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Sample records for accumulation factor bsaf

  1. Direct Extrapolation of Biota-sediment Accumulation Factors (BSAFs)

    EPA Science Inventory

    Biota-sediment accumulation factors (BSAFs) for fish and shellfish were extrapolated directly from one location and species to other species, to other locations within a site, to other sites, and their combinations. The median errors in the extrapolations across species at a loc...

  2. Estimation of Biota Sediment Accumulation Factor (BSAF) from Paired Observations of Chemical Concentrations in Biota and Sediment (Final Report)

    EPA Science Inventory

    In March 2009, EPA's Ecological Risk Assessment Support Center (ERASC) released the final report entitled, Estimation of Biota Sediment Accumulation Factor (BSAF) from Paired Observations of Chemical Concentrations in Biota and Sediment. This report was written in response...

  3. Biota-sediment accumulation factor (BSAF), bioaccumulation factor (BAF), and contaminant levels in prey fish to indicate the extent of PAHs and OCPs contamination in eggs of waterbirds.

    PubMed

    Kwok, C K; Liang, Y; Leung, S Y; Wang, H; Dong, Y H; Young, L; Giesy, J P; Wong, M H

    2013-12-01

    Samples of pond sediment, fish, and shrimp were collected from the Ramsar site at Mai Po marshes, Hong Kong (south China), and samples of pond sediment, fish, and shrimp, as well as eggs of water birds (Chinese Pond Herons (Ardeola bacchus) and Little Egrets (Egretta garzetta)), were collected from two smaller wetland sites at Jiangsu Province (mid-China), between 2004 and 2007. Accumulation levels of polycyclic aromatic hydrocarbons (PAHs) and organochlorine pesticides (OCPs) in the biota were used to calculate biota-sediment accumulation factor (BSAF) and bioaccumulation factor (BAF). For fish and shrimp, BSAFs of OCPs (3.8-56) were greater than those of PAHs (0.12-6.3). BSAFs and BAFs of 11-79 and 4-34, respectively, were registered for OCPs in eggs of the birds and were greater than those for PAHs (0.11-1.5 and 0.02-1.3, respectively). Assuming that fish were the main prey of the birds, greater bioaccumulation of OCPs was detected for both bird species (BAFs =4.5-34), while accumulation of PAHs was only detected in Little Egret (BAF=1.3). A significant linear relationship (p<0.01) was observed between concentrations of OCPs in bird eggs and in the prey fish. The present study provides a new possibility of using OCP levels detected in prey fish to predict the extent of OCPs contamination in eggs of waterbirds including the endangered species, as a noninvasive method.

  4. DESIGN OF FIELD STUDIES FOR THE MEASUREMENT OF BAFS AND BSAFS.

    EPA Science Inventory

    Bioaccumulation factors (BAFs) and biota-sediment accumulation factors (BSAFs) for aquatic organisms are necessary parameters for assessing the ecological risks of nonpolar organic chemicals in aquatic ecosystems. In designing a field study to measure BAFs and/or BSAFs, one of th...

  5. FACTORS INFLUENCING THE DESIGN OF BIOACCUMULATION FACTOR AND BIOTA-SEDIMENT ACCUMULATION FACTOR FIELD STUDIES

    EPA Science Inventory

    General guidance for designing field studies to measure bioaccumulation factors (BAFs) and biota-sediment accumulation factors (BSAFs) is not available. To develop such guidance, a series of modeling simulations were performed to evaluate the underlying factors and principles th...

  6. FACTORS INFLUENCING THE DESIGN OF BIOACCUMULATION FACTOR AND BIOTA-SEDIMENT ACCUMULATION FACTOR FIELD STUDIES

    EPA Science Inventory

    A series of modeling simulations were performed to develop an understanding of the underlying factors and principles involved in developing field sampling designs for measuring bioaccumulation factors (BAFs) and biota-sediment accumulation factors (BSAFs. These simulations reveal...

  7. Evaluation of PCB and hexachlorobenzene biota-sediment accumulation factors based on ingested sediment in a deposit-feeding clam

    SciTech Connect

    Boese, B.L.; Lee, H. II; Specht, D.T.; Randall, R.; Pelletier, J.

    1996-09-01

    Contaminated sediment exposure experiments were conducted using a marine deposit-feeding clam (Macoma nasuta) to determine biota-sediment accumulation factors (BSAFs) based on ingested sediment and fecal organic carbon. Internal, or gut, BSAFs were determined for hexachlorobenzene and 13 polychlorinated biphenyl congeners and were compared to those found with the standard method of calculating BSAFs, which uses the organic carbon and contaminant concentration of the whole or external sediment. The results of these experiments indicated that gut BSAFs were consistently smaller and less variable across sediment types than the corresponding standard BSAFs. Although these results indicate that using ingested sediment concentrations and fecal total organic carbon to calculate gut BSAFs might improve the predictive ability of the standard BSAF model, the benefit is small when compared to the difficulty in measuring the contaminant concentration on ingested sediment and the organic carbon content of feces.

  8. National-scale, field-based evaluation of the biota - Sediment accumulation factor model

    USGS Publications Warehouse

    Wong, C.S.; Capel, P.D.; Nowell, L.H.

    2001-01-01

    The biota - sediment accumulation factor (BSAF) model has been suggested as a simple tool to predict bioaccumulation of hydrophobic organic compounds (HOCs)in fish and other aquatic biota from measured concentrations in sediment based on equilibrium partitioning between the sediment organic carbon and biotic lipid pools. Currently, evaluation of this model as a predictive tool has been limited to laboratory studies and small-scale field studies, using a limited number of biotic species. This study evaluates the model, from field data, for a suite of organochlorine HOCs from paired fluvial sediment and biota (fish and bivalves) samples throughout the United States and over a large range of biotic species. These data represent a real-world, worst-case scenario of the model because environmental variables are not controlled. Median BSAF values for fish (3.3) and bivalves (2.8) were not statistically different but are higher than theoretically predicted values (1-2). BSAF values varied significantly in a few species. Differences in chemical-specific BSAF values were not observed in bivalves but were statistically significant in fish. The HOCs with differing BSAF values were those known to be biotransformed. Sediment organic carbon content and biota lipid content had no effect on BSAF values in fish and only a weak effect in bivalves. This study suggests that the BSAF model could be useful under in situ riverine conditions as a first-level screening tool for predicting bioaccumulation; however, variability in BSAF values may impose limits on its utility.

  9. PCB congeners and hexachlorobenzene biota sediment accumulation factors for Macoma nasuta exposed to sediments with different total organic carbon contents

    SciTech Connect

    Boese, B.L.; Lee, H. II; Randall, R. . Pacific Ecosystems Branch); Winsor, M.; Echols, S.; Pelletier, J. . Hatfield Marine Science Center)

    1995-02-01

    Deposit-feeding marine clams (Macoma nasuta) were exposed for 119 d to three sediment types that varied in total organic carbon (TOC) from 0.8 to 2.5%. Sediments were spiked with equal concentrations of 13 polychlorinated biphenyl congeners and hexachlorobenzene. Tissue residues were measured, and steady-state bioaccumulation factors (BAFs), the corresponding lipid, and TOC-normalized biota sediment accumulation factors (BSAFs) were determined. The BSAFs were less variable than were the BAFs with the exception of compounds with log K[sub ow] > 7. Many of the BSAFs exceeded 1.7, which is a calculated maximum value based on partitioning alone. Although BSAFs varied with sediment type and compound, the use of a BSAF of 4 as a screening level for neutral organic compounds in assessing dredge materials is supported by the present study.

  10. BSAFs and Food Web Modeling for Establishing Contaminant Relationships between Biota and Sediment

    EPA Science Inventory

    The presentation will cover how to measure and evaluate BSAFs (biota-sediment accumulation factors), and how to construct, calibrate, validate, and evaluate food web models. The presentation will also discuss the advantages of the two approaches for establishing contaminant rel...

  11. Comparing Laboratory and Field Measured Biota-sediment Accumulation Factors

    EPA Science Inventory

    The report presents a review of studies where biota-sediment accumulation factors (BSAFs) were measured in the field, and the same sediment samples were tested in the laboratory using sediment bioaccumulation testing protocols. The focus of this review was to document the extent...

  12. Steady-state model of biota sediment accumulation factor for metals in two marine bivalves

    SciTech Connect

    Thomann, R.V.; Mahony, J.D.; Mueller, R.

    1995-11-01

    A model of the biota sediment accumulation factor (BSAF) is developed to relate the ratio of metal concentrations in two marine bivalves (Crassostrea virginica and Mytilus edulis) to sediment metal concentration. A generalized metal BSAF can be approximated by a simple relationship that is a function of sediment to water column partitioning, the bioconcentration factor (BCF), the depuration rate, the metal assimilation efficiency from food, the bivalve feeding rate, and the growth rate. Analyses of Mussel Watch data indicate that the medium BSAF across stations varies by about three orders of magnitude from Zn, Cd, and Cu at the highest levels of BSAF = 1 to 10, while Cr has the lowest BSAF at 0.01. Total Hg is about 1.0 and Ni and Pb are approximately 0.1. Calibration of the model indicates that the food route of metal accumulation is significant for all metals but specially for Zn, Cd, Cu, and Hg where virtually all of the observed BSAF is calculated to be due to ingestion of metal from food in the overlying water. These results indicate a potential significance of the metal-binding protein metallothionein, which results in relatively high binding of metal and resulting low depuration rates.

  13. SOME BIOACCUMULATION FACTORS AND BIOTA-SEDIMENT ACCUMULATION FACTORS FOR POLYCYCLIC AROMATIC HYDROCARBONS IN LAKE TROUT

    EPA Science Inventory

    Bioaccumulation factors (BAFs) and biota-sediment accumulation factors (BSAFs) for phenanthrene, fluoranthene, pyrene, benz[a]anthracene, and chrysene/triphenylene were calculated using the tissue data of Zabik et al. for Salvelinus namaycush siscovet with 20.5% lipid content, th...

  14. Direct Application of Biota-sediment Accumulation Factors

    EPA Science Inventory

    Biota-sediment bioaccumulation factors (BSAFs) relate chemical residues in fish to chemical concentrations in contaminated sediments. BSAFs used by EPAs Office of Water in developing water quality criteria and by EPAs Superfund program in performing risk assessments for sites wi...

  15. Some bioaccumulation factors and biota-sediment accumulation factors for polycyclic aromatic hydrocarbons in Lake Trout

    SciTech Connect

    Burkhard, L.P.; Lukasewycz, M.T.

    2000-05-01

    Bioaccumulation factors (BAFs) and biota-sediment accumulation factors (BSAFs) for phenanthrene, fluoranthene, pyrene, benz[a]anthracene, and chrysene/triphenylene were calculated using the tissue data of Zabik et al. for Salvelinus namaycush siscowet with a 20.5% lipid content, the water data of Baker and Eisenreich, and the sediment data of Baker and Eisenreich for the Lake Superior ecosystem. Log BAFs, both lipid normalized and based on the freely dissolved concentration of the chemical in the water, of 1.95, 3.22, 4.72, 4.73, and 3.61 were calculated for phenanthrene, fluoranthene, pyrene, benz[a]anthracene, and chrysene/triphenylene, respectively. The BSAFs for phenanthrene, fluoranthene, pyrene, benz[a]anthracene, and chrysene/tripenylene were 0.00011, 0.00016, 0.0071, 0.0054, and 0.00033, respectively.

  16. Biota--sediment accumulation factors for polychlorinated biphenyls, dibenzo-p-dioxins, and dibenzofurans in southern Lake Michigan lake trout (Salvelinus namaycush).

    PubMed

    Burkhard, Lawrence P; Cook, Philip M; Lukasewycz, Marta T

    2004-10-15

    A set of high-quality, age-specific biota-sediment accumulation factors (BSAFs) for polychlorinated biphenyls (PCBs), dibenzo-p-dioxins (PCDDs), and dibenzofurans (PCDFs) have been determined from concentrations measured with high-resolution gas chromatography/high-resolution mass spectrometry, by use of the 13C isotopic dilution technique, in lake trout and surficial (0-2 cm) sediment samples from southern Lake Michigan. BSAFs ranged from <0.1 to 18 for PCBs and from <0.001 to 0.32 for PCDDs and PCDFs detected in the fish. PCBs with zero or one chlorine in an ortho position had smaller BSAFs than other PCBs. PCDDs and PCDFs with chlorines at the 2,3,7,8-positions had larger BSAFs than most other PCDDs and PCDFs. The fidelity of the relative bioaccumulation potential data between independent lake trout samples, within and among age classes, suggests that differences in slight rates of net metabolism in the food chain are important and contribute to the apparent differences in BSAFs, not only for PCDDs and PCDFs but also possibly for some PCBs. A complicating factor for non-ortho- and mono-ortho-PCBs is the uncertain contribution of enhanced affinity for black carbon (and possibly volatility) acting in concert with metabolism to reduce measured BSAFs for lake trout. On the basis of the association between chemicals with apparent slight rates of metabolism and measured dioxin-like toxicity, several PCDFs with similar measured BSAFs but unknown toxicity may be candidates for toxicity testing.

  17. BIOTA-SEDIMENT ACCUMULATION FACTORS FOR POLYCHLORINATED BIPHENYLS, DIBENZO-P-DIOXINS, AND DIBENZOFURANS IN SOUTHERN LAKE MICHIGAN LAKE TROUT (SALVELINUS NAMAYCUSH)

    EPA Science Inventory

    A set of high-quality, age-specific biota-sediment accumulation factors (BSAFs) for polychlorinated biphenyls (PCBs), dibenzo-p-dioxins (PCDDs), and dibenzofurans (PCDFs) have been determined from concentrations measured with high-resolution gas chroma tography/high-resolution ma...

  18. Idaho National Engineering Laboratory (INEL) Environmental Restoration Program (ERP), Baseline Safety Analysis File (BSAF). Revision 1

    SciTech Connect

    Not Available

    1994-06-20

    This document was prepared to take the place of a Safety Evaluation Report since the Baseline Safety Analysis File (BSAF)and associated Baseline Technical Safety Requirements (TSR) File do not meet the requirements of a complete safety analysis documentation. Its purpose is to present in summary form the background of how the BSAF and Baseline TSR originated and a description of the process by which it was produced and approved for use in the Environmental Restoration Program.The BSAF is a facility safety reference document for INEL environmental restoration activities including environmental remediation of inactive waste sites and decontamination and decommissioning (D&D) of surplus facilities. The BSAF contains safety bases common to environmental restoration activities and guidelines for performing and documenting safety analysis. The common safety bases can be incorporated by reference into the safety analysis documentation prepared for individual environmental restoration activities with justification and any necessary revisions. The safety analysis guidelines in BSAF provide an accepted method for hazard analysis; analysis of normal, abnormal, and accident conditions; human factors analysis; and derivation of TSRS. The BSAF safety bases and guidelines are graded for environmental restoration activities.

  19. Biota-sediment accumulation and trophic transfer factors for extremely hydrophobic polychlorinated biphenyls

    SciTech Connect

    Maruya, K.A.; Lee, R.F.

    1998-12-01

    Polychlorinated biphenyls (PCBs) in fish, invertebrates, and sediment from a contaminated tidal creek system in coastal Georgia (USA) were traced to Aroclor 1268, a mixture of hepta through decachlorinated homologs used at a former chlor/alkali plant adjacent to the study site. The base 10 logarithm of the octanol/water partition coefficient (K{sub ow}) for the 15 most abundant Aroclor 1268 components in these samples ranged from 6.7 to >9. The composite mean biota-sediment accumulation factor (BSAF) for these congeners was 3.1, 0.81, and 0.28 for yearling striped mullet, spotted sea trout, and grass shrimp, respectively, species representing three trophic levels of the local food web. Individual congener BSAFs were negatively correlated with log K{sub ow} for all three species. The composite mean trophic transfer factor (TTF{sub lip}), defined as the ratio of lipid-normalized PCB concentrations in fish to grass shrimp, was higher for mullet (12) than for sea trout (2.9). Individual TTF{sub lip} values were two to three times higher for Cl{sub 7} and Cl{sub 8} homologs that were substituted at all four ortho positions, suggesting a difference in PCB retention based on chlorine substitution patterns. The relative magnitude of BSAFs and TTF{sub lip} values indicated that sediment-ingesting forage species like mullet efficiently accumulate PCBs and are an important link in the food web transfer of sediment-ingesting forage in this system. The negative linear relationships between BSAF and log K{sub ow} established in this study are among the first to be reported in the field for extremely hydrophobic PCBs.

  20. Mercury accumulation in sediments and seabird feathers from the Antarctic Peninsula.

    PubMed

    Calle, Paola; Alvarado, Omar; Monserrate, Lorena; Cevallos, Juan Manuel; Calle, Nastenka; Alava, Juan José

    2015-02-28

    In an effort to assess the impact of mercury in the Antarctic Peninsula, we conducted ecotoxicological research in this region during the summer of 2012 and 2013. The objectives were to assess: (a) mercury levels in sediment samples; (b) mercury accumulation in Antarctic seabird feathers: Catharacta lonnbergi (brown skua), Pygoscelis papua (gentoo penguin) and Pygoscelis antarctica (chinstrap penguin); and (c) biomagnification (BMF predator/prey) and biota sediment accumulation (BSAF skuas/sediment) factors. Mercury concentrations in sediment were relatively low. Mercury concentrations were significantly higher in brown skuas and gentoo penguins than in chinstrap penguins (2012), and significantly higher in brown skuas than in both penguins (2013). BMF indicated 2-7.5 times greater mercury levels in brown skuas than in penguins. BSAF values suggested an apparent temporal decrease of 18.2% of this ratio from 2012 to 2013. Long-range environmental transport is the likely route of entry of mercury into the Antarctic Peninsula.

  1. Idaho National Engineering Laboratory (INEL) Environmental Restoration (ER) Program Baseline Safety Analysis File (BSAF)

    SciTech Connect

    1995-09-01

    The Baseline Safety Analysis File (BSAF) is a facility safety reference document for the Idaho National Engineering Laboratory (INEL) environmental restoration activities. The BSAF contains information and guidance for safety analysis documentation required by the U.S. Department of Energy (DOE) for environmental restoration (ER) activities, including: Characterization of potentially contaminated sites. Remedial investigations to identify and remedial actions to clean up existing and potential releases from inactive waste sites Decontamination and dismantlement of surplus facilities. The information is INEL-specific and is in the format required by DOE-EM-STD-3009-94, Preparation Guide for U.S. Department of Energy Nonreactor Nuclear Facility Safety Analysis Reports. An author of safety analysis documentation need only write information concerning that activity and refer to BSAF for further information or copy applicable chapters and sections. The information and guidance provided are suitable for: {sm_bullet} Nuclear facilities (DOE Order 5480-23, Nuclear Safety Analysis Reports) with hazards that meet the Category 3 threshold (DOE-STD-1027-92, Hazard Categorization and Accident Analysis Techniques for Compliance with DOE Order 5480.23, Nuclear Safety Analysis Reports) {sm_bullet} Radiological facilities (DOE-EM-STD-5502-94, Hazard Baseline Documentation) Nonnuclear facilities (DOE-EM-STD-5502-94) that are classified as {open_quotes}low{close_quotes} hazard facilities (DOE Order 5481.1B, Safety Analysis and Review System). Additionally, the BSAF could be used as an information source for Health and Safety Plans and for Safety Analysis Reports (SARs) for nuclear facilities with hazards equal to or greater than the Category 2 thresholds, or for nonnuclear facilities with {open_quotes}moderate{close_quotes} or {open_quotes}high{close_quotes} hazard classifications.

  2. SOME BAFS AND BSAFS FOR PAHS IN LAKE TROUT

    EPA Science Inventory

    Bioaccumulation factors (BAFs) for phenanthrene, fluoranthene, pyrene, benz[a]anthracene and chrysene/triphenylene were calculated using the tissue data of Zabik et al. 1996, Food Chem, 55:231-239, and water...

  3. Characteristics of nonylphenol and bisphenol A accumulation by fish and implications for ecological and human health.

    PubMed

    Lee, Ching-Chang; Jiang, Ling-Ying; Kuo, Yi-Ling; Chen, Chung-Yu; Hsieh, Chia-Yi; Hung, Chung-Feng; Tien, Chien-Jung

    2015-01-01

    Fish populations constitute an important part of aquatic ecosystems. Thus, their accumulation of nonylphenol (NP) and bisphenol A (BPA) may pose risks to ecosystems and human health. This study analyzed the concentrations of NP and BPA in four types of fishes (i.e., wild/farmed freshwater fishes and wild/farmed marine fishes). Wild freshwater fishes contained higher concentrations of NP and BPA than the other three types of fishes. The concentrations of NP in the wild freshwater fishes ranged from 1.01 to 277 μg/kg ww, with bioconcentration factors (BCFs) and biota-sediment accumulation factors (BSAFs) ranging from 74.0 to 2.60 × 10(4)L/kg and from 0.003 to 18.3, respectively. The wild freshwater fishes contained relatively low amounts of BPA, varying from ND to 25.2 μg/kg ww, with the BCFs and BSAFs ranging from 1.00 to 274L/kg and from 0.003 to 3.40, respectively. Five fish species particularly showed high BCFs and BSAFs, indicating that they could be an important source of NP for higher trophic levels, most likely resulting in ecological risks. The demersal fishes showed a greater ability to accumulate NP than the pelagic ones. The fact that the 95th percentile values of the risk quotient (RQ) for NP and BPA were higher than the acceptable threshold indicated that these two compounds would have adverse effects on aquatic organisms in Taiwanese rivers. The consumption of wild marine fishes had the highest 95th percentile values of hazard quotient (HQ) for NP and BPA among the four types of fishes, particularly for the population aged 0-3 years. However, the 95th percentile values of HQ for NP and BPA were all less than 1, suggesting that exposure to NP and BPA through fish consumption posed no remarkable risk to human health in Taiwan.

  4. Model of biota-sediment accumulation factor for polycyclic aromatic hydrocarbons

    SciTech Connect

    Thomann, R.V.; Komlos, J.

    1999-05-01

    A model of the BSAF is constructed for PAHs using a steady-state representation of a benthic food web of a small creek. Analyses of the data collected by others on sediment, crayfish and sunfish PAH indicate that for the crayfish, the BSAF (kg org C kg lipid{sup {minus}1}) range over log K{sub ow} is relatively narrow between 0.01 and 0.1. For the sunfish, a marked decline occurs in the station average BSAF with increasing log K{sub ow} to values ranging from 0.00001 to 0.005. A separation also occurs in the behavior of the PAH groups, with the unsubstituted PAHs constituting an approximately lower bound on the entire set of PAHs. Model calibration to crayfish and sunfish BSAF is accomplished through assignment of PAH (K{sub ow}) functions derived from laboratory data. The substituted naphthalenes in contrast to the unsubstituted PAHs are calculated to behave similarly to PCBs but lower by about one order of magnitude. Analyses of the model calibration indicate that (1) relative to the sunfish, the crayfish appear to exhibit reduced metabolism and higher gut assimilation efficiencies resulting in BSAFs different from sunfish BSAFs; (2) for the sunfish, the BSAF for unsubstituted PAHs declines rapidly with increasing K{sub ow} primarily because of low gut assimilation efficiency and increased metabolism and not because of reduced bioavailability of sediment PAH; and (3) the relative contribution of the food route and water route to the BSAF varies with K{sub ow}.

  5. Wealth Accumulation and Factors Accounting for Success.

    PubMed

    Pawasutipaisit, Anan; Townsend, Robert M

    2011-03-01

    We use detailed income, balance sheet, and cash flow statements constructed for households in a long monthly panel in an emerging market economy, and some recent contributions in economic theory, to document and better understand the factors underlying success in achieving upward mobility in the distribution of net worth. Wealth inequality is decreasing over time, and many households work their way out of poverty and lower wealth over the seven year period. The accounts establish that, mechanically, this is largely due to savings rather than incoming gifts and remittances. In turn, the growth of net worth can be decomposed household by household into the savings rate and how productively that savings is used, the return on assets (ROA). The latter plays the larger role. ROA is, in turn, positively correlated with higher education of household members, younger age of the head, and with a higher debt/asset ratio and lower initial wealth, so it seems from cross-sections that the financial system is imperfectly channeling resources to productive and poor households. Household fixed effects account for the larger part of ROA, and this success is largely persistent, undercutting the story that successful entrepreneurs are those that simply get lucky. Persistence does vary across households, and in at least one province with much change and increasing opportunities, ROA changes as households move over time to higher-return occupations. But for those households with high and persistent ROA, the savings rate is higher, consistent with some micro founded macro models with imperfect credit markets. Indeed, high ROA households save by investing in their own enterprises and adopt consistent financial strategies for smoothing fluctuations. More generally growth of wealth, savings levels and/or rates are correlated with TFP and the household fixed effects that are the larger part of ROA.

  6. Wealth Accumulation and Factors Accounting for Success

    PubMed Central

    Pawasutipaisit, Anan; Townsend, Robert M.

    2010-01-01

    We use detailed income, balance sheet, and cash flow statements constructed for households in a long monthly panel in an emerging market economy, and some recent contributions in economic theory, to document and better understand the factors underlying success in achieving upward mobility in the distribution of net worth. Wealth inequality is decreasing over time, and many households work their way out of poverty and lower wealth over the seven year period. The accounts establish that, mechanically, this is largely due to savings rather than incoming gifts and remittances. In turn, the growth of net worth can be decomposed household by household into the savings rate and how productively that savings is used, the return on assets (ROA). The latter plays the larger role. ROA is, in turn, positively correlated with higher education of household members, younger age of the head, and with a higher debt/asset ratio and lower initial wealth, so it seems from cross-sections that the financial system is imperfectly channeling resources to productive and poor households. Household fixed effects account for the larger part of ROA, and this success is largely persistent, undercutting the story that successful entrepreneurs are those that simply get lucky. Persistence does vary across households, and in at least one province with much change and increasing opportunities, ROA changes as households move over time to higher-return occupations. But for those households with high and persistent ROA, the savings rate is higher, consistent with some micro founded macro models with imperfect credit markets. Indeed, high ROA households save by investing in their own enterprises and adopt consistent financial strategies for smoothing fluctuations. More generally growth of wealth, savings levels and/or rates are correlated with TFP and the household fixed effects that are the larger part of ROA. PMID:21643466

  7. MYB89 Transcription Factor Represses Seed Oil Accumulation1[OPEN

    PubMed Central

    Li, Dong; Jin, Changyu; Duan, Shaowei; Zhu, Yana; Qi, Shuanghui; Liu, Kaige; Gao, Chenhao; Ma, Haoli; Liao, Yuncheng

    2017-01-01

    In many higher plants, seed oil accumulation is precisely controlled by intricate multilevel regulatory networks, among which transcriptional regulation mainly influences oil biosynthesis. In Arabidopsis (Arabidopsis thaliana), the master positive transcription factors, WRINKLED1 (WRI1) and LEAFY COTYLEDON1-LIKE (L1L), are important for seed oil accumulation. We found that an R2R3-MYB transcription factor, MYB89, was expressed predominantly in developing seeds during maturation. Oil and major fatty acid biosynthesis in seeds was significantly promoted by myb89-1 mutation and MYB89 knockdown; thus, MYB89 was an important repressor during seed oil accumulation. RNA sequencing revealed remarkable up-regulation of numerous genes involved in seed oil accumulation in myb89 seeds at 12 d after pollination. Posttranslational activation of a MYB89-glucocorticoid receptor fusion protein and chromatin immunoprecipitation assays demonstrated that MYB89 inhibited seed oil accumulation by directly repressing WRI1 and five key genes and by indirectly suppressing L1L and 11 key genes involved in oil biosynthesis during seed maturation. These results help us to understand the novel function of MYB89 and provide new insights into the regulatory network of transcriptional factors controlling seed oil accumulation in Arabidopsis. PMID:27932421

  8. Cd, Cu, Pb and Zn in clams and sediments from an impacted estuary by the oil industry in the southwestern Gulf of Mexico: concentrations and bioaccumulation factors.

    PubMed

    Ruelas-Inzunza, J; Spanopoulos-Zarco, P; Páez-Osuna, F

    2009-12-01

    With the objective of estimating the temporal variation and bioavailability of Cd, Cu, Pb and Zn in Coatzacoalcos estuary, the biota-sediment accumulation factors (BSAF) were calculated. For this purpose, surficial sediments and clams from 14 selected sites were collected during three climatic seasons. In surficial sediments, highest levels of Cd and Cu were measured during the rainy season near to the industrial area of Minatitlan, while highest concentrations of Pb and Zn were registered during the windy season in sediments collected near to the industrial area of Coatzacoalcos. Considering all the sampling seasons and bivalve species, average metal concentrations followed the order Zn > Cu > Cd > Pb. BSAF ranged from 0.01 (Pb) in Corbicula fluminea during the hot season to 25.1 (Cd) in Polymesoda caroliniana during the windy season. BSAF of Cd, Cu and Zn were higher during the windy season; in the case of Pb, the dry season was the time when such figure was more elevated. It can be stated that Polymesoda caroliniana is a net accumulator of Cd and Zn and a weak accumulator of Pb for the studied estuary.

  9. Metal accumulation in the earthworm Lumbricus rubellus. Model predictions compared to field data

    USGS Publications Warehouse

    Veltman, K.; Huijbregts, M.A.J.; Vijver, M.G.; Peijnenburg, W.J.G.M.; Hobbelen, P.H.F.; Koolhaas, J.E.; van Gestel, C.A.M.; van Vliet, P.C.J.; Jan, Hendriks A.

    2007-01-01

    The mechanistic bioaccumulation model OMEGA (Optimal Modeling for Ecotoxicological Applications) is used to estimate accumulation of zinc (Zn), copper (Cu), cadmium (Cd) and lead (Pb) in the earthworm Lumbricus rubellus. Our validation to field accumulation data shows that the model accurately predicts internal cadmium concentrations. In addition, our results show that internal metal concentrations in the earthworm are less than linearly (slope < 1) related to the total concentration in soil, while risk assessment procedures often assume the biota-soil accumulation factor (BSAF) to be constant. Although predicted internal concentrations of all metals are generally within a factor 5 compared to field data, incorporation of regulation in the model is necessary to improve predictability of the essential metals such as zinc and copper. ?? 2006 Elsevier Ltd. All rights reserved.

  10. Accumulation and toxicokinetics of fluoranthene in sediment bioassays with freshwater amphipods

    SciTech Connect

    Driscoll, S.K.; Harkey, G.A.; Landrum, P.F.

    1997-04-01

    Two freshwater amphipods, Hyalella azteca and Diporeia sp., were exposed to sediment spiked with radiolabeled fluoranthene at nominal concentrations of 0.1 (trace) to 1,270 nmol fluoranthene/g dry weight. In two experiments, uptake kinetics and mortality were determined over 30-d exposures. Concentrations of fluoranthene in sediment and pore water were also measured. Mean survival of H. azteca was generally high, greater than 90% after 10 or 16 d, and greater than 74% after 30 d. Mean survival was lower for Diporeia, 14% after a 30-d exposure to the highest sediment concentration in experiment 1, and 53% in experiment 2. Tissue concentrations in Diporeia were as high as 2 to 4 {micro}mol/g wet weight, a body burden that could be expected to result in death by narcosis. Hyalella azteca did not typically accumulate more than 1 {micro}mol/g wet weight, which is consistent with the lower observed mortality. Apparent steady-state biota-sediment accumulation factors (BSAFs, lipid- and organic-carbon-normalized) for sediment concentrations other than trace level tended to be higher for Diporeia than for H. azteca. The BSAFs for trace levels tended to be lower for both species in comparison to higher sediment concentrations. For both organisms, the internal concentration based on body residue was a more reliable indicator of toxicity than were equilibrium partitioning predictions.

  11. Transcription factor TBX4 regulates myofibroblast accumulation and lung fibrosis

    PubMed Central

    Xie, Ting; Liang, Jiurong; Liu, Ningshan; Huan, Caijuan; Zhang, Yanli; Liu, Weijia; Kumar, Maya; Xiao, Rui; D’Armiento, Jeanine; Metzger, Daniel; Chambon, Pierre; Papaioannou, Virginia E.; Stripp, Barry R.; Jiang, Dianhua

    2016-01-01

    Progressive tissue fibrosis is a major cause of the morbidity and mortality associated with repeated epithelial injuries and accumulation of myofibroblasts. Successful treatment options are limited by an incomplete understanding of the molecular mechanisms that regulate myofibroblast accumulation. Here, we employed in vivo lineage tracing and real-time gene expression transgenic reporting methods to analyze the early embryonic transcription factor T-box gene 4 (TBX4), and determined that TBX4-lineage mesenchymal progenitors are the predominant source of myofibroblasts in injured adult lung. In a murine model, ablation of TBX4-expressing cells or disruption of TBX4 signaling attenuated lung fibrosis after bleomycin-induced injury. Furthermore, TBX4 regulated hyaluronan synthase 2 production to enable fibroblast invasion of matrix both in murine models and in fibroblasts from patients with severe pulmonary fibrosis. These data identify TBX4 as a mesenchymal transcription factor that drives accumulation of myofibroblasts and the development of lung fibrosis. Targeting TBX4 and downstream factors that regulate fibroblast invasiveness could lead to therapeutic approaches in lung fibrosis. PMID:27400124

  12. Factors influencing deoxynivalenol accumulation in small grain cereals.

    PubMed

    Wegulo, Stephen N

    2012-11-06

    Deoxynivalenol (DON) is a mycotoxin produced by the plant pathogenic fungi Fusarium graminearum and F. culmorum. These and other closely related fungi cause a disease known as Fusarium head blight (FHB) in small grain cereals. Other mycotoxins produced by FHB-causing fungi include nivalenol, T-2 toxin, and zearalenone. Ingestion of mycotoxin-contaminated food and feed can lead to toxicosis in humans and animals, respectively. DON is the predominant and most economically important of these mycotoxins in the majority of small grain-producing regions of the world. This review examines the factors that influence DON accumulation in small grain cereals from an agricultural perspective. The occurrence and economic importance of FHB and DON in small grain cereals, epidemiological factors and cereal production practices that favor FHB development and DON accumulation in grain under field conditions, and regulatory/advisory standards for DON in food and feed are discussed. This information can be used to develop strategies that reduce DON accumulation in grain before harvest and to mitigate the human and animal health risks associated with DON contamination of food and feed.

  13. Diastereomer- and enantiomer-specific accumulation, depuration, bioisomerization, and metabolism of hexabromocyclododecanes (HBCDs) in two ecologically different species of earthworms.

    PubMed

    Li, Bing; Yao, Tianqi; Sun, Hongwen; Zhang, Yanwei; Yang, Jirui

    2016-01-15

    In this study, two ecological types of earthworms were exposed to soil samples that were artificially contaminated with individual hexabromocyclododecane (HBCD) diastereomers (α-, β-, and γ-HBCDs) to investigate the bioaccumulation, depuration, enantiomer selectivity and isomerization of HBCDs in earthworms. The uptake rate constant (ku), bioaccumulation factor (BAF), biota soil accumulation factor (BSAF), and half-life (t1/2) for the α-HBCD were the highest among the three diastereomers. The bioaccumulation parameters of the three diastereoisomers differed between the two ecologically different species of earthworms. The BSAF values of α- and γ-HBCDs were substantially higher in Eisenia fetida than those in Metaphire guillelmi, with the higher lipid and protein contents in E. fetida as the primary reason for this difference. The other processes, such as uptake, depuration, metabolism and isomerization, also differed between the two species and led to a difference in the bioaccumulation of β-HBCD. The β- and γ-HBCDs were bioisomerized to α-HBCD in the earthworms, but to a greater extent in E. fetida. The highest BSAF, t1/2 of α-HBCD and the bioisomerization of β- and γ-HBCDs to α-HBCD might explain in part why α-HBCD was the dominant isomer in biota samples. Most of the enantiomer fractions (EFs) for the three HBCD diastereoisomers in the earthworms were different from those in standard samples (p<0.05), indicating that enantiomer selectivity occurred. Moreover, the trends and extent of the enantioselectivity were different between the two species. Additionally, the EFs of α-HBCD that was bioisomerized from β- or γ-isomers were also different from those in the standards (p<0.05), which likely reflect the integration of several processes, such as enantioselective isomerization and the subsequent selective metabolism of the produced α-HBCD or selective excretion of the enantiomers.

  14. Factors Influencing Biogenic Amines Accumulation in Dairy Products

    PubMed Central

    Linares, Daniel M.; del Río, Beatriz; Ladero, Victor; Martínez, Noelia; Fernández, María; Martín, María Cruz; Álvarez, Miguel A.

    2012-01-01

    Fermented foods are among the food products more often complained of having caused episodes of biogenic amines (BA) poisoning. Concerning milk-based fermented foods, cheese is the main product likely to contain potentially harmful levels of BA, specially tyramine, histamine, and putrescine. Prompted by the increasing awareness of the risks related to dietary uptake of high biogenic amine loads, in this review we report all those elaboration and processing technological aspects affecting BA biosynthesis and accumulation in dairy foods. Improved knowledge of the factors involved in the synthesis and accumulation of BA should lead to a reduction in their incidence in milk products. Synthesis of BA is possible only when three conditions converge: (i) availability of the substrate amino acids; (ii) presence of microorganisms with the appropriate catabolic pathway activated; and (iii) environmental conditions favorable to the decarboxylation activity. These conditions depend on several factors such as milk treatment (pasteurization), use of starter cultures, NaCl concentration, time, and temperature of ripening and preservation, pH, temperature, or post-ripening technological processes, which will be discussed in this chapter. PMID:22783233

  15. Accumulator

    NASA Technical Reports Server (NTRS)

    Fenwick, J. R.; Karigan, G. H. (Inventor)

    1977-01-01

    An accumulator particularly adapted for use in controlling the pressure of a stream of fluid in its liquid phase utilizing the fluid in its gaseous phase was designed. The accumulator is characterized by a shell defining a pressure chamber having an entry throat for a liquid and adapted to be connected in contiguous relation with a selected conduit having a stream of fluid flowing through the conduit in its liquid phase. A pressure and volume stabilization tube, including an array of pressure relief perforations is projected into the chamber with the perforations disposed adjacent to the entry throat for accommodating a discharge of the fluid in either gaseous or liquid phases, while a gas inlet and liquid to gas conversion system is provided, the chamber is connected with a source of the fluid for continuously pressuring the chamber for controlling the pressure of the stream of liquid.

  16. Bioaccumulation of PCBs Across Concentration Gradients in Sediments

    EPA Science Inventory

    Sediment bioaccumulation tests with Lumbriculus variegatus quantify the relationships between the chemical residues in sediments and benthic invertebrates, and these relationships are expressed as biota-sediment accumulation factors (BSAF). At some field sites, BSAFs decr...

  17. Watching the Clock Tick: Factors Associated with TANF Accumulation

    ERIC Educational Resources Information Center

    Seefeldt, Kristin S.; Orzol, Sean M.

    2005-01-01

    The 1996 welfare reform made extended welfare stays more difficult. One of the most notable provisions was the 60-month lifetime limit on cash benefits through the Temporary Assistance to Needy Families (TANF) program. This study investigated the personal characteristics associated with accumulating more months on TANF. Using four waves of data…

  18. Association of Lipid Accumulation Product with Cardio-Metabolic Risk Factors in Postmenopausal Women.

    PubMed

    Namazi Shabestari, Alireza; Asadi, Mojgan; Jouyandeh, Zahra; Qorbani, Mostafa; Kelishadi, Roya

    2016-06-01

    The lipid accumulation product is a novel, safe and inexpensive index of central lipid over accumulation based on waist circumference and fasting concentration of circulating triglycerides. This study was designed to investigate the ability of lipid accumulation product to predict Cardio-metabolic risk factors in postmenopausal women. In this Cross-sectional study, 264 postmenopausal women by using convenience sampling method were selected from menopause clinic in Tehran. Cardio-metabolic risk factors were measured, and lipid accumulation product (waist-58×triglycerides [nmol/L]) was calculated. Optimal cut-off point of lipid accumulation product for predicting metabolic syndrome was estimated by ROC (Receiver-operating characteristic) curve analysis. Metabolic syndrome was diagnosed in 41.2% of subjects. Optimal cut-off point of lipid accumulation product for predicting metabolic syndrome was 47.63 (sensitivity:75%; specificity:77.9%). High lipid accumulation product increases risk of all Cardio-metabolic risk factors except overweight, high Total Cholesterol, high Low Density Lipoprotein Cholesterol and high Fasting Blood Sugar in postmenopausal women. Our findings show that lipid accumulation product is associated with metabolic syndrome and some Cardio-metabolic risk factors Also lipid accumulation product may have been a useful tool for predicting cardiovascular disease and metabolic syndrome risk in postmenopausal women.

  19. An investigation on factors influencing dust accumulation on CSP mirrors

    NASA Astrophysics Data System (ADS)

    Pennetta, S.; Yu, S.; Borghesani, P.; Cholette, M.; Barry, John; Guan, Z.

    2016-05-01

    The profitability of a CSP plant is highly affected by the efficiency of the solar field: it is essential to maintain mirrors' reflectivity at high level to avoid thermal power loss. Dust fouling is the main cause of reflectivity loss and cleaning of mirrors is a crucial activity to restore economical level of reflectivity. However, the high cost of cleaning operations requires the study and identification of a balanced plan for the dust removal. The dust generation and transport to the plant site is the first mechanism that needs to be modelled to identify the optimal schedule for cleaning operations and it is highly dependent on weather conditions. Several studies have suggested a dependency of reflectors performance with humidity level, frequency of rainfalls, wind and mirrors' tilting angle, however rarely quantitative correlation studies have been performed to validate these hypotheses. The aim of this research is to provide an in-depth insight on interaction between the main parameters and airborne dust concentration, providing quantitative information for the development of future mirror dusting models. Outcomes evidence the crucial role of high winds responsible of dust concentration in conjunction with higher wind direction frequencies in the range 60-120°. Actually, in this scenario a perfectly monotonic increase of dust accumulation in the air has been observed with high correspondence of wind direction. A very low effect is provided by the ambient temperature as the contribution of the barometric pressure.

  20. Uptake and accumulation of sediment-associated 4-nonylphenol in a benthic invertebrate (Lumbriculus variegatus, freshwater oligochaete).

    PubMed

    Croce, Valeria; De Angelis, Silvia; Patrolecco, Luisa; Polesello, Stefano; Valsecchi, Sara

    2005-05-01

    In the present work, the oligochaete Lumbriculus variegatus was exposed for 56 d to lake sediment spiked with 4-nonylphenol (4-NP), which is a breakdown product of alkylphenol polyethoxylates, an important class of nonionic surfactants. During the exposure period, the content of 4-NP was determined in the oligochaetes, sediment, overlying water, and pore water in order to monitor the distribution of the 4-NP in the compartments of the test system. Concentration of 4-NP in L. variegatus increased linearly over the course of the test, with an uptake rate coefficient of 1.9 x 10(-2) (+/- 0.2 x 10(-2); [g carbon/(g lipid x h)]). No steady state was reached at the end of the exposure period, suggesting that the elimination of 4-NP by the organism was negligible. Ingested sediments played an important role in the accumulation of 4-NP in L. variegatus, which may achieve very high 4-NP body concentrations. The 56-d biota sediment accumulation factor (BSAF) was 24 +/- 7 g carbon/g lipid. L. variegatus also was exposed to 4-NP-contaminated field sediment, and field oligochaetes and sediments were collected for 4-NP pollution assessment in aquatic ecosystem. The 4-NP uptake with natural sediment was in accordance with that measured with spiked sediments, suggesting that the bioavailability of sediment-associated 4-NP for L. variegatus was not affected by 4-NP sediment concentration and abiotic sediment characteristics. The BSAFs measured in field oligochaetes, ranging from 39 to 55 g carbon/g lipid, was relatively higher than the bioaccumulation factor measured in laboratory tests. The results suggest that 4-NP concentration can reach high levels in benthic oligochaetes; this can be an important way of exposure for their pelagic predators.

  1. Abiotic factors influence plant storage lipid accumulation and composition.

    PubMed

    Singer, Stacy D; Zou, Jitao; Weselake, Randall J

    2016-02-01

    The demand for plant-derived oils has increased substantially over the last decade, and is sure to keep growing. While there has been a surge in research efforts to produce plants with improved oil content and quality, in most cases the enhancements have been small. To add further complexity to this situation, substantial differences in seed oil traits among years and field locations have indicated that plant lipid biosynthesis is also influenced to a large extent by multiple environmental factors such as temperature, drought, light availability and soil nutrients. On the molecular and biochemical levels, the expression and/or activities of fatty acid desaturases, as well as diacylglycerol acyltransferase 1, have been found to be affected by abiotic factors, suggesting that they play a role in the lipid content and compositional changes seen under abiotic stress conditions. Unfortunately, while only a very small number of strategies have been developed as of yet to minimize these environmental effects on the production of storage lipids, it is clear that this feat will be of the utmost importance for developing superior oil crops with the capability to perform in a consistent manner in field conditions in the future.

  2. Removal mechanisms and plant species selection by bioaccumulative factors in surface flow constructed wetlands (CWs): In the case of triclosan.

    PubMed

    Zhao, Congcong; Xie, HuiJun; Xu, Jingtao; Zhang, Jian; Liang, Shuang; Hao, Jingcheng; Ngo, Huu Hao; Guo, Wenshan; Xu, Xiaoli; Wang, Qian; Wang, Jingmin

    2016-03-15

    Plants can bioaccumulate triclosan and bond with microbes and sediments in constructed wetlands (CWs) as well. However, little is known regarding the species-specific removal mechanism of CWs components and the selection of suitable wetland plant species for triclosan disposal. In this work, the use of bioaccumulation factors (BAFs) and biota to sediment accumulation factors (BSAFs) for choosing the best triclosan removal plant species was studied in laboratory-scale CWs. By the end of the experiment, over 80% of triclosan was removed and a specie-effect distribution was revealed in CWs with emergent, submerged and floating plants. By mass balance calculation, negative correlation between triclosan concentration in plants and degradation process was observed. The significant correlations between Log BSAFs values and triclosan concentration in plants or degradation contribution made it possible and reasonable in wetland plants selection. Introductions on plant species were provided considering the target removal process or regulation method. This work provided new information on plant species selection in CWs for triclosan removal or its emergency remediation by using bioaccumulative factors.

  3. Identification of betacyanin and effects of environmental factors on its accumulation in halophyte Suaeda salsa.

    PubMed

    Wang, Chang-Quan; Zhao, Ji-Qiang; Chen, Min; Wang, Bao-Shan

    2006-04-01

    Effects of temperature, light, salinity and developmental phases on the accumulation of red pigments in the C(3) halophyte Suaeda salsa were studied, and the physical and chemical characteristics of the red pigments were also analyzed. The results indicate that: these red pigments are insoluble in organic solvents but free in water, the pigments are red-violet and stable under acidic condition while yellow and unstable under alkaline condition, and they absorb the highest value at wavelength near 538 nm, light suppresses their accumulation and enhances their decomposition. These results suggest that these red pigments are betacyanins. Darkness, low temperatures and high salinity enhance betacyanin accumulation in Suaeda salsa, and darkness in the germination phase is one of the most important environmental factors for the betacyanin accumulation.

  4. KABAM Version 1.0 User's Guide and Technical Documentation - Appendix F -Description of Equations Used to Calculate the BCF, BAF, BMF, and BSAF Values

    EPA Pesticide Factsheets

    Describes equations for bioconcentration, bioaccumulation, biomagnification and biota-sediment accumulation factors used in KABAM V1.0. KABAM is a simulation model used to predict pesticide concentrations in aquatic regions for use in exposure assessments.

  5. [Mathematic concept model of accumulation of functional disorders associated with environmental factors].

    PubMed

    Zaĭtseva, N V; Trusov, P V; Kir'ianov, D A

    2012-01-01

    The mathematic concept model presented describes accumulation of functional disorders associated with environmental factors, plays predictive role and is designed for assessments of possible effects caused by heterogenous factors with variable exposures. Considering exposure changes with self-restoration process opens prospects of using the model to evaluate, analyse and manage occupational risks. To develop current theoretic approaches, the authors suggested a model considering age-related body peculiarities, systemic interactions of organs, including neuro-humoral regulation, accumulation of functional disorders due to external factors, rehabilitation of functions during treatment. General objective setting covers defining over a hundred unknow coefficients that characterize speed of various processes within the body. To solve this problem, the authors used iteration approach, successive identification, that starts from the certain primary approximation of the model parameters and processes subsequent updating on the basis of new theoretic and empirical knowledge.

  6. Hypoxia Promotes Glycogen Accumulation through Hypoxia Inducible Factor (HIF)-Mediated Induction of Glycogen Synthase 1

    PubMed Central

    Pescador, Nuria; Garcia-Rocha, Mar; Ortiz-Barahona, Amaya; Vazquez, Silvia; Ordoñez, Angel; Cuevas, Yolanda; Saez-Morales, David; Garcia-Bermejo, Maria Laura; Landazuri, Manuel O.; Guinovart, Joan; del Peso, Luis

    2010-01-01

    When oxygen becomes limiting, cells reduce mitochondrial respiration and increase ATP production through anaerobic fermentation of glucose. The Hypoxia Inducible Factors (HIFs) play a key role in this metabolic shift by regulating the transcription of key enzymes of glucose metabolism. Here we show that oxygen regulates the expression of the muscle glycogen synthase (GYS1). Hypoxic GYS1 induction requires HIF activity and a Hypoxia Response Element within its promoter. GYS1 gene induction correlated with a significant increase in glycogen synthase activity and glycogen accumulation in cells exposed to hypoxia. Significantly, knockdown of either HIF1α or GYS1 attenuated hypoxia-induced glycogen accumulation, while GYS1 overexpression was sufficient to mimic this effect. Altogether, these results indicate that GYS1 regulation by HIF plays a central role in the hypoxic accumulation of glycogen. Importantly, we found that hypoxia also upregulates the expression of UTP:glucose-1-phosphate urydylyltransferase (UGP2) and 1,4-α glucan branching enzyme (GBE1), two enzymes involved in the biosynthesis of glycogen. Therefore, hypoxia regulates almost all the enzymes involved in glycogen metabolism in a coordinated fashion, leading to its accumulation. Finally, we demonstrated that abrogation of glycogen synthesis, by knock-down of GYS1 expression, impairs hypoxic preconditioning, suggesting a physiological role for the glycogen accumulated during chronic hypoxia. In summary, our results uncover a novel effect of hypoxia on glucose metabolism, further supporting the central importance of metabolic reprogramming in the cellular adaptation to hypoxia. PMID:20300197

  7. Methane dynamics in a montane fen: Factors controlling production, accumulation and emissions

    NASA Astrophysics Data System (ADS)

    Mwakanyamale, K. E.; Yeung, H.; Strack, M.

    2014-12-01

    Characterization of methane dynamics in peatlands is essential to improve understanding of peatlands contribution to carbon balance and interaction with climate. Of the two peatland types, natural fens are known to be a larger contributor of methane emissions to the atmosphere than natural bogs. This study uses geophysical methods integrated with in-situ direct measurements and chamber fluxes to improve understanding of temporal and spatial variation in methane production, accumulation and emissions from natural montane fen in Alberta Canada. Meteorological data and peat cores (~150 cm) were collected to study factors affecting methane production, accumulation and emissions from the Sibbald Research Wetland, a montane fen in the Rocky Mountains in southern Alberta. Our results show a direct correlation between methane accumulation and degree of peat humification, substrate quality and porosity. Changes in temperature, pressure and water table position were shown to relate to ebullition events, with the highest number of ebullition events occurring from late August to early November. The geophysical results indicate a small spatial variation in free phase biogenic gas accumulation within the studied area. Diffusive methane fluxes were correlated to plant productivity on both daily and seasonal time scales with patterns varying between plots dominated by Juncus sp. and Carex spp. These results highlight the interacting ecological and physical controls on peatland methane dynamics.

  8. Targeted intracellular accumulation of macrophage migration inhibitory factor in the reperfused heart mediates cardioprotection.

    PubMed

    Pohl, Julia; Hendgen-Cotta, Ulrike B; Rammos, Christos; Luedike, Peter; Mull, Elena; Stoppe, Christian; Jülicher, Karen; Lue, Hongqi; Merx, Marc W; Kelm, Malte; Bernhagen, Jürgen; Rassaf, Tienush

    2016-01-01

    S-nitrosation of macrophage migration inhibitory factor (MIF) has been shown to be cytoprotective in myocardial ischaemia/reperfusion (I/R) injury. Since the exact mechanism of action is unknown, we here characterise the cardioprotective effects of targeted intracellular accumulation of MIF in myocardial I/R injury. We used different in vivo, ex vivo and in vitro models of myocardial I/R and hypoxia/reoxygenation (H/R) injury to determine MIF levels by immunoblots and ELISA in different phases of reperfusion and reoxygenation, respectively. We discovered a rapid decrease of cardiac MIF that was specific to the early phase of reperfusion. Posttranslational modification of MIF via S-nitrosation--proofed by a modified version of the Biotin Switch Assay--prevented this rapid decrease, leading to a targeted intracellular accumulation of MIF in the early phase of reperfusion. Intracellular MIF accumulation preserved the intracellular ability of MIF to reduce oxidative stress as shown by hydrogen peroxide and aconitase activity measurements. Infarct size measurements by TTC staining showed an overall enhanced cardioprotective effect of this protein by reduction of reperfusion injury. In summary, we have unravelled a novel mechanism of MIF-mediated cardioprotection. Targeted intracellular accumulation of MIF by S-nitrosation may offer a novel therapeutic approach in the treatment of myocardial I/R-injury.

  9. Factors affecting polyhydroxybutyrate accumulation in mesophyll cells of sugarcane and switchgrass

    PubMed Central

    2014-01-01

    Background Polyhydroxyalkanoates are linear biodegradable polyesters produced by bacteria as a carbon store and used to produce a range of bioplastics. Widespread polyhydroxyalkanoate production in C4 crops would decrease petroleum dependency by producing a renewable supply of biodegradable plastics along with residual biomass that could be converted into biofuels or energy. Increasing yields to commercial levels in biomass crops however remains a challenge. Previously, lower accumulation levels of the short side chain polyhydroxyalkanoate, polyhydroxybutyrate (PHB), were observed in the chloroplasts of mesophyll (M) cells compared to bundle sheath (BS) cells in transgenic maize (Zea mays), sugarcane (Saccharum sp.), and switchgrass (Panicum virgatum L.) leading to a significant decrease in the theoretical yield potential. Here we explore various factors which might affect polymer accumulation in mesophyll cells, including targeting of the PHB pathway enzymes to the mesophyll plastid and their access to substrate. Results The small subunit of Rubisco from pea effectively targeted the PHB biosynthesis enzymes to both M and BS chloroplasts of sugarcane and switchgrass. PHB enzyme activity was retained following targeting to M plastids and was equivalent to that found in the BS plastids. Leaf total fatty acid content was not affected by PHB production. However, when fatty acid synthesis was chemically inhibited, polymer accumulated in M cells. Conclusions In this study, we provide evidence that access to substrate and neither poor targeting nor insufficient activity of the PHB biosynthetic enzymes may be the limiting factor for polymer production in mesophyll chloroplasts of C4 plants. PMID:25209261

  10. Influence of the Environmental Factors on the Accumulation of the Bioactive Ingredients in Chinese Rhubarb Products

    PubMed Central

    Hu, Huijuan; Li, Yanpeng; Liu, Chunsheng; Wei, Shengli

    2016-01-01

    To provide a basis for controlling the quality of rhubarb under artificial cultivation, the present work was designed to evaluate the contents of 14 active pharmaceutical ingredients (API) of rhubarb in major rhubarb production areas in China and analyze the correlations between the contents of API and such factors as species, geographic distribution and soil. The levels of fourteen API in rhubarb were measured using HPLC. The geographic distributions were collected using GPS and the nutrients in the soil were measured using the methods in the literature. The results showed that the levels of major API vary significantly among plants of different locations according to variance analysis. The species factor has few obvious effect on the overall properties of the rhubarb by the cluster analysis because of the two source species occurring in all divided three groups. However, Rheum tanguticum Maxim.ex Balf. is less effective at synthesizing and accumulating 9 API out of 14 than Rheum palmatum L. The correlation analysis and regression analysis also indicated that a lower latitude should be considered in the accumulation of API and a lower longitude should be considered to produce more compound anthraquinones. Lower levels of total P, rapidly available P and available molybdenum (Mo) and higher available K and available Zn in the soil were significantly correlated to accumulation of API in rhubarb. These results provide a basis for the clinical application and controlling the levels of the major API of rhubarb during artificial cultivation. PMID:27138597

  11. Which Factors Determine Metal Accumulation in Agricultural Soils in the Severely Human-Coupled Ecosystem?

    PubMed Central

    Xu, Li; Cao, Shanshan; Wang, Jihua; Lu, Anxiang

    2016-01-01

    Agricultural soil is typically an important component of urban ecosystems, contributing directly or indirectly to the general quality of human life. To understand which factors influence metal accumulation in agricultural soils in urban ecosystems is becoming increasingly important. Land use, soil type and urbanization indicators all account for considerable differences in metal accumulation in agricultural soils, and the interactions between these factors on metal concentrations were also examined. Results showed that Zn, Cu, and Cd concentrations varied significantly among different land use types. Concentrations of all metals, except for Cd, were higher in calcareous cinnamon soil than in fluvo-aquic soil. Expansion distance and road density were adopted as urbanization indicators, and distance from the urban center was significantly negatively correlated with concentrations of Hg, and negatively correlated with concentrations of Zn, and road density was positively correlated with Cd concentrations. Multivariate analysis of variance indicated that Hg concentration was significantly influenced by the four-way interaction among all factors. The results in this study provide basic data to support the management of agricultural soils and to help policy makers to plan ahead in Beijing. PMID:27196922

  12. Edaphic factors affecting the toxicity and accumulation of arsenate in the earthworm Lumbricus terrestris

    SciTech Connect

    Meharg, A.A.; Shore, R.F.; Broadgate, K.

    1998-06-01

    The toxicity and accumulation of arsenate was determined in the earthworm Lumbricus terrestris in soil from different layers of a forest profile. Toxicity increased fourfold between 2 and 10 d. Edaphic factors (pH, soil organic matter, and depth in soil profile) also affected toxicity with a three fold decrease in the concentration that causes 50% mortality with increasing depth in soil. In a 4-d exposure study, there was no evidence of arsenic bioconcentration in earthworm tissue, although bioaccumulation was occurring. There was a considerable difference in tissue residues between living and dead earthworms, with dead worms having higher concentrations. This difference was dependent on both soil arsenate concentration and on soil type. Over a wide range of soil arsenate concentrations, earthworm arsenic residues are homeostatically maintained in living worms, but this homeostasis breaks down during death. Alternatively, equilibration with soil residues may occur via accumulation after death. In long-term accumulation studies in soils dosed with a sublethal arsenate concentration, bioconcentration of arsenate did not occur until day 12, after which earthworm concentrations rose steadily above the soil concentration, with residues in worms three fold higher than soil concentrations by the termination of the study. This bioconcentration only occurred in depurated worms over the time period of the study. Initially, depurated worms had lower arsenic concentrations than undepurated until tissue concentrations were equivalent to the soil concentration. Once tissue concentration was greater than soil concentration, depurated worms had higher arsenic residues than undepurated.

  13. Isorhamnetin Inhibits Reactive Oxygen Species-Dependent Hypoxia Inducible Factor (HIF)-1α Accumulation.

    PubMed

    Seo, Suho; Seo, Kyuhwa; Ki, Sung Hwan; Shin, Sang Mi

    2016-01-01

    Isorhamnetin is a flavonoid metabolite of quercetin and isolated from water dropwort (Oenanthe javanica, Umbelliferae). It has been reported that isorhamnetin exerts beneficial effects including antioxidant, anti-inflammatory, and anti-proliferative activities. The present study investigated whether the antioxidant activity of isorhamnetin is correlated with its anti-cancer effects on colorectal cancer cells. Isorhamnetin significantly repressed cobalt chloride (CoCl2)- or hypoxia-induced hypoxia inducible factor-1α (HIF-1α) accumulation in HCT116 and HT29 cells. When compared with quercetin, isorhamnetin showed potent inhibition of HIF-1α. Moreover, it inhibited CoCl2-induced activity of hypoxia response element reporter gene and HIF-1α-dependent transcription of genes such as glucose transporter 1, lactate dehydrogenase A, carbonic anhydrase-IX, and pyruvate dehydrogenase kinase 1. Isorhamnetin also blocked hydrogen peroxide (H2O2)-induced HIF-1α accumulation. The antioxidant effects of isorhamnetin were confirmed by observation of CoCl2- or H2O2-induced reactive oxygen species (ROS) production. Consistently, overexpressed HIF-1α was decreased by isorhamnetin or N-acetyl-L-cysteine in HEK293 cells. In vitro migration and invasion assay further confirmed the inhibitory effects of isorhamnetin on cancer cells. Collectively, these results demonstrate that isorhamnetin inhibits ROS-mediated HIF-1α accumulation, which contributes to its anti-metastatic efficacy.

  14. Distribution and accumulation of polycyclic aromatic hydrocarbons (PAHs) in the food web of Nansi Lake, China.

    PubMed

    Zhang, Guizhai; Pan, Zhaoke; Wang, Xiaoming; Mo, Xiaojie; Li, Xiaoming

    2015-04-01

    The concentrations of polycyclic aromatic hydrocarbons (PAHs) were analyzed in water, sediment, and biota (aquatic plant, shrimp, and fish) of Nansi Lake by gas chromatography-mass spectrometry (GC-MS). The concentrations of total PAHs were 27.54-55.04 ng L(-1) in water, 80.31-639.23 ng g(-1) dry weight (dw) in sediments, 20.92-192.78 ng g(-1) dw in aquatic plants, and 67.3-533.9 ng g(-1) dw in fish and shrimp muscles. The ratios of phenanthrene to anthracene (Ph/An), fluoranthene to pyrene (Flu/Pyr), and low molecular weight to high molecular weight (LMW/HMW) in sediment indicated that the sources of the PAHs were a mixture of pyrolytic and petrogenic contamination at most sampling sites in Nansi Lake. The composition profile of PAHs in plants was similar to that in water and animals with 2-3 ring PAHs being dominant. The 4-6 ring PAHs were the dominant PAH compounds in sediment. There is a positive correlation between sediment and aquatic plants, but their PAH composition profiles were different, implying that aquatic plant absorption of PAHs from sediment is selective and the accumulation of PAHs in aquatic plants is different. The concentration of PAHs in fish showed a positive correlation with plants, reflecting that the PAHs in fish are mainly absorbed from aquatic plants rather than directly from the water. Bioaccumulation of LMW PAHs in aquatic biota was higher than HMW PAHs. The biota-sediment accumulation factor (BSAF) values of total PAHs in the plants Potamogeton lucens Linn and Ceratophyllum demersum Linn were higher than that in most animals. The BSAF values of total PAHs in animals were in the following order: Cyprinus carpio>Macrobrachium nipponense>Carassius auratus>Channa argus. There was no significant relationship between PAH bioaccumulation and trophic levels in Nansi Lake. Risk assessment of PAHs in water, sediment, and animals indicated that the water environment of Nansi Lake is safe at present. It is worthwhile to note that benzo [a

  15. Factors associated with visceral fat accumulation in the general population in Okinawa, Japan

    PubMed Central

    Arakaki, Shingo; Maeshiro, Tatsuji; Hokama, Akira; Hoshino, Kunikazu; Maruwaka, Shuichi; Higashiarakawa, Miwa; Parrott, Gretchen; Hirata, Tetsuo; Kinjo, Kozen; Fujita, Jiro

    2016-01-01

    AIM: To investigate the clinical and biochemical factors associated with visceral fat accumulation in the general population. METHODS: We enrolled 1004 subjects who underwent a medical health checkup between April 2008 and March 2009. The medical health checkup included the following tests: Height, body weight, waist circumference (WC), systolic blood pressure, diastolic blood pressure, urinalysis, blood-cell counts, blood chemistry, electrocardiography, chest radiography, and abdominal computed tomography (CT) for visceral fat accumulation. The patients’ medical history and lifestyle factors were collected privately by nurses using a self-administered questionnaire, and they included questions regarding physical activity, sleep duration, dietary habits, smoking, and alcohol consumption. Visceral fat area (VFA) was defined as the sum of the intraperitoneal fat area at the level of the umbilicus with CT density in the range of -150 to -50 Hounsfield units. RESULTS: The mean age and body mass index (BMI) of the study subjects were 57.0 years and 24.4 kg/m2. In both male and females, VFA was significantly and positively correlated with WC (r = 0.532, P < 0.01; r = 0.612, P < 0.01). Subjects with high levels of VFA were primarily male with significantly higher age, height, body weight, BMI, systolic blood pressure (BP), diastolic BP, and hemoglobin in all subjects (P < 0.05). A multivariate logistic regression analysis revealed that VFA had a positive relationship with age ≥ 56, BMI ≥ 25 kg/m2, and triglyceride level ≥ 149 in males (P < 0.05), whereas it had a positive relationship with age ≥ 58, BMI ≥ 24.4 kg/m2, high-density lipoprotein cholesterol level < 40 mg/dL, and current drinking in females (P < 0.05). CONCLUSION: These results suggest that gender differences exist in the clinical and biochemical parameters associated with visceral fat accumulation. PMID:27158542

  16. Supply of fatty acid is one limiting factor in the accumulation of triacylglycerol in developing embryos

    SciTech Connect

    Bao, X.; Ohlrogge, J.

    1999-08-01

    The metabolic factors that determine oil yield in seeds are still not well understood. To begin to examine the limits on triacylglycerol (TAG) production, developing Cuphea lanceolata, Ulmus carpinifolia, and Ulmus parvifolia embryos were incubated with factors whose availability might limit oil accumulation. The addition of glycerol or sucrose did not significantly influence the rate of TAG synthesis. However, the rate of {sup 14}C-TAG synthesis upon addition of 2.1 mM {sup 14}C-decanoic acid (10:0) was approximately four times higher than the in vivo rate of TAG accumulation in C. lanceolata and two times higher than the in vivo rate in U. carpinifolia and U. parvifolia. In C. lanceolata embryos, the highest rate of {sup 14}C-TAG synthesis (14.3 nmol h{sup {minus}1} embryo {sup {minus}1}) was achieved with the addition of 3.6 mM decanoic acid. {sup 14}C-Decanoic acid was incorporated equally well in all three acyl positions of TAG. The results suggest that C. lancelata, U. Carpinifolia, and U. parvifolia embryos have sufficient acyltransferase activities and glycerol-3-phosphate levels to support rates of TAG synthesis in excess of those found in vivo. Consequently, the amount of TAG synthesized in these oilseeds may be in part determined by the amount of fatty acid produced in plastids.

  17. Factors Affecting the Accumulation of Curcumin in Microrhizomes of Curcuma aromatica Salisb

    PubMed Central

    Zhang, Xiaoxia; Sun, Shulan; Wang, Xiaojing

    2015-01-01

    Curcuminoids, and mainly curcumin, are potential therapeutic agents for the prevention of various diseases; however, little is known about the factors that influence their accumulation in Curcuma species. In this study, the effects of factors such as sucrose concentration, different ratios of 6-benzylaminopurine (6-BA) and α-naphthalene acetic acid (NAA), and light quality on the accumulation of curcumin and other curcuminoids in Curcuma aromatica were investigated. Microrhizomes grown on media containing 3% sucrose produced more curcumin and other curcuminoids than those grown on higher concentrations. Moreover, when compared to other ratios of 6-BA and NAA, microrhizomes induced on 3% sucrose media supplemented with 3.0 mg/L 6-BA and 0.5 mg/L NAA produced more curcumin and other curcuminoids; however, the amount was less than in microrhizomes grown on 3% sucrose alone. We determined that a 5% sucrose medium supplemented with 3.0 mg/L of 6-BA and 0.5 mg/L of NAA enhanced the levels of curcumin and curcuminoids and that exposure to red light further increased production. PMID:25722985

  18. Factors affecting the accumulation of curcumin in microrhizomes of Curcuma aromatica Salisb.

    PubMed

    Wu, Ke; Zhang, Xiaoxia; Sun, Shulan; Wang, Xiaojing

    2015-01-01

    Curcuminoids, and mainly curcumin, are potential therapeutic agents for the prevention of various diseases; however, little is known about the factors that influence their accumulation in Curcuma species. In this study, the effects of factors such as sucrose concentration, different ratios of 6-benzylaminopurine (6-BA) and α-naphthalene acetic acid (NAA), and light quality on the accumulation of curcumin and other curcuminoids in Curcuma aromatica were investigated. Microrhizomes grown on media containing 3% sucrose produced more curcumin and other curcuminoids than those grown on higher concentrations. Moreover, when compared to other ratios of 6-BA and NAA, microrhizomes induced on 3% sucrose media supplemented with 3.0 mg/L 6-BA and 0.5 mg/L NAA produced more curcumin and other curcuminoids; however, the amount was less than in microrhizomes grown on 3% sucrose alone. We determined that a 5% sucrose medium supplemented with 3.0 mg/L of 6-BA and 0.5 mg/L of NAA enhanced the levels of curcumin and curcuminoids and that exposure to red light further increased production.

  19. Intra-abdominal fat accumulation is a hypertension risk factor in young adulthood

    PubMed Central

    Takeoka, Atsushi; Tayama, Jun; Yamasaki, Hironori; Kobayashi, Masakazu; Ogawa, Sayaka; Saigo, Tatsuo; Kawano, Hiroaki; Abiru, Norio; Hayashida, Masaki; Maeda, Takahiro; Shirabe, Susumu

    2016-01-01

    Abstract Accumulation of intra-abdominal fat is related to hypertension. Despite this, a relationship between hypertension and intra-abdominal fat in young adulthood is not clear. In this study, we verify whether intra-abdominal fat accumulation increases a hypertension risk in young adult subjects. In a cross-sectional study, intra-abdominal fat area was measured using a dual bioelectrical impedance analysis instrument in 697 university students (20.3 ± 0.7 years, 425 men). Blood pressure and anthropometric factors were measured. Lifestyle variables including smoking, drinking, physical activity, and eating behavior were assessed with questionnaire. High blood pressure risk (systolic blood pressure ≥130 mm Hg and/or diastolic blood pressure ≥85 mm Hg) with increasing intra-abdominal fat area was evaluated. Participants were divided into 5 groups according to their intra-abdominal fat area (≤24.9, 25–49.9, 50–74.9, 75–99.9, and ≥100 cm2). As compared with the values of the smallest intra-abdominal fat area group, the crude and lifestyle-adjusted odds ratios (ORs) were elevated in larger intra-abdominal fat area groups [OR 1.31, 95% confidence interval (CI) 0.66–2.80; OR 3.38, 95% CI 1.60–7.57; OR 7.71, 95% CI 2.75–22.22; OR 18.74, 95% CI 3.93–105.64, respectively). The risk increase was observed only in men. Intra-abdominal fat accumulation is related to high blood pressure in men around 20 years of age. These results indicate the importance of evaluation and reduction of intra-abdominal fat to prevent hypertension. PMID:27828861

  20. Factors controlling mud accumulation in the Heuksan mud belt off southwestern Korea

    NASA Astrophysics Data System (ADS)

    Chang, Tae Soo; Ha, Hun Jun; Chun, Seung Soo

    2015-12-01

    The Heuksan mud belt (hereafter HMB) is 20~50 km wide, ~200 km long, and ~50 m thick, having accumulated in the course of the Holocene transgression on the tide-dominated epicontinental shelf southwest of Korea. The internal architecture of the HMB is characterized by offshore prograding clinoforms. Of particular interest are the depositional processes responsible for this anomalously thick mud accumulation within a relatively short period of time. Tidal currents are important in the dispersal of mud in the HMB, although these alone cannot explain such an enormous mud deposit. In order to understand the formative processes of the HMB, a detailed sedimentary facies analysis, including high-resolution grain-size measurements, has been conducted on more than 30 short cores and three long drill cores recovered from the mud belt. Five major mud facies were identified. Of these, mud sequences showing a thickening-thinning trend of alternating silt and clay laminae suggestive of a tidal origin occur dominantly at inner to mid shelf locations. By contrast, internally structureless muds with sharp bases and no bioturbation, which are interpreted of representing fluid-mud deposits, are widespread at mid to outer shelf locations. Wave-generated mud ripples and storm beds on the inner shelf suggest that storm waves in winter resuspend previously deposited mud to form near-bed fluid-mud suspensions with resulting gravity-driven mud transport across the low-gradient outer shelf. This previously not recognized process is probably a major factor controlling depositional processes on the giant mud belt, enabling rapid accumulation and offshore progradation even during transgression, i.e., at times of sea-level rise.

