants (17 species) naturally growing in the damaged soil and in fodder crops (nine species) planted at the same place. The content of Pb, Cu, and Fe has been analyzed in damaged soil as well. This study has also searched for native (wild) and cultivated plants which are able to grow in contaminated soil in the area of the intense industrial activity of copper production in Bor, which means that they can accumulate and tolerate heavy metals in their above-ground tissues. It has been found out that the content of all metals in contaminated soil decreases considerably at the end of the experiment. As it has been expected, all plant species could accumulate investigated metals. All tested plants, both wild-growing and cultivated plants, seem to be quite healthy on the substrate which contained extremely high concentrations of copper.

Phytotreatment of soil contaminated with used lubricating oil using Hibiscus cannabinus.

PubMed

Abioye, O P; Agamuthu, P; Abdul Aziz, A R

2012-04-01

Soil contamination by hydrocarbons, especially by used lubricating oil, is a growing problem in developing countries, which poses a serious threat to the environment. Phytoremediation of these contaminated soils offers environmental friendly and a cost effective method for their remediation. Hibiscus cannabinus was studied for the remediation of soil contaminated with 2.5 and 1% used lubricating oil and treated with organic wastes [banana skin (BS), brewery spent grain (BSG) and spent mushroom compost (SMC)] for a period of 90 days under natural conditions. Loss of 86.4 and 91.8% used lubricating oil was recorded in soil contaminated with 2.5 and 1% oil and treated with organic wastes respectively at the end of 90 days. However, 52.5 and 58.9% oil loss was recorded in unamended soil contaminated with 2.5 and 1% oil, respectively. The plant did not accumulate hydrocarbon from the soil but shows appreciable accumulation of Fe and Zn in the root and stem of H. cannabinus at the end of the experiment. The first order kinetic rate of uptake of Fe and Zn in H. cannabinus was higher in organic wastes amendment treatments compared to the unamended treatments, which are extremely low. The results of this study suggest that H. cannabinus has a high potential for remediation of hydrocarbon and heavy metal contaminated soil.

Trace element accumulation in bivalve mussels Anodonta woodiana from Taihu Lake, China.

PubMed

Liu, Hongbo; Yang, Jian; Gan, Juli

2010-11-01

Data are presented for 13 trace metals (Cr, Mn, Fe, Co, Ni, Cu, Zn, As, Se, Mo, Ag, Cd, and Pb) in 38 bivalve mussels Anodonta woodiana from four separate sites (Huzhou, Dapu, Sansandao, and Manshan) around the Taihu Lake of China. All elemental concentrations generally ranked in decreasing order, Mn > Fe > Zn > As ≈ Cu ≈ Cd ≈ Se > Pb > Mo ≈ Ag, except that Cr, Co, and Ni were not detected. Anodonta woodiana was able to bioaccumulate essential Mn and toxic Cd to the extremely high level of 19,240 and 53 mg/kg dry weight, respectively. Geographical differences in the concentrations of trace elements were usually significant between sampling sites except for As and Pb, and the mussels from Sanshandao site had mostly accumulated or were contaminated with essential and toxic elements. The residue level of Cd in A. woodiana from the Sanshandao and Manshan sites appeared to be even higher than those of the essential elements Cu and Se, and exceeded the corresponding maximum residue limits of China. The present study provides the most recent information on trace element bioaccumulation or contamination in Taihu Lake and, further, suggests that A. woodiana can be used as a suitable bioindicator for inland water environmental monitoring.

Communities of arbuscular mycorrhizal fungi in the roots of Pyrus pyrifolia var. culta (Japanese pear) in orchards with variable amounts of soil-available phosphorus.

PubMed

Yoshimura, Yuko; Ido, Akifumi; Iwase, Koji; Matsumoto, Teruyuki; Yamato, Masahide

2013-01-01

We examined the colonization rate and communities of arbuscular mycorrhizal fungi (AMF) in the roots of Pyrus pyrifolia var. culta (Japanese pear) in orchards to investigate the effect of phosphorus (P) fertilization on AMF. Soil cores containing the roots of Japanese pear were collected from 13 orchards in Tottori Prefecture, Japan. Soil-available P in the examined orchards was 75.7 to 1,200 mg kg(-1), showing the extreme accumulation of soil P in many orchards. The AMF colonization rate was negatively correlated with soil-available P (P <0.01). AMF communities were examined on the basis of the partial fungal DNA sequences of the nuclear small-subunit ribosomal RNA gene (SSU rDNA) amplified by AMF-specific primers AML1 and AML2. The obtained AMF sequences were divided into 14 phylotypes, and the number of phylotypes (species richness) was also negatively correlated with soil-available P (P <0.05). It was also suggested that some AM fungi may be adapted to high soil-available P conditions. Redundancy analysis showed the significant effects of soil pH, available P in soil, and P content in leaves of P. pyrifolia var. culta trees on AMF distribution. These results suggested that the accumulation of soil-available P affected AMF communities in the roots of Japanese pear in the orchard environment.

Comparison of oxidative stress in four Tillandsia species exposed to cadmium.

PubMed

Kováčik, Jozef; Babula, Petr; Klejdus, Bořivoj; Hedbavny, Josef

2014-07-01

This is first study comparing four morphologically variable species of the genus Tillandsia and therefore various responses to the cadmium (Cd) action were expected. In accordance, Cd accumulation increased in order Tillandsia fasciculata < Tillandsia brachycaulos < Tillandsia pruinosa < Tillandsia capillaris, reaching 29.6 and 197.4 μg g(-1) DW in first and last species after watering with 2 μM Cd(2+) solution over 30 days. Fluorescence visualization of oxidative stress confirmed increase in ROS and especially elevation in hydroperoxides though no visible symptoms appeared on the plants. At the same time, nitric oxide generation and nitroso-glutathione depletion by Cd treatment were typically observed. Fluorescence staining of Cd using two dyes (PhenGreen and Leadmium) showed that Leadmium fits better with AAS quantification. Macro- and micro-nutrients were not considerably affected except for zinc. Reduced glutathione content was the highest in control T. fasciculata while oxidized glutathione in T. capillaris. Ascorbic acid amount revealed extreme quantitative differences among species and decreased in T. fasciculata only. Free amino acids accumulation was similar among species except for T. capillaris and Cd caused both depletion and increase but without high quantitative differences. Data are explanatively discussed in the context of limited literature related to oxidative stress in epiphytic plants and with general responses of plants to cadmium/heavy metals. Copyright © 2014 Elsevier Masson SAS. All rights reserved.

Radioactive Contamination of Alluvial Soils in the Taiga Landscapes of Yakutia with 137Cs, 226Ra, and 238U

NASA Astrophysics Data System (ADS)

Chevychelov, A. P.; Sobakin, P. I.

2017-12-01

The concentrations and distribution of 137Cs in alluvial soils (Fluvisols) of the upper and middle reaches of the Markha River in the northwest of Yakutia and 226Ra and 238U in alluvial soils within the El'kon uranium ore deposit in the south of Yakutia have been studied. It is shown that the migration of radiocesium in the permafrost-affected soils of Yakutia owing to alluviation processes extends to more than 600 km from the source of the radioactive contamination. The migration of 137Cs with water flows is accompanied by its deposition in the buried horizons of alluvial soils during extremely high floods caused by ice jams. In the technogenic landscapes of southern Yakutia, active water migration of 238U and 226Ra from radioactive dump rocks. The leaching of 238U with surface waters from the rocks is more intense than the leaching of 226Ra. The vertical distribution patterns of 238U and 226Ra in the profiles of alluvial soils are complex. Uranium tends to accumulate in the surface humus horizon and in the buried soil horizons, whereas radium does not display any definite regularities of its distribution in the soil profiles. At present, the migration of 238U and 226Ra with river water and their accumulation in the alluvial soils extend to about 30 km from the source.

Structural adaptation of extreme halophilic proteins through decrease of conserved hydrophobic contact surface

PubMed Central

2011-01-01

Background Halophiles are extremophilic microorganisms growing optimally at high salt concentrations. There are two strategies used by halophiles to maintain proper osmotic pressure in their cytoplasm: accumulation of molar concentrations of potassium and chloride with extensive adaptation of the intracellular macromolecules ("salt-in" strategy) or biosynthesis and/or accumulation of organic osmotic solutes ("osmolyte" strategy). Our work was aimed at contributing to the understanding of the shared molecular mechanisms of protein haloadaptation through a detailed and systematic comparison of a sample of several three-dimensional structures of halophilic and non-halophilic proteins. Structural differences observed between the "salt-in" and the mesophilic homologous proteins were contrasted to those observed between the "osmolyte" and mesophilic pairs. Results The results suggest that haloadaptation strategy in the presence of molar salt concentration, but not of osmolytes, necessitates a weakening of the hydrophobic interactions, in particular at the level of conserved hydrophobic contacts. Weakening of these interactions counterbalances their strengthening by the presence of salts in solution and may help the structure preventing aggregation and/or loss of function in hypersaline environments. Conclusions Considering the significant increase of biotechnology applications of halophiles, the understanding of halophilicity can provide the theoretical basis for the engineering of proteins of great interest because stable at concentrations of salts that cause the denaturation or aggregation of the majority of macromolecules. PMID:22192175

Unlocking the genetic diversity of Creole wheats.

PubMed

Vikram, Prashant; Franco, Jorge; Burgueño-Ferreira, Juan; Li, Huihui; Sehgal, Deepmala; Saint Pierre, Carolina; Ortiz, Cynthia; Sneller, Clay; Tattaris, Maria; Guzman, Carlos; Sansaloni, Carolina Paola; Ellis, Mark; Fuentes-Davila, Guillermo; Reynolds, Matthew; Sonders, Kai; Singh, Pawan; Payne, Thomas; Wenzl, Peter; Sharma, Achla; Bains, Navtej Singh; Singh, Gyanendra Pratap; Crossa, José; Singh, Sukhwinder

2016-03-15

Climate change and slow yield gains pose a major threat to global wheat production. Underutilized genetic resources including landraces and wild relatives are key elements for developing high-yielding and climate-resilient wheat varieties. Landraces introduced into Mexico from Europe, also known as Creole wheats, are adapted to a wide range of climatic regimes and represent a unique genetic resource. Eight thousand four hundred and sixteen wheat landraces representing all dimensions of Mexico were characterized through genotyping-by-sequencing technology. Results revealed sub-groups adapted to specific environments of Mexico. Broadly, accessions from north and south of Mexico showed considerable genetic differentiation. However, a large percentage of landrace accessions were genetically very close, although belonged to different regions most likely due to the recent (nearly five centuries before) introduction of wheat in Mexico. Some of the groups adapted to extreme environments and accumulated high number of rare alleles. Core reference sets were assembled simultaneously using multiple variables, capturing 89% of the rare alleles present in the complete set. Genetic information about Mexican wheat landraces and core reference set can be effectively utilized in next generation wheat varietal improvement.

Berry phase dependent quantum trajectories of electron-hole pairs in semiconductors under intense terahertz fields

NASA Astrophysics Data System (ADS)

Yang, Fan; Liu, Ren-Bao

2013-03-01

Quantum evolution of particles under strong fields can be approximated by the quantum trajectories that satisfy the stationary phase condition in the Dirac-Feynmann path integrals. The quantum trajectories are the key concept to understand strong-field optics phenomena, such as high-order harmonic generation (HHG), above-threshold ionization (ATI), and high-order terahertz siedeband generation (HSG). The HSG in semiconductors may have a wealth of physics due to the possible nontrivial ``vacuum'' states of band materials. We find that in a spin-orbit-coupled semiconductor, the cyclic quantum trajectories of an electron-hole pair under a strong terahertz field accumulates nontrivial Berry phases. We study the monolayer MoS2 as a model system and find that the Berry phases are given by the Faraday rotation angles of the pulse emission from the material under short-pulse excitation. This result demonstrates an interesting Berry phase dependent effect in the extremely nonlinear optics of semiconductors. This work is supported by Hong Kong RGC/GRF 401512 and the CUHK Focused Investments Scheme.

Identification of Abiotic Stress Protein Biomarkers by Proteomic Screening of Crop Cultivar Diversity

PubMed Central

Barkla, Bronwyn J.

2016-01-01

Modern day agriculture practice is narrowing the genetic diversity in our food supply. This may compromise the ability to obtain high yield under extreme climactic conditions, threatening food security for a rapidly growing world population. To identify genetic diversity, tolerance mechanisms of cultivars, landraces and wild relatives of major crops can be identified and ultimately exploited for yield improvement. Quantitative proteomics allows for the identification of proteins that may contribute to tolerance mechanisms by directly comparing protein abundance under stress conditions between genotypes differing in their stress responses. In this review, a summary is provided of the data accumulated from quantitative proteomic comparisons of crop genotypes/cultivars which present different stress tolerance responses when exposed to various abiotic stress conditions, including drought, salinity, high/low temperature, nutrient deficiency and UV-B irradiation. This field of research aims to identify molecular features that can be developed as biomarkers for crop improvement, however without accurate phenotyping, careful experimental design, statistical robustness and appropriate biomarker validation and verification it will be challenging to deliver what is promised. PMID:28248236

Identification of Abiotic Stress Protein Biomarkers by Proteomic Screening of Crop Cultivar Diversity.

PubMed

Barkla, Bronwyn J

2016-09-08

Modern day agriculture practice is narrowing the genetic diversity in our food supply. This may compromise the ability to obtain high yield under extreme climactic conditions, threatening food security for a rapidly growing world population. To identify genetic diversity, tolerance mechanisms of cultivars, landraces and wild relatives of major crops can be identified and ultimately exploited for yield improvement. Quantitative proteomics allows for the identification of proteins that may contribute to tolerance mechanisms by directly comparing protein abundance under stress conditions between genotypes differing in their stress responses. In this review, a summary is provided of the data accumulated from quantitative proteomic comparisons of crop genotypes/cultivars which present different stress tolerance responses when exposed to various abiotic stress conditions, including drought, salinity, high/low temperature, nutrient deficiency and UV-B irradiation. This field of research aims to identify molecular features that can be developed as biomarkers for crop improvement, however without accurate phenotyping, careful experimental design, statistical robustness and appropriate biomarker validation and verification it will be challenging to deliver what is promised.

Transplantation of epiphytic bioaccumulators (Tillandsia capillaris) for high spatial resolution biomonitoring of trace elements and point sources deconvolution in a complex mining/smelting urban context

NASA Astrophysics Data System (ADS)

Goix, Sylvaine; Resongles, Eléonore; Point, David; Oliva, Priscia; Duprey, Jean Louis; de la Galvez, Erika; Ugarte, Lincy; Huayta, Carlos; Prunier, Jonathan; Zouiten, Cyril; Gardon, Jacques

2013-12-01

Monitoring atmospheric trace elements (TE) levels and tracing their source origin is essential for exposure assessment and human health studies. Epiphytic Tillandsia capillaris plants were used as bioaccumulator of TE in a complex polymetallic mining/smelting urban context (Oruro, Bolivia). Specimens collected from a pristine reference site were transplanted at a high spatial resolution (˜1 sample/km2) throughout the urban area. About twenty-seven elements were measured after a 4-month exposure, also providing new information values for reference material BCR482. Statistical power analysis for this biomonitoring mapping approach against classical aerosols surveys performed on the same site showed the better aptitude of T. Capillaris to detect geographical trend, and to deconvolute multiple contamination sources using geostatistical principal component analysis. Transplanted specimens in the vicinity of the mining and smelting areas were characterized by extreme TE accumulation (Sn > Ag > Sb > Pb > Cd > As > W > Cu > Zn). Three contamination sources were identified: mining (Ag, Pb, Sb), smelting (As, Sn) and road traffic (Zn) emissions, confirming results of previous aerosol survey.

Genotoxic Assessment of Some Inorganic Compounds in Desert Pupfish (Cyprinodon macularius) in the Evaporation Pond from a Geothermal Plant.

PubMed

Flores-Galván, Miguel; Arellano-García, Evarista; Ruiz-Campos, Gorgonio; Daesslé, Luis Walter

2017-08-01

The frequency of micro nucleated erythrocytes in peripheral blood of the desert pupfish (Cyprinodon macularius) from a geothermal effluent pond is determined and compared to organisms kept in an aquarium. The frequency of micronucleated erythrocytes found in pupfish from the geothermal pond is 2.75 (±2.09) and only 0.44 (±0.52) in captivity organisms. Dissolved As in the ponds doubles the 340 µg L -1 US-EPA acute quality criteria for aquatic life and Hg equals the 1.77 µg L -1 chronic criteria. The organisms with high MNE also have significantly high Se, As and Hg concentrations in muscle and liver. Compared to international maximum allowable limits for fish consumption, there is 81× enrichment for Se, 6× for As and 5× for Hg. Although Se is not significantly enriched in water, it is likely that its bioaccumulation occurs via feeding of detritus. The desert pupfish has a significant resistance to extreme metal accumulations and to recover under unpolluted conditions.

Multifunctional Nucleus-targeting Nanoparticles with Ultra-high Gene Transfection Efficiency for In Vivo Gene Therapy

PubMed Central

Li, Ling; Li, Xia; Wu, Yuzhe; Song, Linjiang; Yang, Xi; He, Tao; Wang, Ning; Yang, Suleixin; Zeng, Yan; Wu, Qinjie; Qian, Zhiyong; Wei, Yuquan; Gong, Changyang

2017-01-01

Cancer stem cell-like cells (CSCL) are responsible for tumor recurrence associated with conventional therapy (e.g. surgery, radiation, and chemotherapy). Here, we developed a novel multifunctional nucleus-targeting nanoparticle-based gene delivery system which is capable of targeting and eradicating CSCL. These nanoparticles can facilitate efficient endosomal escape and spontaneously penetrate into nucleus without additional nuclear localization signal. They also induced extremely high gene transfection efficiency (>95%) even in culture medium containing 30% serum, which significantly surpassed that of some commercial transfection reagents, such as Lipofectamine 2000 and Lipofectamine 3000 etc. Especially, when loaded with the TRAIL gene, this system mediated remarkable depletion of CSCL. Upon systemic administration, the nanoparticles accumulated in tumor sites while sparing the non-cancer tissues and significantly inhibited the growth of tumors with no evident systemic toxicity. Taken together, our results suggest that these novel multifunctional, nucleus-targeting nanoparticles are a very promising in vivo gene delivery system capable of targeting CSCL and represent a new treatment candidate for improving the survival of cancer patients. PMID:28529641

Cyanobacterial bloom in the world largest freshwater lake Baikal

NASA Astrophysics Data System (ADS)

Namsaraev, Zorigto; Melnikova, Anna; Ivanov, Vasiliy; Komova, Anastasia; Teslyuk, Anton

2018-02-01

Lake Baikal is a UNESCO World Heritage Site and holds 20% of the world’s freshwater reserves. On July 26, 2016, a cyanobacterial bloom of a green colour a few kilometers in size with a bad odor was discovered by local people in the Barguzinsky Bay on the eastern shore of Lake Baikal. Our study showed very high concentration of chlorophyll a (41.7 g/m3) in the sample of bloom. We found that the bloom was dominated by a nitrogen-fixing heterocystous cyanobacteria of the genus Dolichospermum. The mass accumulation of cyanobacteria in the lake water with an extremely high chlorophyll a concentration can be explained by a combination of several factors: the discharge of biologicaly-available nutrients, including phosphorus, into the water of Lake Baikal; low wind speed and weak water mixing; buoyant cyanobacterial cells on the lake surface, which drifted towards the eastern coast, where the maximum concentration of chlorophyll a was recorded. In the center of the Barguzinsky Bay and in the open part of Lake Baikal, according to satellite data, the chlorophyll a concentration is several orders of magnitude lower than at the shoreline.

Protein Oxidation: Key to Bacterial Desiccation Resistance?

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fredrickson, Jim K.; Li, Shu-Mei W.; Gaidamakova, E.

For extremely ionizing radiation resistant bacteria, survival has been attributed to protection of proteins from oxidative damage during irradiation, with the result that repair systems survive and function with far greater efficiency during recovery than in sensitive bacteria. Here we examined the relationship between survival of dry-climate soil bacteria and the level of cellular protein oxidation induced by desiccation. Bacteria were isolated from surface soils of the shrub-steppe of the U.S. Department of Energy’s Hanford Site in Washington state. A total of 63 isolates were used for phylogenetic analysis. The majority of isolates were closely related to members of themore » genus Deinococcus, with Chelatococcus, Methylobacterium and Bosea also among the genera identified. Desiccation-resistant isolates accumulated high intracellular manganese and low iron concentrations compared to sensitive bacteria. In vivo, proteins of desiccation-resistant bacteria were protected from oxidative modifications that introduce carbonyl groups in sensitive bacteria during drying. We present the case that survival of bacteria that inhabit dry-climate soils are highly dependent on mechanisms which limit protein oxidation during dehydration.« less

Muscle changes with eccentric exercise: Implications on earth and in space

NASA Technical Reports Server (NTRS)

Hargens, Alan R.; Parazynski, Scott; Aratow, Michael; Friden, Jan

1989-01-01

Recent investigations of fluid pressure, morpholo gy, and enzyme activities of skeletal muscle exercised eccentrically or concentrically in normal human subjects are reviewed. Intramuscular pressures were measured before, during, and after submaximal exercise and correlated with subjective muscle soreness, fiber size, water content, and blood indices of muscle enzymes. High intensity eccentric exercise is characterized by post exercise pain, elevated intramuscular pressures, and swelling of both type 1 and 2 fibers as compared to concentric exercise. Thus, long periods of unaccustomed, high level eccentric contraction may cause muscle injury, fiber swelling, fluid accumulation, elevated intramuscular pressure, and delayed muscle soreness. Training regimens of progressively increasing eccentric exercise, however, cause less soreness and are extremely efficacious in increasing muscle mass and strength. It is proposed that on Earth, postural muscles are uniquely adapted to low levels of prolonged eccentric contraction that are absent during weightlessness. The almost complete absence of eccentric exercise in space may be an important contributor to muscle atrophy and therefore equipment should be designed to integrate eccentric contractions into exercise protocols for long-term spaceflight.

Purification of arsenic-contaminated water with K-jarosite filters.

PubMed

Hott, Rodrigo C; Maia, Luiz F O; Santos, Mayra S; Faria, Márcia C; Oliveira, Luiz C A; Pereira, Márcio C; Bomfeti, Cleide A; Rodrigues, Jairo L

2018-05-01

The high toxicity and potential arsenic accumulation in several environments have encouraged the development of technologies for its removal from contaminated waters. However, the arsenic released into aquatic environment comes mainly from extremely acidic mining effluents, making harder to find stable adsorbents to be used in these conditions. In this work, K-jarosite particles were synthesized as a stable adsorbent in acidic medium for eliminating arsenic from contaminated water. The adsorption capacities of K-jarosite for As 3+ , As 5+ , and monomethylarsonic acid were 9.45, 12.36, and 8.21 mg g -1 , respectively. Most arsenic in water was adsorbed within the first 10 min, suggesting the fast arsenic adsorption kinetics of K-jarosite particles. Because of that, a K-jarosite filter was constructed for purifying water at a constant flow. The K-jarosite filter was highly efficient to treat arsenic-contaminated water from a Brazilian river, reducing the concentration of arsenic in water to near zero. These data suggest the K-jarosite filter can be used as a low-cost technology for purifying arsenic-contaminated water in acidic medium.

Dark matter searches for monoenergetic neutrinos arising from stopped meson decay in the Sun

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rott, Carsten; In, Seongjin; Kumar, Jason

Dark matter can be gravitationally captured by the Sun after scattering off solar nuclei. Annihilations of the dark matter trapped and accumulated in the centre of the Sun could result in one of the most detectable and recognizable signals for dark matter. Searches for high-energy neutrinos produced in the decay of annihilation products have yielded extremely competitive constraints on the spin-dependent scattering cross sections of dark matter with nuclei. Recently, the low energy neutrino signal arising from dark-matter annihilation to quarks which then hadronize and shower has been suggested as a competitive and complementary search strategy. These high-multiplicity hadronic showersmore » give rise to a large amount of pions which will come to rest in the Sun and decay, leading to a unique sub-GeV neutrino signal. We here improve on previous works by considering the monoenergetic neutrino signal arising from both pion and kaon decay. We consider searches at liquid scintillation, liquid argon, and water Cherenkov detectors and find very competitive sensitivities for few-GeV dark matter masses.« less

Accurate high-speed liquid handling of very small biological samples.

PubMed

Schober, A; Günther, R; Schwienhorst, A; Döring, M; Lindemann, B F

1993-08-01

Molecular biology techniques require the accurate pipetting of buffers and solutions with volumes in the microliter range. Traditionally, hand-held pipetting devices are used to fulfill these requirements, but many laboratories have also introduced robotic workstations for the handling of liquids. Piston-operated pumps are commonly used in manually as well as automatically operated pipettors. These devices cannot meet the demands for extremely accurate pipetting of very small volumes at the high speed that would be necessary for certain applications (e.g., in sequencing projects with high throughput). In this paper we describe a technique for the accurate microdispensation of biochemically relevant solutions and suspensions with the aid of a piezoelectric transducer. It is suitable for liquids of a viscosity between 0.5 and 500 milliPascals. The obtainable drop sizes range from 5 picoliters to a few nanoliters with up to 10,000 drops per second. Liquids can be dispensed in single or accumulated drops to handle a wide volume range. The system proved to be excellently suitable for the handling of biological samples. It did not show any detectable negative impact on the biological function of dissolved or suspended molecules or particles.

Development of Creep-Resistant, Alumina-Forming Ferrous Alloys for High-Temperature Structural Use

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yamamoto, Yukinori; Brady, Michael P.; Muralidharan, Govindarajan

This paper overviews recent advances in developing novel alloy design concepts of creep-resistant, alumina-forming Fe-base alloys, including both ferritic and austenitic steels, for high-temperature structural applications in fossil-fired power generation systems. Protective, external alumina-scales offer improved oxidation resistance compared to chromia-scales in steam-containing environments at elevated temperatures. Alloy design utilizes computational thermodynamic tools with compositional guidelines based on experimental results accumulated in the last decade, along with design and control of the second-phase precipitates to maximize high-temperature strengths. The alloys developed to date, including ferritic (Fe-Cr-Al-Nb-W base) and austenitic (Fe-Cr-Ni-Al-Nb base) alloys, successfully incorporated the balanced properties of steam/water vapor-oxidationmore » and/or ash-corrosion resistance and improved creep strength. Development of cast alumina-forming austenitic (AFA) stainless steel alloys is also in progress with successful improvement of higher temperature capability targeting up to ~1100°C. Current alloy design approach and developmental efforts with guidance of computational tools were found to be beneficial for further development of the new heat resistant steel alloys for various extreme environments.« less

Determination of aristolochic acids by high-performance liquid chromatography with fluorescence detection.