  1. Factors of the accumulation of heavy metals and metalloids at geochemical barriers in urban soils

    NASA Astrophysics Data System (ADS)

    Kosheleva, N. E.; Kasimov, N. S.; Vlasov, D. V.

    2015-05-01

    The bulk contents and concentrations of mobile (extracted by an ammonium acetate buffer with EDTA) Cd, Pb, Sb, As, Bi, Zn, and Cu were determined in the surface horizons of urban soils in the Eastern administrative okrug of Moscow. The regression analysis showed that the accumulation of these metals and metalloids in the soils is controlled by the physicochemical soil properties and by number of anthropogenic factors and landscape conditions (geochemical position, type of loose deposits, character of land use, dust load, vehicle emissions, building pattern, percent of green areas, and the extent of sealed soils). The precipitation of studied elements on the geochemical barriers had the following regularities: Cd, Cu, and Zn accumulated on the alkaline barriers; Bi, Sb, As, Cu, Pb, and Zn, on chemisorption barriers; Sb, As, and Pb, on organomineral barriers; and Cd and Cu, on the sorption-sedimentation barriers. Technogenic transformation of the physicochemical properties of urban soils resulted in the increase of the mean bulk contents of heavy metals and metalloids by 33-99%; the portion of elements fixed on the geochemical barriers increased by 26-50%.

  2. Phenylpropanoids Accumulation in Eggplant Fruit: Characterization of Biosynthetic Genes and Regulation by a MYB Transcription Factor

    PubMed Central

    Docimo, Teresa; Francese, Gianluca; Ruggiero, Alessandra; Batelli, Giorgia; De Palma, Monica; Bassolino, Laura; Toppino, Laura; Rotino, Giuseppe L.; Mennella, Giuseppe; Tucci, Marina

    2016-01-01

    Phenylpropanoids are major secondary metabolites in eggplant (Solanum melongena) fruits. Chlorogenic acid (CGA) accounts for 70–90% of total phenolics in flesh tissues, while anthocyanins are mainly present in the fruit skin. As a contribution to the understanding of the peculiar accumulation of these health-promoting metabolites in eggplant, we report on metabolite abundance, regulation of CGA and anthocyanin biosynthesis, and characterization of candidate CGA biosynthetic genes in S. melongena. Higher contents of CGA, Delphinidin 3-rutinoside, and rutin were found in eggplant fruits compared to other tissues, associated to an elevated transcript abundance of structural genes such as PAL, HQT, DFR, and ANS, suggesting that active in situ biosynthesis contributes to anthocyanin and CGA accumulation in fruit tissues. Putative orthologs of the two CGA biosynthetic genes PAL and HQT, as well as a variant of a MYB1 transcription factor showing identity with group six MYBs, were isolated from an Occidental S. melongena traditional variety and demonstrated to differ from published sequences from Asiatic varieties. In silico analysis of the isolated SmPAL1, SmHQT1, SmANS, and SmMyb1 promoters revealed the presence of several Myb regulatory elements for the biosynthetic genes and unique elements for the TF, suggesting its involvement in other physiological roles beside phenylpropanoid biosynthesis regulation. Transient overexpression in Nicotiana benthamiana leaves of SmMyb1 and of a C-terminal SmMyb1 truncated form (SmMyb1Δ9) resulted in anthocyanin accumulation only of SmMyb1 agro-infiltrated leaves. A yeast two-hybrid assay confirmed the interaction of both SmMyb1 and SmMyb1Δ9 with an anthocyanin-related potato bHLH1 TF. Interestingly, a doubled amount of CGA was detected in both SmMyb1 and SmMyb1Δ9 agro-infiltrated leaves, thus suggesting that the N-terminal region of SmMyb1 is sufficient to activate its synthesis. These data suggest that a deletion of the C

  3. Biomass accumulation in sugarcane: unravelling the factors underpinning reduced growth phenomena.

    PubMed

    van Heerden, Philippus D R; Donaldson, Robin A; Watt, Derek A; Singels, Abraham

    2010-06-01

    Constant radiation use efficiency throughout the entire sugarcane crop cycle is often assumed for crop yield forecasting and management purposes. However, several examples are known where the linear relationship between cumulative intercepted radiation and biomass accumulation becomes uncoupled at some stage, with the latter declining by 21% in one reported case. This slowdown in growth is commonly referred to as the reduced growth phenomenon (RGP). In certain instances, this phenomenon appears to be related to the timing of crop initiation and harvesting. Summer-initiated sugarcane crops do not always resume expected growth rates after the transition from winter to spring, despite conditions being favourable for vigorous growth. Possible factors underlying the failure of sugarcane crops to realize full yield potential are reported and interrogated in this review. The potential involvement of lodging, flowering, and tiller mortality have been reviewed and the data suggest that, while such factors may contribute, they are unlikely to be the major causes of sugarcane RGPs. Similarly, reports indicate that temperature cannot account for reduced growth, as rates remain low despite the onset of favourable conditions in spring. In contrast, a decline in specific leaf nitrogen, potential initiation of sugar-mediated source-sink feedback inhibition of photosynthesis, and increased rates of maintenance respiration that occur during sugarcane development and maturation appear to be likely factors contributing to RGPs. An evaluation of areas of sugarcane biology and agronomy that would benefit from further research towards overcoming yield restriction imposed by reduced growth phenomena is provided.

  4. Stress-induced Nuclear Bodies Are Sites of Accumulation of Pre-mRNA Processing Factors

    PubMed Central

    Denegri, Marco; Chiodi, Ilaria; Corioni, Margherita; Cobianchi, Fabio; Riva, Silvano; Biamonti, Giuseppe

    2001-01-01

    Heterogeneous nuclear ribonucleoprotein (hnRNP) HAP (hnRNP A1 interacting protein) is a multifunctional protein with roles in RNA metabolism, transcription, and nuclear structure. After stress treatments, HAP is recruited to a small number of nuclear bodies, usually adjacent to the nucleoli, which consist of clusters of perichromatin granules and are depots of transcripts synthesized before stress. In this article we show that HAP bodies are sites of accumulation for a subset of RNA processing factors and are related to Sam68 nuclear bodies (SNBs) detectable in unstressed cells. Indeed, HAP and Sam68 are both present in SNBs and in HAP bodies, that we rename “stress-induced SNBs.” The determinants required for the redistribution of HAP lie between residue 580 and 788. Different portions of this region direct the recruitment of the green fluorescent protein to stress-induced SNBs, suggesting an interaction of HAP with different components of the bodies. With the use of the 580–725 region as bait in a two-hybrid screening, we have selected SRp30c and 9G8, two members of the SR family of splicing factors. Splicing factors are differentially affected by heat shock: SRp30c and SF2/ASF are efficiently recruited to stress-induced SNBs, whereas the distribution of SC35 is not perturbed. We propose that the differential sequestration of splicing factors could affect processing of specific transcripts. Accordingly, the formation of stress-induced SNBs is accompanied by a change in the splicing pattern of the adenovirus E1A transcripts. PMID:11694584

  5. Accumulation of background levels of persistent organochlorine and organobromine pollutants through the soil-earthworm-hedgehog food chain.

    PubMed

    Vermeulen, Frouke; Covaci, Adrian; D'Havé, Helga; Van den Brink, Nico W; Blust, Ronny; De Coen, Wim; Bervoets, Lieven

    2010-10-01

    The bioaccumulation of persistent organic pollutants (POPs), such as polychlorinated biphenyls (PCBs), polybrominated diphenyl ethers (PBDEs) and DDT and metabolites, was investigated in the soil-earthworm-hedgehog food chain. Concentrations of selected POPs were measured in soil and earthworms collected in grassland and open woodland and in hair and blood of hedgehogs foraging in two parks containing these habitats. Despite background concentrations in soil (ranging from 1.3 to 9.3 ng/g for DDTs, 2.3 to 6.5 ng/g for PCBs and 0.08 to 0.20 ng/g for PBDEs), biota-soil accumulation factors (BSAFs) indicated that earthworms accumulated POPs (0.48-1.70 for DDTs, 1.09-2.76 for PCBs and 1.99-5.67 for PBDEs) and that animals feeding on earthworms are potentially exposed to higher concentrations of pollutants. BSAFs decreased with increasing soil concentrations for the three groups of compounds, suggesting that steady-state equilibrium was not reached in soil or earthworms. Positive, but low, log-linear relationships were found for DDT (r(2)=0.23, p<0.05 for Brasschaat and r(2)=0.63, p<0.01 for Hoboken) and PCB (r(2)=0.13, p<0.05 for both parks) concentrations between soil and earthworms. In order to relate earthworm to hedgehog POP concentrations, the foraging behavior of each individual was taken into account. The use of hair as a potential biomonitoring tissue in exposure and risk assessment of POPs was evaluated by examining the relationship between PCB and p,p'-DDE levels in hedgehogs' hair and blood. Contaminant profiles were used to gain insight into biotransformation of the studied compounds in each step of the investigated food chain and in the blood of hedgehogs, as well as the consequences thereof for their incorporation in hair. The absence of a discernable relationship between POP concentrations in earthworms and hair is possible due to variation in individual foraging behavior and POP uptake. Our results suggest that POPs in tissues should be measured from an

  6. Factors controlling accumulation of soil organic carbon along vegetation succession in a typical karst region in Southwest China.

    PubMed

    Liu, Shujuan; Zhang, Wei; Wang, Kelin; Pan, Fujing; Yang, Shan; Shu, Shiyan

    2015-07-15

    Vegetation succession enhances the accumulation of carbon in the soil. However, little is known about the mechanisms underlying soil organic carbon (SOC) accumulation in different vegetation types in the karst region of Southwest China. The goal of this study was to identify and prioritize the effects of environmental parameters, including soil physico-chemical properties, microbial biomass, enzyme activities, and litter characteristics, on SOC accumulation along a vegetation succession sere (grassland, shrubland, secondary forest, and primary forest) in the karst landscape of Southwest China. Relationships between these parameters and SOC were evaluated by redundancy analysis. The results showed that SOC accumulation was significantly different among vegetation types (P<0.01) and increased with vegetation succession (from 29.10g·kg(-1) in grassland to 73.92g·kg(-1) in primary forest). Soil biochemistry and physical characteristics significantly affected the accumulation of SOC. Soil microbial biomass showed a predominant effect on SOC in each of the four vegetation types. In addition, the soil physical property (especially the silt content) was another controlling factor in the early stages (grassland), and urease activity and saccharase activity were important controlling factors in the early-middle and middle-late stages, respectively. Litter characteristics only showed mild effects on SOC accumulation. Variation partitioning analysis showed that the contribution of sole main factors to SOC variation decreased, while the interaction effect among parameters increased along the succession gradient.

  7. Accumulation of p21 proteins at DNA damage sites independent of p53 and core NHEJ factors following irradiation

    SciTech Connect

    Koike, Manabu; Yutoku, Yasutomo; Koike, Aki

    2011-08-19

    Highlights: {yields} p21 accumulated rapidly at laser-irradiated sites via its C-terminal region. {yields} p21 colocalized with the DSB marker {gamma}-H2AX and the DSB sensor Ku80. {yields} Accumulation of p21 is dependent on PCNA, but not p53 and the NHEJ core factors. {yields} Accumulation activity of p21 was conserved among human and animal cells. {yields} p21 is a useful tool as a detection marker of DNA damaged sites. -- Abstract: The cyclin-dependent kinase (CDK) inhibitor p21 plays key roles in p53-dependent DNA-damage responses, i.e., cell cycle checkpoints, senescence, or apoptosis. p21 might also play a role in DNA repair. p21 foci arise at heavy-ion-irradiated DNA-double-strand break (DSB) sites, which are mainly repaired by nonhomologous DNA-end-joining (NHEJ). However, no mechanisms of p21 accumulation at double-strand break (DSB) sites have been clarified in detail. Recent works indicate that Ku70 and Ku80 are essential for the accumulation of other NHEJ core factors, e.g., DNA-PKcs, XRCC4 and XLF, and other DNA damage response factors, e.g., BRCA1. Here, we show that p21 foci arise at laser-irradiated sites in cells from various tissues from various species. The accumulation of EGFP-p21 was detected in not only normal cells, but also transformed or cancer cells. Our results also showed that EGFP-p21 accumulated rapidly at irradiated sites, and colocalized with the DSB marker {gamma}-H2AX and with the DSB sensor protein Ku80. On the other hand, the accumulation occurred in Ku70-, Ku80-, or DNA-PKcs-deficient cell lines and in human papillomavirus 18-positive cells, whereas the p21 mutant without the PCNA-binding region (EGFP-p21(1-146)) failed to accumulate at the irradiated sites. These findings suggest that the accumulation of p21, but not functional p53 and the NHEJ core factors, is dependent on PCNA. These findings also suggest that the accumulation activity of p21 at DNA damaged sites is conserved among human and animal cells, and p21 is a useful

  8. 40 CFR 90.118 - Certification procedure-service accumulation and usage of deterioration factors.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) CONTROL OF EMISSIONS FROM NONROAD SPARK-IGNITION... recommended lubrication and filter changes, may be performed during service accumulation without...

  9. Anomalous conductivity, Hall factor, magnetoresistance, and thermopower of accumulation layer in SrTiO3

    NASA Astrophysics Data System (ADS)

    Fu, Han; Reich, K. V.; Shklovskii, B. I.

    2016-07-01

    We study the low temperature conductivity of the electron accumulation layer induced by the very strong electric field at the surface of an SrTiO3 sample. Due to the strongly nonlinear lattice dielectric response, the three-dimensional density of electrons n (x ) in such a layer decays with the distance from the surface x very slowly as n (x ) ∝1 /x12 /7 . We show that when the mobility is limited by the surface scattering the contribution of such a tail to the conductivity diverges at large x because of growing time electrons need to reach the surface. We explore truncation of this divergence by the finite sample width, by the bulk scattering rate, by the back gate voltage, or by the crossover to the bulk linear dielectric response with the dielectric constant κ . As a result we arrive at the anomalously large mobility, which depends not only on the rate of the surface scattering, but also on the physics of truncation. Similar anomalous behavior is found for the Hall factor, the magnetoresistance, and the thermopower.

  10. Toward finding a universally applicable parameterization of the β factor for Relaxed Eddy Accumulation applications

    NASA Astrophysics Data System (ADS)

    Vogl, Teresa; Hrdina, Amy; Thomas, Christoph

    2016-04-01

    The traditional eddy covariance (EC) technique requires the use of fast responding sensors (≥ 10 Hz) that do not exist for many chemical species found in the atmosphere. In this case, the Relaxed Eddy Accumulation (REA) method offers a means to calculate fluxes of trace gases and other scalar quantities (Businger and Oncley, 1990) and was originally derived from the eddy accumulation method (EA) first proposed by Desjardins (1972). While REA lessens the requirements for sensors and sampling and thus offers practical appeal, it introduces a dependence of the computed flux from a proportionality factor β. The accuracy of the REA fluxes hinges upon the correct determination of β, which was found to vary between 0.40 and 0.63 (Milne et al., 1999, Ammann and Meixner, 2002, Ruppert et al., 2006). However, formulating a universally valid parameterization for β instead of empirical evaluation has remained a conundrum and has been a main limitation for REA. In this study we take a fresh look at the dependencies and mathematical models of β by analyzing eddy covariance (EC) data and REA simulations for two field experiments in drastically contrasting environments: an exclusively physically driven environment in the Dry Valleys of Antarctica, and a biologically active system in a grassland in Germany. The main objective is to work toward a model parameterization for β that can be applied over wide range of surface conditions and forcings without the need for empirical evaluation, which is not possible for most REA applications. Our study discusses two different models to define β: (i) based upon scalar-scalar similarity, in which a different scalar is measured with fast-response sensors as a proxy for the scalar of interest, here referred to as β0; and (ii) computed solely from the vertical wind statistics, assuming a linear relationship between the scalar of interest and the vertical wind speed, referred to as βw. Results are presented for the carbon

  11. Soil and plant factors influencing the accumulation of heavy metals by plants.

    PubMed Central

    Cataldo, D A; Wildung, R E

    1978-01-01

    The use of plants to monitor heavy metal pollution in the terrestrial environment must be based on a cognizance of the complicated, integrated effects of pollutant source and soil-plant variables. To be detectable in plants, pollutant sources must significantly increase the plant available metal concentration in soil. The major factor governing metal availability to plants in soils is the solubility of the metal associated with the solid phase, since in order for root uptake to occur, a soluble species must exist adjacent to the root membrane for some finite period. The rate of release and form of this soluble species will have a strong influence on the rate and extent of uptake and, perhaps, mobility and toxicity in the plant and consuming animals. The factors influencing solubility and form of available metal species in soil vary widely geographically and include the concentration and chemical form of the element entering soil, soil properties (endogenous metal concentration, mineralogy, particle size distribution), and soil processes (e.g., mineral weathering, microbial activity), as these influence the kinetics of sorption reactions, metal concentration in solution and the form of soluble and insoluble chemical species. The plant root represents the first barrier to the selective accumulation of ions present in soil solution. Uptake and kinetic data for nutrient ions and chemically related nonnutrient analogs suggest that metabolic processes associated with root absorption of nutrients regulate both the affinity and rate of absorption of specific nonnutrient ions. Detailed kinetic studies of Ni, Cd, and Tl uptake by intact plants demonstrate multiphasic root absorption processes over a broad concentration range, and the use of transport mechanisms in place for the nutrient ions Cu, Zn, and K. Advantages and limitations of higher plants as indicators of increased levels of metal pollution are discussed in terms of these soil and plant phenomena. PMID:367766

  12. Accumulation of butyltins in sediments and lipid tissues of the Asian clam, Potamocorbula amurensis, near Mare Island Naval Shipyard, San Francisco Bay

    USGS Publications Warehouse

    Pereira, W.E.; Wade, T.L.; Hostettler, F.D.; Parchaso, F.

    1999-01-01

    Studies of butyltin compounds in soil, benthic sediments and the Asian clam Potamocorbula amurensis were conducted at the former Mare Island Naval Shipyard, and nearby Mare Island and Carquinez Straits in San Francisco Bay, California. Soils from a sandblast abrasives dump site at the shipyard contained low concentrations of mono-, di- and tributyltin (0.3-52 ng/g, total butyltin). Similarly, concentrations of total butyltin in benthic sediments from nearby Mare Island and Carquinez Straits ranged from 1.3 to 8.1 ng/g. In contrast, clams accumulated much greater concentrations (152-307 ng/g, total butyltin). Tributyltin (TBT) and dibutyltin (DBT) made up from 54-85% to 15-46%, respectively, of the total butyltin body burden of the clams. Biota Sediment Accumulation Factors (BSAFs) for butyltins in Potamocorbula were in reasonable agreement with literature values; they are greater than those of neutral hydrophobic compounds, suggesting that partitioning and binding processes may be involved in bioaccumulation. Tributyltin is a potent endocrine disrupting chemical. There is potential for long-term chronic effects of TBT in San Francisco Bay.

  13. Endothelial cell protein C receptor-mediated redistribution and tissue-level accumulation of factor VIIa

    PubMed Central

    Clark, C A; Vatsyayan, R; Hedner, U; Esmon, C T; Pendurthi, U R; Rao, L V M

    2012-01-01

    Background Recent studies show that activated factor VII (FVIIa) binds to the endothelial cell protein C receptor (EPCR) on the vascular endothelium; however, the importance of this interaction in hemostasis or pathophysiology is unknown. Objective The aim of the present study was to investigate the role of the FVIIa interaction with EPCR on the endothelium in mediating FVIIa transport from the circulation to extravascular tissues. Methods Wild-type, EPCR-deficient or ECPR-over-expressing mice were injected with human recombinant (r)FVIIa (120 μg kg−1 body weight) via the tail vein. At varying time intervals after rFVIIa administration, blood and various tissues were collected to measure FVIIa antigen and activity levels. Tissue sections were analyzed by immunohistochemistry for FVIIa and EPCR. Results The data reveal that, after intravenous (i.v.) injection, rFVIIa rapidly disappears from the blood and associates with the endothelium in an EPCR-dependent manner. Immunohistochemical analyses revealed that the association of FVIIa with the endothelium was maximal at 30 min and thereafter progressively declined. The FVIIa association with the endothelium was undetectable at time points exceeding 24 h post-FVIIa administration. The levels of rFVIIa accumulated in tissue correlate with expression levels of EPCR in mice and FVIIa associated with tissues remained functionally active for periods of at least 7 days. Conclusions The observation that an EPCR-dependent association of FVIIa with the endothelium is most pronounced soon after rFVIIa administration and subsequently declines temporally, combined with the retention of functionally active FVIIa in tissue homogenates for extended periods, indicates that FVIIa binding to EPCR on the endothelium facilitates the transport of FVIIa from circulation to extravascular tissues where TF resides. PMID:22950420

  14. [Soil nutrient accumulation and its affecting factors during vegetation succession in karst peak-cluster depressions of South China].

    PubMed

    Zhang, Wei; Wang, Ke-Lin; Liu, Su-Juan; Ye, Ying-Ying; Pan, Fu-Jing; He, Xu-Yang

    2013-07-01

    Taking the typical karst peak-cluster depressions in Huanjiang County of northwest Guangxi as the objects, and by using the method of replacing time with space, an analysis was made on the dynamic changes of top soil (0-15 cm) nutrients and their dominant controlling factors during the process of vegetation succession. With the positive succession of vegetation (herb-shrub-secondary forest-primary forest), the soil organic carbon (SOC), total nitrogen (TN), and total phosphorus (TP) contents increased significantly, with the soil SOC, TN, and TP increased from 29.1 g x kg(-1), 2.48 g x kg(-1), and 0.72 g x kg(-1) in herb community to 73.9 g x kg(-1), 8.10 g x kg(-1), and 1.6 g x kg(-1) in primary forest, respectively, which indicated that the positive succession of vegetation was helpful to the soil nutrient accumulation. The soil cation exchange capacity (CEC) had close relationships with the soil SOC and TN, being the primary controlling factor for the accumulation of the soil C and N. The litter P content, C/P ratio, and N/P ratio were the major factors controlling the P accumulation in the topsoil. The litters higher P content and N/P ratio and smaller C/P ratio were helpful for the P accumulation. Topographic indices (slope, aspect, and rock exposure ratio) had little effects on the soil nutrients.

  15. Genetic Factors Involved in Fumonisin Accumulation in Maize Kernels and Their Implications in Maize Agronomic Management and Breeding

    PubMed Central

    Santiago, Rogelio; Cao, Ana; Butrón, Ana

    2015-01-01

    Contamination of maize with fumonisins depends on the environmental conditions; the maize resistance to contamination and the interaction between both factors. Although the effect of environmental factors is a determinant for establishing the risk of kernel contamination in a region, there is sufficient genetic variability among maize to develop resistance to fumonisin contamination and to breed varieties with contamination at safe levels. In addition, ascertaining which environmental factors are the most important in a region will allow the implementation of risk monitoring programs and suitable cultural practices to reduce the impact of such environmental variables. The current paper reviews all works done to address the influence of environmental variables on fumonisin accumulation, the genetics of maize resistance to fumonisin accumulation, and the search for the biochemical and/or structural mechanisms of the maize plant that could be involved in resistance to fumonisin contamination. We also explore the outcomes of breeding programs and risk monitoring of undertaken projects. PMID:26308050

  16. Genetic Factors Involved in Fumonisin Accumulation in Maize Kernels and Their Implications in Maize Agronomic Management and Breeding.

    PubMed

    Santiago, Rogelio; Cao, Ana; Butrón, Ana

    2015-08-20

    Contamination of maize with fumonisins depends on the environmental conditions; the maize resistance to contamination and the interaction between both factors. Although the effect of environmental factors is a determinant for establishing the risk of kernel contamination in a region, there is sufficient genetic variability among maize to develop resistance to fumonisin contamination and to breed varieties with contamination at safe levels. In addition, ascertaining which environmental factors are the most important in a region will allow the implementation of risk monitoring programs and suitable cultural practices to reduce the impact of such environmental variables. The current paper reviews all works done to address the influence of environmental variables on fumonisin accumulation, the genetics of maize resistance to fumonisin accumulation, and the search for the biochemical and/or structural mechanisms of the maize plant that could be involved in resistance to fumonisin contamination. We also explore the outcomes of breeding programs and risk monitoring of undertaken projects.

  17. Baseline soil variation is a major factor in arsenic accumulation in Bengal Delta paddy rice.

    PubMed

    Lu, Ying; Adomako, Eureka E; Solaiman, A R M; Islam, M Rafiqul; Deacon, Claire; Williams, P N; Rahman, G K M M; Meharg, Andrew A

    2009-03-15

    Factors responsible for paddy soil arsenic accumulation in the tubewell irrigated systems of the Bengal Delta were investigated. Baseline (i.e., nonirrigated) and paddy soils were collected from 30 field systems across Bangladesh. For each field, soil sampled at dry season (Boro) harvest i.e., the crop cycle irrigated with tubewell water, was collected along a 90 m transect away from the tubewell irrigation source. Baseline soil arsenic levels ranged from 0.8 to 21. mg/kg, with lower values found on the Pliestocene Terrace around Gazipur (average, 1.6 +/- 0.2 mg/kg), and higher levels found in Holecene sediment tracts of Jessore and Faridpur (average, 6.6 +/- 1.0 mg/kg). Two independent approaches were used to assess the extent of arsenic build-up in irrigated paddy soils. First, arsenic build-up in paddy soil at the end of dry season production (irrigated - baseline soil arsenic) was regressed against number of years irrigated and tubewell arsenic concentration. Years of irrigation was not significant (P = 0.711), indicating no year-on-year arsenic build-up, whereas tubewell As concentration was significant (P = 0.008). The second approach was analysis of irrigated soils for 20 fields over 2 successive years. For nine of the fields there was a significant (P < 0.05) decrease in soil arsenic from year 1 to 2, one field had a significant increase, whereas there was no change for the remaining 10. Over the dry season irrigation cycle, soil arsenic built-up in soils at a rate dependent on irrigation tubewell water, 35* (tubewell water concentration in mg/kg, triple bond mg/L). Grain arsenic rises steeply at low soil/shoot arsenic levels, plateauing out at concentratations. Baseline soil arsenic at Faridpur sites corresponded to grain arsenic levels at the start of this saturation phase. Therefore, variation in baseline levels of soil arsenic leads to a large range in grain arsenic. Where sites have high baseline soil arsenic, further additional arsenic from irrigation

  18. Dauricine inhibits insulin-like growth factor-I-induced hypoxia inducible factor 1α protein accumulation and vascular endothelial growth factor expression in human breast cancer cells

    PubMed Central

    Tang, Xu-dong; Zhou, Xin; Zhou, Ke-yuan

    2009-01-01

    Aim: To investigate the effects of dauricine (Dau) on insulin-like growth factor-I (IGF-I)-induced hypoxia inducible factor 1α (HIF-1α) and vascular endothelial growth factor (VEGF) expression in human breast cancer cells (MCF-7). Methods: Serum-starved MCF-7 cells were pretreated for 1 h with different concentrations of Dau, followed by incubation with IGF-I for 6 h. HIF-1α and VEGF protein expression levels were analyzed by Western blotting and ELISA, respectively. HIF-1α and VEGF mRNA levels were determined by real-time PCR. In vitro angiogenesis was observed via the human umbilical vein endothelial cell (HUVEC) tube formation assay. An in vitro invasion assay on HUVECs was performed. Results: Dau significantly inhibited IGF-I-induced HIF-1α protein expression but had no effect on HIF-1α mRNA expression. However, Dau remarkably suppressed VEGF expression at both protein and mRNA levels in response to IGF-I. Mechanistically, Dau suppressed IGF-I-induced HIF-1α and VEGF protein expression mainly by blocking the activation of PI-3K/AKT/mTOR signaling pathway. In addition, Dau reduced IGF-I-induced HIF-1α protein accumulation by inhibiting its synthesis as well as by promoting its degradation. Functionally, Dau inhibited angiogenesis in vitro. Moreover, Dau had a direct effect on IGF-I-induced invasion of HUVECs. Conclusion: Dau inhibits human breast cancer angiogenesis by suppressing HIF-1α protein accumulation and VEGF expression, which may provide a novel potential mechanism for the anticancer activities of Dau in human breast cancer. PMID:19349962

  19. Generating favorable growth factor and protease release profiles to enable extracellular matrix accumulation within an in vitro tissue engineering environment.

    PubMed

    Zhang, Xiaoqing; Battiston, Kyle G; Labow, Rosalind S; Simmons, Craig A; Santerre, J Paul

    2017-02-24

    Tissue engineering (particularly for the case of load-bearing cardiovascular and connective tissues) requires the ability to promote the production and accumulation of extracellular matrix (ECM) components (e.g., collagen, glycosaminoglycan and elastin). Although different approaches have been attempted in order to enhance ECM accumulation in tissue engineered constructs, studies of underlying signalling mechanisms that influence ECM deposition and degradation during tissue remodelling and regeneration in multi-cellular culture systems have been limited. The current study investigated vascular smooth muscle cell (VSMC)-monocyte co-culture systems using different VSMC:monocyte ratios, within a degradable polyurethane scaffold, to assess their influence on ECM generation and degradation processes, and to elucidate relevant signalling molecules involved in this in vitro vascular tissue engineering system. It was found that a desired release profile of growth factors (e.g. insulin growth factor-1 (IGF-1)) and hydrolytic proteases (e.g. matrix-metalloproteinases 2, 9, 13 and 14 (MMP2, MMP9, MMP13 and MMP14)), could be achieved in co-culture systems, yielding an accumulation of ECM (specifically for 2:1 and 4:1 VSMC:monocyte culture systems). This study has significant implications for the tissue engineering field (including vascular tissue engineering), not only because it identified important cytokines and proteases that control ECM accumulation/degradation within synthetic tissue engineering scaffolds, but also because the established culture systems could be applied to improve the development of different types of tissue constructs.

  20. Factors Affecting Wealth Accumulation in Hispanic Households: A Comparative Analysis of Stock and Home Asset Utilization

    ERIC Educational Resources Information Center

    Fontes, Angela; Kelly, Nicole

    2013-01-01

    This research addresses differences between Hispanic ("N" = 2,333) and White ("N" = 15,521) households in the ownership and allocation of two representative measures of wealth accumulation, stock and homeownership. Using data from the 2008 panel of the Survey of Income and Program Participation, this research estimates a…

  1. Lipid-Derived Biofuels: Determination of Factors that Control Triglyceride Accumulation in Microalgae

    DTIC Science & Technology

    2012-10-30

    Accumulation in Microalgae Principal Investigator Dr. K.E. Cooksey Department of Microbiology 109 Lewis Hall Montana State University...cultures to find the extent to which previously published results can be considered general for microalgae . Task 2. Quantify growth kinetics and...diatoms cultures to find the extent to which previous results can be found to be general for microalgae . Before this project, detailed

  2. Environmental and Genetic Factors Associated with Solanesol Accumulation in Potato Leaves

    PubMed Central

    Campbell, Raymond; Freitag, Sabine; Bryan, Glenn J.; Stewart, Derek; Taylor, Mark A.

    2016-01-01

    Solanesol is a high value 45-carbon, unsaturated, all-trans-nonaprenol isoprenoid. Recently solanesol has received particular attention because of its utility, both in its own right and as a precursor in the production of numerous compounds used in the treatment of disease states. Solanesol is found mainly in solanaceous crops such as potato, tomato, tobacco and pepper where it accumulates in the foliage. There is considerable potential to explore the extraction of solanesol from these sources as a valuable co-product. In this study we have characterized the genetic variation in leaf solanesol content in a biparental, segregating diploid potato population. We demonstrate that potato leaf solanesol content is genetically controlled and identify several quantitative trait loci associated with leaf solanesol content. Transient over-expression of genes from the methylerythritol 4-phosphate (MEP) and mevalonic acid (MVA) pathways, either singly or in combination, resulted in enhanced accumulation of solanesol in leaves of Nicotiana benthamiana, providing insights for genetically engineering the pathway. We also demonstrate that in potato, leaf solanesol content is enhanced by up to six-fold on exposure to moderately elevated temperature and show corresponding changes in expression patterns of MEP and MVA genes. Our combined approaches offer new insights into solanesol accumulation and strategies for developing a bio-refinery approach to potato production. PMID:27610114

  3. Using ANN to predict E. coli accumulation in coves based on interaction amongst various physical, chemical and biological factors

    NASA Astrophysics Data System (ADS)

    Dwivedi, D.; Mohanty, B. P.; Lesikar, B. J.

    2008-12-01

    The accumulation of Escherichia Coli (E. coli) in canals, coves and streams is the result of a number of interacting processes operating at multiple spatial and temporal scales. Fate and transport of E. coli in surface water systems is governed by different physical, chemical, and biological processes. Various models developed to quantify each of these processes occurring at different scales are not so far pooled into a single predictive model. At present, very little is known about the fate and transport of E. coli in the environment. We hypothesize that E. coli population heterogeneity in canals and coves is affected by physical factors (average stream width and/ depth, secchi depth, flow and flow severity, day since precipitation, aquatic vegetation, solar radiation, dissolved and total suspended solids etc.); chemical factors (basic water quality, nutrients, organic compounds, pH, and toxicity etc.); and biological factors (type of bacterial strain, predation, and antagonism etc.). The specific objectives of this study are to: (1) examine the interactions between E. coli and various coupled physical, chemical and biological factors; (2) examine the interactions between E. coli and toxic organic pollutants and other pathogens (viruses); and (3) evaluate qualitatively the removal efficiency of E. coli. We suggest that artificial neural networks (ANN) may be used to provide a possible solution to this problem. To demonstrate the application of the approach, we develop an ANN representing E. coli accumulation in two polluted sites at Lake Granbury in the upper part of the Brazos River in North Central Texas. The graphical structure of ANN explicitly represents cause- and-effect relationship between system variables. Each of these relationships can then be quantified independently using an approach suitable for the type and scale of information available. Preliminary results revealed that E. coli concentrations in canals show seasonal variations regardless of change

  4. Endogenous macrophage migration inhibitory factor reduces the accumulation and toxicity of misfolded SOD1 in a mouse model of ALS

    PubMed Central

    Leyton-Jaimes, Marcel F.; Benaim, Clara; Abu-Hamad, Salah; Kahn, Joy; Guetta, Amos; Bucala, Richard; Israelson, Adrian

    2016-01-01

    Mutations in superoxide dismutase (SOD1) cause amyotrophic lateral sclerosis (ALS), a fatal neurodegenerative disease characterized by the loss of upper and lower motor neurons in the brain and spinal cord. It has been suggested that the toxicity of mutant SOD1 results from its misfolding and accumulation on the cytoplasmic faces of intracellular organelles, including the mitochondria and endoplasmic reticulum (ER) of ALS-affected tissues. Recently, macrophage migration inhibitory factor (MIF) was shown to directly inhibit the accumulation of misfolded SOD1 and its binding to intracellular membranes, but the role of endogenous MIF in modulating SOD1 misfolding in vivo remains unknown. To elucidate this role, we bred MIF-deficient mice with SOD1G85R mice, which express a dismutase-inactive mutant of SOD1 and are considered a model of familial ALS. We found that the accumulation of misfolded SOD1, its association with mitochondrial and ER membranes, and the levels of sedimentable insoluble SOD1 aggregates were significantly higher in the spinal cords of SOD1G85R-MIF−/− mice than in their SOD1G85R-MIF+/+ littermates. Moreover, increasing MIF expression in neuronal cultures inhibited the accumulation of misfolded SOD1 and rescued from mutant SOD1-induced cell death. In contrast, the complete elimination of endogenous MIF accelerated disease onset and late disease progression and shortened the lifespan of the SOD1G85R mutant mice. These findings indicate that MIF plays a significant role in the folding and misfolding of SOD1 in vivo, and they have implications for the potential therapeutic role of up-regulating MIF within the nervous system to modulate the selective accumulation of misfolded SOD1. PMID:27551074

  5. Factors Influencing the Accumulation and Subsurface Transport of Fecal Indicator Bacteria near the Shoreline at Freshwater Beaches

    NASA Astrophysics Data System (ADS)

    Wu, M. Z.; O'Carroll, D. M.; Vogel, L. J.; Robinson, C. E.

    2015-12-01

    Beach sand near the shoreline acts as a reservoir for fecal contaminants with fecal indicator bacteria (FIB) often orders of magnitude higher than in adjacent surface waters. This reservoir poses a human health risk and can also act as an important non-point contamination source for surface waters. Beach water quality advisories or closures can be issued when FIB (Escherichia coli (E. coli), enterococci (ENT)) concentrations are elevated in the surface water. The factors controlling the transport and accumulation of FIB in the foreshore sand are not well understood, though this is required to manage and mitigate this source. Multiple sources may contribute to the accumulation of FIB in sand, with recent studies suggesting that the continuous influx of surface water across the sediment-water interface may be a dominant source at many beaches.The study objective was to develop understanding of the physical processes controlling the accumulation and transport of FIB in beach sand. Field measurements were combined with numerical modelling to evaluate the role of low-energy lapping waves in delivering FIB to the saturated foreshore sand at freshwater beaches. E. coli and ENT were measured at two beaches in Ontario, Canada at depths of up to 1 and 2 m, respectively, below the water table. A numerical model simulating wave-induced groundwater recirculations coupled with microbial transport (using colloid filtration theory) showed that the different FIB distributions measured at the two beaches was due mainly to the different beach slope and terrestrial groundwater flow. The model was applied to assess the impact of beach, wave and bacterial parameters on FIB accumulation. The infiltration zone width, average infiltration velocity and infiltration rate were shown to ultimately control the amount and spatial distribution of FIB in the sand. The study findings are important in understanding factors controlling the transport of FIB at the sediment-water interface of

  6. Key factors, Soil N Processes, and nitrite accumulation affecting nitrous oxide emissions

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A better understanding of the key factors affecting nitrous oxide (N2O) emission and potential mitigation strategies is essential for sustainable agriculture. The objective of this study was to examine the important factors affecting N2O emissions, soil processes involved, and potential mitigation s...

  7. In situ bioavailability of DDT and Hg in sediments of the Toce River (Lake Maggiore basin, Northern Italy): accumulation in benthic invertebrates and passive samplers.

    PubMed

    Pisanello, Francesca; Marziali, Laura; Rosignoli, Federica; Poma, Giulia; Roscioli, Claudio; Pozzoni, Fiorenzo; Guzzella, Licia

    2016-06-01

    DDT and mercury (Hg) contamination in the Toce River (Northern Italy) was caused by a factory producing technical DDT and using a mercury-cell chlor-alkali plant. In this study, DDT and Hg contamination and bioavailability were assessed by using different approaches: (1) direct evaluation of sediment contamination, (2) assessment of bioaccumulation in native benthic invertebrates belonging to different taxonomic/functional groups, and (3) evaluation of the in situ bioavailability of DDT and Hg using passive samplers. Sampling sites were selected upstream and downstream the industrial plant along the river axis. Benthic invertebrates (Gammaridae, Heptageniidae, and Diptera) and sediments were collected in three seasons and analyzed for DDT and Hg content and the results were used to calculate the biota sediment accumulation factor (BSAF). Polyethylene passive samplers (PEs) for DDT and diffusive gradients in thin films (DGTs) for Hg were deployed in sediments to estimate the concentration of the toxicants in pore water. Analysis for (DDx) were performed using GC-MS. Accuracy was within ±30 % of the certified values and precision was >20 % relative standard deviation (RSD). Total mercury concentrations were determined using an automated Hg mercury analyzer. Precision was >5 % and accuracy was within ±10 % of certified values. The results of all the approaches (analysis of sediment, biota, and passive samplers) showed an increasing contamination from upstream to downstream sites. BSAF values revealed the bioavailability of both contaminants in the study sites, with values up to 49 for DDx and up to 3.1 for Hg. No correlation was found between values in sediments and the organisms. Concentrations calculated using passive samplers were correlated with values in benthic invertebrates, while no correlation was found with concentrations in sediments. Thus, direct analysis of toxicant in sediments does not provide a measurement of bioavailability. On the contrary

  8. Chemical elements in pearl oysters (Paxyodon ponderosus), phytoplankton and estuarine sediments from eastern Amazon (Northern Brazil): Bioaccumulation factors and trophic transfer factors

    NASA Astrophysics Data System (ADS)

    Vilhena, Maria P. S. P.; Costa, Marcondes L.; Berrêdo, José F.; Paiva, Rosildo S.; Souza, Crisvaldo C. S.

    2016-04-01

    The current study was conducted near Barcarena County, which is a mid-sized urban center where aluminum ore processing industries (bauxite) and Vila do Conde cargo terminal are located. It aims to discuss the bioaccumulation factors as well as factors related to the trophic transfer of chemical elements in water, oyster, phytoplankton and bottom sediments from an estuary in the Brazilian Northern coast. The bioaccumulation factor (BAF), trophic transfer factor (TTF) and biota-sediment-water were used to correlate the contents of chemical elements found in organisms. The sediment, surface water, phytoplankton and pearl oysters chemical composition was analyzed by ICP-OES and ICP-MS. Pearl oysters showed K, Ca, Mg, P, Mn, Fe, Zn, Al, Ba and Pb accumulation, which concentration increase is associated with their diet (phytoplankton). Al concentrations are 14 times higher in pearl oysters (Paxyodon ponderosus), assuming that they are associated with wastewater emissions and with industrialization processes in the area. BAF and BSAF values are 1000 times higher than the metal concentrations in water and bioavailable fraction concentrations. The oyster-phytoplankton trophic transfer factor indicates that P, Ba, Ca, Na, Cd and Zn showed the largest transfers (from 5 to 19). These trophic transfers may be sufficient to cause significant ecotoxicological effects on the region biota.

  9. Icaritin Inhibits Collagen Degradation-Related Factors and Facilitates Collagen Accumulation in Atherosclerotic Lesions: A Potential Action for Plaque Stabilization

    PubMed Central

    Zhang, Zong-Kang; Li, Jie; Yan, De-Xin; Leung, Wing-Nang; Zhang, Bao-Ting

    2016-01-01

    Most acute coronary syndromes result from rupture of vulnerable atherosclerotic plaques. The collagen content of plaques may critically affect plaque stability. This study tested whether Icaritin (ICT), an intestinal metabolite of Epimedium-derived flavonoids, could alter the collagen synthesis/degradation balance in atherosclerotic lesions. Rabbits were fed with an atherogenic diet for four months. Oral administration of ICT (10 mg·kg−1·day−1) was started after two months of an atherogenic diet and lasted for two months. The collagen degradation-related parameters, including macrophages accumulation, content and activity of interstitial collagenase-1 (MMP-1), and the collagen synthesis-related parameters, including amount and distribution of smooth muscle cells (SMC) and collagen mRNA/protein levels, were evaluated in the aorta. ICT reduced plasma lipid levels, inhibited macrophage accumulation, lowered MMP-1 mRNA and protein expression, and suppressed proteolytic activity of pro-MMP-1 and MMP-1 in the aorta. ICT changed the distribution of the SMCs towards the fibrous cap of lesions without increasing the amount of SMCs. Higher collagen protein content in lesions and aorta homogenates was observed with ICT treatment compared with the atherogenic diet only, without altered collagen mRNA level. These results suggest that ICT could inhibit the collagen degradation-related factors and facilitate collagen accumulation in atherosclerotic lesions, indicating a new potential of ICT in atherosclerotic plaques. PMID:26828485

  10. Icaritin Inhibits Collagen Degradation-Related Factors and Facilitates Collagen Accumulation in Atherosclerotic Lesions: A Potential Action for Plaque Stabilization.

    PubMed

    Zhang, Zong-Kang; Li, Jie; Yan, De-Xin; Leung, Wing-Nang; Zhang, Bao-Ting

    2016-01-28

    Most acute coronary syndromes result from rupture of vulnerable atherosclerotic plaques. The collagen content of plaques may critically affect plaque stability. This study tested whether Icaritin (ICT), an intestinal metabolite of Epimedium-derived flavonoids, could alter the collagen synthesis/degradation balance in atherosclerotic lesions. Rabbits were fed with an atherogenic diet for four months. Oral administration of ICT (10 mg·kg(-1)·day(-1)) was started after two months of an atherogenic diet and lasted for two months. The collagen degradation-related parameters, including macrophages accumulation, content and activity of interstitial collagenase-1 (MMP-1), and the collagen synthesis-related parameters, including amount and distribution of smooth muscle cells (SMC) and collagen mRNA/protein levels, were evaluated in the aorta. ICT reduced plasma lipid levels, inhibited macrophage accumulation, lowered MMP-1 mRNA and protein expression, and suppressed proteolytic activity of pro-MMP-1 and MMP-1 in the aorta. ICT changed the distribution of the SMCs towards the fibrous cap of lesions without increasing the amount of SMCs. Higher collagen protein content in lesions and aorta homogenates was observed with ICT treatment compared with the atherogenic diet only, without altered collagen mRNA level. These results suggest that ICT could inhibit the collagen degradation-related factors and facilitate collagen accumulation in atherosclerotic lesions, indicating a new potential of ICT in atherosclerotic plaques.

  11. Zeaxanthin biofortification of sweet-corn and factors affecting zeaxanthin accumulation and colour change.

    PubMed

    O'Hare, Tim J; Fanning, Kent J; Martin, Ian F

    2015-04-15

    Zeaxanthin, along with its isomer lutein, are the major carotenoids contributing to the characteristic colour of yellow sweet-corn. From a human health perspective, these two carotenoids are also specifically accumulated in the human macula, and are thought to protect the photoreceptor cells of the eye from blue light oxidative damage and to improve visual acuity. As humans cannot synthesise these compounds, they must be accumulated from dietary components containing zeaxanthin and lutein. In comparison to most dietary sources, yellow sweet-corn (Zea mays var. rugosa) is a particularly good source of zeaxanthin, although the concentration of zeaxanthin is still fairly low in comparison to what is considered a supplementary dose to improve macular pigment concentration (2mg/person/day). In our present project, we have increased zeaxanthin concentration in sweet-corn kernels from 0.2 to 0.3mg/100g FW to greater than 2.0mg/100g FW at sweet-corn eating-stage, substantially reducing the amount of corn required to provide the same dosage of zeaxanthin. This was achieved by altering the carotenoid synthesis pathway to more than double total carotenoid synthesis and to redirect carotenoid synthesis towards the β-arm of the pathway where zeaxanthin is synthesised. This resulted in a proportional increase of zeaxanthin from 22% to 70% of the total carotenoid present. As kernels increase in physiological maturity, carotenoid concentration also significantly increases, mainly due to increased synthesis but also due to a decline in moisture content of the kernels. When fully mature, dried kernels can reach zeaxanthin and β-carotene concentrations of 8.7 mg/100g and 2.6 mg/100g, respectively. Although kernels continue to increase in zeaxanthin when harvested past their normal harvest maturity stage, the texture of these 'over-mature' kernels is tough, making them less appealing for fresh consumption. Increase in zeaxanthin concentration and other orange carotenoids such as

  12. Environmental factors contributing to the accumulation of E. coli in the foreshore sand and porewater at freshwater beaches

    NASA Astrophysics Data System (ADS)

    Vogel, L. J.; Robinson, C. E.; Edge, T.; O'Carroll, D. M.

    2015-12-01

    E. coli concentrations in the foreshore sand and porewater (herein referred to as the foreshore reservoir) at beaches are often elevated relative to adjacent surface waters. There is limited understanding of the factors controlling the delivery and accumulation of E. coli in this reservoir. Understanding the buildup of E. coli, and related microbes, in the foreshore reservoir is important as it can act as a non-point source to surface waters and contribute a significant health risk to beach goers. Possible sources that contribute to high levels of E. coli in the foreshore reservoir include infiltration of lake water through wave runup, direct deposition of fecal sources (e.g. bird droppings), and shallow groundwater flow from inland sources (e.g. septic systems). The accumulation of E. coli in the foreshore reservoir is complex due to the dynamic interactions between the foreshore sand and porewater, and shallow waters. The objective of this study was to quantify the temporal variability of E. coli concentrations in the foreshore sand and porewater at freshwater beaches and to identify the environmental factors (e.g. temperature, rainfall, wind and wave conditions) controlling this variability. The temporal variability in E. coli concentrations in the foreshore reservoir was characterized by collecting samples (surface water, porewater, saturated and unsaturated foreshore sand) approximately once a week at three beaches along on the Great Lakes from May-October 2014 and 2015. These beaches had different sand types ranging from fine to coarse. More frequent sampling was also conducted in July-August 2015 with samples collected daily over a 40 day period at one beach. The data was analyzed to determine the relationships between the E. coli concentrations and environmental variables as well as changes in sand level profiles and groundwater level fluctuations. Insight into how and why E. coli accumulates in the foreshore reservoir is essential to develop effective

  13. Environmental factors related to fungal infection and fumonisin accumulation during the development and drying of white maize kernels.

    PubMed

    Cao, Ana; Santiago, Rogelio; Ramos, Antonio J; Marín, Sonia; Reid, Lana M; Butrón, Ana

    2013-06-03

    In Southern Europe where whole maize kernels are ground and used for making bread and other food products, infection of the kernels by Fusarium verticillioides and subsequent fumonisin contamination pose a serious safety issue. The influence of environmental factors on this fungal infection and mycotoxin accumulation as the kernel develops has not been fully determined, especially in such food grade maize. The objectives of the present study were to determine which environmental factors may contribute to kernel invasion by F. verticillioides and fumonisin accumulation as kernels develop and dry in naturally infected white maize. Three maize hybrids were planted at two different sowing dates and kernel samples were collected 20, 40, 60, 80 and 100 days after silking. The percentage of kernels infected, and ergosterol and fumonisin contents were recorded for each sampling. F. verticillioides was the most prevalent species identified as the kernels developed. Temperature and moisture conditions during the first 80 days after silking favored natural kernel infection by F. verticillioides rather than by Aspergillus or Penicillium species. Fumonisin was found in kernels as early as 20 days after silking however significant fumonisin accumulation above levels acceptable in the EU did not occur until after physiological maturity of the kernel indicating that kernel drying in the field poses a high risk. Our results suggest that this could be due to increasing kernel damage by insects that favor fungal development, such as the damage by the moth Sitotroga cerealella, and to the occurrence of stress conditions for F. verticillioides growth that could trigger fumonisin biosynthesis, such as exposure to suboptimal temperatures for growth simultaneously with low water activity.

  14. Influence of formulation factors on methyl-ALA-induced protoporphyrin IX accumulation in vivo.

    PubMed

    Donnelly, Ryan F; Juzenas, Petras; McCarron, Paul A; Ma, Li-Wei; Woolfson, A David; Moan, Johan

    2006-09-01

    Photodynamic therapy (PDT) is a medical treatment by which a combination of a photosensitising drug and visible light cause the destruction of selected cells. Thick lesions, such as nodular basal cell carcinomas (BCCs), or lesions with overlying keratinous debris, are reported as being difficult to eradicate using 5-aminolevulinic acid-based photodynamic therapy (ALA-PDT). Such treatment failures have been attributed to the shallow penetration of water-soluble drugs like ALA. In addition, the current scarcity of sophisticated drug delivery research centered on PDT applications has meant that accurate comparison of similar clinical studies is difficult. This paper investigates, for the first time, novel drug delivery systems for controlled drug delivery of methyl-ALA (M-ALA). Pressure sensitive adhesive (PSA) and bioadhesive patches containing defined M-ALA loadings and a standard cream containing equivalent amounts of drug were applied to the skin of mice for defined periods of time and the fluorescence of the protoporphyrin IX (PpIX) induced measured over 24h. Of major importance, the PSA patches containing low drug loadings induced high PpIX levels, which were limited to the site of application, after only 1h applications. Such systems have the potential to improve selectivity of PpIX accumulation, increase simplicity of treatment and, due to the low drug loadings required, reduce costs of clinical PDT. PSA patches would be most suitable for application to areas of dry skin, while bioadhesive patches would be suitable for moist areas, such as the mouth or lower female reproductive tract and have been shown here to induce significant PpIX production at the site of application after 4h applications of patches containing high drug loadings.

  15. Simulation of the effects of critical factors on ozone formation and accumulation in the greater Athens area

    NASA Astrophysics Data System (ADS)

    Bossioli, Elissavet; Tombrou, Maria; Dandou, Aggeliki; Soulakellis, Nikos

    2007-01-01

    In the present study, the temporal and spatial dynamics of the ozone production in the greater Athens area (GAA) is examined by using the photochemical UAM-V model coupled with the meteorological MM5 model. Several numerical experiments were performed in order to investigate and to quantify the effect of critical factors that conduce to the ozone formation and accumulation during ozone episodes. The initial scenario is able to reproduce the observed ozone patterns, but it underestimates the observed peaks in most of the downwind suburban stations. Using process analysis, we demonstrate the contribution of chemical and physical processes to ozone formation and destruction. The inclusion of biogenic emissions and their distribution based on a satellite vegetation index, as well as the adjustment of the speciation of the anthropogenic NMVOC emissions according to specific characteristics measured in street and aged city plumes, lead to a more realistic description of the urban mixture and thus of the ozone production. The effect of the urban sector introduced via a simplified urbanized meteorological data set, provoke a differentiation of the spatial pattern attributed to the accumulation of the primary NOX pollutants inside the city center and to the consequent limited horizontal advection toward the peripheral zone. Finally, the ozone background turned out to be a key factor for the model performance. The statistical evaluation of the results reveals the importance and the necessity of implementing all the above modifications; the persistence of some discrepancies is associated with meteorological or modeling coupling limitations.

  16. THE RELATIONSHIP OF BIOACCUMULATIVE CHEMICALS IN WATER AND SEDIMENT TO RESIDUES IN FISH: A VISUALIZATION APPROACH

    EPA Science Inventory

    A visualization approach is developed and presented for depicting and interpreting bioaccumulation relationships and data, i.e., bioaccumulation factors (BAFs), biota-sediment accumulation factors (BSAFs) and chemical residues in fish, using water-sediment chemical concentration ...

  17. Accumulate repeat accumulate codes

    NASA Technical Reports Server (NTRS)

    Abbasfar, Aliazam; Divsalar, Dariush; Yao, Kung

    2004-01-01

    In this paper we propose an innovative channel coding scheme called 'Accumulate Repeat Accumulate codes' (ARA). This class of codes can be viewed as serial turbo-like codes, or as a subclass of Low Density Parity Check (LDPC) codes, thus belief propagation can be used for iterative decoding of ARA codes on a graph. The structure of encoder for this class can be viewed as precoded Repeat Accumulate (RA) code or as precoded Irregular Repeat Accumulate (IRA) code, where simply an accumulator is chosen as a precoder. Thus ARA codes have simple, and very fast encoder structure when they representing LDPC codes. Based on density evolution for LDPC codes through some examples for ARA codes, we show that for maximum variable node degree 5 a minimum bit SNR as low as 0.08 dB from channel capacity for rate 1/2 can be achieved as the block size goes to infinity. Thus based on fixed low maximum variable node degree, its threshold outperforms not only the RA and IRA codes but also the best known LDPC codes with the dame maximum node degree. Furthermore by puncturing the accumulators any desired high rate codes close to code rate 1 can be obtained with thresholds that stay close to the channel capacity thresholds uniformly. Iterative decoding simulation results are provided. The ARA codes also have projected graph or protograph representation that allows for high speed decoder implementation.

  18. Evaluation of factors influencing accumulation of stable Sr and Cs in lake and coastal fish.

    PubMed

    Konovalenko, L; Bradshaw, C; Andersson, E; Lindqvist, D; Kautsky, U

    2016-08-01

    As a result of nuclear accidents and weapons tests, the radionuclides Cs-137 and Sr-90 are common contaminants in aquatic ecosystems. Concentration ratios (CR) based on concentrations of stable Cs and Sr in biota and media are used for the estimation of transfer of their radioisotopes for radiation dose calculations in environmental and human safety assessments. Available element-specific CRs vary by over an order of magnitude for similar organisms, thus affecting the dose estimates proportionally. The variation could be reduced if they were based on a better understanding of the influence of the underlying data and how that affects accumulation and potential biomagnification of stable Cs and Sr in aquatic organisms. For fish, relationships have been identified between water concentrations of K and CR of Cs-137, and between water concentrations of Ca and CR of Sr-90. This has not been confirmed for stable Cs and Sr in European waters. In this study, we analysed an existing dataset for stable Cs and Sr, as well as K and Ca, in four Swedish lakes and three Baltic Sea coastal areas, in order to understand the behaviour of these elements and their radioisotopes in these ecosystems. We found significant seasonal variations in the water concentrations of Cs, Sr, K and Ca, and in electrical conductivity (EC), especially in the lakes. CR values based on measurements taken at single or few time points may, therefore, be inaccurate or introduce unnecessarily large variation into risk assessments. Instead, we recommend incorporating information about the underlying variation in water concentrations into the CR calculations, for example by using the variation of the mean. The inverse relationships between fish CR(Cs)-[K]water and fish CR(Sr)-[Ca]water, confirmed that stable Cs and Sr follow the same trends as their radioisotopes. Thus, they can be used as proxies when radioisotope data are lacking. EC was also strongly correlated with K and Ca concentrations in the water and

  19. Factors influencing legacy pollutant accumulation in alpine osprey: biology, topography, or melting glaciers?

    PubMed

    Elliott, John E; Levac, Joshua; Guigueno, Mélanie F; Shaw, D Patrick; Wayland, Mark; Morrissey, Christy A; Muir, Derek C G; Elliott, Kyle H

    2012-09-04

    Persistent organic pollutants (POPs) can be transported long distances and deposited into alpine environments via cold trapping and snow scavenging processes. Here we examined biotic and abiotic factors determining contaminant variability of wildlife in alpine ecosystems. We measured POPs in eggs and plasma of an apex predator, the osprey (Pandion haliaetus) breeding in 15 mountainous watersheds across a broad latitudinal, longitudinal and altitudinal range in western Canada. After accounting for proximate biotic factors such as trophic level (δ(15)N) and carbon source (δ(13)C), variability in contaminant concentrations, including ΣDDT (sum of trichlorodiphenylethane-related compounds), toxaphene, hexachlorobenzene (HCB), total chlordane, and ΣPCBs (polychlorinated biphenyls) in osprey tissues was explained by interactions among relative size of watersheds, water bodies, elevation, and glacial input. ΣDDT in nestling plasma, for example, decreased with lake elevation, probably as a result of local past inputs from agricultural or public health usage at lower altitude sites. In contrast, toxaphene, never used as an insecticide in western Canada, increased with elevation and year-round snow and ice cover in both plasma and eggs, indicating long-range atmospheric sources as dominant for toxaphene. Lower chlorinated PCBs in plasma tended to decrease with elevation and ice cover consistent with published data and model outcomes. Temporal trends of POPs in osprey eggs are coincident with some modeled predictions of release from melting glaciers due to climate change. Currently we suggest that contaminants largely are released through annual snowpack melt and deposited in large lower elevation lakes, or some smaller lakes with poor drainage. Our study highlights the importance of understanding how biological processes integrate physical when studying the environmental chemistry of wildlife.

  20. Intra-abdominal fat accumulation is a hypertension risk factor in young adulthood: A cross-sectional study.

    PubMed

    Takeoka, Atsushi; Tayama, Jun; Yamasaki, Hironori; Kobayashi, Masakazu; Ogawa, Sayaka; Saigo, Tatsuo; Kawano, Hiroaki; Abiru, Norio; Hayashida, Masaki; Maeda, Takahiro; Shirabe, Susumu

    2016-11-01

    Accumulation of intra-abdominal fat is related to hypertension. Despite this, a relationship between hypertension and intra-abdominal fat in young adulthood is not clear. In this study, we verify whether intra-abdominal fat accumulation increases a hypertension risk in young adult subjects.In a cross-sectional study, intra-abdominal fat area was measured using a dual bioelectrical impedance analysis instrument in 697 university students (20.3 ± 0.7 years, 425 men). Blood pressure and anthropometric factors were measured. Lifestyle variables including smoking, drinking, physical activity, and eating behavior were assessed with questionnaire. High blood pressure risk (systolic blood pressure ≥130 mm Hg and/or diastolic blood pressure ≥85 mm Hg) with increasing intra-abdominal fat area was evaluated.Participants were divided into 5 groups according to their intra-abdominal fat area (≤24.9, 25-49.9, 50-74.9, 75-99.9, and ≥100 cm). As compared with the values of the smallest intra-abdominal fat area group, the crude and lifestyle-adjusted odds ratios (ORs) were elevated in larger intra-abdominal fat area groups [OR 1.31, 95% confidence interval (CI) 0.66-2.80; OR 3.38, 95% CI 1.60-7.57; OR 7.71, 95% CI 2.75-22.22; OR 18.74, 95% CI 3.93-105.64, respectively). The risk increase was observed only in men.Intra-abdominal fat accumulation is related to high blood pressure in men around 20 years of age. These results indicate the importance of evaluation and reduction of intra-abdominal fat to prevent hypertension.

  1. Factors associated with determination of root ²²Na (+) influx in the salt accumulation halophyte Suaeda maritima.

    PubMed

    Zhang, Jin-Lin; Wetson, Anne M; Wang, Suo-Min; Gurmani, Ali R; Bao, Ai-Ke; Wang, Chun-Mei

    2011-01-01

    Salinity is an increasing problem for agricultural production worldwide. The result of low-affinity Na(+) uptake is toxic to the cytoplasm of most crop plants. Nevertheless, the pathways for this low-affinity Na(+) uptake are still uncertain. In this work we used ²²Na(+) isotope tracing technology to investigate factors associated with determination of root ²²Na(+) influx in the salt accumulation halophyte Suaeda maritima. We found that a 2 min of exposure to the ²²Na(+) labeled uptake solution was optimal for determining ²²Na(+) influx into excised roots of S. maritima and that 7 min of blotting is suitable in ²²Na(+) influx experiments. ²²Na(+) influx did not increase linearly with the increasing external Na(+) concentration, in the range tested, of 2 to 300 mM NaCl. But root ²²Na(+) influx and root Na(+) concentration were well correlated. ²²Na(+) influx into excised roots of S. maritima was not, however, well correlated with the plant size. All the above results indicated further that this ²²Na(+) isotope influx procedure is a good method for quantify Na(+) uptake rate by the roots of the salt accumulation halophyte.

  2. Expression of nerve growth factor (NGF) isoforms in the rat uterus during pregnancy: accumulation of precursor proNGF.

    PubMed

    Lobos, Edgar; Gebhardt, Claudia; Kluge, Annett; Spanel-Borowski, Katharina

    2005-04-01

    The mechanisms that promote the transient degenerative changes in the uterus innervation during pregnancy remain incompletely understood. Signaling by the nerve growth factor (NGF)-beta is important for maintaining the density of peripheral sympathetic innervation. Here, we analyzed the spatial and temporal expression of NGF isoforms in the rat uterus using RT-PCR, immunoblot analysis, and immunohistochemistry during pregnancy (d 7, 14, and 21), and postpartum (d 1, 8, and 22). Western blot analysis using antibodies to mature NGF-beta and to proNGF domain demonstrated a significant decrease in mature NGF-beta at gestational d 14 and 21 (term pregnancy) and 1 d postpartum, which paralleled a remarkable accumulation of the 26-28-, 32-, and 60-kDa proNGF forms. There were diminished ratios of mature NGF-beta to proNGF independent of uterus growth on the same gestational days. Immunohistochemistry revealed a progressive NGF-beta decline throughout pregnancy in the myometrium and a near absence at term pregnancy, which contrasted with increased NGF immunostaining in the intermyometrial connective tissue layers. More importantly, proNGF-specific antibodies identified the increased NGF immunoreactivity in the intermyometrial layers at term pregnancy as proNGF and not mature NGF-beta. Alterations in the processing of NGF and accumulation of proNGF in the intermyometrial layers, where axonal degeneration occurs, may contribute significantly to the pregnancy-related uterine denervation and to the control of myometrial activity.

  3. Determining factors for cryoprotectant accumulation in the freeze-tolerant earthworm, Dendrobaena octaedra.

    PubMed

    Overgaard, Johannes; Slotsbo, Stine; Holmstrup, Martin; Bayley, Mark

    2007-10-01

    The freeze-tolerant earthworm Dendrobaena octaedra is found in most of the European forest and tundra, Siberia, North America and Greenland where it over-winters in the top soil and encounters winter frost. In response to freezing this earthworm rapidly synthesises glucose which acts as a cryoprotectant. Frost tolerance varies extensively between geographical populations, and of the populations studied so far, the Finnish worms are most and the Danish worms least frost tolerant. Little is known about the determining factors for glucose synthesis and this study therefore investigated possible roles of acclimation and the cues for synthesis of glucose, in Finnish and Danish worms. The Finnish population had significantly larger glycogen reserves than the Danish during acclimation and in all worms, glucose synthesis was the result of an almost stoichemical reduction in glycogen stores. Maximum glucose levels were reached after the onset of freezing and were significantly higher in Finnish worms where the sugar accounted for as much as 5% of the fresh weight. On average, both the total glycogen phosphorylase activity and the active enzyme pool increased during acclimation in the Finnish but not the Danish populations. However, the increase in this enzyme was only significant during the freezing process. In this study, we show contrary to previous theory that glucose synthesis is initiated before the onset of freezing and that in this species, cryoprotectant synthesis is sensitive to very small temperature changes below 0 degrees C without the presence of ice.

  4. A(1) and A(3) adenosine receptors inhibit LPS-induced hypoxia-inducible factor-1 accumulation in murine astrocytes.

    PubMed

    Gessi, Stefania; Merighi, Stefania; Stefanelli, Angela; Fazzi, Debora; Varani, Katia; Borea, Pier Andrea

    2013-10-01

    Adenosine (Ado) exerts neuroprotective and anti-inflammatory functions by acting through four receptor subtypes A1, A2A, A2B and A3. Astrocytes are one of its targets in the central nervous system. Hypoxia-inducible factor-1 (HIF-1), a master regulator of oxygen homeostasis, is induced after hypoxia, ischemia and inflammation and plays an important role in brain injury. HIF-1 is expressed by astrocytes, however the regulatory role played by Ado on HIF-1α modulation induced by inflammatory and hypoxic conditions has not been investigated. Primary murine astrocytes were activated with lipopolysaccharide (LPS) with or without Ado, Ado receptor agonists, antagonists and receptor silencing, before exposure to normoxia or hypoxia. HIF-1α accumulation and downstream genes regulation were determined. Ado inhibited LPS-increased HIF-1α accumulation under both normoxic and hypoxic conditions, through activation of A1 and A3 receptors. In cells incubated with the blockers of p44/42 MAPK and Akt, LPS-induced HIF-1α accumulation was significantly decreased in normoxia and hypoxia, suggesting the involvement of p44/42 MAPK and Akt in this effect and Ado inhibited kinases phosphorylation. A series of angiogenesis and metabolism related genes were modulated by hypoxia in an HIF-1 dependent way, but not further increased by LPS, with the exception of GLUT-1 and hexochinase II that were elevated by LPS only in normoxia and inhibited by Ado receptors. Instead, genes involved in inflammation, like inducible nitric-oxide synthase (iNOS) and A2B receptors, were increased by LPS in normoxia, strongly stimulated by LPS in concert with hypoxia and inhibited by Ado, through A1 and A3 receptor subtypes. In conclusion A1 and A3 receptors reduce the LPS-mediated HIF-1α accumulation in murine astrocytes, resulting in a downregulation of genes involved in inflammation and hypoxic injury, like iNOS and A2B receptors, in both normoxic and hypoxic conditions.

  5. Factors determining accumulation of mycotoxin producers in cereal grain during harvesting.

    PubMed

    Lugauskas, Albinas; Raila, Algirdas; Zvicevicius, Egidijus; Railiene, Marija; Novosinskas, Henrikas

    2007-01-01

    During the meteorologically contrasting period of 2003-2005, the contamination of winter wheat, malt barley and fodder barley grain with micromycetes during grain harvesting and preparation for storage was investigated. Micromycetes of over 70 species ascribed to 16 genera were isolated and identified, the density of their populations in grain was determined. Micromycetes with a population density of >50% were attributed to dominant species. Short biological characteristic, ecological peculiarities of the dominating micromycetes are provided; factors determining intensity of their development and abilities to synthesise and excrete toxic metabolites are indicated. The importance of grain drying for stabilisation of its contamination with micromycete propagules is highlighted. It is noted that in grain dried in shaft dryer using air at 90 degrees C the number of cfu (colony forming units) was reduced from 2.2 to 8.2 times. When active ventilation is applied, conditions favourable for the development of micromycetes remain longest in the upper layers of the mound. The airflow passing through the layer of damp grain inhibits the development of micromycetes, but an increase of comparative air flow for more than 500 m3x(txh)(-1) did not reduce the abundance of micromycete cfu. After drying Alternaria alternata, Fusarium avenaceum, F. culmorum, Penicillum verrucosum dominated in wheat grain; Aspergillus flavus, Bipolaris sorokiniana, Fusarium chlamydosporum, F. culmorum, F. tricinctum in malts barley grain; Fusarium avenaceum, F. culmorum, F. tricinctum, Alternaria alternata in fodder barley grain. It has been determined that all micromycetes recorded on grain after drying are potential producers of toxic metabolites, i.e. are hazardous to human health.

  6. Abiotic factors influencing biomass accumulation of green tide causing Ulva spp. on Pyropia culture rafts in the Yellow Sea, China.

    PubMed

    Keesing, John K; Liu, Dongyan; Shi, Yajun; Wang, Yujue

    2016-04-15

    Annually recurrent green-tides in the Yellow Sea have been shown to result from direct disposal into the sea of fouling Ulva from Pyropia aquaculture. The role abiotic factors play in Ulva biomass accumulation on rafts was studied to find ways to mitigate this problem. Dissolved inorganic nitrogen (DIN) was very high at all sites, but the highest Ulva biomass was associated with the lowest DIN and anthropogenic N. Under luxuriant background nutrient conditions, variability in temperature and periods of emersion, rather than pH, light and salinity determined Ulva biomass. Two dominant species of Ulva displayed differing tolerances to temperature and desiccation which helped explain why Ulva prolifera dominates floating green-tides. Rather than trying to mitigate green-tides only by reducing nutrient pollution, an earlier harvest of Pyropia in southern Jiangsu Province especially before temperatures increase greatly above 10°C during April, could reduce the biomass of U. prolifera disposed from rafts.

  7. Persistent organochlorines in 13 shark species from offshore and coastal waters of Korea: Species-specific accumulation and contributing factors.

    PubMed

    Lee, Hyun-Kyung; Jeong, Yunsun; Lee, Sunggyu; Jeong, Woochang; Choy, Eun-Jung; Kang, Chang-Keun; Lee, Won-Chan; Kim, Sang-Jo; Moon, Hyo-Bang

    2015-05-01

    Data on persistent organochlorines (OCs) in sharks are scarce. Concentrations of OCs such as polychlorinated biphenyls (PCBs) and organochlorine pesticides (OCPs) were determined in the muscle tissue of 13 shark species (n=105) collected from offshore (Indian and Pacific Oceans) and coastal waters of Korea, to investigate species-specific accumulation of OCs and to assess the potential health risks associated with consumption of shark meat. Overall OC concentrations were highly variable not only among species but also within the same species of shark. The concentrations of PCBs, DDTs, chlordanes, hexachlorobenzene, and heptachlor in all shark species ranged from accumulation profiles of OCs among shark species could be explained by differences in feeding habit and sampling locations. Several confounding factors such as growth velocity, trophic position, and regional contamination status may affect the bioaccumulation of OCs in sharks. Hazard ratios of non-cancer risk for all the OCs were below one, whereas the hazard ratios of lifetime cancer risks of PCBs and DDTs exceeded one, implying potential carcinogenic effects in the general population in Korea. This is the first report to document the occurrence of OCs in sharks from Korea.