PubMed

Wang, Yinan; Chan, Wan

2014-06-25

Nephrotoxic and carcinogenic aristolochic acids (AAs) are naturally occurring nitrophenanthrene carboxylic acids in the herbal genus Aristolochia. The misuse of AA-containing herbs in preparing slimming drugs has caused hundred of cases of kidney disease in Belgium women in a slimming regime in the early 1990s. Accumulating evidence also suggested that prolong dietary intake of AA-contaminated food is one of the major causes to the Balkan endemic nephropathy that was first observed in the late 1950s. Therefore, analytical methods of high sensitivity are extremely important for safeguarding human exposure to AA-containing herbal medicines, herbal remedies, and food composites. In this paper, we describe the development of a new high-performance liquid chromatography coupled fluorescence detector (HPLC-FLD) method for the sensitive determination of AAs. The method makes use of a novel cysteine-induced denitration reaction that "turns on" the fluorescence of AAs for fluorometric detections. Our results showed that the combination of cysteine-induced denitration and HPLC-FLD analysis allows for sensitive quantification of AA-I and AA-II at detection limits of 27.1 and 25.4 ng/g, respectively. The method was validated and has been successfully applied in quantifying AAs in Chinese herbal medicines.

Oxidoreductases and cellulases in lichens: possible roles in lichen biology and soil organic matter turnover.

PubMed

Beckett, Richard P; Zavarzina, Anna G; Liers, Christiane

2013-06-01

Lichens are symbiotic associations of a fungus (usually an Ascomycete) with green algae and/or a cyanobacterium. They dominate on 8 % of the world's land surface, mainly in Arctic and Antarctic regions, tundra, high mountain elevations and as components of dryland crusts. In many ecosystems, lichens are the pioneers on the bare rock or soil following disturbance, presumably because of their tolerance to desiccation and high temperature. Lichens have long been recognized as agents of mineral weathering and fine-earth stabilization. Being dominant biomass producers in extreme environments they contribute to primary accumulation of soil organic matter. However, biochemical role of lichens in soil processes is unknown. Our recent research has demonstrated that Peltigeralean lichens contain redox enzymes which in free-living fungi participate in lignocellulose degradation and humification. Thus lichen enzymes may catalyse formation and degradation of soil organic matter, particularly in high-stress communities dominated by lower plants. In the present review we synthesize recently published data on lichen phenol oxidases, peroxidases, and cellulases and discuss their possible roles in lichen physiology and soil organic matter transformations. Copyright © 2013 The British Mycological Society. Published by Elsevier Ltd. All rights reserved.

Divalent metal (Ca, Cd, Mn, Zn) uptake and interactions in the aquatic insect Hydropsyche sparna.

PubMed

Poteat, Monica D; Díaz-Jaramillo, Mauricio; Buchwalter, David B

2012-05-01

Despite their ecological importance and prevalent use as ecological indicators, the trace element physiology of aquatic insects remains poorly studied. Understanding divalent metal transport processes at the water-insect interface is important because these metals may be essential (e.g. Ca), essential and potentially toxic (e.g. Zn) or non-essential and toxic (e.g. Cd). We measured accumulation kinetics of Zn and Cd across dissolved concentrations ranging 4 orders of magnitude and examined interactions with Ca and Mn in the caddisfly Hydropsyche sparna. Here, we provide evidence for at least two transport systems for both Zn and Cd, the first of which operates at concentrations below 0.8 μmol l(-1) (and is fully saturable for Zn). We observed no signs of saturation of a second lower affinity transport system at concentrations up to 8.9 μmol l(-1) Cd and 15.3 μmol l(-1) Zn. In competition studies at 0.6 μmol l(-1) Zn and Cd, the presence of Cd slowed Zn accumulation by 35% while Cd was unaffected by Zn. At extreme concentrations (listed above), Cd accumulation was unaffected by the presence of Zn whereas Zn accumulation rates were reduced by 58%. Increasing Ca from 31.1 μmol l(-1) to 1.35 mmol l(-1) resulted in only modest decreases in Cd and Zn uptake. Mn decreased adsorption of Cd and Zn to the integument but not internalization. The L-type Ca(2+) channel blockers verapamil and nifedipine and the plasma membrane Ca(2+)-ATPase inhibitor carboxyeosin had no influence on Ca, Cd or Zn accumulation rates, while Ruthenium Red, a Ca(2+)-ATPase inhibitor, significantly decreased the accumulation of all three in a concentration-dependent manner.

NITROGEN RETENTION IN THE BLOOD IN EXPERIMENTAL ACUTE NEPHRITIS OF THE CAT

PubMed Central

Folin, Otto; Karsner, Howard T.; Denis, W.

1912-01-01

It will be seen that uranium nephritis, which involves both tubules and glomeruli, the former more markedly than the latter, produces a marked accumulation of nitrogen in the blood. Chromate nephritis, which involves almost exclusively the tubules, produces only moderate retention of nitrogen. Cantharidin nephritis which involves both tubules and glomeruli, the latter more severely than does uranium, produces a marked accumulation of nitrogen, beginning early and persisting for a considerable period. The experiments were controlled by testing the blood of normal cats kept under the same conditions, these animals showing only slight variations from day to day. This general statement is in accordance with the physiological classification of these nephritides except that the retention in uranium occurs at an early stage, where, according to the physiological studies of Schlayer and his associates, and of Pearce, Hill, and Eisenbrey, the vascular changes have not as yet appeared. It must be noticed that in the three types of nephritis that form the subject of this investigation, anatomical study shows the glomerulus to be distinctly involved in the two forms where accumulation of nitrogen in the blood is most marked, a condition indicating that although almost pure tubular involvement produces only moderate accumulation, the additional involvement of the glomerulus is extremely important in leading to a retention of nitrogenous waste products. The accumulation of non-protein nitrogen in the blood and tissues is not large when compared with the total intake or elimination of nitrogen, and consequently it is practically impossible by means of ordinary nitrogen equilibrium experiments to demonstrate the fact of the retention, to say nothing of determining the degree of accumulation of waste products accompanying nephritis. That both can be demonstrated by the method employed in this research is clearly shown by the figures recorded ablove. PMID:19867613

NITROGEN RETENTION IN THE BLOOD IN EXPERIMENTAL ACUTE NEPHRITIS OF THE CAT.

PubMed

Folin, O; Karsner, H T; Denis, W

1912-12-01

It will be seen that uranium nephritis, which involves both tubules and glomeruli, the former more markedly than the latter, produces a marked accumulation of nitrogen in the blood. Chromate nephritis, which involves almost exclusively the tubules, produces only moderate retention of nitrogen. Cantharidin nephritis which involves both tubules and glomeruli, the latter more severely than does uranium, produces a marked accumulation of nitrogen, beginning early and persisting for a considerable period. The experiments were controlled by testing the blood of normal cats kept under the same conditions, these animals showing only slight variations from day to day. This general statement is in accordance with the physiological classification of these nephritides except that the retention in uranium occurs at an early stage, where, according to the physiological studies of Schlayer and his associates, and of Pearce, Hill, and Eisenbrey, the vascular changes have not as yet appeared. It must be noticed that in the three types of nephritis that form the subject of this investigation, anatomical study shows the glomerulus to be distinctly involved in the two forms where accumulation of nitrogen in the blood is most marked, a condition indicating that although almost pure tubular involvement produces only moderate accumulation, the additional involvement of the glomerulus is extremely important in leading to a retention of nitrogenous waste products. The accumulation of non-protein nitrogen in the blood and tissues is not large when compared with the total intake or elimination of nitrogen, and consequently it is practically impossible by means of ordinary nitrogen equilibrium experiments to demonstrate the fact of the retention, to say nothing of determining the degree of accumulation of waste products accompanying nephritis. That both can be demonstrated by the method employed in this research is clearly shown by the figures recorded ablove.

Association of extremely high levels of high-density lipoprotein cholesterol with cardiovascular mortality in a pooled analysis of 9 cohort studies including 43,407 individuals: The EPOCH-JAPAN study.

PubMed

Hirata, Aya; Sugiyama, Daisuke; Watanabe, Makoto; Tamakoshi, Akiko; Iso, Hiroyasu; Kotani, Kazuhiko; Kiyama, Masahiko; Yamada, Michiko; Ishikawa, Shizukiyo; Murakami, Yoshitaka; Miura, Katsuyuki; Ueshima, Hirotsugu; Okamura, Tomonori

2018-02-08

The effect of very high or extremely high levels of high-density lipoprotein cholesterol (HDL-C) on cardiovascular disease (CVD) is not well described. Although a few recent studies have reported the adverse effects of extremely high levels of HDL-C on CVD events, these did not show a statistically significant association between extremely high levels of HDL-C and cause-specific CVD mortality. In addition, Asian populations have not been studied. We examine the impact of extremely high levels of HDL-C on cause-specific CVD mortality using pooled data of Japanese cohort studies. We performed a large-scale pooled analysis of 9 Japanese cohorts including 43,407 participants aged 40-89 years, dividing the participants into 5 groups by HDL-C levels, including extremely high levels of HDL-C ≥2.33 mmol/L (≥90 mg/dL). We estimated the adjusted hazard ratio of each HDL-C category for all-cause death and cause-specific deaths compared with HDL-C 1.04-1.55 mmol/L (40-59 mg/dL) using a cohort-stratified Cox proportional hazards model. During a 12.1-year follow-up, 4995 all-cause deaths and 1280 deaths due to overall CVD were identified. Extremely high levels of HDL-C were significantly associated with increased risk of atherosclerotic CVD mortality (hazard ratio = 2.37, 95% confidence interval: 1.37-4.09 for total) and increased risk for coronary heart disease and ischemic stroke. In addition, the risk for extremely high HDL-C was more evident among current drinkers. We showed extremely high levels of HDL-C had an adverse effect on atherosclerotic CVD mortality in a pooled analysis of Japanese cohorts. Copyright © 2018 National Lipid Association. Published by Elsevier Inc. All rights reserved.

Extermophylic microorganisms: issue of interplanetary transfer on external spacecraft surfaces.

NASA Astrophysics Data System (ADS)

Novikova, N.; Deshevaya, E.; Polykarpov, N.; Svistunova, Y.; Grigoriev, A.

Interplanetary transfer of terrestrial microbes capable of surviving in extreme environments and planetary protection from accidental biocontamination by them are the issues of major practical rather than hypothetical value The natural resistance of microbes to extreme environments and a possibility of their transfer beyond geographical barriers of Earth on external spacecraft surfaces have brought forward a need in profound research into the likelihood of their survival in outer space Hardware and a program have been developed at the State Scientific Research Center of the Russian Federation -- Institute for Biomedical Problems with the goal of carrying out a space experiment Biorisk The experiment was aimed at assessing the possibility of long-term comparable with the duration of the Martian flight survival of microorganisms in outer space on materials used in space industry Samples of materials were contaminated with test cultures of bacteria Bacillus and fungi Aspergillus Penicillium Cladosporium known to be common residents of various environments on Earth and resistant to multiple alternation of high and low temperatures Materials used in the construction of external spacecraft surfaces such as steel aluminium alloy heat-insulating coating were chosen as test samples for the experiment Containers with materials and test microorganisms were placed on the external side of the Russian segment of the ISS Unique data have been accumulated after a 204 day exposure on the external side of the ISS which have proved that

Resistance of extremely halophilic archaea to zinc and zinc oxide nanoparticles

NASA Astrophysics Data System (ADS)

Salgaonkar, Bhakti B.; Das, Deepthi; Bragança, Judith Maria

2016-02-01

Industrialization as well as other anthropogenic activities have resulted in addition of high loads of metal and/or metal nanoparticles to the environment. In this study, the effect of one of the widely used heavy metal, zinc (Zn) and zinc oxide nanoparticles (ZnO NPs) on extremely halophilic archaea was evaluated. One representative member from four genera namely Halococcus, Haloferax, Halorubrum and Haloarcula of the family Halobacteriaceae was taken as the model organism. All the haloarchaeal genera investigated were resistant to both ZnCl2 and ZnO NPs at varying concentrations. Halococcus strain BK6 and Haloferax strain BBK2 showed the highest resistance in complex/minimal medium of up to 2.0/1.0 mM ZnCl2 and 2.0/1.0-0.5 mM ZnO NP. Accumulation of ZnCl2/ZnO NPs was seen as Haloferax strain BBK2 (287.2/549.6 mg g-1) > Halococcus strain BK6 (165.9/388.5 mg g-1) > Haloarcula strain BS2 (93.2/28.5 mg g-1) > Halorubrum strain BS17 (29.9/16.2 mg g-1). Scanning electron microscopy and energy dispersive X-ray spectroscopy (SEM-EDX) analysis revealed that bulk ZnCl2 was sorbed at a higher concentration (21.77 %) on the cell surface of Haloferax strain BBK2 as compared to the ZnO NPs (14.89 %).

Extreme flood estimation by the SCHADEX method in a snow-driven catchment: application to Atnasjø (Norway)

NASA Astrophysics Data System (ADS)

Paquet, Emmanuel; Lawrence, Deborah

2013-04-01

The SCHADEX method for extreme flood estimation was developed by Paquet et al. (2006, 2013), and since 2008, it is the reference method used by Electricité de France (EDF) for dam spillway design. SCHADEX is a so-called "semi-continuous" stochastic simulation method in that flood events are simulated on an event basis and are superimposed on a continuous simulation of the catchment saturation hazard usingrainfall-runoff modelling. The MORDOR hydrological model (Garçon, 1999) has thus far been used for the rainfall-runoff modelling. MORDOR is a conceptual, lumped, reservoir model with daily areal rainfall and air temperature as the driving input data. The principal hydrological processes represented are evapotranspiration, direct and indirect runoff, ground water, snow accumulation and melt, and routing. The model has been intensively used at EDF for more than 15 years, in particular for inflow forecasts for French mountainous catchments. SCHADEX has now also been applied to the Atnasjø catchment (463 km²), a well-documented inland catchment in south-central Norway, dominated by snowmelt flooding during spring/early summer. To support this application, a weather pattern classification based on extreme rainfall was first established for Norway (Fleig, 2012). This classification scheme was then used to build a Multi-Exponential Weather Pattern distribution (MEWP), as introduced by Garavaglia et al. (2010) for extreme rainfall estimation. The MORDOR model was then calibrated relative to daily discharge data for Atnasjø. Finally, a SCHADEX simulation was run to build a daily discharge distribution with a sufficient number of simulations for assessing the extreme quantiles. Detailed results are used to illustrate how SCHADEX handles the complex and interacting hydrological processes driving flood generation in this snow driven catchment. Seasonal and monthly distributions, as well as statistics for several thousand simulated events reaching a 1000 years return level value and assessment of snowmelt role in extreme floods are presented. This study illustrates the complexity of the extreme flood estimation in snow driven catchments, and the need for a good representation of snow accumulation and melting processes in simulations for design flood estimations. In particular, the SCHADEX method is able to represent a range of possible catchment conditions (representing both soil moisture and snowmelt) in which extreme flood events can occur. This study is part of a collaboration between NVE and EDF, initiated within the FloodFreq COST Action (http://www.cost-floodfreq.eu/). References: Fleig, A., Scientific Report of the Short Term Scientific Mission Anne Fleig visiting Électricité de France, FloodFreq COST action - STSM report, 2012 Garavaglia, F., Gailhard, J., Paquet, E., Lang, M., Garçon, R., and Bernardara, P., Introducing a rainfall compound distribution model based on weather patterns sub-sampling, Hydrol. Earth Syst. Sci., 14, 951-964, doi:10.5194/hess-14-951-2010, 2010 Garçon, R. Modèle global pluie-débit pour la prévision et la prédétermination des crues, La Houille Blanche, 7-8, 88-95. doi: 10.1051/lhb/1999088 Paquet, E., Gailhard, J. and Garçon, R. (2006), Evolution of the GRADEX method: improvement by atmospheric circulation classification and hydrological modeling, La Houille Blanche, 5, 80-90. doi: 10.1051/lhb/2006091 Paquet, E., Garavaglia, F., Garçon, R. and Gailhard, J. (2012), The SCHADEX method: a semi-continuous rainfall-runoff simulation for extreme food estimation, Journal of Hydrology, under revision

Extraordinarily High Leaf Selenium to Sulfur Ratios Define ‘Se-accumulator’ Plants

PubMed Central

White, Philip J.; Bowen, Helen C.; Marshall, Bruce; Broadley, Martin R.

2007-01-01

Background and Aims Selenium (Se) and sulfur (S) exhibit similar chemical properties. In flowering plants (angiosperms) selenate and sulfate are acquired and assimilated by common transport and metabolic pathways. It is hypothesized that most angiosperm species show little or no discrimination in the accumulation of Se and S in leaves when their roots are supplied a mixture of selenate and sulfate, but some, termed Se-accumulator plants, selectively accumulate Se in preference to S under these conditions. Methods This paper surveys Se and S accumulation in leaves of 39 angiosperm species, chosen to represent the range of plant Se accumulation phenotypes, grown hydroponically under identical conditions. Results The data show that, when supplied a mixture of selenate and sulfate: (1) plant species differ in both their leaf Se ([Se]leaf) and leaf S ([S]leaf) concentrations; (2) most angiosperms show little discrimination for the accumulation of Se and S in their leaves and, in non-accumulator plants, [Se]leaf and [S]leaf are highly correlated; (3) [Se]leaf in Se-accumulator plants is significantly greater than in other angiosperms, but [S]leaf, although high, is within the range expected for angiosperms in general; and (4) the Se/S quotient in leaves of Se-accumulator plants is significantly higher than in leaves of other angiosperms. Conclusion The traits of extraordinarily high [Se]leaf and leaf Se/S quotients define the distinct elemental composition of Se-accumulator plants. PMID:17525099

Two types of squalor: findings from a factor analysis of the Environmental Cleanliness and Clutter Scale (ECCS).

PubMed

Snowdon, John; Halliday, Graeme; Hunt, Glenn E

2013-07-01

Most people who collect and hoard, and then have difficulty discarding items, do not live in squalor, even though accumulation of hoarded items can make cleaning very difficult. Commonly, people living in squalor accumulate garbage, but relatively few fulfill proposed criteria for "hoarding disorder." We examined the overlap between hoarding and squalor among people referred because of unacceptable living conditions. Ongoing collection of data by a Squalor Project team, including ratings on the Environmental Cleanliness and Clutter Scale (ECCS), allowed (1) description of characteristics of cases and (2) examination of ratings of uncleanliness, and of the effect of accumulation of items or material on access within dwellings. Principal component analysis was used to examine latent variables underlying the ECCS. The mean age of the referred occupants (108 male, 95 female) was 61.9 years. The mean ECCS score in 186 rated cases was 18.5. Factor analysis of ECCS data showed a two-factor solution as the most plausible. Factor 1, comprising seven squalor items, accounted for 33.7% of the variance. Factor 2 comprised reduced accessibility and accumulation of items of little value (variance 17.6%). Accumulation of garbage loaded equally on the two factors. High levels of squalor and/or accumulation were recorded in 105 (56%) of the 186 dwellings. One-third scored high on accumulation/hoarding, while 38% scored high on squalor; 15% scored high on both squalor and accumulation. A quarter of those scoring high on squalor scored low on hoarding/accumulation. The ECCS is useful when describing whether referred cases show high levels of squalor, hoarding, or both.

New approaches in clinical application of laser-driven ionizing radiation

NASA Astrophysics Data System (ADS)

Hideghéty, Katalin; Szabó, Rita Emilia; Polanek, Róbert; Szabó, Zoltán.; Brunner, Szilvia; Tőkés, Tünde

2017-05-01

The planned laser-driven ionizing beams (photon, very high energy electron, proton, carbon ion) at laser facilities have the unique property of ultra-high dose rate (>Gy/s-10), short pulses, and at ELI-ALPS high repetition rate, carry the potential to develop novel laser-driven methods towards compact hospital-based clinical application. The enhanced flexibility in particle and energy selection, the high spatial and time resolution and extreme dose rate could be highly beneficial in radiotherapy. These approaches may increase significantly the therapeutic index over the currently available advanced radiation oncology methods. We highlight two nuclear reactionbased binary modalities and the planned radiobiology research. Boron Neutron Capture Therapy is an advanced cell targeted modality requiring 10B enriched boron carrier and appropriate neutron beam. The development of laser-based thermal and epithermal neutron source with as high as 1010 fluence rate could enhance the research activity in this promising field. Boron-Proton Fusion reaction is as well as a binary approach, where 11B containing compounds are accumulated into the cells, and the tumour selectively irradiated with protons. Due to additional high linear energy transfer alpha particle release of the BPFR and the maximum point of the Bragg-peak is increased, which result in significant biological effect enhancement. Research at ELI-ALPS on detection of biological effect differences of modified or different quality radiation will be presented using recently developed zebrafish embryo and rodent models.

Discharge source with gas curtain for protecting optics from particles

DOEpatents

Fornaciari, Neal R.; Kanouff, Michael P.

2004-03-30

A gas curtain device is employed to deflect debris that is generated by an extreme ultraviolet and soft x-ray radiation discharge source such as an electric discharge plasma source. The gas curtain device projects a stream of gas over the path of the radiation to deflect debris particles into a direction that is different from that of the path of the radiation. The gas curtain can be employed to prevent debris accumulation on the optics used in photolithography.

64Cu-DOTA-anti-CTLA-4 mAb enabled PET visualization of CTLA-4 on the T-cell infiltrating tumor tissues.

PubMed

Higashikawa, Kei; Yagi, Katsuharu; Watanabe, Keiko; Kamino, Shinichiro; Ueda, Masashi; Hiromura, Makoto; Enomoto, Shuichi

2014-01-01

Cytotoxic T lymphocyte-associated antigen-4 (CTLA-4) targeted therapy by anti-CTLA-4 monoclonal antibody (mAb) is highly effective in cancer patients. However, it is extremely expensive and potentially produces autoimmune-related adverse effects. Therefore, the development of a method to evaluate CTLA-4 expression prior to CTLA-4-targeted therapy is expected to open doors to evidence-based and cost-efficient medical care and to avoid adverse effects brought about by ineffective therapy. In this study, we aimed to develop a molecular imaging probe for CTLA-4 visualization in tumor. First, we examined CTLA-4 expression in normal colon tissues, cultured CT26 cells, and CT26 tumor tissues from tumor-bearing BALB/c mice and BALB/c nude mice by reverse transcription polymerase chain reaction (RT-PCR) analysis and confirmed whether CTLA-4 is strongly expressed in CT26 tumor tissues. Second, we newly synthesized 64Cu-1,4,7,10-tetraazacyclododecane-N,N',N″,N‴-tetraacetic acid-anti-mouse CTLA-4 mAb (64Cu-DOTA-anti-CTLA-4 mAb) and evaluated its usefulness in positron emission tomography (PET) and ex-vivo biodistribution analysis in CT26-bearing BALB/c mice. High CTLA-4 expression was confirmed in the CT26 tumor tissues of tumor-bearing BALB/c mice. However, CTLA-4 expression was extremely low in the cultured CT26 cells and the CT26 tumor tissues of tumor-bearing BALB/c nude mice. The results suggested that T cells were responsible for the high CTLA-4 expression. Furthermore, 64Cu-DOTA-anti-CTLA-4 mAb displayed significantly high accumulation in the CT26 tumor, thereby realizing non-invasive CTLA-4 visualization in the tumor. Together, the results indicate that 64Cu-DOTA-anti-CTLA-4 mAb would be useful for the evaluation of CTLA-4 expression in tumor.

64Cu-DOTA-Anti-CTLA-4 mAb Enabled PET Visualization of CTLA-4 on the T-Cell Infiltrating Tumor Tissues

PubMed Central

Higashikawa, Kei; Yagi, Katsuharu; Watanabe, Keiko; Kamino, Shinichiro; Ueda, Masashi; Hiromura, Makoto; Enomoto, Shuichi

2014-01-01

Cytotoxic T lymphocyte-associated antigen-4 (CTLA-4) targeted therapy by anti-CTLA-4 monoclonal antibody (mAb) is highly effective in cancer patients. However, it is extremely expensive and potentially produces autoimmune-related adverse effects. Therefore, the development of a method to evaluate CTLA-4 expression prior to CTLA-4-targeted therapy is expected to open doors to evidence-based and cost-efficient medical care and to avoid adverse effects brought about by ineffective therapy. In this study, we aimed to develop a molecular imaging probe for CTLA-4 visualization in tumor. First, we examined CTLA-4 expression in normal colon tissues, cultured CT26 cells, and CT26 tumor tissues from tumor-bearing BALB/c mice and BALB/c nude mice by reverse transcription polymerase chain reaction (RT-PCR) analysis and confirmed whether CTLA-4 is strongly expressed in CT26 tumor tissues. Second, we newly synthesized 64Cu-1,4,7,10-tetraazacyclododecane-N,N′,N″,N‴-tetraacetic acid-anti-mouse CTLA-4 mAb (64Cu-DOTA-anti-CTLA-4 mAb) and evaluated its usefulness in positron emission tomography (PET) and ex-vivo biodistribution analysis in CT26-bearing BALB/c mice. High CTLA-4 expression was confirmed in the CT26 tumor tissues of tumor-bearing BALB/c mice. However, CTLA-4 expression was extremely low in the cultured CT26 cells and the CT26 tumor tissues of tumor-bearing BALB/c nude mice. The results suggested that T cells were responsible for the high CTLA-4 expression. Furthermore, 64Cu-DOTA-anti-CTLA-4 mAb displayed significantly high accumulation in the CT26 tumor, thereby realizing non-invasive CTLA-4 visualization in the tumor. Together, the results indicate that 64Cu-DOTA-anti-CTLA-4 mAb would be useful for the evaluation of CTLA-4 expression in tumor. PMID:25365349

Predictive modeling of crystal accumulation in high-level waste glass melters processing radioactive waste

NASA Astrophysics Data System (ADS)

Matyáš, Josef; Gervasio, Vivianaluxa; Sannoh, Sulaiman E.; Kruger, Albert A.