  8. Multiple R2R3-MYB Transcription Factors Involved in the Regulation of Anthocyanin Accumulation in Peach Flower

    PubMed Central

    Zhou, Hui; Peng, Qian; Zhao, Jianbo; Owiti, Albert; Ren, Fei; Liao, Liao; Wang, Lu; Deng, Xianbao; Jiang, Quan; Han, Yuepeng

    2016-01-01

    Anthocyanin accumulation is responsible for flower coloration in peach. Here, we report the identification and functional characterization of eight flavonoid-related R2R3-MYB transcription factors, designated PpMYB10.2, PpMYB9, PpMYBPA1, Peace, PpMYB17, PpMYB18, PpMYB19, and PpMYB20, respectively, in peach flower transcriptome. PpMYB10.2 and PpMYB9 are able to activate transcription of anthocyanin biosynthetic genes, whilst PpMYBPA1 and Peace have a strong activation on the promoters of proanthocyanin (PA) biosynthetic genes. PpMYB17-20 show a strong repressive effect on transcription of flavonoid pathway genes such as dihydroflavonol 4-reductase. These results indicate that anthocyanin accumulation in peach flower is coordinately regulated by a set of R2R3-MYB genes. In addition, PpMYB9 and PpMYB10.2 are closely related but separated into two groups, designated MYB9 and MYB10, respectively. PpMYB9 shows a strong activation on the PpUGT78A2 promoter, but with no effect on the promoter of PpUGT78B (commonly called PpUFGT in previous studies). In contrast, PpMYB10.2 is able to activate the PpUFGT promoter, but not for the PpUGT78A2 promoter. Unlike the MYB10 gene that is universally present in plants, the MYB9 gene is lost in most dicot species. Therefore, the PpMYB9 gene represents a novel group of anthocyanin-related MYB activators, which may have diverged in function from the MYB10 genes. Our study will aid in understanding the complex mechanism regulating floral pigmentation in peach and functional divergence of the R2R3-MYB gene family in plants. PMID:27818667

  9. Accumulation of Extracellular Matrix and Developmental Dysregulation in the Pancreas by Transgenic Production of Transforming Growth Factor-β1

    PubMed Central

    Lee, Myung-Shik; Gu, Danling; Feng, Lili; Curriden, Scott; Arnush, Marc; Krahl, Troy; Gurushanthaiah, Deepak; Wilson, Curtis; Loskutoff, David L.; Fox, Howard; Sarvetnick, Nora

    1995-01-01

    Transgenic mice expressing transforming growth factor-β1 (TGF-β1) in the pancreatic β-islet cells directed by human insulin promoter were produced to study in vivo effects of TGF-β1. Fibroblast proliferation and abnormal deposition of extracellular matrix were observed from birth onward, finally replacing almost all the exocrine pancreas. Cellular infiltrates comprising macrophages and neutrophils were also observed. Plasminogen activator inhibitor was induced in the transgenic pancreas as well as fibronectin and laminin, partly explaining accumulation of extracellular matrix. TGF-β1 inhibited proliferation of acinar cells in vivo as evidenced by decreased bromodeoxyuridine incorporation. Development of pancreatic islets was dysregulated, resulting in small islet cell clusters without formation of normal adult islets; however, the overall islet cell mass was not signfifcantly diminished. Additional transgenic lines with less pronounced phenotypes had less expression of TGF-β1 transgene. These findings suggest that TGF-β1 might be a mediator of diseases associated with extracellular matrix deposition such as chronic pancreatitis, and this mouse model will be useful for further analysis of the in vivo effects of TGF-β1, including its potential for immunosuppression. Imagesp43-aFigure 2Figure 3Figure 4Figure 5Figure 6 PMID:7604884

  10. MADS-box transcription factor OsMADS25 regulates root development through affection of nitrate accumulation in rice.

    PubMed

    Yu, Chunyan; Liu, Yihua; Zhang, Aidong; Su, Sha; Yan, An; Huang, Linli; Ali, Imran; Liu, Yu; Forde, Brian G; Gan, Yinbo

    2015-01-01

    MADS-box transcription factors are vital regulators participating in plant growth and development process and the functions of most of them are still unknown. ANR1 was reported to play a key role in controlling lateral root development through nitrate signal in Arabidopsis. OsMADS25 is one of five ANR1-like genes in Oryza Sativa and belongs to the ANR1 clade. Here we have investigated the role of OsMADS25 in the plant's responses to external nitrate in Oryza Sativa. Our results showed that OsMADS25 protein was found in the nucleus as well as in the cytoplasm. Over-expression of OsMADS25 significantly promoted lateral and primary root growth as well as shoot growth in a nitrate-dependent manner in Arabidopsis. OsMADS25 overexpression in transgenic rice resulted in significantly increased primary root length, lateral root number, lateral root length and shoot fresh weight in the presence of nitrate. Down-regulation of OsMADS25 in transgenic rice exhibited significantly reduced shoot and root growth in the presence of nitrate. Furthermore, over-expression of OsMADS25 in transgenic rice promoted nitrate accumulation and significantly increased the expressions of nitrate transporter genes at high rates of nitrate supply while down-regulation of OsMADS25 produced the opposite effect. Taken together, our findings suggest that OsMADS25 is a positive regulator control lateral and primary root development in rice.

  11. The p150N domain of chromatin assembly factor-1 regulates Ki-67 accumulation on the mitotic perichromosomal layer

    PubMed Central

    Matheson, Timothy D.; Kaufman, Paul D.

    2017-01-01

    Chromatin assembly factor 1 (CAF-1) deposits histones during DNA synthesis. The p150 subunit of human CAF-1 contains an N-terminal domain (p150N) that is dispensable for histone deposition but promotes the localization of specific loci (nucleolar-associated domains [NADs]) and proteins to the nucleolus during interphase. One of the p150N-regulated proteins is proliferation antigen Ki-67, whose depletion also decreases the nucleolar association of NADs. Ki-67 is also a fundamental component of the perichromosomal layer (PCL), a sheath of proteins surrounding condensed chromosomes during mitosis. We show here that a subset of p150 localizes to the PCL during mitosis and that p150N is required for normal levels of Ki-67 accumulation on the PCL. This activity requires the sumoylation-interacting motif within p150N, which is also required for the nucleolar localization of NADs and Ki-67 during interphase. In this manner, p150N coordinates both interphase and mitotic nuclear structures via Ki67. PMID:27807046

  12. Chronic systemic treatment with epidermal growth factor in pigs causes pronounced urothelial growth with accumulation of glycoconjugates.

    PubMed Central

    Vinter-Jensen, L.; Juhl, C. O.; Djurhuus, J. C.; Poulsen, S. S.; Dajani, E. Z.; Brown, K. D.; Orntoft, T. F.; Teglbjaerg, P. S.; Nexø, E.

    1995-01-01

    Epidermal growth factor (EGF) is present in large amounts in the urine, but the effects of systemically administered EGF on the urinary tract have not been described previously. In the present paper, we describe a potent growth induction of EGF on the urinary tract. Goettingen minipigs were treated with solvent (n = 5), EGF 30 micrograms/kg/day (n = 6) for 4 weeks, or EGF 30 micrograms/kg/day for 5 weeks followed by 3 weeks of recovery (n = 5). The ureters and bladders were examined by routine histology and electron microscopy and were immunostained for proliferating cell nuclear antigen. Four weeks of EGF treatment increased the median cross sectional area of the ureter fourfold with growth of all wall layers. The urothelium was widened from 5 cell layers in the controls to 10 in the EGF-treated animals. Proliferating cell nuclear antigen immunostaining revealed an increased mitotic activity in the basal zone of the urothelium. In the luminal zone, glycoconjugates accumulated in goblet cells, in cells with intracytoplasmic lumina, and beneath the luminal cell membrane in the umbrella cells. Our studies present a new experimental approach to growth induction of the urinary tract. The findings implicate the EGF system in regulating urothelial growth and glycoconjugate biosynthesis. Images Figure 1 Figure 2 Figure 3 Figure 4 Figure 5 Figure 6 PMID:7485396

  13. Regional accumulation characteristics of cadmium in vegetables: Influencing factors, transfer model and indication of soil threshold content.

    PubMed

    Yang, Yang; Chen, Weiping; Wang, Meie; Peng, Chi

    2016-12-01

    A regional investigation in the Youxian prefecture, southern China, was conducted to analyze the impact of environmental factors including soil properties and irrigation in conjunction with the use of fertilizers on the accumulation of Cd in vegetables. The Cd transfer potential from soil to vegetable was provided by the plant uptake factor (PUF), which varied by three orders of magnitude and was described by a Gaussian distribution model. The soil pH, content of soil organic matter (SOM), concentrations of Zn in the soil, pH of irrigation water and nitrogenous fertilizers contributed significantly to the PUF variations. A path model analysis, however, revealed the principal control of the PUF values resulted from the soil pH, soil Zn concentrations and SOM. Transfer functions were developed using the total soil Cd concentrations, soil pH, and SOM. They explained 56% of the variance for all samples irrespective of the vegetable genotypes. The transfer functions predicted the probability of exceeding China food safety standard concentrations for Cd in four major consumable vegetables under different soil conditions. Poor production practices in the study area involved usage of soil with pH values ≤ 5.5, especially for the cultivation of Raphanus sativus L., even with soil Cd concentrations below the China soil quality standard. We found the soil standard Cd concentrations for cultivating vegetables was not strict enough for strongly acidic (pH ≤ 5.5) and SOM-poor (SOM ≤ 10 g kg(-1)) soils present in southern China. It is thus necessary to address the effect of environmental variables to generate a suitable Cd threshold for cultivated soils.

  14. The master transcription factor Spo0A is required for poly(3-hydroxybutyrate) (PHB) accumulation and expression of genes involved in PHB biosynthesis in Bacillus thuringiensis.

    PubMed

    Chen, Hui-Ju; Tsai, Teng-Kuan; Pan, Shih-Chuan; Lin, Jer-Sheng; Tseng, Chi-Ling; Shaw, Gwo-Chyuan

    2010-03-01

    Bacillus thuringiensis is a gram-positive spore-forming bacterium that can accumulate poly(3-hydroxybutyrate) (PHB) as a carbon and energy storage substance in response to nutritional stress. The regulatory mechanism for PHB biosynthesis in B. thuringiensis and diverse Bacillus species is still poorly understood. We now report that disruption of the sigH gene or the gene encoding the master sporulation transcription factor Spo0A severely impaired PHB accumulation in B. thuringiensis. Complementation of the spo0A mutation with the spo0A gene restored PHB accumulation. We have found that the requirement of Spo0A for PHB accumulation is independent of the transition state regulator AbrB and of loss of sporulation ability. We also show that Spo0A is required for the expression of three genes involved in PHB biosynthesis. These findings have uncovered a new role of Spo0A in the regulation of stationary-phase-associated cellular events.

  15. Accumulate-Repeat-Accumulate-Accumulate-Codes

    NASA Technical Reports Server (NTRS)

    Divsalar, Dariush; Dolinar, Sam; Thorpe, Jeremy

    2004-01-01

    Inspired by recently proposed Accumulate-Repeat-Accumulate (ARA) codes [15], in this paper we propose a channel coding scheme called Accumulate-Repeat-Accumulate-Accumulate (ARAA) codes. These codes can be seen as serial turbo-like codes or as a subclass of Low Density Parity Check (LDPC) codes, and they have a projected graph or protograph representation; this allows for a high-speed iterative decoder implementation using belief propagation. An ARAA code can be viewed as a precoded Repeat-and-Accumulate (RA) code with puncturing in concatenation with another accumulator, where simply an accumulator is chosen as the precoder; thus ARAA codes have a very fast encoder structure. Using density evolution on their associated protographs, we find examples of rate-lJ2 ARAA codes with maximum variable node degree 4 for which a minimum bit-SNR as low as 0.21 dB from the channel capacity limit can be achieved as the block size goes to infinity. Such a low threshold cannot be achieved by RA or Irregular RA (IRA) or unstructured irregular LDPC codes with the same constraint on the maximum variable node degree. Furthermore by puncturing the accumulators we can construct families of higher rate ARAA codes with thresholds that stay close to their respective channel capacity thresholds uniformly. Iterative decoding simulation results show comparable performance with the best-known LDPC codes but with very low error floor even at moderate block sizes.

  16. Factors Contributing to the Accumulation of Primary Teacher's Debts to the Government of Tanzania: A Case Study for Dar Es Salaam Region

    ERIC Educational Resources Information Center

    Kombo, Ibun

    2015-01-01

    This paper presents the findings of the study which was conducted to determine factors contributing to the accumulation of primary school teacher's debts to the Government of Tanzania, a case study of Dar es Salaam Region in its three municipalities namely, Ilala, Kinondoni and Temeke. Data was obtained through sampling method which also helped to…

  17. Evaluation of field-generated accumulation factors for predicting the bioaccumulation potential of sediment-associated PAH compounds. Final report

    SciTech Connect

    McFarland, V.A.

    1995-07-01

    Equilibrium partitioning of neutral organic chemicals between the organic carbon fraction of bedded sediments and the lipids of resident organisms provides the theoretical basis for one of the most popular approaches to the development of sediment quality criteria (SQC) by the U.S. Environmental Protection Agency (EPA). The proposed equilibrium partitioning-based SQC seek to relate estimated doses of sediment-associated chemicals to toxicity in exposed biota. Criteria documents for several polynuclear aromatic hydrocarbon (PAH) compounds, endrin, and dieldrin have been released by the EPA for public review, and may soon be promulgated. A procedure recommended in the Implementation Manual (the Green Book) for public law regulating ocean disposal of dredged sediments (Section 103, Public Law 92-532, Marine Protection, Research, and Sanctuaries Act, the Ocean Dumping Act) has used equilibrium partitioning-based estimations to screen sediments for bioaccumulation potential for several years. The screening test, termed theoretical bioaccumulation potential, TBP, is also included in the draft manual for inland waters to implement dredged material testing requirements of the Clean Water Act. TBP employs an accumulation factor (AF), defined as the ratio at equilibrium of the organic carbon-normalized concentration of a neutral organic chemical in a sediment and the lipid-normalized concentration of the chemical in an exposed organism. The Green Book currently recommends using a universal AF =4 for all neutral chemicals, the rationale being that this value is suitably protective of all neutral chemicals, provided certain caveats are recognized. This study compared the predictive capability of PAH AFs derived from field data with that of the universal AF=4 in making TBP estimations.

  18. Copper and cobalt mobility in soil and accumulation in a metallophyte as influenced by experimental manipulation of soil chemical factors.

    PubMed

    Lange, Bastien; Pourret, Olivier; Meerts, Pierre; Jitaru, Petru; Cancès, Benjamin; Grison, Claude; Faucon, Michel-Pierre

    2016-03-01

    The influence of Fe oxides, Mn oxides and organic matter (OM) on the Cu and Co mobility in soil and accumulation in the metallophyte Anisopappus chinensis (Ac), as compared with Helianthus annuus (Ha), was experimentally investigated. Growth and accumulation response when increasing the exchangeable Cu and Co concentrations in soil were also investigated. Plants were cultivated on soil where concentrations of Cu, Co, Fe oxides, Mn oxides and OM content were varied according to 36 treatments. The OM supply decreased the Cu mobility and increased the Co mobility, resulting in decreasing the foliar Cu of Ac and increasing the foliar Co of Ha. The Fe oxides supply could increase the Cu accumulation for Ac, but was not verified for Ha. Compared with Ha, Ac increasingly accumulated Cu and Co without negative effect on plant growth while increasing Cu and Co mobility to phytotoxic concentrations. The results revealed promising perspectives for the use of Ac in Cu-contaminated environment phytoremediation applications.

  19. Accumulate-Repeat-Accumulate-Accumulate Codes

    NASA Technical Reports Server (NTRS)

    Divsalar, Dariush; Dolinar, Samuel; Thorpe, Jeremy

    2007-01-01

    Accumulate-repeat-accumulate-accumulate (ARAA) codes have been proposed, inspired by the recently proposed accumulate-repeat-accumulate (ARA) codes. These are error-correcting codes suitable for use in a variety of wireless data-communication systems that include noisy channels. ARAA codes can be regarded as serial turbolike codes or as a subclass of low-density parity-check (LDPC) codes, and, like ARA codes they have projected graph or protograph representations; these characteristics make it possible to design high-speed iterative decoders that utilize belief-propagation algorithms. The objective in proposing ARAA codes as a subclass of ARA codes was to enhance the error-floor performance of ARA codes while maintaining simple encoding structures and low maximum variable node degree.

  20. Kinome-Wide Functional Genomics Screen Reveals a Novel Mechanism of TNFα-Induced Nuclear Accumulation of the HIF-1α Transcription Factor in Cancer Cells

    PubMed Central

    Schoolmeesters, Angela; Brown, Daniel D.; Fedorov, Yuriy

    2012-01-01

    Hypoxia-inducible factor-1 (HIF-1) and its most important subunit, HIF-1α, plays a central role in tumor progression by regulating genes involved in cancer cell survival, proliferation and metastasis. HIF-1α activity is associated with nuclear accumulation of the transcription factor and regulated by several mechanisms including modulation of protein stability and degradation. Among recent advances are the discoveries that inflammation-induced cytokines and growth factors affect protein accumulation of HIF-1α under normoxia conditions. TNFα, a major pro-inflammatory cytokine that promotes tumorigenesis is known as a stimulator of HIF-1α activity. To improve our understanding of TNFα-mediated regulation of HIF-1α nuclear accumulation we screened a kinase-specific siRNA library using a cell imaging–based HIF-1α-eGFP chimera reporter assay. Interestingly, this systematic analysis determined that depletion of kinases involved in conventional TNFα signaling (IKK/NFκB and JNK pathways) has no detrimental effect on HIF-1α accumulation. On the other hand, depletion of PRKAR2B, ADCK2, TRPM7, and TRIB2 significantly decreases the effect of TNFα on HIF-1α stability in osteosarcoma and prostate cancer cell lines. These newly discovered regulators conveyed their activity through a non-conventional RELB-depended NFκB signaling pathway and regulation of superoxide activity. Taken together our data allow us to conclude that TNFα uses a distinct and complex signaling mechanism to induce accumulation of HIF-1α in cancer cells. In summary, our results illuminate a novel mechanism through which cancer initiation and progression may be promoted by inflammatory cytokines, highlighting new potential avenues for fighting this disease. PMID:22355351

  1. Traffic-related heavy metals uptake by wild plants grow along two main highways in Hunan Province, China: effects of soil factors, accumulation ability, and biological indication potential.

    PubMed

    Zhai, Yunbo; Dai, Qingyun; Jiang, Kang; Zhu, Yun; Xu, Bibo; Peng, Chuan; Wang, Tengfei; Zeng, Guangming

    2016-07-01

    This study was performed to investigate pollution of traffic-related heavy metals (HMs-Zn, Pb, Cu, Cr, and Cd) in roadside soils and their uptake by wild plants growing along highways in Hunan Province, China. For this, we analyzed the concentration and chemical fractionation of HMs in soils and plants. Soil samples were collected with different depths in the profile and different distances from highway edge. And leaves and barks of six high-frequency plants were collected. Results of the modified European Community Bureau of Reference (BCR) showed that the mobile fraction of these HMs was in the order of Cd > Pb > Zn > Cu > Cr. A high percentage of the mobile fraction indicates Cd, Pb, and Zn were labile and available for uptake by wild plants. The total concentration and values of risk assessment code (RAC) showed that Cd was the main risk factor, which were in the range high to very high risk. The accumulation ability of HMs in plants was evaluated by the biological accumulation factor (BAF) and the metal accumulation index (MAI), and the results showed that all those plant species have good phyto-extraction ability, while accumulation capacity for most HMs plants tissues was bark > leaf. The highest MAI value (5.99) in Cinnamomum camphora (L) Presl indicates the potential for bio-monitoring and a good choice for planting along highways where there is contamination with HMs.

  2. An eukaryotic translation initiation factor, AteIF5A-2, affects cadmium accumulation and sensitivity in Arabidopsis.

    PubMed

    Xu, Xiao-Yan; Ding, Zhong-Jie; Chen, Lei; Yan, Jin-Ying; Li, Gui-Xin; Zheng, Shao-Jian

    2015-10-01

    Cadmium (Cd) is one of the most toxic elements and can be accumulated in plants easily; meanwhile, eIF5A is a highly conserved protein in all eukaryotic organisms. The present work tried to investigate whether eIF5A is involved in Cd accumulation and sensitivity in Arabidopsis (Arabidopsis thaliana L.) by comparing the wild-type Columbia-0 (Col-0) with a knockdown mutant of AteIF5A-2, fbr12-3 under Cd stress conditions. The results showed that the mutant fbr12-3 accumulated more Cd in roots and shoots and had significantly lower chlorophyll content, shorter root length, and smaller biomass, suggesting that downregulation of AteIF5A-2 makes the mutant more Cd sensitive. Real-time polymerase chain reaction revealed that the expressions of metal transporters involved in Cd uptake and translocation including IRT1, ZIP1, AtNramp3, and AtHMA4 were significantly increased but the expressions of PCS1 and PCS2 related to Cd detoxification were decreased notably in fbr12-3 compared with Col-0. As a result, an increase in MDA and H2 O2 content but decrease in root trolox, glutathione and proline content under Cd stress was observed, indicating that a severer oxidative stress occurs in the mutant. All these results demonstrated for the first time that AteIF5A influences Cd sensitivity by affecting Cd uptake, accumulation, and detoxification in Arabidopsis.

  3. Investigation of factors affecting the accumulation of vinyl chloride in polyvinyl chloride piping used in drinking water distribution systems.

    PubMed

    Walter, Ryan K; Lin, Po-Hsun; Edwards, Marc; Richardson, Ruth E

    2011-04-01

    Plastic piping made of polyvinyl chloride (PVC), and chlorinated PVC (CPVC), is being increasingly used for drinking water distribution lines. Given the formulation of the material from vinyl chloride (VC), there has been concern that the VC (a confirmed human carcinogen) can leach from the plastic piping into drinking water. PVC/CPVC pipe reactors in the laboratory and tap samples collected from consumers homes (n = 15) revealed vinyl chloride accumulation in the tens of ng/L range after a few days and hundreds of ng/L after two years. While these levels did not exceed the EPA's maximum contaminant level (MCL) of 2 μg/L, many readings that simulated stagnation times in homes (overnight) exceeded the MCL-Goal of 0 μg/L. Considerable differences in VC levels were seen across different manufacturers, while aging and biofilm effects were generally small. Preliminary evidence suggests that VC may accumulate not only via chemical leaching from the plastic piping, but also as a disinfection byproduct (DBP) via a chlorine-dependent reaction. This is supported from studies with CPVC pipe reactors where chlorinated reactors accumulated more VC than dechlorinated reactors, copper pipe reactors that accumulated VC in chlorinated reactors and not in dechlorinated reactors, and field samples where VC levels were the same before and after flushing the lines where PVC/CPVC fittings were contributing. Free chlorine residual tests suggest that VC may be formed as a secondary, rather than primary, DBP. Further research and additional studies need to be conducted in order to elucidate reaction mechanisms and tease apart relative contributions of VC accumulation from PVC/CPVC piping and chlorine-dependent reactions.

  4. The Citrus transcription factor, CitERF13, regulates citric acid accumulation via a protein-protein interaction with the vacuolar proton pump, CitVHA-c4

    PubMed Central

    Li, Shao-jia; Yin, Xue-ren; Xie, Xiu-lan; Allan, Andrew C.; Ge, Hang; Shen, Shu-ling; Chen, Kun-song

    2016-01-01

    Organic acids are essential to fruit flavor. The vacuolar H+ transporting adenosine triphosphatase (V-ATPase) plays an important role in organic acid transport and accumulation. However, less is known of V-ATPase interacting proteins and their relationship with organic acid accumulation. The relationship between V-ATPase and citric acid was investigated, using the citrus tangerine varieties ‘Ordinary Ponkan (OPK)’ and an early maturing mutant ‘Zaoshu Ponkan (ZPK)’. Five V-ATPase genes (CitVHA) were predicted as important to citric acid accumulation. Among the genes, CitVHA-c4 was observed, using a yeast two-hybrid screen, to interact at the protein level with an ethylene response factor, CitERF13. This was verified using bimolecular fluorescence complementation assays. A similar interaction was also observed between Arabidopsis AtERF017 (a CitERF13 homolog) and AtVHA-c4 (a CitVHA-c4 homolog). A synergistic effect on citric acid levels was observed between V-ATPase proteins and interacting ERFs when analyzed using transient over-expression in tobacco and Arabidopsis mutants. Furthermore, the transcript abundance of CitERF13 was concomitant with CitVHA-c4. CitERF13 or AtERF017 over-expression leads to significant citric acid accumulation. This accumulation was abolished in an AtVHA-c4 mutant background. ERF-VHA interactions appear to be involved in citric acid accumulation, which was observed in both citrus and Arabidopsis. PMID:26837571

  5. Effect of Enzymatic Adenylylation on Dihydrostreptomycin Accumulation in Escherichia coli Carrying an R-Factor: Model Explaining Aminoglycoside Resistance by Inactivating Mechanisms

    PubMed Central

    Dickie, P.; Bryan, L. E.; Pickard, M. A.

    1978-01-01

    Strains of Escherichia coli carrying R-factor R71(a), which codes for a streptomycin-spectinomycin adenylyltransferase, have elevated levels of resistance to dihydrostreptomycin (DHS) compared with isogenic R− bacteria. DHS accumulated by whole cells and spheroplasts of R+ bacteria is lower than that observed for R− strains, a result of the absence of the second and more rapid of the two energy-dependent phases of DHS uptake seen in susceptible E. coli. A mutant of R+E. coli with reduced DHS resistance has been shown to have reduced levels of streptomycin-spectinomycin adenylyltransferase activity as well as enhanced drug accumulation. Actively accumulated DHS was recovered from R+ cells as the adenylylated derivative. Neither was inactivated antibiotic detected in culture filtrates, nor was actively accumulated drug lost from R+ cells under normal conditions. The cellular distribution of actively accumulated DHS in R+ and R− cells was found to be the same. Membranes isolated from these cells retained only a small fraction (≃1%) of the total cell-associated drug. The R+ derivative of a mutant with defective energy transduction (E. coli NR-70) and reduced ability to transport aminoglycosides has a significantly higher minimal inhibitory concentration of DHS than its R+ parent (strain 7). Streptomycin-spectinomycin adenylyltransferase activity, from comparisons of Km values and total activities of enzyme, was the same in both strains. The enzyme has been localized to the exterior surface of the bacterial inner membrane, although isolated membranes lacked detectable enzyme activity. The preceding observations are consistent with the proposal that the level of R71(a)-mediated DHS resistance is the outcome of competition between the rate of adenylylation and the rate of the first energy-dependent phase of DHS transport. When the rate of adenylylation exceeds the first energy-dependent phase, adenylylated DHS is accumulated, apparently in a manner identical to

  6. Heavy metal accumulation in balsam pear and cowpea related to the geochemical factors of variable-charge soils in the Pearl River Delta, South China.

    PubMed

    Chang, Chun-Ying; Xu, Xiang-Hua; Liu, Chuan-Ping; Li, Shu-Yi; Liao, Xin-Rong; Dong, Jun; Li, Fang-Bai

    2014-07-01

    Variable-charge (v-c) soils in subtropical areas contain considerable amounts of iron/aluminum (Fe/Al) oxides that can strongly influence the fate of heavy metals in agricultural ecosystems. However, the relationship between heavy metal accumulation in vegetables and the geochemical factors associated with v-c soils in subtropical regions remains unknown. The present study investigated heavy metal accumulation under field conditions in the Pearl River Delta (PRD) by measuring the content of 8 heavy metals (zinc (Zn), arsenic (As), copper (Cu), mercury (Hg), lead (Pb), chromium (Cr), nickel (Ni) and cadmium (Cd)) in 43 pairs of v-c soil and vegetable (balsam pear and cowpea) samples. Soil physicochemical properties including pH, texture, organic matter and oxide minerals (Fe2O3, SiO2, Al2O3, CaO, MgO, K2O and Na2O) were also analyzed. Heavy metal accumulation from soil to vegetables was assessed based on bioconcentration factors (BCFs). The results showed that soil extractable Fe, oxide minerals and chemical weathering indices of v-c soils strongly affected heavy metal accumulation, whereas the content of Zn, Cu, Cr and Ni in vegetables was strongly affected by the soil clay content. Significant correlations were found between the BCFs of heavy metals and oxide minerals. However, no significant relationship was found between pH and heavy metal accumulation (except for Cu) in balsam pear and cowpea. Correlation analyses showed that a lower oxalate/DCB- extractable Fe content might indicate greater heavy metal (Zn, Cu, Hg, Cr and Ni) accumulation in vegetables. Therefore, it can be deduced that oxalate/DCB- extractable Fe content is a critical geochemical factor that determines the bioavailability of heavy metals and that iron biogeochemical cycles play vital roles in the fate of heavy metals in vegetable fields in this area. These findings provide new insights into the behaviors and fate of heavy metals in subtropical v-c soils and can be used to develop possible

  7. Effects of pH on the hydrolysis of lignocellulosic wastes and volatile fatty acids accumulation: the contribution of biotic and abiotic factors.

    PubMed

    Chen, Yi; Wen, Yue; Zhou, Junwei; Xu, Chao; Zhou, Qi

    2012-04-01

    In this study, a combination of micro-scale structure and extracellular enzyme activity (EEA) analysis was successfully used to explore the effect of pH (from 6.0 to 12.0) on wetland plant litter (WPL) hydrolysis and VFAs accumulation. During 30days of fermentation, the maximum VFAs production and abiotic release of carbohydrate, combined with the minimum EEAs were observed at pH 12.0, suggesting that abiotic factors were most important for hydrolysis and VFAs accumulation at pH 12.0. As the pH decreased, the factors most important to carbohydrate hydrolysis shifted from abiotic factors to biotic factors with the maximum bio-release of carbohydrate occurring at pH 9.0. Further investigation showed that pH 9.0 could significantly enhance the bio-release of carbohydrate through the increase in the mesoporous surface area, surface cellulose accessibility and cellulase activity. Alkaline fermentation at ambient temperature can be considered as a sustainable technology for VFAs recovery and WPL management.

  8. Spatial and temporal variations and controlling factors of sediment accumulation in the Yangtze River estuary and its adjacent sea area in the Holocene, especially in the Early Holocene

    NASA Astrophysics Data System (ADS)

    Feng, Zhibing; Liu, Baohua; Zhao, Yuexia; Li, Xishuang; Jiang, Li; Si, Shaokun

    2016-08-01

    The sub-bottom and collected borehole data provide insight into the transport and accumulation processes of the Yangtze-derived sediment in the study area since ~11 kyr BP. Five seismic units were identified according to six major acoustic surfaces. The sedimentary strata consist of fluvial, estuarine and deltaic systems from the bottom up, characterized by two different trends in sediment accumulation rates, i.e., low-high-low, and high-low-high. On the inner shelf of the East China Sea, the terrain with trough and ridge was formed by the Early Holocene transgression strata (formed in ~10 to 12 kyr BP) scoured by the later rectilinear tidal current due to postglacial sea-level transgression, and the sharply protruding seismic units are interpreted to be bedrocks outcropping on the seafloor. An analysis of the sedimentary characteristics in the boreholes and such factors as difference in accumulation rates, and tectonic subsidence led us to conclude that the paleo-coastline was located not far away from and to the east of Core ZK09 at ~9 kyr BP, and the southern bank of the Yangtze River estuary was located to the south of Core ZK09. At ~9 kyr BP, the Yangtze-derived sediments were transported eastwards along the southern bank of the Yangtze River and the barrier due to the influence of the paleo-coastal current from the north, the direction of the Yangtze-derived sediment transport was split on the northeast of the Zhoushan archipelago, and the sediments covered the terrain with trough and ridge. During the high sea level period (7 kyr BP-present), the eastward migration of paleo-coastline had resulted in the increase in accumulation rate. We also conclude that the sharp increase in accumulation rate near the Yangtze River estuary after ~2 kyr BP was not primarily caused by human activities. The position shifts of the estuary caused by the paleo-coastline migration and sea level oscillations since the Holocene is the main cause controlling the Yangtze

  9. Heat-induced accumulation of protein synthesis elongation factor 1A indicates an important role in heat tolerance in potato

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Heat stress substantially reduces crop productivity worldwide, and will become more severe due to global warming. Identification of proteins involved in heat stress response may help develop varieties for heat tolerance. Eukaryotic elongation factor 1A (eEF1A) is a cytosolic, multifunctional protei...

  10. Expression of tumour necrosis factor alpha and accumulation of fibronectin in coronary artery restenotic lesions retrieved by atherectomy.

    PubMed Central

    Clausell, N.; de Lima, V. C.; Molossi, S.; Liu, P.; Turley, E.; Gotlieb, A. I.; Adelman, A. G.; Rabinovitch, M.

    1995-01-01

    BACKGROUND--The formation of coronary artery neointima experimentally induced in piglets after cardiac transplantation is related to an immune-inflammatory reaction associated with increased expression of T cells and inflammatory mediators (tumour necrosis factor alpha and interleukin 1 beta) and upregulation of fibronectin. In vivo blockade of tumour necrosis factor alpha in rabbits after cardiac transplantation results in reduced neointimal formation. The objective of this study was to investigate the hypothesis that coronary restenosis after atherectomy or percutaneous balloon angioplasty is associated with a similar inflammatory cascade initiated by mechanical injury. METHODS--Specimens taken at coronary atherectomy were analysed from 16 patients. Nine had had the procedure performed twice, firstly, to remove a primary lesion, and secondly, to remove a restenotic lesion. Seven had percutaneous balloon angioplasty after removal of restenotic tissue. Coronary atherectomy specimens were analysed by immunohistochemistry for the presence of T cells, macrophages, major histocompatibility complex II, interleukin 1 beta, tumour necrosis factor alpha, fibronectin, and the receptor for hyaluronan mediated motility. RESULTS--The groups were clinically and angiographically similar with equivalent lumens before and after atherectomy. Restenotic lesions had increased expression of tumour necrosis factor alpha and fibronectin compared with the primary lesions (P < 0.05 for both). There was also a trend towards a greater number of T cells and increased expression of interleukin 1 beta. CONCLUSIONS--Restenosis is associated with increased expression of tumour necrosis factor alpha and fibronectin, suggesting that an immune-inflammatory reaction probably contributes to neointimal formation and may represent a form of wound healing and repair secondary to mechanical injury. Images PMID:7626352

  11. Anthocyanin Accumulation in Muscadine Berry Skins Is Influenced by the Expression of the MYB Transcription Factors, MybA1, and MYBCS1

    PubMed Central

    Oglesby, Lillian; Ananga, Anthony; Obuya, James; Ochieng, Joel; Cebert, Ernst; Tsolova, Violeta

    2016-01-01

    The skin color of grape berry is very important in the wine industry. The red color results from the synthesis and accumulation of anthocyanins, which is regulated by transcription factors belonging to the MYB family. The transcription factors that activate the anthocyanin biosynthetic genes have been isolated in model plants. However, the genetic basis of color variation is species-specific and its understanding is relevant in many crop species. This study reports the isolation of MybA1, and MYBCS-1 genes from muscadine grapes for the first time. They are designated as VrMybA1 (GenBank Accession No. KJ513437), and VrMYBCS1 (VrMYB5a) (GenBank Accession No. KJ513438). The findings in this study indicate that, the deduced VrMybA1 and VrMYBCS1 protein structures share extensive sequence similarity with previously characterized plant MYBs, while phylogenetic analysis confirms that they are members of the plant MYB super-family. The expressions of MybA1, and MYBCS1 (VrMYB5a) gene sequences were investigated by quantitative real-time PCR using in vitro cell cultures, and berry skin samples at different developmental stages. Results showed that MybA1, and MYBCS1 genes were up-regulated in the veràison and physiologically mature red berry skins during fruit development, as well as in in vitro red cell cultures. This study also found that in ripening berries, the transcription of VrMybA1, and VrMYBCS1 in the berry skin was positively correlated with anthocyanin accumulation. Therefore, the upregulation of VrMybA1, and VrMYBCS1 results in the accumulation and regulation of anthocyanin biosynthesis in berry development of muscadine grapes. This work greatly enhances the understanding of anthocyanin biosynthesis in muscadine grapes and will facilitate future genetic modification of the antioxidants in V. rotundifolia. PMID:27754335

  12. Accumulation of Peptidoglycan O-Acetylation Leads to Altered Cell Wall Biochemistry and Negatively Impacts Pathogenesis Factors of Campylobacter jejuni*

    PubMed Central

    Ha, Reuben; Frirdich, Emilisa; Sychantha, David; Biboy, Jacob; Taveirne, Michael E.; Johnson, Jeremiah G.; DiRita, Victor J.; Vollmer, Waldemar; Clarke, Anthony J.; Gaynor, Erin C.

    2016-01-01

    Campylobacter jejuni is a leading cause of bacterial gastroenteritis in the developed world. Despite its prevalence, its mechanisms of pathogenesis are poorly understood. Peptidoglycan (PG) is important for helical shape, colonization, and host-pathogen interactions in C. jejuni. Therefore, changes in PG greatly impact the physiology of this organism. O-acetylation of peptidoglycan (OAP) is a bacterial phenomenon proposed to be important for proper cell growth, characterized by acetylation of the C6 hydroxyl group of N-acetylmuramic acid in the PG glycan backbone. The OAP gene cluster consists of a PG O-acetyltransferase A (patA) for translocation of acetate into the periplasm, a PG O-acetyltransferase B (patB) for O-acetylation, and an O-acetylpeptidoglycan esterase (ape1) for de-O-acetylation. In this study, reduced OAP in ΔpatA and ΔpatB had minimal impact on C. jejuni growth and fitness under the conditions tested. However, accumulation of OAP in Δape1 resulted in marked differences in PG biochemistry, including O-acetylation, anhydromuropeptide levels, and changes not expected to result directly from Ape1 activity. This suggests that OAP may be a form of substrate level regulation in PG biosynthesis. Ape1 acetylesterase activity was confirmed in vitro using p-nitrophenyl acetate and O-acetylated PG as substrates. In addition, Δape1 exhibited defects in pathogenesis-associated phenotypes, including cell shape, motility, biofilm formation, cell surface hydrophobicity, and sodium deoxycholate sensitivity. Δape1 was also impaired for chick colonization and adhesion, invasion, intracellular survival, and induction of IL-8 production in INT407 cells in vitro. The importance of Ape1 in C. jejuni biology makes it a good candidate as an antimicrobial target. PMID:27474744

  13. Accumulation of Peptidoglycan O-Acetylation Leads to Altered Cell Wall Biochemistry and Negatively Impacts Pathogenesis Factors of Campylobacter jejuni.

    PubMed

    Ha, Reuben; Frirdich, Emilisa; Sychantha, David; Biboy, Jacob; Taveirne, Michael E; Johnson, Jeremiah G; DiRita, Victor J; Vollmer, Waldemar; Clarke, Anthony J; Gaynor, Erin C

    2016-10-21

    Campylobacter jejuni is a leading cause of bacterial gastroenteritis in the developed world. Despite its prevalence, its mechanisms of pathogenesis are poorly understood. Peptidoglycan (PG) is important for helical shape, colonization, and host-pathogen interactions in C. jejuni Therefore, changes in PG greatly impact the physiology of this organism. O-acetylation of peptidoglycan (OAP) is a bacterial phenomenon proposed to be important for proper cell growth, characterized by acetylation of the C6 hydroxyl group of N-acetylmuramic acid in the PG glycan backbone. The OAP gene cluster consists of a PG O-acetyltransferase A (patA) for translocation of acetate into the periplasm, a PG O-acetyltransferase B (patB) for O-acetylation, and an O-acetylpeptidoglycan esterase (ape1) for de-O-acetylation. In this study, reduced OAP in ΔpatA and ΔpatB had minimal impact on C. jejuni growth and fitness under the conditions tested. However, accumulation of OAP in Δape1 resulted in marked differences in PG biochemistry, including O-acetylation, anhydromuropeptide levels, and changes not expected to result directly from Ape1 activity. This suggests that OAP may be a form of substrate level regulation in PG biosynthesis. Ape1 acetylesterase activity was confirmed in vitro using p-nitrophenyl acetate and O-acetylated PG as substrates. In addition, Δape1 exhibited defects in pathogenesis-associated phenotypes, including cell shape, motility, biofilm formation, cell surface hydrophobicity, and sodium deoxycholate sensitivity. Δape1 was also impaired for chick colonization and adhesion, invasion, intracellular survival, and induction of IL-8 production in INT407 cells in vitro The importance of Ape1 in C. jejuni biology makes it a good candidate as an antimicrobial target.

  14. Canola (Brassica napus L.) NAC103 transcription factor gene is a novel player inducing reactive oxygen species accumulation and cell death in plants.

    PubMed

    Niu, Fangfang; Wang, Boya; Wu, Feifei; Yan, Jingli; Li, Liang; Wang, Chen; Wang, Yiqiao; Yang, Bo; Jiang, Yuan-Qing

    2014-11-07

    NAC transcription factors are plant-specific and play important roles in many processes including plant development, response to biotic and abiotic stresses and hormone signaling. So far, only a few NAC genes have been identified to mediate cell death. In this study, we identified a novel NAC gene from canola (Brassica napus L.), BnaNAC103 which induces reactive oxygen species (ROS) accumulation and cell death in Nicotianabenthamiana leaves. We found that BnaNAC103 responded to multiple signalings, including cold, salicylic acid (SA) and a fungal pathogen Sclerotinia sclerotiorum. BnaNAC103 is located in the nucleus. Expression of full-length BnaNAC103, but not either the N-terminal NAC domain or C-terminal regulatory domain, was identified to induce hypersensitive response (HR)-like cell death when expressed in N. benthamiana. The cell death triggered by BnaNAC103 is preceded by accumulation of ROS, with diaminobenzidine (DAB) staining supporting this. Moreover, quantification of ion leakage and malondialdehyde (MDA) of leaf discs indicates significant cell membrane breakage and lipid peroxidation induced by BnaNAC103 expression. Taken together, our work has identified a novel NAC transcription factor gene modulating ROS level and cell death in plants.

  15. The importance of biological factors affecting trace metal concentration as revealed from accumulation patterns in co-occurring terrestrial invertebrates.

    PubMed

    Hendrickx, Frederik; Maelfait, Jean-Pierre; Bogaert, Nicolas; Tojal, Catarina; Du Laing, Gijs; Tack, Filip M G; Verloo, Marc G

    2004-01-01

    As physicochemical properties of the soil highly influence the bioavailable fraction of a particular trace metal, measured metal body burdens in a particular species are often assumed to be more reliable estimators of the contamination of the biota. To test this we compared the Cd, Cu and Zn content of three spiders (generalist predators) and two amphipods (detritivores), co-occurring in seven tidal marshes along the river Schelde, between each other and with the total metal concentrations and the concentrations of four sequential extractions of the soils. Correlations were significant in only one case and significant site x species interactions for all metals demonstrate that factors affecting metal concentration were species and site specific and not solely determined by site specific characteristics. These results emphasize that site and species specific biological factors might be of the utmost importance in determining the contamination of the biota, at least for higher trophic levels. A hypothetical example clarifies these findings.

  16. The bioaccumulation of polynuclear aromatic hydrocarbons by benthic invertebrates in an intertidal marsh

    SciTech Connect

    Maruya, K.A.; Risebrough, R.W.; Horne, A.J.

    1997-06-01

    Biota-sediment accumulation factors (BSAF; concentration in organism lipid/concentration in sediment on an organic carbon basis) of polyaromatic hydrocarbons varied with season and along an intertidal gradient in a coastal marsh in San Francisco Bay. The BSAFs were lowest during the local rainy season. During the dry season, BSAFs were lowest in the high intertidal zone closest to shore. Significant differences among species groups were also observed; BSAFs were lowest in polychaetes and highest in the Asian clam (Potamocorbula amurensis), varying over almost three orders of magnitude. The BSAFs decreased with increasing percent fines in the sediments and with PAH concentrations on an organic carbon basis. The authors suggest that a determining variable is the content of highly aromatic soot particles, which increases during periods of surface runoff and which is expected in the dry season to be highest in the high intertidal zone where these finer particles preferentially accumulate. Correlations of BSAFs with the ratio of the logarithm of the activity coefficients in porewaters to those in sediments were generally stronger than with log K{sub ow}, indicating a limitation of octanol as a surrogate for sediment organic carbon or organism lipid. These observations qualify but also strengthen the concept of equilibrium partitioning as the determining factor in bioaccumulation by benthic organisms of nonpolar organic compounds for sediments; the assumption that organic carbon can be considered in generic terms without allowance for aromaticity and probably other factors as well, must, however, be reconsidered.

  17. LARP4B is an AU-rich sequence associated factor that promotes mRNA accumulation and translation.

    PubMed

    Küspert, Maritta; Murakawa, Yasuhiro; Schäffler, Katrin; Vanselow, Jens T; Wolf, Elmar; Juranek, Stefan; Schlosser, Andreas; Landthaler, Markus; Fischer, Utz

    2015-07-01

    mRNAs are key molecules in gene expression and subject to diverse regulatory events. Regulation is accomplished by distinct sets of trans-acting factors that interact with mRNAs and form defined mRNA-protein complexes (mRNPs). The resulting "mRNP code" determines the fate of any given mRNA and thus controlling gene expression at the post-transcriptional level. The La-related protein 4B (LARP4B) belongs to an evolutionarily conserved family of RNA-binding proteins characterized by the presence of a La-module implicated in direct RNA binding. Biochemical experiments have shown previously direct interactions of LARP4B with factors of the translation machinery. This finding along with the observation of an association with actively translating ribosomes suggested that LARP4B is a factor contributing to the mRNP code. To gain insight into the function of LARP4B in vivo we tested its mRNA association at the transcriptome level and its impact on the proteome. PAR-CLIP analyses allowed us to identify the in vivo RNA targets of LARP4B. We show that LARP4B binds to a distinct set of cellular mRNAs by contacting their 3' UTRs. Biocomputational analysis combined with in vitro binding assays identified the LARP4B-binding motif on mRNA targets. The reduction of cellular LARP4B levels leads to a marked destabilization of its mRNA targets and consequently their reduced translation. Our data identify LARP4B as a component of the mRNP code that influences the expression of its mRNA targets by affecting their stability.

  18. Accumulate Repeat Accumulate Coded Modulation

    NASA Technical Reports Server (NTRS)

    Abbasfar, Aliazam; Divsalar, Dariush; Yao, Kung

    2004-01-01

    In this paper we propose an innovative coded modulation scheme called 'Accumulate Repeat Accumulate Coded Modulation' (ARA coded modulation). This class of codes can be viewed as serial turbo-like codes, or as a subclass of Low Density Parity Check (LDPC) codes that are combined with high level modulation. Thus at the decoder belief propagation can be used for iterative decoding of ARA coded modulation on a graph, provided a demapper transforms the received in-phase and quadrature samples to reliability of the bits.

  19. The influence of biotic and abiotic factors on (137)Cs accumulation in higher fungi after the accident at Chernobyl NPP.

    PubMed

    Zarubina, N

    2016-09-01

    Levels of soil contamination with (137)Cs, the belonging of fungi to a certain ecological group, the localization depth of the main part of mycelium in soil are the primary factors influencing the value of (137)Cs specific activity in higher fungi after the accident at Chernobyl NPP. It has been found that the value of (137)Cs specific activity in fungi of one species could vary by more than 10 times during a vegetation period. A correlation between the changes of (137)Cs content in fungi during the vegetation period and the amount of precipitates during various periods preceding the collection of samples has not been determined. An assumption has been proposed stating dependence between peculiarities of mycelium growth during the vegetation period and the changes of (137)Cs specific activity in fungi.

  20. Functional characterization of NAC55 transcription factor from oilseed rape (Brassica napus L.) as a novel transcriptional activator modulating reactive oxygen species accumulation and cell death.

    PubMed

    Niu, Fangfang; Wang, Chen; Yan, Jingli; Guo, Xiaohua; Wu, Feifei; Yang, Bo; Deyholos, Michael K; Jiang, Yuan-Qing

    2016-09-01

    NAC transcription factors (TFs) are plant-specific and play important roles in development, responses to biotic and abiotic cues and hormone signaling. So far, only a few NAC genes have been reported to regulate cell death. In this study, we identified and characterized a NAC55 gene isolated from oilseed rape (Brassica napus L.). BnaNAC55 responds to multiple stresses, including cold, heat, abscisic acid (ABA), jasmonic acid (JA) and a necrotrophic fungal pathogen Sclerotinia sclerotiorum. BnaNAC55 has transactivation activity and is located in the nucleus. BnaNAC55 is able to form homodimers in planta. Unlike ANAC055, full-length BnaNAC55, but not either the N-terminal NAC domain or C-terminal regulatory domain, induces ROS accumulation and hypersensitive response (HR)-like cell death when expressed both in oilseed rape protoplasts and Nicotiana benthamiana. Furthermore, BnaNAC55 expression causes obvious nuclear DNA fragmentation. Moreover, quantitative reverse transcription PCR (qRT-PCR) analysis identified that the expression levels of multiple genes regulating ROS production and scavenging, defense response as well as senescence are significantly induced. Using a dual luciferase reporter assay, we further confirm that BnaNAC55 could activate the expression of a few ROS and defense-related gene expression. Taken together, our work has identified a novel NAC TF from oilseed rape that modulates ROS accumulation and cell death.

  1. Fibroblast growth factor 21 reflects liver fat accumulation and dysregulation of signalling pathways in the liver of C57BL/6J mice

    PubMed Central

    Rusli, Fenni; Deelen, Joris; Andriyani, Evi; Boekschoten, Mark V.; Lute, Carolien; van den Akker, Erik B.; Müller, Michael; Beekman, Marian; Steegenga, Wilma T

    2016-01-01

    Fibroblast growth factor 21 (Fgf21) has emerged as a potential plasma marker to diagnose non-alcoholic fatty liver disease (NAFLD). To study the molecular processes underlying the association of plasma Fgf21 with NAFLD, we explored the liver transcriptome data of a mild NAFLD model of aging C57BL/6J mice at 12, 24, and 28 months of age. The plasma Fgf21 level significantly correlated with intrahepatic triglyceride content. At the molecular level, elevated plasma Fgf21 levels were associated with dysregulated metabolic and cancer-related pathways. The up-regulated Fgf21 levels in NAFLD were implied to be a protective response against the NAFLD-induced adverse effects, e.g. lipotoxicity, oxidative stress and endoplasmic reticulum stress. An in vivo PPARα challenge demonstrated the dysregulation of PPARα signalling in the presence of NAFLD, which resulted in a stochastically increasing hepatic expression of Fgf21. Notably, elevated plasma Fgf21 was associated with declining expression of Klb, Fgf21’s crucial co-receptor, which suggests a resistance to Fgf21. Therefore, although liver fat accumulation is a benign stage of NAFLD, the elevated plasma Fgf21 likely indicated vulnerability to metabolic stressors that may contribute towards progression to end-stage NAFLD. In conclusion, plasma levels of Fgf21 reflect liver fat accumulation and dysregulation of metabolic pathways in the liver. PMID:27470139

  2. The bHLH transcription factor MdbHLH3 promotes anthocyanin accumulation and fruit colouration in response to low temperature in apples.

    PubMed

    Xie, Xing-Bin; Li, Shen; Zhang, Rui-Fen; Zhao, Jing; Chen, Ying-Chun; Zhao, Qiang; Yao, Yu-Xin; You, Chun-Xiang; Zhang, Xian-Sheng; Hao, Yu-Jin

    2012-11-01

    Low environmental temperatures promote anthocyanin accumulation and fruit colouration by up-regulating the expression of genes involved in anthocyanin biosynthesis and regulation in many fruit trees. However, the molecular mechanism by which fruit trees regulate this process in response to low temperature (LT) remains largely unknown. In this study, the cold-induced bHLH transcription factor gene MdbHLH3 was isolated from an apple tree and was found to interact physically and specifically through two regions (amino acids 1-23 and 186-228) at the N terminus with the MYB partner MdMYB1 (allelic to MdMYB10). Subsequently, MdbHLH3 bound to the promoters of the anthocyanin biosynthesis genes MdDFR and MdUFGT and the regulatory gene MdMYB1 to activate their expression. Furthermore, the MdbHLH3 protein was post-translationally modified, possibly involving phosphorylation following exposure to LTs, which enhanced its promoter-binding capacity and transcription activity. Our results demonstrate the molecular mechanism by which MdbHLH3 regulates LT-induced anthocyanin accumulation and fruit colouration in apple.

  3. Nuclear accumulation of epidermal growth factor receptor and acceleration of G1/S stage by Epstein-Barr-encoded oncoprotein latent membrane protein 1

    SciTech Connect

    Tao Yongguang; Song Xing; Deng Xiyun; Xie Daxin; Lee, Leo M.; Liu Yiping; Li Wei; Li Lili; Deng Lin; Wu Qiao; Gong Jianping; Cao Ya . E-mail: ycao98@public.cs.hn.cn

    2005-02-15

    Epstein-Barr virus (EBV)-encoded latent membrane protein 1 (LMP1) is considered to be the major oncogenic protein of EBV-encoded proteins and has always been the core of the oncogenic mechanism of EBV. Advanced studies on nuclear translocation of the epidermal growth factor receptor (EGFR) family have greatly improved our knowledge of the biological function of cell surface receptors. In this study, we used the Tet-on LMP1 HNE2 cell line as a cell model, which is a dual-stable LMP1-integrated nasopharyngeal carcinoma (NPC) cell line and the expression of LMP1 which could be regulated by the Tet system. We found that LMP1 could regulate the nuclear accumulation of EGFR in a dose-dependent manner quantitatively and qualitatively. We also demonstrated that the nuclear localization sequence of EGFR played some roles in the location of the protein within the nucleus under LMP1 regulation and EGFR in the nucleus could bind to the promoters of cyclinD1 and cyclinE, respectively. We further demonstrated that EGFR is involved in the acceleration of the G1/S phase transition by LMP1 through binding to cyclinD1 and cyclinE directly. These findings provided a novel view that the acceleration of LMP1 on the G1/S transition via the nuclear accumulation of EGFR was critical in the process of nasopharyngeal carcinoma.

  4. Deregulation of Sucrose-Controlled Translation of a bZIP-Type Transcription Factor Results in Sucrose Accumulation in Leaves

    PubMed Central

    Lee, Sung Shin; Yang, Seung Hwan; Zhu, XuJun; Imai, Ryozo; Takahashi, Yoshihiro; Kusano, Tomonobu

    2012-01-01

    Sucrose is known to repress the translation of Arabidopsis thaliana AtbZIP11 transcript which encodes a protein belonging to the group of S (S - stands for small) basic region-leucine zipper (bZIP)-type transcription factor. This repression is called sucrose-induced repression of translation (SIRT). It is mediated through the sucrose-controlled upstream open reading frame (SC-uORF) found in the AtbZIP11 transcript. The SIRT is reported for 4 other genes belonging to the group of S bZIP in Arabidopsis. Tobacco tbz17 is phylogenetically closely related to AtbZIP11 and carries a putative SC-uORF in its 5′-leader region. Here we demonstrate that tbz17 exhibits SIRT mediated by its SC-uORF in a manner similar to genes belonging to the S bZIP group of the Arabidopsis genus. Furthermore, constitutive transgenic expression of tbz17 lacking its 5′-leader region containing the SC-uORF leads to production of tobacco plants with thicker leaves composed of enlarged cells with 3–4 times higher sucrose content compared to wild type plants. Our finding provides a novel strategy to generate plants with high sucrose content. PMID:22457737

  5. Comparison of Laboratory Measured BCFs, BMFs, and BSAFs to Field Measured BAFs, BMFs, and BSAFs

    EPA Science Inventory

    A series of workshops on bioaccumulation science and issues have been held since 2005, and the foci of these past workshops were1) Bioaccumulation Data Sources, 2) In Vitro/ADME (absorption, distribution, metabolism, and excretion) in Bioaccumulation Assessments, and 3) Bioaccumu...

  6. The barley HvNAC6 transcription factor affects ABA accumulation and promotes basal resistance against powdery mildew.

    PubMed

    Chen, Yan-Jun; Perera, Venura; Christiansen, Michael W; Holme, Inger B; Gregersen, Per L; Grant, Murray R; Collinge, David B; Lyngkjær, Michael F

    2013-12-01

    Barley HvNAC6 is a member of the plant-specific NAC (NAM, ATAF1,2, CUC2) transcription factor family and we have shown previously that it acts as a positive regulator of basal resistance in barley against the biotrophic pathogen Blumeria graminis f. sp. hordei (Bgh). In this study, we use a transgenic approach to constitutively silence HvNAC6 expression, using RNA interference (RNAi), to investigate the in vivo functions of HvNAC6 in basal resistance responses in barley in relation to the phytohormone ABA. The HvNAC6 RNAi plants displayed reduced HvNAC6 transcript levels and were more susceptible to Bgh than wild-type plants. Application of exogenous ABA increased basal resistance against Bgh in wild-type plants, but not in HvNAC6 RNAi plants, suggesting that ABA is a positive regulator of basal resistance which depends on HvNAC6. Silencing of HvNAC6 expression altered the light/dark rhythm of ABA levels which were, however, not influenced by Bgh inoculation. The expression of the two ABA biosynthetic genes HvNCED1 and HvNCED2 was compromised, and transcript levels of the ABA conjugating HvBG7 enzyme were elevated in the HvNAC6 RNAi lines, but this effect was not clearly associated with transgene-mediated resistance. Together, these data support a function of HvNAC6 as a regulator of ABA-mediated defence responses for maintenance of effective basal resistance against Bgh.

  7. Polycyclic aromatic hydrocarbon bioaccumulation by meiobenthic copepods inhabiting a superfund site: techniques for micromass body burden and total lipid analysis.

    PubMed

    Klosterhaus, Susan L; Ferguson, P Lee; Chandlert, G Thomas

    2002-11-01

    Microtechniques for polycyclic aromatic hydrocarbon (PAH) body burden and total lipid analysis were developed and applied to determine the first lipid-normalized bioaccumulation factors for a hydrophobic organic toxicant in a meiobenthic organism (0.063-0.500 mm) living in field-contaminated sediments. The total lipid microtechnique combines the standard Bligh-Dyer extraction method with a colorimetric quantification method for analysis of samples containing I to 50 microg lipid. The microtechnique for body burden analysis quantifies PAHs from tissue samples containing as little as 10 pg PAH. Fluoranthene, benz[a]anthracene, and benzo[a]pyrene biota-sediment accumulation factors (BSAFs) were determined for the meiobenthic copepod Microarthridion littorale living in an estuarine U.S. Environmental Protection Agency Superfund site. Gravid female, nongravid female, and male BSAFs were 0.82, 0.54, and 0.36, respectively, for fluoranthene; 0.50, 0.44, and 0.40, respectively, for benz[a]anthracene; and 0.09, 0.12, and 0.15, respectively, for benzo[a]pyrene. Comparison of nonlipid-normalized bioaccumulation factors (BAFs) to BSAFs indicates that M. littorale bioaccumulated PAHs on a gram lipid basis. The BSAFs declined consistently with increasing PAH log K(ow) for all copepod sex and reproductive stages. Sex- and stage-specific comparisons of BSAFs suggest that differences in lipid content and quality may lead to differences in BSAF values depending on PAH molecular weight and/or hydrophobicity.

  8. Cyclooxygenase-2 induction and prostaglandin E2 accumulation in squamous cell carcinoma as a consequence of epidermal growth factor receptor activation by imatinib mesylate.

    PubMed

    Johnson, Faye M; Yang, Peiying; Newman, Robert A; Donato, Nicholas J

    2004-12-01

    Imatinib mesylate is a novel anti-tumor agent useful in the clinical management of chronic myelogenous leukemia and gastrointestinal stromal tumors with minimal toxicity relative to other forms of cancer therapy. Its clinical activity and minimal toxicity are related to specific inhibition of cellular targets including BCR-ABL, platelet-derived growth factor receptor and c-kit kinases, resulting in the collapse of downstream signaling cascades important for transformation. In some patients, unexpected toxicities arise that are not associated with inhibition of any known cellular imatinib target. In this report, we investigated the effects of imatinib on squamous carcinoma cell signaling. Imatinib induced expression of COX-2 in a dose-dependent manner with concomitant accumulation of prostaglandin E2. COX-2 induction by imatinib was initiated through epidermal growth factor (EGF) receptor kinase activation and downstream signaling through mitogenic-activated protein kinase. COX-2 induction by imatinib was blocked by MEK1 or EGF receptor inhibition. Imatinib did not activate stressor cytokine-signaling pathways (p38 kinase, nuclear factor-kB nuclear translocation) or affect COX-1 expression. Imatinib failed to activate EGF receptor signals in other tumor types, suggesting that COX-2 induction in imatinib-treated cells is mediated through release of autocrine factors expressed or activated in squamous tumors. COX-2 induction by imatinib in squamous tumors derived from the head and neck region is unique with respect to other target-specific agents and may represent one of the unintended toxic effects of imatinib described in some patients.

  9. Both microtubule-stabilizing and microtubule-destabilizing drugs inhibit hypoxia-inducible factor-1alpha accumulation and activity by disrupting microtubule function.

    PubMed

    Escuin, Daniel; Kline, Erik R; Giannakakou, Paraskevi

    2005-10-01

    We have recently identified a mechanistic link between disruption of the microtubule cytoskeleton and inhibition of tumor angiogenesis via the hypoxia-inducible factor-1 (HIF-1) pathway. Based on this model, we hypothesized that other microtubule-targeting drugs may have a similar effect on HIF-1alpha. To test that hypothesis, we studied the effects of different clinically relevant microtubule-disrupting agents, including taxotere, epothilone B, discodermolide, vincristine, 2-methoxyestradiol, and colchicine. In all cases, HIF-1alpha protein, but not mRNA, was down-regulated in a drug dose-dependent manner. In addition, HIF-1alpha transcriptional activity was also inhibited by all drugs tested. To further examine whether these effects were dependent on microtubule network disruption, we tested the ability of epothilone B to inhibit HIF-1alpha protein in the human ovarian cancer cell line 1A9 and its beta-tubulin mutant epothilone-resistant subclone 1A9/A8. Our data showed that epothilone B treatment down-regulated HIF-1alpha protein in the parental 1A9 cells but had no effect in the resistant 1A9/A8 cells. These observations were confirmed by confocal microscopy, which showed impaired nuclear accumulation of HIF-1alpha in parental 1A9 cells at epothilone B concentrations that induced extensive microtubule stabilization. In contrast, epothilone B treatment had no effect on either microtubules or HIF-1alpha nuclear accumulation in the resistant 1A9/A8 cells. Furthermore, epothilone B inhibited HIF-1 transcriptional activity in 1A9 cells, as evidenced by a hypoxia response element-luciferase reporter assay, but had no effect on HIF-1 activity in the resistant 1A9/A8 cells. These data directly link beta-tubulin drug binding with HIF-1alpha protein inhibition. Our results further provide a strong rationale for testing taxanes and epothilones in clinical trials targeting HIF-1 in cancer patients.

  10. Deriving in vivo biotransformation rate constants and metabolite parent concentration factor/stable metabolite factor from bioaccumulation and bioconcentration experiments: An illustration with worm accumulation data.

    PubMed

    Kuo, Dave Ta Fu; Chen, Ciara Chun

    2016-12-01

    Growing concern for the biological fate of organic contaminants and their metabolites and the urge to connect in vitro and in vivo toxicokinetics have prompted researchers to characterize the biotransformation behavior of organic contaminants in biota. The whole body biotransformation rate constant (kM ) is currently determined by the difference approach, which has significant methodological limitations. A new approach for determining kM from the kinetic observations of the parent contaminant and its intermediate metabolites is proposed. In this method, kM can be determined by fitting kinetic data of the parent contaminant and the metabolites to analytical equations that depict the bioaccumulation kinetics. The application of the proposed method is illustrated using worm bioaccumulation-biotransformation data collected from the literature. Furthermore, a metabolite parent concentration factor (MPCF) is also proposed to characterize the persistence of the metabolite in biota. Because both the proposed kM method and MPCF build on the existing theoretical framework for bioaccumulation, they can be readily incorporated into standard experimental bioaccumulation protocols or risk assessment procedures or frameworks. Possible limitations, implications, and future directions are elaborated. Environ Toxicol Chem 2016;35:2903-2909. © 2016 SETAC.

  11. The contrasting roles of sedimentary plant-derived carbon and black carbon on sediment-spiked hydrophobic organic contaminant bioavailability to Diporeia species and Lumbriculus variegatus.

    PubMed

    Kukkonen, Jussi V K; Mitra, Siddhartha; Landrum, Peter F; Gossiaux, Duane C; Gunnarsson, Jonas; Weston, Donald

    2005-04-01

    In bioavailability studies, the biota sediment accumulation factor (BSAF) is invoked to describe the thermodynamic partitioning of a hydrophobic organic contaminant (HOC) between the organism lipid and the organic carbon fraction of the sedimentary matrix and accounts for differences in bioavailability among sediments. Bioaccumulation experiments were performed with Lumbriculus variegatus and Diporeia species exposed in seven sediments dosed with 2,4,5,2',4',5'-hexachlorobiphenyl (HCBP) and benzo[a]pyrene (BaP) or pyrene (PY) and 3,4,3',4'-tetrachlorobiphenyl (TCBP). The BSAF values for the nonplanar HCBP were consistent with equilibrium partitioning theory (EQP) and averaged 2.87 for L. variegatus and 1.45 for Diporeia, while the BSAF values for the planar compounds (BaP, PY, TCBP) were generally lower than estimated from EQP (<1). Correcting the BSAF values of the planar compounds for enhanced sorption due to black carbon improved the BSAF values for L. variegatus, generally resulting in values consistent with EQP, but substantial variation remained for Diporeia. The BSAF values for the planar compounds showed significant positive correlations with plant-derived carbon in sediments (lignin and pigments) but were more consistent for L. variegatus than for Diporeia. These correlations imply that compounds sorbed to plant-derived carbon are more bioavailable since this material is more likely ingested providing a second exposure route.

  12. Specific Accumulation of Tumor-Derived Adhesion Factor in Tumor Blood Vessels and in Capillary Tube-Like Structures of Cultured Vascular Endothelial Cells

    NASA Astrophysics Data System (ADS)

    Akaogi, Kotaro; Okabe, Yukie; Sato, Junji; Nagashima, Yoji; Yasumitsu, Hidetaro; Sugahara, Kazuyuki; Miyazaki, Kaoru

    1996-08-01

    Tumor-derived adhesion factor (TAF) was previously identified as a cell adhesion molecule secreted by human bladder carcinoma cell line EJ-1. To elucidate the physiological function of TAF, we examined its distribution in human normal and tumor tissues. Immunochemical staining with an anti-TAF monoclonal antibody showed that TAF was specifically accumulated in small blood vessels and capillaries within and adjacent to tumor nests, but not in those in normal tissues. Tumor blood vessel-specific staining of TAF was observed in various human cancers, such as esophagus, brain, lung, and stomach cancers. Double immunofluorescent staining showed apparent colocalization of TAF and type IV collagen in the vascular basement membrane. In vitro experiments demonstrated that TAF preferentially bound to type IV collagen among various extracellular matrix components tested. In cell culture experiments, TAF promoted adhesion of human umbilical vein endothelial cells to type IV collagen substrate and induced their morphological change. Furthermore, when the endothelial cells were induced to form capillary tube-like structures by type I collagen, TAF and type IV collagen were exclusively detected on the tubular structures. The capillary tube formation in vitro was prevented by heparin, which inhibited the binding of TAF to the endothelial cells. These results strongly suggest that TAF contributes to the organization of new capillary vessels in tumor tissues by modulating the interaction of endothelial cells with type IV collagen.

  13. Site-wise mercury accumulation in fish from Thane creek and Ulhas river estuary in the vicinity of Mumbai: influence of environmental factors.

    PubMed

    Menon, Jayashree; Mahajan, Sarita

    2013-01-01

    They indigenous fishing folk inhabiting the villages along Thane creek and Ulhas river estuary in the vicinity of Mumbai, India rely on the local fish catch for their daily sustenance. But these water bodies are under considerable pollution stress due to the indiscriminate release of industrial effluents and domestic wastewater from their vicinity. A site-wise study on levels of mercury, a hazardous toxin, in commonly consumed fish among five villages along these water bodies was conducted. Stations located towards the riverine end of Ulhas river estuary, Wehele and Alimgarh, exhibited higher levels of fish Hg (0.2-1.6 μg/g) compared to the station at the seaward end, Diwe-Kewni (0.03-0.75 μg/g). Fish from stations, Vittawa and Airoli, located along Thane creek accumulated Hg relatively at moderate levels (0.15-0.96 μg/g). The influencing factors for bioaccumulation of mercury in fish were proximity to the sources of mercury, salinity, hardness, DO, BOD and pH of the water.

  14. Pancreatic adenocarcinoma up-regulated factor (PAUF) enhances the accumulation and functional activity of myeloid-derived suppressor cells (MDSCs) in pancreatic cancer.

    PubMed

    Song, Jinhoi; Lee, Jaemin; Kim, Jinsil; Jo, Seongyea; Kim, Yeon Jeong; Baek, Ji Eun; Kwon, Eun-Soo; Lee, Kwang-Pyo; Yang, Siyoung; Kwon, Ki-Sun; Kim, Dong-Uk; Kang, Tae Heung; Park, Yun-Yong; Chang, Suhwan; Cho, Hee Jun; Kim, Song Cheol; Koh, Sang Seok; Kim, Seokho

    2016-08-09

    Pancreatic cancer is characterized by an immunosuppressive tumor microenvironment (TME) with a profound immune infiltrate populated by a significant number of myeloid-derived suppressor cells (MDSCs). MDSCs have been increasingly recognized for their role in immune evasion and cancer progression as well as their potential as a target for immunotherapy. However, not much is known about the mechanisms regulating their behavior and function in the pancreatic TME. Here we report that pancreatic adenocarcinoma up-regulated factor (PAUF), a soluble protein involved in pancreatic tumorigenesis and metastasis, plays a role as an enhancer of tumor-infiltrating MDSC and its functional activity. We show that PAUF enhanced the accumulation of MDSCs in the spleen and tumor tissues of PAUF-overexpressing tumor cell-injected mice. In addition, PAUF was found to enhance the immunosuppressive function of MDSCs via the TLR4-mediated signaling pathway, which was demonstrated by PAUF-induced increased levels of arginase, nitric oxide (NO), and reactive oxygen species (ROS). The role of PAUF in modulating the functional properties of MDSCs was further demonstrated by the use of a PAUF-neutralizing antibody that caused a decreased number of tumor-infiltrating MDSCs and reduced MDSC immunosuppressive activity. The observations made in mice were confirmed in human pancreatic cancer patient-derived MDSCs, supporting the clinical relevance of our findings. Collectively, we conclude that the PAUF is a powerful and multifunctional promoter of tumor growth through increase and functional activation of MDSCs, suggesting therapeutic potential for targeting PAUF in pancreatic cancers.