2017-11-01

The effectiveness of high-level waste vitrification at Hanford's Waste Treatment and Immobilization Plant may be limited by precipitation/accumulation of spinel crystals [(Fe, Ni, Mn, Zn)(Fe, Cr)2O4] in the glass discharge riser of Joule-heated ceramic melters during idling. These crystals do not affect glass durability; however, if accumulated in thick layers, they can clog the melter and prevent discharge of molten glass into canisters. To address this problem, an empirical model was developed that can predict thicknesses of accumulated layers as a function of glass composition. This model predicts well the accumulation of single crystals and/or small-scale agglomerates, but excessive agglomeration observed in high-Ni-Fe glass resulted in an underprediction of accumulated layers, which gradually worsened over time as an increased number of agglomerates formed. The accumulation rate of ∼53.8 ± 3.7 μm/h determined for this glass will result in a ∼26 mm-thick layer after 20 days of melter idling.

Intraspecific variation in cadmium tolerance and accumulation of a high-biomass tropical tree Averrhoa carambola L.: implication for phytoextraction.

PubMed

Dai, Zi-yun; Shu, Wen-sheng; Liao, Bin; Wan, Cai-yun; Li, Jin-tian

2011-06-01

Averrhoa carambola L., a high-biomass tropical tree, has recently been shown to be a strong accumulator of cadmium (Cd) and has great potential for Cd phytoextraction. In the present study, field studies and a controlled-environment experiment were combined to establish the extent of variation in Cd tolerance and accumulation at the cultivar level using 14 to 19 cultivars of A. carambola. The results indicated that all cultivars tested could accumulate Cd at high but different levels, and that Cd tolerance also varied greatly between these cultivars. It is confirmed that the high Cd tolerance and accumulation capacity are species-level and constitutional traits in A. carambola. However, no correlation was detected between tolerance index and accumulation of Cd in different cultivars, suggesting that the two traits are independent in this woody Cd accumulator. More importantly, cultivar Wuchuan Sweet (WCT) was shown to have the highest Cd-extraction potential; it yielded a high shoot biomass of 30 t ha(-1) in 230 d, and extracted 330 g ha(-1) Cd in the aerial tissues grown in Cd-contaminated field soil, which accounted for 12.8% of the total soil Cd in the top 20 cm of the soil profile.

The meteorology and chemistry of high nitrogen oxide concentrations in the stable boundary layer at the South Pole

NASA Astrophysics Data System (ADS)

Neff, William; Crawford, Jim; Buhr, Marty; Nicovich, John; Chen, Gao; Davis, Douglas

2018-03-01

Four summer seasons of nitrogen oxide (NO) concentrations were obtained at the South Pole (SP) during the Sulfur Chemistry in the Antarctic Troposphere (ISCAT) program (1998 and 2000) and the Antarctic Tropospheric Chemistry Investigation (ANTCI) in (2003, 2005, 2006-2007). Together, analyses of the data collected from these studies provide insight into the large- to small-scale meteorology that sets the stage for extremes in NO and the significant variability that occurs day to day, within seasons, and year to year. In addition, these observations reveal the interplay between physical and chemical processes at work in the stable boundary layer of the high Antarctic plateau. We found a systematic evolution of the large-scale wind system over the ice sheet from winter to summer that controls the surface boundary layer and its effect on NO: initially in early spring (Days 280-310) the transport of warm air and clouds over West Antarctica dominates the environment over the SP; in late spring (Days 310-340), the winds at 300 hPa exhibit a bimodal behavior alternating between northwest and southeast quadrants, which is of significance to NO; in early summer (Days 340-375), the flow aloft is dominated by winds from the Weddell Sea; and finally, during late spring, winds aloft from the southeast are strongly associated with clear skies, shallow stable boundary layers, and light surface winds from the east - it is under these conditions that the highest NO occurs. Examination of the winds at 300 hPa from 1961 to 2013 shows that this seasonal pattern has not changed significantly, although the last twenty years have seen an increasing trend in easterly surface winds at the SP. What has also changed is the persistence of the ozone hole, often into early summer. With lower total ozone column density and higher sun elevation, the highest actinic flux responsible for the photolysis of snow nitrate now occurs in late spring under the shallow boundary layer conditions optimum for high accumulation of NO. This may occur via the non-linear HOX-NOx chemistry proposed after the first ISCAT field programs and NOx recycling to the surface where quantum yields may be large under the low-snow-accumulation regime of the Antarctic plateau. During the 2003 field program a sodar made direct measurements of the stable boundary layer depth (BLD), a key factor in explaining the chemistry of the high NO concentrations. Because direct measurements were not available in the other years, we developed an estimator for BLD using direct observations obtained in 2003 and step-wise linear regression with meteorological data from a 22 m tower (that was tested against independent data obtained in 1993). These data were then used with assumptions about the column abundance of NO to estimate surface fluxes of NOx. These results agreed in magnitude with results at Concordia Station and confirmed significant daily, intraseasonal and interannual variability in NO and its flux from the snow surface. Finally, we found that synoptic to mesoscale eddies governed the boundary layer circulation and accumulation pathways for NO at the SP rather than katabatic forcing. It was the small-scale features of the circulation including the transition from cloudy to clear conditions that set the stage for short-term extremes in NO, whereas larger-scale features were associated with more moderate concentrations.

Generation of multivariate near shore extreme wave conditions based on an extreme value copula for offshore boundary conditions.

NASA Astrophysics Data System (ADS)

Leyssen, Gert; Mercelis, Peter; De Schoesitter, Philippe; Blanckaert, Joris

2013-04-01

Near shore extreme wave conditions, used as input for numerical wave agitation simulations and for the dimensioning of coastal defense structures, need to be determined at a harbour entrance situated at the French North Sea coast. To obtain significant wave heights, the numerical wave model SWAN has been used. A multivariate approach was used to account for the joint probabilities. Considered variables are: wind velocity and direction, water level and significant offshore wave height and wave period. In a first step a univariate extreme value distribution has been determined for the main variables. By means of a technique based on the mean excess function, an appropriate member of the GPD is selected. An optimal threshold for peak over threshold selection is determined by maximum likelihood optimization. Next, the joint dependency structure for the primary random variables is modeled by an extreme value copula. Eventually the multivariate domain of variables was stratified in different classes, each of which representing a combination of variable quantiles with a joint probability, which are used for model simulation. The main variable is the wind velocity, as in the area of concern extreme wave conditions are wind driven. The analysis is repeated for 9 different wind directions. The secondary variable is water level. In shallow waters extreme waves will be directly affected by water depth. Hence the joint probability of occurrence for water level and wave height is of major importance for design of coastal defense structures. Wind velocity and water levels are only dependent for some wind directions (wind induced setup). Dependent directions are detected using a Kendall and Spearman test and appeared to be those with the longest fetch. For these directions, wind velocity and water level extreme value distributions are multivariately linked through a Gumbel Copula. These distributions are stratified into classes of which the frequency of occurrence can be calculated. For the remaining directions the univariate extreme wind velocity distribution is stratified, each class combined with 5 high water levels. The wave height at the model boundaries was taken into account by a regression with the extreme wind velocity at the offshore location. The regression line and the 95% confidence limits where combined with each class. Eventually the wave period is computed by a new regression with the significant wave height. This way 1103 synthetic events were selected and simulated with the SWAN wave model, each of which a frequency of occurrence is calculated for. Hence near shore significant wave heights are obtained with corresponding frequencies. The statistical distribution of the near shore wave heights is determined by sorting the model results in a descending order and accumulating the corresponding frequencies. This approach allows determination of conditional return periods. For example, for the imposed univariate design return periods of 100 years for significant wave height and 30 years for water level, the joint return period for a simultaneous exceedance of both conditions can be computed as 4000 years. Hence, this methodology allows for a probabilistic design of coastal defense structures.

Genome-wide exploration of silicon (Si) transporter genes, Lsi1 and Lsi2 in plants; insights into Si-accumulation status/capacity of plants.

PubMed

Vatansever, Recep; Ozyigit, Ibrahim Ilker; Filiz, Ertugrul; Gozukirmizi, Nermin

2017-04-01

Silicon (Si) is a nonessential, beneficial micronutrient for plants. It increases the plant stress tolerance in relation to its accumulation capacity. In this work, root Si transporter genes were characterized in 17 different plants and inferred for their Si-accumulation status. A total of 62 Si transporter genes (31 Lsi1 and 31 Lsi2) were identified in studied plants. Lsi1s were 261-324 residues protein with a MIP family domain whereas Lsi2s were 472-547 residues with a citrate transporter family domain. Lsi1s possessed characteristic sequence features that can be employed as benchmark in prediction of Si-accumulation status/capacity of the plants. Silicic acid selectivity in Lsi1s was associated with two highly conserved NPA (Asn-Pro-Ala) motifs and a Gly-Ser-Gly-Arg (GSGR) ar/R filter. Two NPA regions were present in all Lsi1 members but some Ala substituted with Ser or Val. GSGR filter was only available in the proposed high and moderate Si accumulators. In phylogeny, Lsi1s formed three clusters as low, moderate and high Si accumulators based on tree topology and availability of GSGR filter. Low-accumulators contained filters WIGR, AIGR, FAAR, WVAR and AVAR, high-accumulators only with GSGR filter, and moderate-accumulators mostly with GSGR but some with A/CSGR filters. A positive correlation was also available between sequence homology and Si-accumulation status of the tested plants. Thus, availability of GSGR selectivity filter and sequence homology degree could be used as signatures in prediction of Si-accumulation status in experimentally uncharacterized plants. Moreover, interaction partner and expression profile analyses implicated the involvement of Si transporters in plant stress tolerance.

Future changes in hydro-climatic extremes in the Upper Indus, Ganges, and Brahmaputra River basins

PubMed Central

Lutz, Arthur F.; Nepal, Santosh; Khanal, Sonu; Pradhananga, Saurav; Shrestha, Arun B.; Immerzeel, Walter W.

2017-01-01

Future hydrological extremes, such as floods and droughts, may pose serious threats for the livelihoods in the upstream domains of the Indus, Ganges, Brahmaputra. For this reason, the impacts of climate change on future hydrological extremes is investigated in these river basins. We use a fully-distributed cryospheric-hydrological model to simulate current and future hydrological fluxes and force the model with an ensemble of 8 downscaled General Circulation Models (GCMs) that are selected from the RCP4.5 and RCP8.5 scenarios. The model is calibrated on observed daily discharge and geodetic mass balances. The climate forcing and the outputs of the hydrological model are used to evaluate future changes in climatic extremes, and hydrological extremes by focusing on high and low flows. The outcomes show an increase in the magnitude of climatic means and extremes towards the end of the 21st century where climatic extremes tend to increase stronger than climatic means. Future mean discharge and high flow conditions will very likely increase. These increases might mainly be the result of increasing precipitation extremes. To some extent temperature extremes might also contribute to increasing discharge extremes, although this is highly dependent on magnitude of change in temperature extremes. Low flow conditions may occur less frequently, although the uncertainties in low flow projections can be high. The results of this study may contribute to improved understanding on the implications of climate change for the occurrence of future hydrological extremes in the Hindu Kush–Himalayan region. PMID:29287098

Probabilistic forecasting of extreme weather events based on extreme value theory

NASA Astrophysics Data System (ADS)

Van De Vyver, Hans; Van Schaeybroeck, Bert

2016-04-01

Extreme events in weather and climate such as high wind gusts, heavy precipitation or extreme temperatures are commonly associated with high impacts on both environment and society. Forecasting extreme weather events is difficult, and very high-resolution models are needed to describe explicitly extreme weather phenomena. A prediction system for such events should therefore preferably be probabilistic in nature. Probabilistic forecasts and state estimations are nowadays common in the numerical weather prediction community. In this work, we develop a new probabilistic framework based on extreme value theory that aims to provide early warnings up to several days in advance. We consider the combined events when an observation variable Y (for instance wind speed) exceeds a high threshold y and its corresponding deterministic forecasts X also exceeds a high forecast threshold y. More specifically two problems are addressed:} We consider pairs (X,Y) of extreme events where X represents a deterministic forecast, and Y the observation variable (for instance wind speed). More specifically two problems are addressed: Given a high forecast X=x_0, what is the probability that Y>y? In other words: provide inference on the conditional probability: [ Pr{Y>y|X=x_0}. ] Given a probabilistic model for Problem 1, what is the impact on the verification analysis of extreme events. These problems can be solved with bivariate extremes (Coles, 2001), and the verification analysis in (Ferro, 2007). We apply the Ramos and Ledford (2009) parametric model for bivariate tail estimation of the pair (X,Y). The model accommodates different types of extremal dependence and asymmetry within a parsimonious representation. Results are presented using the ensemble reforecast system of the European Centre of Weather Forecasts (Hagedorn, 2008). Coles, S. (2001) An Introduction to Statistical modelling of Extreme Values. Springer-Verlag.Ferro, C.A.T. (2007) A probability model for verifying deterministic forecasts of extreme events. Wea. Forecasting {22}, 1089-1100.Hagedorn, R. (2008) Using the ECMWF reforecast dataset to calibrate EPS forecasts. ECMWF Newsletter, {117}, 8-13.Ramos, A., Ledford, A. (2009) A new class of models for bivariate joint tails. J.R. Statist. Soc. B {71}, 219-241.

Exacerbation of liver steatosis following exposure to famine and overnutrition.

PubMed

Ning, Zhiyuan; Zhang, Kun; Zhao, Li; Lu, You; Sun, Honglin; Chen, Chi; Nie, Xiaomin; Lu, Meng; Wang, Ningjian; Lu, Yingli

2017-10-01

People suffering from famine in early life and overnutrition in adulthood may have an increased risk for liver steatosis. We aimed to investigate the effects and mechanisms of early nutrition restriction and overnutrition on de novo lipogenesis in the liver. Three-wk-old male rats were food restricted for 4 wk and refed a high-fat or normal fat diet individually in metabolic cages for 9 wk. Weight-matched groups were also set up. Fatty acid synthetase expression was measured to estimate de novo lipogenesis in the liver. Parameters of glucose and lipid metabolism were measured with isotope assays. All four groups had comparable body weights. However, the famine high-fat diet group had the highest degree of liver steatosis, the greatest body fat ratio, and insulin resistance. Lipid accumulation, fatty acid synthetase expression, and gluconeogenesis in the liver were significantly higher in the famine and high-fat diet groups (p < 0.05). Moreover, these groups also had markedly lower muscle glucose uptake. Under famine and high-fat refeeding stress, rats were extremely susceptible to developing hepatic steatosis. This is presumably a consequence of upregulation of de novo lipogenesis and enhanced glucose flux from muscle to de novo lipogenesis in the liver. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

The role of floridoside in osmoadaptation of coral-associated algal endosymbionts to high-salinity conditions

PubMed Central

Ochsenkühn, Michael A.; Röthig, Till; D’Angelo, Cecilia; Wiedenmann, Jörg; Voolstra, Christian R.

2017-01-01

The endosymbiosis between Symbiodinium dinoflagellates and stony corals provides the foundation of coral reef ecosystems. The survival of these ecosystems is under threat at a global scale, and better knowledge is needed to conceive strategies for mitigating future reef loss. Environmental disturbance imposing temperature, salinity, and nutrient stress can lead to the loss of the Symbiodinium partner, causing so-called coral bleaching. Some of the most thermotolerant coral-Symbiodinium associations occur in the Persian/Arabian Gulf and the Red Sea, which also represent the most saline coral habitats. We studied whether Symbiodinium alter their metabolite content in response to high-salinity environments. We found that Symbiodinium cells exposed to high salinity produced high levels of the osmolyte 2-O-glycerol-α-d-galactopyranoside (floridoside), both in vitro and in their coral host animals, thereby increasing their capacity and, putatively, the capacity of the holobiont to cope with the effects of osmotic stress in extreme environments. Given that floridoside has been previously shown to also act as an antioxidant, this osmolyte may serve a dual function: first, to serve as a compatible organic osmolyte accumulated by Symbiodinium in response to elevated salinities and, second, to counter reactive oxygen species produced as a consequence of potential salinity and heat stress. PMID:28835914

Evidence of Teleconnections between the Peruvian central Andes and Northeast Brazil during extreme rainfall events

NASA Astrophysics Data System (ADS)

Sulca, J. C.; Vuille, M. F.; Silva, F. Y.; Takahashi, K.

2013-12-01

Knowledge about changes in regional circulation and physical processes associated with extreme rainfall events in South America is limited. Here we investigate such events over the Mantaro basin (MB) located at (10°S-13°S; 73°W-76°W) in the central Peruvian Andes and Northeastern Brazil (NEB), located at (9°S-15°S; 39°W-46°W). Occasional dry and wet spells can be observed in both areas during the austral summer season. The main goal of this study is to investigate potential teleconnections between extreme rainfall events in MB and NEB during austral summer. We define wet (dry) spells as periods that last for at least 3 (5) consecutive days with rainfall above (below) the 70 (30) percentile. To identify the dates of ocurrence of these events, we used daily accumulated rainfall data from 14 climate stations located in the Mantaro basin for the period 1965 to 2002. In NEB we defined a rainfall index which is based on average daily gridded rainfall data within the region for the same period. Dry (wet spells) in the MB are associated with positive (negative) OLR anomalies which extend over much of the tropical Andes, indicating the large-scale nature of these events. At 200 hPa anomalous easterly (westerly) zonal winds aloft accompany wet (dry) spells. Composite anomalies of dry spells in MB reveal significant contemporaneous precipitation anomalies of the opposite sign over NEB, which suggest that intraseasonal precipitation variability over the two regions may be dynamically linked. Indeed upper-tropospheric circulation anomalies over the central Andes extend across South America and appear to be tied to an adjustment in the Bolivian High-Nordeste Low system. Dry (wet) spells in NEB are equally associated with a large-scale pattern of positive (negative) OLR anomalies; however, there are no related significant OLR anomalies over the MB during these events. Dry (wet) spells are associated with robust patterns of anomalous wind fields at both low and upper levels, caused by a changing position of the South Atlantic Convergence Zone (SACZ) toward the southwest (northeast). But, there is no coincident robust pattern of wind anomalies over the Mantaro Basin. In conclusion, dry spells in the Mantaro basin appear to be dynamically linked to wet spells in NEB, since 62% of all dry events in MB coincide with wet spells in NEB (35% of all events). The dynamical link explaining the observed teleconnection and the resulting dipole pattern between precipitation extremes in the MB and NEB region, respectively, appears to be related to intraseasonal variability in the Bolivian High - Nordeste Low system. Only 26.53% of all wet spells, however, coincide with dry spells in NEB (12.15% of all events). While circulation anomalies that affect precipitation extremes in the MB have the potential to also affect the precipitation characteristics in NEB, the opposite is not the case. Extreme events in NEB are primarily affected by NE-SW displacement in the SACZ, a mechanism that is of little relevance for precipitation extremes in the MB.

Accumulation and effects of metal mixtures in two seaweed species.

PubMed

Jarvis, Tayler A; Bielmyer-Fraser, Gretchen K

2015-05-01

Metal pollution, due to various anthropogenic sources, may pose a threat to marine ecosystems. Metals can be introduced into food chains via bioaccumulation in primary producers, and may potentially lead to toxic effects. Macroalgae are used as food by a wide variety of organisms, and are therefore extremely important in aquatic systems. This study investigated the accumulation and effects of metals in two macroalgae species. The green seaweed, Ulva lactuca and the red seaweed, Agardhiella subulata were each concurrently exposed to five metals (Cu, Ni, Pb, Cd, and Zn) and U. lactuca was also exposed to each metal individually for 48 h. Metal accumulation in the seaweed was measured, and various photosynthetic parameters were assessed, using imaging pulse amplitude modulated (PAM) fluorometry. Increased metal accumulation occurred in both seaweed species after 48 h exposure to metal mixtures and each metal individually. The distribution of metals in both seaweed species changed with increasing metal exposure concentrations, resulting in higher proportions of Cu and Zn in the metal-exposed groups, as compared to respective controls. Further, U. lactuca accumulated higher concentrations of metals when exposed to each metal individually rather than in metal mixtures, suggesting interactions among metals for uptake and/or bioaccumulation. Significant impairment of photosynthetic parameters in U. lactuca was observed after exposure to 100 and 1000 μg/L metal mixtures, as well as 100 μg/L of either Cd or Cu. These results demonstrate metal bioaccumulation and toxic effects in important primary producers, and may have implications for higher trophic levels. Published by Elsevier Inc.

Successful resection of a giant mediastinal non-seminomatous germ cell tumor showing fluorodeoxyglucose accumulation after neoadjuvant chemotherapy: report of a case.

PubMed

Takada, Kazuki; Morodomi, Yosuke; Okamoto, Tatsuro; Suzuki, Yuzo; Fujishita, Takatoshi; Kitahara, Hirokazu; Shimamatsu, Shinichiro; Kohno, Mikihiro; Kawano, Daigo; Hidaka, Noriko; Nakanishi, Yoichi; Maehara, Yoshihiko

2014-05-01

A 32-year-old man presented with a mediastinal non-seminomatous germ cell tumor showing fluorodeoxyglucose (FDG) accumulation (maximum standardized uptake value = 22.21) and extremely elevated blood alpha-fetoprotein (AFP) level (9203.0 ng/ml). The patient underwent 4 cycles of neoadjuvant chemotherapy (cisplatin, bleomycin, and etoposide), which normalized the AFP level and reduced the tumor size, allowing complete resection without a support of extracorporeal circulation. Despite preoperative positron emission tomography revealing increased FDG uptake in the residual tumor (maximum standardized uptake value = 3.59), the pathologic evaluation revealed that no viable germ cell tumor cells remained. We believe FDG uptake should not be used as a criterion for surgical resection after neoadjuvant chemotherapy. It is appropriate to resect the residual tumor regardless of FDG uptake after induction chemotherapy if a tumor is resectable and the AFP level normalizes.

Rapid sea level rise in the aftermath of a Neoproterozoic snowball Earth

NASA Astrophysics Data System (ADS)

Myrow, P. M.; Lamb, M. P.; Ewing, R. C.

2018-05-01

Earth’s most severe climate changes occurred during global-scale “snowball Earth” glaciations, which profoundly altered the planet’s atmosphere, oceans, and biosphere. Extreme rates of glacioeustatic sea level rise are predicted by the snowball Earth hypothesis, but supporting geologic evidence has been lacking. We use paleohydraulic analysis of wave ripples and tidal laminae in the Elatina Formation, Australia—deposited after the Marinoan glaciation ~635 million years ago—to show that water depths of 9 to 16 meters remained nearly constant for ~100 years throughout 27 meters of sediment accumulation. This accumulation rate was too great to have been accommodated by subsidence and instead indicates an extraordinarily rapid rate of sea level rise (0.2 to 0.27 meters per year). Our results substantiate a fundamental prediction of snowball Earth models of rapid deglaciation during the early transition to a supergreenhouse climate.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Heming, T.A.; Blumhagen, K.A.

The toxicity of thiocyanate (SCN{sup {minus}}) to fish is influenced by the level of fish activity. This is evidenced most dramatically when fish are forced to perform short bouts of strenuous swimming, such as occurs during capture avoidance. Strenuous exercise of SCN{sup {minus}}-exposed fish results in sudden death syndrome, characterized by the immediate onset of convulsions, loss of equilibrium and buoyancy, flaring of the operculum, darkening of the skin epithelium and, within minutes, cessation of ventilation and extreme rigor. The present study was undertaken to examine the accumulation and toxicity of SCN{sup {minus}} in rainbow trout (Salmo gairdneri), in relationmore » to exercise stress and ambient water quality. The effect of a single bout of exercise on blood SCN{sup {minus}} concentration was measured. In addition, effects of water hardness and Cl{sup {minus}} concentration on the accumulation of SCN{sup {minus}} in blood were determined.« less

MXene-Based Electrode with Enhanced Pseudocapacitance and Volumetric Capacity for Power-Type and Ultra-Long Life Lithium Storage.

PubMed

Niu, Shanshan; Wang, Zhiyu; Yu, Mingliang; Yu, Mengzhou; Xiu, Luyang; Wang, Song; Wu, Xianhong; Qiu, Jieshan

2018-04-24

Powerful yet thinner lithium-ion batteries (LIBs) are eagerly desired to meet the practical demands of electric vehicles and portable electronic devices. However, the use of soft carbon materials in current electrode design to improve the electrode conductivity and stability does not afford high volumetric capacity due to their low density and capacity for lithium storage. Herein, we report a strategy leveraging the MXene with superior conductivity and density to soft carbon as matrix and additive material for comprehensively enhancing the power capability, lifespan, and volumetric capacity of conversion-type anode. A kinetics favorable 2D nanohybrid with high conductivity, compact density, accumulated pseudocapacitance, and diffusion-controlled behavior is fabricated by coupling Ti 3 C 2 MXene with high-density molybdenum carbide for fast lithium storage over 300 cycles with high capacities. By replacing the carbonaceous conductive agent with Ti 3 C 2 MXene, the electrodes with better conductivity and dramatically reduced thickens could be further manufactured to achieve 37-40% improvement in capacity retention and ultra-long life of 5500 cycles with extremely slow capacity loss of 0.002% per cycle at high current rates. Ultrahigh volumetric capacity of 2460 mAh cm -3 could be attained by such MXene-based electrodes, highlighting the great promise of MXene in the development of high-performance LIBs.

Snow drought in western U.S. mountains: proximate causes, regional differences, and implications for streamflow and forests

NASA Astrophysics Data System (ADS)

Harpold, A. A.; Dettinger, M. D.; Rajagopal, S.

2017-12-01

Although drought is a recurring problem, recent extreme snow droughts have refocused attention on the interaction of meteorological extremes and snow accumulation in mountains. Only recently have two distinct types of snow drought been defined that help to differentiate a variety of water management implications. Dry snow drought is caused by deficits of winter precipitation and resulting low snow accumulation. Warm snow drought is characterized by temperature extremes causing faster and earlier snowmelt and/or shifts from snow to rain. Here we use 462 Snow Telemetry (SNOTEL) sites in the western U.S. to quantify snow drought as 75% of the long-term average snow water equivalent (SWE). We further subdivide dry snow droughts using SWE to winter precipitation (SWE/P) ratios that were near normal from warm snow droughts where SWE/P ratios were below normal and experienced SWE losses (warm-melt) or received unusual amounts of winter rain (warm-rain snow drought). Using this method we show clear regional patterns in the type and frequency of snow drought. Warm snow droughts on April 1st were most common in all but the highest elevations of the Rocky Mountains. The middle Rocky Mountains sites also experienced less frequent snow drought than the maritime and southern mountains. Warm-melt snow droughts were the primary cause in the Cascade Mountains and the southwestern sites, with only the Sierra Nevada and Wasatch mountains showing consistent warm-rain snow drought. These regional differences limited the predictability of snow drought with simple models of temperature and precipitation. We will discuss the effects of snow drought type and magnitude on streamflow forecasting skill using empirical relationships developed by water management agencies. We expect these types of snow drought to differentially affect streamflow regime and its predictability, as well as forest growth and mortality during and following drought.

Hydropedology of a mildly-arid loess covered area, southern Israel

NASA Astrophysics Data System (ADS)

Yair, Aaron; Goldshleger, Naftali

2016-04-01

Extensive loess covered areas characterize the mildly arid areas of western Israel, where average annual rainfall is 280 mm. Hydrological data available point to a peculiar hydrological behavior of the ephemeral streams. The frequency of channel flow is very high. Four to eight flows are recorded annually. However, even in extreme rain events peak discharges are extremely low representing 0.002-0.005% of the rain amount received by the basin at peak flow. In addition, hydrographs are usually characterized by very steep rising and falling limbs, representative of saturated or nearly saturated areas, extending over a limited part of the watershed. Following this observation we advanced the hypothesis that storm channel runoff originated in the channel itself, with negligible contribution from the adjoining hillslopes. The study was based on two complementary approaches. The hydrological approach was based on the detailed analysis of rainfall-runoff relationships in a small watershed (11 km2). The second approach was based on the toposequence concept. According to this concept soil's properties are closely related to the position of a soil along a slope. Constituents and water lost by the upper part of the slope accumulate in its lower part, which is richer in clay and better leached. Several boreholes were dug along a hillslope 400 m long. Soil samples were collected for chemical and particle size analysis. In addition, samples for soil moisture data were taken following each major rain event. Chemical data obtained show no significant observable difference in the downslope direction. Similar results were also obtained for the particle size distribution and soil moisture content. However, particle size distribution in the active channel reveals very high clay content down to 60 cm. Data obtained lead to two main conclusions. 1. Data presented perfectly fit the concept of "Partial Area Contribution", in its narrow sense, as it presents an extreme case of hydrological discontinuity at the hillslope-channel interface. The high water absorption of the clayey alluvium limits infiltration depth resulting in a very high frequency of channel flow, even at low intensity rain events. The limited wet channel area is responsible for the low peak discharges, and for the steep shapes of most hydrographs. 2. The lack of pedological trends in the downslope direction is an additional indication of the limited connectivity between the hillslopes and the adjoining channel. The limited connectivity is attributed to the prevalence of low rain intensities in the study area. 90-95% of the rains are below 10 mm/hr., whereas final infiltration rates of the loamy-clayey soils are 10-15 mm/hr. higher rain intensities do exist, but there duration is extremely short, drastically limiting flow distances and overland flow contribution to the channel. The present study is also relevant to our understanding of pedological processes in dry-land areas. The high frequency of the intermittent low intensity rainstorms limits runoff generation and flow distances, and casts doubt on the general application of the toposequence approach.

Colluvium supply in humid regions limits the frequency of storm-triggered landslides.

PubMed

Parker, Robert N; Hales, Tristram C; Mudd, Simon M; Grieve, Stuart W D; Constantine, José A

2016-09-30

Shallow landslides, triggered by extreme rainfall, are a significant hazard in mountainous landscapes. The hazard posed by shallow landslides depends on the availability and strength of colluvial material in landslide source areas and the frequency and intensity of extreme rainfall events. Here we investigate how the time taken to accumulate colluvium affects landslide triggering rate in the Southern Appalachian Mountains, USA and how this may affect future landslide hazards. We calculated the failure potential of 283 hollows by comparing colluvium depths to the minimum (critical) soil depth required for landslide initiation in each hollow. Our data show that most hollow soil depths are close to their critical depth, with 62% of hollows having soils that are too thin to fail. Our results, supported by numerical modeling, reveal that landslide frequency in many humid landscapes may be insensitive to projected changes in the frequency of intense rainfall events.

Major coastal impact induced by a 1000-year storm event

PubMed Central

Fruergaard, Mikkel; Andersen, Thorbjørn J.; Johannessen, Peter N.; Nielsen, Lars H.; Pejrup, Morten

2013-01-01

Extreme storms and storm surges may induce major changes along sandy barrier coastlines, potentially causing substantial environmental and economic damage. We show that the most destructive storm (the 1634 AD storm) documented for the northern Wadden Sea within the last thousand years both caused permanent barrier breaching and initiated accumulation of up to several metres of marine sand. An aggradational storm shoal and a prograding shoreface sand unit having thicknesses of up to 8 m and 5 m respectively were deposited as a result of the storm and during the subsequent 30 to 40 years long healing phase, on the eroded shoreface. Our results demonstrate that millennial-scale storms can induce large-scale and long-term changes on barrier coastlines and shorefaces, and that coastal changes assumed to take place over centuries or even millennia may occur in association with and be triggered by a single extreme storm event.

Colluvium supply in humid regions limits the frequency of storm-triggered landslides

PubMed Central

Parker, Robert N.; Hales, Tristram C.; Mudd, Simon M.; Grieve, Stuart W. D.; Constantine, José A.

2016-01-01

Shallow landslides, triggered by extreme rainfall, are a significant hazard in mountainous landscapes. The hazard posed by shallow landslides depends on the availability and strength of colluvial material in landslide source areas and the frequency and intensity of extreme rainfall events. Here we investigate how the time taken to accumulate colluvium affects landslide triggering rate in the Southern Appalachian Mountains, USA and how this may affect future landslide hazards. We calculated the failure potential of 283 hollows by comparing colluvium depths to the minimum (critical) soil depth required for landslide initiation in each hollow. Our data show that most hollow soil depths are close to their critical depth, with 62% of hollows having soils that are too thin to fail. Our results, supported by numerical modeling, reveal that landslide frequency in many humid landscapes may be insensitive to projected changes in the frequency of intense rainfall events. PMID:27688039

Ocular lesions in canine mucopolysaccharidosis I and response to enzyme replacement therapy.

PubMed

Newkirk, Kim M; Atkins, Rosalie M; Dickson, Patti I; Rohrbach, Barton W; McEntee, Michael F

2011-07-11

Mucopolysaccharidosis I (MPS I) is an inherited metabolic disorder resulting from deficiency of α-L-iduronidase and lysosomal accumulation of glycosaminoglycans (GAG) in multiple tissues. Accumulation of GAG in corneal stromal cells causes corneal opacity and reduced vision. The purpose of this study was to determine the extent of ocular GAG accumulation and investigate the effectiveness of intravenous enzyme replacement therapy (ERT) on corneal GAG accumulation in dogs. Ocular tissues were obtained from 58 dogs with mucopolysaccharidosis I and four unaffected controls. Affected dogs received either low-dose ERT, high-dose ERT, or no treatment; some low-dose dogs also received intrathecal treatments. Histologic severity of corneal stromal GAG accumulation was scored. Accumulation of GAG was found in corneal stromal cells and scleral fibroblasts but not in corneal epithelium, endothelium, ciliary epithelium, choroid, retina, retinal pigment epithelium, or optic nerve. Corneal GAG accumulation increased in severity with increasing age. Although low-dose ERT did not significantly reduce corneal stromal GAG accumulation in comparison with untreated animals, high-dose ERT did result in significantly less GAG accumulation compared with the untreated dogs (adjusted P = 0.0143) or the low-dose ERT group (adjusted P = 0.0031). Intrathecal treatments did not significantly affect GAG accumulation. Dogs that began ERT shortly after birth also had significantly less (P < 0.0001) GAG accumulation in the corneal stroma than dogs with a later onset of treatment. These data suggest that high-dose, intravenous ERT is effective at preventing and/or clearing corneal stromal GAG accumulation, particularly if initiated early after birth.

Multi-Index Attribution of Beijing's 2013 "Airpocalypse"

NASA Astrophysics Data System (ADS)

Callahan, C.; Diffenbaugh, N. S.; Horton, D. E.

2017-12-01

Poor air quality causes 2 to 4 million premature deaths per year globally. Individual high-impact events, like Beijing's January 2013 "airpocalypse," have drawn significant attention, as they have demonstrated that short-lived air quality events can have outsized effects on public health and economic vitality. Poor air quality events are the result of emission of pollutants and the meteorological conditions favorable to their accumulation in the near-surface environment. Accumulation occurs when pollutants are not dispersed or scavenged from the atmosphere. The most important meteorological precursors of these conditions include lack of precipitation, low wind speeds, and vertical temperature inversions. Recent reports of extreme air quality, in conjunction with projected future changes in some meteorological air quality indices, raise the question: have the meteorological conditions that shape air quality changed in frequency, intensity, or duration over the observational era? Here we assess whether anthropogenic climate change has altered meteorological conditions conducive to poor air quality. To gain a more complete picture of the effect of anthropogenic change on air quality, we use three indices that quantify poor air quality: the Pollution Potential Index (Zou et al, 2017), which measures temperature inversions and surface wind speeds, the Haze Weather Index (Cai et al, 2017), which measures temperature inversions and mid-level wind speeds, and the Air Stagnation Index (Horton et al, 2014), which measures precipitation, surface wind speeds, and mid-level wind speeds. Drawing on the attribution methods of Diffenbaugh et al (2017), we assess the contribution of observed meteorological trends to the magnitude of air quality events, the return interval of events in the observational record, historical simulated climate, and pre-industrial simulated climate, and the probability of the observed trend in historical and pre-industrial simulated climates. Particular attention is paid to Beijing's January 2013 event, but we also analyze air quality meteorology on a global scale. This work provides a framework for both further understanding the role of climate change in particular air quality events and for expanding the scope of extreme event attribution beyond its current applications.

Quantifying the relationship between extreme air pollution events and extreme weather events

NASA Astrophysics Data System (ADS)

Zhang, Henian; Wang, Yuhang; Park, Tae-Won; Deng, Yi

2017-05-01

Extreme weather events can strongly affect surface air quality, which has become a major environmental factor to affect human health. Here, we examined the relationship between extreme ozone and PM2.5 (particular matter with an aerodynamic diameter less than 2.5 μm) events and the representative meteorological parameters such as daily maximum temperature (Tmax), minimum relative humidity (RHmin), and minimum wind speed (Vmin), using the location-specific 95th or 5th percentile threshold derived from historical reanalysis data (30 years for ozone and 10 years for PM2.5). We found that ozone and PM2.5 extremes were decreasing over the years, reflecting EPA's tightened standards and effort on reducing the corresponding precursor's emissions. Annual ozone and PM2.5 extreme days were highly correlated with Tmax and RHmin, especially in the eastern U.S. They were positively (negatively) correlated with Vmin in urban (rural and suburban) stations. The overlapping ratios of ozone extreme days with Tmax were fairly constant, about 32%, and tended to be high in fall and low in winter. Ozone extreme days were most sensitive to Tmax, then RHmin, and least sensitive to Vmin. The majority of ozone extremes occurred when Tmax was between 300 K and 320 K, RHmin was less than 40%, and Vmin was less than 3 m/s. The number of annual extreme PM2.5 days was highly positively correlated with the extreme RHmin/Tmax days, with correlation coefficient between PM2.5/RHmin highest in urban and suburban regions and the correlation coefficient between PM2.5/Tmax highest in rural area. Tmax has more impact on PM2.5 extreme over the eastern U.S. Extreme PM2.5 days were more likely to occur at low RH conditions in the central and southeastern U.S., especially during spring time, and at high RH conditions in the northern U.S. and the Great Plains. Most extreme PM2.5 events occurred when Tmax was between 300 K and 320 K and RHmin was between 10% and 50%. Extreme PM2.5 days usually occurred when Vmin was under 2 m/s. However, during spring season in the Southeast and fall season in Northwest, high winds were found to accompany extreme PM2.5 days, likely reflecting the impact of fire emissions.

Potent influence of obesity on suppression of plasma B-type natriuretic peptide levels in patients with acute heart failure: An approach using covariance structure analysis.

PubMed

Kinoshita, Koji; Kawai, Makoto; Minai, Kosuke; Ogawa, Kazuo; Inoue, Yasunori; Yoshimura, Michihiro

2016-07-15

Plasma B-type natriuretic peptide (BNP) levels may vary widely among patients with similar stages of heart failure, in whom obesity might be the only factor reducing plasma BNP levels. We investigated the effect of obesity and body mass index (BMI) on plasma BNP levels using serial measurements before and after treatment (pre- and post-BNP and pre- and post-BMI) in patients with acute heart failure. Multiple regression analysis and covariance structure analysis were performed to study the interactions between clinical factors in 372 patients. The pre-BMI was shown as a combination index of obesity and fluid accumulation, whereas the post-BMI was a conventional index of obesity. There was a significant inverse correlation between BMI and BNP in each condition before and after treatment for heart failure. The direct significant associations of the log pre-BNP with the log post-BNP (β: 0.387), the post-BMI (β: -0.043), and the pre-BMI (β: 0.030) were analyzed by using structural equation modeling. The post-BMI was inversely correlated, but importantly, the pre-BMI was positively correlated, with the log pre-BNP, because the pre-BMI probably entailed an element of fluid accumulation. There were few patients with extremely high levels of pre-BNP among those with high post-BMI, due to suppressed secretion of BNP. The low plasma BNP levels in true obesity patients with acute heart failure are of concern, because plasma BNP cannot increase in such patients. Copyright © 2016 The Authors. Published by Elsevier Ireland Ltd.. All rights reserved.

A SNARE-Like Superfamily Protein SbSLSP from the Halophyte Salicornia brachiata Confers Salt and Drought Tolerance by Maintaining Membrane Stability, K+/Na+ Ratio, and Antioxidant Machinery

PubMed Central

Singh, Dinkar; Yadav, Narendra Singh; Tiwari, Vivekanand; Agarwal, Pradeep K.; Jha, Bhavanath

2016-01-01

About 1000 salt-responsive ESTs were identified from an extreme halophyte Salicornia brachiata. Among these, a novel salt-inducible gene SbSLSP (Salicornia brachiata SNARE-like superfamily protein), showed up-regulation upon salinity and dehydration stress. The presence of cis-regulatory motifs related to abiotic stress in the putative promoter region supports our finding that SbSLSP gene is inducible by abiotic stress. The SbSLSP protein showed a high sequence identity to hypothetical/uncharacterized proteins from Beta vulgaris, Spinacia oleracea, Eucalyptus grandis, and Prunus persica and with SNARE-like superfamily proteins from Zostera marina and Arabidopsis thaliana. Bioinformatics analysis predicted a clathrin adaptor complex small-chain domain and N-myristoylation site in the SbSLSP protein. Subcellular localization studies indicated that the SbSLSP protein is mainly localized in the plasma membrane. Using transgenic tobacco lines, we establish that overexpression of SbSLSP resulted in elevated tolerance to salt and drought stress. The improved tolerance was confirmed by alterations in a range of physiological parameters, including high germination and survival rate, higher leaf chlorophyll contents, and reduced accumulation of Na+ ion and reactive oxygen species (ROS). Furthermore, overexpressing lines also showed lower water loss, higher cell membrane stability, and increased accumulation of proline and ROS-scavenging enzymes. Overexpression of SbSLSP also enhanced the transcript levels of ROS-scavenging and signaling enzyme genes. This study is the first investigation of the function of the SbSLSP gene as a novel determinant of salinity/drought tolerance. The results suggest that SbSLSP could be a potential candidate to increase salinity and drought tolerance in crop plants for sustainable agriculture in semi-arid saline soil. PMID:27313584

Investigating heavy-metal hyperaccumulation using Thlaspi caerulescens as a model system.

PubMed

Milner, Matthew J; Kochian, Leon V

2008-07-01

Metal-hyperaccumulating plant species are plants that are endemic to metalliferous soils and are able to tolerate and accumulate metals in their above-ground tissues to very high concentrations. One such hyperaccumulator, Thlaspi caerulescens, has been widely studied for its remarkable properties to tolerate toxic levels of zinc (Zn), cadmium (Cd) and sometimes nickel (Ni) in the soil, and accumulate these metals to very high levels in the shoot. The increased awareness regarding metal-hyperaccumulating plants by the plant biology community has helped spur interest in the possible use of plants to remove heavy metals from contaminated soils, a process known as phytoremediation. Hence, there has been a focus on understanding the mechanisms that metal-hyperaccumulator plant species such as Thlaspi caerulescens employ to absorb, detoxify and store metals in order to use this information to develop plants better suited for the phytoremediation of metal-contaminated soils. In this review, an overview of the findings from recent research aimed at better understanding the physiological mechanisms of Thlaspi caerulescens heavy-metal hyperaccumulation as well as the underlying molecular and genetic determinants for this trait will be discussed. Progress has been made in understanding some of the fundamental Zn and Cd transport physiology in T. caerulescens. Furthermore, some interesting metal-related genes have been identified and characterized in this plant species, and regulation of the expression of some of these genes may be important for hyperaccumulation. Thlaspi caerulescens is a fascinating and useful model system not only for studying metal hyperaccumulation, but also for better understanding micronutrient homeostasis and nutrition. Considerable future research is still needed to elucidate the molecular, genetic and physiological bases for the extreme metal tolerance and hyperaccumulation exhibited by plant species such as T. caerulescens.

Characterization of a novel Y2K-type dehydrin VrDhn1 from Vigna radiata.

PubMed

Lin, Chia-Hui; Peng, Po-Hsin; Ko, Chia-Yun; Markhart, Albert H; Lin, Tsai-Yun

2012-05-01

A novel dehydrin gene (VrDhn1) was isolated from an embryo cDNA library of Vigna radiata (L.) Wilczek (mungbean) variety VC1973A. The intronless VrDhn1 gene encodes a protein belonging to the Y(2)K-type dehydrin family. VrDhn1 protein accumulated in embryos and cotyledons during seed maturation and disappeared 2 days after seed imbibition (DAI). The expression of VrDhn1 mRNA and accumulation of VrDhn1 protein were at high levels in mature seeds, but neither mRNA nor protein was detected in mungbean vegetative tissues under normal growth conditions. The VrDhn1 mRNA level was extremely high in mature seeds and decreased to ∼30% at 1 DAI, and was not detectable at ~7 DAI. Tissue dehydration, salinity and exogenous ABA markedly induced VrDhn1 transcripts in plants as measured by quantitative real-time reverse transcription-PCR (qRT-PCR). VrDhn1 protein was not detected using immunoblots in seedlings under stress treatments. In mature seeds or 1 DAI seedlings, VrDhn1 proteins were immunolocalized in the nucleus and cytoplasm. VrDhn1 exhibited low affinity for non-specific interaction with DNA using electrophoretic mobility shift assays (EMSAs), and the exogenous addition of Zn(2+) or Ni(2+) stimulated interaction. The His-tagged VrDhn1 (30.17 kDa) protein showed a molecular mass of 63.1 kDa on gel filtration, suggesting a dimer form. This is the first report showing that a Y(2)K-type VrDhn1 enters the nucleus and interacts with DNA during seed maturation.

Integrated modeling of the dynamic meteorological and sea surface conditions during the passage of Typhoon Morakot

NASA Astrophysics Data System (ADS)

Lee, Han Soo; Yamashita, Takao; Hsu, John R.-C.; Ding, Fei

2013-01-01

In August 2009, Typhoon Morakot caused massive flooding and devastating mudslides in the southern Taiwan triggered by extremely heavy rainfall (2777 mm in 4 days) which occurred during its passage. It was one of the deadliest typhoons that have ever attacked Taiwan in recent years. In this study, numerical simulations are performed for the storm surge and ocean surface waves, together with dynamic meteorological fields such as wind, pressure and precipitation induced by Typhoon Morakot, using an atmosphere-waves-ocean integrated modelling system. The wave-induced dissipation stress from breaking waves, whitecapping and depth-induced wave breaking, is parameterized and included in the wave-current interaction process, in addition to its influence on the storm surge level in shallow water along the coast of Taiwan. The simulated wind and pressure field captures the characteristics of the observed meteorological field. The spatial distribution of the accumulated rainfall within 4 days, from 00:00 UTC 6 August to 00:00 UTC 10 August 2009, shows similar patterns as the observed values. The 4-day accumulated rainfall of 2777 mm at the A-Li Shan mountain weather station for the same period depicted a high correlation with the observed value of 2780 mm/4 days. The effects of wave-induced dissipation stress in the wave-current interaction resulted in increased surge heights on the relatively shallow western coast of Taiwan, where the bottom slope of the bathymetry ranges from mild to moderate. The results also show that wave-breaking has to be considered for accurate storm surge prediction along the east coast of Taiwan over the narrow bank of surf zone with a high horizontal resolution of the model domain.

Robust increase in extreme summer rainfall intensity during the past four decades observed in China

NASA Astrophysics Data System (ADS)

Xiao, Chan; Wu, Peili; Zhang, Lixia; Song, Lianchun

2016-12-01

Global warming increases the moisture holding capacity of the atmosphere and consequently the potential risks of extreme rainfall. Here we show that maximum hourly summer rainfall intensity has increased by about 11.2% on average, using continuous hourly gauge records for 1971-2013 from 721 weather stations in China. The corresponding event accumulated precipitation has on average increased by more than 10% aided by a small positive trend in events duration. Linear regression of the 95th percentile daily precipitation intensity with daily mean surface air temperature shows a negative scaling of -9.6%/K, in contrast to a positive scaling of 10.6%/K for hourly data. This is made up of a positive scaling below the summer mean temperature and a negative scaling above. Using seasonal means instead of daily means, we find a consistent scaling rate for the region of 6.7-7%/K for both daily and hourly precipitation extremes, about 10% higher than the regional Clausius-Clapeyron scaling of 6.1%/K based on a mean temperature of 24.6 °C. With up to 18% further increase in extreme precipitation under continuing global warming towards the IPCC’s 1.5 °C target, risks of flash floods will exacerbate on top of the current incapability of urban drainage systems in a rapidly urbanizing China.

Extreme ultraviolet index due to broken clouds at a midlatitude site, Granada (southeastern Spain)

NASA Astrophysics Data System (ADS)

Antón, M.; Piedehierro, A. A.; Alados-Arboledas, L.; Wolfran, E.; Olmo, F. J.

2012-11-01

Cloud cover usually attenuates the ultraviolet (UV) solar radiation but, under certain sky conditions, the clouds may produce an enhancement effect increasing the UV levels at surface. The main objective of this paper is to analyze an extreme UV enhancement episode recorded on 16 June 2009 at Granada (southeastern Spain). This phenomenon was characterized by a quick and intense increase in surface UV radiation under broken cloud fields (5-7 oktas) in which the Sun was surrounded by cumulus clouds (confirmed with sky images). Thus, the UV index (UVI) showed an enhancement of a factor 4 in the course of only 30 min around midday, varying from 2.6 to 10.4 (higher than the corresponding clear-sky UVI value). Additionally, the UVI presented values higher than 10 (extreme erythemal risk) for about 20 min running, with a maximum value around 11.5. The use of an empirical model and the total ozone column (TOC) derived from the Global Ozone Monitoring Experiment (GOME) for the period 1995-2011 showed that the value of UVI ~ 11.5 is substantially larger than the highest index that could origin the natural TOC variations over Granada. Finally, the UV erythemal dose accumulated during the period of 20 min with the extreme UVI values under broken cloud fields was 350 J/m2 which surpass the energy required to produce sunburn of the most human skin types.

Aceruloplasminaemia with progressive atrophy without brain iron overload: treatment with oral chelation.

PubMed

Skidmore, F M; Drago, V; Foster, P; Schmalfuss, I M; Heilman, K M; Streiff, R R

2008-04-01

Hereditary aceruloplasminaemia is a disorder of iron metabolism that is characterised by iron accumulation in the brain and other visceral organs. In previously reported cases, individuals with the disorder were noted to have evidence of iron accumulation in the brain. Oral chelating agents have not been used in neurological diseases of iron metabolism. A 54-year-old woman who presented with ataxia, lower extremity spasticity and chorea was evaluated for evidence of the source of neurological dysfunction. Blood studies revealed no detectable ceruloplasmin. Marked iron overload was defined by a liver biopsy, which showed a variegated pattern consistent with a primary cause of iron overload. Review of MRI scans showed progressive brain atrophy without visible iron accumulation occurring over a 5-year period. The history suggested that neurodegeneration was coincident with aggressive oral iron replacement. Oral chelation improved many symptoms. Our findings in this patient suggest that disorders of iron transport such as aceruloplasminaemia can be a cause of neurological symptoms such as chorea and cognitive decline, as well as progressive neurodegeneration in the absence of visible iron on MRI scans. We found that oral iron chelation was effective at improving symptoms.

The opposite end of the attention deficit hyperactivity disorder continuum: genetic and environmental aetiologies of extremely low ADHD traits.

PubMed

Greven, Corina U; Merwood, Andrew; van der Meer, Jolanda M J; Haworth, Claire M A; Rommelse, Nanda; Buitelaar, Jan K

2016-04-01

Although attention deficit hyperactivity disorder (ADHD) is thought to reflect a continuously distributed quantitative trait, it is assessed through binary diagnosis or skewed measures biased towards its high, symptomatic extreme. A growing trend is to study the positive tail of normally distributed traits, a promising avenue, for example, to study high intelligence to increase power for gene-hunting for intelligence. However, the emergence of such a 'positive genetics' model has been tempered for ADHD due to poor phenotypic resolution at the low extreme. Overcoming this methodological limitation, we conduct the first study to assess the aetiologies of low extreme ADHD traits. In a population-representative sample of 2,143 twins, the Strength and Weaknesses of ADHD Symptoms and Normal behaviour (SWAN) questionnaire was used to assess ADHD traits on a continuum from low to high. Aetiological influences on extreme ADHD traits were estimated using DeFries-Fulker extremes analysis. ADHD traits were related to behavioural, cognitive and home environmental outcomes using regression. Low extreme ADHD traits were significantly influenced by shared environmental factors (23-35%) but were not significantly heritable. In contrast, high-extreme ADHD traits showed significant heritability (39-51%) but no shared environmental influences. Compared to individuals with high extreme or with average levels of ADHD traits, individuals with low extreme ADHD traits showed fewer internalizing and externalizing behaviour problems, better cognitive performance and more positive behaviours and positive home environmental outcomes. Shared environmental influences on low extreme ADHD traits may reflect passive gene-environment correlation, which arises because parents provide environments as well as passing on genes. Studying the low extreme opens new avenues to study mechanisms underlying previously neglected positive behaviours. This is different from the current deficit-based model of intervention, but congruent with a population-level approach to improving youth wellbeing. © 2015 The Authors. Journal of Child Psychology and Psychiatry published by John Wiley & Sons Ltd on behalf of Association for Child and Adolescent Mental Health.