  15. A systems-oriented analysis of the grapevine R2R3-MYB transcription factor family uncovers new insights into the regulation of stilbene accumulation

    PubMed Central

    Wong, Darren Chern Jan; Schlechter, Rudolf; Vannozzi, Alessandro; Höll, Janine; Hmmam, Ibrahim; Bogs, Jochen; Tornielli, Giovanni Battista; Castellarin, Simone Diego; Matus, José Tomás

    2016-01-01

    R2R3-MYB transcription factors (TFs) belong to a large and functionally diverse protein superfamily in plants. In this study, we explore the evolution and function of this family in grapevine (Vitis vinifera L.), a high-value fruit crop. We identified and manually curated 134 genes using RNA-Seq data, and named them systematically according to the Super-Nomenclature Committee. We identified novel genes, splicing variants and grapevine/woody-specific duplicated subgroups, suggesting possible neo- and sub-functionalization events. Regulatory network analysis ascribed biological functions to uncharacterized genes and validated those of known genes (e.g. secondary cell wall biogenesis and flavonoid biosynthesis). A comprehensive analysis of different MYB binding motifs in the promoters of co-expressed genes predicted grape R2R3-MYB binding preferences and supported evidence for putative downstream targets. Enrichment of cis-regulatory motifs for diverse TFs reinforced the notion of transcriptional coordination and interaction between MYBs and other regulators. Analysis of the network of Subgroup 2 showed that the resveratrol-related VviMYB14 and VviMYB15 share common co-expressed STILBENE SYNTHASE genes with the uncharacterized VviMYB13. These regulators have distinct expression patterns within organs and in response to biotic and abiotic stresses, suggesting a pivotal role of VviMYB13 in regulating stilbene accumulation in vegetative tissues and under biotic stress conditions. PMID:27407139

  16. Interleukin17A Promotes Postoperative Cognitive Dysfunction by Triggering β-Amyloid Accumulation via the Transforming Growth Factor-β (TGFβ)/Smad Signaling Pathway

    PubMed Central

    Tian, Ayong; Ma, Hong; Zhang, Rongwei; Tan, Wenfei; Wang, Xiaolong; Wu, Binyang; Wang, Jun; Wan, Chengfu

    2015-01-01

    Although postoperative cognitive dysfunction (POCD) is relatively common in elderly patients who have undergone major surgery, the mechanisms underlying this postoperative complication are unclear. Previously, we have investigated the role of cytokine-mediated hippocampal inflammation in the development of POCD in a rat model. Here, we sought to determine in mice the role of cytokine interleukin17A (IL17A) in POCD and to characterize the associated signaling pathways. Old mice underwent hepatectomy surgery in the presence or absence of IL17A monoclonal antibody, and cognitive function, hippocampal neuroinflammation, and pathologic markers of Alzheimer’s disease (AD) were assessed. We found that the level of IL17A in the hippocampus was increased in hepatectomy mice and that cognitive impairment after surgery was associated with the appearance of certain pathological hallmarks of AD: activation of astrocytes, β-amyloid1-42 (Aβ1–42) production, upregulation of transforming growth factor-β (TGFβ), and increased phosphorylation of signaling mother against decapentaplegic peptide 3 (Smad3) protein in the hippocampus. Surgery-induced changes in cognitive dysfunction and changes in Aβ1–42 and TGFβ/Smad signaling were prevented by the administration of IL17A monoclonal antibody. In addition, IL17A-stimulated TGFβ/Smad activation and Aβ1–42 expression were reversed by IL17A receptor small interfering RNA and a TGFβ receptor inhibitor in cultured astrocytes. Our findings suggest that surgery can provoke IL17A-related hippocampal damage, as characterized by activation of astrocytes and TGFβ/Smad pathway dependent Aβ1–42 accumulation in old subjects. These changes likely contribute to the cognitive decline seen in POCD. PMID:26509545

  17. TaMYB13-1, a R2R3 MYB transcription factor, regulates the fructan synthetic pathway and contributes to enhanced fructan accumulation in bread wheat

    PubMed Central

    Kooiker, Maarten; Drenth, Janneke; Glassop, Donna; McIntyre, C. Lynne; Xue, Gang-Ping

    2013-01-01

    Fructans are the major component of temporary carbon reserve in the stem of temperate cereals, which is used for grain filling. Three families of fructosyltransferases are directly involved in fructan synthesis in the vacuole of Triticum aestivum. The regulatory network of the fructan synthetic pathway is largely unknown. Recently, a sucrose-upregulated wheat MYB transcription factor (TaMYB13-1) was shown to be capable of activating the promoter activities of sucrose:sucrose 1-fructosyltransferase (1-SST) and sucrose:fructan 6-fructosyltransferase (6-SFT) in transient transactivation assays. This work investigated TaMYB13-1 target genes and their influence on fructan synthesis in transgenic wheat. TaMYB13-1 overexpression resulted in upregulation of all three families of fructosyltransferases including fructan:fructan 1-fructosyltransferase (1-FFT). A γ-vacuolar processing enzyme (γ-VPE1), potentially involved in processing the maturation of fructosyltransferases in the vacuole, was also upregulated by TaMYB13-1 overexpression. Multiple TaMYB13 DNA-binding motifs were identified in the Ta1-FFT1 and Taγ-VPE1 promoters and were bound strongly by TaMYB13-1. The expression profiles of these target genes and TaMYB13-1 were highly correlated in recombinant inbred lines and during stem development as well as the transgenic and non-transgenic wheat dataset, further supporting a direct regulation of these genes by TaMYB13-1. TaMYB13-1 overexpression in wheat led to enhanced fructan accumulation in the leaves and stems and also increased spike weight and grain weight per spike in transgenic plants under water-limited conditions. These data suggest that TaMYB13-1 plays an important role in coordinated upregulation of genes necessary for fructan synthesis and can be used as a molecular tool to improve the high fructan trait. PMID:23873993

  18. Pancreatic adenocarcinoma up-regulated factor (PAUF) enhances the accumulation and functional activity of myeloid-derived suppressor cells (MDSCs) in pancreatic cancer

    PubMed Central

    Jo, Seongyea; Kim, Yeon Jeong; Baek, Ji Eun; Kwon, Eun-Soo; Lee, Kwang-Pyo; Yang, Siyoung; Kwon, Ki-Sun; Kim, Dong-Uk; Kang, Tae Heung; Park, Yun-Yong; Chang, Suhwan; Cho, Hee Jun; Kim, Song Cheol; Koh, Sang Seok; Kim, Seokho

    2016-01-01

    Pancreatic cancer is characterized by an immunosuppressive tumor microenvironment (TME) with a profound immune infiltrate populated by a significant number of myeloid-derived suppressor cells (MDSCs). MDSCs have been increasingly recognized for their role in immune evasion and cancer progression as well as their potential as a target for immunotherapy. However, not much is known about the mechanisms regulating their behavior and function in the pancreatic TME. Here we report that pancreatic adenocarcinoma up-regulated factor (PAUF), a soluble protein involved in pancreatic tumorigenesis and metastasis, plays a role as an enhancer of tumor-infiltrating MDSC and its functional activity. We show that PAUF enhanced the accumulation of MDSCs in the spleen and tumor tissues of PAUF-overexpressing tumor cell-injected mice. In addition, PAUF was found to enhance the immunosuppressive function of MDSCs via the TLR4-mediated signaling pathway, which was demonstrated by PAUF-induced increased levels of arginase, nitric oxide (NO), and reactive oxygen species (ROS). The role of PAUF in modulating the functional properties of MDSCs was further demonstrated by the use of a PAUF-neutralizing antibody that caused a decreased number of tumor-infiltrating MDSCs and reduced MDSC immunosuppressive activity. The observations made in mice were confirmed in human pancreatic cancer patient-derived MDSCs, supporting the clinical relevance of our findings. Collectively, we conclude that the PAUF is a powerful and multifunctional promoter of tumor growth through increase and functional activation of MDSCs, suggesting therapeutic potential for targeting PAUF in pancreatic cancers. PMID:27322081

  19. Cell size regulation, a mechanism that controls cellular RNA accumulation: consequences on regulation of the ubiquitous transcription factors Oct1 and NF-Y and the liver-enriched transcription factor DBP

    PubMed Central

    1995-01-01

    Cell sizes can differ vastly between cell types in individual metazoan organisms. In rat liver, spleen, and thymus, differences in average cell size roughly reflect differences in RNA:DNA ratios. For example, hepatocytes were found to have a cytoplasmic:nuclear volume ratio and an RNA:DNA ratio which were 34- and 21-fold higher, respectively, than those in thymocytes. RNA synthesis per DNA-equivalent in the hepatocytes was 25-fold greater than that in thymocytes, suggesting that differences in overall transcriptional activity, not differences in overall RNA stability, were primarily responsible for determining cellular RNA:DNA ratios. The mechanisms determining the capacity of large cells to synthesize and accumulate more ubiquitous cytoplasmic macromolecules, such as ribosomes, than smaller cells is entitled "cell size regulation." Cell size regulation may have important consequences on the tissue distribution of transcription factors. Thus, in liver, lung, kidney, spleen, and brain, cellular levels of the mRNA encoding the leucine zipper protein DBP correlate closely to cellular RNA:DNA ratios. Our results suggest that DBP mRNA levels, like rRNA levels, are transcriptionally determined. Thus the dbp gene, like the ribosomal genes, may be subject to cell size regulation. As a consequence, nuclei from liver, a tissue with a very large average cell size, accumulated higher levels of DBP protein than nuclei from small-celled tissues, such as spleen or lung. In contrast to DBP, the ubiquitous transcription factors Oct1 and NF-Y escaped cell size control. Nuclei from most tissues contained similar amounts of these factors irrespective of cell size. Likewise, tissues with large or small average cell sizes contained similar levels of the mRNAs encoding Oct1 or NF-Ya, one of the subunits of the heteromeric CCAAT-binding factor NF-Y, per DNA-equivalent. Interestingly, mRNA encoding NF-Yb, another subunit of NF-Y, was subject to cell size regulation. Our results suggest

  20. Induction by mercury compounds of metallothioneins in mouse tissues: inorganic mercury accumulation is not a dominant factor for metallothionein induction in the liver.

    PubMed

    Yasutake, Akira; Nakamura, Masaaki

    2011-06-01

    Among the naturally occurring three mercury species, metallic mercury (Hg(0)), inorganic mercury (Hg(II)) and methylmercury (MeHg), Hg(II) is well documented to induce metallothionein (MT) in tissues of injected animals. Although Hg(0) and MeHg are considered to be inert in terms of directly inducing MT, MT can be induced by them after in vivo conversion to Hg(II) in an animal body. In the present study we examined accumulations of inorganic mercury and MT inductions in mouse tissues (brain, liver and kidney) up to 72 hr after treatment by one of three mercury compounds of sub-lethal doses. Exposure to mercury compounds caused significant mercury accumulations in mouse tissues examined, except for the Hg(II)-treated mouse brain. Although MeHg caused the highest total mercury accumulation in all tissues among mercury compounds, the rates of inorganic mercury were less than 10% through the experimental period. MT inductions that depended on the inorganic mercury accumulation were observed in kidney and brain. However, MT induction in the liver could not be accounted for by the inorganic mercury accumulation, but by plasma IL6 levels, marked elevation of which was observed in Hg(II) or MeHg-treated mouse. The present study demonstrated that MT was induced in mouse tissues after each of three mercury compounds, Hg(0), Hg(II) and MeHg, but the induction processes were different among tissues. The induction would occur directly through accumulation of inorganic mercury in brain and kidney, whereas the hepatic MT might be induced secondarily through mercury-induced elevation in the plasma cytokines, rather than through mercury accumulation in the tissue.

  1. Gypsum accumulation on carbonate stone

    USGS Publications Warehouse

    McGee, E.S.; Mossotti, V.G.

    1992-01-01

    The accumulation of gypsum on carbonate stone has been investigated through exposure of fresh samples of limestone and marble at monitored sites, through examination of alteration crusts from old buildings and through laboratory experiments. Several factors contribute to gypsum accumulation on carbonate stone. Marble or limestone that is sheltered from direct washing by rain in an urban environment with elevated pollution levels is likely to accumulate a gypsum crust. Crust development may be enhanced if the stone is porous or has an irregular surface area. Gypsum crusts are a surficial alteration feature; gypsum crystals form at the pore opening-air interface, where evaporation is greatest.

  2. Antioxidant enzyme systems and the ascorbate-glutathione cycle as contributing factors to cadmium accumulation and tolerance in two oilseed rape cultivars (Brassica napus L.) under moderate cadmium stress.

    PubMed

    Wu, Zhichao; Zhao, Xiaohu; Sun, Xuecheng; Tan, Qiling; Tang, Yafang; Nie, Zhaojun; Qu, Chanjuan; Chen, Zuoxin; Hu, Chengxiao

    2015-11-01

    Oilseed rape (Brassica napus L.) with high tolerance to cadmium (Cd) may be used in the phytoremediation of Cd-contaminated fields. However, the mechanisms responsible for Cd accumulation and tolerance in oilseed rape are still poorly understood. Here, we investigated the physiological and molecular processes involved in Cd tolerance of two oilseed rape cultivars with different Cd accumulation abilities. The total Cd accumulation in cultivar L351 was higher than cultivar L338, particularly with increasing concentrations of Cd exposure. L338 was a more pronounced Cd-sensitive cultivar than L351, while higher activities of antioxidant enzymes (CAT, APX, GR, DHAR) as well as higher contents of GSH and AsA were all observed in L351 under Cd treatments, especially at high levels. No differences were found in SOD activities between the two cultivars under the same Cd treatments, suggesting that SOD was not the key factor in relation to the differences of Cd tolerance and accumulation between them. Gene expression levels of BnFe-SOD, BnCAT, BnAPX, BcGR and BoDHAR in roots of L351 were relatively higher than that in L338 under Cd exposure as well as BnCAT and BcGR in leaves. It is concluded that antioxidant enzymes and the ascorbate-glutathione cycle play important roles in oilseed rape Cd accumulation and tolerance.

  3. Bioaccumulation and enantioselectivity of type I and type II pyrethroid pesticides in earthworm.

    PubMed

    Chang, Jing; Wang, Yinghuan; Wang, Huili; Li, Jianzhong; Xu, Peng

    2016-02-01

    In this study, the bioavailability and enantioselectivity differences between bifenthrin (BF, typeⅠpyrethroid) and lambad-cyhalothrin (LCT, type Ⅱ pyrethroid) in earthworm (Eisenia fetida) were investigated. The bio-soil accumulation factors (BSAFs) of BF was about 4 times greater than that of LCT. LCT was degraded faster than BF in soil while eliminated lower in earthworm samples. Compound sorption plays an important role on bioavailability in earthworm, and the soil-adsorption coefficient (K(oc)) of BF and LCT were 22 442 and 42 578, respectively. Metabolic capacity of earthworm to LCT was further studied as no significant difference in the accumulation of LCT between the high and low dose experiment was found. 3-phenoxybenzoic acid (PBCOOH), a metabolite of LCT produced by earthworm was detected in soil. The concentration of PBCOOH at high dose exposure was about 4.7 times greater than that of in low dose level at the fifth day. The bioaccumulation of BF and LCT were both enantioselective in earthworm. The enantiomer factors of BF and LCT in earthworm were approximately 0.12 and 0.65, respectively. The more toxic enantiomers ((+)-BF and (-)-LCT) had a preferential degradation in earthworm and leaded to less toxicity on earthworm for racemate exposure. In combination with other studies, a liner relationship between Log BSAF(S) and Log K(ow) was observed, and the Log BSAF(S) decreased with the increase of Log K(ow).

  4. Use of trophic magnification factors and related measures to characterize bioaccumulation potential of chemicals.

    PubMed

    Conder, Jason M; Gobas, Frank A P C; Borgå, Katrine; Muir, Derek C G; Powell, David E

    2012-01-01

    Recent technical workgroups have concluded that trophic magnification factors (TMFs) are useful in characterizing the bioaccumulation potential of a chemical, because TMFs provide a holistic measure of biomagnification in food webs. The objectives of this article are to provide a critical analysis of the application of TMFs for regulatory screening for bioaccumulation potential, and to discuss alternative methods for supplementing TMFs and assessing biomagnification in cases where insufficient data are available to determine TMFs. The general scientific consensus is that chemicals are considered bioaccumulative if they exhibit a TMF > 1. However, comparison of study-derived TMF estimates to this threshold value should be based on statistical analyses such that variability is quantified and false positive and false negative errors in classification of bioaccumulation potential are minimized. An example regulatory decision-making framework is presented to illustrate the use of statistical power analyses to minimize assessment errors. Suggestions for considering TMF study designs and TMFs obtained from multiple studies are also provided. Alternative bioaccumulation metrics are reviewed for augmenting TMFs and for substituting in situations in which field data for deriving TMFs are unavailable. Field-derived, trophic level-normalized biomagnification factors (BMF(TL) s), biota-sediment accumulation factors (BSAF(TL) s), and bioaccumulation factors (BAF(TL) s) are recommended if data are available, because these measures are most closely related to the biomagnification processes characterized by TMFs. Field- and laboratory-derived BAFs and bioconcentration factors are generally less accurate in predicting biomagnification. However, bioconcentration factors and BAFs remain useful for characterizing bioaccumulation as a result of the transfer of chemicals from abiotic environmental compartments to lower trophic levels. Modeling that incorporates available laboratory

  5. Factors Regulating the Accumulation and Spatial Distribution of the Emerging Contaminant Triclosan in the Sediments of an Urbanized Estuary: Greenwich Bay, Rhode Island, USA

    EPA Science Inventory

    Increase in the use of personal care products (PCPs) has resulted in the release and accumulation of a diverse assemblage of emerging chemicals in the environment. Triclosan (TCS) is an antimicrobial compound being increasingly used in PCPs over the last 40 years, and as a resul...

  6. Inhibition of the host proteasome facilitates papaya ringspot virus accumulation and proteosomal catalytic activity is modulated by viral factor HcPro.

    PubMed

    Sahana, Nandita; Kaur, Harpreet; Basavaraj; Tena, Fatima; Jain, Rakesh Kumar; Palukaitis, Peter; Canto, Tomas; Praveen, Shelly

    2012-01-01

    The ubiquitin/26S proteasome system plays an essential role not only in maintaining protein turnover, but also in regulating many other plant responses, including plant-pathogen interactions. Previous studies highlighted different roles of the 20S proteasome in plant defense during virus infection, either indirectly through viral suppressor-mediated degradation of Argonaute proteins, affecting the RNA interference pathway, or directly through modulation of the proteolytic and RNase activity of the 20S proteasome, a component of the 20S proteasome, by viral proteins, affecting the levels of viral proteins and RNAs. Here we show that MG132, a cell permeable proteasomal inhibitor, caused an increase in papaya ringspot virus (PRSV) accumulation in its natural host papaya (Carica papaya). We also show that the PRSV HcPro interacts with the papaya homologue of the Arabidopsis PAA (α1 subunit of the 20S proteasome), but not with the papaya homologue of Arabidopsis PAE (α5 subunit of the 20S proteasome), associated with the RNase activity, although the two 20S proteasome subunits interacted with each other. Mutated forms of PRSV HcPro showed that the conserved KITC54 motif in the N-terminal domain of HcPro was necessary for its binding to PAA. Co-agroinfiltration assays demonstrated that HcPro expression mimicked the action of MG132, and facilitated the accumulation of bothtotal ubiquitinated proteins and viral/non-viral exogenous RNA in Nicotiana benthamiana leaves. These effects were not observed by using an HcPro mutant (KITS54), which impaired the HcPro - PAA interaction. Thus, the PRSV HcPro interacts with a proteasomal subunit, inhibiting the action of the 20S proteasome, suggesting that HcPro might be crucial for modulating its catalytic activities in support of virus accumulation.

  7. The relevance of temporal and organ specific factors on metals accumulation and biochemical effects in feral fish (Liza aurata) under a moderate contamination scenario.

    PubMed

    Pereira, Patrícia; de Pablo, Hilda; Pacheco, Mário; Vale, Carlos

    2010-07-01

    Moderate contamination scenarios are nowadays challenging ecotoxicologists. An investigative biomonitoring study was performed under those environmental conditions (Obidos lagoon, Portugal) focused on oxidative stress and accumulated metals in Liza aurata liver and kidney, also examining winter-summer variations and organ-specificities. Three sites were surveyed: Barrosa; Bom-Sucesso; Middle lagoon. The higher metal availability at Barrosa (in water and sediment) was reflected in both organ burdens, though liver was more responsive. Oxidative stress (both organs) pointed to a pro-oxidant challenge at Barrosa (both seasons), reinforced by a general stress index. In winter, oxidative stress at Barrosa was related with accumulated metals in both organs, while in summer this cause-effect relationship was only established for kidney since changes in liver were linked with non-contaminant related variables. Winter-summer variations were outstanding in liver and kidney oxidative stress endpoints, pointing to the relevance of considering distinct seasons and organs in the assessment of moderately contaminated systems.

  8. Detection of long-term trends in carbon accumulation by forests in Northeastern U. S. and determination of causal factors: Final report

    SciTech Connect

    J. William Munger; Steven C. Wofsy; David R. Foster

    2012-01-31

    The overall project goal was to quantify the trends and variability for Net ecosystem exchange of CO{sub 2}, H{sub 2}O, and energy by northeastern forests, with particular attention to the role of succession, differences in species composition, legacies of past land use, and disturbances. Measurements included flux measurements and observations of biomass accumulation using ecosystem modeling as a framework for data interpretation. Continuation of the long-term record at the Environmental Measurement Site (EMS) Tower was a priority. The final quality-assured CO{sub 2}-flux data now extend through 2010. Data through 2011 are collected but not yet finalized. Biomass observations on the plot array centered on the tower are extended to 2011. Two additional towers in a hemlock stand (HEM) and a younger deciduous stand (LPH) complement the EMS tower by focusing on stands with different species composition or age distribution and disturbance history, but comparable climate and soil type. Over the period since 1993 the forest has added 24.4 Mg-C ha{sup -1} in the living trees. Annual net carbon uptake had been increasing from about 2 Mg-C ha{sup -1}y{sup -1} in the early 1990s to nearly 6 Mg-C ha{sup -1}y{sup -1} by 2008, but declined in 2009-2010. We attribute the increasing carbon uptake to a combination of warmer temperatures, increased photosynthetic efficiency, and increased influence by subcanopy hemlocks that are active in the early spring and late autumn when temperatures are above freezing but the deciduous canopy is bare. Not all of the increased carbon accumulation was found in woody biomass. Results from a study using data to optimize parameters in an ecosystem process model indicate that significant changes in model parameters for photosynthetic capacity and shifts in allocation to slow cycling soil organic matter are necessary for the model to match the observed trends. The emerging working hypothesis is that the pattern of increasing carbon uptake over the

  9. Bioaccumulation of polycyclic aromatic hydrocarbons, polychlorinated biphenyls and hexachlorobenzene by three Arctic benthic species from Kongsfjorden (Svalbard, Norway).

    PubMed

    Szczybelski, Ariadna S; van den Heuvel-Greve, Martine J; Kampen, Tineke; Wang, Chenwen; van den Brink, Nico W; Koelmans, Albert A

    2016-11-15

    The predicted expansion of oil and gas (O&G) activities in the Arctic urges for a better understanding of impacts of these activities in this region. Here we investigated the influence of location, feeding strategy and animal size on the bioaccumulation of Polycyclic Aromatic Hydrocarbons (PAHs), Polychlorinated Biphenyls (PCBs) and Hexachlorobenzene (HCB) by three Arctic benthic species in Kongsfjorden (Svalbard, Norway). No toxicity was expected based on biota PAH critical body residues. Biota PCB levels were mainly below limit of detection, whereas samples were moderately polluted by HCB. PAH concentrations in biota and Biota Sediment Accumulation Factors (BSAFs) were generally higher in Blomstrandhalvøya than in Ny-Ålesund, which was explained by a higher abundance of black carbon in Ny-Ålesund harbour. BSAFs differed significantly among species and stations. We conclude that contaminant body residues are a less variable and more straightforward monitoring parameter than sediment concentrations or BSAFs in Arctic benthos.

  10. Stability of 2',3' and 3',5' cyclic nucleotides in formamide and in water: a theoretical insight into the factors controlling the accumulation of nucleic acid building blocks in a prebiotic pool.

    PubMed

    Cassone, Giuseppe; Šponer, Jiří; Saija, Franz; Di Mauro, Ernesto; Marco Saitta, A; Šponer, Judit E

    2017-01-18

    Synthesis of the first RNAs represents one of the cornerstones of the emergence of life. Recent studies demonstrated powerful scenarios of prebiotic synthesis of cyclic nucleotides in aqueous and formamide environments. This raised a question about their thermodynamic stability, a decisive factor determining their accumulation in a prebiotic pool. Here we performed ab initio molecular dynamics simulations at various temperatures in formamide and water to study the relative stabilities of the 2',3' and 3',5' isomers of cyclic nucleotides. The computations show that in an aqueous environment 2',3' cyclic nucleotides are more stable than their 3',5' counterparts at all temperatures up to the boiling point. In contrast, in formamide higher temperatures favor the accumulation of the 3',5' cyclic form, whereas below about 400 K the 2',3' cyclic form becomes more stable. The latter observation is consistent with a formamide-based origin scenario, suggesting that 3',5' cyclic nucleotides accumulated at higher temperatures subsequently allowed oligomerization reactions after fast cooling to lower temperatures. A statistical analysis of the geometrical parameters of the solutes indicates that thermodynamics of cyclic nucleotides in aqueous and formamide environments are dictated by the floppiness of the molecules rather than by the ring strain of the cyclic phosphodiester linkages.

  11. Bioaccumulation of perfluorinated carboxylates and sulfonates and polychlorinated biphenyls in laboratory-cultured Hexagenia spp., Lumbriculus variegatus and Pimephales promelas from field-collected sediments.

    PubMed

    Prosser, R S; Mahon, K; Sibley, P K; Poirier, D; Watson-Leung, T

    2016-02-01

    Polychlorinated biphenyls (PCBs) and perfluorinated carboxylates and sulfonates (PFASs) are persistent pollutants in sediment that can potentially bioaccumulate in aquatic organisms. The current study investigates variation in the accumulation of PCBs and PFASs in laboratory-cultured Hexagenia spp., Lumbriculus variegatus and Pimephales promelas from contaminated field-collected sediment using 28-day tests. BSAF(lipid) (lipid-normalized biota-sediment accumulation factor) values for total concentration of PCBs were greater in Hexagenia spp. relative to L. variegatus and P. promelas. The distribution of congeners contributing to the total concentration of PCBs in tissue varied among the three species. Trichlorobiphenyl congeners composed the greatest proportion of the total concentration of PCBs in L. variegatus while tetra- and pentabiphenyl congeners dominated in Hexagenia spp. and P. promelas. Perfluorooctane sulfonate (PFOS) was present in all three species at concentrations greater than all other PFASs analyzed. Hexagenia spp. also produced the greatest BSAF(lipid) and BSAF(ww) (non-lipid-normalized biota-sediment accumulation factor) values for PFOS relative to the other two species. However, this was not the case for all PFASs. The trend of BSAF values and number of carbon atoms in the perfluoroalkyl chain of perfluorinated carboxylates varied among the three species but was similar for perfluorinated sulfonates. Differences in the dominant pathways of exposure (e.g., water, sediment ingestion) likely explain a large proportion of the variation in accumulation observed across the three species.

  12. Chinese herbal medicine Yi-Gan-San decreases the lipid accumulation in mouse 3T3-L1 adipocytes by modulating the activities of transcription factors SREBP-1c and FoxO1.

    PubMed

    Izumi, Masayuki; Seki, Takashi; Iwasaki, Koh; Sakamoto, Kazuichi

    2009-09-01

    Abnormal lipid metabolism in adipose tissue is closely related to the occurrence and progression of a wide variety of metabolic syndromes. We have analyzed the pharmacological effects of Chinese herbal medicines on cell differentiation and lipid metabolism in adipocytes. Yi-Gan-San (YGS) is a Chinese herbal medicine that is effective in treating the behavioral and psychological symptoms of dementia; however, its physiological mechanism remains unclear. We analyzed the effects of YGS on lipid accumulation in mouse 3T3-L1 adipocytes. Adipocyte differentiation was induced in mouse 3T3-L1 preadipocytes by treatment with the mixture of dexamethasone, 3-iso-butyl-1-methylxanthine, and insulin, and cells were cultured for 8 days with Chinese herbal medicines, including YGS. YGS effectively reduced the lipid accumulation in the differentiated 3T3-L1 cells in a dose-dependent manner, but had no effect on cell viability. YGS also reduced the activity of glycerol-3-phosphate dehydrogenase, an enzyme involved in lipid synthesis. In contrast, YGS gave no noticeable effect on glucose uptake and fatty acid uptake in the differentiated 3T3-L1 cells. Moreover, we established the stably transfected 3T3-L1 cell lines, each of which expresses the luciferase reporter gene under the control of sterol regulatory element-binding protein-1c (SREBP-1c) or FoxO1. SREBP-1c is a transcription factor involved in fatty acid synthesis, and FoxO1 is a forkhead-type transcription factor involved in adipocyte differentiation. Using these cell lines, we showed that YGS reduced the transcriptional activity of SREBP-1c, whereas YGS increased the activity of FoxO1. Thus, YGS may suppress lipid synthesis and fat accumulation in adipocytes through modulating the activities of SREBP-1c and FoxO1.

  13. Accumulation of genome-specific transcripts, transcription factors and phytohormonal regulators during early stages of fiber cell development in allotetraploid cotton.

    PubMed

    Samuel Yang, S; Cheung, Foo; Lee, Jinsuk J; Ha, Misook; Wei, Ning E; Sze, Sing-Hoi; Stelly, David M; Thaxton, Peggy; Triplett, Barbara; Town, Christopher D; Jeffrey Chen, Z

    2006-09-01

    Gene expression during the early stages of fiber cell development and in allopolyploid crops is poorly understood. Here we report computational and expression analyses of 32 789 high-quality ESTs derived from Gossypium hirsutum L. Texas Marker-1 (TM-1) immature ovules (GH_TMO). The ESTs were assembled into 8540 unique sequences including 4036 tentative consensus sequences (TCs) and 4504 singletons, representing approximately 15% of the unique sequences in the cotton EST collection. Compared with approximately 178 000 existing ESTs derived from elongating fibers and non-fiber tissues, GH_TMO ESTs showed a significant increase in the percentage of genes encoding putative transcription factors such as MYB and WRKY and genes encoding predicted proteins involved in auxin, brassinosteroid (BR), gibberellic acid (GA), abscisic acid (ABA) and ethylene signaling pathways. Cotton homologs related to MIXTA, MYB5, GL2 and eight genes in the auxin, BR, GA and ethylene pathways were induced during fiber cell initiation but repressed in the naked seed mutant (N1N1) that is impaired in fiber formation. The data agree with the known roles of MYB and WRKY transcription factors in Arabidopsis leaf trichome development and the well-documented phytohormonal effects on fiber cell development in immature cotton ovules cultured in vitro. Moreover, the phytohormonal pathway-related genes were induced prior to the activation of MYB-like genes, suggesting an important role of phytohormones in cell fate determination. Significantly, AA sub-genome ESTs of all functional classifications including cell-cycle control and transcription factor activity were selectively enriched in G. hirsutum L., an allotetraploid derived from polyploidization between AA and DD genome species, a result consistent with the production of long lint fibers in AA genome species. These results suggest general roles for genome-specific, phytohormonal and transcriptional gene regulation during the early stages of fiber

  14. A weighted relative difference accumulation algorithm for dynamic metabolomics data: long-term elevated bile acids are risk factors for hepatocellular carcinoma

    PubMed Central

    Zhang, Weijian; Zhou, Lina; Yin, Peiyuan; Wang, Jinbing; Lu, Xin; Wang, Xiaomei; Chen, Jianguo; Lin, Xiaohui; Xu, Guowang

    2015-01-01

    Dynamic metabolomics studies can provide a systematic view of the metabolic trajectory during disease development and drug treatment and reveal the nature of biological processes at metabolic level. To extract important information in a systematic time dimension rather than at isolated time points, a weighted method based on the means and variations along the time points was proposed and first applied to previously published rat model data. The method was subsequently extended and applied to prospective metabolomics data analysis of hepatocellular carcinoma (HCC). Permutation was employed for noise filtering and false discovery rate (FDR) was used for parameter optimization during the feature selection. Long-term elevated serum bile acids were identified as risk factors for HCC development. PMID:25757957

  15. Icariin attenuates high glucose-induced type IV collagen and fibronectin accumulation in glomerular mesangial cells by inhibiting transforming growth factor-β production and signalling through G protein-coupled oestrogen receptor 1.

    PubMed

    Li, Yi-Chen; Ding, Xuan-Sheng; Li, Hui-Mei; Zhang, Cheng

    2013-09-01

    Icariin has been shown to attenuate diabetic nephropathy in rats by decreasing transforming growth factor-β (TGF-β) and type IV collagen expression, but its mode of action in glomerular mesangial cells is uncertain. The present study aimed to investigate the effect of icariin on excess mesangial type IV collagen and fibronectin accumulation induced by high glucose, and to determine the mechanism underlying its protective effects. Under high-glucose conditions, icariin diminished type IV collagen and fibronectin accumulation, as well as TGF-β production in human and rat mesangial cells. Mesangial cells treated with icariin after TGF-β1 exposure expressed less type IV collagen and fibronectin than those without icariin treatment, suggesting inhibition by icariin of TGF-β1 downstream pathways. On TGF-β1 stimulation, icariin inhibited TGF-β canonical Smad signalling and extracellular signal-regulated kinase (ERK)1/2 signalling by decreasing Smad2/3 and ERK1/2 phosphorylation in a dose-dependent manner. U0126, which blocked the ERK1/2 pathway, exerted an additive effect on the icariin suppression of type IV collagen and fibronectin expression, enhancing the beneficial effects of icariin. The G protein-coupled oestrogen receptor 1 (GPER) antagonist, G-15, abolished the icariin-induced inhibition of type IV collagen, and fibronectin overproduction and TGF-β signalling. Treatment of cells with fulvestrant, a downregulator of the oestrogen receptor, enhanced the action of icariin. In conclusion, icariin decreased type IV collagen and fibronectin accumulation induced by high glucose in mesangial cells by inhibiting TGF-β production, as well as Smad and ERK signalling in a GPER-dependent manner.

  16. Organotin compounds in surface sediments of the Southern Baltic coastal zone: a study on the main factors for their accumulation and degradation.

    PubMed

    Filipkowska, Anna; Kowalewska, Grażyna; Pavoni, Bruno

    2014-02-01

    Sediment samples were collected in the Gulf of Gdańsk, and the Vistula and Szczecin Lagoons-all located in the coastal zone of the Southern Baltic Sea-just after the total ban on using harmful organotins in antifouling paints on ships came into force, to assess their butyltin and phenyltin contamination extent. Altogether, 26 sampling stations were chosen to account for different potential exposure to organotin pollution and environmental conditions: from shallow and well-oxygenated waters, shipping routes and river mouths, to deep and anoxic sites. Additionally, the organic carbon content, pigment content, and grain size of all the sediment samples were determined, and some parameters of the near-bottom water (oxygen content, salinity, temperature) were measured as well. Total concentrations of butyltin compounds ranged between 2 and 182 ng Sn g(-1) d.w., whereas phenyltins were below the detection limit. Sediments from the Gulf of Gdańsk and Vistula Lagoon were found moderately contaminated with tributyltin, whereas those from the Szczecin Lagoon were ranked as highly contaminated. Butyltin degradation indices prove a recent tributyltin input into the sediments adjacent to sites used for dumping for dredged harbor materials and for anchorage in the Gulf of Gdańsk (where two big international ports are located), and into those collected in the Szczecin Lagoon. Essential factors affecting the degradation and distribution of organotins, based on significant correlations between butyltins and environmental variables, were found in the study area.

  17. Altered metabolite accumulation in tomato fruits by coexpressing a feedback-insensitive AroG and the PhODO1 MYB-type transcription factor.

    PubMed

    Xie, Qingjun; Liu, Zhongyuan; Meir, Sagit; Rogachev, Ilana; Aharoni, Asaph; Klee, Harry J; Galili, Gad

    2016-12-01

    Targeted manipulation of phenylalanine (Phe) synthesis is a potentially powerful strategy to boost biologically and economically important metabolites, including phenylpropanoids, aromatic volatiles and other specialized plant metabolites. Here, we use two transgenes to significantly increase the levels of aromatic amino acids, tomato flavour-associated volatiles and antioxidant phenylpropanoids. Overexpression of the petunia MYB transcript factor, ODORANT1 (ODO1), combined with expression of a feedback-insensitive E. coli 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (AroG), altered the levels of multiple primary and secondary metabolites in tomato fruit, boosting levels of multiple secondary metabolites. Our results indicate that coexpression of AroG and ODO1 has a dual effect on Phe and related biosynthetic pathways: (i) positively impacting tyrosine (Tyr) and antioxidant related metabolites, including ones derived from coumaric acid and ferulic acid; (ii) negatively impacting other downstream secondary metabolites of the Phe pathway, including kaempferol-, naringenin- and quercetin-derived metabolites, as well as aromatic volatiles. The metabolite profiles were distinct from those obtained with either single transgene. In addition to providing fruits that are increased in flavour and nutritional chemicals, coexpression of the two genes provides insights into regulation of branches of phenylpropanoid metabolic pathways.

  18. Biochemical and ultrastructural processing of (/sup 125/I)epidermal growth factor in rat epidermis and hair follicles: accumulation of nuclear label

    SciTech Connect

    Green, M.R.; Mycock, C.; Smith, C.G.; Couchman, J.R.

    1987-03-01

    Although the intracellular ultrastructural processing of epidermal growth factor (EGF) and its receptor have been described in cell culture systems, very few studies have examined this phenomenon in intact tissues. We have examined the ultrastructural and biochemical handling of (/sup 125/I)EGF in the epidermis and hair follicle bulb of intact, viable, 3- to 5-day-old rat skin the EGF receptor distribution of which has already been documented and in which EGF has been shown to be biologically active. After incubation of explants with 10 nM (/sup 125/I)EGF for 2.5 h at 25 degrees or 37 degrees C, radiolabel was detected over the basal cells of the epidermis and hair follicle outer root sheath, confirming previous light microscope observations. More specifically, silver grains were observed near coated and uncoated plasma membrane and coated membrane invaginations, Golgi apparatus, lysosomal structures, and nuclei. Sodium azide inhibited internalization of label, whereas a series of lysosomal inhibitors (chloroquine, monensin, and iodoacetamide) caused a slight increase in silver grains associated with lysosomal vesicles and a decrease in nuclear label. Biochemical analysis indicated that greater than 35% of radioactivity following incubation at 37 degrees C was in the form of degraded (/sup 125/I)EGF fragments and that inclusion of chloroquine, monensin, and iodoacetamide reduced this value to 20.8%, 8.6%, and 4.0%, respectively. In addition, chloramine T-prepared (/sup 125/I)EGF was found to be covalently cross-linked with low efficiency to a protein having the molecular weight of the EGF receptor. These data are discussed in the light of the effects of EGF on epithelial cell proliferation in skin.

  19. Risk assessment of arsenic and other metals via atmospheric particles, and effects of atmospheric exposure and other demographic factors on their accumulations in human scalp hair in urban area of Guangzhou, China.

    PubMed

    Huang, Minjuan; Chen, Xunwen; Shao, Dingding; Zhao, Yinge; Wang, Wei; Wong, Ming Hung

    2014-04-01

    Eighty-eight scalp hair samples were collected from Guangzhou (GZ) urban population (15-65 years) to investigate the accumulation of As and other metals (Cr, Mn, Ni, Cu, Zn, Cd, Sn, Sb, Hg and Pb). Demographic information, including body weight, height, age, gender, habits of smoking and drinking, types of drinking water, duration of stay in GZ, days of stay in GZ per year (days/year), and hours spent in indoor environment per day (h/day), were also recorded during hair sampling to refine the uncertainty of risk assessment derived from exposures to elements via dust and airborne particles. No significant non-carcinogenic risk was found. However, the cancer risks of Cr and As for both ingestion and inhalation exceeded the most tolerable regulated level (1.0×10(-6)). The environmental exposures to urban dust and airborne particles were observed significantly correlated to accumulations of Cd (R=0.306, p=0.005) and Ni (R=0.333, p=0.002) in scalp hair. Furthermore, the hair burden of elements was also significantly (p<0.05) dependent on gender (Mn, Ni, Zn, As, Sn and Hg), age (Cr, As, Cd and Hg), duration of stay in GZ (Hg) as well as nutritional and physical status, reflected by BMI and BSA (Cr, Ni, Cd, Sb and Hg). Nutritional and physical status was observed as the exclusive important factor influencing As speciation in human scalp hair. However, habits of smoking and alcohol drinking as well as types of drinking water were not identified as the significant influencing factors on any element (p>0.05).

  20. Long-term intravenous administration of carboxylated single-walled carbon nanotubes induces persistent accumulation in the lungs and pulmonary fibrosis via the nuclear factor-kappa B pathway

    PubMed Central

    Qin, Yue; Li, Suning; Zhao, Gan; Fu, Xuanhao; Xie, Xueping; Huang, Yiyi; Cheng, Xiaojing; Wei, Jinbin; Liu, Huagang; Lai, Zefeng

    2017-01-01

    Numerous studies have demonstrated promising application of single-walled carbon nanotubes (SWNTs) in drug delivery, diagnosis, and targeted therapy. However, the adverse health effects resulting from intravenous injection of SWNTs are not completely understood. Studies have shown that levels of “pristine” or carboxylated carbon nanotubes are very high in mouse lungs after intravenous injection. We hypothesized that long-term and repeated intravenous administration of carboxylated SWNTs (c-SWNTs) can result in persistent accumulation and induce histopathologic changes in rat lungs. Here, c-SWNTs were administered repeatedly to rats via tail-vein injection for 90 days. Long-term intravenous injection of c-SWNTs caused sustained embolization in lung capillaries and granuloma formation. It also induced a persistent inflammatory response that was regulated by the nuclear factor-kappa B signaling pathway, and which resulted in pulmonary fibrogenesis. c-SWNTs trapped within lung capillaries traversed capillary walls and injured alveolar epithelial cells, thereby stimulating production of pro-inflammatory cytokines (tumor necrosis factor-alpha and interleukin-1 beta) and pro-fibrotic growth factors (transforming growth factor-beta 1). Protein levels of type-I and type-III collagens, matrix metalloproteinase-2, and the tissue inhibitor of metalloproteinase-2 were upregulated after intravenous exposure to c-SWNTs as determined by immunohistochemical assays and Western blotting, which suggested collagen deposition and remodeling of the extracellular matrix. These data suggest that chronic and cumulative toxicity of nanomaterials to organs with abundant capillaries should be assessed if such nanomaterials are applied via intravenous administration. PMID:28115845

  1. Extrapolation of Biota-sediment Accumulation Factors

    EPA Science Inventory

    When assessing risks at sites with contaminated sediments, risk assessors need to estimate residues in fish and other aquatic biota based upon the levels of contaminants in the sediments. Unfortunately, risk assessors are often challenged by data limitations, i.e., i) contaminan...

  2. The photomorphogenic factors UV-B RECEPTOR 1, ELONGATED HYPOCOTYL 5, and HY5 HOMOLOGUE are part of the UV-B signalling pathway in grapevine and mediate flavonol accumulation in response to the environment.

    PubMed

    Loyola, Rodrigo; Herrera, Daniela; Mas, Abraham; Wong, Darren Chern Jan; Höll, Janine; Cavallini, Erika; Amato, Alessandra; Azuma, Akifumi; Ziegler, Tobias; Aquea, Felipe; Castellarin, Simone Diego; Bogs, Jochen; Tornielli, Giovanni Battista; Peña-Neira, Alvaro; Czemmel, Stefan; Alcalde, José Antonio; Matus, José Tomás; Arce-Johnson, Patricio

    2016-10-01

    Grapevine (Vitis vinifera L.) is a species well known for its adaptation to radiation. However, photomorphogenic factors related to UV-B responses have not been molecularly characterized. We cloned and studied the role of UV-B RECEPTOR (UVR1), ELONGATED HYPOCOTYL 5 (HY5), and HY5 HOMOLOGUE (HYH) from V. vinifera We performed gene functional characterizations, generated co-expression networks, and tested them in different environmental conditions. These genes complemented the Arabidopsis uvr8 and hy5 mutants in morphological and secondary metabolic responses to radiation. We combined microarray and RNA sequencing (RNA-seq) data with promoter inspections to identify HY5 and HYH putative target genes and their DNA binding preferences. Despite sharing a large set of common co-expressed genes, we found different hierarchies for HY5 and HYH depending on the organ and stress condition, reflecting both co-operative and partially redundant roles. New candidate UV-B gene markers were supported by the presence of HY5-binding sites. These included a set of flavonol-related genes that were up-regulated in a HY5 transient expression assay. We irradiated in vitro plantlets and fruits from old potted vines with high and low UV-B exposures and followed the accumulation of flavonols and changes in gene expression in comparison with non-irradiated conditions. UVR1, HY5, and HYH expression varied with organ, developmental stage, and type of radiation. Surprisingly, UVR1 expression was modulated by shading and temperature in berries, but not by UV-B radiation. We propose that the UV-B response machinery favours berry flavonol accumulation through the activation of HY5 and HYH at different developmental stages at both high and low UV-B exposures.

  3. The photomorphogenic factors UV-B RECEPTOR 1, ELONGATED HYPOCOTYL 5, and HY5 HOMOLOGUE are part of the UV-B signalling pathway in grapevine and mediate flavonol accumulation in response to the environment

    PubMed Central

    Loyola, Rodrigo; Herrera, Daniela; Mas, Abraham; Wong, Darren Chern Jan; Höll, Janine; Cavallini, Erika; Amato, Alessandra; Azuma, Akifumi; Ziegler, Tobias; Aquea, Felipe; Castellarin, Simone Diego; Bogs, Jochen; Tornielli, Giovanni Battista; Peña-Neira, Alvaro; Czemmel, Stefan; Alcalde, José Antonio; Matus, José Tomás; Arce-Johnson, Patricio

    2016-01-01

    Grapevine (Vitis vinifera L.) is a species well known for its adaptation to radiation. However, photomorphogenic factors related to UV-B responses have not been molecularly characterized. We cloned and studied the role of UV-B RECEPTOR (UVR1), ELONGATED HYPOCOTYL 5 (HY5), and HY5 HOMOLOGUE (HYH) from V. vinifera. We performed gene functional characterizations, generated co-expression networks, and tested them in different environmental conditions. These genes complemented the Arabidopsis uvr8 and hy5 mutants in morphological and secondary metabolic responses to radiation. We combined microarray and RNA sequencing (RNA-seq) data with promoter inspections to identify HY5 and HYH putative target genes and their DNA binding preferences. Despite sharing a large set of common co-expressed genes, we found different hierarchies for HY5 and HYH depending on the organ and stress condition, reflecting both co-operative and partially redundant roles. New candidate UV-B gene markers were supported by the presence of HY5-binding sites. These included a set of flavonol-related genes that were up-regulated in a HY5 transient expression assay. We irradiated in vitro plantlets and fruits from old potted vines with high and low UV-B exposures and followed the accumulation of flavonols and changes in gene expression in comparison with non-irradiated conditions. UVR1, HY5, and HYH expression varied with organ, developmental stage, and type of radiation. Surprisingly, UVR1 expression was modulated by shading and temperature in berries, but not by UV-B radiation. We propose that the UV-B response machinery favours berry flavonol accumulation through the activation of HY5 and HYH at different developmental stages at both high and low UV-B exposures. PMID:27543604

  4. Microbial accumulation of uranium, radium, and cesium

    SciTech Connect

    Strandberg, G.W.; Shumate, S.E. II; Parrott, J.R. Jr.; North, S.E.

    1981-05-01

    Diverse microbial species varied considerably in their ability to accumulate uranium, cesium, and radium. Mechanistic differences in uranium uptake by Saccharomyces cerevisiae and Pseudomonas aeruginosa were indicated. S. serevisiae exhibited a slow (hours) surface accumulation of uranium which was subject to environmental factors, while P. aeruginosa accumulated uranium rapidly (minutes) as dense intracellular deposits and did not appear to be affected by environmental parameters. Metabolism was not required for uranium uptake by either organism. Cesium and radium were concentrated to a considerably lesser extent than uranium by the several species tested.

  5. Chimpanzee accumulative stone throwing.

    PubMed

    Kühl, Hjalmar S; Kalan, Ammie K; Arandjelovic, Mimi; Aubert, Floris; D'Auvergne, Lucy; Goedmakers, Annemarie; Jones, Sorrel; Kehoe, Laura; Regnaut, Sebastien; Tickle, Alexander; Ton, Els; van Schijndel, Joost; Abwe, Ekwoge E; Angedakin, Samuel; Agbor, Anthony; Ayimisin, Emmanuel Ayuk; Bailey, Emma; Bessone, Mattia; Bonnet, Matthieu; Brazolla, Gregory; Buh, Valentine Ebua; Chancellor, Rebecca; Cipoletta, Chloe; Cohen, Heather; Corogenes, Katherine; Coupland, Charlotte; Curran, Bryan; Deschner, Tobias; Dierks, Karsten; Dieguez, Paula; Dilambaka, Emmanuel; Diotoh, Orume; Dowd, Dervla; Dunn, Andrew; Eshuis, Henk; Fernandez, Rumen; Ginath, Yisa; Hart, John; Hedwig, Daniela; Ter Heegde, Martijn; Hicks, Thurston Cleveland; Imong, Inaoyom; Jeffery, Kathryn J; Junker, Jessica; Kadam, Parag; Kambi, Mohamed; Kienast, Ivonne; Kujirakwinja, Deo; Langergraber, Kevin; Lapeyre, Vincent; Lapuente, Juan; Lee, Kevin; Leinert, Vera; Meier, Amelia; Maretti, Giovanna; Marrocoli, Sergio; Mbi, Tanyi Julius; Mihindou, Vianet; Moebius, Yasmin; Morgan, David; Morgan, Bethan; Mulindahabi, Felix; Murai, Mizuki; Niyigabae, Protais; Normand, Emma; Ntare, Nicolas; Ormsby, Lucy Jayne; Piel, Alex; Pruetz, Jill; Rundus, Aaron; Sanz, Crickette; Sommer, Volker; Stewart, Fiona; Tagg, Nikki; Vanleeuwe, Hilde; Vergnes, Virginie; Willie, Jacob; Wittig, Roman M; Zuberbuehler, Klaus; Boesch, Christophe

    2016-02-29

    The study of the archaeological remains of fossil hominins must rely on reconstructions to elucidate the behaviour that may have resulted in particular stone tools and their accumulation. Comparatively, stone tool use among living primates has illuminated behaviours that are also amenable to archaeological examination, permitting direct observations of the behaviour leading to artefacts and their assemblages to be incorporated. Here, we describe newly discovered stone tool-use behaviour and stone accumulation sites in wild chimpanzees reminiscent of human cairns. In addition to data from 17 mid- to long-term chimpanzee research sites, we sampled a further 34 Pan troglodytes communities. We found four populations in West Africa where chimpanzees habitually bang and throw rocks against trees, or toss them into tree cavities, resulting in conspicuous stone accumulations at these sites. This represents the first record of repeated observations of individual chimpanzees exhibiting stone tool use for a purpose other than extractive foraging at what appear to be targeted trees. The ritualized behavioural display and collection of artefacts at particular locations observed in chimpanzee accumulative stone throwing may have implications for the inferences that can be drawn from archaeological stone assemblages and the origins of ritual sites.

  6. Accumulation of the planets

    NASA Technical Reports Server (NTRS)

    Wetherill, G. W.

    1987-01-01

    In modeling the accumulation of planetesimals into planets, it is appropriate to distinguish between two stages: an early stage, during which approximately 10 km diameter planetesimals accumulate locally to form bodies approximate 10 to the 25th g in mass; and a later stage in which the approximately 10 to the 25th g planetesimals accumulate into the final planets. In the terrestrial planet region, an initial planetesimal swarm corresponding to the critical mass of dust layer gravitational instabilities is considered. In order to better understand the accumulation history of Mercury-sized bodies, 19 Monte-Carlo simulations of terrestrial planet growth were calculated. A Monte Carlo technique was used to investigate the orbital evolution of asteroidal collision debris produced interior to 2.6 AU. It was found that there are two regions primarily responsible for production of Earth-crossing meteoritic material and Apollo objects. The same techniques were extended to include the origin of Earth-approaching asteroidal bodies. It is found that these same two resonant mechanisms predict a steady-state number of Apollo-Amor about 1/2 that estimated based on astronomical observations.

  7. Chimpanzee accumulative stone throwing

    PubMed Central

    Kühl, Hjalmar S.; Kalan, Ammie K.; Arandjelovic, Mimi; Aubert, Floris; D’Auvergne, Lucy; Goedmakers, Annemarie; Jones, Sorrel; Kehoe, Laura; Regnaut, Sebastien; Tickle, Alexander; Ton, Els; van Schijndel, Joost; Abwe, Ekwoge E.; Angedakin, Samuel; Agbor, Anthony; Ayimisin, Emmanuel Ayuk; Bailey, Emma; Bessone, Mattia; Bonnet, Matthieu; Brazolla, Gregory; Buh, Valentine Ebua; Chancellor, Rebecca; Cipoletta, Chloe; Cohen, Heather; Corogenes, Katherine; Coupland, Charlotte; Curran, Bryan; Deschner, Tobias; Dierks, Karsten; Dieguez, Paula; Dilambaka, Emmanuel; Diotoh, Orume; Dowd, Dervla; Dunn, Andrew; Eshuis, Henk; Fernandez, Rumen; Ginath, Yisa; Hart, John; Hedwig, Daniela; Ter Heegde, Martijn; Hicks, Thurston Cleveland; Imong, Inaoyom; Jeffery, Kathryn J.; Junker, Jessica; Kadam, Parag; Kambi, Mohamed; Kienast, Ivonne; Kujirakwinja, Deo; Langergraber, Kevin; Lapeyre, Vincent; Lapuente, Juan; Lee, Kevin; Leinert, Vera; Meier, Amelia; Maretti, Giovanna; Marrocoli, Sergio; Mbi, Tanyi Julius; Mihindou, Vianet; Moebius, Yasmin; Morgan, David; Morgan, Bethan; Mulindahabi, Felix; Murai, Mizuki; Niyigabae, Protais; Normand, Emma; Ntare, Nicolas; Ormsby, Lucy Jayne; Piel, Alex; Pruetz, Jill; Rundus, Aaron; Sanz, Crickette; Sommer, Volker; Stewart, Fiona; Tagg, Nikki; Vanleeuwe, Hilde; Vergnes, Virginie; Willie, Jacob; Wittig, Roman M.; Zuberbuehler, Klaus; Boesch, Christophe

    2016-01-01

    The study of the archaeological remains of fossil hominins must rely on reconstructions to elucidate the behaviour that may have resulted in particular stone tools and their accumulation. Comparatively, stone tool use among living primates has illuminated behaviours that are also amenable to archaeological examination, permitting direct observations of the behaviour leading to artefacts and their assemblages to be incorporated. Here, we describe newly discovered stone tool-use behaviour and stone accumulation sites in wild chimpanzees reminiscent of human cairns. In addition to data from 17 mid- to long-term chimpanzee research sites, we sampled a further 34 Pan troglodytes communities. We found four populations in West Africa where chimpanzees habitually bang and throw rocks against trees, or toss them into tree cavities, resulting in conspicuous stone accumulations at these sites. This represents the first record of repeated observations of individual chimpanzees exhibiting stone tool use for a purpose other than extractive foraging at what appear to be targeted trees. The ritualized behavioural display and collection of artefacts at particular locations observed in chimpanzee accumulative stone throwing may have implications for the inferences that can be drawn from archaeological stone assemblages and the origins of ritual sites. PMID:26923684

  8. Hypoxia-inducible factor 1 mediates hypoxia-induced cardiomyocyte lipid accumulation by reducing the DNA binding activity of peroxisome proliferator-activated receptor {alpha}/retinoid X receptor

    SciTech Connect

    Belanger, Adam J.; Luo Zhengyu; Vincent, Karen A.; Akita, Geoffrey Y.; Cheng, Seng H.; Gregory, Richard J.; Jiang Canwen

    2007-12-21

    In response to cellular hypoxia, cardiomyocytes adapt to consume less oxygen by shifting ATP production from mitochondrial fatty acid {beta}-oxidation to glycolysis. The transcriptional activation of glucose transporters and glycolytic enzymes by hypoxia is mediated by hypoxia-inducible factor 1 (HIF-1). In this study, we examined whether HIF-1 was involved in the suppression of mitochondrial fatty acid {beta}-oxidation in hypoxic cardiomyocytes. We showed that either hypoxia or adenovirus-mediated expression of a constitutively stable hybrid form (HIF-1{alpha}/VP16) suppressed mitochondrial fatty acid metabolism, as indicated by an accumulation of intracellular neutral lipid. Both treatments also reduced the mRNA levels of muscle carnitine palmitoyltransferase I which catalyzes the rate-limiting step in the mitochondrial import of fatty acids for {beta}-oxidation. Furthermore, adenovirus-mediated expression of HIF-1{alpha}/VP16 in cardiomyocytes under normoxic conditions also mimicked the reduction in the DNA binding activity of peroxisome proliferator-activated receptor {alpha} (PPAR{alpha})/retinoid X receptor (RXR), in the presence or absence of a PPAR{alpha} ligand. These results suggest that HIF-1 may be involved in hypoxia-induced suppression of fatty acid metabolism in cardiomyocytes by reducing the DNA binding activity of PPAR{alpha}/RXR.

  9. Local administration of granulocyte macrophage colony-stimulating factor induces local accumulation of dendritic cells and antigen-specific CD8+ T cells and enhances dendritic cell cross-presentation.

    PubMed

    Lee, Sung-Jong; Song, Liwen; Yang, Ming-Chieh; Mao, Chih-Ping; Yang, Benjamin; Yang, Andrew; Jeang, Jessica; Peng, Shiwen; Wu, T-C; Hung, Chien-Fu

    2015-03-24

    Immunotherapy has emerged as a promising treatment strategy for the control of HPV-associated malignancies. Various therapeutic HPV vaccines have elicited potent antigen-specific CD8+ T cell mediated antitumor immune responses in preclinical models and are currently being tested in several clinical trials. Recent evidence indicates the importance of local immune activation, and higher number of immune cells in the site of lesion correlates with positive prognosis. Granulocyte macrophage colony-stimulating factor (GMCSF) has been reported to posses the ability to induce migration of antigen presentation cells and CD8+ T cells. Therefore, in the current study, we employ a combination of systemic therapeutic HPV DNA vaccination with local GMCSF application in the TC-1 tumor model. We show that intramuscular vaccination with CRT/E7 DNA followed by GMCSF intravaginal administration effectively controls cervicovaginal TC-1 tumors in mice. Furthermore, we observe an increase in the accumulation of E7-specific CD8+ T cells and dendritic cells in vaginal tumors following the combination treatment. In addition, we show that GMCSF induces activation and maturation in dendritic cells and promotes antigen cross-presentation. Our results support the clinical translation of the combination treatment of systemic therapeutic vaccination followed by local GMCSF administration as an effective strategy for tumor treatment.

  10. Accumulation of nickel in transgenic tobacco

    NASA Astrophysics Data System (ADS)

    Sidik, Nik Marzuki; Othman, Noor Farhan

    2013-11-01

    The accumulation of heavy metal Ni in the roots and leaves of four T1 transgenic lines of tobacco (T(1)20E, T(1)24C, T(1)18B1 and T(1)20B) expressing eiMT1 from E.indica was assessed. The aim of the study was to investigate the level of Ni accumulation in the leaves and roots of each transgenic lines and to evaluate the eligibility of the plants to be classified as a phytoremediation agent. All of the transgenic lines showed different ability in accumulating different metals and has translocation factor (TF) less than 1 (TF<1) at all levels of metal treatment. Among the 4 transgenic lines, transgenic line T(1)24C showed the highest accumulation of Ni (251.9 ± 0.014 mg/kg) and the lowest TF value (TFT(1)24C=0.0875) at 60 ppm Ni.

  11. Control of helium accumulation

    SciTech Connect

    Varadarajan, V.; Miley, G.H.

    1990-01-01

    The fishbone like oscillations in ignited tokamaks are addressed in an exploratory manner. The effects of the strong m = 1 oscillations and the weak high-frequency oscillations are examined in order to explore the feasibility of utilizing these oscillations for alpha accumulation control. The prospects of achieving small scale continuous alpha removal from the plasma center by mild fishbone-like oscillations are examined.

  12. Selenium accumulation by plants

    PubMed Central

    White, Philip J.

    2016-01-01

    Background Selenium (Se) is an essential mineral element for animals and humans, which they acquire largely from plants. The Se concentration in edible plants is determined by the Se phytoavailability in soils. Selenium is not an essential element for plants, but excessive Se can be toxic. Thus, soil Se phytoavailability determines the ecology of plants. Most plants cannot grow on seleniferous soils. Most plants that grow on seleniferous soils accumulate <100 mg Se kg–1 dry matter and cannot tolerate greater tissue Se concentrations. However, some plant species have evolved tolerance to Se, and commonly accumulate tissue Se concentrations >100 mg Se kg–1 dry matter. These plants are considered to be Se accumulators. Some species can even accumulate Se concentrations of 1000–15 000 mg Se kg–1 dry matter and are called Se hyperaccumulators. Scope This article provides an overview of Se uptake, translocation and metabolism in plants and highlights the possible genetic basis of differences in these between and within plant species. The review focuses initially on adaptations allowing plants to tolerate large Se concentrations in their tissues and the evolutionary origin of species that hyperaccumulate Se. It then describes the variation in tissue Se concentrations between and within angiosperm species and identifies genes encoding enzymes limiting the rates of incorporation of Se into organic compounds and chromosomal loci that might enable the development of crops with greater Se concentrations in their edible portions. Finally, it discusses transgenic approaches enabling plants to tolerate greater Se concentrations in the rhizosphere and in their tissues. Conclusions The trait of Se hyperaccumulation has evolved several times in separate angiosperm clades. The ability to tolerate large tissue Se concentrations is primarily related to the ability to divert Se away from the accumulation of selenocysteine and selenomethionine, which might be incorporated

  13. Factors determining the stability, size distribution, and cellular accumulation of small, monodisperse chitosan nanoparticles as candidate vectors for anticancer drug delivery: application to the passive encapsulation of [14C]-doxorubicin

    PubMed Central

    Masarudin, Mas Jaffri; Cutts, Suzanne M; Evison, Benny J; Phillips, Don R; Pigram, Paul J

    2015-01-01

    Development of parameters for the fabrication of nanosized vectors is pivotal for its successful administration in therapeutic applications. In this study, homogeneously distributed chitosan nanoparticles (CNPs) with diameters as small as 62 nm and a polydispersity index (PDI) of 0.15 were synthesized and purified using a simple, robust method that was highly reproducible. Nanoparticles were synthesized using modified ionic gelation of the chitosan polymer with sodium tripolyphosphate. Using this method, larger aggregates were mechanically isolated from single particles in the nanoparticle population by selective efficient centrifugation. The presence of disaggregated monodisperse nanoparticles was confirmed using atomic force microscopy. Factors such as anions, pH, and concentration were found to affect the size and stability of nanoparticles directly. The smallest nanoparticle population was ∼62 nm in hydrodynamic size, with a low PDI of 0.15, indicating high particle homogeneity. CNPs were highly stable and retained their monodisperse morphology in serum-supplemented media in cell culture conditions for up to 72 hours, before slowly degrading over 6 days. Cell viability assays demonstrated that cells remained viable following a 72-hour exposure to 1 mg/mL CNPs, suggesting that the nanoparticles are well tolerated and highly suited for biomedical applications. Cellular uptake studies using fluorescein isothiocyanate-labeled CNPs showed that cancer cells readily accumulate the nanoparticles 30 minutes posttreatment and that nanoparticles persisted within cells for up to 24 hours posttreatment. As a proof of principle for use in anticancer therapeutic applications, a [14C]-radiolabeled form of the anticancer agent doxorubicin was efficiently encapsulated within the CNP, confirming the feasibility of using this system as a drug delivery vector. PMID:26715842

  14. Heat exchanger-accumulator

    DOEpatents

    Ecker, Amir L.

    1980-01-01

    What is disclosed is a heat exchanger-accumulator for vaporizing a refrigerant or the like, characterized by an upright pressure vessel having a top, bottom and side walls; an inlet conduit eccentrically and sealingly penetrating through the top; a tubular overflow chamber disposed within the vessel and sealingly connected with the bottom so as to define an annular outer volumetric chamber for receiving refrigerant; a heat transfer coil disposed in the outer volumetric chamber for vaporizing the liquid refrigerant that accumulates there; the heat transfer coil defining a passageway for circulating an externally supplied heat exchange fluid; transferring heat efficiently from the fluid; and freely allowing vaporized refrigerant to escape upwardly from the liquid refrigerant; and a refrigerant discharge conduit penetrating sealingly through the top and traversing substantially the length of the pressurized vessel downwardly and upwardly such that its inlet is near the top of the pressurized vessel so as to provide a means for transporting refrigerant vapor from the vessel. The refrigerant discharge conduit has metering orifices, or passageways, penetrating laterally through its walls near the bottom, communicating respectively interiorly and exteriorly of the overflow chamber for controllably carrying small amounts of liquid refrigerant and oil to the effluent stream of refrigerant gas.

  15. Solids Accumulation Scouting Studies

    SciTech Connect

    Duignan, M. R.; Steeper, T. J.; Steimke, J. L.

    2012-09-26

    The objective of Solids Accumulation activities was to perform scaled testing to understand the behavior of remaining solids in a Double Shell Tank (DST), specifically AW-105, at Hanford during multiple fill, mix, and transfer operations. It is important to know if fissionable materials can concentrate when waste is transferred from staging tanks prior to feeding waste treatment plants. Specifically, there is a concern that large, dense particles containing plutonium could accumulate in poorly mixed regions of a blend tank heel for tanks that employ mixing jet pumps. At the request of the DOE Hanford Tank Operations Contractor, Washington River Protection Solutions, the Engineering Development Laboratory of the Savannah River National Laboratory performed a scouting study in a 1/22-scale model of a waste staging tank to investigate this concern and to develop measurement techniques that could be applied in a more extensive study at a larger scale. Simulated waste tank solids: Gibbsite, Zirconia, Sand, and Stainless Steel, with stainless steel particles representing the heavier particles, e.g., plutonium, and supernatant were charged to the test tank and rotating liquid jets were used to mix most of the solids while the simulant was pumped out. Subsequently, the volume and shape of the mounds of residual solids and the spatial concentration profiles for the surrogate for heavier particles were measured. Several techniques were developed and equipment designed to accomplish the measurements needed and they included: 1. Magnetic particle separator to remove simulant stainless steel solids. A device was designed and built to capture these solids, which represent the heavier solids during a waste transfer from a staging tank. 2. Photographic equipment to determine the volume of the solids mounds. The mounds were photographed as they were exposed at different tank waste levels to develop a composite of topographical areas. 3. Laser rangefinders to determine the volume of

  16. Bioavailability of PAHs: effects of soot carbon and PAH source.

    PubMed

    Thorsen, Waverly A; Cope, W Gregory; Shea, Damian

    2004-04-01

    The bioavailability of 38 individual polycyclic aromatic hydrocarbon (PAH) compounds was determined through calculation of biota-sediment-accumulation factors (BSAF). BSAF values were calculated from individual PAH concentrations in freshwater mussel, marine clam, and sediment obtained from field and laboratory bioaccumulation studies. Sediment that was amended with different types of soot carbon (SC) was used in some of the bioaccumulation experiments. BSAF values for petrogenic PAH were greater than those for pyrogenic PAH (e.g., 1.57 +/- 0.53 vs 0.25 +/- 0.23, respectively), indicating that petrogenic PAH are more bioavailable than pyrogenic PAH (p < 0.05). This trend was consistent among marine and freshwater sites. Increased SC content of sediment resulted in a linear decrease in the bioavailability of pyrogenic PAHs (r2 = 0.85). The effect of increasing SC content on petrogenic PAH was negligible. SC was considered as an additional sorptive phase when calculating BSAF values, and using PAH-SC partition coefficients from the literature, we obtained unreasonably large BSAF values for all petrogenic PAH and some pyrogenic PAH. This led us to conclude that a quantitative model to assess bioavailability through a combination of organic carbon and soot carbon sorption is not applicable among field sites with a wide range of soot carbon fractions and PAH sources, at least given our current knowledge of PAH-SC partitioning. Our data offer evidence that many factors including analysis of a full suite of PAH analytes, PAH hydrophobicity, sediment organic carbon content, sediment soot carbon content, and PAH source are importantto adequately assess PAH bioavailability in the environment.

  17. Combined transcriptome, genetic diversity and metabolite profiling in tomato fruit reveals the ethylene response factor SlERF6 to play an important role in ripening and carotenoid accumulation

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Tomato (Solanum lycopersicum) and its wild relatives harbor genetic diversity that yields heritable variation in fruit chemistry that could be exploited to identify genes regulating their synthesis and accumulation. Carotenoids, for example, are essential in plant and animal nutrition and are the vi...

  18. Asset Accumulation and Family Size. A Rand Note.

    ERIC Educational Resources Information Center

    Smith, James P.; Ward, Michael P.

    The influence of childbearing on a family's ability to accumulate assets is examined in this paper. The first section presents a theoretical framework for analyzing the evolving life-time process of asset accumulation. This model highlights the principal factors that determine life cycle paths of consumption, income, savings, and the time…

  19. Distribution of Polycyclic Aromatic Hydrocarbons in Soils and Terrestrial Biota After a Spill of Crude Oil in Trecate, Italy

    SciTech Connect

    Brandt, Charles A. ); Becker, James M. ); Porta, Augusto C.

    2001-12-01

    Following a large blowout of crude oil in northern Italy in 1994, the distribution of polyaromatic hydrocarbons (PAHs) was examined over time and space in soils, uncultivated wild vegetation, insects, mice, and frogs in the area. Within 2 y of the blowout, PAH concentrations declined to background levels over much of the area where initial concentrations were within an order of magnitude above background, but had not declined to background in areas where starting concentrations exceeded background by two orders of magnitude. Octanol-water partitioning and extent of alkylation explained much of the variance in uptake of PAHs by plants and animals. Lower Kow PAHs and higher-alkylated PAHs had higher soil-to-biota accumulation factors (BSAFs) than did high-Kow and unalkylated forms. BSAFs for higher Kow PAHs were very low for plants, but much higher for animals, with frogs accumulating more of these compounds than other species.

  20. Nutrient limitation is the main regulatory factor for carotenoid accumulation and for Psy and Pds steady state transcript levels in Dunaliella salina (Chlorophyta) exposed to high light and salt stress.

    PubMed

    Coesel, Sacha Nicole; Baumgartner, Alexandra Cordeiro; Teles, Licia Marlene; Ramos, Ana Alexandra; Henriques, Nuno Miguel; Cancela, Leonor; Varela, João Carlos Serafim

    2008-01-01

    Dunaliella salina (Dunal) Teodoresco (1905) is a green unicellular alga able to withstand severe salt, light, and nutrient stress, adaptations necessary to grow in harsh environments such as salt ponds. In response to such growth conditions, this microalga accumulates high amounts of beta-carotene in its single chloroplast. In this study, we show that carotenoid accumulation is consistently inhibited in cells grown in nutrient-supplemented media and exposed either to high-light or medium-low-light conditions. Likewise, carotenogenesis in cells shifted to higher salinity (up to 27% NaCl) under medium-low-light conditions is inhibited by the presence of nutrients. The steady-state levels of transcripts encoding phytoene synthase and phytoene desaturase increased substantially in D. salina cells shifted to high light or high salt under nutrient-limiting conditions, whereas the presence of nutrients inhibited this response. The regulatory effect of nutrient availability on the accumulation of carotenoids and messenger RNA levels of the first two enzymes committed to carotenoid biosynthesis is discussed.

  1. Noise Reduction by Signal Accumulation

    ERIC Educational Resources Information Center

    Kraftmakher, Yaakov

    2006-01-01

    The aim of this paper is to show how the noise reduction by signal accumulation can be accomplished with a data acquisition system. This topic can be used for student projects. In many cases, the noise reduction is an unavoidable part of experimentation. Several techniques are known for this purpose, and among them the signal accumulation is the…

  2. Accumulation of persistent organic pollutants in parasites.

    PubMed

    Yen Le, T T; Rijsdijk, Laurie; Sures, Bern; Hendriks, A Jan

    2014-08-01

    Organisms are simultaneously exposed to various stressors, including parasites and pollutants, that may interact with each other. Research on the accumulation of organic compounds in host-parasite systems is scant compared to studies on parasite-metal interactions and mainly focuses on intestinal endoparasites. We reviewed factors that determine the accumulation of persistent organic pollutants (POPs) in host-parasite systems. The wet/dry weight-based concentration of POPs in these parasites is usually lower than that in host tissues because of lower lipid contents in the parasites. However, the fractionation of the pollutants into parasites and their hosts may vary, depending on developmental stages in the life cycle of the parasites. Developmental stages determine the trophic relationship and the taxon of the parasite in the host-parasite systems because of different feeding strategies between the stages. Lipid-corrected concentrations of organic chemicals in the host are usually higher than those in the endoparasites studied. This phenomenon is attributed to a number of physiological and behavioural processes, such as feeding selectivity and strategy and excretion. Moreover, no significant relationship was found between the accumulation factor (i.e. the ratio between the lipid-corrected concentrations in parasites and in their hosts) for polychlorinated biphenyls and either hydrophobicity or molecular size. At the intermediate hydrophobicity, larger and more lipophilic compounds are accumulated at higher levels in both parasites and the host than smaller and less lipophilic compounds. The bioaccumulation of POPs in parasites is affected by some other abiotic, e.g. temperature, and biotic factors, e.g. the number of host species infected by parasites.

  3. Potential ecological risk of heavy metal contamination in sediments and macrobenthos in coastal wetlands induced by freshwater releases: A case study in the Yellow River Delta, China.

    PubMed

    Li, Ming; Yang, Wei; Sun, Tao; Jin, Yuwan

    2016-02-15

    We investigated the nine heavy metal contents in the sediments and macrobenthos of the Yellow River Delta Wetlands using three experimental areas that received freshwater releases and one reference area that did not. Heavy metal contents, the single-factor contamination index (SFCI), the metal contamination index (MCI), and the biota-sediment accumulation factor (BSAF) were used to evaluate the potential ecological risk and bioaccumulation. We found that As exceeded the national standard value by more than 50%, and that the ranges of SFCI for each metal were generally larger in autumn than in spring. MCI showed no clear pattern, but the BSAF results suggest that Cd bioaccumulates from sediments to macrobenthos. Pollution-resistant species such as Corophium sinense, Chironomus sp., and Einfeldia sp. became dominant in the areas receiving freshwater releases, and provide direct evidence of ecological risk in the wetlands. Our results provide preliminary information to guide managers for ecological risk assessments.

  4. Bioaccumulation of atrazine and chlorpyrifos to Lumbriculus variegatus from lake sediments.

    PubMed

    Jantunen, A P K; Tuikka, A; Akkanen, J; Kukkonen, J V K

    2008-11-01

    The bioaccumulation of the pesticides chlorpyrifos and atrazine to the benthic oligochaeta Lumbriculus variegatus from four diverse artificially contaminated lake sediments (OC 0.13-21.5%) was studied in the laboratory. The steady state of bioaccumulation was not reached within 10d. Chlorpyrifos showed stronger bioaccumulation than the less lipophilic atrazine, the biota-sediment accumulation factors (BSAFs) being 6.2-99 for the former and 1.9-5.3 for the latter. While bioaccumulation factors (BAFs) dropped with increasing organic content of the sediments, the high level and considerable range of the obtained BSAFs indicate other sediment qualities, such as the age and characteristics of the organic material, having a strong effect on the bioavailability of these compounds. The slow and incomplete desorption of chlorpyrifos from the most inorganic sediment indicates also that this compound may be strongly bound to some type of inorganic material. Any specific influential sediment fraction or characteristic could not be identified.

  5. Strain accumulation in quasicrystalline solids

    NASA Technical Reports Server (NTRS)

    Nori, Franco; Ronchetti, Marco; Elser, Veit

    1988-01-01

    The relaxation of two-dimensional quasicrystalline elastic networks when their constituent bonds are perturbed homogeneously is studied. Whereas ideal, quasi-periodic networks are stable against such perturbations, significant accumulations of strain in a class of disordered networks generated by a growth process are found. The grown networks are characterized by root mean square phason fluctuations which grow linearly with system size. The strain accumulation observed in these networks also grows linearly with system size. Finally, dependence of strain accumulation on cooling rate is found.

  6. Evaluation of PCB bioaccumulation by Lumbriculus variegatus in field-collected sediments.

    PubMed

    Burkhard, Lawrence P; Mount, David R; Highland, Terry L; Hockett, J Russell; Norberg-King, Teresa; Billa, Nanditha; Hawthorne, Steven B; Miller, David J; Grabanski, Carol B

    2013-07-01

    Review of data from several contaminated sediment sites suggested that biota-sediment accumulation factors (BSAFs) declined with increasing contaminant concentrations in the sediment. To evaluate the consistency and possible causes of this behavior, polychlorinated biphenyl (PCB)-contaminated sediment samples from the Hudson, Grasse, and Fox River Superfund sites were used in sediment bioaccumulation tests with the freshwater oligochaete, Lumbriculus variegatus, with PCB concentrations in interstitial water (IW) quantified using polyoxymethylene passive samplers. Measured BSAFs tended to decrease with increasing PCB concentration in sediment, especially for the more highly chlorinated congeners. Measures of partitioning between sediment, IW, and oligochaetes showed that measured sediment-IW partition coefficients (KTOC ) tended to increase slightly with increasing sediment contamination, whereas the ratio of tissue PCB to IW PCB tended to decrease with increasing concentration in IW. Variation in accumulation among sediments was clearly influenced by bioavailability, as reflected by IW measurements, although the specific cause of varying KTOC was not clear. Calculated partitioning between IW and organism lipid (Klipid ) indicated that accumulation was generally 5 to 10-fold higher than would be predicted if Klipid was approximately equal to the n-octanol-water partition coefficient (KOW ). While affirming previous observations of decreasing BSAFs with increasing PCB contamination, the relatively shallow slope of the observed relationship in the current data may suggest that this concentration dependence is not a major uncertainty in sediment risk assessment, particularly if measurements of PCBs in IW are incorporated.

  7. Accumulative Tritium Transfer from Water into Biosystems

    SciTech Connect

    Baumgaertner, Franz

    2005-07-15

    The energy balance of hydrogen isotopes in H bonds of water and biomolecules results in accumulative tritium transfer from water into biomolecules. Tests of DNA dissolved in tritiated water and of maize or barley hydroponically grown in tritiated water confirm the increase. The primary hydration shell of DNA shows an accumulation factor of {approx}1.4, and the exchangeable hydrogens inside DNA show {approx}2. Logistic growth analyses of maize and barley reveal the intrinsic growth rates of tritium 1.3 and 1.2 times larger than that of hydrogen. The higher rate of tritium than hydrogen incorporation in solid biomatter is caused by the hydration shells, which constitute an intrinsic component of biomolecules.

  8. Manganese As a Metal Accumulator

    EPA Science Inventory

    Manganese deposits in water distribution systems accumulate metals, radionuclides and oxyanions by a combination of surface complexation, adsorption and solid substitution, as well as a combination of oxidation followed by manganese reduction and sorption of the oxidized constitu...

  9. Carbon allocation and accumulation in conifers

    SciTech Connect

    Gower, S.T.; Isebrands, J.G.; Sheriff, D.W.

    1995-07-01

    Forests cover approximately 33% of the land surface of the earth, yet they are responsible for 65% of the annual carbon (C) accumulated by all terrestrial biomes. In general, total C content and net primary production rates are greater for forests than for other biomes, but C budgets differ greatly among forests. Despite several decades of research on forest C budgets, there is still an incomplete understanding of the factors controlling C allocation. Yet, if we are to understand how changing global events such as land use, climate change, atmospheric N deposition, ozone, and elevated atmospheric CO{sub 2} affect the global C budget, a mechanistic understanding of C assimilation, partitioning, and allocation is necessary. The objective of this chapter is to review the major factors that influence C allocation and accumulation in conifer trees and forests. In keeping with the theme of this book, we will focus primarily on evergreen conifers. However, even among evergreen conifers, leaf, canopy, and stand-level C and nutrient allocation patterns differ, often as a function of leaf development and longevity. The terminology related to C allocation literature is often inconsistent, confusing and inadequate for understanding and integrating past and current research. For example, terms often used synonymously to describe C flow or movement include translocation, transport, distribution, allocation, partitioning, apportionment, and biomass allocation. A common terminology is needed because different terms have different meanings to readers. In this paper we use C allocation, partitioning, and accumulation according to the definitions of Dickson and Isebrands (1993). Partitioning is the process of C flow into and among different chemical, storage, and transport pools. Allocation is the distribution of C to different plant parts within the plant (i.e., source to sink). Accumulation is the end product of the process of C allocation.

  10. Maximum likelihood decoding analysis of Accumulate-Repeat-Accumulate Codes

    NASA Technical Reports Server (NTRS)

    Abbasfar, Aliazam; Divsalar, Dariush; Yao, Kung

    2004-01-01

    Repeat-Accumulate (RA) codes are the simplest turbo-like codes that achieve good performance. However, they cannot compete with Turbo codes or low-density parity check codes (LDPC) as far as performance is concerned. The Accumulate Repeat Accumulate (ARA) codes, as a subclass of LDPC codes, are obtained by adding a pre-coder in front of RA codes with puncturing where an accumulator is chosen as a precoder. These codes not only are very simple, but also achieve excellent performance with iterative decoding. In this paper, the performance of these codes with (ML) decoding are analyzed and compared to random codes by very tight bounds. The weight distribution of some simple ARA codes is obtained, and through existing tightest bounds we have shown the ML SNR threshold of ARA codes approaches very closely to the performance of random codes. We have shown that the use of precoder improves the SNR threshold but interleaving gain remains unchanged with respect to RA code with puncturing.

  11. Arsenic accumulation by edible aquatic macrophytes.

    PubMed

    Falinski, K A; Yost, R S; Sampaga, E; Peard, J

    2014-01-01

    Edible aquatic macrophytes grown in arsenic (As)-contaminated soil and sediment were investigated to determine the extent of As accumulation and potential risk to humans when consumed. Nasturtium officinale (watercress) and Diplazium esculentum (warabi) are two aquatic macrophytes grown and consumed in Hawaii. Neither has been assessed for potential to accumulate As when grown in As-contaminated soil. Some former sugarcane plantation soils in eastern Hawaii have been shown to have concentrations of total As over 500 mg kg(-1). It was hypothesized that both species will accumulate more As in contaminated soils than in non-contaminated soils. N. officinale and D. esculentum were collected in areas with and without As-contaminated soil and sediment. High soil As concentrations averaged 356 mg kg(-1), while low soil As concentrations were 0.75 mg kg(-1). Average N. officinale and D. esculentum total As concentrations were 0.572 mg kg(-1) and 0.075 mg kg(-1), respectively, corresponding to hazard indices of 0.12 and 0.03 for adults. Unlike previous studies where watercress was grown in As-contaminated water, N. officinale did not show properties of a hyperaccumulator, yet plant concentrations in high As areas were more than double those in low As areas. There was a slight correlation between high total As in sediment and soil and total As concentrations in watercress leaves and stems, resulting in a plant uptake factor of 0.010, an order of magnitude higher than previous studies. D. esculentum did not show signs of accumulating As in the edible fiddleheads. Hawaii is unique in having volcanic ash soils with extremely high sorption characteristics of As and P that limit release into groundwater. This study presents a case where soils and sediments were significantly enriched in total As concentration, but the water As concentration was below detection limits.

  12. Ion Trapping in the Accumulator

    SciTech Connect

    Marriner, J.

    1985-02-18

    The beam space charge (- for {bar p}'s) will attract positive ions. In the absence of additional fields (clearing electrodes, e.g.) these ions will be trapped in the beam potential well. The depth of this potential well has been calculated for some geometries relevant for the accumulator.

  13. Trace element accumulation in lotic dragonfly nymphs: Genus matters

    PubMed Central

    Fletcher, Dean E.; Lindell, Angela H.; Stillings, Garrett K.; Blas, Susan A.; McArthur, J. Vaun

    2017-01-01

    Constituents of coal combustion waste (CCW) expose aquatic organisms to complex mixtures of potentially toxic metals and metalloids. Multi-element trace element analyses were used to distinguish patterns of accumulation among 8 genera of dragonfly nymphs collected from two sites on a CCW contaminated coastal plain stream. Dragonfly nymphs are exceptional for comparing trace element accumulation in syntopic macroinvertebrates that are all predators within the same order (Odonata) and suborder (Anisoptera), but differ vastly in habitat use and body form. Sixteen trace element (Be, V, Cr, Ni, Cu, Zn, As, Se, Sr, Cd, Sb, Cs, Ba, Hg, Tl, and Pb) were analyzed and trophic position and basal carbon sources assessed with stable isotope analyses (C and N). Trophic positions varied within relatively narrow ranges. Size did not appear to influence trophic position. Trophic position rarely influenced trace element accumulation within genera and did not consistently correlate with accumulation among genera. Patterns between δ13C and trace element accumulation were generally driven by differences between sites. An increase in trace element accumulation was associated with a divergence of carbon sources between sites in two genera. Higher trace element concentrations tended to accumulate in nymphs from the upstream site, closer to contaminant sources. Influences of factors such as body form and habitat use appeared more influential on trace element accumulation than phylogeny for several elements (Ni, Ba, Sr, V, Be, Cd, and Cr) as higher concentrations accumulated in sprawler and the climber-sprawler genera, irrespective of family. In contrast, As and Se accumulated variably higher in burrowers, but accumulation in sprawlers differed between sites. Greater variation between genera than within genera suggests genus as an acceptable unit of comparison in dragonfly nymphs. Overall, taxonomic differences in trace element accumulation can be substantial, often exceeding variation

  14. Trace element accumulation in lotic dragonfly nymphs: Genus matters.

    PubMed

    Fletcher, Dean E; Lindell, Angela H; Stillings, Garrett K; Blas, Susan A; McArthur, J Vaun

    2017-01-01

    Constituents of coal combustion waste (CCW) expose aquatic organisms to complex mixtures of potentially toxic metals and metalloids. Multi-element trace element analyses were used to distinguish patterns of accumulation among 8 genera of dragonfly nymphs collected from two sites on a CCW contaminated coastal plain stream. Dragonfly nymphs are exceptional for comparing trace element accumulation in syntopic macroinvertebrates that are all predators within the same order (Odonata) and suborder (Anisoptera), but differ vastly in habitat use and body form. Sixteen trace element (Be, V, Cr, Ni, Cu, Zn, As, Se, Sr, Cd, Sb, Cs, Ba, Hg, Tl, and Pb) were analyzed and trophic position and basal carbon sources assessed with stable isotope analyses (C and N). Trophic positions varied within relatively narrow ranges. Size did not appear to influence trophic position. Trophic position rarely influenced trace element accumulation within genera and did not consistently correlate with accumulation among genera. Patterns between δ13C and trace element accumulation were generally driven by differences between sites. An increase in trace element accumulation was associated with a divergence of carbon sources between sites in two genera. Higher trace element concentrations tended to accumulate in nymphs from the upstream site, closer to contaminant sources. Influences of factors such as body form and habitat use appeared more influential on trace element accumulation than phylogeny for several elements (Ni, Ba, Sr, V, Be, Cd, and Cr) as higher concentrations accumulated in sprawler and the climber-sprawler genera, irrespective of family. In contrast, As and Se accumulated variably higher in burrowers, but accumulation in sprawlers differed between sites. Greater variation between genera than within genera suggests genus as an acceptable unit of comparison in dragonfly nymphs. Overall, taxonomic differences in trace element accumulation can be substantial, often exceeding variation

  15. Arbuscular mycorrhizal fungi: effects on plant terpenoid accumulation.

    PubMed

    Welling, M T; Liu, L; Rose, T J; Waters, D L E; Benkendorff, K

    2016-07-01

    Arbuscular mycorrhizal fungi (AMF) are a diverse group of soil-dwelling fungi that form symbiotic associations with land plants. AMF-plant associations promote the accumulation of plant terpenoids beneficial to human health, although how AMF mediate terpenoid accumulation is not fully understood. A critical assessment and discussion of the literature relating to mechanisms by which AMF influence plant terpenoid accumulation, and whether this symbiosis can be harnessed in horticultural ecosystems was performed. Modification of plant morphology, phosphorus availability and gene transcription involved with terpenoid biosynthetic pathways were identified as key mechanisms associated with terpenoid accumulation in AMF-colonised plants. In order to exploit AMF-plant symbioses in horticultural ecosystems it is important to consider the specificity of the AMF-plant association, the predominant factor affecting terpenoid accumulation, as well as the end use application of the harvested plant material. Future research should focus on resolving the relationship between ecologically matched AMF genotypes and terpenoid accumulation in plants to establish if these associations are effective in promoting mechanisms favourable for plant terpenoid accumulation.

  16. Heightened biological uptake of polybrominated diphenyl ethers relative to polychlorinated biphenyls near-source revealed by sediment and plankton profiles along a coastal transect in British Columbia.

    PubMed

    Desforges, Jean-Pierre W; Dangerfield, Neil; Shaw, Patrick D; Ross, Peter S

    2014-06-17

    Polychlorinated biphenyl (PCB) and polybrominated diphenyl ether (PBDE) concentrations and profiles in paired sediment-plankton samples were determined along a 500 km transect in coastal British Columbia, Canada. PCB and PBDE levels in sediment were both greater in the industrialized Strait of Georgia than in remote northern sites and exhibited parallel spatial trends. In plankton, recent-use PBDE levels were higher near-source, while levels of legacy PCBs were uniform across sites. Principal component analysis of 95 PCB congeners illustrated the influence of proximity to source (i.e., latitude) on congener patterns for both matrices (sediment, r(2) = 0.52, p = 0.012; plankton, r(2) = 0.59, p = 0.016). The PCB pattern in plankton grew lighter with latitude, but the opposite pattern in sediments suggested that temperature-related fractionation, sediment processes, and basin-wide oceanography had divergent effects on each matrix. Biota-sediment accumulation factors (BSAFs) were greater for PBDEs than PCBs, but spatial profiles were similar; PCBs and PBDEs were near equilibrium in remote atmospherically driven sites (BSAF = 1.7 and 1.3) but accumulated preferentially in sediments at source-driven sites (BSAF = 0.2 and 0.4). The influences of particle-binding and hydrophobicity on the aquatic fate of PCBs and PBDEs was evident by the strong influence of log KOW on congener-specific BSAFs (PCBs, r(2) = 0.18 p < 0.001; PBDEs, r(2) = 0.61 p < 0.001). While biotic uptake of PCBs has become spatially uniform in coastal BC because of dilution over time, biomagnification of PBDEs remains higher in industrialized waters.

  17. Bacterial accumulation in viscosity gradients

    NASA Astrophysics Data System (ADS)

    Waisbord, Nicolas; Guasto, Jeffrey

    2016-11-01

    Cell motility is greatly modified by fluid rheology. In particular, the physical environments in which cells function, are often characterized by gradients of viscous biopolymers, such as mucus and extracellular matrix, which impact processes ranging from reproduction to digestion to biofilm formation. To understand how spatial heterogeneity of fluid rheology affects the motility and transport of swimming cells, we use hydrogel microfluidic devices to generate viscosity gradients in a simple, polymeric, Newtonian fluid. Using video microscopy, we characterize the random walk motility patterns of model bacteria (Bacillus subtilis), showing that both wild-type ('run-and-tumble') cells and smooth-swimming mutants accumulate in the viscous region of the fluid. Through statistical analysis of individual cell trajectories and body kinematics in both homogeneous and heterogeneous viscous environments, we discriminate passive, physical effects from active sensing processes to explain the observed cell accumulation at the ensemble level.

  18. Metal accumulating plants: Medium's role

    NASA Astrophysics Data System (ADS)

    Rabier, J.; Prudent, P.; Szymanska, B.; Mevy, J.-P.

    2003-05-01

    To evaluate phytoremediation potentialities by metal accumulation in tolerant plants, trials are carried out using in vitro cultures. Organie compounds influence on metal accumulation is studied with metals supplemented media. The tested compounds on zinc and lead absorption by Brassica juncea, are chelating agents (EDTA, citric acid) and soluble organic fractions of compost. EDTA seems to enhance the transfer of lead in plant but it is the opposite in the case of zinc. Citric acid stimulates root absorption for both zinc and lead. For the aqueous extracts of compost, variable effects are obtained according to the origin of compost (green wastes and food wastes). In'all tested conditions of cultures, zinc is mainly exported towards shoot while lead is stored in root.

  19. Mechanisms of intrahepatic triglyceride accumulation

    PubMed Central

    Ress, Claudia; Kaser, Susanne

    2016-01-01

    Hepatic steatosis defined as lipid accumulation in hepatocytes is very frequently found in adults and obese adolescents in the Western World. Etiologically, obesity and associated insulin resistance or excess alcohol intake are the most frequent causes of hepatic steatosis. However, steatosis also often occurs with chronic hepatitis C virus (HCV) infection and is also found in rare but potentially life-threatening liver diseases of pregnancy. Clinical significance and outcome of hepatic triglyceride accumulation are highly dependent on etiology and histological pattern of steatosis. This review summarizes current concepts of pathophysiology of common causes of hepatic steatosis, including non-alcoholic fatty liver disease (NAFLD), alcoholic fatty liver disease, chronic HCV infections, drug-induced forms of hepatic steatosis, and acute fatty liver of pregnancy. Regarding the pathophysiology of NAFLD, this work focuses on the close correlation between insulin resistance and hepatic triglyceride accumulation, highlighting the potential harmful effects of systemic insulin resistance on hepatic metabolism of fatty acids on the one side and the role of lipid intermediates on insulin signalling on the other side. Current studies on lipid droplet morphogenesis have identified novel candidate proteins and enzymes in NAFLD. PMID:26819531

  20. Attenuated Escherichia coli strains expressing the colonization factor antigen I (CFA/I) and a detoxified heat-labile enterotoxin (LThK63) enhance clearance of ETEC from the lungs of mice and protect mice from intestinal ETEC colonization and LT-induced fluid accumulation.

    PubMed

    Byrd, Wyatt; Boedeker, Edgar C

    2013-03-15

    Although enterotoxigenic Escherichia coli (ETEC) infections are important causes of infantile and traveler's diarrhea there is no licensed vaccine available for those at-risk. Our goal is to develop a safe, live attenuated ETEC vaccine. We used an attenuated E. coli strain (O157:H7, Δ-intimin, Stx1-neg, Stx2-neg) as a vector (ZCR533) to prepare two vaccine strains, one strain expressing colonization factor antigen I (ZCR533-CFA/I) and one strain expressing CFA/I and a detoxified heat-labile enterotoxin (ZCR533-CFA/I+LThK63) to deliver ETEC antigens to mucosal sites in BALB/c mice. Following intranasal and intragastric immunization with the vaccine strains, serum IgG and IgA antibodies were measured to the CFA/I antigen, however, only serum IgG antibodies were detected to the heat-labile enterotoxin. Intranasal administration of the vaccine strains induced respiratory and intestinal antibody responses to the CFA/I and LT antigens, while intragastric administration induced only intestinal antibody responses with no respiratory antibodies detected to the CFA/I and LT antigens. Mice immunized intranasally with the vaccine strains showed enhanced clearance of wild-type (wt) ETEC bacteria from the lungs. Mice immunized intranasally and intragastrically with the vaccine strains were protected from intestinal colonization following oral challenge with ETEC wt bacteria. Mice immunized intragastrically with the ZCR533-CFA/I+LThK63 vaccine strain had less fluid accumulate in their intestine following challenge with ETEC wt bacteria or with purified LT as compared to the sham mice indicating that the immunized mice were protected from LT-induced intestinal fluid accumulation. Thus, mice intragastrically immunized with the ZCR533-CFA/I+LThK63 vaccine strain were able to effectively neutralize the activity of the LT enterotoxin. However, no difference in intestinal fluid accumulation was detected in the mice immunized intranasally with the vaccine strain as compared to the sham

  1. Accumulating Brisk Walking for Fitness, Cardiovascular Risk, and Psychological Health.

    ERIC Educational Resources Information Center

    Murphy, Marie; Nevill, Alan; Neville, Charlotte; Biddle, Stuart; Hardman, Adrianne

    2002-01-01

    Compared the effects of different patterns of regular brisk walking on fitness, cardiovascular disease risk factors, and psychological well-being in previously sedentary adults. Data on adults who completed either short-bout or long-bout walking programs found that three short bouts of brisk walking accumulated throughout the day were as effective…

  2. A Multicell Trap for Positron Accumulation and Storage

    DTIC Science & Technology

    2006-04-21

    device to accumulate N >_ 1012 positrons (i.e., an increase of a factor of 1000 over current performance) and to store this collection of antimatter ...would be an important step toward the development of even more flexible, portable reservoirs of antimatter with few logistic requirements. The first...N > 1012 positrons (i.e., an increase of a factor of 1000 over current performance) and to store this collection of antimatter as a plasma for times

  3. Distribution, speciation, and bioavailability of lanthanides in the Rhine-Meuse estuary, The Netherlands.

    PubMed

    Moermond, C T; Tijink, J; van Wezel, A P; Koelmans, A A

    2001-09-01

    Changing environmental conditions may influence the fate and bioavailability of lanthanides (part of the rare earth elements [Ln]) in estuaries. The aim of this study was to quantify the variation in estuarine lanthanide solid/water distribution, speciation, and bioaccumulation. The latter was studied in the amphipod Corophium volutator under field and laboratory conditions. Calculations with the chemical equilibrium model MINEQL+ indicate that dissolved lanthanides are complexed mainly to carbonates and dissolved organic matter. In the water phase, the relative abundance of the free ion, LnCO3, and humic complexes decreases from lanthanum to lutetium, whereas the relative abundance of Ln(CO3)2 increases. Cerium and europium anomalies were found in the water. Europium anomalies were also found in some biota. The biota sediment accumulation factors (BSAFs) decreased across the series from lanthanum to lutetium. Regression analysis revealed that alkalinity correlated negatively with lanthanide uptake. This suggests that increasing complexation reduced bioavailability under the prevailing conditions. The BSAFs did not depend on salinity or pH, which may simplify sediment-quality criteria for fresh versus saline waters. Field BSAFs were significantly lower than laboratory values for the same sediments, which is explained by adaptation of the organisms to lanthanides.

  4. Species-dependent effects of biochar amendment on bioaccumulation of atrazine in earthworms.

    PubMed

    Wang, Fang; Ji, Rong; Jiang, Zhongwei; Chen, Wei

    2014-03-01

    We observed that at a contamination level of 4.25 mg-atrazine/kg-soil, the biota-soil accumulation factor (BSAF) for the anecic M. guillelmi is approximately 5 times that for the epigeic E. foetida. This is attributable to the fact that bio-uptake by E. foetida is mainly through dermal absorption, whereas bio-uptake by M. guillelmi is largely affected by the gut processes, through which the physical grinding and surfactant-like materials facilitate the desorption of atrazine from soil. Strikingly, biochar amendment resulted in much greater reduction in BSAF for M. guillelmi than for E. foetida. At a biochar dose of 0.5% (wt:wt) the difference in BSAF between the two species became much smaller, and at a dose of 2% no statistical difference was observed. A likely explanation is that gut processes by M. guillelmi were much less effective in extracting atrazine from the biochar (the predominant phase wherein atrazine resided) than from soil particles.

  5. PAH-sequestration capacity of granular and powder activated carbon amendments in soil, and their effects on earthworms and plants.

    PubMed

    Jakob, Lena; Hartnik, Thomas; Henriksen, Thomas; Elmquist, Marie; Brändli, Rahel C; Hale, Sarah E; Cornelissen, Gerard

    2012-07-01

    A field lysimeter study was carried out to investigate whether the amendment of 2% powder and granular activated carbon (PAC and GAC) to a soil with moderate PAH contamination had an impact on the PAH bioaccumulation of earthworms and plants, since AC is known to be a strong sorbent for organic pollutants. Furthermore, secondary effects of AC on plants and earthworms were studied through growth and nutrient uptake, and survival and weight gain. Additionally, the effect of AC amendments on soil characteristics like pH, water holding capacity, and the water retention curve of the soil were investigated. Results show that the amendment of 2% PAC had a negative effect on plant growth while the GAC increased the growth rate of plants. PAC was toxic to earthworms, demonstrated by a significant weight loss, while the results for GAC were less clear due to ambiguous results of a field and a parallel laboratory study. Both kinds of AC significantly reduced biota to soil accumulation factors (BSAFs) of PAHs in earthworms and plants. The GAC reduced the BSAFs of earthworms by an average of 47 ± 44% and the PAC amendment reduced them by 72 ± 19%. For the investigated plants the BSAFs were reduced by 46 ± 36% and 53 ± 22% by the GAC and PAC, respectively.

  6. Bioaccumulation kinetics of polybrominated diphenyl ethers and decabromodiphenyl ethane from field-collected sediment in the oligochaete, Lumbriculus variegatus.

    PubMed

    Zhang, Baozhong; Li, Huizhen; Wei, Yanli; You, Jing

    2013-12-01

    The extensive use of polybrominated diphenyl ethers (PBDEs) and decabromodiphenyl ethane (DBDPE) has made them widespread contaminants in abiotic environments, but data regarding their bioavailability to benthic organisms are sparse. The bioaccumulation potential of PBDEs and DBDPE from field-collected sediment was evaluated in the oligochaete Lumbriculus variegatus using a 49-d exposure, including a 28-d uptake and a 21-d elimination phase. All PBDEs and DBDPE were bioavailable to the worms with biota-sediment accumulation factors (BSAFs) ranging from 0.0210 g organic carbon/g lipid to 4.09 g organic carbon/g lipid. However, the bioavailability of highly brominated compounds (BDE-209 and DBDPE) was poor compared with that of other PBDEs, and this was confirmed by their relatively low freely dissolved concentrations (C(free)) measured by solid-phase microextraction. The inverse correlation between BSAFs and hydrophobicity was explained by their uptake (k(s)) and elimination (k(e)) rate constants. While ke changed little for PBDEs, ks decreased significantly when chemical hydrophobicity increased. The difference in bioaccumulation kinetics of brominated flame retardants in fish and the worms was explained by their physiological difference and the presence of multiple elimination routes. The appropriateness of 28-d bioaccumulation testing for BSAF estimation was validated for PBDEs and DBDPE. In addition, C(free) was shown to be a good indicator of bioavailability.

  7. Nonalcoholic Lipid Accumulation and Hepatocyte Malignant Transformation

    PubMed Central

    Gu, Juanjuan; Yao, Min; Yao, Dengbing; Wang, Li; Yang, Xuli; Yao, Dengfu

    2016-01-01

    Abstract Worldwide incidence of hepatocellular carcinoma (HCC) is steadily increasing, highlighting its status as a public health concern, particularly due to its significant association with other comorbidities, such as diabetes. However, nonalcoholic fatty liver disease (NAFLD) has emerged as a primary risk factor, with its own prevalence increasing in recent years, and it has gradually caught up with the historical primary etiological factors of infection with hepatitis B virus and hepatitis C virus, exposure to aflatoxin, or alcohol liver disease. The deeply worrisome aspects of all of these high risk factors, however, are their remarkable presence within populations. Systemic and genetic mechanisms involved in the malignant transformation of liver cells, as well as useful biomarkers of early stage HCC are being investigated. However, the exact mechanisms underlying the interrelation of NAFLD and HCC remain largely unknown. In this review, some of the recent advances in our understanding of liver lipid accumulation are summarized and discussed to provide insights into the relationship between NAFLD and hepatocyte malignant transformation. PMID:27350942

  8. Neurodegeneration with brain iron accumulation (NBIA)

    MedlinePlus

    ... gov/ency/article/001225.htm Neurodegeneration with brain iron accumulation (NBIA) To use the sharing features on this page, please enable JavaScript. Neurodegeneration with brain iron accumulation (NBIA) are a group of rare nervous ...

  9. Racial Differences in Patterns of Wealth Accumulation

    ERIC Educational Resources Information Center

    Gittleman, Maury; Wolff, Edward N.

    2004-01-01

    The race differences in patterns of asset accumulations were examined using PSD data for 1984, 1989 and 1994. The results indicate that inheritances led to wealth accumulations among whites as compared to the African Americans.

  10. 47 CFR 32.3100 - Accumulated depreciation.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 47 Telecommunication 2 2010-10-01 2010-10-01 false Accumulated depreciation. 32.3100 Section 32... Accumulated depreciation. (a) This account shall include the accumulated depreciation associated with the... with depreciation amounts concurrently charged to Account 6561, Depreciation...

  11. Ectoine accumulation in Brevibacterium epidermis.

    PubMed

    Onraedt, Annelies; De Muynck, Cassandra; Walcarius, Bart; Soetaert, Wim; Vandamme, Erick

    2004-10-01

    As a halotolerant bacterial species, Brevibacterium epidermis DSM 20659 can grow at relatively high salinity, tolerating up to 2 M NaCl. It synthesizes ectoine and the intracellular content increases with the medium salinity, with a maximum of 0.14 g ectoine/g CDW at 1 M NaCl. Sugar-stressed cells do not synthesize ectoine. Ectoine synthesis is also affected by the presence of external osmolytes. Added betaine is taken up and completely replaced ectoine, while L-proline is only temporarily accumulated after which ectoine is synthesized. The strain can metabolize ectoine; L-glutamate is a better carbon source for ectoine synthesis than L-aspartate.

  12. 40 CFR 89.118 - Deterioration factors and service accumulation.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... PROGRAMS (CONTINUED) CONTROL OF EMISSIONS FROM NEW AND IN-USE NONROAD COMPRESSION-IGNITION ENGINES Emission... maintenance, other than recommended lubrication and filter changes, may be performed during...

  13. 40 CFR 89.118 - Deterioration factors and service accumulation.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... written statement to the Administrator that all data, analyses, test procedures, evaluations, and other... certification. (i) Carryover and carryacross of durability emission data. In lieu of testing an emission data or durability data engine selected under § 89.117(d), a manufacturer may, with Administrator approval,...

  14. 40 CFR 89.118 - Deterioration factors and service accumulation.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... written statement to the Administrator that all data, analyses, test procedures, evaluations, and other... certification. (i) Carryover and carryacross of durability emission data. In lieu of testing an emission data or durability data engine selected under § 89.117(d), a manufacturer may, with Administrator approval,...

  15. 40 CFR 89.118 - Deterioration factors and service accumulation.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... written statement to the Administrator that all data, analyses, test procedures, evaluations, and other... certification. (i) Carryover and carryacross of durability emission data. In lieu of testing an emission data or durability data engine selected under § 89.117(d), a manufacturer may, with Administrator approval,...

  16. 40 CFR 89.118 - Deterioration factors and service accumulation.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... written statement to the Administrator that all data, analyses, test procedures, evaluations, and other... certification. (i) Carryover and carryacross of durability emission data. In lieu of testing an emission data or durability data engine selected under § 89.117(d), a manufacturer may, with Administrator approval,...

  17. Guidelines for Waste Accumulation Areas (WAAs)

    SciTech Connect

    Not Available

    1991-07-01

    The purpose of this document is to set conditions for establishing and maintaining areas for the accumulation of hazardous waste at LBL. Areas designed for accumulation of these wastes in quantities greater than 100 kg (220 lb) per month of solid waste or 55 gallons per month of liquid waste are called Waste Accumulation Areas (WAAs). Areas designed for accumulation of wastes in smaller amounts are called Satellite Accumulation Areas (SAAs). This document provides guidelines for employee and organizational responsibilities for WAAs; constructing a WAA; storing waste in a WAA; operating and maintaining a WAA, and responding to spills in a WAA. 4 figs.

  18. Apolipoprotein E promotes lipid accumulation and differentiation in human adipocytes

    SciTech Connect

    Lasrich, Dorothee; Bartelt, Alexander; Grewal, Thomas; Heeren, Joerg

    2015-09-10

    Several studies in mice indicate a role for apolipoprotein E (APOE) in lipid accumulation and adipogenic differentiation in adipose tissue. However, little is yet known if APOE functions in a similar manner in human adipocytes. This prompted us to compare lipid loading and expression of adipocyte differentiation markers in APOE-deficient and control adipocytes using the differentiated human mesenchymal stem cell line hMSC-Tert as well as primary human and mouse adipocytes as model systems. Differentiated hMSC-Tert were stably transduced with or without siRNA targeting APOE while murine adipocytes were isolated from wild type and Apoe knockout mice. Human APOE knockdown hMSC-Tert adipocytes accumulated markedly less triglycerides compared to control cells. This correlated with strongly decreased gene expression levels of adipocyte markers such as adiponectin (ADIPOQ) and fatty acid binding protein 4 (FABP4) as well as the key transcription factor driving adipocyte differentiation, peroxisome proliferator activator receptor gamma (PPARG), in particular the PPARG2 isoform. Similarly, differentiation of murine Apoe-deficient adipocytes was characterized by reduced gene expression of Adipoq, Fabp4 and Pparg. Interestingly, incubation of APOE-deficient hMSC-Tert adipocytes with conditioned media from APOE3-overexpressing adipocytes or APOE-containing Very Low Density Lipoprotein (VLDL) partially restored triglyceride accumulation, but were unable to induce adipocyte differentiation, as judged by expression of adipocyte markers. Taken together, depletion of endogenous APOE in human adipocytes severely impairs lipid accumulation, which is associated with an inability to initiate differentiation. - Highlights: • Immortalized human mesenchymal stem cells were used to study adipocyte development. • Knockdown of endogenous APOE lead to impaired lipid accumulation and adipogenesis. • APOE supplementation partially restored lipid accumulation but not differentiation.

  19. Herpes simplex virus 2 infection impacts stress granule accumulation.

    PubMed

    Finnen, Renée L; Pangka, Kyle R; Banfield, Bruce W

    2012-08-01

    Interference with stress granule (SG) accumulation is gaining increased appreciation as a common strategy used by diverse viruses to facilitate their replication and to cope with translational arrest. Here, we examined the impact of infection by herpes simplex virus 2 (HSV-2) on SG accumulation by monitoring the localization of the SG components T cell internal antigen 1 (TIA-1), Ras-GTPase-activating SH3-domain-binding protein (G3BP), and poly(A)-binding protein (PABP). Our results indicate that SGs do not accumulate in HSV-2-infected cells and that HSV-2 can interfere with arsenite-induced SG accumulation early after infection. Surprisingly, SG accumulation was inhibited despite increased phosphorylation of eukaryotic translation initiation factor 2α (eIF2α), implying that HSV-2 encodes previously unrecognized activities designed to maintain translation initiation downstream of eIF2α. SG accumulation was not inhibited in HSV-2-infected cells treated with pateamine A, an inducer that works independently of eIF2α phosphorylation. The SGs that accumulated following pateamine A treatment of infected cells contained G3BP and PABP but were largely devoid of TIA-1. We also identified novel nuclear structures containing TIA-1 that form late in infection. These structures contain the RNA binding protein 68-kDa Src-associated in mitosis (Sam68) and were noticeably absent in infected cells treated with inhibitors of viral DNA replication, suggesting that they arise as a result of late events in the virus replicative cycle.

  20. Proteinase Inhibitor I Accumulation in Tomato Suspension Cultures 1

    PubMed Central

    Walker-Simmons, Mary; Ryan, Clarence A.

    1986-01-01

    Suspension-cultured cells of tomato accumulate proteinase Inhibitor I as the sucrose is depleted from 1% to less than 0.1% in the culture medium. Inhibitor I can be prematurely induced to accumulate in the cells by the addition to the medium of the proteinase inhibitor inducing factor, trigalacturonic acid, ethylene glycol chitin, or chitosan. In cultures grown in 0.6% initial sucrose with no inducers added, a uronic acid-rich extracellular polysaccharide appears in the medium during growth of the cells. This extracellular polysaccharide apparently contains an `endogenous inducer' of Inhibitor I synthesis. When the partially purified polysaccharide is added to the culture medium, Inhibitor I accumulation is induced. Proteinase inhibitors also accumulate in tobacco and alfalfa suspension-cultured cells as the cell cultures age. As with the tomato cultures, a uronic acid-rich component(s) appears in the media prior to inhibitor accumulation. These data suggest that an endogenous inducer may be activating proteinase inhibitor genes through a similar mechanism in all three types of cells. PMID:16664609

  1. Sequential biases in accumulating evidence

    PubMed Central

    Huggins, Richard; Dogo, Samson Henry

    2015-01-01

    Whilst it is common in clinical trials to use the results of tests at one phase to decide whether to continue to the next phase and to subsequently design the next phase, we show that this can lead to biased results in evidence synthesis. Two new kinds of bias associated with accumulating evidence, termed ‘sequential decision bias’ and ‘sequential design bias’, are identified. Both kinds of bias are the result of making decisions on the usefulness of a new study, or its design, based on the previous studies. Sequential decision bias is determined by the correlation between the value of the current estimated effect and the probability of conducting an additional study. Sequential design bias arises from using the estimated value instead of the clinically relevant value of an effect in sample size calculations. We considered both the fixed‐effect and the random‐effects models of meta‐analysis and demonstrated analytically and by simulations that in both settings the problems due to sequential biases are apparent. According to our simulations, the sequential biases increase with increased heterogeneity. Minimisation of sequential biases arises as a new and important research area necessary for successful evidence‐based approaches to the development of science. © 2015 The Authors. Research Synthesis Methods Published by John Wiley & Sons Ltd. PMID:26626562

  2. Natural radionuclide accumulation by raindrops

    NASA Astrophysics Data System (ADS)

    Gusev, Anatoly; Martin, Inacio; Shkevov, Rumen; Alves, Mauro

    2016-07-01

    The laboratory of environmental radiation of ITA (São José dos Campos, 23°11'11″S, 45°52'43″W, 650 MAMSL) performs simultaneous monitoring of a natural radiation background and meteorological parameters. A time resolution of up to 1 minute allows a detailed comparison of changes in meteorological parameters with those of a concentration of ambient radon progenies in the atmosphere. Results of a study of variation of a fallout of radon progenies ^{214}Pb and ^{214}Bi concomitanting rainfalls are present. The radionuclide fallout rate is reconstructed from the observed gamma rate through a simulation of the first kind Volterra integral equation with difference kernel, determined by ratio of precipitating rates of 214Pb and 214Bi and their decay half times. An original straightforward step-by-step procedure was used for the numerical solution of the equation. The radionuclide concentration in the rainwater is calculated as a ratio of the reconstructed fallout to the measured rainfall. It was observed that the radionuclide fallout rate increases as the rainfall one in approximately power 0.6, i.e. the same as the mean raindrop volume. The concentration thereafter decreases as the rainfall rate in power 0.4. A numerical simulation of the process of accumulation of the radionuclides during diffusion and coalescence drop growth and aerosol scavenging during a passage from a cloud to the ground was performed. The results of the simulations agree with the experimental data.

  3. Response times from ensembles of accumulators

    PubMed Central

    Zandbelt, Bram; Purcell, Braden A.; Palmeri, Thomas J.; Logan, Gordon D.; Schall, Jeffrey D.

    2014-01-01

    Decision-making is explained by psychologists through stochastic accumulator models and by neurophysiologists through the activity of neurons believed to instantiate these models. We investigated an overlooked scaling problem: How does a response time (RT) that can be explained by a single model accumulator arise from numerous, redundant accumulator neurons, each of which individually appears to explain the variability of RT? We explored this scaling problem by developing a unique ensemble model of RT, called e pluribus unum, which embodies the well-known dictum “out of many, one.” We used the e pluribus unum model to analyze the RTs produced by ensembles of redundant, idiosyncratic stochastic accumulators under various termination mechanisms and accumulation rate correlations in computer simulations of ensembles of varying size. We found that predicted RT distributions are largely invariant to ensemble size if the accumulators share at least modestly correlated accumulation rates and RT is not governed by the most extreme accumulators. Under these regimes the termination times of individual accumulators was predictive of ensemble RT. We also found that the threshold measured on individual accumulators, corresponding to the firing rate of neurons measured at RT, can be invariant with RT but is equivalent to the specified model threshold only when the rate correlation is very high. PMID:24550315

  4. Accumulation boundaries: codimension-two accumulation of accumulations in phase diagrams of semiconductor lasers, electric circuits, atmospheric and chemical oscillators.

    PubMed

    Bonatto, Cristian; Gallas, Jason Alfredo Carlson

    2008-02-28

    We report high-resolution phase diagrams for several familiar dynamical systems described by sets of ordinary differential equations: semiconductor lasers; electric circuits; Lorenz-84 low-order atmospheric circulation model; and Rössler and chemical oscillators. All these systems contain chaotic phases with highly complicated and interesting accumulation boundaries, curves where networks of stable islands of regular oscillations with ever-increasing periodicities accumulate systematically. The experimental exploration of such codimension-two boundaries characterized by the presence of infinite accumulation of accumulations is feasible with existing technology for some of these systems.

  5. Dissolved organic matter reduces algal accumulation of methylmercury

    USGS Publications Warehouse

    Luengen, Allison C.; Fisher, Nicholas S.; Bergamaschi, Brian A.

    2012-01-01

    Dissolved organic matter (DOM) significantly decreased accumulation of methylmercury (MeHg) by the diatom Cyclotella meneghiniana in laboratory experiments. Live diatom cells accumulated two to four times more MeHg than dead cells, indicating that accumulation may be partially an energy-requiring process. Methylmercury enrichment in diatoms relative to ambient water was measured by a volume concentration factor (VCF). Without added DOM, the maximum VCF was 32 x 104, and the average VCF (from 10 to 72 h) over all experiments was 12.6 x 104. At very low (1.5 mg/L) added DOM, VCFs dropped by approximately half. At very high (20 mg/L) added DOM, VCFs dropped 10-fold. Presumably, MeHg was bound to a variety of reduced sulfur sites on the DOM, making it unavailable for uptake. Diatoms accumulated significantly more MeHg when exposed to transphilic DOM extracts than hydrophobic ones. However, algal lysate, a labile type of DOM created by resuspending a marine diatom in freshwater, behaved similarly to a refractory DOM isolate from San Francisco Bay. Addition of 67 μM L-cysteine resulted in the largest drop in VCFs, to 0.28 x 104. Although the DOM composition influenced the availability of MeHg to some extent, total DOM concentration was the most important factor in determining algal bioaccumulation of MeHg.

  6. Uniconazole (S-3307) strengthens the growth and cadmium accumulation of accumulator plant Malachium aquaticum.

    PubMed

    He, Jing; Lin, Lijin; Ma, Qianqian; Liao, Ming'an; Wang, Xun; Lai, Yunsong; Liang, Dong; Xia, Hui; Tang, Yi; Wang, Jin; Wang, Li

    2017-04-03

    The effects of uniconazole (S-3307) application on the growth and cadmium (Cd) accumulation of accumulator plant Malachium aquaticum (L.) Fries. were studied through a pot experiment. The application of S-3307 increased the biomass and photosynthetic pigment content of M. aquaticum in Cd-contaminated soil, and also improved the superoxide dismutase (SOD) and peroxidase (POD) activities in M. aquaticum. Application of S-3307 increased Cd content in shoots and decreased Cd content in roots of M. aquaticum, but the translocation factor (TF) of M. aquaticum increased with the increase of S-3307 concentration. For phytoextraction, the application of S-3307 increased Cd extractions by roots, shoots and whole plants of M. aquaticum, and the maxima were obtained at 75 mg L(-1) S-3307, which increased by 22.07%, 37.79% and 29.07%, respectively, compared with their respective controls. Therefore, S-3307 can be used for enhancing the Cd extraction ability of M. aquaticum, and 75 mg L(-1) S-3307 was the optimal dose.

  7. MYB76 Inhibits Seed Fatty Acid Accumulation in Arabidopsis

    PubMed Central

    Duan, Shaowei; Jin, Changyu; Li, Dong; Gao, Chenhao; Qi, Shuanghui; Liu, Kaige; Hai, Jiangbo; Ma, Haoli; Chen, Mingxun

    2017-01-01

    The MYB family of transcription factors is important in regulatory networks controlling development, metabolism and responses to biotic and abiotic stresses in Arabidopsis. However, their role in regulating fatty acid accumulation in seeds is still largely unclear. Here, we found that MYB76, localized in the nucleus, was predominantly expressed in developing seeds during maturation. The myb76 mutation caused a significant increase in the amounts of total fatty acids and several major fatty acid compositions in mature seeds, suggesting that MYB76 functioned as an important repressor during seed oil biosynthesis. RNA sequencing and quantitative real-time PCR analysis revealed remarkable alteration of numerous genes involved in photosynthesis, fatty acid biosynthesis, modification, and degradation, and oil body formation in myb76 seeds at 12 days after pollination. These results help us to understand the novel function of MYB76 and provide new insights into the regulatory network of MYB transcriptional factors controlling seed oil accumulation in Arabidopsis. PMID:28270825

  8. Anthropogenic Mercury Accumulation in Watersheds of the Northern Appalachian Mountains

    NASA Astrophysics Data System (ADS)

    Boyer, E. W.; Drohan, P. J.; Lawler, D.; Grimm, J.; Grant, C.; Eklof, K. J.; Bennett, J.; Naber, M. D.

    2014-12-01

    Atmospheric deposition of mercury (Hg) is a critical environmental stress that affects ecosystems and human health. Mercury emissions to the atmosphere from coal-fired power plants and other sources such as waste incineration can be deposited over large geographic areas to downwind landscapes in precipitation and in dry fallout. The northern Appalachian Mountains are downwind of major atmospheric mercury emissions sources. Some mercury reaches watersheds and streams, where it can accumulate in sediments and biota. Human exposure to mercury occurs primarily through fish consumption, and currently mercury fish eating advisories are in place for many of the streams and lakes in the region. Here, we explored mercury accumulation in forested landscapes - in air, soils, water, and biota. To quantify atmospheric mercury deposition, we measured both wet and dry mercury deposition at 10 forested locations, from which we present variation in mercury deposition and initial assessments of factors affecting the patterns. To quantify mercury accumulation in terrestrial environments, we measured soil mercury concentrations within and surrounding 12 vernal pools spanning various physiographic settings in the region. Given that vernal pools have large inputs of water via precipitation yet do not have any stream discharge outflow, they are likely spots within the forested landscape to accumulate pollutants that enter via wet atmospheric deposition. To quantify mercury accumulation in aquatic environments, we sampled mercury concentrations in streams draining 35 forested watersheds, spanning gradients of atmospheric deposition, climate and geology. Mercury concentrations were measured in stream water under base-flow conditions, in streambed sediments, aquatic mosses, and in fish tissues from brook trout. Results indicate that wet and dry atmospheric deposition is a primary source of mercury that is accumulating in watersheds of the Northern Appalachian Mountains.

  9. Origin, migration, and accumulation of petroleum in Gulf Coast Cenozoic

    SciTech Connect

    Jones, R.W.

    1986-05-01

    Explanations of the origin, migration, and accumulation of petroleum in the Gulf Coast upper Cenozoic must accommodate the following facts. (1) No specific source of the petroleum has ever been identified. (2) The most probable source section is 10,000-20,000 ft of low TOC (0.4-1.0 wt %) shale that underlies the reservoirs. (3) Tremendous volumes of dry gas have been generated in the middle and basal part of the source section. (4) More gas than oil is in the reservoirs. (5) The distribution of oil and gas accumulations in the Cenozoic is not primarily controlled by the distribution of terrestrial gas-prone organic facies and marine oil-prone organic facies, but by the relative ease of migration of the two hydrocarbon phases. For example, gas preferentially accumulates in the simpler structures, oil in the intrusive salt domes. (6) High pressure and high porosity in the source rock indicates that neither water movement nor continuous phase oil movement out of the source rock are likely to be significant factors in primary migration. (7) The situation is very dynamic, with generation, migration, and accumulation occurring today. (8) Faults are very important as controls on migration and accumulation of the petroleum. The interaction of these (and other) factors suggests that most oil reservoirs in the Gulf Coast upper Cenozoic sediments probably initially became mobile after being dissolved in gas in the source rock. The gas-oil mixture moved toward lower pressure areas adjacent to and in faults, and moved upward into reservoirs and traps along faults.

  10. Arsenic accumulation by ferns: a field survey in southern China.

    PubMed

    Wei, Chao-Yang; Wang, Cheng; Sun, Xin; Wang, Wu-Yi

    2007-06-01

    The objective of this study reported here was to characterize arsenic (As) accumulation by Pteris ferns by comparing 3 of the ferns of this genus with each other as well as with four non-Pteris ferns growing on seven sites in southern China with different As levels. A total of 112 samples, including 78 Pteris vittata, 13 P. cretica, 3 P. multifida and 18 ferns from other non-Pteris genera, with the soils in which they grew were collected for As and other elemental analyses. P. vittata was found to be the most dominant species and the most efficient As-accumulator, whereas P. multifida was the lowest As-accumulator among the Pteris ferns, with 4.54-3599, 28.7-757 and 11.2-341 mg kg(-1) As recorded in the fronds of P. vittata, P. cretica and P. multifida, respectively. Arsenic concentrations in non-Pteris ferns were generally much lower than those in Pteris ferns, with 0.81-1.32, 3.59, 10.7, 6.17-24.3 mg kg(-1) in the fronds of Blechumum orientale, Dicranopteris dichotoma, Pteridium aquilinum and Cyclosorus acuminatus, respectively. For P. vittata, the As bioaccumulation factor (ratio of As in fronds to that in soils) changed, whereas the As translocation factor (ratio of As in fronds to that in roots) remained unchanged among the different sites. The concentrations of Fe were very high in all of the collected fern sample, with the exception of B. orientale, with 207-6865, 637-3369, 375-1856, 1876, 493-6865 and 492 mg kg(-1) in the fronds of P. vittata, P. cretica, P. multifida, C. acuminatus, P. aquilinum and D. dichotoma, respectively. The association between Fe accumulation and As accumulation and tolerance in these ferns indicates the unique role of Fe in As-hyperaccumulation.

  11. 46 CFR 58.30-25 - Accumulators.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... RELATED SYSTEMS Fluid Power and Control Systems § 58.30-25 Accumulators. (a) An accumulator is an unfired pressure vessel in which energy is stored under high pressure in the form of a gas or a gas and hydraulic... result in contamination of the hydraulic fluid and loss of gas through absorption. (c) Each...

  12. 46 CFR 58.30-25 - Accumulators.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... RELATED SYSTEMS Fluid Power and Control Systems § 58.30-25 Accumulators. (a) An accumulator is an unfired pressure vessel in which energy is stored under high pressure in the form of a gas or a gas and hydraulic... result in contamination of the hydraulic fluid and loss of gas through absorption. (c) Each...

  13. Proline accumulation in plants: a review.

    PubMed

    Verbruggen, Nathalie; Hermans, Christian

    2008-11-01

    Proline (Pro) accumulation is a common physiological response in many plants in response to a wide range of biotic and abiotic stresses. Controversy has surrounded the possible role(s) of proline accumulation. In this review, knowledge on the regulation of Pro metabolism during development and stress, results of genetic manipulation of Pro metabolism and current debate on Pro toxicity in plants are presented.

  14. 40 CFR 262.34 - Accumulation time.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ...) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE Pre-Transport Requirements § 262.34 Accumulation time. (a) Except as provided in paragraphs (d), (e), and (f) of this section, a generator may accumulate...: (1) The waste is placed: (i) In containers and the generator complies with the...

  15. 40 CFR 262.34 - Accumulation time.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE Pre-Transport Requirements § 262.34 Accumulation time. (a) Except as provided in paragraphs (d), (e), and (f) of this section, a generator may accumulate...: (1) The waste is placed: (i) In containers and the generator complies with the...

  16. 40 CFR 262.34 - Accumulation time.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ...) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE Pre-Transport Requirements § 262.34 Accumulation time. (a) Except as provided in paragraphs (d), (e), and (f) of this section, a generator may accumulate...: (1) The waste is placed: (i) In containers and the generator complies with the...

  17. 40 CFR 262.34 - Accumulation time.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ...) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE Pre-Transport Requirements § 262.34 Accumulation time. (a) Except as provided in paragraphs (d), (e), and (f) of this section, a generator may accumulate...: (1) The waste is placed: (i) In containers and the generator complies with the...

  18. 40 CFR 262.34 - Accumulation time.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ...) STANDARDS APPLICABLE TO GENERATORS OF HAZARDOUS WASTE Pre-Transport Requirements § 262.34 Accumulation time. (a) Except as provided in paragraphs (d), (e), and (f) of this section, a generator may accumulate...: (1) The waste is placed: (i) In containers and the generator complies with the...

  19. 19 CFR 10.2017 - Accumulation.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 19 Customs Duties 1 2014-04-01 2014-04-01 false Accumulation. 10.2017 Section 10.2017 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY... Rules of Origin § 10.2017 Accumulation. (a) Originating materials from the territory of a Party that...

  20. Lethal hydroxyl radical accumulation by a lactococcal bacteriocin, lacticin Q.

    PubMed

    Li, Mengqi; Yoneyama, Fuminori; Toshimitsu, Nayu; Zendo, Takeshi; Nakayama, Jiro; Sonomoto, Kenji

    2013-08-01

    The antimicrobial mechanism of a lactococcal bacteriocin, lacticin Q, can be described by the toroidal pore model without any receptor. However, lacticin Q showed different degrees of activity (selective antimicrobial activity) against Gram-positive bacteria even among related species. The ability of lacticin Q to induce pore formation in liposomes composed of lipids from different indicator strains indicated that its selective antimicrobial activity could not be attributed only to membrane lipid composition. We investigated the accumulation of deleterious hydroxyl radicals after exposure to lacticin Q as a contributing factor to cell death in the indicator strains. When lacticin Q of the same concentration as the MIC or minimum bactericidal concentration was added to the indicator cultures, high levels of hydroxyl radical accumulation were detected. Treatment with hydroxyl radical scavengers, thiourea and 2,2'-bipyridyl, decreased the levels of hydroxyl radical accumulation and recovered cell viability. These results suggest that, with or without pore formation, the final antimicrobial mechanism of lacticin Q is the accumulation of hydroxyl radicals, which varies by strain, resulting in the selective antimicrobial activity of lacticin Q.

  1. Lethal Hydroxyl Radical Accumulation by a Lactococcal Bacteriocin, Lacticin Q

    PubMed Central

    Li, Mengqi; Yoneyama, Fuminori; Toshimitsu, Nayu; Zendo, Takeshi; Nakayama, Jiro

    2013-01-01

    The antimicrobial mechanism of a lactococcal bacteriocin, lacticin Q, can be described by the toroidal pore model without any receptor. However, lacticin Q showed different degrees of activity (selective antimicrobial activity) against Gram-positive bacteria even among related species. The ability of lacticin Q to induce pore formation in liposomes composed of lipids from different indicator strains indicated that its selective antimicrobial activity could not be attributed only to membrane lipid composition. We investigated the accumulation of deleterious hydroxyl radicals after exposure to lacticin Q as a contributing factor to cell death in the indicator strains. When lacticin Q of the same concentration as the MIC or minimum bactericidal concentration was added to the indicator cultures, high levels of hydroxyl radical accumulation were detected. Treatment with hydroxyl radical scavengers, thiourea and 2,2′-bipyridyl, decreased the levels of hydroxyl radical accumulation and recovered cell viability. These results suggest that, with or without pore formation, the final antimicrobial mechanism of lacticin Q is the accumulation of hydroxyl radicals, which varies by strain, resulting in the selective antimicrobial activity of lacticin Q. PMID:23733459

  2. Polychlorinated dibenzo-p-dioxins, dibenzofurans, and dioxin-like polychlorinated biphenyls in sediment and mussel samples from Kentucky Lake, USA.

    PubMed

    Loganathan, Bommanna G; Kumar, Kurunthachalam Senthil; Masunaga, Shigeki; Sajwan, Kenneth S

    2008-01-01

    Sediment and mussel tissues from the Kentucky Dam Tailwater (KDTW) and Ledbetter Embayment (LE) of Kentucky Lake, Kentucky, USA, were analyzed to examine the presence of 2,3,7,8-substituted polychlorinated dibenzo-p-dioxins (PCDDs), polychlorinated dibenzofurans (PCDFs), and non-, mono-, and di-ortho-chlorine-substituted polychlorinated biphenyls. Concentrations of target compounds varied with locations and sample matrices. In general, KDTW sediment samples contained slightly higher amounts of PCDD/DFs (average: 1100, range: 120-2400) than the LE sediments (average: 920, range: 580-1300) on a pg/g dry wt (dw) basis. Dioxin-like PCBs in KDTW were (average: 550, range: 70-2,000) higher than in LE (average: 320, range: 44-1000) on a ng/g dw basis. In contrast, mussel tissues had greater concentrations of PCDD/DFs in LE (average: 6500, range: 2200-13,000) than in KDTW (average: 3500, range: 2500-4800). Dioxin-like PCBs were slightly higher in KDTW (average: 76, range: 18-100) than in LE (average: 49, range: 24-96) on a ng/g fat wt basis. Biota sediment accumulation factors (BSAFs) were calculated using tissue concentrations and sediment concentrations based on dry weight. PCDD/DFs BSAF was in the range of 0.21-25 in LE and 0.093-13 in KDTW. 1,2,3,7,8,9-HxCDF in LE and 2,3,7,8-TCDF in KDTW had a greater BSAF, while BSAF for dioxin-like PCBs ranged from 0.84 to 13 in LE and from 2.3 to 12 in KDTW in which PCB-169 had the greatest BSAF in LE and PCB-167 in KDTW. Toxic equivalency (TEQ) was greatest in mussel from LE (mean: 193 pgTEQ/g fat wt) followed by mussel from KDTW (32 pgTEQ/g fat wt), sediment in KDTW (13 pgTEQ/g dry wt), and sediment in LE (7.6 pgTEQ/g dry wt). In general, PCDD/DF had a greater contribution to toxicity in mussels, while dioxin-like PCBs had a greater contribution to toxicity in sediment at both locations.

  3. Geochemistry Model Validation Report: External Accumulation Model

    SciTech Connect

    K. Zarrabi

    2001-09-27

    The purpose of this Analysis and Modeling Report (AMR) is to validate the External Accumulation Model that predicts accumulation of fissile materials in fractures and lithophysae in the rock beneath a degrading waste package (WP) in the potential monitored geologic repository at Yucca Mountain. (Lithophysae are voids in the rock having concentric shells of finely crystalline alkali feldspar, quartz, and other materials that were formed due to entrapped gas that later escaped, DOE 1998, p. A-25.) The intended use of this model is to estimate the quantities of external accumulation of fissile material for use in external criticality risk assessments for different types of degrading WPs: U.S. Department of Energy (DOE) Spent Nuclear Fuel (SNF) codisposed with High Level Waste (HLW) glass, commercial SNF, and Immobilized Plutonium Ceramic (Pu-ceramic) codisposed with HLW glass. The scope of the model validation is to (1) describe the model and the parameters used to develop the model, (2) provide rationale for selection of the parameters by comparisons with measured values, and (3) demonstrate that the parameters chosen are the most conservative selection for external criticality risk calculations. To demonstrate the applicability of the model, a Pu-ceramic WP is used as an example. The model begins with a source term from separately documented EQ6 calculations; where the source term is defined as the composition versus time of the water flowing out of a breached waste package (WP). Next, PHREEQC, is used to simulate the transport and interaction of the source term with the resident water and fractured tuff below the repository. In these simulations the primary mechanism for accumulation is mixing of the high pH, actinide-laden source term with resident water; thus lowering the pH values sufficiently for fissile minerals to become insoluble and precipitate. In the final section of the model, the outputs from PHREEQC, are processed to produce mass of accumulation

  4. A newly found cadmium accumulator--Malva sinensis Cavan.

    PubMed

    Zhang, Shirong; Chen, Mingying; Li, Ting; Xu, Xiaoxun; Deng, Liangji

    2010-01-15

    Screening hyperaccumulators and accumulators is a key step in the phytoremediation of soils contaminated by heavy metals. A pot experiment was conducted involving a soil Cd concentration gradient (0, 50, 75, 100, 125, 150, 175, and 200 mg kg(-1)) to determine if Malva sinensis Cavan. from two lead-zinc mines in Kangding and Yajiang in western Sichuan, China, is a Cd-hyperaccumulator. The highest Cd concentrations in plant shoots from Kangding and Yajiang were 154.30 and 122.77 mg kg(-1), respectively, at a soil Cd concentration of 200 mg kg(-1). The largest amounts of accumulation in plant shoots from Kangding and Yajiang were 700.5 and 1403.2 microg pot(-1), respectively. The bioconcentration factors in shoots were 0.53-1.03 for Kangding and 0.69-1.25 for Yajiang. Moreover, all translocation factors of plants from the two sites were over 1.0. Therefore, M. sinensis can be classified as a Cd-accumulator or non-standard Cd-hyperaccumulator.

  5. Differential accumulation of lead by soft tissues of rabbit

    SciTech Connect

    Villarreal-Trevino, C.M.; Villegas-Navarro, A.

    1987-08-01

    In studies on retention of lead by soft tissues, it is reported that, in acute and chronic intoxications, the concentration of Pb decrease in the following order: liver, kidney, heart and brain. The liver contains more lead than the other soft tissues; this might be due to the volume of blood that stays within the organ. Several parameters like age, temperature, perfusion, vascularity and residual blood volume could be important factors in the movement and differential accumulation of lead in blood and tissues. However, these parameters do not completely explain the quantitative differences in the retention of Pb between organs, and it is possible that other factors like the dose and the time between the administration of lead and the killing (exposure time), would have considerable importance in this process that so far has not been satisfactorily explained. The relationships between the size of a dose of lead given intravenously and the retention of this metal by some organs, as well as the effect of the duration of exposure of an intravenously administered dose of lead on accumulation were studied in this work. The possible relationships between accumulation and the values reported for perfusion and residual blood volumes were also studied.

  6. Kalimeris integrifolia Turcz. ex DC.: an accumulator of Cd.

    PubMed

    Wei, Shuhe; Zhou, Qixing; Srivastava, Mrittunjai; Xiao, Hong; Yang, Chuanjie; Zhang, Qianru

    2009-03-15

    Phytoremediation is a traditional technique that uses vegetation to remediate contaminants from water, soil and sediments. This is a solar-driven, aesthetically pleasing, and cost effective technology. In a former published article, Kalimeris integrifolia Turcz. ex DC. indicated some basic properties of hyperaccumulators for cadmium (Cd). In this study, concentration gradient experiment and sample-analyzing experiments were used to assess whether this plant is a Cd-hyperaccumulator. The results showed the Cd enrichment factor (concentration in plant/soil) and Cd translocation factor (concentration in shoot/root) of K. integrifolia was basically >1 in concentration gradient experiment. Shoot biomass was not reduced significantly (p<0.05) compared to the control. However, the Cd concentration in K. integrifolia shoots was not higher than 100 mg kg(-1), the threshold concentration for a Cd-hyperaccumulator. Thus, K. integrifolia should only be considered as a Cd-accumulator. In the sample-analyzing experiments conducted in a Pb-Zn mine area and a wastewater irrigation region, K. integrifolia also showed Cd-accumulator properties. Based on these results, K. integrifolia could be identified as a Cd-accumulator.

  7. Adaptation of marine plankton to environmental stress by glycolipid accumulation.

    PubMed

    Gašparović, Blaženka; Godrijan, Jelena; Frka, Sanja; Tomažić, Igor; Penezić, Abra; Marić, Daniela; Djakovac, Tamara; Ivančić, Ingrid; Paliaga, Paolo; Lyons, Daniel; Precali, Robert; Tepić, Nataša

    2013-12-01

    A systematic investigation of non-phosphorus containing glycolipids (GL) was conducted in the northern Adriatic Sea during two years at two stations with different nutrient loads. GL concentration varied both spatially and temporally, with values of 1.1-21.5 μg/L and 0.4-44.7 μg/L in the particulate and the dissolved fraction, respectively. The highest concentrations were measured during summer in surface waters and at the more oligotrophic station, where GL yields (% of total lipids) were often higher than 20% and 50% in the particulate and dissolved fractions, respectively. To obtain more insight into factors governing GL accumulation autotrophic plankton community structure (pico-, nano- and microplankton fractions), chlorophyll a, heterotrophic bacteria and nutrient concentrations were measured together with hydrographic parameters and sunlight intensity. During the investigated period smaller autotrophic plankton cells (pico- and followed by nanoplankton) prevailed in abundance over larger cells (microplankton), which were found in large numbers in freshened surface samples. Several major findings resulted from the study. Firstly, during PO4 limitation, particularly at the oligotrophic station, enhanced glycolipid instead of phospholipid accumulation takes place, representing an effective phosphate-conserving mechanism. Secondly, results suggest that at seawater temperatures >19 °C autotrophic plankton considerably accumulate GL, probably to achieve thermal stability. Thirdly, high sunlight intensities seem to influence increased GL accumulation; GL possibly plays a role in cell mechanisms that prevent/mitigate photooxidation. And finally, substantial accumulation of GL detected in the dissolved fraction could be related to the fact that GL do not contain biologically relevant elements, like phosphorus, which makes them an unattractive substrate for enzyme activity. Therefore, substantial portion of CO2 could be removed from the atmosphere in P

  8. Genetic and Environmental Controls on Nitrous Oxide Accumulation in Lakes

    PubMed Central

    Saarenheimo, Jatta; Rissanen, Antti J.; Arvola, Lauri; Nykänen, Hannu; Lehmann, Moritz F.; Tiirola, Marja

    2015-01-01

    We studied potential links between environmental factors, nitrous oxide (N2O) accumulation, and genetic indicators of nitrite and N2O reducing bacteria in 12 boreal lakes. Denitrifying bacteria were investigated by quantifying genes encoding nitrite and N2O reductases (nirS/nirK and nosZ, respectively, including the two phylogenetically distinct clades nosZI and nosZII) in lake sediments. Summertime N2O accumulation and hypolimnetic nitrate concentrations were positively correlated both at the inter-lake scale and within a depth transect of an individual lake (Lake Vanajavesi). The variability in the individual nirS, nirK, nosZI, and nosZII gene abundances was high (up to tenfold) among the lakes, which allowed us to study the expected links between the ecosystem’s nir-vs-nos gene inventories and N2O accumulation. Inter-lake variation in N2O accumulation was indeed connected to the relative abundance of nitrite versus N2O reductase genes, i.e. the (nirS+nirK)/nosZI gene ratio. In addition, the ratios of (nirS+nirK)/nosZI at the inter-lake scale and (nirS+nirK)/nosZI+II within Lake Vanajavesi correlated positively with nitrate availability. The results suggest that ambient nitrate concentration can be an important modulator of the N2O accumulation in lake ecosystems, either directly by increasing the overall rate of denitrification or indirectly by controlling the balance of nitrite versus N2O reductase carrying organisms. PMID:25756328

  9. Transport and accumulation of flavonoids in grapevine (Vitis vinifera L.)

    PubMed Central

    Braidot, Enrico; Zancani, Marco; Petrussa, Elisa; Peresson, Carlo; Bertolini, Alberto; Patui, Sonia; Macrì, Francesco

    2008-01-01

    Flavonoids are a group of secondary metabolites widely distributed in plants that represent a huge portion of the soluble phenolics present in grapevine (Vitis vinifera L.). These compounds play different physiological roles and are often involved in protection against biotic and abiotic stress. Even if the flavonoid biosynthetic pathways have been largely characterized, the mechanisms of their transport and accumulation in cell wall and vacuole are still not completely understood. This review analyses the known mechanisms of flavonoid uptake and accumulation in grapevine, with reference to the transport models and membrane carrier proteins described in other plant species. The effect of different environmental factors on flavonoid biosynthesis and transporters is also discussed. PMID:19513253

  10. Methods to assess lipid accumulation in cancer cells.

    PubMed

    Sikkeland, Jørgen; Jin, Yang; Saatcioglu, Fahri

    2014-01-01

    Oncogenesis and tumor progression are associated with significant alterations in cellular metabolism. One metabolic pathway that is commonly deregulated in malignant cells is de novo lipogenesis. Lipogenesis is indeed highly upregulated in several types of cancer, a phenomenon that is linked to tumor progression and poor prognosis. Steroid hormones play an essential role in the growth of a variety of cancers and have been shown to increase the expression and activity of several lipogenic factors, including fatty acid synthase and sterol regulatory element-binding proteins. Such an altered gene expression profile promotes lipid biogenesis and may result in the accumulation of neutral lipids, which become visible as cytoplasmic lipid droplets. By using breast and prostate cancer cells exposed to steroid hormones as a model, here we describe methods for the direct qualitative and quantitative assessment of neutral lipid accumulation in malignant cells.

  11. Bioaccumulation of organochlorine pesticides and polychlorinated biphenyls by loaches living in rice paddy fields of Northeast China.

    PubMed

    Zhang, Haijun; Lu, Xianbo; Zhang, Yichi; Ma, Xindong; Wang, Shuqiu; Ni, Yuwen; Chen, Jiping

    2016-09-01

    The concentrations of 21 organochlorine pesticide (OCP) residues and 18 polychlorinated biphenyl (PCB) congeners were measured in two loach species (Misgurnus mohoity and Paramisgurnus dabryanus) and the soils of their inhabiting rice paddies from three typical rice production bases of Northeast China to explore the main factors influencing the bioaccumulation. The concentrations of ∑18PCBs and ∑21OCPs in loaches were determined to be in the ranges of 0.14-0.76 ng g(-1) wet weight (ww) and 1.19-78.53 ng g(-1) ww, respectively. Most of loaches showed the considerably high contamination levels of dichlorodiphenyltrichloroethane (DDT), hexachlorocyclohexane (HCH), hexachlorobenzene (HCB), which accounted for over 97% of the total OCPs. The much lower maximum allowable loach consumption rates (<15 g d(-1)) indicated a high carcinogenic risk that results from the consumption of rice-field loaches. The field biota-soil accumulation factor (BSAF) was calculated as a main measure of bioaccumulation potential. The comparisons of BSAF values and the results of multivariate analysis indicated that habitat-specific environmental conditions, mainly the paddy soil contamination levels and average temperature, decisively affected the bioaccumulation of organochlorine contaminants. When the influence of lipid contents was offset, M. mohoity loaches were found to have a higher potential to accumulation PCBs and OCPs than P. dabryanus loaches, while the bioaccumulation potentials did not exhibit significant differences between juvenile and adult loaches and between male and female loaches. The octanol-water partition coefficient (KOW) was the main chemical factor influencing bioaccumulation potentials. The BSAF values presented an increasing tendency with increasing log KOW values from 6.0 to approximately 7.0, followed by a decreasing tendency with a continuous increase in log KOW values. Moreover, loaches exhibited an isomeric-selective bioaccumulation for p

  12. 40 CFR 94.220 - Service accumulation.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... accumulation. (a) Each test emission data engine in the test fleet may be operated with all emission control systems operating properly for a period, up to 125 hours of operation, that is sufficient to...