Predictive modelling of JT-60SA high-beta steady-state plasma with impurity accumulation

NASA Astrophysics Data System (ADS)

Hayashi, N.; Hoshino, K.; Honda, M.; Ide, S.

2018-06-01

The integrated modelling code TOPICS has been extended to include core impurity transport, and applied to predictive modelling of JT-60SA high-beta steady-state plasma with the accumulation of impurity seeded to reduce the divertor heat load. In the modelling, models and conditions are selected for a conservative prediction, which considers a lower bound of plasma performance with the maximum accumulation of impurity. The conservative prediction shows the compatibility of impurity seeding with core plasma with high-beta (β N  >  3.5) and full current drive conditions, i.e. when Ar seeding reduces the divertor heat load below 10 MW m‑2, its accumulation in the core is so moderate that the core plasma performance can be recovered by additional heating within the machine capability to compensate for Ar radiation. Due to the strong dependence of accumulation on the pedestal density gradient, high separatrix density is important for the low accumulation as well as the low divertor heat load. The conservative prediction also shows that JT-60SA has enough capability to explore the divertor heat load control by impurity seeding in high-beta steady-state plasmas.

Copper and cobalt accumulation in plants: a critical assessment of the current state of knowledge.

PubMed

Lange, Bastien; van der Ent, Antony; Baker, Alan John Martin; Echevarria, Guillaume; Mahy, Grégory; Malaisse, François; Meerts, Pierre; Pourret, Olivier; Verbruggen, Nathalie; Faucon, Michel-Pierre

2017-01-01

This review synthesizes contemporary understanding of copper-cobalt (Cu-Co) tolerance and accumulation in plants. Accumulation of foliar Cu and Co to > 300 μg g -1 is exceptionally rare globally, and known principally from the Copperbelt of Central Africa. Cobalt accumulation is also observed in a limited number of nickel (Ni) hyperaccumulator plants occurring on ultramafic soils around the world. None of the putative Cu or Co hyperaccumulator plants appears to comply with the fundamental principle of hyperaccumulation, as foliar Cu-Co accumulation is strongly dose-dependent. Abnormally high plant tissue Cu concentrations occur only when plants are exposed to high soil Cu with a low root to shoot translocation factor. Most Cu-tolerant plants are Excluders sensu Baker and therefore setting nominal threshold values for Cu hyperaccumulation is not informative. Abnormal accumulation of Co occurs under similar circumstances in the Copperbelt of Central Africa as well as sporadically in Ni hyperaccumulator plants on ultramafic soils; however, Co-tolerant plants behave physiologically as Indicators sensu Baker. Practical application of Cu-Co accumulator plants in phytomining is limited due to their dose-dependent accumulation characteristics, although for Co field trials may be warranted on highly Co-contaminated mineral wastes because of its relatively high metal value. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

High-sensitivity Leak-testing Method with High-Resolution Integration Technique

NASA Astrophysics Data System (ADS)

Fujiyoshi, Motohiro; Nonomura, Yutaka; Senda, Hidemi

A high-resolution leak-testing method named HR (High-Resolution) Integration Technique has been developed for MEMS (Micro Electro Mechanical Systems) sensors such as a vibrating angular-rate sensor housed in a vacuum package. Procedures of the method to obtain high leak-rate resolution were as follows. A package filled with helium gas was kept in a small accumulation chamber to accumulate helium gas leaking from the package. After the accumulation, the accumulated helium gas was introduced into a mass spectrometer in a short period of time, and the flux of the helium gas was measured by the mass spectrometer as a transient phenomenon. The leak-rate of the package was calculated from the detected transient waveform of the mass spectrometer and the accumulation time of the helium gas in the accumulation chamber. Because the density of the helium gas in the vacuum chamber increased and the accumulated helium gas was measured in a very short period of time with the mass spectrometer, the peak strength of the transient waveform became high and the signal to noise ratio was much improved. The detectable leak-rate resolution of the technique reached 1×10-15 (Pa·m3/s). This resolution is 103 times superior to that of the conventional helium vacuum integration method. The accuracy of the measuring system was verified with a standard helium gas leak source. The results were well matched between theoretical calculation based on the leak-rate of the source and the experimental results within only 2% error.

Experimental Evolution of Escherichia coli K-12 at High pH and RpoS Induction.

PubMed

Hamdallah, Issam; Torok, Nadia; Bischof, Katarina M; Majdalani, Nadim; Chadalavada, Sriya; Mdluli, Nonto; Creamer, Kaitlin E; Clark, Michelle; Holdener, Chase; Basting, Preston J; Gottesman, Susan; Slonczewski, Joan L

2018-05-25

Experimental evolution of Escherichia coli K-12 W3110 by serial dilutions for 2,200 generations at high pH extended the range of sustained growth from pH 9.0 to pH 9.3. pH 9.3-adapted isolates showed mutations in DNA-binding regulators and envelope proteins. One population showed an IS1 knockout of phoB (positive regulator of the phosphate regulon). A phoB :: kanR knockout increased growth at high pH. phoB mutants are known to increase production of fermentation acids, which could enhance fitness at high pH. Mutations in pcnB (poly(A) polymerase) also increased growth at high pH. Three out of four populations showed deletions of torI, an inhibitor of TorR, which activates expression of torCAD (trimethylamine N-oxide respiration) at high pH. All populations showed point mutations affecting the stationary-phase sigma RpoS, either in the coding gene or in regulators of RpoS expression. RpoS is required for survival in extreme base. In our microplate assay, rpoS deletion slightly decreased growth at pH 9.1. RpoS protein accumulated faster at pH 9 than at pH 7. The RpoS accumulation at high pH required the presence of one or more antiadapters that block degradation (IraM, IraD, and IraP). Other genes with mutations after high pH evolution encode regulators such as yobG ( mgrB ) (PhoPQ regulator), rpoN (nitrogen starvation sigma), malI , and purR ; as well as envelope proteins ompT and yahO Overall, E. coli evolution at high pH selects for mutations in key transcriptional regulators, including phoB and the stationary-phase sigma RpoS. IMPORTANCE Escherichia coli in its native habitat encounters high pH stress such as that of pancreatic secretions. Experimental evolution over 2,000 generations showed selection for mutations in regulatory factors, such as deletion of the phosphate regulator PhoB and mutations that alter function of the global stress regulator RpoS. RpoS is induced at high pH via multiple mechanisms. Copyright © 2018 American Society for Microbiology.

Contribution of large-scale midlatitude disturbances to hourly precipitation extremes in the United States

NASA Astrophysics Data System (ADS)

Barbero, Renaud; Abatzoglou, John T.; Fowler, Hayley J.

2018-02-01

Midlatitude synoptic weather regimes account for a substantial portion of annual precipitation accumulation as well as multi-day precipitation extremes across parts of the United States (US). However, little attention has been devoted to understanding how synoptic-scale patterns contribute to hourly precipitation extremes. A majority of 1-h annual maximum precipitation (AMP) across the western US were found to be linked to two coherent midlatitude synoptic patterns: disturbances propagating along the jet stream, and cutoff upper-level lows. The influence of these two patterns on 1-h AMP varies geographically. Over 95% of 1-h AMP along the western coastal US were coincident with progressive midlatitude waves embedded within the jet stream, while over 30% of 1-h AMP across the interior western US were coincident with cutoff lows. Between 30-60% of 1-h AMP were coincident with the jet stream across the Ohio River Valley and southeastern US, whereas a a majority of 1-h AMP over the rest of central and eastern US were not found to be associated with either midlatitude synoptic features. Composite analyses for 1-h AMP days coincident to cutoff lows and jet stream show that an anomalous moisture flux and upper-level dynamics are responsible for initiating instability and setting up an environment conducive to 1-h AMP events. While hourly precipitation extremes are generally thought to be purely convective in nature, this study shows that large-scale dynamics and baroclinic disturbances may also contribute to precipitation extremes on sub-daily timescales.

Rain Characteristics and Large-Scale Environments of Precipitation Objects with Extreme Rain Volumes from TRMM Observations

NASA Technical Reports Server (NTRS)

Zhou, Yaping; Lau, William K M.; Liu, Chuntao

2013-01-01

This study adopts a "precipitation object" approach by using 14 years of Tropical Rainfall Measuring Mission (TRMM) Precipitation Feature (PF) and National Centers for Environmental Prediction (NCEP) reanalysis data to study rainfall structure and environmental factors associated with extreme heavy rain events. Characteristics of instantaneous extreme volumetric PFs are examined and compared to those of intermediate and small systems. It is found that instantaneous PFs exhibit a much wider scale range compared to the daily gridded precipitation accumulation range. The top 1% of the rainiest PFs contribute over 55% of total rainfall and have 2 orders of rain volume magnitude greater than those of the median PFs. We find a threshold near the top 10% beyond which the PFs grow exponentially into larger, deeper, and colder rain systems. NCEP reanalyses show that midlevel relative humidity and total precipitable water increase steadily with increasingly larger PFs, along with a rapid increase of 500 hPa upward vertical velocity beyond the top 10%. This provides the necessary moisture convergence to amplify and sustain the extreme events. The rapid increase in vertical motion is associated with the release of convective available potential energy (CAPE) in mature systems, as is evident in the increase in CAPE of PFs up to 10% and the subsequent dropoff. The study illustrates distinct stages in the development of an extreme rainfall event including: (1) a systematic buildup in large-scale temperature and moisture, (2) a rapid change in rain structure, (3) explosive growth of the PF size, and (4) a release of CAPE before the demise of the event.

The influence of particles recycling on the geochemistry of sediments in a large tropical dam lake in the Amazonian region, Brazil

NASA Astrophysics Data System (ADS)

Fonseca, Rita; Pinho, Catarina; Oliveira, Manuela

2016-12-01

As a result of over-erosion of soils, the fine particles, which contain the majority of nutrients, are easily washed away from soils, which become deficient in a host of components, accumulating in lakes. On one hand, the accumulation of nutrients-rich sediments are a problem, as they affect the quality of the overlying water and decrease the water storage capacity of the system; on the other hand, sediments may constitute an important resource, as they are often extremely rich in organic and inorganic nutrients in readily available forms. In the framework of an extensive work on the use of rock related materials to enhance the fertility of impoverish soils, this study aimed to evaluate the role on the nutrients cycle, of particles recycling processes from the watershed to the bottom of a large dam reservoir, at a wet tropical region under high weathering conditions. The study focus on the mineralogical transformations that clay particles undergo from the soils of the drainage basin to their final deposition within the reservoir and their influence in terms of the geochemical characteristics of sediments. We studied the bottom sediments that accumulate in two distinct seasonal periods in Tucuruí reservoir, located in the Amazonian Basin, Brazil, and soils from its drainage basin. The surface layers of sediments in twenty sampling points with variable depths, are representative of the different morphological sections of the reservoir. Nineteen soil samples, representing the main soil classes, were collected near the margins of the reservoir. Sediments and soils were subjected to the same array of physical, mineralogical and geochemical analyses: (1) texture, (2) characterization and semi-quantification of the clay fraction mineralogy and (3) geochemical analysis of the total concentration of major elements, organic compounds (organic C and nitrogen), soluble fractions of nutrients (P and K), exchangeable fractions (cation exchange capacity, exchangeable bases and acidity) and pH(H2O). There is a remarkable homogeneity in the sedimentary distribution along the reservoir in terms of the texture and mineralogy of the clay fraction and of the chemistry of the total, soluble and exchangeable phases. These observations contrast with the physical, morphological and chemical heterogeneity of the soils and the setting lithology. Most of the sediments has a higher contribution of fine-grained material and the mineralogy of the clay fraction is dominated by kaolinite in soils and kaolinite and illite in sediments, followed by lesser amounts of gibbsite, goethite, and metahaloisite and by small/vestigial contents of chlorite and smectite. The sediments are mainly inherited from the watershed but there exist marked differences between the accumulated sediments and their parent materials. These differences mainly come from the selective erosion of fine-grained particles and the extreme climatic conditions which enhance complex transformations of mineralogical and chemical nature. Compared with the parental soils, the reservoir sediments show the following differences: (1) enrichment in fine-grained and less dense inorganic particles, (2) aggradative mineralogical transformations, including enrichment in clay minerals with higher cationic adsorption and exchange capacity, (3) degradation of the crystalline structure of Fe- and Al-oxides (goethite, gibbsite), (4) increase in easily leached elements (Mg, Ca, P, K, Na) and decrease in chemically less mobile elements (Si, Fe) and (5) higher contents of organic carbon, nitrogen, and soluble forms of P and K, mainly concentrated in the clay fraction. These transformations are extremely important in the nutrients cycle, denoting that sediments represent an efficient sink for nutrients from the over-erosion of soils. Mineral and organic compounds can permanently or temporarily sequester these nutrients, recycling them and enhancing their availability through the slow release of components from relatively loose crystal structures. These processes can easily explain the enrichment in soluble and exchangeable forms of elements such as P, K, Ca or Mg. This study conclude that the particles recycling in a large tropical dam reservoir which receives high fluxes of allochthonous nutrients, has an important role in the good quality of sediments for agricultural use and in the profitable use of this technology to recover depleted soils in remediation projects in regions near large hydroelectric plants.

Comparison and applicability of landslide susceptibility models based on landslide ratio-based logistic regression, frequency ratio, weight of evidence, and instability index methods in an extreme rainfall event

NASA Astrophysics Data System (ADS)

Wu, Chunhung

2016-04-01

Few researches have discussed about the applicability of applying the statistical landslide susceptibility (LS) model for extreme rainfall-induced landslide events. The researches focuses on the comparison and applicability of LS models based on four methods, including landslide ratio-based logistic regression (LRBLR), frequency ratio (FR), weight of evidence (WOE), and instability index (II) methods, in an extreme rainfall-induced landslide cases. The landslide inventory in the Chishan river watershed, Southwestern Taiwan, after 2009 Typhoon Morakot is the main materials in this research. The Chishan river watershed is a tributary watershed of Kaoping river watershed, which is a landslide- and erosion-prone watershed with the annual average suspended load of 3.6×107 MT/yr (ranks 11th in the world). Typhoon Morakot struck Southern Taiwan from Aug. 6-10 in 2009 and dumped nearly 2,000 mm of rainfall in the Chishan river watershed. The 24-hour, 48-hour, and 72-hours accumulated rainfall in the Chishan river watershed exceeded the 200-year return period accumulated rainfall. 2,389 landslide polygons in the Chishan river watershed were extracted from SPOT 5 images after 2009 Typhoon Morakot. The total landslide area is around 33.5 km2, equals to the landslide ratio of 4.1%. The main landslide types based on Varnes' (1978) classification are rotational and translational slides. The two characteristics of extreme rainfall-induced landslide event are dense landslide distribution and large occupation of downslope landslide areas owing to headward erosion and bank erosion in the flooding processes. The area of downslope landslide in the Chishan river watershed after 2009 Typhoon Morakot is 3.2 times higher than that of upslope landslide areas. The prediction accuracy of LS models based on LRBLR, FR, WOE, and II methods have been proven over 70%. The model performance and applicability of four models in a landslide-prone watershed with dense distribution of rainfall-induced landslide are interesting and meaningful. Eight landslide-related factors, including elevation, slope, aspect, geology, accumulated rainfall during 2009 Typhoon Morakot, landuse, distance to the fault, and distance to the rivers, were considered in this research. The research builds and compares the difference of the LS maps based on four methods. The average LS value from each method is 0.27 for LRBLR, 0.368 for FR, 0.553 for WOE, and 0.498 for II. The correlation analysis was conducted to identify similarities between the four LS maps. The correlation coefficients are 0.913, 0.829, 0.930, 0.756, 0.729, and 0.652 for the LRBLR vs FR, LRBLR vs WOE, FR vs WOE, LRBLR vs II, FR vs II, and WOE vs II. The research compares the model performance of four LS maps by calculating the AUC value (area under the ROC curve) and ACR value (average correct-predicted ratio). The AUC values of LS maps based on LRBLR, FR, WOE, and II methods are 0.819, 0.819, 0.822 and 0.785. The ACR values of LS maps based on LRBLR, FR, WOE, and II methods are 75.1%, 73.7%, 68.4%, and 64.2%. The results indicate that the model performance based on LRBLR method in an extreme rainfall-landslide event is better than that based on the other three methods.

Pseudomonas moraviensis subsp. stanleyae, a bacterial endophyte of hyperaccumulator Stanleya pinnata, is capable of efficient selenite reduction to elemental selenium under aerobic conditions.

PubMed

Staicu, L C; Ackerson, C J; Cornelis, P; Ye, L; Berendsen, R L; Hunter, W J; Noblitt, S D; Henry, C S; Cappa, J J; Montenieri, R L; Wong, A O; Musilova, L; Sura-de Jong, M; van Hullebusch, E D; Lens, P N L; Reynolds, R J B; Pilon-Smits, E A H

2015-08-01

To identify bacteria with high selenium tolerance and reduction capacity for bioremediation of wastewater and nanoselenium particle production. A bacterial endophyte was isolated from the selenium hyperaccumulator Stanleya pinnata (Brassicaceae) growing on seleniferous soils in Colorado, USA. Based on fatty acid methyl ester analysis and multi-locus sequence analysis (MLSA) using 16S rRNA, gyrB, rpoB and rpoD genes, the isolate was identified as a subspecies of Pseudomonas moraviensis (97.3% nucleotide identity) and named P. moraviensis stanleyae. The isolate exhibited extreme tolerance to SeO3(2-) (up to 120 mmol l(-1)) and SeO4(2-) (>150 mmol l(-1)). Selenium oxyanion removal from growth medium was measured by microchip capillary electrophoresis (detection limit 95 nmol l(-1) for SeO3(2-) and 13 nmol l(-1) for SeO4(2-)). Within 48 h, P. moraviensis stanleyae aerobically reduced SeO3(2-) to red Se(0) from 10 mmol l(-1) to below the detection limit (removal rate 0.27 mmol h(-1) at 30 °C); anaerobic SeO3(2-) removal was slower. No SeO4(2-) removal was observed. Pseudomonas moraviensis stanleyae stimulated the growth of crop species Brassica juncea by 70% with no significant effect on Se accumulation. Pseudomonas moraviensis stanleyae can tolerate extreme levels of selenate and selenite and can deplete high levels of selenite under aerobic and anaerobic conditions. Pseudomonas moraviensis subsp. stanleyae may be useful for stimulating plant growth and for the treatment of Se-laden wastewater. © 2015 The Society for Applied Microbiology.

Oxygen isotope compositions of selected laramide-tertiary granitoid stocks in the Colorado Mineral Belt and their bearing on the origin of climax-type granite-molybdenum systems

USGS Publications Warehouse

Hannah, J.L.; Stein, H.J.

1986-01-01

Quartz phenocrysts from 31 granitoid stocks in the Colorado Mineral Belt yield ??18O values less than 10.4???, with most values between 9.3 and 10.4???. An average magmatic value of about 8.5??? is suggested. The stocks resemble A-type granites; these data support magma genesis by partial melting of previously depleted, fluorine-enriched, lower crustal granulites, followed by extreme differentiation and volatile evolution in the upper crust. Subsolidus interaction of isotopically light water with stocks has reduced most feldspar and whole rock ??18O values. Unaltered samples from Climax-type molybdenumbearing granites, however, show no greater isotopic disturbance than samples from unmineralized stocks. Although meteoric water certainly played a role in post-mineralization alteration, particularly in feldspars, it is not required during high-temperature mineralization processes. We suggest that slightly low ??18O values in some vein and replacement minerals associated with molybdenum mineralization may have resulted from equilibration with isotopically light magmatic water and/or heavy isotope depletion of the ore fluid by precipitation of earlier phases. Accumulation of sufficient quantities of isotopically light magmatic water to produce measured depletions of 18O requires extreme chemical stratification in a large magma reservoir. Upward migration of a highly fractionated, volatile-rich magma into a small apical Climax-type diapir, including large scale transport of silica, alkalis, molybdenum, and other vapor soluble elements, may occur with depression of the solidus temperature and reduction of magma viscosity by fluorine. Climax-type granites may provide examples of 18O depletion in magmatic systems without meteoric water influx. ?? 1986 Springer-Verlag.

Survival of rapidly fluctuating natural low winter temperatures by High Arctic soil invertebrates.

PubMed

Convey, Peter; Abbandonato, Holly; Bergan, Frode; Beumer, Larissa Teresa; Biersma, Elisabeth Machteld; Bråthen, Vegard Sandøy; D'Imperio, Ludovica; Jensen, Christina Kjellerup; Nilsen, Solveig; Paquin, Karolina; Stenkewitz, Ute; Svoen, Mildrid Elvik; Winkler, Judith; Müller, Eike; Coulson, Stephen James

2015-12-01

The extreme polar environment creates challenges for its resident invertebrate communities and the stress tolerance of some of these animals has been examined over many years. However, although it is well appreciated that standard air temperature records often fail to describe accurately conditions experienced at microhabitat level, few studies have explicitly set out to link field conditions experienced by natural multispecies communities with the more detailed laboratory ecophysiological studies of a small number of 'representative' species. This is particularly the case during winter, when snow cover may insulate terrestrial habitats from extreme air temperature fluctuations. Further, climate projections suggest large changes in precipitation will occur in the polar regions, with the greatest changes expected during the winter period and, hence, implications for the insulation of overwintering microhabitats. To assess survival of natural High Arctic soil invertebrate communities contained in soil and vegetation cores to natural winter temperature variations, the overwintering temperatures they experienced were manipulated by deploying cores in locations with varying snow accumulation: No Snow, Shallow Snow (30 cm) and Deep Snow (120 cm). Air temperatures during the winter period fluctuated frequently between +3 and -24 °C, and the No Snow soil temperatures reflected this variation closely, with the extreme minimum being slightly lower. Under 30 cm of snow, soil temperatures varied less and did not decrease below -12 °C. Those under deep snow were even more stable and did not decline below -2 °C. Despite these striking differences in winter thermal regimes, there were no clear differences in survival of the invertebrate fauna between treatments, including oribatid, prostigmatid and mesostigmatid mites, Araneae, Collembola, Nematocera larvae or Coleoptera. This indicates widespread tolerance, previously undocumented for the Araneae, Nematocera or Coleoptera, of both direct exposure to at least -24 °C and the rapid and large temperature fluctuations. These results suggest that the studied polar soil invertebrate community may be robust to at least one important predicted consequence of projected climate change. Copyright © 2014 Elsevier Ltd. All rights reserved.

Habitability: Where to look for life? Halophilic habitats: Earth analogs to study Mars habitability

NASA Astrophysics Data System (ADS)

Gómez, F.; Rodríguez-Manfredi, J. A.; Rodríguez, N.; Fernández-Sampedro, M.; Caballero-Castrejón, F. J.; Amils, R.

2012-08-01

Oxidative stress, high radiation doses, low temperature and pressure are parameters which made Mars's surface adverse for life. Those conditions found on Mars surface are harsh conditions for life to deal with. Life, as we know it on Earth, needs several requirements for its establishment but, the only "sine qua nom" element is water. Extremophilic microorganisms widened the window of possibilities for life to develop in the universe, and as a consequence on Mars. Recently reported results in extreme environments indicate the possibility of presence of "oasys" for life in microniches due to water deliquescence in salts deposits. The compilation of data produced by the ongoing missions (Mars Global Surveyor, Mars Odyssey, Mars Express and Mars Exploration Rover Opportunity) offers a completely different view from that reported by Viking missions: signs of an early wet Mars and rather recent volcanic activity. The discovery of important accumulations of sulfates, and the existence of iron minerals like jarosite, goethite and hematite in rocks of sedimentary origin has allowed specific terrestrial models related with this type of mineralogy to come into focus. Río Tinto (Southwestern Spain, Iberian Pyritic Belt) is an extreme acidic environment, product of the chemolithotrophic activity of microorganisms that thrive in the massive pyrite-rich deposits of the Iberian Pyritic Belt. The high concentration of ferric iron and sulfates, products of the metabolism of pyrite, generate a collection of minerals, mainly gypsum, jarosite, goethite and hematites, all of which have been detected in different regions of Mars. Some particular protective environments or elements could house organic molecules or the first bacterial life forms on Mars surface. Terrestrial analogs could help us to afford its comprehension. We are reporting here some preliminary studies about endolithic niches inside salt deposits used by phototrophs for taking advantage of sheltering particular light wavelengths. These acidic salts deposits located in Río Tinto shelter life forms which are difficult to localize by eye. Techniques for its localization and study during space missions are needed to develop. Extreme environments are good scenarios where to test and train those techniques and where hypothetical astrobiological space missions could be simulated for increasing possibilities of micro niches identification.

Potential compensation of hydrological extremes in headwaters: case study of upper Vltava River basin, Šumava Mts., Czechia

NASA Astrophysics Data System (ADS)

Kocum, Jan; Janský, Bohumír.; Česák, Julius

2010-05-01

Increasing frequency of catastrophic flash floods and extreme droughts in recent years results in an urgent need of solving of flood protection questions and measures leading to discharge increase in dry periods. Flattening of discharge call for the use of untraditional practices as a suitable complement to classical engineering methods. These measures could be represented by gradual increase of river catchment retention capacity in headstream areas. Very favorable conditions for this research solution are concentrated to the upper part of Otava River basin (Vltava River left tributary, Šumava Mts., southwestern Czechia) representing the core zone of a number of extreme floods in Central Europe and the area with high peat land proportion. A number of automatic ultrasound and hydrostatic pressure water level gauges, climatic stations and precipitation gauges and utilization of modern equipment and methods were used in chosen experimental catchments to assess the landscape retention potential and to find out rainfall-runoff relations in this area. Successively, the detailed analysis of peat land hydrological function was carried out. The peat bogs influence on runoff conditions were assessed by thorough comparison of runoff regimes in subcatchments with different peat land proportion. The peat bog influence on hydrological process can be considered also with respect to its affecting of water quality. Therefore, hydrological monitoring was completed by ion, carbon (TOC) and oxygen isotopes balance observing within periods of high or low discharges in order to precise runoff phases separation by means of anion deficiency. Pedological survey of different soil types and textures was carried out to precise the estimation of its water capacity. Detailed analyses of extreme runoff ascending and descending phases and minimum discharges in profiles closing several subcatchments with different physical-geographic conditions show higher peak flow frequency and their shorter reaction to causal amount of precipitation in the case of highly peaty areas, therefore more distinct runoff variability of streams draining peat land localities. These findings were affirmed by geochemical approach laboratory outcomes within the meaning of significant contribution of runoff from peat lands to the total runoff during extreme flood situations. An important component of rainfall-runoff process in source areas of czech rivers represented by snow conditions was analyses very in detail by means of monitoring of snow cover height and its water equivalent in chosen experimental catchments. Outcomes of this study should markedly help with significant precising of estimation of water storage retained in a snow cover. Consecutive runoff simulations using mathematical techniques would then improve a hydrological forecast. In terms of present dyking of former channels draining peat land represented by so called peat bog revitalization partial findings refer to positive effect during mean runoff situations but their considerably negative influence on runoff process in cases of extremely high discharges. In order to achieve retention potential enhancement in source areas of czech rivers an evaluation of possible former accumulative reservoirs (used for wood floating in former times) restoration which could function for example as dry (green) polders should be considered. The system of such small storage bins could function as an alternative and supplement to greater dam reservoirs. Possible spaces for water retention are measured by geodetic total station and modelled by suitable methods in GIS software. Existing outcomes advert to the fact that the effectiveness of such reservoir system would not have to be neglecting. By implementation of these unforceable measures realized in river headstream areas it could be contributed to reduction of peak flows and to increase of water resources during extreme droughts in future.

Predictive modeling of crystal accumulation in high-level waste glass melters processing radioactive waste

DOE Office of Scientific and Technical Information (OSTI.GOV)

Matyáš, Josef; Gervasio, Vivianaluxa; Sannoh, Sulaiman E.

We present that the effectiveness of high-level waste vitrification at Hanford's Waste Treatment and Immobilization Plant may be limited by precipitation/accumulation of spinel crystals [(Fe, Ni, Mn, Zn)(Fe, Cr) 2O 4] in the glass discharge riser of Joule-heated ceramic melters during idling. These crystals do not affect glass durability; however, if accumulated in thick layers, they can clog the melter and prevent discharge of molten glass into canisters. To address this problem, an empirical model was developed that can predict thicknesses of accumulated layers as a function of glass composition. This model predicts well the accumulation of single crystals and/ormore » small-scale agglomerates, but excessive agglomeration observed in high-Ni-Fe glass resulted in an underprediction of accumulated layers, which gradually worsened over time as an increased number of agglomerates formed. In conclusion, the accumulation rate of ~53.8 ± 3.7 μm/h determined for this glass will result in a ~26 mm-thick layer after 20 days of melter idling.« less

Predictive modeling of crystal accumulation in high-level waste glass melters processing radioactive waste

DOE PAGES

Matyáš, Josef; Gervasio, Vivianaluxa; Sannoh, Sulaiman E.; ...

2017-08-30

We present that the effectiveness of high-level waste vitrification at Hanford's Waste Treatment and Immobilization Plant may be limited by precipitation/accumulation of spinel crystals [(Fe, Ni, Mn, Zn)(Fe, Cr) 2O 4] in the glass discharge riser of Joule-heated ceramic melters during idling. These crystals do not affect glass durability; however, if accumulated in thick layers, they can clog the melter and prevent discharge of molten glass into canisters. To address this problem, an empirical model was developed that can predict thicknesses of accumulated layers as a function of glass composition. This model predicts well the accumulation of single crystals and/ormore » small-scale agglomerates, but excessive agglomeration observed in high-Ni-Fe glass resulted in an underprediction of accumulated layers, which gradually worsened over time as an increased number of agglomerates formed. In conclusion, the accumulation rate of ~53.8 ± 3.7 μm/h determined for this glass will result in a ~26 mm-thick layer after 20 days of melter idling.« less

Heliospheric and Local Interstellar Space Weathering Environments of Extreme Kuiper Belt Objects

NASA Astrophysics Data System (ADS)

Cooper, J. F.; Sturner, S. J.

2017-12-01

Since the first direct detection of a Kuiper Belt Object (KBO), (15760) 1992 QB1, in 1992, observational evidence via direct detection has accumulated for thousands (and via inference for hundreds of thousands) of small to large icy bodies that populate the solar system from within the supersonic heliosphere out into the local interstellar medium (LISM). These objects have mainly been discovered when within the heliosphere but the orbits of the more extreme KBOs, fifteen percent of the total known KBO population, take them out into the heliosheath and about half of these continue further out into the LISM. Continuing observations will inevitably increase the known inventory of extreme KBOs, possibly including a few that may be accessible as near-encounter targets for a future interstellar probe mission directed beyond 200 AU into the upstream LISM. Here we review the known population of extreme KBOs and address the properties of the heliospheric and LISM environments that could potentially affect object visibility and surface composition. The twin Voyager spacecraft are our present source of in-situ measurements for the plasma and energetic particle environments, except that there are no plasma data from Voyager 1. Voyager 1 and 2 are now respectively in the LISM and the heliosheath after earlier passing through the outer regions of the supersonic heliosphere upstream of the solar wind termination shock. The Voyager data coverage is complemented by energetic neutral atom (ENA) measurements of the Interstellar Background Explorer (IBEX) and Cassini Orbiter spacecraft that can be used to infer proton flux spectra from models of ENA production in the outer heliosphere. High radiation background in the LISM has precluded sub-MeV energetic ion measurements by Voyager 1, so we use limits from Cummings et al. (ApJ, 2016) for molecular cloud ionization. This would be an important energy region to cover with interstellar probe measurements. These sources of plasma and energetic particle flux measurements are used to estimate values for space weathering parameters including surface energy flux and pressure, dosage vs. depth profiles for chemical processing of mixed ice surfaces, and ion sputtering rates. We further consider other space weathering processes including ultraviolet irradiation and meteoritic impact gardening.

Beach ridge sedimentology: field observation and palaeoenvironmental interpretation for Anegada Island, British Virgin Islands.

NASA Astrophysics Data System (ADS)

Cescon, Anna Lisa; Cooper, J. Andrew G.; Jackson, Derek W. T.

2014-05-01

Beach ridge landforms have been observed in different environments and in settings that range from polar to tropical. Their stratigraphy and sedimentology has received a limited amount of discussion in the literature (Tamura, 2012). In coastal geomorphology a beach ridge can be seen as a transitional deposit between onshore and offshore environments. They are regarded as representing high level wave action along a coastline. In the Caribbean the origin of beach ridges has been variously attributed to one of three extreme wave events: extreme swell, extreme storm or tsunami waves. Beach ridges are arranged in beach ridge plains where there is succession of the landforms and can be several kilometres long. Beach ridge accumulation is not continuous and the coast shows alternating accretion and erosion periods. The use of beach ridges as palaeostorm archives is therefore not straightforward. The temporal continuity of beach ridge formation is being assessed on the beach ridge plains of Anegada, British Virgin Islands (Lesser Antilles). This carbonate platform surrounded by a fringing reef contains two beach ridge plains. There are more than 30 ridges in the Atlantic facing- coast and around 10 in the south, Caribbean- facing coast. The sediments of the modern beaches are dominated by the sand fraction and are 100% biogenic origin due to the isolation of Anegada from terrestrial sediment sources. The beach ridge sections have been studied in different area of Anegada beach ridge plains and present low angle seaward-dipping bedding. The sand fraction is dominant in the stratigraphy with a few intact shells. At only one site were coral pebbles deposited in association with the sand fraction. Aeolian deposits represent the upper part of the beach ridges and reflect the stabilization of the beach ridges with ongoing accretion. The sedimentology of the contemporary beach and dunes will be discussed in terms of their implications for understanding beach ridge genesis and its relationship to extreme wave events. Tamura, T., 2012. Beach ridges and prograded beach deposits as palaeoenvironment records. Earth-Science Reviews, 114, pp. 279-297.

Unlocking the Barite Paleoproductivity Proxy: Using a New Barite Extraction Method to Understand Productivity Trends During the Eocene Greenhouse

NASA Astrophysics Data System (ADS)

House, B. M.; Norris, R. D.

2017-12-01

The Early Eocene Climatic Optimum (EECO) around 50 Ma was a sustained period of extreme global warmth with ocean bottom water temperatures of up to 12° C. The marine biologic response to such climatic extremes is unclear, however, in part because proxies that integrate ecosystem-wide productivity signals are scarce. While the accumulation of marine barite (BaSO4) is one such proxy, its applicability has remained limited due to the difficulty in reliably quantifying barite. Discrete measurements of barite content in marine sediments are laborious, and indirect estimates provide unclear results. We have developed a fast, high-throughput method for reliable measurement of barite content that relies on selective extraction of barite rather than sample digestion and quantification of remaining barite. Tests of the new method reveal that it gives the expected results for a wide variety of sediment types and can quantitatively extract 10-100 times the amount of barite typically encountered in natural sediments. Altogether, our method provides an estimated ten-fold increase in analysis efficiency over current sample digestion methods and also works reliably on small ( 1 g or less) sediment samples. Furthermore, the instrumentation requirements of this method are minor, so samples can be analyzed in shipboard labs to generate real-time paleoproductivity records during coring expeditions. Because of the magnitude of throughput improvement, this new technique will permit the generation of large datasets needed to address previously intractable paleoclimate and paleoceanographic questions. One such question is how export productivity changes during climatic extremes. We used our new method to analyze globally distributed sediment cores to determine if the EECO represented a period of anomalous export productivity either due to higher rates of primary production or more vigorous heterotrophic metabolisms. An increase in export productivity could provide a mechanism for exiting periods of extreme warmth, and understanding the interplay between temperature, atmospheric CO2 levels, and export productivity during the EECO will help clarify how the marine biologic system functions as a whole.

Investigating Extreme Heat and Humidity in the Northeast United States from a Joint Hazard Perspective

NASA Astrophysics Data System (ADS)

Horton, R. M.; Coffel, E.; Kushnir, Y.

2014-12-01

Recent years have seen an increasing focus on extreme high temperature events, as our understanding of societal vulnerability to such extremes has grown. Less climate research has been devoted to heat indices that consider the joint hazard posed by high temperatures and high humidity, even though heat indices are being prioritized by utility providers and public health officials. This paper evaluates how well CMIP5 models are able to reproduce the large-scale features and surface conditions associated with joint high heat and humidity events in the Northeast U.S. Projected changes in heat indices are also shown both for the full set of CMIP5 models and for a subset of models that best reproduce the statistics of historical high heat index events. The importance of considering the relationship between 1) temperature and humidity extremes and 2) projected changes in extreme temperature and humidity extremes, rather than investigating each variable independently, will be emphasized. Potential impacts of the findings on human mortality and energy consumption will be briefly discussed.

Genotype variations in cadmium and lead accumulations of leafy lettuce (Lactuca sativa L.) and screening for pollution-safe cultivars for food safety.

PubMed

Zhang, Kun; Yuan, Jiangang; Kong, Wei; Yang, Zhongyi

2013-06-01

Heavy-metals in polluted soils can accumulate in plants and threaten crop safety. To evaluate the risk of heavy-metal pollution in leafy lettuce (Lactuca sativa L.), two pot experiments were conducted to investigate Cd and Pb accumulation and transfer potential in 28 cultivars of lettuce and to screen for low-Cd and low-Pb accumulative cultivars. In the three treatments, 5.2-fold, 4.8-fold and 4.8-fold differences in the shoot Cd concentration were observed between the cultivars with the highest and the lowest Cd concentrations, respectively. This genotype variation was sufficiently large to identify low-Cd accumulative genotypes to reduce Cd contamination in food. Cadmium accumulation in the low-Cd accumulative genotypes was significantly positively correlated with Pb accumulation. At the cultivar level, Cd and Pb accumulation in lettuce was stable and genotype-dependent. High Pb soil levels did not affect shoot Cd accumulation in lettuce. Lettuce was concluded to be at high risk for Cd pollution and low risk for Pb pollution. Among the tested cultivars, cvs. SJGT, YLGC, N518, and KR17 had the lowest Cd and Pb accumulation abilities in shoots and are thus important parental material for breeding pollution-safe cultivars to minimize Cd and Pb accumulation.

Application of Radar-Rainfall Estimates to Probable Maximum Precipitation in the Carolinas

NASA Astrophysics Data System (ADS)

England, J. F.; Caldwell, R. J.; Sankovich, V.

2011-12-01

Extreme storm rainfall data are essential in the assessment of potential impacts on design precipitation amounts, which are used in flood design criteria for dams and nuclear power plants. Probable Maximum Precipitation (PMP) from National Weather Service Hydrometeorological Report 51 (HMR51) is currently used for design rainfall estimates in the eastern U.S. The extreme storm database associated with the report has not been updated since the early 1970s. In the past several decades, several extreme precipitation events have occurred that have the potential to alter the PMP values, particularly across the Southeast United States (e.g., Hurricane Floyd 1999). Unfortunately, these and other large precipitation-producing storms have not been analyzed with the detail required for application in design studies. This study focuses on warm-season tropical cyclones (TCs) in the Carolinas, as these systems are the critical maximum rainfall mechanisms in the region. The goal is to discern if recent tropical events may have reached or exceeded current PMP values. We have analyzed 10 storms using modern datasets and methodologies that provide enhanced spatial and temporal resolution relative to point measurements used in past studies. Specifically, hourly multisensor precipitation reanalysis (MPR) data are used to estimate storm total precipitation accumulations at various durations throughout each storm event. The accumulated grids serve as input to depth-area-duration calculations. Individual storms are then maximized using back-trajectories to determine source regions for moisture. The development of open source software has made this process time and resource efficient. Based on the current methodology, two of the ten storms analyzed have the potential to challenge HMR51 PMP values. Maximized depth-area curves for Hurricane Floyd indicate exceedance at 24- and 72-hour durations for large area sizes, while Hurricane Fran (1996) appears to exceed PMP at large area sizes for short-duration, 6-hour storms. Utilizing new methods and data, however, requires careful consideration of the potential limitations and caveats associated with the analysis and further evaluation of the newer storms within the context of historical storms from HMR51. Here, we provide a brief background on extreme rainfall in the Carolinas, along with an overview of the methods employed for converting MPR to depth-area relationships. Discussion of the issues and limitations, evaluation of the various techniques, and comparison to HMR51 storms and PMP values are also presented.

Effects of Extreme Temperatures on Cause-Specific Cardiovascular Mortality in China

PubMed Central

Wang, Xuying; Li, Guoxing; Liu, Liqun; Westerdahl, Dane; Jin, Xiaobin; Pan, Xiaochuan

2015-01-01

Objective: Limited evidence is available for the effects of extreme temperatures on cause-specific cardiovascular mortality in China. Methods: We collected data from Beijing and Shanghai, China, during 2007–2009, including the daily mortality of cardiovascular disease, cerebrovascular disease, ischemic heart disease and hypertensive disease, as well as air pollution concentrations and weather conditions. We used Poisson regression with a distributed lag non-linear model to examine the effects of extremely high and low ambient temperatures on cause-specific cardiovascular mortality. Results: For all cause-specific cardiovascular mortality, Beijing had stronger cold and hot effects than those in Shanghai. The cold effects on cause-specific cardiovascular mortality reached the strongest at lag 0–27, while the hot effects reached the strongest at lag 0–14. The effects of extremely low and high temperatures differed by mortality types in the two cities. Hypertensive disease in Beijing was particularly susceptible to both extremely high and low temperatures; while for Shanghai, people with ischemic heart disease showed the greatest relative risk (RRs = 1.16, 95% CI: 1.03, 1.34) to extremely low temperature. Conclusion: People with hypertensive disease were particularly susceptible to extremely low and high temperatures in Beijing. People with ischemic heart disease in Shanghai showed greater susceptibility to extremely cold days. PMID:26703637

Effects of Extreme Temperatures on Cause-Specific Cardiovascular Mortality in China.

PubMed

Wang, Xuying; Li, Guoxing; Liu, Liqun; Westerdahl, Dane; Jin, Xiaobin; Pan, Xiaochuan

2015-12-21

Limited evidence is available for the effects of extreme temperatures on cause-specific cardiovascular mortality in China. We collected data from Beijing and Shanghai, China, during 2007-2009, including the daily mortality of cardiovascular disease, cerebrovascular disease, ischemic heart disease and hypertensive disease, as well as air pollution concentrations and weather conditions. We used Poisson regression with a distributed lag non-linear model to examine the effects of extremely high and low ambient temperatures on cause-specific cardiovascular mortality. For all cause-specific cardiovascular mortality, Beijing had stronger cold and hot effects than those in Shanghai. The cold effects on cause-specific cardiovascular mortality reached the strongest at lag 0-27, while the hot effects reached the strongest at lag 0-14. The effects of extremely low and high temperatures differed by mortality types in the two cities. Hypertensive disease in Beijing was particularly susceptible to both extremely high and low temperatures; while for Shanghai, people with ischemic heart disease showed the greatest relative risk (RRs = 1.16, 95% CI: 1.03, 1.34) to extremely low temperature. People with hypertensive disease were particularly susceptible to extremely low and high temperatures in Beijing. People with ischemic heart disease in Shanghai showed greater susceptibility to extremely cold days.

A web-based study of bipolarity and impulsivity in athletes engaging in extreme and high-risk sports.

PubMed

Dudek, Dominika; Siwek, Marcin; Jaeschke, Rafał; Drozdowicz, Katarzyna; Styczeń, Krzysztof; Arciszewska, Aleksandra; Chrobak, Adrian A; Rybakowski, Janusz K

2016-06-01

We hypothesised that men and women who engage in extreme or high-risk sports would score higher on standardised measures of bipolarity and impulsivity compared to age and gender matched controls. Four-hundred and eighty extreme or high-risk athletes (255 males and 225 females) and 235 age-matched control persons (107 males and 128 females) were enrolled into the web-based case-control study. The Mood Disorder Questionnaire (MDQ) and Barratt Impulsiveness Scale (BIS-11) were administered to screen for bipolarity and impulsive behaviours, respectively. Results indicated that extreme or high-risk athletes had significantly higher scores of bipolarity and impulsivity, and lower scores on cognitive complexity of the BIS-11, compared to controls. Further, there were positive correlations between the MDQ and BIS-11 scores. These results showed greater rates of bipolarity and impulsivity, in the extreme or high-risk athletes, suggesting these measures are sensitive to high-risk behaviours.

OSBPL10, a novel candidate gene for high triglyceride trait in dyslipidemic Finnish subjects, regulates cellular lipid metabolism.

PubMed

Perttilä, Julia; Merikanto, Krista; Naukkarinen, Jussi; Surakka, Ida; Martin, Nicolas W; Tanhuanpää, Kimmo; Grimard, Vinciane; Taskinen, Marja-Riitta; Thiele, Christoph; Salomaa, Veikko; Jula, Antti; Perola, Markus; Virtanen, Ismo; Peltonen, Leena; Olkkonen, Vesa M

2009-08-01

Analysis of variants in three genes encoding oxysterol-binding protein (OSBP) homologues (OSBPL2, OSBPL9, OSBPL10) in Finnish families with familial low high-density lipoprotein (HDL) levels (N = 426) or familial combined hyperlipidemia (N = 684) revealed suggestive linkage of OSBPL10 single-nucleotide polymorphisms (SNPs) with extreme end high triglyceride (TG; >90th percentile) trait. Prompted by this initial finding, we carried out association analysis in a metabolic syndrome subcohort (Genmets) of Health2000 examination survey (N = 2,138), revealing association of multiple OSBPL10 SNPs with high serum TG levels (>95th percentile). To investigate whether OSBPL10 could be the gene underlying the observed linkage and association, we carried out functional experiments in the human hepatoma cell line Huh7. Silencing of OSBPL10 increased the incorporation of [(3)H]acetate into cholesterol and both [(3)H]acetate and [(3)H]oleate into triglycerides and enhanced the accumulation of secreted apolipoprotein B100 in growth medium, suggesting that the encoded protein ORP10 suppresses hepatic lipogenesis and very-low-density lipoprotein production. ORP10 was shown to associate dynamically with microtubules, consistent with its involvement in intracellular transport or organelle positioning. The data introduces OSBPL10 as a gene whose variation may contribute to high triglyceride levels in dyslipidemic Finnish subjects and provides evidence for ORP10 as a regulator of cellular lipid metabolism.

A Missile-Borne Angular Velocity Sensor Based on Triaxial Electromagnetic Induction Coils

PubMed Central

Li, Jian; Wu, Dan; Han, Yan

2016-01-01

Aiming to solve the problem of the limited measuring range for angular motion parameters of high-speed rotating projectiles in the field of guidance and control, a self-adaptive measurement method for angular motion parameters based on the electromagnetic induction principle is proposed. First, a framework with type bent “I-shape” is used to design triaxial coils in a mutually orthogonal way. Under the condition of high rotational speed of a projectile, the induction signal of the projectile moving across a geomagnetic field is acquired by using coils. Second, the frequency of the pulse signal is adjusted self-adaptively. Angular velocity and angular displacement are calculated in the form of periodic pulse counting and pulse accumulation, respectively. Finally, on the basis of that principle prototype of the sensor is researched and developed, performance of measuring angular motion parameters are tested on the sensor by semi-physical and physical simulation experiments, respectively. Experimental results demonstrate that the sensor has a wide measuring range of angular velocity from 1 rps to 100 rps with a measurement error of less than 0.3%, and the angular displacement measurement error is lower than 0.2°. The proposed method satisfies measurement requirements for high-speed rotating projectiles with an extremely high dynamic range of rotational speed and high precision, and has definite value to engineering applications in the fields of attitude determination and geomagnetic navigation. PMID:27706039

A Missile-Borne Angular Velocity Sensor Based on Triaxial Electromagnetic Induction Coils.

PubMed

Li, Jian; Wu, Dan; Han, Yan

2016-09-30

Aiming to solve the problem of the limited measuring range for angular motion parameters of high-speed rotating projectiles in the field of guidance and control, a self-adaptive measurement method for angular motion parameters based on the electromagnetic induction principle is proposed. First, a framework with type bent "I-shape" is used to design triaxial coils in a mutually orthogonal way. Under the condition of high rotational speed of a projectile, the induction signal of the projectile moving across a geomagnetic field is acquired by using coils. Second, the frequency of the pulse signal is adjusted self-adaptively. Angular velocity and angular displacement are calculated in the form of periodic pulse counting and pulse accumulation, respectively. Finally, on the basis of that principle prototype of the sensor is researched and developed, performance of measuring angular motion parameters are tested on the sensor by semi-physical and physical simulation experiments, respectively. Experimental results demonstrate that the sensor has a wide measuring range of angular velocity from 1 rps to 100 rps with a measurement error of less than 0.3%, and the angular displacement measurement error is lower than 0.2°. The proposed method satisfies measurement requirements for high-speed rotating projectiles with an extremely high dynamic range of rotational speed and high precision, and has definite value to engineering applications in the fields of attitude determination and geomagnetic navigation.

The impact of environmental stress on male reproductive development in plants: biological processes and molecular mechanisms

PubMed Central

de Storme, Nico; Geelen, Danny

2014-01-01

In plants, male reproductive development is extremely sensitive to adverse climatic environments and (a)biotic stress. Upon exposure to stress, male gametophytic organs often show morphological, structural and metabolic alterations that typically lead to meiotic defects or premature spore abortion and male reproductive sterility. Depending on the type of stress involved (e.g. heat, cold, drought) and the duration of stress exposure, the underlying cellular defect is highly variable and either involves cytoskeletal alterations, tapetal irregularities, altered sugar utilization, aberrations in auxin metabolism, accumulation of reactive oxygen species (ROS; oxidative stress) or the ectopic induction of programmed cell death (PCD). In this review, we present the critically stress-sensitive stages of male sporogenesis (meiosis) and male gametogenesis (microspore development), and discuss the corresponding biological processes involved and the resulting alterations in male reproduction. In addition, this review also provides insights into the molecular and/or hormonal regulation of the environmental stress sensitivity of male reproduction and outlines putative interaction(s) between the different processes involved. PMID:23731015

The Ascorbate-glutathione-α-tocopherol Triad in Abiotic Stress Response

PubMed Central

Szarka, András; Tomasskovics, Bálint; Bánhegyi, Gábor

2012-01-01

The life of any living organism can be defined as a hurdle due to different kind of stresses. As with all living organisms, plants are exposed to various abiotic stresses, such as drought, salinity, extreme temperatures and chemical toxicity. These primary stresses are often interconnected, and lead to the overproduction of reactive oxygen species (ROS) in plants, which are highly reactive and toxic and cause damage to proteins, lipids, carbohydrates and DNA, which ultimately results in oxidative stress. Stress-induced ROS accumulation is counteracted by enzymatic antioxidant systems and non-enzymatic low molecular weight metabolites, such as ascorbate, glutathione and α-tocopherol. The above mentioned low molecular weight antioxidants are also capable of chelating metal ions, reducing thus their catalytic activity to form ROS and also scavenge them. Hence, in plant cells, this triad of low molecular weight antioxidants (ascorbate, glutathione and α-tocopherol) form an important part of abiotic stress response. In this work we are presenting a review of abiotic stress responses connected to these antioxidants. PMID:22605990

How cracks are hot and cool: a burning issue for paper.

PubMed

Toussaint, Renaud; Lengliné, Olivier; Santucci, Stéphane; Vincent-Dospital, Tom; Naert-Guillot, Muriel; Måløy, Knut Jørgen

2016-07-07

Material failure is accompanied by important heat exchange, with extremely high temperature - thousands of degrees - reached at crack tips. Such a temperature may subsequently alter the mechanical properties of stressed solids, and finally facilitate their rupture. Thermal runaway weakening processes could indeed explain stick-slip motions and even be responsible for deep earthquakes. Therefore, to better understand catastrophic rupture events, it appears crucial to establish an accurate energy budget of fracture propagation from a clear measure of various energy dissipation sources. In this work, combining analytical calculations and numerical simulations, we directly relate the temperature field around a moving crack tip to the part α of mechanical energy converted into heat. By monitoring the slow crack growth in paper sheets using an infrared camera, we measure a significant fraction α = 12% ± 4%. Besides, we show that (self-generated) heat accumulation could weaken our samples by microfiber combustion, and lead to a fast crack/dynamic failure/regime.