  13. The accumulation and structure of comets

    NASA Technical Reports Server (NTRS)

    Donn, Bertram

    1991-01-01

    The paper reviews evidence for the accumulation of the terrestrial planets and comets from solid grains, with emphasis on the various proposals for the formation of cometary nuclei. With three exceptions, all hypotheses conclude or imply that a single compact object forms. Several hypotheses start with Goldreich-Ward-type gravitational instabilities. The collapse for this case also occurs at low velocities in the cm/s to m/s range. Experiment and theory show that under these conditions, low-density, filamentary clusters form that are fractal aggregates with a fractal dimension approximately equal to 2. In order to form cometary nuclei, the initial temperature must be about 50 K and not undergo a significant temperature rise during the accumulation process. The calculations show that accumulation will occur at low temperatures. Models of cometary nuclei are reviewed, and a simple model of the structure that results fom the accumulation of fluffy aggregates is described.

  14. Waste tank ventilation system waste material accumulations

    SciTech Connect

    Van Vleet, R.J., Westinghouse Hanford

    1996-08-06

    This paper calculates the amount of material that accumulates in the ventilation systems of various Tank Waste Remediation System facilities and estimates the amount of material that could be released due to a rapid pressurization.

  15. 19 CFR 10.534 - Accumulation.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Singapore Free Trade Agreement Rules of Origin § 10.534 Accumulation. (a) Originating materials of Singapore or the United States...

  16. 19 CFR 10.534 - Accumulation.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Singapore Free Trade Agreement Rules of Origin § 10.534 Accumulation. (a) Originating materials of Singapore or the United States...

  17. 19 CFR 10.534 - Accumulation.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Singapore Free Trade Agreement Rules of Origin § 10.534 Accumulation. (a) Originating materials of Singapore or the United States...

  18. 19 CFR 10.534 - Accumulation.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Singapore Free Trade Agreement Rules of Origin § 10.534 Accumulation. (a) Originating materials of Singapore or the United States...

  19. 19 CFR 10.534 - Accumulation.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Singapore Free Trade Agreement Rules of Origin § 10.534 Accumulation. (a) Originating materials of Singapore or the United States...

  20. Sodium accumulation in Atriplex. Final report

    SciTech Connect

    Norton, J.A.; Caldwell, M.M.; Richardson, S.G.

    1984-09-01

    This study was undertaken to determine the ecological significance and the significance to arid land reclamation of sodium accumulation and nonaccumulation in Atriplex. There was a continuum in the genetic tendency of Atriplex canescens to accumulate sodium, from populations which accumulated almost no sodium to populations which accumulated up to 7% in the leaves. There were also substantial differences in sodium uptake between populations of A. tridentata, A. falcata and A. gardneri, with some populations having less than 0.1% leaf sodium and other populations having up to 5 or 6%. In three experiments (a field study, a greenhouse pot study and a hydroponics study) there were no significant differences in salinity tolerance between sodium accumulating and nonaccumulating A. canescens: both genotypes were highly salt tolerant. There was a significant buildup of sodium in the soil beneath sodium accumulating Atriplex plants, both in natural populations and on revegetated oil shale study plots. The sodium buildup was not sufficient to be detrimental to the growth or establishment of most herbaceous species, but with older Atriplex plants or with more saline soil, the buildup could potentially be detrimental. 14 references, 42 figures, 3 tables.

  1. Variation in copper and zinc tolerance and accumulation in 12 willow clones: implications for phytoextraction.

    PubMed

    Yang, Wei-dong; Wang, Yu-yan; Zhao, Feng-liang; Ding, Zhe-li; Zhang, Xin-cheng; Zhu, Zhi-qiang; Yang, Xiao-e

    2014-09-01

    Willows (Salix spp.) have shown high potential for the phytoextraction of heavy metals. This study compares variations in copper (Cu) and zinc (Zn) tolerance and accumulation potential among 12 willow clones grown in a nutrient solution treated with 50 μmol/L of Cu or Zn, respectively. The results showed differences in the tolerance and accumulation of Cu and Zn with respect to different species/clones. The biomass variation among clones in response to Cu or Zn exposure ranged from the stimulation of growth to inhibition, and all of the clones tested showed higher tolerance to Cu than to Zn. The clones exhibited less variation in Cu accumulation but larger variation in Zn accumulation. Based on translocation factors, it was found that most of the Cu was retained in the roots and that Zn was more mobile than Cu for all clones. It is concluded that most willow clones are good accumulators of Zn and Cu.

  2. Accumulation of dieldrin in an alga (Scenedesmus obliquus), Daphnia magna, and the guppy (Poecilia reticulata)

    USGS Publications Warehouse

    Reinert, Robert E.

    1972-01-01

    Scenedesmus obliquus, Daphnia magna, and Poecilia reticulata accumulated dieldrin directly from water; average concentration factors (concentration in organism, dry weight, divided by concentration in water) were 1282 for the alga, 13,954 for D. magna, and 49,307 (estimated) for the guppy. The amount accumulated by each species at equilibrium (after about 1.5, 3-4, and 18 days, respectively) was directly proportional to the concentration of dieldrin in the water. Daphnia magna and guppies accumulated more dieldrin from water than from food that had been exposed to similar concentrations in water. When guppies were fed equal daily rations of D. magna containing different concentrations of insecticide, the amounts of dieldrin accumulated by the fish were directly proportional to the concentration in D. magna; when two lots of guppies were fed different quantities of D. magna (10 and 20 organisms per day) containing identical concentrations of dieldrin, however, the amounts accumulated did not differ substantially.

  3. Variation in copper and zinc tolerance and accumulation in 12 willow clones: implications for phytoextraction*

    PubMed Central

    Yang, Wei-dong; Wang, Yu-yan; Zhao, Feng-liang; Ding, Zhe-li; Zhang, Xin-cheng; Zhu, Zhi-qiang; Yang, Xiao-e

    2014-01-01

    Willows (Salix spp.) have shown high potential for the phytoextraction of heavy metals. This study compares variations in copper (Cu) and zinc (Zn) tolerance and accumulation potential among 12 willow clones grown in a nutrient solution treated with 50 μmol/L of Cu or Zn, respectively. The results showed differences in the tolerance and accumulation of Cu and Zn with respect to different species/clones. The biomass variation among clones in response to Cu or Zn exposure ranged from the stimulation of growth to inhibition, and all of the clones tested showed higher tolerance to Cu than to Zn. The clones exhibited less variation in Cu accumulation but larger variation in Zn accumulation. Based on translocation factors, it was found that most of the Cu was retained in the roots and that Zn was more mobile than Cu for all clones. It is concluded that most willow clones are good accumulators of Zn and Cu. PMID:25183033

  4. Drivers of Holocene peatland carbon accumulation across a climate gradient in northeastern North America

    NASA Astrophysics Data System (ADS)

    Charman, Dan J.; Amesbury, Matthew J.; Hinchliffe, William; Hughes, Paul D. M.; Mallon, Gunnar; Blake, William H.; Daley, Tim J.; Gallego-Sala, Angela V.; Mauquoy, Dmitri

    2015-08-01

    Peatlands are an important component of the Holocene global carbon (C) cycle and the rate of C sequestration and storage is driven by the balance between net primary productivity and decay. A number of studies now suggest that climate is a key driver of peatland C accumulation at large spatial scales and over long timescales, with warmer conditions associated with higher rates of C accumulation. However, other factors are also likely to play a significant role in determining local carbon accumulation rates and these may modify past, present and future peatland carbon sequestration. Here, we test the importance of climate as a driver of C accumulation, compared with hydrological change, fire, nitrogen content and vegetation type, from records of C accumulation at three sites in northeastern North America, across the N-S climate gradient of raised bog distribution. Radiocarbon age models, bulk density values and %C measurements from each site are used to construct C accumulation histories commencing between 11,200 and 8000 cal. years BP. The relationship between C accumulation and environmental variables (past water table depth, fire, peat forming vegetation and nitrogen content) is assessed with linear and multivariate regression analyses. Differences in long-term rates of carbon accumulation between sites support the contention that a warmer climate with longer growing seasons results in faster rates of long-term carbon accumulation. However, mid-late Holocene accumulation rates show divergent trends, decreasing in the north but rising in the south. We hypothesise that sites close to the moisture threshold for raised bog distribution increased their growth rate in response to a cooler climate with lower evapotranspiration in the late Holocene, but net primary productivity declined over the same period in northern areas causing a decrease in C accumulation. There was no clear relationship between C accumulation and hydrological change, vegetation, nitrogen content

  5. Bioavailability of lab-contaminated and native polycyclic aromatic hydrocarbons to the amphipod Corophium volutator relates to chemical desorption.

    PubMed

    Kraaij, R H; Ciarelli, S; Tolls, J; Kater, B J; Belfroid, A

    2001-08-01

    In the present study, the relationship between bioavailability of polycyclic aromatic hydrocarbons (PAHs) to benthic amphipods and the PAH desorption kinetics was examined. To that end, field-contaminated sediment was treated in three different ways. One subsample had no addition of PAHs and contained native PAHs only. To a second subsample, six PAHs (phenanthrene, fluoranthene, anthracene, pyrene, benzo[b]fluoranthene, and benzo[k]fluoranthene) were added in the laboratory. Two of the PAHs were added at higher concentrations to a third subsample, serving as a control for concentration-dependent uptake. Marine amphipods (Corophium volutator) were exposed to the three subsamples for a maximum of 25 d and were subsequently analyzed. Desorption kinetics were determined for both the lab-contaminated and the native PAHs. The biota-to-sediment accumulation factor (BSAF) values of the individual native and lab-contaminated PAHs correlated well with the rapidly desorbing fraction (R2 = 0.76). The BSAFs were 1.4 to 3.3 higher for the lab-contaminated PAHs compared with the native PAHs, while the difference between the rapidly desorbing fractions was a factor of 1.1 to 1.8. The BSAFs of the lab-contaminated PAHs in the second and third subsample were equal, indicating concentration-independent accumulation. The results suggest that lab-contaminated PAHs are more available to amphipods than native PAHs and that differences in bioavailability of lab-contaminated and native PAHs to marine amphipods are related to differences in desorption behavior.

  6. Predicting bioaccumulation of polycyclic aromatic hydrocarbons in soft-shelled clams (Mya arenaria) using field deployments of polyethylene passive samplers.

    PubMed

    Fernandez, Loretta A; Gschwend, Philip M

    2015-05-01

    Biota-sediment accumulation factors (BSAF), frequently used to predict tissue concentrations of organisms living within and above sediments contaminated with hydrophobic organic chemicals, often produce inaccurate estimates. Hence, freely dissolved porewater concentrations, CW , have also been investigated as predictors of organism tissue concentrations, but they are more difficult to measure than bulk sediment concentrations (used with BSAF). In situ passive sampling methods, however, make it possible to deduce CW with less effort than required to measure the value directly and make it possible to relate CW with tissue concentrations of undisturbed, native organisms. In the present study, polyethylene passive samplers containing performance reference compounds (d10-phenanthrene, d10-pyrene, and d12-chrysene) were deployed in diverse sediment beds near Boston, Massachusetts, USA, for a 1-wk period. Clams (Mya arenaria) and sediments were then collected from the deployed sediment beds. Concentrations of 3 polycyclic aromatic hydrocarbons (PAHs; phenanthrene, pyrene, and chrysene) were measured in the porewaters, in clam tissues, and in the bulk sediment. Biota-sediment accumulation factors and polyethylene-deduced CW were used to predict organism tissue concentrations. Ratios of predicted-to-measured values showed that the BSAF method over-predicted tissue concentrations in M. arenaria by up to 2 orders of magnitude. The polyethylene-deduced CW method resulted in average ratios closer to 1 (0.43 ± 0.26, 3.7 ± 2.5, and 1.1 ± 1.2 for phenanthrene, pyrene, and chrysene, respectively, N = 26, uncertainty = ± 1σ).

  7. Bioaccumulation of perfluoroalkyl acids by earthworms (Eisenia fetida) exposed to contaminated soils.

    PubMed

    Rich, Courtney D; Blaine, Andrea C; Hundal, Lakhwinder; Higgins, Christopher P

    2015-01-20

    The presence of perfluoroalkyl acids (PFAAs) in biosolids-amended and aqueous film-forming foam (AFFF)-impacted soils results in two potential pathways for movement of these environmental contaminants into terrestrial foodwebs. Uptake of PFAAs by earthworms (Eisenia fetida) exposed to unspiked soils with varying levels of PFAAs (a control soil, an industrially impacted biosolids-amended soil, a municipal biosolids-amended soil, and two AFFF-impacted soils) was measured. Standard 28 day exposure experiments were conducted in each soil, and measurements taken at additional time points in the municipal soil were used to model the kinetics of uptake. Uptake and elimination rates and modeling suggested that steady state bioaccumulation was reached within 28 days of exposure for all PFAAs. The highest concentrations in the earthworms were for perfluorooctane sulfonate (PFOS) in the AFFF-impacted Soil A (2160 ng/g) and perfluorododecanoate (PFDoA) in the industrially impacted soil (737 ng/g). Wet-weight (ww) and organic carbon (OC)-based biota soil accumulation factors (BSAFs) for the earthworms were calculated after 28 days of exposure for all five soils. The highest BSAF in the industrially impacted soil was for PFDoA (0.42 goc/gww,worm). Bioaccumulation factors (BAFs, dry-weight-basis, dw) were also calculated at 28 days for each of the soils. With the exception of the control soil and perfluorodecanoate (PFDA) in the industrially impacted soil, all BAF values were above unity, with the highest being for perfluorohexanesulfonate (PFHxS) in the AFFF-impacted Soil A (139 gdw,soil/gdw,worm). BSAFs and BAFs increased with increasing chain length for the perfluorocarboxylates (PFCAs) and decreased with increasing chain length for the perfluoroalkyl sulfonates (PFSAs). The results indicate that PFAA bioaccumulation into earthworms depends on soil concentrations, soil characteristics, analyte, and duration of exposure, and that accumulation into earthworms may be a potential

  8. Calmodulin-binding protein CBP60g functions as a negative regulator in Arabidopsis anthocyanin accumulation

    PubMed Central

    Zou, Bo; Wan, Dongli; Li, Ruili; Han, Xiaomin; Li, Guojing; Wang, Ruigang

    2017-01-01

    Anthocyanins, a kind of flavonoid, normally accumulate in the flowers and fruits and make them colorful. Anthocyanin accumulation is regulated via the different temporal and spatial expression of anthocyanin regulatory and biosynthetic genes. CBP60g, a calmodulin binding protein, has previously been shown to have a role in pathogen resistance, drought tolerance and ABA sensitivity. In this study, we found that CBP60g repressed anthocyanin accumulation induced by drought, sucrose and kinetin. The expression pattern of CBP60g was in accordance with the anthocyanin accumulation tissues. Real-time qPCR analysis revealed that the anthocyanin biosynthetic genes CHS, CHI and DFR, as well as two members of MBW complex, PAP1, a MYB transcription factor, and TT8, a bHLH transcription factor, were down regulated by CBP60g. PMID:28253311

  9. Comparison of field and laboratory exposures of Lumbriculus variegatus to polychlorinated biphenyl-impacted river sediments.

    PubMed

    Beckingham, Barbara; Ghosh, Upal

    2010-12-01

    A method is described for conducting 14-d in situ sediment bioaccumulation tests with the freshwater oligochaete Lumbriculus variegatus, at the bottom of a slow-flowing river. The in situ test exposure chambers were constructed from cylindrical plastic tubes with flow-through mesh screens and were attached to a wire basket that was weighted to the river bottom at seven sites in the lower Grasse River in New York State, USA. This design was successful in exposing L. variegatus to native sediment and overlying water under field conditions, with adequate organism mass recovery (87 ± 19%). Results compared well with ex situ laboratory bioaccumulation conducted in parallel, expressed in terms of tissue concentration, biota-sediment accumulation factors (BSAFs), and bioaccumulation factors (BAFs). Bioaccumulation of polychlorinated biphenyls (PCBs) in L. variegatus (µg PCB/g wet wt) in laboratory and field tests was found to be within a factor of 2. The small variation between in situ and ex situ may have been caused by differences in water exchange rate under the two exposure scenarios, or other factors affecting organism behavior. Values of BSAF showed a hyperbolic trend with K(OW) , peaking at BSAF of 7 for congeners with log K(OW) of 6. Bioaccumulation factors also peaked at a value of 10(6.5) for congeners with log K(OW) value of 6 but remained steady around that value for the higher K(OW) congeners. These observations may reflect under-equilibration or reduced bioavailability of more hydrophobic PCBs in worm tissues or other analytical artifacts.

  10. Processes of contaminant accumulation in an Arctic beluga whale population

    SciTech Connect

    Hickie, B.E.; Muir, D.; Kingsley, M.

    1995-12-31

    As long-lived top predators in marine food chains, marine mammals accumulate high levels of persistent organic contaminants. While arctic marine mammal contaminant concentrations are lower than those from temperate regions, levels are sufficiently high to be a health concern to people who rely on marine mammals as food. Monitoring programs developed to address this problem and to define spatial and temporal trends often are difficult to interpret since tissue contaminant concentrations vary with species, age, sex, reproductive effort, and condition (ie blubber thickness). It can be difficult to relate contaminant concentrations in other environmental compartments to those in marine mammals since their residues reflect exposure over their entire life, often 20 to 30 years. Contaminant accumulation models for marine mammals enable us to better understand the importance of, and interaction between, factors affecting contaminant accumulation, and can provide a dynamic framework for interpreting contaminant monitoring data. The authors developed two models for the beluga whale (Delphinapterus leucas): one provides a detailed view of processes at the individual level, the other examines population-based processes. The models quantify uptake, release and disposition of organic contaminants over their entire lifespan by incorporating all aspects of life-history. These models are used together to examine impact of a variety of factors on patterns and variability of PCBs found in the West Greenland beluga population (sample size: 696, 729). Factors examined include: energetics, growth, birth rate, lactation, contaminant assimilation and clearance rates, and dietary contaminant concentrations. Results are discussed in relation to the use of marine mammals for monitoring contaminant trends.

  11. Geomorphic control of landscape carbon accumulation

    USGS Publications Warehouse

    Rosenbloom, N.A.; Harden, J.W.; Neff, J.C.; Schimel, D.S.

    2006-01-01

    We use the CREEP process-response model to simulate soil organic carbon accumulation in an undisturbed prairie site in Iowa. Our primary objectives are to identify spatial patterns of carbon accumulation, and explore the effect of erosion on basin-scale C accumulation. Our results point to two general findings. First, redistribution of soil carbon by erosion results in a net increase in basin-wide carbon storage relative to a noneroding environment. Landscape-average mean residence times are increased in an eroding landscape owing to the burial/preservation of otherwise labile C. Second, field observations taken along a slope transect may overlook significant intraslope variations in carbon accumulation. Spatial patterns of modeled deep C accumulation are complex. While surface carbon with its relatively short equilibration time is predictable from surface properties, deep carbon is strongly influenced by the landscape's geomorphic and climatic history, resulting in wide spatial variability. Convergence and divergence associated with upland swales and interfluves result in bimodal carbon distributions in upper and mid slopes; variability in carbon storage within modeled mid slopes was as high as simulated differences between erosional shoulders and depositional valley bottoms. The bimodality of mid-slope C variability in the model suggests that a three-dimensional sampling strategy is preferable over the traditional two-dimensional analog or "catena" approach. Copyright 2006 by the American Geophysical Union.

  12. Chronic Psychological Stress Induces the Accumulation of Myeloid-Derived Suppressor Cells in Mice

    PubMed Central

    Cao, Junxia; Zhang, Xueying; Zhu, Ting; Zhang, Dalin; Wang, Wendie; Wang, Jing; Shen, Beifen; Gao, Xu; Shi, Yanchun; Zhang, Jiyan

    2013-01-01

    Chronic psychological stress has been shown to adversely impact immune system functions and compromise host defenses against various infections. However, the underlying mechanisms remain elusive. Recent studies have demonstrated that myeloid-derived suppressor cells (MDSCs) play an important role in regulating immunity. It is of interest to explore whether or not chronic psychological stress plays immunosuppressive functions partially by inducing MDSCs accumulation. In this work, we report that chronic psychological stress led to the accumulation of CD11b+Gr1+ cells in the bone marrow of BALB/c mice. Repeated β-agonist infusion showed no such effect. However, β-adrenergic blockade, but not glucocorticoids blockade, partially reversed the accumulation of CD11b+Gr1+ cells under the condition of chronic psychological stress, suggesting catecholamines collaborate with other factors to induce the accumulation. Further exploration indicates that cyclooxygenase 2 (COX-2)-prostaglandin E2 (PGE2) loop might act downstream to induce the accumulation. A majority of the accumulated CD11b+Gr1+ cells were Ly6G+Ly6Clow immature neutrophils, which inhibited cytokine release of macrophages as well as T cell responsiveness. Moreover, the accumulated CD11b+Gr1+ cells under the condition of chronic psychological stress expressed multiple inhibitory molecules. Taken together, our data demonstrate for the first time that chronic psychological stress induces MDSCs accumulation in mice, which can contribute to immunosuppression. PMID:24058577

  13. Fatigue damage accumulation in steel 45 under loading regimes involving low-cycle overloads

    NASA Astrophysics Data System (ADS)

    Shlyushenkov, A. P.; Tatarintsev, V. A.

    1994-05-01

    The paper presents the results of experimental investigations into the regularities of fatigue damage accumulation in steel 45 under block loading involving elastoplastic (low-cycle) overloads. The experiments were carried out using the methods of the factorial design theory. Mathematical models are developed for damage accumulation depending on the variation of the parameters (factors) investigated: the level of the main (elastic) strain, the relative level of overloads, and their relative number.

  14. Accumulation of anthocyanins in tomato skin extends shelf life.

    PubMed

    Bassolino, Laura; Zhang, Yang; Schoonbeek, Henk-Jan; Kiferle, Claudia; Perata, Pierdomenico; Martin, Cathie

    2013-11-01

    Shelf life is one of the most important traits for the tomato (Solanum lycopersicum) industry. Two key factors, post-harvest over-ripening and susceptibility to post-harvest pathogen infection, determine tomato shelf life. Anthocyanins accumulate in the skin of Aft/Aft atv/atv tomatoes, the result of introgressing alleles affecting anthocyanin biosynthesis in fruit from two wild relatives of tomato, which results in extended fruit shelf life. Compared with ordinary, anthocyanin-less tomatoes, the fruits of Aft/Aft atv/atv keep longer during storage and are less susceptible to Botrytis cinerea, a major tomato pathogen, post-harvest. Using genetically modified tomatoes over-producing anthocyanins, we confirmed that skin-specific accumulation of anthocyanins in tomato is sufficient to reduce the susceptibility of fruit to Botrytis cinerea. Our data indicate that accumulation of anthocyanins in tomato fruit, achieved either by traditional breeding or genetic engineering can be an effective way to extend tomato shelf life.

  15. Accumulation of vitamin E in potato (Solanum tuberosum) tubers.

    PubMed

    Crowell, Elizabeth F; McGrath, J Mitchell; Douches, David S

    2008-04-01

    Vitamin E (tocopherol) is a powerful antioxidant essential for human health and synthesized only by photosynthetic organisms. The effects of over-expression of tocopherol biosynthetic enzymes have been studied in leaves and seeds, but not in a non-photosynthetic, below-ground plant organ. Genetic and molecular approaches were used to determine if increased levels of tocopherols can be accumulated in potato (Solanum tuberosum L.) tubers through metabolic engineering. Two transgenes were constitutively over-expressed in potato: Arabidopsis thaliana p-hydroxyphenylpyruvate dioxygenase (At-HPPD) and A. thaliana homogentisate phytyltransferase (At-HPT). alpha-Tocopherol levels in the transgenic plants were determined by high-performance liquid chromatography. In potato tubers, over-expression of At-HPPD resulted in a maximum 266% increase in alpha-tocopherol, and over-expression of At-HPT yielded a 106% increase. However, tubers from transgenic plants still accumulated approximately 10- and 100-fold less alpha-tocopherol than leaves or seeds, respectively. The results indicate that physiological and regulatory constraints may be the most limiting factors for tocopherol accumulation in potato tubers. Studying regulation and induction of tocopherol biosynthesis should reveal approaches to more effectively engineer crops with enhanced tocopherol content.

  16. Naturally Ocurring Polyphosphate-accumulating Bacteria in Benthic Biofilms

    NASA Astrophysics Data System (ADS)

    Locke, N. A.; Saia, S. M.; Walter, M. T.; Carrick, H. J.; Buda, A. R.; Regan, J. M.

    2014-12-01

    Polyphosphate accumulating organisms (PAOs), known to store excess phosphorus (P) as polyphosphate (poly-P), influence P transport in the environment. Enhanced biological phosphorus removal (EBPR) from wastewater has long served as a basis to study bacterial PAOs, yet little research has genetically identified similar organisms in natural settings. Aerobic/anaerobic cycles, used to select for PAOs in EBPR, can result from changing environmental conditions such as night/day cycles for benthic biofilms. Benthic biofilms from eight Pennsylvanian streams were studied for naturally-occurring bacterial PAOs similar to those typically found in EBPR systems. PAOs were confirmed in the benthic biofilms by a characteristic yellow fluorescent emission from DAPI staining. Cells containing yellow fluorescence were separated from the rest of the sample using a flow cytometer, resulting in a physically enriched culture of PAOs from the benthic biofilms. Amplicon-based metagenomic sequencing will reveal the phylogeny of bacteria responsible for poly-P accumulation in these benthic biofilms. Sequencing data will be used to develop fluorescent in-situ hybridization (FISH) probes, and hybridizations will be performed on DAPI-stained cells to confirm poly-P accumulation by targeted phylotypes. Identifying PAOs in natural settings is a critical step towards studying environments that support high concentrations of PAOs, serving as significant factors in the P cycle. PAOs can then be connected to P transport models to help understand and mitigate P pollution in agricultural watersheds.

  17. Mechanisms underlying 18F-fluorodeoxyglucose accumulation in colorectal cancer

    PubMed Central

    Kawada, Kenji; Iwamoto, Masayoshi; Sakai, Yoshiharu

    2016-01-01

    Positron emission tomography (PET) with 18F-fluorodeoxyglucose (FDG) is a diagnostic tool to evaluate metabolic activity by measuring accumulation of FDG, an analogue of glucose, and has been widely used for detecting small tumors, monitoring treatment response and predicting patients’ prognosis in a variety of cancers. However, the molecular mechanism of FDG accumulation into tumors remains to be investigated. It is well-known that most cancers are metabolically active with elevated glucose metabolism, a phenomenon known as the Warburg effect. The underlying mechanisms for elevated glucose metabolism in cancer tissues are complex. Recent reports have indicated the potential of FDG-PET/CT scans in predicting mutational status (e.g., KRAS gene mutation) of colorectal cancer (CRC), which suggests that FDG-PET/CT scans may play a key role in determining therapeutic strategies by non-invasively predicting treatment response to anti-epidermal growth factor receptor (EGFR) therapy. In this review, we summarize the current findings investigating the molecular mechanism of 18F-FDG accumulation in CRC. PMID:27928469

  18. Identification of genes associated with chlorophyll accumulation in flower petals.

    PubMed

    Ohmiya, Akemi; Hirashima, Masumi; Yagi, Masafumi; Tanase, Koji; Yamamizo, Chihiro

    2014-01-01

    Plants have an ability to prevent chlorophyll accumulation, which would mask the bright flower color, in their petals. In contrast, leaves contain substantial amounts of chlorophyll, as it is essential for photosynthesis. The mechanisms of organ-specific chlorophyll accumulation are unknown. To identify factors that determine the chlorophyll content in petals, we compared the expression of genes related to chlorophyll metabolism in different stages of non-green (red and white) petals (very low chlorophyll content), pale-green petals (low chlorophyll content), and leaves (high chlorophyll content) of carnation (Dianthus caryophyllus L.). The expression of many genes encoding chlorophyll biosynthesis enzymes, in particular Mg-chelatase, was lower in non-green petals than in leaves. Non-green petals also showed higher expression of genes involved in chlorophyll degradation, including STAY-GREEN gene and pheophytinase. These data suggest that the absence of chlorophylls in carnation petals may be caused by the low rate of chlorophyll biosynthesis and high rate of degradation. Similar results were obtained by the analysis of Arabidopsis microarray data. In carnation, most genes related to chlorophyll biosynthesis were expressed at similar levels in pale-green petals and leaves, whereas the expression of chlorophyll catabolic genes was higher in pale-green petals than in leaves. Therefore, we hypothesize that the difference in chlorophyll content between non-green and pale-green petals is due to different levels of chlorophyll biosynthesis. Our study provides a basis for future molecular and genetic studies on organ-specific chlorophyll accumulation.

  19. Dust Accumulation on MER Solar Panels

    NASA Astrophysics Data System (ADS)

    Guinness, E. A.; Arvidson, R. E.; McEwen, A. S.; Cull, S.

    2011-12-01

    HiRISE acquired in March 2011 a color image of the Spirit Mars Exploration Rover from orbit that shows an exceptionally bright reflection from the rover solar panels. HiRISE data combined with laboratory measurements of MER solar cell reflectance provide a method for constraining the thickness of dust on the solar panels. Spirit is the brightest object in the HiRISE scene with a reflectance that is about 3 times higher at 500 nm and about 1.5 times higher at 700 and 850 nm than bright outcrop and soil near the rover. The rover is also less red than these nearby materials and less red than a typical Mars dust spectrum modeled with the same geometry and seen through similar atmospheric conditions as the HiRISE image. Lighting and viewing angles for the HiRISE image of Spirit are close to a specular reflection geometry when factoring in the rover orientation, the sun position, and the location of HiRISE during image acquisition. Laboratory photometric measurements of clean and dust-coated MER solar cells show a strong specular reflection for dust coating thicknesses up to at least 45 micrometers. The specular reflection was not present in the laboratory data when the solar cell was covered with about a 135 micrometer thick layer. The dust used in the experiments consisted of less than 10 micrometer sized particles derived from a palagonitic tephra from Mauna Kea that is spectrally similar to Mars dust. A survey of MER Pancam color images acquired by Spirit and Opportunity also shows several examples of specular reflections from the solar panels. These examples correspond to times when the solar cells were moderately clean to dusty as inferred from the amount of power generated by the cells. Specular reflections in Pancam images have been observed when the solar cell output was only 45% that of a dust-free cell. Spirit HiRISE data indicate that the rover was not covered by an optical thick layer of dust because some of the reflected light must have come from the

  20. Cohabitation history, marriage, and wealth accumulation.

    PubMed

    Vespa, Jonathan; Painter, Matthew A

    2011-08-01

    This study extends research on the relationship between wealth accumulation and union experiences, such as marriage and cohabitation. Using data from the National Longitudinal Survey of Youth 1979, we explore the wealth trajectories of married individuals in light of their premarital cohabitation histories. Over time, marriage positively correlates with wealth accumulation. Most married persons with a premarital cohabitation history have wealth trajectories that are indistinguishable from those without cohabitation experience, with one exception: individuals who marry their one and only cohabiting partner experience a wealth premium that is twice as large as that for married individuals who never cohabited prior to marrying. Results remain robust over time despite cohabiters' selection out of marriage, yet vary by race/ethnicity. We conclude that relationship history may shape long-term wealth accumulation, and contrary to existing literature, individuals who marry their only cohabiting partners experience a beneficial marital outcome. It is therefore important to understand the diversity of cohabitation experiences among the married.

  1. Ordinary differential equation for local accumulation time.

    PubMed

    Berezhkovskii, Alexander M

    2011-08-21

    Cell differentiation in a developing tissue is controlled by the concentration fields of signaling molecules called morphogens. Formation of these concentration fields can be described by the reaction-diffusion mechanism in which locally produced molecules diffuse through the patterned tissue and are degraded. The formation kinetics at a given point of the patterned tissue can be characterized by the local accumulation time, defined in terms of the local relaxation function. Here, we show that this time satisfies an ordinary differential equation. Using this equation one can straightforwardly determine the local accumulation time, i.e., without preliminary calculation of the relaxation function by solving the partial differential equation, as was done in previous studies. We derive this ordinary differential equation together with the accompanying boundary conditions and demonstrate that the earlier obtained results for the local accumulation time can be recovered by solving this equation.

  2. Comprehensive model of damage accumulation in silicon

    SciTech Connect

    Mok, K. R. C.; Benistant, F.; Jaraiz, M.; Rubio, J. E.; Castrillo, P.; Pinacho, R.; Srinivasan, M. P.

    2008-01-01

    Ion implantation induced damage accumulation is crucial to the simulation of silicon processing. We present a physically based damage accumulation model, implemented in a nonlattice atomistic kinetic Monte Carlo simulator, that can simulate a diverse range of interesting experimental observations. The model is able to reproduce the ion-mass dependent silicon amorphous-crystalline transition temperature of a range of ions from C to Xe, the amorphous layer thickness for a range of amorphizing implants, the superlinear increase in damage accumulation with dose, and the two-layered damage distribution observed along the path of a high-energy ion. In addition, this model is able to distinguish between dynamic annealing and post-cryogenic implantation annealing, whereby dynamic annealing is more effective in removing damage than post-cryogenic implantation annealing at the same temperature.

  3. Ionizing radiation increases systemic nanoparticle tumor accumulation

    PubMed Central

    Giustini, A.J.; Petryk, A.A.; Hoopes, P.J.

    2012-01-01

    Nanoparticle-based therapies are currently being explored for both the imaging and treatment of primary and metastatic cancers. Effective nanoparticle cancer therapy requires significant accumulations of nanoparticles within the tumor environment. Various techniques have been used to improve tumor nanoparticle uptake and biodistribution. Most notable of these techniques are the use of tumor-specific-peptide-conjugated nanoparticles and chemical modification of the nanoparticles with immune-evading polymers. Another strategy for improving the tumor uptake of the nanoparticles is modification of the tumor microenvironment with a goal of enhancing the enhanced permeability and retention effect inherent to solid tumors. We demonstrate a two-fold increase in the tumor accumulation of systemically delivered iron oxide nanoparticles following a single, 15 Gy radiation dose in a syngeneic mouse breast tumor model. This increase in nanoparticle tumor accumulation correlates with a radiation-induced decrease in tumor interstitial pressure and a subsequent increase in vascular permeability. PMID:22633900

  4. Landscape Evolution and Carbon Accumulation: Uniformitarianism Revisited

    NASA Astrophysics Data System (ADS)

    Rosenbloom, N. A.; Harden, J. W.; Neff, J. C.; Schimel, D. S.

    2003-12-01

    What is the role of hillslope transport in long-term carbon accumulation in soils? How do parent material, climate, and landform interact to produce the landscapes we observe today and to what extent can we use present day conditions to infer the dominant processes of the past? We use the CREEP [Rosenbloom, N.A. et al., 2001] process-response model to ask these questions, exploring the time-evolution of landscape form, soil distribution, and carbon accumulation in an undisturbed prairie site in western Iowa [Harden, J.W. et al., 2002]. The CREEP model simulates differential transport of soil particles, blanket deposition of atmospheric 10Be with eolian dust, and passive advection of soil carbon and 10Be, enabling the preferential enrichment and burial of rapidly moving soil constituents. By comparing landscape-wide average accumulations of 10Be to borehole observations at three hillslope positions, we conclude that the distribution of clay-adsorbed 10Be cannot be explained by co-transport with clay particles alone. Rather, 10Be appears to behave as a more complex tracer than originally assumed, requiring an explicit, independent parameterization of wet deposition and transport. By comparison, model carbon accumulation strongly reflects patterns of clay redistribution indicating that in situ carbon turnover is faster than redistribution. Observed vertical distributions of soil properties, including 10Be, could only be explained by assuming variations in deposition and erosion rates, specifically periods of accumulation, followed by periods of transport. This effect might not be apparent if only landform shape, geometry, and soil depth were considered and vertical distributions of soil properties were not explicitly simulated. The current landscape reflects a history of strong shifts in erosion and accumulation rates that cannot be simulated using a uniform parameterization of long-term landscape-evolution processes.

  5. GREEN FLUORESCENT PIGMENT ACCUMULATED BY A MUTANT OF CELLVIBRIO GILVUS.

    PubMed

    LOVE, S H; HULCHER, F H

    1964-01-01

    Love, Samuel H. (Bowman Gray School of Medicine, Winston-Salem, N.C.), and Frank H. Hulcher. Green fluorescent pigment accumulated by a mutant of Cellvibrio gilvus. J. Bacteriol. 87:39-45. 1964.-A mutant of Cellvibrio gilvus, designated strain 139A, liberated a green, fluorescent pigment into the surrounding culture medium. A study of the factors which affected the accumulation of this pigment led to the development of a chemically defined medium which supported maximal pigment accumulation in aerated, liquid cultures. d-Glucose, glycine or l-serine, l-phenylalanine, l-proline, and l-lysine comprised the organic components of this medium. The visible absorption spectrum of the pigment showed a maximal band at 400 mmu (pH 7.0). A difference spectrum between reduced and oxidized pigment showed loss of the band at 400 mmu upon oxidation. However, a methanol-extractable, flavinelike compound occurred in the wild strain but not in the mutant. Ferric ions added to the defined medium stimulated growth, with a concomitant reduction of pigment accumulation. Pigment was formed at a maximal rate during the stationary growth phase, and the highest yield was obtained by 18 hr. Organic solvents did not extract the pigment from water solutions. One and sometimes two, compounds absorbing at 400 mmu could be eluted by ion-exchange chromatography on Cellex-P (H(+)), which was used to separate the pigment from other components in the culture supernatants so that the radioactivity of the pigment could be measured. The mutant synthesized C(14)-labeled pigment from d-glucose-U-C(14) and from each of four amino acids (glycine-1-C(14), l-phenylalanine-U-C(14), l-proline-U-C(14), and l-lysine-U-C(14). Delta-Amino-levulenic acid-4-C(14) did not contribute C(14) to the pigment.

  6. [Beijing common green tree leaves' accumulation capacity for heavy metals].

    PubMed

    Li, Shao-Ning; Kong, Ling-Wei; Lu, Shao-Wei; Chen, Bo; Gao, Chen; Shi, Yuan

    2014-05-01

    Seasonal variation of heavy metal contents in leaves and their relationships with soil heavy metal pollution levels were studied through measuring and analyzing the leaves of the common tree species in Beijing and soil heavy metal contents, to detect heavy metal accumulation ability of plant leaves. The results showed that: (1) the contents of Cu, Pb, Zn in plant leaves first decreased and then increased, again declined with changing the seasons (from spring to winter). Cr concentration showed the trend of first increase and then decrease from spring to winter, and the highest in the autumn; the accumulation capacities of Cu for Babylonica and Japonica were higher in the spring, summer and autumn, while Tabuliformis was in winter; the higher accumulation capacities for Cr, Pb were Japonica and Platycladus, and in winter were Platycladus and Bungeana; the higher accumulation capacities for Zn were Babylonica and Bungeana, while Platycladus in winter; (2) the pollution degree of four kinds of heavy metals (Cu, Cr, Pb, Zn) from downtown to suburbs showed that: Jingshan (C =2.48, C is contamination factor) > Olympic (C = 1.27) > Songshan (C = 1.20) > Shuiguan (C = 1. 18); (3) the heavy metals concentration of same plant leaves in the water of the Great Wall changed larger, but those in the other three areas showed that: Jingshan > Olympic > Songshan; the ability of same species leaf to absorb different sorts of heavy metals showed that: Zn >Cu >Pb >Cr; the difference between Zn content and Cr content was significant (P <0.01); (4) the relationship between heavy metal content in plant leaves and soil heavy metal pollution levels presented a quadratic polynomial relation; the significant correlation was found between other three heavy metal contents of plant samples and soil samples, but they were not the case for the Cu, and the correlation coefficients were above 0. 9.

  7. Exploring the Cellular Accumulation of Metal Complexes

    PubMed Central

    Puckett, Cindy A.; Ernst, Russell J.; Barton, Jacqueline K.

    2010-01-01

    Transition metal complexes offer great potential as diagnostic and therapeutic agents, and a growing number of biological applications have been explored. To be effective, these complexes must reach their intended target inside the cell. Here we review the cellular accumulation of metal complexes, including their uptake, localization, and efflux. Metal complexes are taken up inside cells through various mechanisms, including passive diffusion and entry through organic and metal transporters. Emphasis is placed on the methods used to examine cellular accumulation, to identify the mechanism(s) of uptake, and to monitor possible efflux. Conjugation strategies that have been employed to improve the cellular uptake characteristics of metal complexes are also described. PMID:20104335

  8. RF SYSTEM FOR THE SNS ACCUMULATOR RING.

    SciTech Connect

    BLASKIEWICZ, M.; BRENNAN, J.M.; BRODOWSKI, J.; DELONG, J.; METH, M.; SMITH, K.; ZALTSMAN, A.

    2001-06-18

    During accumulation the RF beam current in the spallation neutron source ring rises from 0 to 50 amperes. A clean, 250 nanosecond gap is needed for the extraction kicker risetime. Large momentum spread and small peak current are needed to prevent instabilities and stopband related losses. A robust RF system meeting these requirements has been designed.

  9. Plastic accumulation in the Mediterranean sea.

    PubMed

    Cózar, Andrés; Sanz-Martín, Marina; Martí, Elisa; González-Gordillo, J Ignacio; Ubeda, Bárbara; Gálvez, José Á; Irigoien, Xabier; Duarte, Carlos M

    2015-01-01

    Concentrations of floating plastic were measured throughout the Mediterranean Sea to assess whether this basin can be regarded as a great accumulation region of plastic debris. We found that the average density of plastic (1 item per 4 m2), as well as its frequency of occurrence (100% of the sites sampled), are comparable to the accumulation zones described for the five subtropical ocean gyres. Plastic debris in the Mediterranean surface waters was dominated by millimeter-sized fragments, but showed a higher proportion of large plastic objects than that present in oceanic gyres, reflecting the closer connection with pollution sources. The accumulation of floating plastic in the Mediterranean Sea (between 1,000 and 3,000 tons) is likely related to the high human pressure together with the hydrodynamics of this semi-enclosed basin, with outflow mainly occurring through a deep water layer. Given the biological richness and concentration of economic activities in the Mediterranean Sea, the affects of plastic pollution on marine and human life are expected to be particularly frequent in this plastic accumulation region.

  10. 19 CFR 10.917 - Accumulation.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 19 Customs Duties 1 2012-04-01 2012-04-01 false Accumulation. 10.917 Section 10.917 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Peru Trade Promotion...

  11. 19 CFR 10.917 - Accumulation.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 19 Customs Duties 1 2013-04-01 2013-04-01 false Accumulation. 10.917 Section 10.917 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Peru Trade Promotion...

  12. 19 CFR 10.917 - Accumulation.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 19 Customs Duties 1 2014-04-01 2014-04-01 false Accumulation. 10.917 Section 10.917 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Peru Trade Promotion...

  13. 19 CFR 10.1017 - Accumulation.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 19 Customs Duties 1 2012-04-01 2012-04-01 false Accumulation. 10.1017 Section 10.1017 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Korea Free Trade Agreement...

  14. 19 CFR 10.1017 - Accumulation.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 19 Customs Duties 1 2014-04-01 2014-04-01 false Accumulation. 10.1017 Section 10.1017 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Korea Free Trade Agreement...

  15. 19 CFR 10.1017 - Accumulation.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 19 Customs Duties 1 2013-04-01 2013-04-01 false Accumulation. 10.1017 Section 10.1017 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Korea Free Trade Agreement...

  16. 19 CFR 10.597 - Accumulation.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 19 Customs Duties 1 2010-04-01 2010-04-01 false Accumulation. 10.597 Section 10.597 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. Dominican Republic-Central...

  17. 19 CFR 10.772 - Accumulation.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 19 Customs Duties 1 2010-04-01 2010-04-01 false Accumulation. 10.772 Section 10.772 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Morocco Free Trade...

  18. Plastic Accumulation in the Mediterranean Sea

    PubMed Central

    Cózar, Andrés; Sanz-Martín, Marina; Martí, Elisa; González-Gordillo, J. Ignacio; Ubeda, Bárbara; Gálvez, José Á.; Irigoien, Xabier; Duarte, Carlos M.

    2015-01-01

    Concentrations of floating plastic were measured throughout the Mediterranean Sea to assess whether this basin can be regarded as a great accumulation region of plastic debris. We found that the average density of plastic (1 item per 4 m2), as well as its frequency of occurrence (100% of the sites sampled), are comparable to the accumulation zones described for the five subtropical ocean gyres. Plastic debris in the Mediterranean surface waters was dominated by millimeter-sized fragments, but showed a higher proportion of large plastic objects than that present in oceanic gyres, reflecting the closer connection with pollution sources. The accumulation of floating plastic in the Mediterranean Sea (between 1,000 and 3,000 tons) is likely related to the high human pressure together with the hydrodynamics of this semi-enclosed basin, with outflow mainly occurring through a deep water layer. Given the biological richness and concentration of economic activities in the Mediterranean Sea, the affects of plastic pollution on marine and human life are expected to be particularly frequent in this plastic accumulation region. PMID:25831129

  19. Genetics Home Reference: actin-accumulation myopathy

    MedlinePlus

    ... fibers and are important for muscle contraction. Attachment (binding) and release of the overlapping thick and thin filaments allows them to move relative to each other so that the muscles can contract. ACTA1 gene mutations that cause actin-accumulation myopathy ...

  20. 19 CFR 10.772 - Accumulation.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 19 Customs Duties 1 2011-04-01 2011-04-01 false Accumulation. 10.772 Section 10.772 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Morocco Free Trade...

  1. 19 CFR 10.772 - Accumulation.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 19 Customs Duties 1 2014-04-01 2014-04-01 false Accumulation. 10.772 Section 10.772 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Morocco Free Trade...

  2. 19 CFR 10.772 - Accumulation.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 19 Customs Duties 1 2012-04-01 2012-04-01 false Accumulation. 10.772 Section 10.772 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Morocco Free Trade...

  3. 19 CFR 10.772 - Accumulation.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 19 Customs Duties 1 2013-04-01 2013-04-01 false Accumulation. 10.772 Section 10.772 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Morocco Free Trade...

  4. Hippocampal Networks Habituate as Novelty Accumulates

    ERIC Educational Resources Information Center

    Murty, Vishnu P.; Ballard, Ian C.; Macduffie, Katherine E.; Krebs, Ruth M.; Adcock, R. Alison

    2013-01-01

    Novelty detection, a critical computation within the medial temporal lobe (MTL) memory system, necessarily depends on prior experience. The current study used functional magnetic resonance imaging (fMRI) in humans to investigate dynamic changes in MTL activation and functional connectivity as experience with novelty accumulates. fMRI data were…

  5. 19 CFR 10.458 - Accumulation.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Chile Free Trade Agreement Rules of Origin § 10.458 Accumulation. (a) Originating goods or materials of Chile or the United States... of Chile, the United States, or both, by one or more producers, will be considered as an...

  6. Copper accumulation in the crayfish (Orconectes rusticus)

    SciTech Connect

    Evans, M.L.

    1980-06-01

    The purpose of this study was to determine whether or not the crayfish, O. rusticus could fulfill Nehring's (1976) criteria for a good biological monitor of heavy metal pollution. Since there is some evidence that the cupric ion is the most toxic form of aqueous copper, crayfish-accumulated copper was compared to both total and cupric copper in the culture water.

  7. Spatial variation in rates of carbon and nitrogen accumulation in a boreal bog

    SciTech Connect

    Ohlson, M.; Oekland, R.H.

    1998-12-01

    Although previous studies hint at the occurrence of substantial spatial variation in the accumulation rates of C and N in bogs, the extent to which rates may vary on high-resolution spatial and temporal scales is not known. A main reason for the lack of knowledge is that it is problematic to determine the precise age of peat at a given depth. The authors determined rates of carbon and nitrogen accumulation in the uppermost decimeters of a bog ecosystem using the pine method, which enables accurate dating of surface peat layers. They combined accumulation data with numerical and geostatistical analyses of the recent vegetation to establish the relationship between bog vegetation and rate of peat accumulation. Use of a laser technique for spatial positioning of 151 age-determined peat cores within a 20 x 20 m plot made it possible to give the first tine-scaled account of spatial and temporal variation in rates of mass, carbon, and nitrogen accumulation during the last century. Rates of C and N accumulation were highly variable at all spatial scales studied. For example, after {approximately}125 yr of peat growth, C and N accumulation varied by factors of five and four, respectively, from 25 to 125 g/dm{sup 2} for C, and from 0.7 to 2.6 g/dm{sup 2} for N. It takes 40 yr of peat accumulation before significant amounts of C are lost through decay. Hummocks built up by Sphagnum fuscum and S. rubellum were able to maintain average rates of C accumulation that exceed 2 g{center_dot}dm{sup {minus}2}{center_dot} yr{sup {minus}1} during 50 yr of growth. The authors argue that data on spatial variation in rates of C accumulation are necessary to understand the role of boreal peatlands in the greenhouse effect and global climate.

  8. Baicalein inhibits lipid accumulation by regulating early adipogenesis and m-TOR signaling.

    PubMed

    Seo, Min-Jung; Choi, Hyeon-Son; Jeon, Hui-Jeon; Woo, Mi-Seon; Lee, Boo-Yong

    2014-05-01

    Baicalein is a type of flavonoid that originates from Scutellaria baicalensis. In this study, we examined how baicalein inhibits lipid accumulation during adipogenesis in 3T3-L1 cells. Our data show that baicalein inhibited lipid accumulation during adipogenesis in a dose-dependent manner. Baicalein inhibition was limited to the early adipogenic stage. Cell cycle analysis showed that baicalein induced cell cycle arrest in the G0/G1 phase through cyclin downregulation. In addition, baicalein suppressed the mRNA expression of early adipogenic factors leading to downregulation of late adipogenic factors at mRNA and protein levels. Inhibition of adipogenic factors by baicalein was correlated with downregulation of lipid synthetic enzymes. Additionally, baicalein negatively regulated the m-TOR signaling pathway involved in lipid accumulation during adipogenesis, thus inhibiting phosphorylation of m-TOR and p70S6K. In a zebrafish study, baicalein significantly reduced lipid accumulation in Nile Red staining. Consistent with a report using cell lines, mRNA expression of adipogenic factors was decreased in a dose-dependent manner by baicalein. This result reflects a reduction in total triglyceride levels based on a triglyceride assay. Our data suggest that baicalein inhibits lipid accumulation by controlling the cell cycle and m-TOR signaling in 3T3-L1 cells, and its anti-adipogenic effect was found in a zebrafish model.

  9. Determinism of carbon and nitrogen reserve accumulation in legume seeds.

    PubMed

    Munier-Jolain, Nathalie; Larmure, Annabelle; Salon, Christophe

    2008-10-01

    In legume plants, the determination of individual seed weight is a complex phenomenon that depends on two main factors. The first one corresponds to the number of cotyledon cells, which determines the potential seed weight as the cotyledon cell number is related to seed growth rate during seed filling. Since cell divisions take place between flowering and the beginning of seed filling, any stress occurring before the beginning of seed filling can affect individual seed growth rate (C and N reserve accumulation in seeds), and thus individual seed weights. The second factor concerns carbon and nitrogen supply to the growing seed to support reserve accumulation. Grain legume species produce protein-rich seeds involving high requirement of nitrogen. Since seed growth rate as determined by cotyledon cell number is hardly affected by photoassimilate availability during the filling period, a reduction of photosynthetic activity caused by nitrogen remobilization in leaves (e.g., remobilization of essential proteins involved in photosynthesis) can lead to shorten the duration of the filling period, and by that can provoke a limitation of individual seed weights. Accordingly, any biotic or abiotic stress during seed filling causing a decrease in photosynthetic activity should lead to a reduction of the duration of seed filling.

  10. Lipid Accumulation in Hypoxic Tissue Culture Cells

    PubMed Central

    Gordon, Gerald B.; Barcza, Maureen A.; Bush, Marilyn E.

    1977-01-01

    Lipid droplets have long been recognized by light microscopy to accumulate in hypoxic cells both in vivo and in vitro. In the present tissue culture experiments, correlative electron microscopic observations and lipid analyses were performed to determine the nature and significance of lipid accumulation in hypoxia. Strain L mouse fibroblasts were grown in suspension culture, both aerobically and under severe oxygen restriction obtained by gassing cultures daily with an 8% CO2-92% nitrogen mixture. After 48 hours, hypoxic cells showed an increase in total lipid/protein ratio of 42% over control cells. Most of this increase was accounted for by an elevation in the level of cellular triglyceride from 12.3 ± 0.9 μg/mg cell protein in aerobic cultures to 41.9 ± 0.7 in the hypoxic cultures, an increase of 240%. Levels of cellular free fatty acids (FFA) were 96% higher in the hypoxic cultures. No significant changes in the levels of cellular phospholipid or cholesterol were noted. Electron microscopic examination revealed the accumulation of homogeneous cytoplasmic droplets. The hypoxic changes were reversible upon transferring the cultures to aerobic atmospheres with disappearance of the lipid. These experiments indicate that hypoxic injury initially results in triglyceride and FFA accumulation from an inability to oxidize fatty acids taken up from the media and not from autophagic processes, as described in other types of cell injury associated with the sequestration of membranous residues and intracellular cholesterol and phospholipid accumulation. ImagesFigure 3Figure 4Figure 5Figure 6Figure 7Figure 1Figure 2 PMID:196505

  11. Tear film MMP accumulation and corneal disease

    PubMed Central

    Smith, V; Rishmawi, H; Hussein, H; Easty, D

    2001-01-01

    BACKGROUND/AIMS—Matrix metalloproteinases (MMPs) accumulate in the tears of patients with active peripheral ulcerative keratitis (PUK) but it is unknown whether these enzymes have a central role in disease progression. The aims of the present investigation were to determine the source of these enzymes and to ascertain whether their accumulation in tears is a phenomenon specific to PUK or a general feature of other anterior segment diseases.
METHODS—The experimental samples were obtained from the culture media of conjunctival and corneal epithelial cells, from fractionated blood plasma and leucocytes of healthy subjects and patients with rheumatoid arthritis, and from the tears of healthy subjects and patients with a variety of anterior segment diseases. The MMPs of all samples were visualised by zymography and tear samples were assayed using nitrophenol acetate and an MMP-9 susceptible quenched fluorescent peptide as substrate.
RESULTS—The major MMPs that accumulate in the tears of patients with rheumatoid arthritis with active ocular disease are MMP-9 and a species of Mr 116 000. By comparing the zymographic activity profiles of the gelatinases present in the samples obtained, it was deduced that the main source of these MMPs was granulocytes. Their accumulation in tears was not unique to patients with PUK; detectable amounts of the enzymes also occurred in the tears of patients with keratoconus with associated atopic disease, patients undergoing treatment for herpetic eye disease, and patients with systemic and non-systemic dry eye disease.
CONCLUSION—The MMPs that accumulate in tears are mainly derived from granulocytes. This may be effected by autoimmune diseases that involve ocular tissue or by ocular diseases that induce an inflammatory response.

 PMID:11159476

  12. Accumulation of polycyclic aromatic hydrocarbons from creosote-contaminated soil in selected plants and the oligochaete worm Enchytraeus crypticus

    SciTech Connect

    Ann-Sofie Allard; Marianne Malmberg; Alasdair H. Neilson; Mikael Remberger

    2005-07-01

    The accumulation of PAHs from a creosote-contaminated soil was examined in laboratory experiments using English ryegrass (Lolium perenne), white clover (Trifolium repens) and radish (Raphanus sativus), and the oligochaete worm Enchytraeus crypticus. Toxicity to the plants and the worms was assessed, and a soil sample mixed with calcined sand was used for accumulation experiments to avoid interference from toxicity in the soil. Accumulation of potentially carcinogenic PAHs varied among the plants, and there was a linear relation between concentrations of PAHs in the soil and in the plants. Correlations between values of the biota-soil accumulation factors and octanol-water partition coefficients, or water solubility varied among the plants and were rather weak, so that lipophilic character or water solubility of the PAHs alone cannot explain PAH accumulation. Accumulation of carcinogenic PAHs from the soil, in the presence of the other PAHs was greatest for Trifolium repens. PAHs were accumulated in the oligochaete worm (Enchytraeus crypticus), and biota-soil accumulation factors exceeded those for the plants. It is suggested that site-specific evaluation of contaminated sites should include not only chemical analysis and evaluation of toxicity but also accumulation of contaminants into biota such as plants and worms.

  13. Copper and cobalt accumulation in plants: a critical assessment of the current state of knowledge.

    PubMed

    Lange, Bastien; van der Ent, Antony; Baker, Alan John Martin; Echevarria, Guillaume; Mahy, Grégory; Malaisse, François; Meerts, Pierre; Pourret, Olivier; Verbruggen, Nathalie; Faucon, Michel-Pierre

    2017-01-01

    This review synthesizes contemporary understanding of copper-cobalt (Cu-Co) tolerance and accumulation in plants. Accumulation of foliar Cu and Co to > 300 μg g(-1) is exceptionally rare globally, and known principally from the Copperbelt of Central Africa. Cobalt accumulation is also observed in a limited number of nickel (Ni) hyperaccumulator plants occurring on ultramafic soils around the world. None of the putative Cu or Co hyperaccumulator plants appears to comply with the fundamental principle of hyperaccumulation, as foliar Cu-Co accumulation is strongly dose-dependent. Abnormally high plant tissue Cu concentrations occur only when plants are exposed to high soil Cu with a low root to shoot translocation factor. Most Cu-tolerant plants are Excluders sensu Baker and therefore setting nominal threshold values for Cu hyperaccumulation is not informative. Abnormal accumulation of Co occurs under similar circumstances in the Copperbelt of Central Africa as well as sporadically in Ni hyperaccumulator plants on ultramafic soils; however, Co-tolerant plants behave physiologically as Indicators sensu Baker. Practical application of Cu-Co accumulator plants in phytomining is limited due to their dose-dependent accumulation characteristics, although for Co field trials may be warranted on highly Co-contaminated mineral wastes because of its relatively high metal value.

  14. Size and accumulation of fuel reserves at stopover predict nocturnal restlessness in a migratory bird.

    PubMed

    Eikenaar, Cas; Schläfke, Jan Laszlo

    2013-01-01

    Early arrival at the breeding site positively affects the breeding success of migratory birds. During migration, birds spend most of their time at stopovers. Therefore, determining which factors shape stopover duration is essential to our understanding of avian migration. Because the main purpose of stopover is to accumulate fat as fuel for the next flight bout, fuel reserves at arrival and the accumulation of fuel are both expected to affect stopover departure decisions. Here, we determined whether fuel reserves and fuel accumulation predict a bird's motivation to depart, as quantified by nocturnal migratory restlessness (Zugunruhe), using northern wheatears (Oenanthe oenanthe) that were captured and temporarily contained at spring stopover. We found that fuel reserves at capture were positively correlated with Zugunruhe, and negatively correlated with fuel accumulation. This indicates that fat birds were motivated to depart, whereas lean birds were set on staying and accumulating fuel. Moreover, the change in fuel reserves was positively correlated with the concurrent change in Zugunruhe, providing the first empirical evidence for a direct link between fuel accumulation and Zugunruhe during stopover. Our study indicates that, together with innate rhythms and weather, the size and accumulation of fuel reserves shape stopover duration, and hence overall migration time.

  15. Lead Tolerance and Accumulation in Hirschfeldia incana, a Mediterranean Brassicaceae from Metalliferous Mine Spoils

    PubMed Central

    Auguy, Florence; Fahr, Mouna; Moulin, Patricia; Brugel, Anaïs; Laplaze, Laurent; Mzibri, Mohamed El; Filali-Maltouf, Abdelkarim; Doumas, Patrick; Smouni, Abdelaziz

    2013-01-01

    Lead is a heavy metal of particular concern with respect to environmental quality and health. The lack of plant species that accumulate and tolerate Pb is a limiting factor to understand the molecular mechanisms involved in Pb tolerance. In this study we identified Hirschfeldia incana, a Brassicaceae collected from metalliferous mine spoils in Morocco, as a Pb accumulator plant. H. incana exhibited high Pb accumulation in mine soils and in hydroponic cultures. Major Pb accumulation occurred in the roots and a part of Pb translocated from the roots to the shoots, even to the siliques. These findings demonstrated that H. incana is a Pb accumulator species. The expression of several candidate genes after Pb-exposure was measured by quantitative PCR and two of them, HiHMA4 and HiMT2a, coding respectively for a P1B-type ATPase and a metallothionein, were particularly induced by Pb-exposure in both roots and leaves. The functional characterization of HiHMA4 and HiMT2a was achieved using Arabidopsis T-DNA insertional mutants. Pb content and primary root growth analysis confirmed the role of these two genes in Pb tolerance and accumulation. H. incana could be considered as a good experimental model to identify genes involved in lead tolerance and accumulation in plants. PMID:23667449

  16. Uncertainty analysis for an equilibrium partitioning-based estimator of polynuclear aromatic hydrocarbon bioaccumulation potential in sediments

    SciTech Connect

    Clarke, J.U.; McFarland, V.A.

    2000-02-01

    In regulatory evaluations of contaminated sediments, an equilibrium partitioning-based screening test called theoretical bioaccumulation potential (TBP) is often performed to estimate the probable concentrations of neutral organic contaminants that would eventually accumulate in aquatic organisms from continuous exposure to a sediment. The TBP is calculated from contaminant concentration and organic carbon content of the sediment, lipid content of target organisms, and a partition coefficient, usually the biota-sediment accumulation factor (BSAF). However, routine applications of TBP have not included analysis of uncertainty. This paper demonstrates two methods for uncertainty analysis of TBP: a computational method that incorporates random and systematic error and a simulation method using bootstrap resampling of replicated model input parameters to calculate statistical uncertainty measures. For prediction of polynuclear aromatic hydrocarbon (PAH) bioaccumulation in bivalves exposed to contaminated sediments, uncertainty as a factor of TBP ranged from 1.2 to 4.8 using the computational method and 0.5 to 1.9 based on bootstrap 95% confidence intervals. Sensitivity analysis indicated that BSAF parameters, especially tissue contaminant concentration and lipid content, contributed most to TBP uncertainty. In bootstrap tests of significance, TBP significantly over- or underestimated actual PAH bioaccumulation in bivalves in 41% and 10% of comparisons, respectively.

  17. Bioaccumulation of polycyclic aromatic hydrocarbons (PAHs) in a Dutch riverine floodplain: Comparison of laboratory and field studies

    SciTech Connect

    Ma, W.; Kleunen, A. van; Immerzeel, J.

    1995-12-31

    Riverine floodplains are areas influenced by inundation dynamics. Due to the periodic deposition of contaminated sediment, these areas are polluted with metals and organic pollutant chemicals such as polycyclic aromatic hydrocarbons (PAHs). The in-situ bioaccumulation potential of PAHs was investigated using earthworms as bioavailability indicators. The results were compared with those of laboratory experiments. PAH compounds occurred in soil in the field predominantly in association with organic matter rather than with any particular grain size fraction. Lipid-normalized concentrations of individual PAHs in the earthworm tissues showed an isometric relationship with the organic-matter normalized concentration in soil, with hence the biota-soil accumulation factor (BSAF) being independent of log Kow. The field-generated BSAF corresponded closely with the laboratory-determined value for earthworms exposed to spiked soil. The value was lower than expected from equilibrium partitioning theory, possibly due to biotransformation of accumulated PAHs as confirmed by laboratory studies in a free water environment. Field values of the bioconcentration factor (BCF), calculated for each individual PAH in the soil pore water phase, were in the same order of magnitude as the results of laboratory kinetic experiments in water. The combined data support the possibility of extrapolation of laboratory-derived data to PAH bioaccumulation in field risk assessments.

  18. Distribution of polycyclic aromatic hydrocarbons in soils and terrestrial biota after a spill of crude oil in Trecate, Italy.

    PubMed

    Brandt, Charles A; Becker, James M; Porta, Augusto

    2002-08-01

    Ecological and human health exposures from soil-based petroleum-derived contaminants commonly are estimated by using soil-to-biota transfer factors that usually are based on octanol-water partitioning. Few studies of biota have been conducted in relation to spills of crude oils in terrestrial environments. After a large blowout of crude oil in northern Italy in 1994, the distribution of polycyclic aromatic hydrocarbons (PAHs) was examined over time and space in soils, uncultivated wild vegetation, insects, mice, and frogs in the area. Within two years of the blowout, PAH concentrations declined to background levels over much of the area where initial concentrations were within an order of magnitude above background, but had not declined to background in areas where starting concentrations exceeded background by two orders of magnitude. Octanol-water partitioning and extent of alkylation explained much of the variance in uptake of PAHs by plants and animals. The PAHs with lower octanol-water partition coefficients (K(ow)s) and higher-alkylated PAHs had higher biota-soil accumulation factors (BSAFs) than did high-K(ow) and unalkylated forms. The BSAFs for PAHs with higher K(ow)s were very low for plants, but much higher for animals, with frogs accumulating more of these compounds than other species.

  19. Routes of uptake of diclofenac, fluoxetine, and triclosan into sediment-dwelling worms.

    PubMed

    Karlsson, Maja V; Marshall, Stuart; Gouin, Todd; Boxall, Alistair B A

    2016-04-01

    The present study investigated the route and degree of uptake of 2 ionizable pharmaceuticals (diclofenac and fluoxetine) and 1 ionizable compound used in personal care products (triclosan) into the sediment-dwelling worm Lumbriculus variegatus. Studies were done on complete worms ("feeding") and worms where the head was absent ("nonfeeding") using (14) C-labeled ingredients. Biota sediment accumulation factors (BSAF), based on uptake of (14) C, for feeding worms increased in the order fluoxetine (0.3) < diclofenac (0.5) < triclosan (9), which is correlated with a corresponding increase in log octanol-water partition coefficient. Biota sediment accumulation factor estimates are representative of maximum values because the degree of biotransformation in the worms was not quantified. Although no significant differences were seen between the uptake of diclofenac and that of fluoxetine in feeding and nonfeeding worms, uptake of the more hydrophobic antimicrobial, triclosan, into the feeding worms was significantly greater than that in the nonfeeding worms, with the 48-h BSAF for feeding worms being 36% higher than that for the nonfeeding worms. The results imply that dietary uptake contributes to the uptake of triclosan, which may be a result of the high hydrophobicity of the compound. Models that estimate exposure of ionizable substances may need to consider uptake from both the water column and food, particularly when assessing risks from dynamic exposures to organic contaminants.

  20. Congener specificity in the accumulation of dioxins and dioxin-like compounds in zucchini plants grown hydroponically.

    PubMed

    Inui, Hideyuki; Wakai, Taketo; Gion, Keiko; Yamazaki, Kiyoshi; Kim, Yun-Seok; Eun, Heesoo

    2011-01-01

    Zucchini cultivars Cucurbita pepo subsp. ovifera cv. Patty Green and subsp. pepo cv. Gold Rush were cultivated hydroponically in a nutrient solution supplemented with a mixture of dioxins and dioxin-like compounds. Patty Green and Gold Rush showed low and high accumulation of these compounds in the aerial parts respectively. In both cultivars, the accumulation of each congener negatively depended on its hydrophobicity. This suggests that desorption and solubilization were partly responsible for congener specificity of accumulation, since this was not found in soil experiments. In contrast, no clear difference in accumulation in the roots was observed between the cultivars, whereas the translocation factors, which are indicators of efficient translocation from the roots to the aerial parts, differed among the congeners hydrophobicity-dependently. There were positive correlations between accumulation in the roots and the hydrophobicity of the polychlorinated biphenyl congeners in both cultivars. These results indicate that translocation was also partly responsible for the congener specificity and accumulation concentrations.

  1. 26 CFR 1.535-3 - Accumulated earnings credit.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 26 Internal Revenue 7 2013-04-01 2013-04-01 false Accumulated earnings credit. 1.535-3 Section 1... Accumulated earnings credit. (a) In general. As provided in section 535(a) and § 1.535-1, the accumulated earnings credit, provided by section 535(c), reduces taxable income in computing accumulated taxable...

  2. 26 CFR 1.535-3 - Accumulated earnings credit.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 26 Internal Revenue 7 2010-04-01 2010-04-01 true Accumulated earnings credit. 1.535-3 Section 1... Accumulated earnings credit. (a) In general. As provided in section 535(a) and § 1.535-1, the accumulated earnings credit, provided by section 535(c), reduces taxable income in computing accumulated taxable...

  3. 26 CFR 1.535-3 - Accumulated earnings credit.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 26 Internal Revenue 7 2012-04-01 2012-04-01 false Accumulated earnings credit. 1.535-3 Section 1... Accumulated earnings credit. (a) In general. As provided in section 535(a) and § 1.535-1, the accumulated earnings credit, provided by section 535(c), reduces taxable income in computing accumulated taxable...

  4. 26 CFR 1.535-3 - Accumulated earnings credit.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 26 Internal Revenue 7 2011-04-01 2009-04-01 true Accumulated earnings credit. 1.535-3 Section 1... Accumulated earnings credit. (a) In general. As provided in section 535(a) and § 1.535-1, the accumulated earnings credit, provided by section 535(c), reduces taxable income in computing accumulated taxable...

  5. Clinical issues of mucus accumulation in COPD

    PubMed Central

    Ramos, Frederick L; Krahnke, Jason S; Kim, Victor

    2014-01-01

    Airway mucus is part of the lung’s native immune function that traps particulates and microorganisms, enabling their clearance from the lung by ciliary transport and cough. Mucus hypersecretion and chronic productive cough are the features of the chronic bronchitis and chronic obstructive pulmonary disease (COPD). Overproduction and hypersecretion by goblet cells and the decreased elimination of mucus are the primary mechanisms responsible for excessive mucus in chronic bronchitis. Mucus accumulation in COPD patients affects several important outcomes such as lung function, health-related quality of life, COPD exacerbations, hospitalizations, and mortality. Nonpharmacologic options for the treatment of mucus accumulation in COPD are smoking cessation and physical measures used to promote mucus clearance. Pharmacologic therapies include expectorants, mucolytics, methylxanthines, beta-adrenergic receptor agonists, anticholinergics, glucocorticoids, phosphodiesterase-4 inhibitors, antioxidants, and antibiotics. PMID:24493923

  6. Plaque accumulations caused by interdental stripping.

    PubMed

    Radlanski, R J; Jäger, A; Schwestka, R; Bertzbach, F

    1988-11-01

    Human enamel surfaces were stripped with orthodontic grinding and finishing materials, and evaluated with the scanning electron microscope (SEM). Even under in vitro conditions with the finest finishing strips, it was not possible to produce an enamel surface free of the furrows that result from the initial abrasion caused by the coarse strip. Enamel surfaces stripped gradually from coarse to superfine were left in the mouths of patients for 12 weeks and evaluated with the SEM. The edges of the furrows were found to be smoother but the furrows remained wide and deep enough to facilitate more plaque accumulations than those on untreated surfaces. The use of dental floss did not result in prevention of plaque accumulations along the bottom of the furrows.

  7. Heat accumulation during pulsed laser materials processing.

    PubMed

    Weber, Rudolf; Graf, Thomas; Berger, Peter; Onuseit, Volkher; Wiedenmann, Margit; Freitag, Christian; Feuer, Anne

    2014-05-05

    Laser materials processing with ultra-short pulses allows very precise and high quality results with a minimum extent of the thermally affected zone. However, with increasing average laser power and repetition rates the so-called heat accumulation effect becomes a considerable issue. The following discussion presents a comprehensive analytical treatment of multi-pulse processing and reveals the basic mechanisms of heat accumulation and its consequence for the resulting processing quality. The theoretical findings can explain the experimental results achieved when drilling microholes in CrNi-steel and for cutting of CFRP. As a consequence of the presented considerations, an estimate for the maximum applicable average power for ultra-shorts pulsed laser materials processing for a given pulse repetition rate is derived.

  8. Solar-Panel Dust Accumulation and Cleanings

    NASA Technical Reports Server (NTRS)

    2005-01-01

    Air-fall dust accumulates on the solar panels of NASA's Mars Exploration Rovers, reducing the amount of sunlight reaching the solar arrays. Pre-launch models predicted steady dust accumulation. However, the rovers have been blessed with occasional wind events that clear significant amounts of dust from the solar panels.

    This graph shows the effects of those panel-cleaning events on the amount of electricity generated by Spirit's solar panels. The horizontal scale is the number of Martian days (sols) after Spirit's Jan. 4, 2005, (Universal Time) landing on Mars. The vertical scale indicates output from the rover's solar panels as a fraction of the amount produced when the clean panels first opened. Note that the gradual declines are interrupted by occasional sharp increases, such as a dust-cleaning event on sol 420.

  9. Work Involvement and Timing of Motherhood in the Accumulation of Problems in Social Functioning in Young Women.

    ERIC Educational Resources Information Center

    Ronka, Anna; Pulkkinen, Lea

    1998-01-01

    Examined longitudinally the relationship between earlier risk factors and later problems in young Finnish women's social functioning. Found that low work involvement mediated between risk factors and accumulation of problems in social functioning in young adulthood. Risk factors increased the likelihood of early motherhood, but early motherhood…

  10. Conostegia xalapensis (Melastomataceae): an aluminum accumulator plant.

    PubMed

    González-Santana, Iris Hayde; Márquez-Guzmán, Judith; Cram-Heydrich, Silke; Cruz-Ortega, Rocio

    2012-02-01

    In acidic soils, an excess of Al³⁺ is toxic to most plants. The Melastomataceae family includes Al-accumulator genera that tolerate high Al³⁺ by accumulating it in their tissues. Conostegia xalapensis is a common shrub in Mexico and Central America colonizing mainly disturbed areas. Here, we determined whether C. xalapensis is an Al accumulator, and whether it has internal tolerance mechanisms to Al. Soil samples collected from two pastures in the state of Veracruz, Mexico, had low pH and high Al³⁺ concentrations along with low Ca²⁺ levels. Leaves of C. xalapensis from pastures showed up to 19,000 mg Al kg⁻¹ DW (dry weight). In laboratory experiments, 8-month-old seedlings treated with 0.5 and 1.0 mM AlCl₃ for 24 days showed higher number of lateral roots and biomass. Pyrocatechol violet and hematoxylin staining evidenced that Al localized in epidermis and mesophyll cells in leaves and in epidermis and vascular pith in roots. Scanning electron microscope-energy dispersive X-ray microanalysis of Al-treated leaves corroborated that Al is in abaxial and adaxial epidermis and in mesophyll cells (31.2%) in 1.0 mM Al-treatment. Roots of Al-treated plants had glutathione reductase (EC 1.6.4.2) and superoxide dismutase (EC 1.15.1.1) activity higher, and low levels of O₂*⁻ and H₂O₂. C. xalapensis is an Al-accumulator plant that can grow in acidic soils with higher Al³⁺ concentrations, and can be considered as an indicator species for soils with potential Al toxicity.

  11. Multiple anatomy optimization of accumulated dose

    SciTech Connect

    Watkins, W. Tyler Siebers, Jeffrey V.; Moore, Joseph A.; Gordon, James; Hugo, Geoffrey D.

    2014-11-01

    Purpose: To investigate the potential advantages of multiple anatomy optimization (MAO) for lung cancer radiation therapy compared to the internal target volume (ITV) approach. Methods: MAO aims to optimize a single fluence to be delivered under free-breathing conditions such that the accumulated dose meets the plan objectives, where accumulated dose is defined as the sum of deformably mapped doses computed on each phase of a single four dimensional computed tomography (4DCT) dataset. Phantom and patient simulation studies were carried out to investigate potential advantages of MAO compared to ITV planning. Through simulated delivery of the ITV- and MAO-plans, target dose variations were also investigated. Results: By optimizing the accumulated dose, MAO shows the potential to ensure dose to the moving target meets plan objectives while simultaneously reducing dose to organs at risk (OARs) compared with ITV planning. While consistently superior to the ITV approach, MAO resulted in equivalent OAR dosimetry at planning objective dose levels to within 2% volume in 14/30 plans and to within 3% volume in 19/30 plans for each lung V20, esophagus V25, and heart V30. Despite large variations in per-fraction respiratory phase weights in simulated deliveries at high dose rates (e.g., treating 4/10 phases during single fraction beams) the cumulative clinical target volume (CTV) dose after 30 fractions and per-fraction dose were constant independent of planning technique. In one case considered, however, per-phase CTV dose varied from 74% to 117% of prescription implying the level of ITV-dose heterogeneity may not be appropriate with conventional, free-breathing delivery. Conclusions: MAO incorporates 4DCT information in an optimized dose distribution and can achieve a superior plan in terms of accumulated dose to the moving target and OAR sparing compared to ITV-plans. An appropriate level of dose heterogeneity in MAO plans must be further investigated.

  12. Accumulation and subsequent utilization of waste heat

    NASA Astrophysics Data System (ADS)

    Koloničný, Jan; Richter, Aleš; Pavloková, Petra

    2016-06-01

    This article aims to introduce a special way of heat accumulation and primary operating characteristics. It is the unique way in which the waste heat from flue gas of biogas cogeneration station is stored in the system of storage tanks, into the heat transfer oil. Heat is subsequently transformed into water, from which is generated the low-pressure steam. Steam, at the time of peak electricity needs, spins the special designed turbine generator and produces electrical energy.

  13. Accumulation of perfluoroalkyl substances in human tissues.

    PubMed

    Pérez, Francisca; Nadal, Martí; Navarro-Ortega, Alícia; Fàbrega, Francesc; Domingo, José L; Barceló, Damià; Farré, Marinella

    2013-09-01

    Perfluoroalkyl substances (PFASs) are environmental pollutants with an important bioaccumulation potential. However, their metabolism and distribution in humans are not well studied. In this study, the concentrations of 21 PFASs were analyzed in 99 samples of autopsy tissues (brain, liver, lung, bone, and kidney) from subjects who had been living in Tarragona (Catalonia, Spain). The samples were analyzed by solvent extraction and online purification by turbulent flow and liquid chromatography coupled to tandem mass spectrometry. The occurrence of PFASs was confirmed in all human tissues. Although PFASs accumulation followed particular trends depending on the specific tissue, some similarities were found. In kidney and lung, perfluorobutanoic acid was the most frequent compound, and at highest concentrations (median values: 263 and 807ng/g in kidney and lung, respectively). In liver and brain, perfluorohexanoic acid showed the maximum levels (median: 68.3 and 141ng/g, respectively), while perfluorooctanoic acid was the most contributively in bone (median: 20.9ng/g). Lung tissues accumulated the highest concentration of PFASs. However, perfluorooctane sulfonic acid and perfluorooctanoic acid were more prevalent in liver and bone, respectively. To the best of our knowledge, the accumulation of different PFASs in samples of various human tissues from the same subjects is here reported for the very first time. The current results may be of high importance for the validation of physiologically based pharmacokinetic models, which are being developed for humans. However, further studies on the distribution of the same compounds in the human body are still required.

  14. Premature chromatin condensation upon accumulation of NIMA.

    PubMed Central

    O'Connell, M J; Norbury, C; Nurse, P

    1994-01-01

    The NIMA protein kinase of Aspergillus nidulans is required for the G2/M transition of the cell cycle. Mutants lacking NIMA arrest without morphological characteristics of mitosis, but they do contain an activated p37nimX kinase (the Aspergillus homologue of p34cdc2). To gain a better understanding of NIMA function we have investigated the effects of expressing various NIMA constructs in Aspergillus, fission yeast and human cells. Our experiments have shown that the instability of the NIMA protein requires sequences in the non-catalytic C-terminus of the protein. Removal of this domain results in a stable protein that, once accumulated, promotes a lethal premature condensation of chromatin without any other aspects of mitosis. Similar effects were also observed in fission yeast and human cells accumulating Aspergillus NIMA. This phenotype is independent of cell cycle progression and does not require p34cdc2 kinase activity. As gain of NIMA function by accumulation results in premature chromatin condensation, and loss of NIMA function results in an inability to enter mitosis, we propose that NIMA functions in G2 to promote the condensation of chromatin normally associated with entry into mitosis. Images PMID:7957060

  15. Mercury accumulation of three Lactarius mushroom species.

    PubMed

    Falandysz, Jerzy

    2017-01-01

    Accumulation, distribution and potential dietary intake of mercury accumulated by mushrooms of Lactarius species L. delicious, L. volemus and L. deterrimus were studied in the Pomerania region of Poland. In total, 212 fruiting bodies and 106 underlying topsoil samples were analyzed. Analysis indicated that the concentrations of Hg were at low levels both in mushrooms and forest topsoils for a majority of the locations investigated. L. volemus that grew in soils with only a slightly elevated contamination (0.11±0.07mgkg(-1) of dried soil), very efficiently accumulated Hg in fruiting bodies and concentration levels were at 3.7±1.3mgkg(-1) of dry biomass in caps and at 1.9±0.9mgkg(-1) of dry biomass in stipes. Consumption of mushrooms foraged from the Sobowidz forest, which is close to a foundry using ferrous and non-ferrous metals could result in a Hg intake that exceeds the current statutory limits.

  16. Anthocyanins facilitate tungsten accumulation in Brassica

    SciTech Connect

    Hale, K.L.

    2002-11-01

    Accumulation of molybdenum in Brassica was recently found to be correlated with anthocyanin content, involving the formation of a blue complex. Here the role of anthocyanins in tungsten sequestration was investigated using three species of Brassica: B. rapa (cv. Fast plants), B. juncea (Indian mustard) and B. oleracea (red cabbage). Seedlings of B. rapa and B. juncea turned blue when supplied with colourless tungstate. The blue compound co-localized with anthocyanins in the peripheral cell layers, and the degree of blueness was correlated with anthocyanin content. The direct involvement of anthocyanins in the blue coloration was evident when purified anthocyanins showed a colour change from pink to blue in vitro upon addition of tungstate, over a wide pH range. Anthocyanin production was upregulated 3-fold by W in B. juncea, possibly reflecting a function for anthocyanins in W tolerance or sequestration. The presence of anthocyanins facilitated W accumulation in B. rapa: anthocyanin-containing seedlings accumulated 3-fold more W than an anthocyaninless mutant. There was no correlation between anthocyanin content and W tolerance under these conditions. The nature of the interaction between anthocyanins and tungstate was investigated. X-ray absorption spectroscopy showed no change in the local chemical environment of Wupon uptake of tungstate by the plant; HPLC analysis of purified anthocyanin with or without tungstate showed no peak shift after metal treatment.

  17. Sodium Influx and Accumulation in Arabidopsis1

    PubMed Central

    Essah, Pauline A.; Davenport, Romola; Tester, Mark

    2003-01-01

    Arabidopsis is frequently used as a genetic model in plant salt tolerance studies, however, its physiological responses to salinity remain poorly characterized. This study presents a characterization of initial Na+ entry and the effects of Ca2+ on plant growth and net Na+ accumulation in saline conditions. Unidirectional Na+ influx was measured carefully using very short influx times in roots of 12-d-old seedlings. Influx showed three components with distinct sensitivities to Ca2+, diethylpyrocarbonate, and osmotic pretreatment. Pharmacological agents and known mutants were used to test the contribution of different transport pathways to Na+ uptake. Influx was stimulated by 4-aminobutyric acid and glutamic acid; was inhibited by flufenamate, quinine, and cGMP; and was insensitive to modulators of K+ and Ca2+ channels. Influx did not differ from wild type in akt1 and hkt1 insertional mutants. These data suggested that influx was mediated by several different types of nonselective cation channels. Na+ accumulation in plants grown in 50 mm NaCl was strongly reduced by increasing Ca2+ activity (from 0.05-3.0 mm), and plant survival was improved. However, plant biomass was not affected by shoot Na+ concentration, suggesting that in Arabidopsis Na+ toxicity is not dependent on shoot Na+ accumulation. These data suggest that Arabidopsis is a good model for investigation of Na+ transport, but may be of limited utility as a model for the study of Na+ toxicity. PMID:12970496

  18. Competing mechanisms for perfluoroalkyl acid accumulation in plants revealed using an Arabidopsis model system.

    PubMed

    Müller, Claudia E; LeFevre, Gregory H; Timofte, Anca E; Hussain, Fatima A; Sattely, Elizabeth S; Luthy, Richard G

    2016-05-01

    Perfluoroalkyl acids (PFAAs) bioaccumulate in plants, presenting a human exposure route if present in irrigation water. Curiously, accumulation of PFAAs in plant tissues is greatest for both the short-chain and long-chain PFAAs, generating a U-shaped relationship with chain length. In the present study, the authors decouple competing mechanisms of PFAA accumulation using a hydroponic model plant system (Arabidopsis thaliana) exposed to a suite of 10 PFAAs to determine uptake, depuration, and translocation kinetics. Rapid saturation of root concentrations occurred for all PFAAs except perfluorobutanoate, the least-sorptive (shortest-chain) PFAA. Shoot concentrations increased continuously, indicating that PFAAs are efficiently transported and accumulate in shoots. Tissue concentrations of PFAAs during depuration rapidly declined in roots but remained constant in shoots, demonstrating irreversibility of the translocation process. Root and shoot concentration factors followed the U-shaped trend with perfluoroalkyl chain length; however, when normalized to dead-tissue sorption, this relationship linearized. The authors therefore introduce a novel term, the "sorption normalized concentration factor," to describe PFAA accumulation in plants; because of their hydrophobicity, sorption is the determining factor for long-chain PFAAs, whereas the shortest-chain PFAAs are most effectively transported in the plant. The present study provides a mechanistic explanation for previously unexplained PFAA accumulation trends in plants and suggests that shorter-chained PFAAs may bioaccumulate more readily in edible portions.

  19. Screening for new accumulator plants in Andes Range mines

    NASA Astrophysics Data System (ADS)

    Bech, Jaume; Roca, Núria

    2016-04-01

    Toxic metal pollution of waters and soils is a major environmental problem, and most conventional remediation approaches do not provide acceptable solutions. The use of plants or plant products to restore or stabilize contaminated sites, collectively known as phytoremediation, takes advantage of the natural abilities of plants to take up, accumulate, store, or degrade organic and inorganic substances. Although not a new concept, phytoremediation is currently being re-examined as an environmentally friendly, cost-effective means of reducing metal contaminated soil. Plants growing on naturally metal-enriched soils are of particular interest in this regard, since they are genetically tolerant to high metal concentrations and have an excellent adaptation to this multi-stress environment. Processes include using plants that tolerate and accumulate metals at high levels (phytoextraction) and using plants that can grow under conditions that are toxic to other plants while preventing, for example, soil erosion (phytostabilization). Soil and plant samples were taken at polymetallic mines in Peru, Ecuador and Chile. It is suggested that Plantago orbignyana Steinheil is a Pb hyperaccumulator. Moreover, unusually elevated concentrations of Pb (over 1000 mg kg-1) and Translocation Factor (TF) greater than one were also detected in shoots of 6 different plants species (Ageratina sp., Achirodine alata, Cortaderia apalothica, Epilobium denticulatum, Taraxacum officinalis and Trifolium repens) of a Caroline mine in Perú. Among the grass species (Poaceae), the highest shoot As concentration were found in Paspalum sp. (>1000 μg g-1) and Eriochola ramose (460 μg g-1) from the Cu mine in Peru and in Holcus lanatus and Pennisetum clandestinum (>200 μg g-1) from the silver mine in Ecuador. The shoot accumulation of Zn was highest in Baccharis amdatensis (>1900 μg g-1) and in Rumex crispus (1300 μg g-1) from the Ag mine in Ecuador (Bech et al., 2002). Paspalum racemosum also

  20. Accumulation of NKT cells in Progressive Nonalcoholic Fatty Liver Disease

    PubMed Central

    Syn, Wing-Kin; Oo, Ye Htun; Pereira, Thiago A; Karaca, Gamze F; Jung, Youngmi; Omenetti, Alessia; Witek, Rafal P; Choi, Steve S; Guy, Cynthia D; Fearing, Caitlin M; Teaberry, Vanessa; Pereira, Fausto E L; Adams, David H; Diehl, Anna Mae

    2010-01-01

    Liver inflammation is greater in nonalcoholic steatohepatitis (NASH) than steatosis, suggesting that immune responses contribute to NAFLD progression. Livers normally contain many natural killer T (NKT) cells which produce factors that modulate inflammatory and fibrogenic responses. Such cells are relatively depleted in steatosis, but their status in more advanced NAFLD is uncertain. We hypothesized that NKT cells accumulate and promote fibrosis progression in NASH. We aimed to determine if livers become enriched with NKT cells during NASH-related fibrosis; identify responsible mechanisms; and assess if NKT cells stimulate fibrogenesis. NKT cells were analyzed in wild type mice and Ptc+/-mice with an overly-active Hedgehog (Hh) pathway, before and after feeding methionine choline deficient (MCD) diets to induce NASH-related fibrosis; effects of NKT cell-derived factors on hepatic stellate cells (HSC) were examined and fibrogenesis was evaluated in CD1d-deficient mice which lack NKT cells; NKT cells were quantified in human cirrhotic and non-diseased livers. During NASH-related fibrogenesis in wild-type mice, Hh pathway activation occurred, leading to induction of factors that promoted NKT cell recruitment, retention and viability, plus liver enrichment with NKT cells. Ptc+/- mice accumulated more NKT cells and developed worse liver fibrosis; CD1d-deficient mice which lack NKT cells were protected from fibrosis. NKT cell-conditioned medium stimulated HSC to become myofibroblastic. Liver explants were 2-fold enriched with NKT cells in patients with non-NASH cirrhosis, and 4-fold enriched in patients with NASH-cirrhosis. In conclusion, Hh pathway activation leads to hepatic enrichment with NKT cells that contribute to fibrosis progression in NASH. PMID:20512988

  1. Accumulation of radionuclides by plants as a monitor system.

    PubMed Central

    Koranda, J J; Robison, W L

    1978-01-01

    The accumulation of radionuclides by plants acting as a monitoring system in the environment may occur by two modes; foliar absorption by the leaves and shoot of the plant, or by root uptake from the soil. Data on plant accumulation of radionuclides may be obtained from studies of fission product radionuclides deposited as worldwide fallout, and from tracer studies of plant physiology. The epidermal features of plant foliage may exert an effect upon particle retention by leaves, and subsequent uptake of radionuclides from the surface. The transport of radionuclides across the cuticle and epidermis of plant leaves is determined in part by the anatomy of the leaf, and by physiological factors. The foliar uptake of fallout radionuclides, 99Sr, 131I, and 137Cs, is described with examples from the scientific literature. The environmental half-life of 131I, for example, is considerably shorter than its physical half-life because of physical and biological factors which may produce a half-life as short as 0.23/day. 99Sr and 137Cs are readily taken up by the leaf, but 137Cs undergoes more translocation into fruit and seeds than 99Sr which tends to remain in the plant part in which it was initially absorbed. Soil-root uptake is conditioned primarily by soil chemical and physical factors which may selectively retain a radionuclide, such as 137Cs. The presence of organic matter, inorganic colloids (clay), and competing elements will strongly affect the uptake of 99Sr and 137Cs by plants from the soil. The role of plants as monitors of radionuclides is twofold: as monitors of recent atmospheric releases of radionuclides; and as indicators of the long-term behavior of aged deposits of radionuclides in the soil. PMID:367767

  2. Glycerol accumulation in edema formation following diffuse traumatic brain injury.

    PubMed

    Ali, Ahmer; Konakondla, Sanjay; Zwagerman, Nathan T; Peng, Changya; Schafer, Steven; Ding, Jamie Y; Dornbos, David; Sikharam, Chaitanya; Geng, Xiaokun; Guthikonda, Murali; Kreipke, Christian W; Rafols, José A; Ding, Yuchuan

    2012-06-01

    Traumatic brain injury (TBI) induces brain edema via water and glycerol transport channels, called aquaporins (AQPs). The passage of glycerol across brain cellular compartments has been shown during edema. Using a modified impact/head acceleration rodent model of diffuse TBI, we assessed the role of hypoxia inducible factor (HIF)-1alpha in regulating AQP9 expression and glycerol accumulation during the edema formation. Adult (400-425 g) male Sprague-Dawley rats received a closed head injury with a weight drop (450 g, 2-m height) and were allowed to survive up to 48 hours. Some rat groups were administered 2-methoxyestradiol (2ME2, a HIF-1alpha inhibitor) 30 minutes after injury and were euthanized at 4 and 24 hours after injury. Brain edema was measured directly by water content, and glycerol concentration was determined by the Cayman Glycerol Assay. HIF-1alpha and AQP9 protein levels were assessed by Western immunoblotting. This study demonstrated a significant (P<0·05) increase in brain water content at 4-48 hours following impact. Cerebral glycerol was significantly (P<0.05) up-regulated at as early as 1 hour and remained at high levels for up to 48 hours. Similarly, significant (P<0.05) increases in HIF-1alpha and AQP9 protein levels were found at 1 hour and up to 48 hours after injury. Compared to untreated but injured rats, inhibition of HIF-1alpha by 2ME2 significantly (P<0.05) reduced the TBI-induced AQP9 up-regulation. This reduction was temporally associated with significant (P<0.05) decreases in both edema and glycerol accumulation. The data suggested an associated induction of HIF-1alpha, AQP9, and extracellular glycerol accumulation in edema formation following diffuse TBI. The implication of HIF-1alpha and AQP9 underlying TBI-induced edema formation offers possibilities for novel TBI therapies.

  3. Accumulation, elimination, and speciation of cadmium and zinc in mussels, Mytilus edulis, in the natural environment

    SciTech Connect

    Luten, J.B.; Bouquet, W.; Burggraaf, M.M.; Rus, J.

    1986-10-01

    Accumulation of trace metals like cadmium and zinc by the common mussel (Mytilus edulis) has been often studied. Most of these studies have been carried out under laboratory conditions. It has been shown that the accumulation of cadmium by the common mussel is affected by abiotic factors like salinity, temperature and the presence of complexing agents and biotic factors like animal size, sex and maturity. Elimination studies of cadmium from the common mussel are scarce. Detoxification of cadmium by the common mussel takes place by binding to low (metallothionein) and high molecular weight proteins. The objective of this study was to investigate accumulation and elimination of cadmium and zinc by the common mussel in the natural environment in combination with a study about the speciation of cadmium and zinc in the common mussel.

  4. Stillage reflux in food waste ethanol fermentation and its by-product accumulation.

    PubMed

    Ma, Hongzhi; Yang, Jian; Jia, Yan; Wang, Qunhui; Tashiro, Yukihiro; Sonomoto, Kenji

    2016-06-01

    Raw materials and pollution control are key issues for the ethanol fermentation industry. To address these concerns, food waste was selected as fermentation substrate, and stillage reflux was carried out in this study. Reflux was used seven times during fermentation. Corresponding ethanol and reducing sugar were detected. Accumulation of by-products, such as organic acid, sodium chloride, and glycerol, was investigated. Lactic acid was observed to accumulate up to 120g/L, and sodium chloride reached 0.14mol/L. Other by-products did not accumulate. The first five cycles of reflux increased ethanol concentration, which prolonged fermentation time. Further increases in reflux time negatively influenced ethanol fermentation. Single-factor analysis with lactic acid and sodium chloride demonstrated that both factors affected ethanol fermentation, but lactic acid induced more effects.

  5. Bioaccumulation of polychlorinated dibenzo-p-dioxins in sediment by oligochaetes: Influence of exposure pathway and contact time

    SciTech Connect

    Loonen, H.; Parsons, J.R.; Govers, H.A.J.; Muir, D.C.G.

    1997-07-01

    Oligochaetes (Lumbriculus variegatus) were exposed simultaneously to radiolabeled [{sup 3}H]2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) and [{sup 14}C]octachlorodibenzo-p-dioxin (OCDD) in sediment for 28 d, in order to study accumulation processes of hydrophobic substances. Elimination was studied for a further 20 d. The uptake and elimination rate constants and the bioaccumulation factors (BAFs) were determined for TCDD and OCDD in the presence and absence of sediment (overlying water). Steady-state concentrations in oligochaetes were achieved for TCDD but not for OCDD over the 28-d exposure. Biota-sediment accumulation factors (BSAFs) after a 28-d exposure were 1.6 {+-} 0.27 for TCDD and 0.07 {+-} 0.02 for OCDD. Steady-state log BAF values (lipid based) for TCDD and OCDD in oligochaetes in the overlying water were 5.9 and 5.5 L/kg, respectively. The effect of incubation time between sediment and contaminants was investigated by repeating the accumulation study after a contact period of 21 months. BSAFs of sediment-sorbed TCDD and OCDD were 1.5 to 2-fold lower for the long contact time sediment. Based on comparison of predicted accumulation from pore water and observed accumulation by sediment-exposed oligochaetes, it was concluded that 1.4-fold greater accumulation occurred due to assimilation of TCDD and OCDD from ingested sediment. This additional accumulation in the presence of sediment, not accounted for by uptake only from pore waters, was consistent with literature data for other hydrophobic organochlorines.

  6. Application of relaxed eddy accumulation (REA) on managed grassland

    NASA Astrophysics Data System (ADS)

    Riederer, M.; Hübner, J.; Ruppert, J.; Brand, W. A.; Foken, T.

    2014-05-01

    Relaxed eddy accumulation is applied for measuring fluxes of trace gases for which there is a lack of sensors fast enough in their resolution for eddy-covariance. On managed grasslands, the length of time between management events and the application of relaxed eddy accumulation has an essential influence on the determination of the proportionality factor b and thereby on the resulting flux. In this study this effect is discussed for the first time. Also, scalar similarity between proxy scalars and scalars of interest is affected until the ecosystem has completely recovered. Against this background, CO2 fluxes were continuously measured and 13CO2 isofluxes were determined with a high measurement precision on two representative days in summer 2010. This enabled the evaluation of the 13CO2 flux portion of the entire CO2 flux, in order to estimate potential influences on tracer experiments in ecosystem sciences and to compare a common method for the partitioning of the net ecosystem exchange into assimilation and respiration based on temperature and light response with an isotopic approach directly based on the isotope discrimination of the biosphere.

  7. Accumulation of mercury in Typha domingensis under field conditions.

    PubMed

    Lominchar, M A; Sierra, M J; Millán, R

    2015-01-01

    Typha species is a common wetland plant used in the treatment of urban and industrial effluents. But, despite their widespread implementation, there are not many studies based on the behaviour of this plant growing in an areas affected by mercury. The present work investigates the ability of Typha domingensis to accumulate mercury under field conditions. The study area was along the Valdeazogues river which flows through the Almadén mining district (Ciudad Real, Spain) that is considered the largest mercury reservoir in the world. The mercury concentration in different plant fractions was measured as well as the available and total concentration in the bottom sediments. The results showed that the highest mercury concentrations were found in the belowground organs. T. domingensis had a high efficiency to accumulate mercury in their organs although available metal concentrations in the environment did not exceed 0.16 mg kg(-1). Bioaccumulation factors (BAF) ranged between 121 and 3168 in roots. Furthermore, significant correlations were found between mercury concentration in all plant organs and Hg in sediments (both total and available). These results demonstrated that T. domingensis could be used as a biomonitor as well as in phytoextraction technology in areas affected by mercury.

  8. Accumulation of contaminants in fish from wastewater treatment wetlands

    USGS Publications Warehouse

    Barber, L.B.; Keefe, S.H.; Antweiler, R.C.; Taylor, H.E.; Wass, R.D.

    2006-01-01

    Increasing demands on water resources in arid environments make reclamation and reuse of municipal wastewater an important component of the water budget. Treatment wetlands can be an integral part of the water-reuse cycle providing both water-quality enhancement and habitat functions. When used for habitat, the bioaccumulation potential of contaminants in the wastewater is a critical consideration. Water and fish samples collected from the Tres Rios Demonstration Constructed Wetlands near Phoenix, Arizona, which uses secondary-treated wastewater to maintain an aquatic ecosystem in a desert environment, were analyzed for hydrophobic organic compounds (HOC) and trace elements. Semipermeable membrane devices (SPMD) were deployed to investigate uptake of HOC. The wetlands effectively removed HOC, and concentrations of herbicides, pesticides, and organic wastewater contaminants decreased 40-99% between inlet and outlet. Analysis of Tilapia mossambica and Gambusia affinis indicated accumulation of HOC, including p,p???-DDE and trans-nonachlor. The SPMD accumulated the HOC detected in the fish tissue as well as additional compounds. Trace-element concentrations in whole-fish tissue were highly variable, but were similar between the two species. Concentrations of HOC and trace elements varied in different fish tissue compartments, and concentrations in Tilapia liver tissue were greater than those in the whole organism or filet tissue. Bioconcentration factors for the trace elements ranged from 5 to 58 000 and for the HOC ranged from 530 to 150 000. ?? 2006 American Chemical Society.

  9. Accumulation of differentiating intestinal stem cell progenies drives tumorigenesis

    PubMed Central

    Zhai, Zongzhao; Kondo, Shu; Ha, Nati; Boquete, Jean-Philippe; Brunner, Michael; Ueda, Ryu; Lemaitre, Bruno

    2015-01-01

    Stem cell self-renewal and differentiation are coordinated to maintain tissue homeostasis and prevent cancer. Mutations causing stem cell proliferation are traditionally the focus of cancer studies. However, the contribution of the differentiating stem cell progenies in tumorigenesis is poorly characterized. Here we report that loss of the SOX transcription factor, Sox21a, blocks the differentiation programme of enteroblast (EB), the intestinal stem cell progeny in the adult Drosophila midgut. This results in EB accumulation and formation of tumours. Sox21a tumour initiation and growth involve stem cell proliferation induced by the unpaired 2 mitogen released from accumulating EBs generating a feed-forward loop. EBs found in the tumours are heterogeneous and grow towards the intestinal lumen. Sox21a tumours modulate their environment by secreting matrix metalloproteinase and reactive oxygen species. Enterocytes surrounding the tumours are eliminated through delamination allowing tumour progression, a process requiring JNK activation. Our data highlight the tumorigenic properties of transit differentiating cells. PMID:26690827

  10. Organohalogenated contaminants in sediments and bivalves from the Northern Arabian Gulf.

    PubMed

    Ali, Nadeem; Ali, Lulwa Naseer; Eqani, Syed Ali Musstjab Akber Shah; Ismail, Iqbal Mohammad Ibrahim; Malarvannan, Govindan; Kadi, Mohammad W; Al-Badry Basahi, Jalal Mohammed; Covaci, Adrian

    2015-12-01

    Several classes of Organohalogenated contaminants (OHCs) were determined in sediments and bivalves collected from Kuwait coast. The levels and profile of polychlorinated biphenyls (PCBs), organochlorine pesticides (OCPs) and polybrominated diphenyl ethers (PBDEs) were compared in both sediments and bivalves. PCB-153 and -138 were the major contributors towards total OHCs followed by DDT and its metabolites (DDTs). The higher contribution of DDTs (~40%) and BDE-47 (~15%) in bivalves as compared to that in associated sediments indicated high biota-sediment accumulation factors (BSAF). Higher BSAF (values for heavier PCBs, DDTs and PBDEs) also indicated their high accumulation potential from sediment into associated biota at most of the studied locations. Overall, OHCs in sediments and bivalves measured in current study were lower than those reported in the literature worldwide. Most of the sediment concentrations of OHCs (ng/g, dry weight) were in the range of permissible guideline values proposed by Canadian Sediment Quality Guidelines (CSQGs), with few exceptions for DDTs (5 ng/g) and PCBs (22.7 ng/g). Similarly, 10% of bivalve samples contained high levels (ng/g, lipid weight) of PCBs (300) and DDTs (150) and were above the set safety benchmarks. This study establishes baseline for future monitoring programs.

  11. Bioaccumulation of perfluorochemicals in sediments by the aquatic oligochaete Lumbriculus variegatus.

    PubMed

    Higgins, Christopher P; McLeod, Pamela B; MacManus-Spencer, Laura A; Luthy, Richard G

    2007-07-01

    Bioaccumulation of perfluoroalkyl sulfonates, perfluorocarboxylates, and 2-(N-ethylperfluorooctane sulfonamido) acetic acid (N-EtFOSAA) from laboratory-spiked and contaminated field sediments was assessed using the freshwater oligochaete, Lumbriculus variegatus. Semistatic batch experiments were conducted to monitor the biological uptake of these perfluorochemicals (PFCs) over 56 days. The elimination of PFCs was measured as the loss of PFCs in L. variegatus exposed to PFC-spiked sediment for 28 days and then transferred to clean sediment. The resultant data suggest that PFCs in sediments are readily bioavailable and that bioaccumulation from sediments does not continually increase with increasing perfluorocarbon chain length. Perfluorooctane sulfonate (PFOS) and perfluorononanoate were the most bioaccumulative PFCs, as measured by laboratory-based estimated steady-state biota sediment accumulation factors (BSAFs) and BSAFs measured using contaminated field sediments. Elimination rate constants for perfluoroalkyl sulfonates and perfluorocaroboxylates were generally smaller than those previously measured for other organic contaminants. Last, a PFOS precursor, N-EtFOSAA, accumulated in the worm tissues and appeared to undergo biotransformation to PFOS and other PFOS precursors. This suggests that N-EtFOSAA, which has been detected in sediments and sludge often at levels exceeding PFOS, may contribute to the bioaccumulation of PFOS in aquatic organisms.

  12. Trait-based modelling of bioaccumulation by freshwater benthic invertebrates.

    PubMed

    Sidney, Livia Alvarenga; Diepens, Noël J; Guo, Xiaoying; Koelmans, Albert A

    2016-07-01

    Understanding the role of species traits in chemical exposure is crucial for bioaccumulation and toxicity assessment of chemicals. We measured and modelled bioaccumulation of polychlorinated biphenyls (PCBs) in Chironomus riparius, Hyalella azteca, Lumbriculus variegatus and Sphaerium corneum. We used a battery test procedure with multiple enclosures in one aquarium, which maximized uniformity of exposure for the different species, such that the remaining variability was due mostly to species traits. The relative importance of uptake from either pore water or sediment ingestion was manipulated by using 28 d aged standard OECD sediment with low (1%) and medium (5%) OM content and 13 months aged sediment with medium OM (5%) content. Survival was ≥76% and wet weight increased for all species. Reproduction of H. azteca and weight gain of H. azteca and S. corneum were significantly higher in the medium OM aged sediments than in other sediments, perhaps due to a more developed microbial community (i.e., increase in food resources). Biota-sediment accumulation factors (BSAF) ranged from 3 to 114, depending on species and PCB congener, with C. riparius (3-10)BSAFs for freshwater taxonomic groups were compared with their marine counterparts and showed overlapping values. The dynamic bioaccumulation model with species-specific bioaccumulation parameters fitted well to the experimental data and showed that bioaccumulation parameters were depended on species traits. Enclosure-based battery tests and mechanistic BSAF models are expected to improve the quality of the exposure assessment in whole sediment toxicity tests.

  13. Comprehensive monitoring of synthetic musk compounds from freshwater to coastal environments in Korea: with consideration of ecological concerns and bioaccumulation.

    PubMed

    Lee, In-Seok; Kim, Un-Jung; Oh, Jeong-Eun; Choi, Minkyu; Hwang, Dong-Woon

    2014-02-01

    This study investigated the concentration levels of synthetic musk compounds (SMCs), including HHCB (1,3,4,6,7,8-hexahydro-4,6,6,7,8,8-hexamethylcyclopenta-(g)-2-benzopyran), AHTN (7-acetyl-1,1,3,4,4,6-hexamethyl-1,2,3,4-tetrahydronaphthalene), MK (Musk ketone), and MX (Musk xylene), in freshwater, freshwater and coastal sediments, and coastal bivalves from freshwater to coastal environments. The levels in freshwater close to sewage treatment plants (STPs) showed higher contamination and suggested a medium to high ecological risk, especially posed by MK making more than 65% contribution to the combined risk by the total SMCs. STP effluent discharge points showed higher SMC concentrations in freshwater and coastal sediments. Predominant HHCB contributions regardless of sample types such as abiota and biota were consistent with the greater usage of HHCB than AHTN and MK in Korea. However, the higher contributions of AHTN than those predicted from AHTN consumption in Korea indicate the need for further research on the characteristic properties of individual SMCs, including partitioning, biomagnification, degradation, and metabolism for a realistic risk characterization. With respect to the highest HHCB levels in coastal bivalves reported, we determined the biota-sediment accumulation factor (BSAF) to understand the bioaccumulation of SMCs between coastal sediment and bivalves. The calculated BSAF values suggested that SMCs in bivalves were not biomagnified via the food chain but mostly partitioned from sediment. To our knowledge, this is the first study to measure BSAF values of SMCs, especially HHCB, AHTN, and MK, in coastal bivalve samples.

  14. Bioaccumulation of Legacy and Emerging Organochlorine Contaminants in Lumbriculus variegatus.

    PubMed

    Dang, Viet D; Kroll, Kevin J; Supowit, Samuel D; Halden, Rolf U; Denslow, Nancy D

    2016-07-01

    Freshwater sediment-dwelling Lumbriculus variegatus is known to serve as a vector for the transfer of contaminants from sediments to higher trophic level organisms, but limited data exist on the bioaccumulation of chemicals associated with sediments containing high total organic carbon (TOC). In the current study, sediments from the north shore area of Lake Apopka (Florida, USA), containing very high TOC [39 % (w/w)], were spiked with four chemicals-p,p'-dichlorordiphenyldichloroethylene (p,p'-DDE), dieldrin, fipronil, and triclosan-individually or in a mixture of the four and then used for bioaccumulation studies. Tissue concentrations of chemicals in L. variegatus were measured at 2, 7, 14, 21, and 28 days of exposure, and the bioaccumulation potential was evaluated using biosediment accumulation factors [BSAF (goc/glipid)]. Increase in total body burdens of all four chemicals in L. variegatus was rapid at day 2 and reached a steady-state level after 7 days in both single and mixture experiments. Tissue concentrations of fipronil peaked after 2 days and then decreased by 70 % in sediment experiments suggesting that in addition to the degradation of fipronil that occurred in the sediment, L. variegatus may also be able to metabolize fipronil. The calculated 28-day BSAF values varied among the chemicals and increased in the order fipronil (1.1) < triclosan (1.4) < dieldrin (21.8) < p,p'-DDE (49.8) in correspondence with the increasing degree of their hydrophobicity. The relatively high BSAF values for p,p'-DDE and dieldrin probably resulted from lower-than-expected sorption of chemicals to sediment organic matter either due to the nature of the plant-derived organic matter, as a result of the relatively short equilibration time among the various compartments, or due to ingestion of sediment particles by the worms.

  15. Accumulation of the mycotoxin patulin in the presence of gluconic acid contributes to pathogenicity of Penicillium expansum.

    PubMed

    Barad, Shiri; Horowitz, Sigal Brown; Kobiler, Ilana; Sherman, Amir; Prusky, Dov

    2014-01-01

    Penicillium expansum, the causal agent of blue mold rot, causes severe postharvest fruit maceration through secretion of D-gluconic acid (GLA) and secondary metabolites such as the mycotoxin patulin in colonized tissue. GLA involvement in pathogenicity has been suggested but the mechanism of patulin accumulation and its contribution to P. expansum pathogenicity remain unclear. The roles of GLA and patulin accumulation in P. expansum pathogenicity were studied using i) glucose oxidase GOX2-RNAi mutants exhibiting decreased GOX2 expression, GLA accumulation, and reduced pathogenicity; ii) IDH-RNAi mutants exhibiting downregulation of IDH (the last gene in patulin biosynthesis), reduced patulin accumulation, and no effect on GLA level; and iii) PACC-RNAi mutants exhibiting downregulation of both GOX2 and IDH that reduced GLA and patulin production. Present results indicate that conditions enhancing the decrease in GLA accumulation by GOX2-RNAi and PACC-RNAi mutants, and not low pH, affected patulin accumulation, suggesting GLA production as the driving force for further patulin accumulation. Thus, it is suggested that GLA accumulation may modulate patulin synthesis as a direct precursor under dynamic pH conditions modulating the activation of the transcription factor PACC and the consequent pathogenicity factors, which contribute to host-tissue colonization by P. expansum.

  16. Heat accumulation during sequential cortical bone drilling.

    PubMed

    Palmisano, Andrew C; Tai, Bruce L; Belmont, Barry; Irwin, Todd A; Shih, Albert; Holmes, James R

    2016-03-01

    Significant research exists regarding heat production during single-hole bone drilling. No published data exist regarding repetitive sequential drilling. This study elucidates the phenomenon of heat accumulation for sequential drilling with both Kirschner wires (K wires) and standard two-flute twist drills. It was hypothesized that cumulative heat would result in a higher temperature with each subsequent drill pass. Nine holes in a 3 × 3 array were drilled sequentially on moistened cadaveric tibia bone kept at body temperature (about 37 °C). Four thermocouples were placed at the center of four adjacent holes and 2 mm below the surface. A battery-driven hand drill guided by a servo-controlled motion system was used. Six samples were drilled with each tool (2.0 mm K wire and 2.0 and 2.5 mm standard drills). K wire drilling increased temperature from 5 °C at the first hole to 20 °C at holes 6 through 9. A similar trend was found in standard drills with less significant increments. The maximum temperatures of both tools increased from <0.5 °C to nearly 13 °C. The difference between drill sizes was found to be insignificant (P > 0.05). In conclusion, heat accumulated during sequential drilling, with size difference being insignificant. K wire produced more heat than its twist-drill counterparts. This study has demonstrated the heat accumulation phenomenon and its significant effect on temperature. Maximizing the drilling field and reducing the number of drill passes may decrease bone injury.

  17. Test Plan - Solids Accumulation Scouting Studies

    SciTech Connect

    Duignan, M. R.; Steeper, T. J.; Steimke, J. L.; Fowley, M. D.

    2012-05-10

    This plan documents the highlights of the Solids Accumulations Scouting Studies test; a project, from Washington River Protection Solutions (WRPS), that began on February 1, 2012. During the last 12 weeks considerable progress has been made to design and plan methods that will be used to estimate the concentration and distribution of heavy fissile solids in accumulated solids in the Hanford double-shell tank (DST) 241-AW-105 (AW-105), which is the primary goal of this task. This DST will be one of the several waste feed delivery staging tanks designated to feed the Pretreatment Facility (PTF) of the Waste Treatment and Immobilization Plant (WTP). Note that over the length of the waste feed delivery mission AW-105 is currently identified as having the most fill empty cycles of any DST feed tanks, which is the reason for modeling this particular tank. At SRNL an existing test facility, the Mixing Demonstration Tank, which will be modified for the present work, will use stainless steel particles in a simulant that represents Hanford waste to perform mock staging tanks transfers that will allow solids to accumulate in the tank heel. The concentration and location of the mock fissile particles will be measured in these scoping studies to produce information that will be used to better plan larger scaled tests. Included in these studies is a secondary goal of developing measurement methods to accomplish the primary goal. These methods will be evaluated for use in the larger scale experiments. Included in this plan are the several pretest activities that will validate the measurement techniques that are currently in various phases of construction. Aspects of each technique, e.g., particle separations, volume determinations, topographical mapping, and core sampling, have been tested in bench-top trials, as discussed herein, but the actual equipment to be employed during the full test will need evaluation after fabrication and integration into the test facility.

  18. Uptake, bioavailability and elimination of hydrophobic compounds in earthworms (Eisenia andrei) in field-contaminated soil

    SciTech Connect

    Belfroid, A.; Berg, M. van den; Seinen, W.; Hermens, J.; Gestel, K. van

    1995-04-01

    Uptake, accumulation, and elimination of hydrophobic organic chemicals in earthworms (Eisenia andrei) exposed to field-contaminated Volgermeerpolder soil was studied. Earthworms were able to take up chlorobenzenes and polychlorobiphenyls (PCBs), but body burdens did not exceed concentrations measured in the soil. For the chlorobenzenes, steady-state concentrations in the worms and biota-to-soil accumulation factor (BSAF) values were much smaller than expected based on earlier experiments, suggesting a decreased bioavailability in the Volgermeerpolder soil. Comparison of the PCB accumulation pattern in worms to the pattern in soil showed that biotransformation of the studied PCBs is of minor importance in this species. Elimination of all chemicals studied was monophasic, with the exception of hexachlorobenzene, which showed a biphasic elimination. The elimination half-life for the initial fast phase of this compound is comparable to the elimination measured in previous studies. Elimination rate constants decreased with increasing log K{sub ow}.

  19. Neurodegeneration with Brain Iron Accumulation: An Overview

    PubMed Central

    TONEKABONI, Seyed Hassan; MOLLAMOHAMMADI, Mohsen

    2014-01-01

    Objective Neurodegeneration with brain iron accumulation (NBIA) is a group of neurodegenerative disorder with deposition of iron in the brain (mainly Basal Ganglia) leading to a progressive Parkinsonism, spasticity, dystonia, retinal degeneration, optic atrophy often accompanied by psychiatric manifestations and cognitive decline. 8 of the 10 genetically defined NBIA types are inherited as autosomal recessive and the remaining two by autosomal dominant and X-linked dominant manner. Brain MRI findings are almost specific and show abnormal brain iron deposition in basal ganglia some other related anatomical locations. In some types of NBIA cerebellar atrophy is the major finding in MRI. PMID:25657764

  20. Volume accumulator design analysis computer codes

    NASA Technical Reports Server (NTRS)

    Whitaker, W. D.; Shimazaki, T. T.

    1973-01-01

    The computer codes, VANEP and VANES, were written and used to aid in the design and performance calculation of the volume accumulator units (VAU) for the 5-kwe reactor thermoelectric system. VANEP computes the VAU design which meets the primary coolant loop VAU volume and pressure performance requirements. VANES computes the performance of the VAU design, determined from the VANEP code, at the conditions of the secondary coolant loop. The codes can also compute the performance characteristics of the VAU's under conditions of possible modes of failure which still permit continued system operation.

  1. Storing wind energy into electrical accumulators

    NASA Astrophysics Data System (ADS)

    Dordescu, M.; Petrescu, D. I.; Erdodi, G. M.

    2016-12-01

    Shall be determined, in this work, the energy stored in the accumulators electrical, AE, at a wind system operating at wind speeds time-varying. mechanical energy caught in the turbine from the wind, (TV), is transformed into electrical energy by the generator synchronous with the permanent magnets, GSMP. The Generator synchronous with the permanent magnets saws, via a rectifier, energy in a battery AE, finished in a choice of two: variant 1-unregulated rectifier and variant of the 2-controlled rectifier and task adapted. Through simulation determine the differences between the two versions

  2. How Financial Literacy Affects Household Wealth Accumulation.

    PubMed

    Behrman, Jere R; Mitchell, Olivia S; Soo, Cindy K; Bravo, David

    2012-05-01

    This study isolates the causal effects of financial literacy and schooling on wealth accumulation using a new household dataset and an instrumental variables (IV) approach. Financial literacy and schooling attainment are both strongly positively associated with wealth outcomes in linear regression models, whereas the IV estimates reveal even more potent effects of financial literacy. They also indicate that the schooling effect only becomes positive when interacted with financial literacy. Estimated impacts are substantial enough to imply that investments in financial literacy could have large wealth payoffs.

  3. External accumulation of radionuclide in hepatic hydrothorax

    SciTech Connect

    Albin, R.J.; Johnston, G.S.

    1989-05-01

    Hepatic hydrothorax is a complication in approximately 5% of patients with cirrhosis. Ascites is almost always present and helps to suggest the correct diagnosis. However, when ascites is absent, radionuclide imaging has proven to be helpful in establishing that the pleural effusion originated from ascitic fluid. When pleural fluid is rapidly removed, such as by thoracostomy tube drainage, the radioisotope may accumulate outside the thorax and produce a negative scan of the chest. When the radionuclide scan is nondiagnostic and the pleural space is being rapidly drained, the pleural fluid collecting system should always be imaged before rejecting a diagnosis of hepatic hydrothorax.

  4. How Financial Literacy Affects Household Wealth Accumulation

    PubMed Central

    Behrman, Jere R.; Mitchell, Olivia S.; Soo, Cindy K.; Bravo, David

    2012-01-01

    This study isolates the causal effects of financial literacy and schooling on wealth accumulation using a new household dataset and an instrumental variables (IV) approach. Financial literacy and schooling attainment are both strongly positively associated with wealth outcomes in linear regression models, whereas the IV estimates reveal even more potent effects of financial literacy. They also indicate that the schooling effect only becomes positive when interacted with financial literacy. Estimated impacts are substantial enough to imply that investments in financial literacy could have large wealth payoffs. PMID:23355747

  5. Financial Literacy, Schooling, and Wealth Accumulation. NBER Working Paper No. 16452

    ERIC Educational Resources Information Center

    Behrman, Jere R.; Mitchell, Olivia S.; Soo, Cindy; Bravo, David

    2010-01-01

    Financial literacy and schooling attainment have been linked to household wealth accumulation. Yet prior findings may be biased due to noisy measures of financial literacy and schooling, as well as unobserved factors such as ability, intelligence, and motivation that could enhance financial literacy and schooling but also directly affect wealth…

  6. ACCUMULATION RATE OF MICROBIAL BIOMASS AT TWO PERMEABLE REACTIVE BARRIER SITES

    EPA Science Inventory

    Accumulation of mineral precipitates and microbial biomass are key factors that impact the long-term performance of in-situ Permeable Reactive Barriers for treating contaminated groundwater. Both processes can impact remedial performance by decreasing zero-valent iron reactivity...

  7. Accumulation of neurons differentiated from mouse embryonic stem cells in particular areas of culture plate surface.

    PubMed

    Kitazawa, Ayako; Naka, Yukie; Yamaguchi, Hiroko; Shimizu, Norio

    2010-08-01

    Nanoscale magnetic beads coated with nerve growth factor (NGF) allow us to accumulate neurons differentiated from mouse ES cells in a selected area of the culture plate surface using a magnet. Neurons with neurite outgrowths within a particular area expressed TrkA and incorporated beads in the soma.

  8. Peer Effects and Human Capital Accumulation: the Externalities of ADD. NBER Working Paper No. 14354

    ERIC Educational Resources Information Center

    Aizer, Anna

    2008-01-01

    Although recent work has shown that peers affect human capital accumulation, the mechanisms are not well understood. Knowing why high achieving peers matter, because of their innate ability, disciplined behavior or some other factor, has important implications for our understanding of the education production function and for how we organize…

  9. Genome wide association mapping of Aspergillus flavus and aflatoxin accumulation resistance in maize

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Contamination of maize with aflatoxin, produced by the fungus Aspergillus flavus, has severe health and economic consequences. Efforts to reduce aflatoxin accumulation in maize have focused on identifying and selecting germplasm with natural host resistance factors, and several maize lines with sign...

  10. Chloroquine accumulation by purified plasma membranes from Plasmodium falciparum.

    PubMed

    Elandaloussi, Laurence M; Smith, Peter J

    2006-01-01

    Resistance of Plasmodium falciparum to chloroquine (CQ) has been associated with a decrease in CQ accumulation by parasitized erythrocytes. This study aimed at investigating the role of parasite plasma membranes (PPM) in the mechanism of CQ accumulation. CQ accumulation capabilities of membranes were determined using tritiated CQ. PPM isolated from chloroquine-sensitive parasites were found to accumulate less CQ than those isolated from chloroquine-resistant parasites. However, CQ accumulation was found to be ATP-independent suggesting that this accumulation results from binding rather than transport.

  11. Accumulation of indium-111-labeled granulocytes in malignant tumors

    SciTech Connect

    Schmidt, K.G.; Rasmussen, J.W.; Wedebye, I.M.; Frederiksen, P.B.; Pedersen, N.T.

    1988-04-01

    In a retrospective study of 220 (/sup 111/In)granulocyte scintigrams from 208 patients, 25 patients had malignant neoplasms. Among these, tumor uptake of /sup 111/In activity was observed in ten patients (intense activity in two patients with non-Hodgkin's lymphoma and colonic carcinoma, respectively; moderate uptake in a patient with non-Hodgkin's lymphoma, and in a patient with an ovarian carcinoma; weak activity in three patients with cerebral neoplasms; and activity within otherwise cold metastatic lesions of the liver in three patients). Microscopic investigation following specific granulocyte staining revealed the greatest extent of granulocyte infiltration in the tumors which took up /sup 111/In activity, emphasizing the importance of tumor granulocyte infiltration as the single most important factor underlying tumor accumulation of /sup 111/In activity during (/sup 111/In)granulocyte scintigraphy.

  12. Effects of specific organs on seed oil accumulation in Brassica napus L.

    PubMed

    Liu, Jing; Hua, Wei; Yang, Hongli; Guo, Tingting; Sun, Xingchao; Wang, Xinfa; Liu, Guihua; Wang, Hanzhong

    2014-10-01

    Seed oil content is an important agricultural characteristic in rapeseed breeding. Genetic analysis shows that the mother plant and the embryo play critical roles in regulating seed oil accumulation. However, the overwhelming majority of previous studies have focused on oil synthesis in the developing seed of rapeseed. In this study, to elucidate the roles of reproductive organs on oil accumulation, silique, ovule, and embryo from three rapeseed lines with high oil content (zy036, 6F313, and 61616) were cultured in vitro. The results suggest that zy036 silique wall, 6F313 seed coat, and 61616 embryo have positive impacts on the seed oil accumulation. In zy036, our previous studies show that high photosynthetic activity of the silique wall contributes to seed oil accumulation (Hua et al., 2012). Herein, by transcriptome sequencing and sucrose detection, we found that sugar transport in 6F313 seed coat might regulate the efficiency of oil synthesis by controlling sugar concentration in ovules. In 61616 embryos, high oil accumulation efficiency was partly induced by the elevated expression of fatty-acid biosynthesis-related genes. Our investigations show three organ-specific mechanisms regulating oil synthesis in rapeseed. This study provides new insights into the factors affecting seed oil accumulation in rapeseed and other oil crops.

  13. Impact Of Particle Agglomeration On Accumulation Rates In The Glass Discharge Riser Of HLW Melter

    SciTech Connect

    Kruger, A. A.; Rodriguez, C. A.; Matyas, J.; Owen, A. T.; Jansik, D. P.; Lang, J. B.

    2012-11-12

    The major factor limiting waste loading in continuous high-level radioactive waste (HLW) melters is an accumulation of particles in the glass discharge riser during a frequent and periodic idling of more than 20 days. An excessive accumulation can produce robust layers a few centimeters thick, which may clog the riser, preventing molten glass from being poured into canisters. Since the accumulation rate is driven by the size of particles we investigated with x-ray microtomography, scanning electron microscopy, and image analysis the impact of spinel forming components, noble metals, and alumina on the size, concentration, and spatial distribution of particles, and on the accumulation rate. Increased concentrations of Fe and Ni in the baseline glass resulted in the formation of large agglomerates that grew over the time to an average size of ~185+-155 {mu}m, and produced >3 mm thick layer after 120 h at 850 deg C. The noble metals decreased the particle size, and therefore significantly slowed down the accumulation rate. Addition of alumina resulted in the formation of a network of spinel dendrites which prevented accumulation of particles into compact layers.

  14. Screening of Cucumis sativus as a new arsenic-accumulating plant and its arsenic accumulation in hydroponic culture.

    PubMed

    Hong, Sun Hwa; Choi, Sun Ah; Yoon, Hyeon; Cho, Kyung-Suk

    2011-01-01

    Phytoextraction is a remediation technology with a promising application for removing arsenic (As) from soils and waters. Several plant species were evaluated for their As accumulation capacity in hydroponic culture amended with As. Cucumis sativus (cucumber) displayed the highest tolerance against As among 4 plants tested in this study (corn, wheat, sorghum and cucumber). The germination ratio of Cucumis sativus was more than 50% at the high concentration of 5,000 mg-As/l. In Cucumis sativus grown in a solution contaminated with 25 mg-As/l, the accumulated As concentrations in the shoot and root were 675.5 ± 11.5 and 312.0 ± 163.4 mg/kg, respectively, and the corresponding values of the translocation and bioaccumulation factors for As were 1.9 ± 0.9 and 21.1 ± 8.4, respectively. These results indicate Cucumis sativus is to be a candidate plant for phytoextraction of As from soils and water.

  15. Bioaccumulation of Polybrominated Diphenyl Ethers by Tubifex Tubifex.

    PubMed

    Kolar, Boris; Arnuš, Lovro; Križanec, Boštjan; Peijnenburg, Willie; Kos Durjava, Mojca

    2016-01-01

    The selective uptake of polybrominated diphenyl ethers (PBDEs) by oligochaetes makes it possible to assess the bioaccumulation of individual congeners in commercial mixtures. Twenty-one congeners from three BDE commercial mixtures (TBDE-71, TBDE-79 and TBDE-83R) and as individual congeners (BDE-77, BDE-126, BDE-198 and BDE-204) were tested on Tubifex tubifex in accordance with the OECD TG 315 "Bioaccumulation in Sediment-Dwelling Benthic Oligochaetes". All the congeners that were spiked in the sediment were detected at the end of the uptake phase and at the end of the experiment. The bioaccumulation factor (BAF), the kinetic bioaccumulation factor (BAFK) and the biotasediment accumulation factor (BSAF) were calculated, and indicate a high bioaccumulation potential for tri- to hexa-BDEs and a lower bioaccumulation potential for hepta- to deca-BDEs. The penta-homologues BDE-99 and BDE-100 showed the highest BSAFs of 4.84 and 5.85 (BAFs of 7.34 and 9.01), while the nona- and deca-BDEs exhibit bioaccumulation in up to one-order-lower concentrations. The change in the bioaccumulation potential between the group of trito hexa-BDEs and hepta- to deca-BDEs correlated with the generally accepted molecular-mass threshold for the molecular transition through biological membranes (700 g/mol).

  16. Stability of organic carbon accumulating in Spartina alterniflora-dominated salt marshes of the Mid-Atlantic U.S.

    NASA Astrophysics Data System (ADS)

    Unger, Viktoria; Elsey-Quirk, Tracy; Sommerfield, Christopher; Velinsky, David

    2016-12-01

    Organic carbon sequestration in salt marsh soils is a function of factors that influence both spatial variability and chemical stability of accumulating carbon. Refractory carbon (slowly decomposed) may be the most important in terms of long-term sequestration and is widely referred to in models of carbon storage; however, little information exists about the quantity and variability of refractory carbon accumulation in marshes. In this study, total (CT), labile (CL) and refractory (CR) organic carbon accumulation rates were measured for Spartina alterniflora-dominated marshes representing different geomorphological settings with a range of vertical accretion rates. Three 50-cm long cores were collected in each of three marshes in Barnegat Bay and three marshes in Delaware Estuary, USA. Rates of C accumulation were calculated using Cesium-137 dating and the relative stability of soil organic carbon was quantified using acid-hydrolysis. CT accumulation ranged over fourfold among marshes from 72 to 346 g m-2 yr-1. CT and CL accumulation increased with increasing mineral sediment accumulation, while CR accumulation was uniform across cores averaging 78 ± 5 g m-2 yr-1. Similar rates of CR accumulation across marsh areas with different accretion and mineral sediment accumulation rates was associated with a decline in the CR:CL density ratio as mineral volume increased. Our results suggest that carbon accumulation is higher in salt marshes with higher mineral sedimentation due, primarily, to the burial of labile carbon, and that there is a limit on the rate of chemically recalcitrant carbon accumulation in marsh soils.

  17. Enhanced accumulation of PCB congeners by Baltic Sea blue mussels, Mytilus edulis, with increased algae enrichment

    SciTech Connect

    Gilek, M.; Bjoerk, M.; Broman, D.; Kautsky, N.; Naef, C.

    1996-09-01

    The objective of this study was to examine if natural variations in the quantity of phytoplankton-derived particulate and dissolved organic carbon influences the accumulation of polychlorinated biphenyls (PCBs) in the tissues of Baltic Sea blue mussels (Mytilus edulis L.). In a laboratory flow-through experiment the authors exposed M. edulis to the technical PCB mixture Aroclor{reg_sign} 1248 for 21 d at three different enrichments of the unicellular green algae Chlamydomonas sp., 0.10, 0.16, and 0.32 mg particulate organic carbon (POC)/L. Tissue and water concentrations were determined for seven PCB congeners and 21-d bioaccumulation factors were calculated against total water concentrations. Contrary to what would be expected, an increase in algae enrichment from 0.10 to 0.32 mg POC/L resulted in an enhanced PCB accumulation by a factor of approx. 2. This increase in PCB accumulation was more pronounced for PCB congeners with lower hydrophobicity. These observations have implications for the design of laboratory accumulation studies and potentially for PCB accumulation and cycling in field populations of suspension-feeding mussels in response to changes in eutrophication status.

  18. Accumulation of contaminants of emerging concern in food crops-part 2: Plant distribution.

    PubMed

    Hyland, Katherine C; Blaine, Andrea C; Higgins, Christopher P

    2015-10-01

    Arid agricultural regions often turn to using treated wastewater (reclaimed water) to irrigate food crops. Concerns arise, however, when considering the potential for persistent contaminants of emerging concern to accumulate into plants intended for human consumption. The present study examined the accumulation of a suite of 9 contaminants of emerging concern into 2 representative food crops, lettuce and strawberry, following uptake via the roots and subsequent distribution to other plant tissues. Calculating accumulation metrics (concentration factors) allowed for comparison of the compartmental affinity of each chemical for each plant tissue compartment. The root concentration factor was found to exhibit a positive linear correlation with the pH-adjusted octanol-water partition coefficient (DOW ) for the target contaminants of emerging concern. Coupled with the concentration-dependent accumulation observed in the roots, this result implies that accumulation of these contaminants of emerging concern into plant roots is driven by passive partitioning. Of the contaminants of emerging concern examined, nonionizable contaminants, such as triclocarban, carbamazepine, and organophosphate flame retardants displayed the greatest potential for translocation from the roots to above-ground plant compartments. In particular, the organophosphate flame retardants displayed increasing affinity for shoots and fruits with decreasing size/octanol-water partition coefficient (KOW ). Cationic diphenhydramine and anionic sulfamethoxazole, once transported to the shoots of the strawberry plant, demonstrated the greatest potential of the contaminants examined to be then carried to the edible fruit portion.

  19. Accumulation of uranium by immobilized persimmon tannin

    SciTech Connect

    Sakaguchi, Takashi; Nakajima, Akira )

    1994-01-01

    We have discovered that the extracted juice of unripe astringent persimmon fruit, designated as kakishibu or shibuol, has an extremely high affinity for uranium. To develop efficient adsorbents for uranium, we tried to immobilize kakishibu (persimmon tannin) with various aldehydes and mineral acids. Persimmon tannin immobilized with glutaraldehyde can accumulate 1.71 g (14 mEq U) of uranium per gram of the adsorbent. The uranium accumulating capacity of this adsorbent is several times greater than that of commercially available chelating resins (2-3 mEq/g). Immobilized persimmon tannin has the most favorable features for uranium recovery; high selective adsorption ability, rapid adsorption rate, and applicability in both column and batch systems. The uranium retained on immobilized persimmon tannin can be quantitatively and easily eluted with a very dilute acid, and the adsorbent can thus be easily recycled in the adsorption-desorption process. Immobilized persimmon tannin also has a high affinity for thorium. 23 refs., 13 figs., 7 tabs.

  20. Electron accumulation layer in ultrastrong magnetic field

    NASA Astrophysics Data System (ADS)

    Sammon, M.; Fu, Han; Shklovskii, B. I.

    2017-02-01

    When a three-dimensional electron gas is subjected to a very strong magnetic field, it can reach a quasi-onedimensional state in which all electrons occupy the lowest Landau level. This state is referred to as the extreme quantum limit ( EQL ) and has been studied in the physics of pulsars and bulk semiconductors. Here we present a theory of the EQL phase in electron accumulation layers created by an external electric field E at the surface of a semiconductor with a large Bohr radius such as InSb , PbTe , SrTiO 3 ( STO ) , and particularly in the LaA 1 O 3 / SrTiO 3 ( LAO / STO ) heterostructure. The phase diagram of the electron gas in the plane of the magnetic field strength and the electron surface concentration is found for different orientations of the magnetic field. We find that in addition to the quasi-classical metallic phase ( M ), there is a metallic EQL phase, as well as an insulating Wigner crystal state ( WC ). Within the EQL phase, the Thomas-Fermi approximation is used to find the electron density and the electrostatic potential profiles of the accumulation layer. Additionally, the quantum capacitance for each phase is calculated as a tool for experimental study of these phase diagrams.

  1. Normative evidence accumulation in unpredictable environments

    PubMed Central

    Glaze, Christopher M; Kable, Joseph W; Gold, Joshua I

    2015-01-01

    In our dynamic world, decisions about noisy stimuli can require temporal accumulation of evidence to identify steady signals, differentiation to detect unpredictable changes in those signals, or both. Normative models can account for learning in these environments but have not yet been applied to faster decision processes. We present a novel, normative formulation of adaptive learning models that forms decisions by acting as a leaky accumulator with non-absorbing bounds. These dynamics, derived for both discrete and continuous cases, depend on the expected rate of change of the statistics of the evidence and balance signal identification and change detection. We found that, for two different tasks, human subjects learned these expectations, albeit imperfectly, then used them to make decisions in accordance with the normative model. The results represent a unified, empirically supported account of decision-making in unpredictable environments that provides new insights into the expectation-driven dynamics of the underlying neural signals. DOI: http://dx.doi.org/10.7554/eLife.08825.001 PMID:26322383

  2. Predicting Accumulations of Ice on Aerodynamic Surfaces

    NASA Technical Reports Server (NTRS)

    Bidwell, Colin; Potapczuk, Mark; Addy, Gene; Wright, William

    2003-01-01

    LEWICE is a computer program that predicts the accumulation of ice on two-dimensional aerodynamic surfaces under conditions representative of the flight of an aircraft through an icing cloud. The software first calculates the airflow surrounding the body of interest, then uses the airflow to compute the trajectories of water droplets that impinge on the surface of the body. The droplet trajectories are also used to compute impingement limits and local collection efficiencies, which are used in subsequent ice-growth calculations and are also useful for designing systems to protect against icing. Next, the software predicts the shape of accumulating ice by modeling transfers of mass and energy in small control volumes. The foregoing computations are repeated over several computational time steps until the total icing exposure time is reached. Results of computations by LEWICE have been compared with an extensive database of measured ice shapes obtained from experiments, and have been shown to closely approximate those shapes under most conditions of interest to the aviation community.

  3. SF-1 deficiency causes lipid accumulation in Leydig cells via suppression of STAR and CYP11A1.

    PubMed

    Hatano, Megumi; Migita, Toshiro; Ohishi, Tomokazu; Shima, Yuichi; Ogawa, Yoshihiro; Morohashi, Ken-Ichirou; Hasegawa, Yukihiro; Shibasaki, Futoshi

    2016-11-01

    Genetic mutations of steroidogenic factor 1 (also known as Ad4BP or Nr5a1) have increasingly been reported in patients with 46,XY disorders of sex development (46,XY disorders of sex development). However, because the phenotype of 46,XY disorders of sex development with a steroidogenic factor 1 mutation is wide-ranging, its precise diagnosis remains a clinical problem. We previously reported the frequent occurrence of lipid accumulation in Leydig cells among patients with 46,XY disorders of sex development with a steroidogenic factor 1 mutation, an observation also reported by other authors. To address the mechanism of lipid accumulation in this disease, we examined the effects of steroidogenic factor 1 deficiency on downstream targets of steroidogenic factor 1 in in vitro and in vivo. We found that lipid accumulation in Leydig cells was enhanced after puberty in heterozygous steroidogenic factor 1 knockout mice compared with wild-type mice, and was accompanied by a significant decrease in steroidogenic acute regulatory protein and CYP11A1 expression. In mouse Leydig cell lines, steroidogenic factor 1 knockdown induced a remarkable accumulation of neutral lipids and cholesterol with reduced androgen levels. Steroidogenic factor 1 knockdown reduced the expression of steroidogenic acute regulatory protein and CYP11A1, both of which are transcriptional targets of steroidogenic factor 1 and key molecules for steroidogenesis from cholesterol in the mitochondria. Knockdown of either steroidogenic acute regulatory protein or CYP11A1 also induced lipid accumulation, and knockdown of both had an additive effect. Our data suggested that lipid accumulation in the Leydig cells of the 46,XY disorders of sex development phenotype with a steroidogenic factor 1 mutation is due, at least in part, to the suppression of steroidogenic acute regulatory protein and CYP11A1, and a resulting increase in unmetabolized cholesterol.

  4. The intra-tumoral relationship between microcirculation, interstitial fluid pressure and liposome accumulation.

    PubMed

    Stapleton, Shawn; Milosevic, Michael; Tannock, Ian F; Allen, Christine; Jaffray, David A

    2015-08-10

    The heterogeneous intra-tumoral accumulation of liposomes has been linked to both the chaotic tumor microcirculation and to elevated interstitial fluid pressure (IFP). Here, we explored the relationship between tumor microcirculation, IFP, and the intra-tumoral accumulation of liposomes. Measurements of the tumor microcirculation using perfusion imaging, IFP using a novel image-guided robotic needle positioning system, and the intra-tumoral distribution of liposomes using volumetric micro-CT imaging were performed in mice bearing subcutaneous and orthotopic MDA-MB-231 tumors. Intra-tumoral perfusion and IFP were substantially different between the two tumor implantation sites. Tumor perfusion and not vascular permeability was found to be the primary mediator of the intra-tumoral accumulation of CT-liposomes. A strong relationship was observed between the radial distribution of IFP, metrics of tumor perfusion, and the intra-tumoral accumulation of liposomes. Tumors with elevated central IFP that decreased at the periphery had low perfusion and low levels of CT-liposome accumulation that increased towards the periphery. Conversely, tumors with low and radially uniform IFP exhibited higher levels of tumor perfusion and CT-liposome accumulation. Both tumor perfusion and elevated IFP exhibit substantial intra-tumoral heterogeneity and both play an integral role in mediating the intra-tumoral accumulation of liposomes through a complex interactive effect. Measuring IFP in the clinical setting remains challenging and these results demonstrate that tumor perfusion imaging alone provides a robust non-invasive method to identify factors that contribute to poor liposome accumulation and may allow for pre-selection of patients that are more likely to respond to nanoparticle therapy.

  5. Levetiracetam Prevents Kindling-Induced Asymmetric Accumulation of Hippocampal 7S SNARE Complexes

    PubMed Central

    Matveeva, Elena A.; Vanaman, Thomas C.; Whiteheart, Sidney W.; Slevin, John T.

    2008-01-01

    Summary Purpose Understanding the molecular mechanisms underlying epilepsy is crucial to designing novel therapeutic regimens. This report focuses on alterations in the secretory machinery responsible for neurotransmitter (NT) release. Soluble N-ethylmaleimide Sensitive Factor (NSF) Attachment Protein Receptor (SNARE) complexes mediate the fusion of synaptic vesicle and active zone membranes thus mediating NT secretion. SNARE regulators control where and when SNARE complexes are formed. Previous studies showed an asymmetric accumulation of SNARE complexes (7SC) in the ipsilateral hippocampus of kindled animals. The present studies probe the persistence of 7SC accumulation and the effect of the anticonvulsant, levetiracetam (LEV), on 7SC and SNARE regulators. Method Quantitative western blotting was used to monitor levels of 7SC and SNARE regulators in hippocampal synaptosomes from kindled animals both before and after LEV treatment. Results The asymmetric accumulation of 7SC is present one year post-amygdalar kindling. The synaptic vesicle protein, SV2, a primary LEV-binding protein, and the SNARE regulator Tomosyn increase whereas NSF decreases in association with this accumulation. Treatment with LEV prevented kindling-induced accumulation of SV2, but did not affect the transient increase of Tomosyn or the long-term decrease of NSF. LEV treatment retarded the electrical and behavioral concomitants of amygdalar kindling coincident with a decrease in accumulation of 7SC. Conclusions The ipsilateral hippocampal accumulation of SNARE complexes is an altered molecular process associated with kindling that appears permanent. Kindling epileptogenesis alters synaptosomal levels of the SNARE regulators, NSF, SV2, and Tomosyn. Concomitant treatment with LEV reverses the kindling-induced 7SC accumulation and increase of SV2. PMID:18513349

  6. Radiocarbon Dating, Chronologic Framework, and Changes in Accumulation Rates of Holocene Estuarine Sediments from Chesapeake Bay

    NASA Astrophysics Data System (ADS)

    Colman, Steven M.; Baucom, Pattie C.; Bratton, John F.; Cronin, Thomas M.; McGeehin, John P.; Willard, Debra; Zimmerman, Andrew R.; Vogt, Peter R.