Bioaccessibility of barium from barite contaminated soils based on gastric phase in vitro data and plant uptake.

PubMed

Abbasi, Sedigheh; Lamb, Dane T; Palanisami, Thavamani; Kader, Mohammed; Matanitobua, Vitukawalu; Megharaj, Mallavarapu; Naidu, Ravi

2016-02-01

Barite contamination of soil commonly occurs from either barite mining or explorative drilling operations. This work reported in vitro data for barite contaminated soils using the physiologically based extraction test (PBET) methodology. The existence of barite in plant tissue and the possibility of 'biomineralised' zones was also investigated using Scanning Electron Microscopy. Soils with low barium (Ba) concentrations showed a higher proportion of Ba extractability than barite rich samples. Barium uptake to spinach from soil was different between short term spiking studies and field weathered soils. Furthermore, Ba crystals were not evident in spinach tissue or acid digest solutions grown in barium nitrate spiked soils despite high accumulation. Barite was found in the plant digest solutions from barite contaminated soils only. Results indicate that under the conservative assumptions made, a child would need to consume extreme quantities of soil over an extended period to cause chronic health problems. Copyright © 2015 Elsevier Ltd. All rights reserved.

Learning from Accident and Error: Avoiding the Hazards of Workload, Stress, and Routine Interruptions in the Emergency Department

PubMed Central

Morrison, J. Bradley; Rudolph, Jenny W.

2012-01-01

This article presents a model of how a build-up of interruptions can shift the dynamics of the emergency department (ED) from an adaptive, self-regulating system into a fragile, crisis-prone one. Drawing on case studies of organizational disasters and insights from the theory of high-reliability organizations, the authors use computer simulations to show how the accumulation of small interruptions could have disproportionately large effects in the ED. In the face of a mounting workload created by interruptions, EDs, like other organizational systems, have tipping points, thresholds beyond which a vicious cycle can lead rather quickly to the collapse of normal operating routines and in the extreme to a crisis of organizational paralysis. The authors discuss some possible implications for emergency medicine, emphasizing the potential threat from routine, non-novel demands on EDs and raising the concern that EDs are operating closer to the precipitous edge of crisis as ED crowding exacerbates the problem. PMID:22168187

Single Echo MRI

PubMed Central

Galiana, Gigi; Constable, R. Todd

2014-01-01

Purpose Previous nonlinear gradient research has focused on trajectories that reconstruct images with a minimum number of echoes. Here we describe sequences where the nonlinear gradients vary in time to acquire the image in a single readout. The readout is designed to be very smooth so that it can be compressed to minimal time without violating peripheral nerve stimulation limits, yielding an image from a single 4 ms echo. Theory and Methods This sequence was inspired by considering the code of each voxel, i.e. the phase accumulation that a voxel follows through the readout, an approach connected to traditional encoding theory. We present simulations for the initial sequence, a low slew rate analog, and higher resolution reconstructions. Results Extremely fast acquisitions are achievable, though as one would expect, SNR is reduced relative to the slower Cartesian sampling schemes because of the high gradient strengths. Conclusions The prospect that nonlinear gradients can acquire images in a single <10 ms echo makes this a novel and interesting approach to image encoding. PMID:24465837

Habitable evaporated cores: transforming mini-Neptunes into super-Earths in the habitable zones of M dwarfs.

PubMed

Luger, R; Barnes, R; Lopez, E; Fortney, J; Jackson, B; Meadows, V

2015-01-01

We show that photoevaporation of small gaseous exoplanets ("mini-Neptunes") in the habitable zones of M dwarfs can remove several Earth masses of hydrogen and helium from these planets and transform them into potentially habitable worlds. We couple X-ray/extreme ultraviolet (XUV)-driven escape, thermal evolution, tidal evolution, and orbital migration to explore the types of systems that may harbor such "habitable evaporated cores" (HECs). We find that HECs are most likely to form from planets with ∼1 M⊕ solid cores with up to about 50% H/He by mass, though whether or not a given mini-Neptune forms a HEC is highly dependent on the early XUV evolution of the host star. As terrestrial planet formation around M dwarfs by accumulation of local material is likely to form planets that are small and dry, evaporation of small migrating mini-Neptunes could be one of the dominant formation mechanisms for volatile-rich Earths around these stars.

Polymer-coated FBG sensor for simultaneous temperature and strain monitoring in composite materials under cryogenic conditions.

PubMed

Sampath, Umesh; Kim, Daegil; Kim, Hyunjin; Song, Minho

2018-01-20

A polymer-coated fiber Bragg grating (PCFBG) is examined for real-time temperature and strain monitoring in composite materials at cryogenic temperatures. The proposed sensor enables the simultaneous measurement of temperature and strain at extremely low temperatures by tracking the changes in the reflected center wavelengths from a pair of PCFBGs embedded in a composite material. The cryogenic temperature sensing was realized by introducing polymer coatings onto bare FBGs, which resulted in high temperature sensitivity under cryogenic conditions. A comparison of wavelength responses of the Bragg grating with and without a polymer coating toward temperatures ranging from 25°C to -180°C was performed. The polymer-coated FBG exhibited a sensitivity of 48 pm/°C, which is 10 times greater than that of the bare FBGs. In addition, the encapsulation of the FBG in a capillary tube made it possible to evaluate the strain accumulated within the composite during operation under cryogenic conditions.

Continuous-flow technology—a tool for the safe manufacturing of active pharmaceutical ingredients.

PubMed

Gutmann, Bernhard; Cantillo, David; Kappe, C Oliver

2015-06-01

In the past few years, continuous-flow reactors with channel dimensions in the micro- or millimeter region have found widespread application in organic synthesis. The characteristic properties of these reactors are their exceptionally fast heat and mass transfer. In microstructured devices of this type, virtually instantaneous mixing can be achieved for all but the fastest reactions. Similarly, the accumulation of heat, formation of hot spots, and dangers of thermal runaways can be prevented. As a result of the small reactor volumes, the overall safety of the process is significantly improved, even when harsh reaction conditions are used. Thus, microreactor technology offers a unique way to perform ultrafast, exothermic reactions, and allows the execution of reactions which proceed via highly unstable or even explosive intermediates. This Review discusses recent literature examples of continuous-flow organic synthesis where hazardous reactions or extreme process windows have been employed, with a focus on applications of relevance to the preparation of pharmaceuticals. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Direct Evidence for Solid-like Hydrogen in a Nanoporous Carbon Hydrogen Storage Material at Supercritical Temperatures

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ting, Valeska P.; Ramirez-Cuesta, Anibal J.; Bimbo, Nuno

Here in this paper we report direct physical evidence that confinement of molecular hydrogen (H 2) in an optimized nanoporous carbon results in accumulation of hydrogen with characteristics commensurate with solid H 2 at temperatures up to 67 K above the liquid vapor critical temperature of bulk H 2. This extreme densification is attributed to confinement of 112 molecules in the optimally sized micropores, and occurs at pressures as low as 0.02 MPa. The quantities of contained, solid-like H 2 increased with pressure and were directly evaluated using in situ inelastic neutron scattering and confirmed by analysis of gas sorptionmore » isotherms. The demonstration of the existence of solid-like H 2 challenges the existing assumption that supercritical hydrogen confined in nanopores has an upper limit of liquid H 2 density. Thus, this insight offers opportunities for the development of more accurate models for the evaluation and design of nanoporous materials for high capacity adsorptive hydrogen storage.« less

Elevated stearoyl-CoA desaturase-1 expression in skeletal muscle contributes to abnormal fatty acid partitioning in obese humans

PubMed Central

Hulver, Matthew W.; Berggren, Jason R.; Carper, Michael J.; Miyazaki, Makoto; Ntambi, James M.; Hoffman, Eric P.; Thyfault, John P.; Stevens, Robert; Dohm, G. Lynis; Houmard, Joseph A.; Muoio, Deborah M.

2014-01-01

Summary Obesity and type 2 diabetes are strongly associated with abnormal lipid metabolism and accumulation of intramyocellular triacylglycerol, but the underlying cause of these perturbations are yet unknown. Herein, we show that the lipogenic gene, stearoyl-CoA desaturase 1 (SCD1), is robustly up-regulated in skeletal muscle from extremely obese humans. High expression and activity of SCD1, an enzyme that catalyzes the synthesis of monounsaturated fatty acids, corresponded with low rates of fatty acid oxidation, increased triacylglycerol synthesis and increased monounsaturation of muscle lipids. Elevated SCD1 expression and abnormal lipid partitioning were retained in primary skeletal myocytes derived from obese compared to lean donors, implying that these traits might be driven by epigenetic and/or heritable mechanisms. Overexpression of human SCD1 in myotubes from lean subjects was sufficient to mimic the obese phenotype. These results suggest that elevated expression of SCD1 in skeletal muscle contributes to abnormal lipid metabolism and progression of obesity. PMID:16213227

Elevated stearoyl-CoA desaturase-1 expression in skeletal muscle contributes to abnormal fatty acid partitioning in obese humans.

PubMed

Hulver, Matthew W; Berggren, Jason R; Carper, Michael J; Miyazaki, Makoto; Ntambi, James M; Hoffman, Eric P; Thyfault, John P; Stevens, Robert; Dohm, G Lynis; Houmard, Joseph A; Muoio, Deborah M

2005-10-01

Obesity and type 2 diabetes are strongly associated with abnormal lipid metabolism and accumulation of intramyocellular triacylglycerol, but the underlying cause of these perturbations are yet unknown. Herein, we show that the lipogenic gene, stearoyl-CoA desaturase 1 (SCD1), is robustly up-regulated in skeletal muscle from extremely obese humans. High expression and activity of SCD1, an enzyme that catalyzes the synthesis of monounsaturated fatty acids, corresponded with low rates of fatty acid oxidation, increased triacylglycerol synthesis and increased monounsaturation of muscle lipids. Elevated SCD1 expression and abnormal lipid partitioning were retained in primary skeletal myocytes derived from obese compared to lean donors, implying that these traits might be driven by epigenetic and/or heritable mechanisms. Overexpression of human SCD1 in myotubes from lean subjects was sufficient to mimic the obese phenotype. These results suggest that elevated expression of SCD1 in skeletal muscle contributes to abnormal lipid metabolism and progression of obesity.

Do positive interactions increase with abiotic stress? A test from a semi-arid steppe.

PubMed Central

Maestre, Fernando T; Cortina, Jordi

2004-01-01

Theoretical models predict that the relative importance of facilitation and competition may vary inversely across gradients of abiotic stress. However, these predictions have not been thoroughly tested in the field, especially in semi-arid environments. In this study, we evaluated how the net effect of the tussock grass Stipa tenacissima on the shrub Pistacia lentiscus varied across a gradient of abiotic stress in semi-arid Mediterranean steppes. We fitted the relationship between accumulated rainfall and the relative neighbour index (our measures of abiotic stress and of the net effect of S. tenacissima on P. lentiscus, respectively), which varied across this gradient, to a quadratic model. Competitive interactions dominated at both extremes of the gradient. Our results do not support established theory. Instead, they suggest that a shift from facilitation to competition under high abiotic stress conditions is likely to occur when the levels of the most limiting resource are so low that the benefits provided by the facilitator cannot overcome its own resource uptake. PMID:15504009

Direct Evidence for Solid-like Hydrogen in a Nanoporous Carbon Hydrogen Storage Material at Supercritical Temperatures

DOE PAGES

Ting, Valeska P.; Ramirez-Cuesta, Anibal J.; Bimbo, Nuno; ...

2015-07-14

Here in this paper we report direct physical evidence that confinement of molecular hydrogen (H 2) in an optimized nanoporous carbon results in accumulation of hydrogen with characteristics commensurate with solid H 2 at temperatures up to 67 K above the liquid vapor critical temperature of bulk H 2. This extreme densification is attributed to confinement of 112 molecules in the optimally sized micropores, and occurs at pressures as low as 0.02 MPa. The quantities of contained, solid-like H 2 increased with pressure and were directly evaluated using in situ inelastic neutron scattering and confirmed by analysis of gas sorptionmore » isotherms. The demonstration of the existence of solid-like H 2 challenges the existing assumption that supercritical hydrogen confined in nanopores has an upper limit of liquid H 2 density. Thus, this insight offers opportunities for the development of more accurate models for the evaluation and design of nanoporous materials for high capacity adsorptive hydrogen storage.« less

Geochemistry and genesis of the angrites

NASA Technical Reports Server (NTRS)

Mittlefehldt, David W.; Lindstrom, Marilyn M.

1990-01-01

The major and trace elements were analyzed in samples of LEW86010, LEW87051, and Angra dos Reis angrites were analyzed using INAA and fused-bead EMP techniques. Results suggest that all three angrites originated on a volatile-depleted (Na-poor) but oxidized parent body or on several bodies. The combination of low Na and high FeO/MnO found in these samples suggests that the extreme Na depletion was caused by parent-body outgassing during differentiation, rather than by nebular processes. It was also found that the refractory-element abundances observed in LEW86010 and LEW87051 are related via olivine control; it is suggested that LEW86010 may be a residual melt from a LEW87051-like precursor or that LEW87051 formed from a LEW86010-like precursor via olivine accumulation. On the other hand, the Angra dos Reis displayed an unusual refractory element pattern suggesting that either the angrite parent body was heterogeneous or that Angra dos Reis was formed on a parent body different from that of the other two angrites.

Short-Term Retrospective Land Data Assimilation Schemes

NASA Technical Reports Server (NTRS)

Houser, P. R.; Cosgrove, B. A.; Entin, J. K.; Lettenmaier, D.; ODonnell, G.; Mitchell, K.; Marshall, C.; Lohmann, D.; Schaake, J. C.; Duan, Q.;

Modeling the Spatial and Temporal Variation of Monthly and Seasonal Precipitation on the Nevada Test Site and Vicinity, 1960-2006

USGS Publications Warehouse

Blainey, Joan B.; Webb, Robert H.; Magirl, Christopher S.

2007-01-01

The Nevada Test Site (NTS), located in the climatic transition zone between the Mojave and Great Basin Deserts, has a network of precipitation gages that is unusually dense for this region. This network measures monthly and seasonal variation in a landscape with diverse topography. Precipitation data from 125 climate stations on or near the NTS were used to spatially interpolate precipitation for each month during the period of 1960 through 2006 at high spatial resolution (30 m). The data were collected at climate stations using manual and/or automated techniques. The spatial interpolation method, applied to monthly accumulations of precipitation, is based on a distance-weighted multivariate regression between the amount of precipitation and the station location and elevation. This report summarizes the temporal and spatial characteristics of the available precipitation records for the period 1960 to 2006, examines the temporal and spatial variability of precipitation during the period of record, and discusses some extremes in seasonal precipitation on the NTS.

Glyphosate degradation in glyphosate-resistant and -susceptible crops and weeds.

PubMed

Duke, Stephen O

2011-06-08

High levels of aminomethylphosphonic acid (AMPA), the main glyphosate metabolite, have been found in glyphosate-treated, glyphosate-resistant (GR) soybean, apparently due to plant glyphosate oxidoreductase (GOX)-like activity. AMPA is mildly phytotoxic, and under some conditions the AMPA accumulating in GR soybean correlates with glyphosate-caused phytotoxicity. A bacterial GOX is used in GR canola, and an altered bacterial glyphosate N-acetyltransferase is planned for a new generation of GR crops. In some weed species, glyphosate degradation could contribute to natural resistance. Neither an isolated plant GOX enzyme nor a gene for it has yet been reported in plants. Gene mutation or amplification of plant genes for GOX-like enzyme activity or horizontal transfer of microbial genes from glyphosate-degrading enzymes could produce GR weeds. Yet, there is no evidence that metabolic degradation plays a significant role in evolved resistance to glyphosate. This is unexpected, considering the extreme selection pressure for evolution of glyphosate resistance in weeds and the difficulty in plants of evolving glyphosate resistance via other mechanisms.

Adaptation potential of naturally ventilated barns to high temperature extremes: The OptiBarn project

NASA Astrophysics Data System (ADS)

Menz, Christoph

2016-04-01

Climate change interferes with various aspects of the socio-economic system. One important aspect is its influence on animal husbandry, especially dairy faming. Dairy cows are usually kept in naturally ventilated barns (NVBs) which are particular vulnerable to extreme events due to their low adaptation capabilities. An effective adaptation to high outdoor temperatures for example, is only possible under certain wind and humidity conditions. High temperature extremes are expected to increase in number and strength under climate change. To assess the impact of this change on NVBs and dairy cows also the changes in wind and humidity needs to be considered. Hence we need to consider the multivariate structure of future temperature extremes. The OptiBarn project aims to develop sustainable adaptation strategies for dairy housings under climate change for Europe, by considering the multivariate structure of high temperature extremes. In a first step we identify various multivariate high temperature extremes for three core regions in Europe. With respect to dairy cows in NVBs we will focus on the wind and humidity field during high temperature events. In a second step we will use the CORDEX-EUR-11 ensemble to evaluate the capability of the RCMs to model such events and assess their future change potential. By transferring the outdoor conditions to indoor climate and animal wellbeing the results of this assessment can be used to develop technical, architectural and animal specific adaptation strategies for high temperature extremes.

Transformation of Solanum tuberosum plastids allows high expression levels of β-glucuronidase both in leaves and microtubers developed in vitro.

PubMed

Segretin, María Eugenia; Lentz, Ezequiel Matías; Wirth, Sonia Alejandra; Morgenfeld, Mauro Miguel; Bravo-Almonacid, Fernando Félix

2012-04-01

Plastid genome transformation offers an attractive methodology for transgene expression in plants, but for potato, only expression of gfp transgene (besides the selective gene aadA) has been published. We report here successful expression of β-glucuronidase in transplastomic Solanum tuberosum (var. Desiree) plants, with accumulation levels for the recombinant protein of up to 41% of total soluble protein in mature leaves. To our knowledge, this is the highest expression level reported for a heterologous protein in S. tuberosum. Accumulation of the recombinant protein in soil-grown minitubers was very low, as described in previous reports. Interestingly, microtubers developed in vitro showed higher accumulation of β-glucuronidase. As light exposure during their development could be the trigger for this high accumulation, we analyzed the effect of light on β-glucuronidase accumulation in transplastomic tubers. Exposure to light for 8 days increased β-glucuronidase accumulation in soil-grown tubers, acting as a light-inducible expression system for recombinant protein accumulation in tuber plastids. In this paper we show that plastid transformation in potato allows the highest recombinant protein accumulation in foliar tissue described so far for this food crop. We also demonstrate that in tubers high accumulation is possible and depends on light exposure. Because tubers have many advantages as protein storage organs, these results could lead to new recombinant protein production schemes based on potato.

The HSP terminator of Arabidopsis thaliana induces a high level of miraculin accumulation in transgenic tomatoes.

PubMed

Hirai, Tadayoshi; Kurokawa, Natsuko; Duhita, Narendra; Hiwasa-Tanase, Kyoko; Kato, Kazuhisa; Kato, Ko; Ezura, Hiroshi

2011-09-28

High-level accumulation of the target recombinant protein is a significant issue in heterologous protein expression using transgenic plants. Miraculin, a taste-modifying protein, was accumulated in transgenic tomatoes using an expression cassette in which the miraculin gene was expressed by the cauliflower mosaic virus (CaMV) 35S promoter and the heat shock protein (HSP) terminator (MIR-HSP). The HSP terminator was derived from heat shock protein 18.2 in Arabidopsis thaliana . Using this HSP-containing cassette, the miraculin concentration in T0 transgenic tomato lines was 1.4-13.9% of the total soluble protein (TSP), and that in the T1 transgenic tomato line homozygous for the miraculin gene reached 17.1% of the TSP. The accumulation level of the target protein was comparable to levels observed with chloroplast transformation. The high-level accumulation of miraculin in T0 transgenic tomato lines achieved by the HSP terminator was maintained in the successive T1 generation, demonstrating the genetic stability of this accumulation system.

The nonstationary impact of local temperature changes and ENSO on extreme precipitation at the global scale

NASA Astrophysics Data System (ADS)

Sun, Qiaohong; Miao, Chiyuan; Qiao, Yuanyuan; Duan, Qingyun

2017-12-01

The El Niño-Southern Oscillation (ENSO) and local temperature are important drivers of extreme precipitation. Understanding the impact of ENSO and temperature on the risk of extreme precipitation over global land will provide a foundation for risk assessment and climate-adaptive design of infrastructure in a changing climate. In this study, nonstationary generalized extreme value distributions were used to model extreme precipitation over global land for the period 1979-2015, with ENSO indicator and temperature as covariates. Risk factors were estimated to quantify the contrast between the influence of different ENSO phases and temperature. The results show that extreme precipitation is dominated by ENSO over 22% of global land and by temperature over 26% of global land. With a warming climate, the risk of high-intensity daily extreme precipitation increases at high latitudes but decreases in tropical regions. For ENSO, large parts of North America, southern South America, and southeastern and northeastern China are shown to suffer greater risk in El Niño years, with more than double the chance of intense extreme precipitation in El Niño years compared with La Niña years. Moreover, regions with more intense precipitation are more sensitive to ENSO. Global climate models were used to investigate the changing relationship between extreme precipitation and the covariates. The risk of extreme, high-intensity precipitation increases across high latitudes of the Northern Hemisphere but decreases in middle and lower latitudes under a warming climate scenario, and will likely trigger increases in severe flooding and droughts across the globe. However, there is some uncertainties associated with the influence of ENSO on predictions of future extreme precipitation, with the spatial extent and risk varying among the different models.

ALS3 encodes a phloem-localized ABC transporter-like protein that is required for aluminum tolerance in Arabidopsis.

PubMed

Larsen, Paul B; Geisler, Matt J B; Jones, Carol A; Williams, Kelly M; Cancel, Jesse D

2005-02-01

Aluminum (Al) toxicity in acid soils is a worldwide agricultural problem that severely limits crop productivity through inhibition of root growth. Previously, Arabidopsis mutants with increased Al sensitivity were isolated in order to identify genes important for Al tolerance in plants. One mutant, als3, exhibited extreme root growth inhibition in the presence of Al, suggesting that this mutation negatively impacts a gene required for Al tolerance. Map-based cloning of the als3-1 mutation resulted in the isolation of a novel gene that encodes a previously undescribed ABC transporter-like protein, which is highly homologous to a putative bacterial metal resistance protein, ybbM. Northern analysis for ALS3 expression revealed that it is found in all organs examined, which is consistent with the global nature of Al sensitivity displayed by als3, and that expression increases in roots following Al treatment. Based on GUS fusion and in situ hybridization analyses, ALS3 is primarily expressed in leaf hydathodes and the phloem throughout the plant, along with the root cortex following Al treatment. Immunolocalization indicates that ALS3 predominantly accumulates in the plasma membrane of cells that express ALS3. From our results, it appears that ALS3 encodes an ABC transporter-like protein that is required for Al resistance/tolerance and may function to redistribute accumulated Al away from sensitive tissues in order to protect the growing root from the toxic effects of Al.

Hepatitis B Virus Blood Screening: Need for Reappraisal of Blood Safety Measures?

PubMed Central

Candotti, Daniel; Laperche, Syria

2018-01-01

Over the past decades, the risk of HBV transfusion–transmission has been steadily reduced through the recruitment of volunteer donors, the selection of donors based on risk-behavior evaluation, the development of increasingly more sensitive hepatitis B antigen (HBsAg) assays, the use of hepatitis B core antibody (anti-HBc) screening in some low-endemic countries, and the recent implementation of HBV nucleic acid testing (NAT). Despite this accumulation of blood safety measures, the desirable zero risk goal has yet to be achieved. The residual risk of HBV transfusion–transmission appears associated with the preseroconversion window period and occult HBV infection characterized by the absence of detectable HBsAg and extremely low levels of HBV DNA. Infected donations tested false-negative with serology and/or NAT still persist and derived blood components were shown to transmit the virus, although rarely. Questions regarding the apparent redundancy of some safety measures prompted debates on how to reduce the cost of HBV blood screening. In particular, accumulating data strongly suggests that HBsAg testing may add little, if any HBV risk reduction value when HBV NAT and anti-HBc screening also apply. Absence or minimal acceptable infectious risk needs to be assessed before considering discontinuing HBsAg. Nevertheless, HBsAg remains essential in high-endemic settings where anti-HBc testing cannot be implemented without compromising blood availability. HBV screening strategy should be decided according to local epidemiology, estimate of the infectious risk, and resources. PMID:29515997

Nitrate reductase-mediated early nitric oxide burst alleviates oxidative damage induced by aluminum through enhancement of antioxidant defenses in roots of wheat (Triticum aestivum).

PubMed

Sun, Chengliang; Lu, Lingli; Liu, Lijuan; Liu, Wenjing; Yu, Yan; Liu, Xiaoxia; Hu, Yan; Jin, Chongwei; Lin, Xianyong

2014-03-01

• Nitric oxide (NO) is an important signaling molecule involved in the physiological processes of plants. The role of NO release in the tolerance strategies of roots of wheat (Triticum aestivum) under aluminum (Al) stress was investigated using two genotypes with different Al resistances. • An early NO burst at 3 h was observed in the root tips of the Al-tolerant genotype Jian-864, whereas the Al-sensitive genotype Yang-5 showed no NO accumulation at 3 h but an extremely high NO concentration after 12 h. Stimulating NO production at 3 h in the root tips of Yang-5 with the NO donor relieved Al-induced root inhibition and callose production, as well as oxidative damage and ROS accumulation, while elimination of the early NO burst by NO scavenger aggravated root inhibition in Jian-864. • Synthesis of early NO in roots of Jian-864 was mediated through nitrate reductase (NR) but not through NO synthase. Elevated antioxidant enzyme activities were induced by Al stress in both wheat genotypes and significantly enhanced by NO donor, but suppressed by NO scavenger or NR inhibitor. • These results suggest that an NR-mediated early NO burst plays an important role in Al resistance of wheat through modulating enhanced antioxidant defense to adapt to Al stress. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

Organotins in North Sea brown shrimp (Crangon crangon L.) after implementation of the TBT ban.

PubMed

Verhaegen, Y; Monteyne, E; Neudecker, T; Tulp, I; Smagghe, G; Cooreman, K; Roose, P; Parmentier, K

2012-03-01

The organotin (OT) compounds tributyltin (TBT) and triphenyltin (TPhT) are potent biocides that have been used ubiquitously in antifouling paints and pesticides since the mid-1970s. These biocides are extremely toxic to marine life, particularly marine gastropod populations. The European Union therefore took measures to reduce the use of TBT-based antifouling paints on ships and ultimately banned these paints in 2003. Despite sufficient data on OT concentrations in marine gastropods, data are scarce for other species such as the North Sea brown shrimp (Crangon crangon), a dominant crustacean species in North Sea inshore benthic communities. The present study provides the first spatial overview of OT concentrations in North Sea brown shrimp. We have compared these data with historical concentrations in shrimp as well as with sediment concentrations. We have also addressed the effect on the shrimp stock and any human health risks associated with the OT concentrations found. TBT and TPhT in shrimp tail muscle ranged from 4 to 124 and from 1 to 24 μg kg(-1) DW, respectively. High levels are accumulated in estuarine areas and are clearly related with sediment concentrations (biota-sediment accumulation factor ~10). Levels have decreased approximately 10-fold since the ban took effect, coinciding with a recovery of the shrimp stock after 30 years of gradual regression. Furthermore, the OT levels found in brown shrimp no longer present a human health risk. Copyright © 2011 Elsevier Ltd. All rights reserved.

Mechanisms of desiccation tolerance in the bromeliad Pitcairnia burchellii Mez: biochemical adjustments and structural changes.

PubMed

Vieira, Evandro Alves; Silva, Kleber Resende; Oriani, Aline; Moro, Camila Fernandes; Braga, Marcia Regina

2017-12-01

Rocky outcrops represent the diversity center of vascular desiccation tolerant (DT) plants. Vegetation in this environment is exposed to an extended dry season and extreme conditions due to rocky soils and high sun exposure. In this study, we demonstrated that Pitcairnia burchellii, a bromeliad from rocky outcrops, tolerates intense desiccation for about 90 days due to strategies as accumulation of compatible osmolytes and antioxidant substances together with leaf morphological changes. In dehydrated plants, an increase in antioxidant activity was observed and the vacuolization of parenchyma cells was accompanied by proline accumulation in leaves and rhizomes. Precursors related to phenylpropanoid pathway increased significantly during plant dehydration. Accordingly, increases in anthocyanin and phenolic contents as well as lignin deposition were observed in leaves of dehydrated plants. Cell divisions and a decrease in stored starch were observed in the rhizomes indicating starch mobilization. Anatomical analyses revealed the presence of a more developed water-storage tissue in dehydrated leaves. During desiccation, leaves curl upwards and the adaxial V deep water-storage tissue is supported by two larger lateral vascular bundles. Cell wall folding and an increased proportion of arabinose-containing polymers was observed in leaves under dehydration, suggesting increasing of cell wall flexibility during desiccation. Such biochemical and morphological changes are consistent with the ability of P. burchellii to tolerate intense desiccation and behave as a resurrection species. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

Effect of Hydraulic Accumulator on Pressure Surge of a Hydrostatic Transmission System

NASA Astrophysics Data System (ADS)

Kumar, Ajit; Das, Jayanta; Dasgupta, Kabir; Barnwal, Manish Kumar

2018-04-01

Hydraulic power system is generally used in off-road vehicles for power transmission such as Heavy Earth Moving Machineries (HEMM). Their energy efficiency and unsubstantial failure becomes an extensive subject of analysis. Various arrangements in the system are compassed along with the utilization of some appropriate components. Application of a hydraulic accumulator is one among them. Benefits of accumulator is its multi-purpose usages like energy saving and pressure surge damping. This paper deals with the control of pressure surges in the hydraulic system and energy saving from the surges by using accumulator. For this purpose, the simulation of the hydraulic system is done in MATLAB/SimulinkR environment and an external disturbance is introduced to generate the pressure surge. The surge absorptivity of the accumulator is studied for different sizes at different pre-charged conditions of the accumulator. The discharge characteristics of different sized accumulators are also analyzed in this paper. It is observed that the ability to absorb the surge and stabilize the system is high in the smaller capacity accumulator. However the energy delivery time of larger sized accumulator is high.

Enhanced accumulation of adipocytes in bone marrow stromal cells in the presence of increased extracellular and intracellular [Ca{sup 2+}

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hashimoto, Ryota, E-mail: hryota@juntendo.ac.jp; Katoh, Youichi, E-mail: katoyo@juntendo-urayasu.jp; Nakamura, Kyoko

2012-07-13

Highlights: Black-Right-Pointing-Pointer High [Ca{sup 2+}]{sub o} enhances adipocyte accumulation in the presence of adipogenic inducers. Black-Right-Pointing-Pointer High [Ca{sup 2+}]{sub o} enhances both proliferation and adipocyte differentiation in BMSCs. Black-Right-Pointing-Pointer High [Ca{sup 2+}]{sub o} induces an increase in [Ca{sup 2+}]{sub o} in BMSCs. Black-Right-Pointing-Pointer An intracellular Ca{sup 2+} chelator suppresses the enhancement in adipocyte accumulation. Black-Right-Pointing-Pointer Controlling [Ca{sup 2+}]{sub o} may govern the balance of adipocyte and osteoblast development. -- Abstract: The bone marrow stroma contains osteoblasts and adipocytes that have a common precursor: the pluripotent mesenchymal stem cell found in bone marrow stromal cells (BMSCs). Local bone marrow Ca{sup 2+}more » levels can reach high concentrations due to bone resorption, which is one of the notable features of the bone marrow stroma. Here, we describe the effects of high [Ca{sup 2+}]{sub o} on the accumulation of adipocytes in the bone marrow stroma. Using primary mouse BMSCs, we evaluated the level of adipocyte accumulation by measuring Oil Red O staining and glycerol-3-phosphate dehydrogenase (GPDH) activity. High [Ca{sup 2+}]{sub o} enhanced the accumulation of adipocytes following treatment with both insulin and dexamethasone together but not in the absence of this treatment. This enhanced accumulation was the result of both the accelerated proliferation of BMSCs and their differentiation into adipocytes. Using the fura-2 method, we also showed that high [Ca{sup 2+}]{sub o} induces an increase in [Ca{sup 2+}]{sub i}. An intracellular Ca{sup 2+} chelator suppressed the enhancement in adipocyte accumulation due to increased [Ca{sup 2+}]{sub o} in BMSCs. These data suggest a new role for extracellular Ca{sup 2+} in the bone marrow stroma: increased [Ca{sup 2+}]{sub o} induces an increase in [Ca{sup 2+}]{sub i} levels, which in turn enhances the accumulation of adipocytes under certain conditions.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mittermayr, Florian, E-mail: f.mittermayr@tugraz.at; Baldermann, Andre; Kurta, Christoph

Understanding the mechanisms leading to chemical attack on concrete is crucial in order to prevent damage of concrete structures. To date, most studies on sulfate attack and thaumasite formation are based on empirical approaches, as the identification of associated reaction mechanisms and paths is known to be highly complex. In this study, sulfate damaged concrete from Austrian tunnels was investigated by mineralogical, chemical and isotope methods to identify the reactions which caused intense concrete alteration. Major, minor and trace elemental contents as well as isotope ratios of local ground water (GW), drainage water (DW) and interstitial solutions (IS), extracted frommore » damaged concrete material, were analyzed. Locally occurring GW contained 3 to 545 mg L{sup −1} of SO{sub 4} and is thus regarded as slightly aggressive to concrete in accordance to standard specifications (e.g. DIN EN 206-1). The concrete linings and drainage systems of the studied tunnels, however, have partly suffered from intensive sulfate attack. Heavily damaged concrete consisted mainly of thaumasite, secondary calcite, gypsum, and relicts of aggregates. Surprisingly, the concentrations of dissolved ions were extremely enriched in the IS with up to 30,000 and 12,000 mg L{sup −1} of SO{sub 4} and Cl, respectively. Analyses of aqueous ions with a highly conservative behavior, e.g. K, Rb and Li, as well as {sup 2}H/H and {sup 18}O/{sup 16}O isotope ratios of H{sub 2}O of the IS showed an intensive accumulation of ions and discrimination of the light isotopes vs. the GW. These isotope signals of the IS clearly revealed evaporation at distinct relative humidities. From ion accumulation and isotope fractionation individual total and current evaporation degrees were estimated. Our combined elemental and isotopic approach verified wetting–drying cycles within a highly dynamic concrete-solution-atmosphere system. Based on these boundary conditions, key factors controlling thaumasite formation are discussed regarding the development of more sulfate-resistant concrete and concrete structures.« less

Low-frequency noise in multilayer MoS2 field-effect transistors: the effect of high-k passivation.

PubMed

Na, Junhong; Joo, Min-Kyu; Shin, Minju; Huh, Junghwan; Kim, Jae-Sung; Piao, Mingxing; Jin, Jun-Eon; Jang, Ho-Kyun; Choi, Hyung Jong; Shim, Joon Hyung; Kim, Gyu-Tae

2014-01-07

Diagnosing of the interface quality and the interactions between insulators and semiconductors is significant to achieve the high performance of nanodevices. Herein, low-frequency noise (LFN) in mechanically exfoliated multilayer molybdenum disulfide (MoS2) (~11.3 nm-thick) field-effect transistors with back-gate control was characterized with and without an Al2O3 high-k passivation layer. The carrier number fluctuation (CNF) model associated with trapping/detrapping the charge carriers at the interface nicely described the noise behavior in the strong accumulation regime both with and without the Al2O3 passivation layer. The interface trap density at the MoS2-SiO2 interface was extracted from the LFN analysis, and estimated to be Nit ~ 10(10) eV(-1) cm(-2) without and with the passivation layer. This suggested that the accumulation channel induced by the back-gate was not significantly influenced by the passivation layer. The Hooge mobility fluctuation (HMF) model implying the bulk conduction was found to describe the drain current fluctuations in the subthreshold regime, which is rarely observed in other nanodevices, attributed to those extremely thin channel sizes. In the case of the thick-MoS2 (~40 nm-thick) without the passivation, the HMF model was clearly observed all over the operation regime, ensuring the existence of the bulk conduction in multilayer MoS2. With the Al2O3 passivation layer, the change in the noise behavior was explained from the point of formation of the additional top channel in the MoS2 because of the fixed charges in the Al2O3. The interface trap density from the additional CNF model was Nit = 1.8 × 10(12) eV(-1) cm(-2) at the MoS2-Al2O3 interface.

Microbial diversity of extreme habitats in human homes.

PubMed

Savage, Amy M; Hills, Justin; Driscoll, Katherine; Fergus, Daniel J; Grunden, Amy M; Dunn, Robert R

2016-01-01

High-throughput sequencing techniques have opened up the world of microbial diversity to scientists, and a flurry of studies in the most remote and extreme habitats on earth have begun to elucidate the key roles of microbes in ecosystems with extreme conditions. These same environmental extremes can also be found closer to humans, even in our homes. Here, we used high-throughput sequencing techniques to assess bacterial and archaeal diversity in the extreme environments inside human homes (e.g., dishwashers, hot water heaters, washing machine bleach reservoirs, etc.). We focused on habitats in the home with extreme temperature, pH, and chemical environmental conditions. We found a lower diversity of microbes in these extreme home environments compared to less extreme habitats in the home. However, we were nonetheless able to detect sequences from a relatively diverse array of bacteria and archaea. Habitats with extreme temperatures alone appeared to be able to support a greater diversity of microbes than habitats with extreme pH or extreme chemical environments alone. Microbial diversity was lowest when habitats had both extreme temperature and one of these other extremes. In habitats with both extreme temperatures and extreme pH, taxa with known associations with extreme conditions dominated. Our findings highlight the importance of examining interactive effects of multiple environmental extremes on microbial communities. Inasmuch as taxa from extreme environments can be both beneficial and harmful to humans, our findings also suggest future work to understand both the threats and opportunities posed by the life in these habitats.

Ecotoxicological damage from zinc smelting at Palmerton, Pennsylvania

USGS Publications Warehouse

Beyer, W. Nelson; Storm, Gerald L.; Hoffman, David J.; Rattner, Barnett A.; Burton, G. Allen; Cairns, John

1995-01-01

The two zinc smelters at Palmerton, PA emitted huge amounts of contaminants ( 260,000 t of Zn, 3,300 t of Cd, 6,800 t of Pb) to the air and severely damaged the forest on Blue Mountain. The high Zn concentrations in soil killed tree seedlings by inhibiting root elongation. The result was a forest with too few young trees. When natural stresses such as fire challenged the forest, the forest failed to regenerate, and the exposed soil eroded down the steep slopes. Tree species that could sprout were favored over those that developed from seeds. As a result of high zinc concentrations, the lichen and moss communities were depauperate for at least 20 km along Blue Mountain. The denuded areas are in the process of being reclaimed with the addition of a mixture of fly ash and sewage sludge, which is seeded with grasses tolerant to the harsh conditions. In preliminary experiments, the fly ash and sewage sludge mixture was stable, despite the steepness of the slopes of the reclaimed sites on Blue Mountain. Zinc emissions reduced the decomposition rate of plant material on Blue Mountain. The partially decomposed litter, in particular, accumulated on the surface of the mineral soil. The populations of both microorganisms and arthropods were greatly reduced in soils near the smelters. Samples of litter collected from sites spanning 30 km were toxic to woodlice, and Zn was shown to be the toxic factor. A white-tailed deer examined had a very high renal Zn concentration and an articular lesion in one of its hind legs that closely resembled the lesions reported in Zn-poisoned horses. Zinc concentrations were regulated in wildlife tissues and were not reliable indicators of exposure, except in extreme cases. Two songbirds, a shrew, and several rabbits contained Pb concentrations that were suggested to be toxic. Shrews and ground-feeding songbirds accumulated relatively high concentrations of Pb. Exposure to Pb seemed to be related to the amount of soil that an animal ingests. Some white-tailed deer and cottontails had renal Cd concentrations near 600 ppm w.w., which is associated with renal damage in other mammals. The accumulation of Cd was greatest in wildlife that lived longest. The destruction of the habitat for wildlife on Blue Mountain decreased wildlife populations. Populations of insectivorous birds, however, were depressed well beyond the area of obvious damage to the forest. Forest-floor salamanders were completely absent from study sites spanning 18 km along Blue Mountain. Actual reductions in wildlife populations were much greater than would have been predicted from habitat suitability models alone.

Comparative transcriptome analysis reveals a global insight into molecular processes regulating citrate accumulation in sweet orange (Citrus sinensis).

PubMed

Lu, Xiaopeng; Cao, Xiongjun; Li, Feifei; Li, Jing; Xiong, Jiang; Long, Guiyou; Cao, Shangyin; Xie, Shenxi

2016-12-01

Citrate, the predominant organic acid in citrus, determines the taste of these fruits. However, little is known about the synergic molecular processes regulating citrate accumulation. Using 'Dahongtiancheng' (Citrus sinensis) and 'Bingtangcheng' (C. sinensis) with significant difference in citrate, the objectives of this study were to understand the global mechanisms of high-citrate accumulation in sweet orange. 'Dahongtiancheng' and 'Bingtangcheng' exhibit significantly different patterns in citrate accumulation throughout fruit development, with the largest differences observed at 50-70 days after full bloom (DAFB). Comparative transcriptome profiling was performed for the endocarps of both cultivars at 50 and 70 DAFB. Over 34.5 million clean reads per library were successfully mapped to the reference database and 670-2630 differentially expressed genes (DEGs) were found in four libraries. Among the genes, five transcription factors were ascertained to be the candidates regulating citrate accumulation. Functional assignments of the DEGs indicated that photosynthesis, the citrate cycle and amino acid metabolism were significantly altered in 'Dahongtiancheng'. Physiological and molecular analyses suggested that high photosynthetic efficiency and partial impairment of citrate catabolism were crucial for the high-citrate trait, and amino acid biosynthesis was one of the important directions for citrate flux. The results reveal a global insight into the gene expression changes in a high-citrate compared with a low-citrate sweet orange. High accumulating efficiency and impaired degradation of citrate may be associated with the high-citrate trait of 'Dahongtiancheng'. Findings in this study increase understanding of the molecular processes regulating citrate accumulation in sweet orange. © 2016 Scandinavian Plant Physiology Society.

Physicochemical characterization of smoke aerosol during large-scale wildfires: Extreme event of August 2010 in Moscow

NASA Astrophysics Data System (ADS)

Popovicheva, O.; Kistler, M.; Kireeva, E.; Persiantseva, N.; Timofeev, M.; Kopeikin, V.; Kasper-Giebl, A.

2014-10-01

Enhancement of biomass burning-related research is essential for the assessment of large-scale wildfires impact on pollution at regional and global scale. Starting since 6 August 2010 Moscow was covered with thick smoke of unusually high PM10 and BC concentrations, considerably affected by huge forest and peat fires around megacity. This work presents the first comprehensive physico-chemical characterization of aerosols during extreme smoke event in Moscow in August 2010. Sampling was performed in the Moscow center and suburb as well as one year later, in August 2011 during a period when no biomass burning was observed. Small-scale experimental fires of regional biomass were conducted in the Moscow region. Carbon content, functionalities of organic/inorganic compounds, tracers of biomass burning (anhydrosaccharides), ionic composition, and structure of smoke were analyzed by thermal-optical analysis, FTIR spectroscopy, liquid and ion chromatography, and electron microscopy. Carbonaceous aerosol in August 2010 was dominated by organic species with elemental carbon (EC) as minor component. High average OC/EC near 27.4 is found, comparable to smoke of regional biomass smoldering fire, and exceeded 3 times the value observed in August 2011. Organic functionalities of Moscow smoke aerosols were hydroxyl, aliphatic, aromatic, acid and non-acid carbonyl, and nitro compound groups, almost all of them indicate wildfires around city as the source of smoke. The ratio of levoglucosan (LG) to mannosan near 5 confirms the origin of smoke from coniferous forest fires around megacity. Low ratio of LG/OC near 0.8% indicates the degradation of major molecular tracer of biomass burning in urban environment. Total concentration of inorganic ions dominated by sulfates SO4 2 - and ammonium NH4+ was found about 5 times higher during large-scale wildfires than in August 2011. Together with strong sulfate and ammonium absorbance in smoke aerosols, these observations prove the formation of secondary inorganic species associated with wildfire gaseous emissions and their transformation in aged smoke. Accumulation of carbonyl compounds during extreme smoke event in Moscow resulted from photochemical aging and secondary organic aerosol (SOA) formation in the urban atmosphere. The mixture of carbonaceous particles and dust revealed multicomponent structure of Moscow smoke aerosols, pointing the difference with non-smoke ambient aerosols. The abundance of group containing soot and tar balls approached at least a half of total aerosol concentration during extreme event, relating to elevated OC, EC and SOA. Fly ash groups contained calcium sulfates and carbonates from soil entrainment by hot air convection. Small-scale open fire experiments support the identification of specific chemical features of regional biomass burning and demonstrate the strong impact of large-scale wildfires on aerosol chemistry and air quality in highly polluted megacity.

Mechanical characterization of alloys in extreme conditions of high strain rates and high temperature

NASA Astrophysics Data System (ADS)

Cadoni, Ezio

2018-03-01

The aim of this paper is the description of the mechanical characterization of alloys under extreme conditions of temperature and loading. In fact, in the frame of the Cost Action CA15102 “Solutions for Critical Raw Materials Under Extreme Conditions (CRM-EXTREME)” this aspect is crucial and many industrial applications have to consider the dynamic response of materials. Indeed, for a reduction and substitution of CRMs in alloys is necessary to design the materials and understand if the new materials behave better or if the substitution or reduction badly affect their performance. For this reason, a deep knowledge of the mechanical behaviour at high strain-rates of considered materials is required. In general, machinery manufacturing industry or transport industry as well as energy industry have important dynamic phenomena that are simultaneously affected by extended strain, high strain-rate, damage and pressure, as well as conspicuous temperature gradients. The experimental results in extreme conditions of high strain rate and high temperature of an austenitic stainless steel as well as a high-chromium tempered martensitic reduced activation steel Eurofer97 are presented.

Geomorphic influences on the contribution of vegetation to soil C accumulation and accretion in Spartina alterniflora marshes

NASA Astrophysics Data System (ADS)

Elsey-Quirk, Tracy; Unger, Viktoria

2018-01-01

Salt marshes are important hotspots of long-term belowground carbon (C) storage, where plant biomass and allochthonous C can be preserved in the soil for thousands of years. However, C accumulation rates, as well as the sources of C, may differ depending on environmental conditions influencing plant productivity, allochthonous C deposition, and C preservation. For this study, we examined the relationship between belowground root growth, turnover, decay, above- and belowground biomass, and previously reported longer-term rates of total, labile, and refractory organic C accumulation and accretion in Spartina alterniflora-dominated marshes across two mid-Atlantic, US estuaries. Tidal range, long-term rates of mineral sedimentation, C accumulation, and accretion were higher and salinities were lower in marshes of the coastal plain estuary (Delaware Bay) than in the coastal lagoon (Barnegat Bay). We expected that the conditions promoting high rates of C accumulation would also promote high plant productivity and greater biomass. We further tested the influence of environmental conditions on belowground growth (roots + rhizomes), decomposition, and biomass of S. alterniflora. The relationship between plant biomass and C accumulation rate differed between estuaries. In the sediment-limited coastal lagoon, rates of total, labile, and refractory organic C accumulation were directly and positively related to above- and belowground biomass. Here, less flooding and a higher mineral sedimentation rate promoted greater above- and belowground biomass and, in turn, higher soil C accumulation and accretion rates. In the coastal plain estuary, the C accumulation rate was related only to aboveground biomass, which was positively related to the rate of labile C accumulation. Soil profiles indicated that live root and rhizome biomass was positively associated with labile C density for most marshes, yet high labile C densities below the live root zone and in marshes with high mineral sedimentation rates and low biomass signify the potential contribution of allochthonous C and the preservation of labile C. Overall, our findings illustrate the importance of sediment supply to marshes both for promoting positive plant-C accumulation-accretion feedbacks in geomorphic settings where mineral sediment is limiting and for promoting allochthonous inputs and preservation of labile C leading to high C accumulation and accretion rates in geomorphic settings where sediment supply is abundant.

The Paleocene-Eocene "Greenhouse" Arctic Ocean paleoenvironment: Implications from biomarker results from IODP Expedition 302 (ACEX)

NASA Astrophysics Data System (ADS)

Weller, P.; Stein, R.

2006-12-01

In order to reconstruct the long-term Cenozoic climate history of the central Arctic Ocean and its role in earth's transition from Paleogene greenhouse to the Neogene icehouse conditions, IODP Expedition 302 (Arctic Ocean Coring Experiment ACEX) visited the Lomonosov Ridge in August 2004. Here, we present new data of organic-geochemical compounds determined in ACEX sediment samples to identify organic matter sources and biomarker proxies to decipher processes controlling organic-carbon accumulation and their paleo- environmental significance. Of special interest was the reconstruction of organic carbon composition, preservation and accumulation (i.e. high productivity vs. anoxia vs. terrigenous input) during periods of extreme global warmth and proposed increased freshwater discharge in the early Cenozoic. Specific source-related biomarkers (e.g. n-alkanes, fatty acids, isoprenoids, carotenoids, steranes/sterenes, hopanes/hopenes, hopanoic acids, aromatic terpenoids, benzohopanes, long-chain alkenones, organic sulfur compounds) and Rock-Eval parameters were determined in the ACEX sediment samples, ranging from the late Paleocene to the middle Miocene in age. The records show highly variable TOC-contents and a large variety and variability of compounds derived from marine, terrestrial and bacterial origin. The distribution of hopanoic acid isomers was dominated by compounds with the biological 17 beta (H), 21 beta (H) configuration indicating a low level of maturity, which was in good agreement with the data from Rock-Eval pyrolysis. Based on the biomarker data, the terrestrial organic matter supply was significantly enriched during the late Paleocene and part of the early Eocene, whereas n-alkanes and n-fatty acids in samples from the PETM and Elmo events as well as the middle Eocene indicate increased aquatic contributions. Furthermore samples from the middle Eocene were characterized by the occurrence of long-chain alkenones, high proportions of lycopane and high ratios (>0.6) of (n-C35+lycopane)/n-C31. Interestingly, lycopane which might indicate photic-zone anoxia was not detected in co-occurrence with highly source-specific isorenieratene derivates.The occurrence in samples of the "freshwater" Azolla-event suggest that lycopane was more likely derived from freshwater algae (Botriococcus braunii, race L genus).

Study of Extreme Weather Hazards Using GRACE

NASA Astrophysics Data System (ADS)

Zhang, Y.; Shum, C. K.; Shang, K.; Guo, J.; Schwartz, F. W.; Akyılmaz, O.; Feng, W.; Forootan, E.; LIU, G.; Zhong, M.

2017-12-01

Extreme weather events significantly affect humans and economics in the region. Synoptic and timely observations of these abrupt meteoro-hydrological hazards would benefit disaster management and improve storm forecasting. Contemporary processing of the Gravity Recovery and Climate Experiment (GRACE) twin-satellite data at monthly sampling would miss or under-sample abrupt events such as large ice storms with durations much shorter than a month. Here, we employ the energy balance approach processing GRACE Level 1 data, which is flexible to allow sub-monthly solutions at daily sampling covering the genesis and evolution of large winter storms. We studied the 2008 Southeast China snow and ice storm, which lasted from mid-January to mid-February, and affected 21 out of China's 34 provinces with heavy snows, ice and freezing rains, caused extensive damage and transportation disruption, displaced nearly 1.7 million people, and claimed 129 lives. We also investigated the devastating North America blizzard which occurred during late January through mid-February 2010. The massive accumulations of snow and ice in both storms slightly changed the gravity field of the Earth, and were sensitive to the GRACE satellite measurements, manifested as transient terrestrial water storage (TWS) change. We compared our solutions with other available high temporal frequency GRACE solutions. The GRACE observed total storage change for both storms are in good agreement with in situ precipitation measurements, and with GRACE observations clearly show the complex genesis, decline, strengthening and melting phases depicting the detailed evolution of these example large snow storms.