    2002-01-01

    Rapidly accumulating Holocene sediments in estuaries commonly are difficult to sample and date. In Chesapeake Bay, we obtained sediment cores as much as 20 m in length and used numerous radiocarbon ages measured by accelerator mass spectrometry methods to provide the first detailed chronologies of Holocene sediment accumulation in the bay. Carbon in these sediments is a complex mixture of materials from a variety of sources. Analyses of different components of the sediments show that total organic carbon ages are largely unreliable, because much of the carbon (including coal) has been transported to the bay from upstream sources and is older than sediments in which it was deposited. Mollusk shells (clams, oysters) and foraminifera appear to give reliable results, although reworking and burrowing are potential problems. Analyses of museum specimens collected alive before atmospheric nuclear testing suggest that the standard reservoir correction for marine samples is appropriate for middle to lower Chesapeake Bay. The biogenic carbonate radiocarbon ages are compatible with 210Pb and 137Cs data and pollen stratigraphy from the same sites. Post-settlement changes in sediment transport and accumulation is an important environmental issue in many estuaries, including the Chesapeake. Our data show that large variations in sediment mass accumulation rates occur among sites. At shallow water sites, local factors seem to control changes in accumulation rates with time. Our two relatively deep-water sites in the axial channel of the bay have different long-term average accumulation rates, but the history of sediment accumulation at these sites appears to reflect overall conditions in the bay. Mass accumulation rates at the two deep-water sites rapidly increased by about fourfold coincident with widespread land clearance for agriculture in the Chesapeake watershed.

  7. Radiocarbon dating, chronologic framework, and changes in accumulation rates of holocene estuarine sediments from Chesapeake Bay

    USGS Publications Warehouse

    Colman, Steven M.; Baucom, P.C.; Bratton, J.F.; Cronin, T. M.; McGeehin, J.P.; Willard, D.; Zimmerman, A.R.; Vogt, P.R.

    2002-01-01

    Rapidly accumulating Holocene sediments in estuaries commonly are difficult to sample and date. In Chesapeake Bay, we obtained sediment cores as much as 20 m in length and used numerous radiocarbon ages measured by accelarator mass spectrometry methods to provide the first detailed chronologies of Holocene sediment accumulation in the bay. Carbon in these sediments is a complex mixture of materials from a variety of sources. Analyses of different components of the sediments show that total organic carbon ages are largely unreliable, because much of the carbon (including coal) has been transported to the bay from upstream sources and is older than sediments in which it was deposited. Mollusk shells (clams, oysters) and foraminifera appear to give reliable results, although reworking and burrowing are potential problems. Analyses of museum specimens collected alive before atmospheric nuclear testing suggest that the standard reservoir correction for marine samples is appropriate for middle to lower Chesapeake Bay. The biogenic carbonate radiocarbon ages are compatible with 210 Pb and 137 Cs data and pollen stratigraphy from the same sites. Post-settlement changes in sediment transport and accumulation is an important environmental issue in many estuaries, including the Chesapeake. Our data show that large variations in sediment mass accumulation rates occur among sites. At shallow water sites, local factors seem to control changes in accumulation rates with time. Our two relatively deep-water sites in the axial channel of the bay have different long-term average accumulation rates, but the history of sediment accumulation at these sites appears to reflect overall conditions in the bay. Mass accumulation rates at the two deep-water sites rapidly increased by about fourfold coincident with widespread land clearance for agriculture in the Chesapeake watershed.

  8. Amiodarone increases the accumulation of DEA in a human alveolar epithelium-derived cell line.

    PubMed

    Seki, Satoru; Itagaki, Shirou; Kobayashi, Masaki; Hirano, Takeshi; Iseki, Ken

    2008-07-01

    Amiodarone (AMD)-induced pulmonary toxicity (AIPT) is the most life-threatening side-effect of AMD treatment. N-Monodesethylamiodarone (DEA), an active metabolite of AMD, also exhibits cytotoxicity and tends to accumulate in the lung more intensively than AMD. In this study, we characterized the mechanism of DEA accumulation using A549 cells as a model of the alveolar epithelium. Typical ATP-depletion compounds caused an approximately 30% increase in the accumulation of DEA in A549 cells, although these effects were less than those in Caco-2 cells. Triiodothyronine (T(3)), which exhibited an inhibitory effect on DEA efflux in Caco-2 cells, did not affect the accumulation of DEA in A549 cells. On the other hand, 100 microM AMD caused an approximately 200% increase in DEA content in A549 cells, although AMD accumulation was not affected by 100 microM DEA. Since the reducing effect of AMD on cellular ATP levels and that of FCCP were similar, the mechanism by which DEA accumulation is increased by AMD might be different from the ATP-dependent DEA efflux mechanism. The decrease in cell viability by DEA in the presence of AMD (IC(50) value of DEA for A549 cell viability: 25.4+/-2.4 microM) was more pronounced than that by DEA alone (IC(50) value: 11.5+/-3.0 microM). This further DEA accumulation by AMD might be a factor responsible for the greater accumulation of DEA than that of AMD in the lung in long-term AMD-treated patients.

  9. Strain patterns and strain accumulation along plate margins

    NASA Technical Reports Server (NTRS)

    Savage, J. C.

    1978-01-01

    Observations of strain accumulation along plate margins in Japan, New Zealand, and the United States indicate that: (1) a typical maximum rate of secular strain accumulation is on the order of 0.3 ppm/a, (2) a substantial part of the strain accumulation process can be attributed to slip at depth on the major plate boundary faults, and (3) some plastic deformation in a zone 100 km or more in width is apparently involved in the strain accumulation process.

  10. 47 CFR 32.3410 - Accumulated amortization-capitalized leases.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 47 Telecommunication 2 2010-10-01 2010-10-01 false Accumulated amortization-capitalized leases. 32... Accounts § 32.3410 Accumulated amortization—capitalized leases. (a) This account shall include the accumulated amortization associated with the investment contained in Account 2681, Capital Leases. (b)...

  11. 26 CFR 1.263A-11 - Accumulated production expenditures.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 26 Internal Revenue 3 2011-04-01 2011-04-01 false Accumulated production expenditures. 1.263A-11... TAX (CONTINUED) INCOME TAXES (CONTINUED) Items Not Deductible § 1.263A-11 Accumulated production expenditures. (a) General rule. Accumulated production expenditures generally means the cumulative amount...

  12. 40 CFR 273.15 - Accumulation time limits.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... § 273.15 Accumulation time limits. (a) A small quantity handler of universal waste may accumulate... waste must be able to demonstrate the length of time that the universal waste has been accumulated from...; or (6) Any other method which clearly demonstrates the length of time that the universal waste...

  13. 40 CFR 273.35 - Accumulation time limits.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... § 273.35 Accumulation time limits. (a) A large quantity handler of universal waste may accumulate... demonstrate the length of time that the universal waste has been accumulated from the date it becomes a waste... other method which clearly demonstrates the length of time that the universal waste has been...

  14. 40 CFR 273.35 - Accumulation time limits.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... § 273.35 Accumulation time limits. (a) A large quantity handler of universal waste may accumulate... demonstrate the length of time that the universal waste has been accumulated from the date it becomes a waste... other method which clearly demonstrates the length of time that the universal waste has been...

  15. 47 CFR 32.3300 - Accumulated depreciation-nonoperating.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 47 Telecommunication 2 2010-10-01 2010-10-01 false Accumulated depreciation-nonoperating. 32.3300....3300 Accumulated depreciation—nonoperating. (a) This account shall include the accumulated amortization and depreciation associated with the investment contained in Account 2006, Nonoperating Plant....

  16. Geomycology. [fungal biosolubilization and accumulation of metals

    NASA Technical Reports Server (NTRS)

    Puerner, N. J.; Siegel, S. M.

    1976-01-01

    Fungi have long been known to have capabilities for reduction and alkylation of arsenate and selenate but their general capabilities for solubilizing and accumulating metallic substances have been given serious attention only in recent years. Common members of the Aspergillaceae cultured on boron, copper, lead and other metals or oxides can solubilize and concentrate the elements or their compounds. To account for biosolubilization of the metals, we have set up a model study, incubating selected metals, e.g., mercury, in solutions of various metabolites including L-lysine and citric acid. Results of 100-300 days incubation showed that many metals can in fact be readily solubilized, and in some cases more effectively at pH 6-7 than at pH 1.5-2.

  17. The accumulation of nickel in human lungs

    SciTech Connect

    Edelman, D.A.; Roggli, V.L. )

    1989-05-01

    Using data from published studies, lung concentrations of nickel were compare for persons with and without occupational exposure to nickel. As expected, the concentrations were much higher for persons with occupational exposure. To estimate the effects of nickel-containing tobacco smoke and nickel in the ambient air on the amount of nickel accumulated in lungs over time, a model was derived that took into account various variables related to the deposition of nickel in lungs. The model predicted nickel concentrations that were in the range of those of persons without known nickel exposure. Nickel is a suspected carcinogen and has been associated with an increased risk of respiratory tract cancer among nickel workers. However, before the nickel content of cigarettes can be implicated in the etiology of lung cancer, further studies are needed to evaluate the independent effects of smoking and exposure to nickel.

  18. Capsaicin accumulation in Capsicum spp. suspension cultures.

    PubMed

    Ochoa-Alejo, Neftalí

    2006-01-01

    Fruits of chili peppers (Capsicum spp.) specifically synthesize and accumulate a group of analogs known as capsaicinoids in the placenta tissues. These secondary metabolites are responsible for the hot taste of chili pepper fruits. Capsaicinoids are of economic importance because of their use in the food, cosmetic, military, and pharmaceutical industry. Several efforts have been focused to investigate the biosynthetic capacity of in vitro chili pepper cells and tissue cultures in order to determine the production feasibility of these compounds at the industrial level under controlled conditions. A description of techniques for the establishment of in vitro cultures of chili pepper, the addition of precursors and intermediates to the culture medium, and the selection of cell lines as a means to increase the production of capsaicinoids as well as the extraction, separation, and quantification of capsaicinoids from chili pepper cell cultures is reported in this chapter.

  19. Partial connectivity increases cultural accumulation within groups.

    PubMed

    Derex, Maxime; Boyd, Robert

    2016-03-15

    Complex technologies used in most human societies are beyond the inventive capacities of individuals. Instead, they result from a cumulative process in which innovations are gradually added to existing cultural traits across many generations. Recent work suggests that a population's ability to develop complex technologies is positively affected by its size and connectedness. Here, we present a simple computer-based experiment that compares the accumulation of innovations by fully and partially connected groups of the same size in a complex fitness landscape. We find that the propensity to learn from successful individuals drastically reduces cultural diversity within fully connected groups. In comparison, partially connected groups produce more diverse solutions, and this diversity allows them to develop complex solutions that are never produced in fully connected groups. These results suggest that explanations of ancestral patterns of cultural complexity may need to consider levels of population fragmentation and interaction patterns between partially isolated groups.

  20. Detection of radioactive accumulations within an incinerator

    SciTech Connect

    Schoenig, F.C. Jr.; Grossman, L.N.

    1986-03-25

    This patent describes an incinerator for burning combustible material contaminated by radiation. This incinerator has a combustion chamber having containment walls of high density refractory brick provided with at least one window opening through the high density refractory brick containment walls. The window consists of a low density body of ceramic fibers. Any radiation from residual radioactive ash within the incinerator containment and inhibited by the high density refractory brick can penetrate outward through the window of low density fiber to beyond the incinerator containment walls. A radiation detector is mounted outside the incinerator containment walls adjacent to the window of low density ceramic fiber for measuring any radiation passing out from the combustion chamber through the low density window. The amount of retained radioactive ash accumulated in the incinerator combustion chamber is indicated on the detector.

  1. The accumulation of nickel in human lungs.

    PubMed Central

    Edelman, D A; Roggli, V L

    1989-01-01

    Using data from published studies, lung concentrations of nickel were compare for persons with and without occupational exposure to nickel. As expected, the concentrations were much higher for persons with occupational exposure. To estimate the effects of nickel-containing tobacco smoke and nickel in the ambient air on the amount of nickel accumulated in lungs over time, a model was derived that took into account various variables related to the deposition of nickel in lungs. The model predicted nickel concentrations that were in the range of those of persons without known nickel exposure. Nickel is a suspected carcinogen and has been associated with an increased risk of respiratory tract cancer among nickel workers. However, before the nickel content of cigarettes can be implicated in the etiology of lung cancer, further studies are needed to evaluate the independent effects of smoking and exposure to nickel. PMID:2759060

  2. Partial connectivity increases cultural accumulation within groups

    PubMed Central

    Boyd, Robert

    2016-01-01

    Complex technologies used in most human societies are beyond the inventive capacities of individuals. Instead, they result from a cumulative process in which innovations are gradually added to existing cultural traits across many generations. Recent work suggests that a population’s ability to develop complex technologies is positively affected by its size and connectedness. Here, we present a simple computer-based experiment that compares the accumulation of innovations by fully and partially connected groups of the same size in a complex fitness landscape. We find that the propensity to learn from successful individuals drastically reduces cultural diversity within fully connected groups. In comparison, partially connected groups produce more diverse solutions, and this diversity allows them to develop complex solutions that are never produced in fully connected groups. These results suggest that explanations of ancestral patterns of cultural complexity may need to consider levels of population fragmentation and interaction patterns between partially isolated groups. PMID:26929364

  3. Fucoxanthin Suppresses Lipid Accumulation and ROS Production During Differentiation in 3T3-L1 Adipocytes.

    PubMed

    Seo, Min-Jung; Seo, Young-Jin; Pan, Cheol-Ho; Lee, Ok-Hwan; Kim, Kui-Jin; Lee, Boo-Yong

    2016-11-01

    Fucoxanthin, a pigment from the chloroplasts of marine brown algae, has a number of effects against obesity, diabetes, inflammation and cancer and provides cerebrovascular protection. In this study, we investigated the inhibitory effects of fucoxanthin on lipid accumulation and reactive oxygen species (ROS) production during adipogenesis. Treatment with fucoxanthin suppresses protein levels of the adipogenic transcription factors CCAAT/enhancer-binding protein alpha C/EBPα and peroxisome proliferator-activated receptor-γ and of their target protein, fatty acid binding protein 4. Lipogenesis-related enzymes, such as diglyceride acyltransferase 1 and lysophosphatidic acid acyltransferase-θ, were downregulated by fucoxanthin. The ROS-producing enzyme nicotinamide adenine dinucleotide phosphate (NADPH) oxidase 4 (NOX4) and the NADPH-generating enzyme glucose-6-phosphate dehydrogenase also decreased following fucoxanthin treatment. The adipokine adiponectin and the ROS-scavenging enzymes superoxide dismutase 2, glutathione reductase and catalase were dose-dependently increased by fucoxanthin. Furthermore, lipolysis-related enzymes and superoxide dismutase 1 were slightly decreased, because of the suppression of lipid-generating factors and the cytosolic enzyme NOX4. To confirm these results, we investigated lipid accumulation and ROS production in zebrafish, where fucoxanthin suppressed lipid and triglyceride accumulation, as well as ROS production. Our data suggest that fucoxanthin inhibits lipid accumulation and ROS production by controlling adipogenic and lipogenic factors and ROS-regulating enzymes. Copyright © 2016 John Wiley & Sons, Ltd.

  4. Silicone passive equilibrium samplers as 'chemometers' in eels and sediments of a Swedish lake.

    PubMed

    Jahnke, Annika; Mayer, Philipp; McLachlan, Michael S; Wickström, Håkan; Gilbert, Dorothea; MacLeod, Matthew

    2014-03-01

    Passive equilibrium samplers deployed in two or more media of a system and allowed to come to equilibrium can be viewed as 'chemometers' that reflect the difference in chemical activities of contaminants between the media. We applied silicone-based equilibrium samplers to measure relative chemical activities of seven 'indicator' polychlorinated biphenyls (PCBs) and hexachlorobenzene in eels and sediments from a Swedish lake. Chemical concentrations in eels and sediments were also measured using exhaustive extraction methods. Lipid-normalized concentrations in eels were higher than organic carbon-normalized concentrations in sediments, with biota-sediment accumulation factors (BSAFs) of five PCBs ranging from 2.7 to 12.7. In contrast, chemical activities of the same pollutants inferred by passive sampling were 3.5 to 31.3 times lower in eels than in sediments. The apparent contradiction between BSAFs and activity ratios is consistent with the sorptive capacity of lipids exceeding that of sediment organic carbon from this ecosystem by up to 50-fold. Factors that may contribute to the elevated activity in sediments are discussed, including slower response of sediments than water to reduced emissions, sediment diagenesis and sorption to phytoplankton. The 'chemometer' approach has the potential to become a powerful tool to study the thermodynamic controls on persistent organic chemicals in the environment and should be extended to other environmental compartments.

  5. Bromine accumulation in acidic black colluvial soils

    NASA Astrophysics Data System (ADS)

    Cortizas, Antonio Martínez; Vázquez, Cruz Ferro; Kaal, Joeri; Biester, Harald; Casais, Manuela Costa; Rodríguez, Teresa Taboada; Lado, Luis Rodríguez

    2016-02-01

    Recent investigations showed that bromine is incorporated to soil organic matter (SOM), its content increasing with humification. But few research was done on its long-term accumulation and the role played by pedogenetic processes, as those involved in organic matter stabilization. We investigated bromine content and distribution in four deep, acidic, organic-rich, Holocene soils from an oceanic area of Western Europe. Bromine concentrations (93-778 μg g-1) in the silt + clay (<50 μm) fraction were on average 3-times higher than those (17-250 μg g-1) in the fine earth (<2 mm), the former containing almost all bromine (90 ± 5%). Inventories were between 148 and 314 g m-2, indicating a rather large variability in a small area, and total estimated retention was low (6-16%). The degree of SOM bromination, expressed as the Br/C molar ratio, varied between 0.03 and 1.20 mmol Br/mol C. The ratio was highly correlated (n = 23, r2 0.88, p < 0.01) with the age of the SOM for the last ∼12 ka. Partial least squares modeling indicates that bromine concentration depends on the amount of organic matter stabilized as aluminium-OM associations, and to a lesser extent on soil acidity (pH) and iron-OM associations. Thus, at scales of thousands of years, bromine accumulation in acidic soils is linked to the pool of metal-clay-stabilized organic matter.

  6. Tipping news in information accumulation system

    NASA Astrophysics Data System (ADS)

    Shin, J. K.

    2010-05-01

    As a continuous opinion dynamics model, the information accumulation system (IAS) includes three basic mechanisms of the news, the inheritance and the diffusion as contributing to the information accumulation process of a system. A system is composed of agents who diffuse information through internal interaction, while each of them has incomplete memory or inheritance rate. The news comes from external sources of information, such as mass media. Previously the model IAS was studied only for the small news problems. In this study, a tipping news problem is considered. A key question of the problem is: what is the minimum strength of advertisement that can tip the minority opinion to a majority one? Dynamics of the IAS is briefly revisited with a special interest on nonlinear behavior of the model. In particular, it is shown that a discrete map of the IAS for a single color problem can be transformed into a logistic map, from which the dynamics of the IAS can be better understood. To show the applicability of the IAS model, the result is applied to explain the concept of the critical population size, which claims that there is a minimum population size for a social knowledge system to be continuously inherited without being lost. And critical size of the tipping news is found analytically in terms of IAS parameters. Some of the key results from the present study are compared in detail with the results from the Brownian particle model, which is believed to be the most similar model to the IAS. The concept of tipping news is used to show that a traditional society can tip at an exceptionally low inter-community exposure. Finally, the result was applied to the language competition problem.

  7. Copper accumulation by stickleback nests containing spiggin.

    PubMed

    Pinho, G L L; Martins, C M G; Barber, I

    2016-07-01

    The three-spined stickleback is a ubiquitous fish of marine, brackish and freshwater ecosystems across the Northern hemisphere that presents intermediate sensitivity to copper. Male sticklebacks display a range of elaborate reproductive behaviours that include nest construction. To build the nests, each male binds nesting material together using an endogenous glycoprotein nesting glue, known as 'spiggin'. Spiggin is a cysteine-rich protein and, therefore, potentially binds heavy metals present in the environment. The aim of this study was to investigate the capacity of stickleback nests to accumulate copper from environmental sources. Newly built nests, constructed by male fish from polyester threads in laboratory aquaria, were immersed in copper solutions ranging in concentration from 21.1-626.6 μg Cu L(-1). Bundles of polyester threads from aquaria without male fish were also immersed in the same copper solutions. After immersion, nests presented higher amounts of copper than the thread bundles, indicating a higher capacity of nests to bind this metal. A significant, positive correlation between the concentration of copper in the exposure solution and in the exposed nests was identified, but there was no such relationship for thread bundles. Since both spiggin synthesis and male courtship behaviour are under the control of circulating androgens, we predicted that males with high courtship scores would produce and secrete high levels of the spiggin protein. In the present study, nests built by high courtship score males accumulated more copper than those built by low courtship score males. Considering the potential of spiggin to bind metals, the positive relationship between fish courtship and spiggin secretion seems to explain the higher amount of copper on the nests from the fish showing high behaviour scores. Further work is now needed to determine the consequences of the copper binding potential of spiggin in stickleback nests for the health and survival of

  8. 40 CFR 94.220 - Service accumulation.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ...) CONTROL OF EMISSIONS FROM MARINE COMPRESSION-IGNITION ENGINES Certification Provisions § 94.220 Service... levels and deterioration factors may be projected from durability data engines which have completed...

  9. 40 CFR 94.220 - Service accumulation.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ...) CONTROL OF EMISSIONS FROM MARINE COMPRESSION-IGNITION ENGINES Certification Provisions § 94.220 Service... levels and deterioration factors may be projected from durability data engines which have completed...

  10. 40 CFR 94.220 - Service accumulation.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ...) CONTROL OF EMISSIONS FROM MARINE COMPRESSION-IGNITION ENGINES Certification Provisions § 94.220 Service... levels and deterioration factors may be projected from durability data engines which have completed...

  11. 40 CFR 94.220 - Service accumulation.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ...) CONTROL OF EMISSIONS FROM MARINE COMPRESSION-IGNITION ENGINES Certification Provisions § 94.220 Service... levels and deterioration factors may be projected from durability data engines which have completed...

  12. Effect of cigarette smoking on copper, lead, and cadmium accumulation in human lens

    PubMed Central

    Cekic, O.

    1998-01-01

    AIM—To identify cigarette smoking as a risk factor for development of cataract, to determine the importance of copper, lead, and cadmium in cataractogenesis, and to learn about any relation between those elements.
METHODS—Copper, lead, and cadmium concentrations were measured by atomic absorption spectrophotometry in 37 cataractous and nine normal human lenses.
RESULTS—All three element accumulations in lenses with cataract were statistically meaningful. Lenticular copper, lead, and cadmium were increased significantly with cigarette smoking. Cadmium had a positive correlation both with lead and copper in cataractous lenses.
CONCLUSION—The accumulation of copper, lead, and cadmium occurs in cataract. The probable source of cadmium in humans is cigarettes. Lenticular cadmium accumulation also increases copper and lead precipitation in the lens. Cigarette smoking might be cataractogenic.

 Keywords: cigarettes; cataract; copper; lead; cadmium PMID:9613387

  13. Carbohydrate accumulation may be the proximate trigger of anthocyanin biosynthesis under autumn conditions in Begonia semperflorens.

    PubMed

    Zhang, K M; Li, Z; Li, Y; Li, Y H; Kong, D Z; Wu, R H

    2013-11-01

    Many plant leaves appear red in the autumn, and many papers have focused on the environmental factors and role of anthocyanin in this process. However few papers have examined the substances that are induced during this process. We hypothesised that excess sugar accumulation directly induces anthocyanin accumulation under autumn conditions. Using two methods (restricting phloem movement and exogenous sucrose feeding), we found that both surplus photosynthate and exogenous sucrose could induce anthocyanin biosynthesis, corresponding to up-regulation of several enzymes involved in anthocyanin biosynthesis (phenylalanine ammonia lyase, chalcone isomerase, dihydroflavonol 4-reductase and flavonoid 3-O-glucosyl transferase) and in transport (glutathione S-transferase). Our results suggest that excess carbohydrate may be the proximate trigger for induction of anthocyanin biosynthesis in autumn, but only when carbohydrates are accumulated for storage.

  14. Comparison of metal accumulation in the azooxanthellate scleractinian coral (Tubastraea coccinea) from different polluted environments.

    PubMed

    Chan, Isani; Hung, Jia-Jang; Peng, Shao-Hung; Tseng, Li-Chun; Ho, Tung-Yuan; Hwang, Jiang-Shiou

    2014-08-30

    The response of metal accumulation in coral Tubastraea coccinea to various degrees of metal enrichment was investigated from the Yin-Yang Sea (YYS) receiving abandoned mining effluents, the Kueishan Islet (KI) hydrothermal vent field, and the nearshore area of remoted Green Island (GI). The concentrations of most dissolved metals were highest in seawater at YYS, followed by KI, and then GI, showing the effects of anthropogenic and venting inputs on metal levels. Five metals (Co, Fe, Mn, Ni, and Zn) yielded significant differences (p<0.05) among the skeleton samples. We identified similar patterns in the metal-Ca ratios, indicating that the elevated metals in skeletons was a consequence of external inputs. The coral tissues were relatively sensitive in monitoring metal accumulation, showing significant differences among three locations for Cd, Co, Cu, Fe, Pb, Ni, and Zn. Specific bioconcentration factors provided strong support for the differential metal accumulation in skeletons and tissues.

  15. Topographic control and accumulation rate of some Holocene coral reefs: south Florida and Dry Tortugas

    USGS Publications Warehouse

    Shinn, E.A.; Hudson, J.H.; Halley, R.B.; Lidz, B.H.; Taylor, D.L.

    1977-01-01

    Core drilling and examination of underwater excavation on 6 reef sites in south Florida and Dry Tortugas revealed that underlying topography is the major factor controlling reef morphology. Carbon-14 dating on coral recovered from cores enables calculation of accumulation rates. Accumulation rates were found to range from 0.38 m/1000 years in thin Holocene reefs to as much as 4.85 m/1000 years in thicker buildups. Cementation and alteration of corals were found to be more pronounced in areas of low buildup rates than in areas of rapid accumulation rates. Acropora palmata, generally considered the major reef builder in Florida, was found to be absent in most reefs drilled. At Dry Tortugas, the more than 13-meter thick Holocene reef did not contain A. palmata. The principal reef builders in this outer reef are the same as those which built the Pleistocene Key Largo formation, long considered to be fossilized patch reef complex.

  16. Field study comparing the effect of hydraulic mixing on septic tank performance and sludge accumulation.

    PubMed

    Almomani, Fares

    2016-01-01

    This study investigates the effect of hydraulic mixing on anaerobic digestion and sludge accumulation in a septic tank. The performance of a septic tank equipped with a hydraulic mixer was compared with that of a similar standard septic tank over a period of 10 months. The study was conducted in two phases: Phase-I--from May to November 2013 (6 months); Phase-II--from January to May 2014 (4 months). Hydraulic mixing effectively reduced the effluent biological oxygen demand (BOD) and total suspended solids, and reduced the sludge accumulation rate in the septic tank. The BOD removal efficiencies during Phase-II were 65% and 75% in the standard septic tank and a septic tank equipped with hydraulic mixer (Smart Digester™), respectively. The effect of hydraulic mixing reduced the rate of sludge accumulation from 0.64 cm/day to 0.27 cm/day, and increased the pump-out interval by a factor of 3.

  17. Accumulation and diagenesis of chlorinated hydrocarbons in lacustrine sediments

    USGS Publications Warehouse

    Elsenreich, S.J.; Capel, P.D.; Robbins, J.A.; Bourbonniere, R.

    1989-01-01

    Two sediment cores were taken from the Rochester Basin of eastern Lake Ontario and analyzed for the radionuclides 210Pb and 137Cs and several high molecular weight chlorinated hydrocarbons (CHs). The two sites are geographically proximate but differ in sedimentation rate, permitting sedimentation-dependent processes to be factored out. The 210Pb chronology showed a mixed depth of 3-5 cm and an intrinsic time resolution of 11-14 years. Vertically integrated numbers of deposit-feeding oligochaete worms and burrowing organisms are insufficient to homogenize the sediment on the time scale of CH inputs, which are non steady state. U.S. production and sales of polychlorinated biphenyls (PCBs), DDT, Mirex, and hexachlorobenzene (HCB), as determinants of the shape of the input function, adequately predict the overall shape and, in many cases, details in the sedimentary profile. Sediment focusing factors (FF) inferred from 137Cs and 210Pb inventories averaged 1.17 and 1.74 for cores E-30 and G-32, respectively. This permitted CH accumulation rates to be corrected for focusing. Apparent molecular diffusion coefficients modeled for many of the CHs were about (1-3) ?? 10-9 cm2/s.

  18. Accumulation of metal ions by pectinates

    NASA Astrophysics Data System (ADS)

    Deiana, S.; Deiana, L.; Palma, A.; Premoli, A.; Senette, C.

    2009-04-01

    The knowledge of the mechanisms which regulate the interactions of metal ions with partially methyl esterified linear polymers of α-1,4 linked D-galacturonic acid units (pectinates), well represented in the root inner and outer apoplasm, is of great relevance to understand the processes which control their accumulation at the soil-root interface as well as their mobilization by plant metabolites. Accumulation of a metal by pectinates can be affected by the presence of other metals so that competition or distribution could be expected depending on the similar or different affinity of the metal ions towards the binding sites, mainly represented by the carboxylate groups. In order to better understand the mechanism of accumulation in the apoplasm of several metal ions, the sorption of Cd(II), Zn(II), Cu(II), Pb(II) and Cr(III) by a Ca-polygalacturonate gel, used as model of the soil-root interface, with a degree of esterification of 18% (PGAE1) and 65% (PGAE2) was studied at pH 3.0, 4.0, 5.0 and 6.0 in the presence of CaCl2 2.5 mM.. The results show that sorption increases with increasing both the initial metal concentration and pH. A similar sorption trend was evidenced for Cu(II) and Pb(II) and for Zn(II) and Cd(II), indicating that the mechanism of sorption for these two ionic couples is quite different. As an example, at pH 6.0 and an initial metal concentration equal to 2.0 mM, the amount of Cu(II) and Pb(II) sorbed was about 1.98 mg-1 of PGAE1 while that of Cd(II) and Zn(II) was about 1.2 mg-1. Cr(III) showed a rather different sorption trend and a much higher amount (2.8 mg-1of PGAE1 at pH 6.0) was recorded. The higher affinity of Cr(III) for the polysaccharidic matrix is attributable to the formation of Cr(III) polynuclear species in solution, as shown by the distribution diagrams obtained through the MEDUSA software. On the basis of these findings, the following affinity towards the PGAE1 can be assessed: Cr(III) > Cu(II) ? Pb(II) > Zn (II) ? Cd

  19. Effects of exercise accumulation on plasma lipids and lipoproteins.

    PubMed

    Wagganer, Jason D; Robison, Charles E; Ackerman, Terry A; Davis, Paul G

    2015-05-01

    Debate exists as to whether improvements in some cardiometabolic risk factors following exercise training result more from the last session of, or from an accumulation of, exercise sessions. This study was designed to compare the effect of a single exercise session with 3 consecutive days of exercise on triglyceride (TG), high-density lipoprotein-cholesterol (HDL-C), and low-density lipoprotein-cholesterol (LDL-C). Twelve young adult (aged 22.5±2.5 years), overweight (body mass index=29.7±4 kg·m(-2)), sedentary, black (n=5) and white (n=7) men (n=6) and women (n=6) completed, in random order, a single treadmill exercise session at 60% maximal oxygen uptake for 90 min (1EX), accumulated exercise sessions (same as for 1EX) for 3 consecutive days (3EX), and a control protocol (no exercise for 6 days). Plasma samples were collected from baseline through 24, 48, and 72 h postexercise. Significant treatment-by-time interactions (p<0.05) existed in HDL-C and LDL-C. Postexercise responses of HDL-C differed at 48 h (1EX: -3.6, 3EX: +3.7 mg·dL(-1)) and 72 h (1EX: -1.7, 3EX: +3.2 mg·dL(-1)). LDL-C responses differed at 48 h (1EX: -16, 3EX: +6 mg·dL(-1)). Although not statistically significant, TG concentrations decreased by 29% at 24 h after 3EX, compared with -7% after 1EX. An inverse relationship between baseline and postexercise reduction in TG was present with 3EX (r=-0.655; p<0.05). In conclusion, 3EX increased HDL-C and decreased TG more than 1EX, while the decrease in LDL-C after 1EX was suppressed. Blood lipid panel changes may be due to more accumulated effects over time rather than just a result of the most recent exercise session.

  20. Cadmium effects and accumulation in cultures of Prorocentrum micans (dinophyta)

    NASA Astrophysics Data System (ADS)

    Kayser, H.; Sperling, K.-R.

    1980-03-01

    Effects and accumulation of cadmium were studied in unialgal 10-1 batch-culture experiments with the dinoflagellate Prorocentrum micans Ehrenberg. Tests were made using sterile filtered North Sea water enriched with nitrate and phosphate only in order to avoid disturbances by complex formation. Cadmium was added to the cultures in amounts of 100 to 0.13 µg l-1. In one series it was added at the start of the experiments and in a second one after a growth period of 1 week. Addition of only 1.2 µg Cd l-1 reduces multiplication rates and maximum cell densities of the algae. Not until 0.4 µg Cd-1 does growth correspond to that of the controls. Cadmium concentrations were measured, after filtration, in the culture medium and in the biomass by means of flameless AAS. The cadmium content in algae increased from 2.7 µg g-1 (dry weight) in controls to 500 µg g-1 (dry weight) in media containing 100 µg Cd l-1. Uptake occurred rapidly during the first few days of the experiments, slowed down somewhat during exponential growth stage, and increased during decay of the cultures. Cadmium content of culture media remained nearly constant (Series 1) or decreased only slowly during experimental time (Series 2). The highest concentration factor was measured in the controls. It decreased with increasing metal concentration in the medium and increased with experimental time. Structural modifications of the cells were visible after Lugol fixation only, indicating brittleness of the cell walls. P. micans has shown to be extremely sensitive to cadmium and to accumulate this metal.

  1. Manipulating RuBisCO accumulation in the green alga, Chlamydomonas reinhardtii.

    PubMed

    Johnson, Xenie

    2011-07-01

    The nuclear factor, Maturation/stability of RbcL (MRL1), regulates the accumulation of the chloroplast rbcL gene transcript in Chlamydomonas reinhardtii by stabilising the mRNA via its 5' UTR. An absence of MRL1 in algal mrl1 mutants leads to a complete absence of RuBisCO large subunit protein and thus a lack of accumulation of the RuBisCO holoenzyme. By complementing mrl1 mutants by random transformation of the nuclear genome with the MRL1 cDNA, different levels of rbcL transcript accumulate. We also observe that RuBisCO Large Subunit accumulation is perturbed. Complemented strains accumulating as little as 15% RuBisCO protein can grow phototrophically while RuBisCO in this range is limiting for phototrophic growth. We also observe that photosynthetic activity, here measured by the quantum yield of PSII, appears to be a determinant for phototrophic growth. In some strains that accumulate less RuBisCO, a strong production of reactive oxygen species is detected. In the absence of RuBisCO, oxygen possibly acts as the PSI terminal electron acceptor. These results show that random transformation of MRL1 into mrl1 mutants can change RuBisCO accumulation allowing a range of phototrophic growth phenotypes. Furthermore, this technique allows for the isolation of strains with low RuBisCO, within the range of acceptable photosynthetic growth and reasonably low ROS production. MRL1 is thus a potential tool for applications to divert electrons away from photosynthetic carbon metabolism towards alternative pathways.

  2. Relationships Between Photosynthetic Activity and Silica Accumulation with Ages of Leaf in Sasa veitchii (Poaceae, Bambusoideae)

    PubMed Central

    Motomura, Hiroyuki; Hikosaka, Kouki; Suzuki, Mitsuo

    2008-01-01

    Background and Aims Bamboos have long-lived, evergreen leaves that continue to accumulate silica throughout their life. Silica accumulation has been suggested to suppress their photosynthetic activity. However, nitrogen content per unit leaf area (Narea), an important determinant of maximum photosynthetic capacity per unit leaf area (Pmax), decreases as leaves age and senescence. In many species, Pmax decreases in parallel with the leaf nitrogen content. It is hypothesized that if silica accumulation affects photosynthesis, then Pmax would decrease faster than Narea, leading to a decrease in photosynthetic rate per unit leaf nitrogen (photosynthetic nitrogen use efficiency, PNUE) with increasing silica content in leaves. Methods The hypothesis was tested in leaves of Sasa veitchii, which have a life span of 2 years and accumulate silica up to 41 % of dry mass. Seasonal changes in Pmax, stomatal conductance, Narea and silica content were measured for leaves of different ages. Key Results Although Pmax and PNUE were negatively related with silica content across leaves of different ages, the relationship between PNUE and silica differed depending on leaf age. In second-year leaves, PNUE was almost constant although there was a large increase in silica content, suggesting that leaf nitrogen was a primary factor determining the variation in Pmax and that silica accumulation did not affect photosynthesis. PNUE was strongly and negatively correlated with silica content in third-year leaves, suggesting that silica accumulation affected photosynthesis of older leaves. Conclusions Silica accumulation in long-lived leaves of bamboo did not affect photosynthesis when the silica concentration of a leaf was less than 25 % of dry mass. Silica may be actively transported to epidermal cells rather than chlorenchyma cells, avoiding inhibition of CO2 diffusion from the intercellular space to chloroplasts. However, in older leaves with a larger silica content, silica was also

  3. Heavy metal accumulation by periphyton is related to eutrophication in the Hai River Basin, Northern China.

    PubMed

    Tang, Wenzhong; Cui, Jingguo; Shan, Baoqing; Wang, Chao; Zhang, Wenqiang

    2014-01-01

    The Hai River Basin (HRB) is one of the most polluted river basins in China. The basin suffers from various types of pollutants including heavy metals and nutrients due to a high population density and rapid economic development in this area. We assessed the relationship between heavy metal accumulation by periphyton playing an important role in fluvial food webs and eutrophication in the HRB. The concentrations of the unicellular diatoms (type A), filamentous algae with diatoms (type B), and filamentous algae (type C) varied along the river, with type A dominating upstream, and types B then C increasing in concentration further downstream, and this was consistent with changes in the trophic status of the river. The mean heavy metal concentrations in the type A, B and C organisms were Cr: 18, 18 and 24 mg/kg, respectively, Ni: 9.2, 10 and 12 mg/kg, respectively, Cu: 8.4, 19 and 29 mg/kg, respectively, and Pb: 11, 9.8 and 7.1 mg/kg respectively. The bioconcentration factors showed that the abilities of the organisms to accumulate Cr, Ni and Pb decreased in the order type A, type B, then type C, but their abilities to accumulate Cu increased in that order. The Ni concentration was a good predictor of Cr, Cu and Pb accumulation by all three periphyton types. Our study shows that heavy metal accumulation by periphyton is associated with eutrophication in the rivers in the HRB.

  4. Engineering of the rose flavonoid biosynthetic pathway successfully generated blue-hued flowers accumulating delphinidin.

    PubMed

    Katsumoto, Yukihisa; Fukuchi-Mizutani, Masako; Fukui, Yuko; Brugliera, Filippa; Holton, Timothy A; Karan, Mirko; Nakamura, Noriko; Yonekura-Sakakibara, Keiko; Togami, Junichi; Pigeaire, Alix; Tao, Guo-Qing; Nehra, Narender S; Lu, Chin-Yi; Dyson, Barry K; Tsuda, Shinzo; Ashikari, Toshihiko; Kusumi, Takaaki; Mason, John G; Tanaka, Yoshikazu

    2007-11-01

    Flower color is mainly determined by anthocyanins. Rosa hybrida lacks violet to blue flower varieties due to the absence of delphinidin-based anthocyanins, usually the major constituents of violet and blue flowers, because roses do not possess flavonoid 3',5'-hydoxylase (F3'5'H), a key enzyme for delphinidin biosynthesis. Other factors such as the presence of co-pigments and the vacuolar pH also affect flower color. We analyzed the flavonoid composition of hundreds of rose cultivars and measured the pH of their petal juice in order to select hosts of genetic transformation that would be suitable for the exclusive accumulation of delphinidin and the resulting color change toward blue. Expression of the viola F3'5'H gene in some of the selected cultivars resulted in the accumulation of a high percentage of delphinidin (up to 95%) and a novel bluish flower color. For more exclusive and dominant accumulation of delphinidin irrespective of the hosts, we down-regulated the endogenous dihydroflavonol 4-reductase (DFR) gene and overexpressed the Irisxhollandica DFR gene in addition to the viola F3'5'H gene in a rose cultivar. The resultant roses exclusively accumulated delphinidin in the petals, and the flowers had blue hues not achieved by hybridization breeding. Moreover, the ability for exclusive accumulation of delphinidin was inherited by the next generations.

  5. Heavy Metal Accumulation by Periphyton Is Related to Eutrophication in the Hai River Basin, Northern China

    PubMed Central

    Tang, Wenzhong; Cui, Jingguo; Shan, Baoqing; Wang, Chao; Zhang, Wenqiang

    2014-01-01

    The Hai River Basin (HRB) is one of the most polluted river basins in China. The basin suffers from various types of pollutants including heavy metals and nutrients due to a high population density and rapid economic development in this area. We assessed the relationship between heavy metal accumulation by periphyton playing an important role in fluvial food webs and eutrophication in the HRB. The concentrations of the unicellular diatoms (type A), filamentous algae with diatoms (type B), and filamentous algae (type C) varied along the river, with type A dominating upstream, and types B then C increasing in concentration further downstream, and this was consistent with changes in the trophic status of the river. The mean heavy metal concentrations in the type A, B and C organisms were Cr: 18, 18 and 24 mg/kg, respectively, Ni: 9.2, 10 and 12 mg/kg, respectively, Cu: 8.4, 19 and 29 mg/kg, respectively, and Pb: 11, 9.8 and 7.1 mg/kg respectively. The bioconcentration factors showed that the abilities of the organisms to accumulate Cr, Ni and Pb decreased in the order type A, type B, then type C, but their abilities to accumulate Cu increased in that order. The Ni concentration was a good predictor of Cr, Cu and Pb accumulation by all three periphyton types. Our study shows that heavy metal accumulation by periphyton is associated with eutrophication in the rivers in the HRB. PMID:24482681

  6. Actions and interactions of temperature and photoperiod on mercury accumulation by Elodea densa from sediment source

    SciTech Connect

    Maury-Brachet, R.; Ribeyre, F.; Boudou, A. )

    1990-10-01

    Actions and interactions of two abiotic parameters--temperature (18, 21, and 24 degrees C) and photoperiod (8, 12, and 16 hr/day)--on mercury bioaccumulation (HgCl2 and CH3HgCl) by a rooted macrophyte species, Elodea densa, from the sediment source were studied using experimental designs. Comparative analysis of shoot growth (weight and length criteria) was made to look for a possible inhibiting action by the metal and to establish quantitative data for the interpretation of accumulation results. Total mercury accumulation by E. densa was quantified using two criteria--concentration and content. The amount of total mercury accumulated in the whole plant after a 28-day exposure was 40 times greater for the organic form, if the two compounds were initially added to the sediment at the same concentration. Temperature and photoperiod had a strong influence on methyl mercury accumulation by the plants, separately and in interaction. The interactions generally represent an amplification of effects produced by each abiotic factor, although this synergy varied according to the two accumulation criteria being considered or to the level of analysis (whole plant, leaves, and stems).

  7. Ion Accumulation and Migration Effects on Redox Cycling in Nanopore Electrode Arrays at Low Ionic Strength.

    PubMed

    Ma, Chaoxiong; Xu, Wei; Wichert, William R A; Bohn, Paul W

    2016-03-22

    Ion permselectivity can lead to accumulation in zero-dimensional nanopores, producing a significant increase in ion concentration, an effect which may be combined with unscreened ion migration to improve sensitivity in electrochemical measurements, as demonstrated by the enormous current amplification (∼2000-fold) previously observed in nanopore electrode arrays (NEA) in the absence of supporting electrolyte. Ionic strength is a key experimental factor that governs the magnitude of the additional current amplification (AFad) beyond simple redox cycling through both ion accumulation and ion migration effects. Separate contributions from ion accumulation and ion migration to the overall AFad were identified by studying NEAs with varying geometries, with larger AFad values being achieved in NEAs with smaller pores. In addition, larger AFad values were observed for Ru(NH3)6(3/2+) than for ferrocenium/ferrocene (Fc(+)/Fc) in aqueous solution, indicating that coupling efficiency in redox cycling can significantly affect AFad. While charged species are required to observe migration effects or ion accumulation, poising the top electrode at an oxidizing potential converts neutral species to cations, which can then exhibit current amplification similar to starting with the cation. The electrical double layer effect was also demonstrated for Fc/Fc(+) in acetonitrile and 1,2-dichloroethane, producing AFad up to 100× at low ionic strength. The pronounced AFad effects demonstrate the advantage of coupling redox cycling with ion accumulation and migration effects for ultrasensitive electrochemical measurements.

  8. Radar detection of surface oil accumulations

    NASA Technical Reports Server (NTRS)

    Estes, J. E.; Oneill, P.; Wilson, M.

    1980-01-01

    The United States Coast Guard is developing AIREYE, an all weather, day/night airborne surveillance system, for installation aboard future medium range surveillance aircraft. As part of this program, a series of controlled tests were conducted off southern California to evaluate the oil slick detection capabilities of two Motorola developed, side looking radars. The systems, a real aperture AN/APS-94D and a synthetic aperture coherent on receive (COR) were flown over the Santa Barbara Channel on May 19, 1976. Targets imaged during the coincident overflights included natural oil seepage, simulated oil spills, oil production platforms, piers, mooring buoys, commercial boats and barges at other targets. Based on an analysis of imagery from the coincident radar runs, COR provides better detection of natural and man made oil slicks, whereas the AN/APS-94D consistently exhibited higher surface target detection results. This and other tests have shown that active microwave systems have considerable potential for aiding in the detection and analysis of surface oil accumulations.

  9. Significant silicon accumulation by marine picocyanobacteria

    NASA Astrophysics Data System (ADS)

    Baines, Stephen B.; Twining, Benjamin S.; Brzezinski, Mark A.; Krause, Jeffrey W.; Vogt, Stefan; Assael, Dylan; McDaniel, Hannah

    2012-12-01

    The marine silicon cycle is thought to be intimately tied to the carbon cycle through its effect on the growth of diatoms. These unicellular algae form substantial blooms in cold, nutrient-rich waters. Their dense, siliceous cell walls promote the sinking of particulate matter, and all the carbon and nutrients contained therein. As such, diatoms are thought to be the primary organisms responsible for the low levels of dissolved silicon observed in the surface ocean and the export of mineral silica to depth. Here, we use synchrotron X-ray fluorescence microscopy to determine the elemental composition of individual diatoms and cyanobacterial cells from the eastern equatorial Pacific and the Sargasso Sea. We show that cells of Synechococcus, a small unicellular marine cyanobacterium that dominates in nutrient-depleted waters, can exhibit cellular ratios of silicon to sulphur, and silicon to phosphorus, approaching those detected in diatoms in the same location. Silicon accumulation was also observed in cultured Synechococcus strains. We estimate that the water column inventory of silicon in Synechococcus can exceed that of diatoms in some cases. We suggest that picocyanobacteria may exert a previously unrecognized influence on the oceanic silicon cycle, especially in nutrient-poor waters.

  10. Truncation and Accumulated Errors in Wave Propagation

    NASA Astrophysics Data System (ADS)

    Chiang, Yi-Ling F.

    1988-12-01

    The approximation of the truncation and accumulated errors in the numerical solution of a linear initial-valued partial differential equation problem can be established by using a semidiscretized scheme. This error approximation is observed as a lower bound to the errors of a finite difference scheme. By introducing a modified von Neumann solution, this error approximation is applicable to problems with variable coefficients. To seek an in-depth understanding of this newly established error approximation, numerical experiments were performed to solve the hyperbolic equation {∂U}/{∂t} = -C 1(x)C 2(t) {∂U}/{∂x}, with both continuous and discontinuous initial conditions. We studied three cases: (1) C1( x)= C0 and C2( t)=1; (2) C1( x)= C0 and C2( t= t; and (3) C 1(x)=1+( {solx}/{a}) 2 and C2( t)= C0. Our results show that the errors are problem dependent and are functions of the propagating wave speed. This suggests a need to derive problem-oriented schemes rather than the equation-oriented schemes as is commonly done. Furthermore, in a wave-propagation problem, measurement of the error by the maximum norm is not particularly informative when the wave speed is incorrect.

  11. Real-Time Accumulative Computation Motion Detectors

    PubMed Central

    Fernández-Caballero, Antonio; López, María Teresa; Castillo, José Carlos; Maldonado-Bascón, Saturnino

    2009-01-01

    The neurally inspired accumulative computation (AC) method and its application to motion detection have been introduced in the past years. This paper revisits the fact that many researchers have explored the relationship between neural networks and finite state machines. Indeed, finite state machines constitute the best characterized computational model, whereas artificial neural networks have become a very successful tool for modeling and problem solving. The article shows how to reach real-time performance after using a model described as a finite state machine. This paper introduces two steps towards that direction: (a) A simplification of the general AC method is performed by formally transforming it into a finite state machine. (b) A hardware implementation in FPGA of such a designed AC module, as well as an 8-AC motion detector, providing promising performance results. We also offer two case studies of the use of AC motion detectors in surveillance applications, namely infrared-based people segmentation and color-based people tracking, respectively. PMID:22303161

  12. Topically applied ceramide accumulates in skin glyphs

    PubMed Central

    Zhang, Qihong; Flach, Carol R; Mendelsohn, Richard; Mao, Guangru; Pappas, Apostolos; Mack, M Catherine; Walters, Russel M; Southall, Michael D

    2015-01-01

    Ceramides (CERs), structural components of the stratum corneum (SC), impart essential barrier properties to this thin outer layer of the epidermis. Variations in CER species within this layer have been linked to several skin diseases. A recent proliferation of CER-containing topical skin-care products warrants the elucidation of CER penetration profiles in both healthy and diseased skin. In the current study, the spatial distributions of CER concentration profiles, following topical application of two species of CER, were tracked using infrared imaging. Suspensions of single-chain perdeuterated sphingosine and phytosphingosine CER in oleic acid were applied, in separate experiments, to the surface of healthy intact ex vivo human skin using Franz diffusion cells. Following either a 24- or 48-hour incubation period at 34°C, infrared images were acquired from microtomed skin sections. Both CER species accumulated in glyph regions of the skin and penetrated into the SC, to a limited extent, only in these regions. The concentration profiles observed herein were independent of the CER species and incubation time utilized in the study. As a result, a very heterogeneous, sparse, spatial distribution of CERs in the SC was revealed. In contrast, oleic acid was found to be fairly homogeneously distributed throughout the SC and viable epidermis, albeit at lower concentrations in the latter. A more uniform, lateral distribution of CERs in the SC would likely be important for barrier efficacy or enhancement. PMID:26170709

  13. Algal swimming velocities signal fatty acid accumulation.

    PubMed

    Hansen, Travis J; Hondzo, Miki; Mashek, Mara T; Mashek, Douglas G; Lefebvre, Paul A

    2013-01-01

    The use of microalgae for biofuel production will be beneficial to society if we can produce biofuels at large scales with minimal mechanical energy input in the production process. Understanding micro-algal physiological responses under variable environmental conditions in bioreactors is essential for the optimization of biofuel production. We demonstrate that measuring micro-algal swimming speed provides information on culture health and total fatty acid accumulation. Three strains of Chlamydomonas reinhardtii were grown heterotrophically on acetate and subjected to various levels of nitrogen starvation. Other nutrient levels were explored to determine their effect on micro-algal kinetics. Swimming velocities were measured with two-dimensional micro-particle tracking velocimetry. The results show an inverse linear relationship between normalized total fatty acid mass versus swimming speed of micro-algal cells. Analysis of RNA sequencing data confirms these results by demonstrating that the biological processes of cell motion and the generation of energy precursors are significantly down-regulated. Experiments demonstrate that changes in nutrient concentration in the surrounding media also affect swimming speed. The findings have the potential for the in situ and indirect assessment of lipid content by measuring micro-algal swimming kinetics.

  14. Vinpocetine attenuates lipid accumulation and atherosclerosis formation

    SciTech Connect

    Cai, Yujun; Li, Jian-Dong; Yan, Chen

    2013-05-10

    Highlights: •Vinpocetine attenuates hyperlipidemia-induced atherosclerosis in a mouse model. •Vinpocetine antagonizes ox-LDL uptake and accumulation in macrophages. •Vinpocetine blocks the induction of ox-LDL receptor LOX-1 in vitro and in vivo. -- Abstract: Atherosclerosis, the major cause of myocardial infarction and stroke, is a chronic arterial disease characterized by lipid deposition and inflammation in the vessel wall. Cholesterol, in low-density lipoprotein (LDL), plays a critical role in the pathogenesis of atherosclerosis. Vinpocetine, a derivative of the alkaloid vincamine, has long been used as a cerebral blood flow enhancer for treating cognitive impairment. Recent study indicated that vinpocetine is a potent anti-inflammatory agent. However, its role in the pathogenesis of atherosclerosis remains unexplored. In the present study, we show that vinpocetine significantly reduced atherosclerotic lesion formation in ApoE knockout mice fed with a high-fat diet. In cultured murine macrophage RAW264.7 cells, vinpocetine markedly attenuated oxidized LDL (ox-LDL) uptake and foam cell formation. Moreover, vinpocetine greatly blocked the induction of ox-LDL receptor 1 (LOX-1) in cultured macrophages as well as in the LOX-1 level in atherosclerotic lesions. Taken together, our data reveal a novel role of vinpocetine in reduction of pathogenesis of atherosclerosis, at least partially through suppressing LOX-1 signaling pathway. Given the excellent safety profile of vinpocetine, this study suggests vinpocetine may be a therapeutic candidate for treating atherosclerosis.

  15. Bilirubin Binding to PPARα Inhibits Lipid Accumulation

    PubMed Central

    Stec, David E.; John, Kezia; Trabbic, Christopher J.; Luniwal, Amarjit; Hankins, Michael W.; Baum, Justin

    2016-01-01

    Numerous clinical and population studies have demonstrated that increased serum bilirubin levels protect against cardiovascular and metabolic diseases such as obesity and diabetes. Bilirubin is a potent antioxidant, and the beneficial actions of moderate increases in plasma bilirubin have been thought to be due to the antioxidant effects of this bile pigment. In the present study, we found that bilirubin has a new function as a ligand for PPARα. We show that bilirubin can bind directly to PPARα and increase transcriptional activity. When we compared biliverdin, the precursor to bilirubin, on PPARα transcriptional activation to known PPARα ligands, WY 14,643 and fenofibrate, it showed that fenofibrate and biliverdin have similar activation properties. Treatment of 3T3-L1 adipocytes with biliverdin suppressed lipid accumulation and upregulated PPARα target genes. We treated wild-type and PPARα KO mice on a high fat diet with fenofibrate or bilirubin for seven days and found that both signal through PPARα dependent mechanisms. Furthermore, the effect of bilirubin on lowering glucose and reducing body fat percentage was blunted in PPARα KO mice. These data demonstrate a new function for bilirubin as an agonist of PPARα, which mediates the protection from adiposity afforded by moderate increases in bilirubin. PMID:27071062

  16. Bilirubin Binding to PPARα Inhibits Lipid Accumulation.

    PubMed

    Stec, David E; John, Kezia; Trabbic, Christopher J; Luniwal, Amarjit; Hankins, Michael W; Baum, Justin; Hinds, Terry D

    2016-01-01

    Numerous clinical and population studies have demonstrated that increased serum bilirubin levels protect against cardiovascular and metabolic diseases such as obesity and diabetes. Bilirubin is a potent antioxidant, and the beneficial actions of moderate increases in plasma bilirubin have been thought to be due to the antioxidant effects of this bile pigment. In the present study, we found that bilirubin has a new function as a ligand for PPARα. We show that bilirubin can bind directly to PPARα and increase transcriptional activity. When we compared biliverdin, the precursor to bilirubin, on PPARα transcriptional activation to known PPARα ligands, WY 14,643 and fenofibrate, it showed that fenofibrate and biliverdin have similar activation properties. Treatment of 3T3-L1 adipocytes with biliverdin suppressed lipid accumulation and upregulated PPARα target genes. We treated wild-type and PPARα KO mice on a high fat diet with fenofibrate or bilirubin for seven days and found that both signal through PPARα dependent mechanisms. Furthermore, the effect of bilirubin on lowering glucose and reducing body fat percentage was blunted in PPARα KO mice. These data demonstrate a new function for bilirubin as an agonist of PPARα, which mediates the protection from adiposity afforded by moderate increases in bilirubin.

  17. Intracellular accumulation of ethanol in yeast

    SciTech Connect

    Loueiro, V.; Ferreira, H.G.

    1983-09-01

    Ethanol produced in the course of a batch fermentation by Saccharomyces cerevisiae or added from the outside, affects adversely the specific rate of growth of the yeast population, its viability, its specific rate of fermentation, and the specific rates of the uptake of sugar and amino acids. The underlying mechanisms are many and include irreversible denaturation and hyperbolic noncompetitive inhibition of glycolytic enzymes, the exponential noncompetitive inhibition of glucose, maltose, and ammonium transport, the depression of the optimum and the maximum temperature for growth, the increase of the minimum temperature for growth, and the enhancement of thermal death and petite mutation. Nagodawithana and Steinkraus reported that added ethanol was less toxic for S. cerevisiae than ethanol produced by the yeast. The death rates were lower in the presence of added ethanol than those measured at similar external ethanol concentrations endogenously produced. They proposed that, due to an unbalance between the rates of production and the net outflux of ethanol, there would be an intracellular accumulation of ethanol which in turn would explain the apparently greater inhibitory potency of endogenously produced ethanol present in the medium. This hypothesis was supported by the findings of several authors who reported that the intracellular concentration of ethanol, in the course of batch fermentation, is much higher than its concentration in the extracellular medium. The present work is an attempt to clarify this matter. (Refs. 32).

  18. Damage accumulation in neon implanted silicon

    SciTech Connect

    Oliviero, E.; Peripolli, S.; Amaral, L.; Fichtner, P. F. P.; Beaufort, M. F.; Barbot, J. F.; Donnelly, S. E.

    2006-08-15

    Damage accumulation in neon-implanted silicon with fluences ranging from 5x10{sup 14} to 5x10{sup 16} Ne cm{sup -2} has been studied in detail. As-implanted and annealed samples were investigated by Rutherford backscattering spectrometry under channeling conditions and by transmission electron microscopy in order to quantify and characterize the lattice damage. Wavelength dispersive spectrometry was used to obtain the relative neon content stored in the matrix. Implantation at room temperature leads to the amorphization of the silicon while a high density of nanosized bubbles is observed all along the ion distribution, forming a uniform and continuous layer for implantation temperatures higher than 250 deg.C. Clusters of interstitial defects are also present in the deeper part of the layer corresponding to the end of range of ions. After annealing, the samples implanted at temperatures below 250 deg.C present a polycrystalline structure with blisters at the surface while in the other samples coarsening of bubbles occurs and nanocavities are formed together with extended defects identified as (311) defects. The results are discussed in comparison to the case of helium-implanted silicon and in the light of radiation-enhanced diffusion.

  19. Late 20th Century increase in South Pole snow accumulation

    USGS Publications Warehouse

    Mosley-Thompson, E.; Paskievitch, J.F.; Gow, A.J.; Thompson, L.G.

    1999-01-01

    A compilation of the 37-year history of net accumulation at the South Pole [Mosley-Thompson et al., 1995] suggests an increase in net annual accumulation since 1965. This record is sporadic and its quality is compromised by spatially restricted observations and nonsystematic measurement procedures. Results from a new, spatially extensive network of 236 accumulation poles document that the current 5-year (1992-1997) average annual net accumulation at the South Pole is 84.5??8.9 mm water equivalent (w.e.). This accumulation rate reflects a 30% increase since the 1960s when the best, although not optimal, records indicate that it was 65 mm w.e. Identification of two prominent beta radioactivity horizons (1954/1955 and 1964/1965) in six firn cores confirms an increase in accumulation since 1965. Viewed from a longer perspective of accumulation provided by ice cores and a snow mine study, the net accumulation of the 30-year period, 1965-1994, is the highest 30-year average of this millennium. Limited data suggest this recent accumulation increase extends beyond the South Pole region and may be characteristic of the high East Antarctic Plateau. Enhanced accumulation over the polar ice sheets has been identified as a potential early indicator of warmer sea surface temperatures and may offset a portion of the current rise in global sea level. Copyright 1999 by the American Geophysical Union.

  20. What influences heavy metals accumulation in arctic lichen Cetrariella delisei in Svalbard?

    NASA Astrophysics Data System (ADS)

    Węgrzyn, Michał; Wietrzyk, Paulina; Lisowska, Maja; Klimek, Beata; Nicia, Paweł

    2016-12-01

    The main aim of this study was to identify variations in heavy metal concentrations in Cetrariella delisei along a transect from a High Arctic glacier forehead to the shoreline as well as determine the main environmental factors influencing the deposition of heavy metals in arctic lichens. The macrolichen Cetrariella delisei appears to be an interesting alternative to those lichen species used in the past (e.g. Flavocetraria nivalis, Cladonia sp.) for heavy metal biomonitoring purposes in the Arctic: it is widely distributed, easy to identify and reluctantly grazed by reindeer. Fieldwork was conducted in the summer of 2012 in the Kaffiøyra Plain, Oskar II Land, NW Spitsbergen. C. delisei and soil samples were collected from 5 localities. Concentrations of Cr, Mn, Ni, Cu, Zn, Pb, and Cd were measured in each sample. A bioaccumulation factor (BAF) was calculated for all the analyzed elements. The BAFs for Cu, Mn, and Ni showed a relatively low accumulation level in lichen thalli. On the other hand, the BAFs for Cr, Pb, and Zn, revealed an increased accumulation level in C. delisei. The Cd content in lichen is almost equal to its level in the soil. The statistical analyses covered three environmental factors: soil pH, substrate type and distance from the shoreline. The data were examined using the Kruskal-Wallis test, canonical correspondence analysis and a permutation test. The results show that distance from the shoreline had the greatest influence on the majority of the heavy metal concentrations in the lichen thalli and the soil. However, the level of Mn accumulated in the soil is determined by its source in the glacier. Moreover, the soil pH had the greatest effect on the Cd accumulated in the soil and the Mn accumulated in the lichen thalli.

  1. Caterpillar attack triggers accumulation of the toxic maize protein RIP2.

    PubMed

    Chuang, Wen-Po; Herde, Marco; Ray, Swayamjit; Castano-Duque, Lina; Howe, Gregg A; Luthe, Dawn S

    2014-02-01

    Some plant-derived anti-herbivore defensive proteins are induced by insect feeding, resist digestion in the caterpillar gut and are eliminated in the frass. We have identified several maize proteins in fall armyworm (Spodoptera frugiperda) frass that potentially play a role in herbivore defense. Furthermore, the toxicity of one of these proteins, ribosome-inactivating protein 2 (RIP2), was assessed and factors regulating its accumulation were determined. To understand factors regulating RIP2 protein accumulation, maize (Zea mays) plants were infested with fall armyworm larvae or treated with exogenous hormones. The toxicity of recombinant RIP2 protein against fall armyworm was tested. The results show that RIP2 protein is synthesized as an inactive proenzyme that can be processed in the caterpillar gut. Also, caterpillar feeding, but not mechanical wounding, induced foliar RIP2 protein accumulation. Quantitative real-time PCR indicated that RIP2 transcripts were rapidly induced (1 h) and immunoblot analysis indicated that RIP2 protein accumulated soon after attack and was present in the leaf for up to 4 d after caterpillar removal. Several phytohormones, including methyl jasmonate, ethylene, and abscisic acid, regulated RIP2 protein expression. Furthermore, bioassays of purified recombinant RIP2 protein against fall armyworm significantly retarded caterpillar growth. We conclude that the toxic protein RIP2 is induced by caterpillar feeding and is one of a potential suite of proteins that defend maize against chewing herbivores.

  2. Simulation of accumulated matter from human feces in the sawdust matrix of the composting toilet.

    PubMed

    Hotta, Shinya; Funamizu, Naoyuki

    2009-02-01

    A bio-kinetic model for aerobic biodegradation of human feces was applied to the practical operation of the composting toilet. The first aim of this study was to describe nitrogen transformation in the toilet as well as organic carbon. Second aim was to obtain the kinetic parameters for better prediction of accumulated matter for a long time of the practical operation. Six simple fractions of fecal carbon (slowly hydrolyzable matter, easily hydrolyzable matter, readily biodegradable matter, biologically inert type of matter etc.) were prepared in the model. Nitrogen factors were incorporated to each factor of fecal carbon. Modification of only one kinetic parameter for hydrolysis of slowly hydrolyzable carbon was required to obtain the best fitting curve of accumulation in the toilet. Model prediction for one-year operation of the toilet showed that temporal accumulation of biodegradable organic matter was significant in the first stage whereas main accumulation would be biologically inert type of organic matter at the end of the operation.

  3. Effect of arsenic species on the growth and arsenic accumulation in Cucumis sativus.

    PubMed

    Hong, Sun Hwa; Choi, Sun Ah; Lee, Myung-Hyun; Min, Bo Ra; Yoon, Cheolho; Yoon, Hyeon; Cho, Kyung-Suk

    2011-01-01

    The effects of arsenic (As) species, such as As(III), As(V) and dimethylarsinic acid (DMA), on the accumulation of As in cucumber (Cucumis sativus), as well as on its growth in a soil mesocosm were evaluated. When Cucumis sativus was cultivated in soils contaminated with 20 and 50 mg/kg of As(III), As(V) or DMA for 40 days, the growth was markedly inhibited by the inorganic As (As(III) and As(V)) rather than the organic As (DMA). Irrespective of the As species, the As concentrations accumulated in Cucumis sativus increased with increasing As concentration in the soil. The As bioaccumulation factors from soil into the tissue of Cucumis sativus were 17.5-35.4, 29.3-42.7 and 17.6-25.7 for As(III), As(V) and DMA, respectively. In addition, the As translocation factors from the roots to shoots were 0.025-0.031, 0.018-0.032 and 0.014-0.026 for As(III), As(V) and DMA, respectively. In conclusion, Cucumis sativus mainly accumulated As in its roots rather than its shoots and easily accumulated inorganic rather than organic As from the soil into its tissue.

  4. Substrate role in the accumulation of heavy metals in sporocarps of wild fungi.

    PubMed

    Campos, Juan A; Tejera, Noel A; Sánchez, Carlos J

    2009-10-01

    The distribution of neodymium, lead, thorium and uranium was investigated in about 100 samples of 12 different species of common, edible and non-edible mushrooms collected in unpolluted areas in the province of Ciudad Real, Central Spain. The quantitative analysis of heavy metals was performed by X-ray fluorescence spectrometry (a simple, accurate and non-destructive method). The concentration of these elements was related to three factors: mushroom specie, life style/substrate and study area. The results reveal considerable amounts of the four metals in all species analyzed as well as significant differences on the capability to accumulate these elements. The maximum absorption of Nd and Pb was found in the ectomycorrhizal Cantharellus cibarius, reaching values of 7.10 and 4.86 microg g(-1), respectively. Thorium and uranium were mainly accumulated (3.63 and 4.13 microg g(-1), respectively) in Hypholoma fasciculare although it is an epiphyte species, isolated from the mineral particles of soil. The distribution patterns of these metals in sporocarps of different habitats and locations showed no significant differences, except for thorium, mainly accumulated in mushrooms living on wood regarding these living on soil organic matter. The species-specific is therefore the determining factor for accumulation of Nd, Pb, Th and U, more than substrate, in this study.

  5. Kaempferol Isolated from Nelumbo nucifera Inhibits Lipid Accumulation and Increases Fatty Acid Oxidation Signaling in Adipocytes.

    PubMed

    Lee, Bonggi; Kwon, Misung; Choi, Jae Sue; Jeong, Hyoung Oh; Chung, Hae Young; Kim, Hyeung-Rak

    2015-12-01

    Stamens of Nelumbo nucifera Gaertn have been used as a Chinese medicine due to its antioxidant, hypoglycemic, and antiatherogenic activity. However, the effects of kaempferol, a main component of N. nucifera, on obesity are not fully understood. We examined the effect of kaempferol on adipogenesis and fatty acid oxidation signaling pathways in 3T3-L1 adipocytes. Kaempferol reduced cytoplasmic triglyceride (TG) accumulation in dose and time-dependent manners during adipocyte differentiation. Accumulation of TG was rapidly reversed by retrieving kaempferol treatment. Kaempferol broadly decreased mRNA or protein levels of adipogenic transcription factors and their target genes related to lipid accumulation. Kaempferol also suppressed glucose uptake and glucose transporter GLUT4 mRNA expression in adipocytes. Furthermore, protein docking simulation suggests that Kaempferol can directly bind to and activate peroxisome proliferator-activated receptor (PPAR)-α by forming hydrophobic interactions with VAL324, THR279, and LEU321 residues of PPARα. The binding affinity was higher than a well-known PPARα agonist fenofibrate. Consistently, mRNA expression levels of PPARα target genes were increased. Our study indicates while kaempferol inhibits lipogenic transcription factors and lipid accumulation, it may bind to PPARα and stimulate fatty acid oxidation signaling in adipocytes.

  6. Monitoring Recovery of Prince William Sound, Alaska, Following the Exxon Valdez Oil Spill: Bioavailability of PAH in Offshore Sediments

    SciTech Connect

    Neff, Jerry M.; Boehm, Paul D.; Kropp, Roy K.; Stubblefield, William A.; Page, David S.

    2004-11-02

    We determined the bioavailability to sediment dwelling marine worms of polycyclic aromatic hydrocarbons (PAHs) associated with offshore sediments from 3 spill path and 3 non-spill path areas of Prince William Sound (PWS), Alaska, 12 years after the Exxon Valdez oil spill. The PAHs in sediments from 4 sites sampled in 2001 were primarily from a regional natural petrogenic background derived from organic-rich shales and natural oil seeps associated with sources southeast of PWS. Pyrogenic (combustion) PAHs, primarily from former human and industrial activities, were more abundant than petrogenic PAHs in nearshore sediments from 2 bays associated with past and current human activities. We performed sediment bioaccumulation tests with the six sediments and polychaete worms according to standard EPA protocols. All the PAHs had a very low bioavailability, as indicated by low values for biota/sediment accumulation factors (BSAFs) in the worms. Mean BSAFs for total PAHs (sum of 41 analyte groups) ranged from 0.002 to 0.009. The worms exposed to spill path and non-spill path sediments bioaccumulated small amounts of 4- and 5-ring PAHs, particularly fluoranthene and pyrene; these higher molecular weight PAHs are responsible for induction of mixed function oxygenase (MFO) activity in marine fish, birds, and mammals. These results may help to explain in part why fish from throughout PWS exhibit induced MFO activity. Elevated levels of MFO activity cannot be used as evidence of recent exposure by marine fish, birds, and mammals in the sound to Exxon Valdez oil.

  7. Concentration trends and bioavailability of chlorinated dioxins to crabs from B.C. pulp mills and harbours

    SciTech Connect

    Yunker, M.B.; Cretney, W.J.

    1995-12-31

    Since 1990 approximately 100 synchronous samples of sediment and Dungeness crab (Cancer magister) hepatopancreas have been collected from B.C. harbours and pulp mill sites and analyzed for chlorinated dibenzo-p-dioxin and dibenzofuran congeners. Mean sediment/crab bioconcentration factors (BSAFs) for both dioxins and furans decrease uniformly from approximately log 0.5 for the tetrachloro congeners to log {minus}2 for the octachloro congeners. Individual pairs of samples vary, but no systematic trends are apparent either over time or between mill sites or depositional environments. Differences in dioxin and furan sources that are apparent as principal components analysis (PCA) class separations in both the sediment and crab data sets also are not reflected in differences in BSAFS. Partial least squares (PLS) path modeling reveals little correspondence in congener patterns between sediments and crabs and rules out a direct pathway for contaminant transfer. Results suggest some food chain bioaccumulation for the tetra and pentachloro congeners, but bioavailability to the crabs decreases from the penta to octachloro congeners, Concentration trends over time for both sediment and crabs from the mill sites suggest that the mill-related dioxin and furans are preferentially associated with a suspended particulate or near-bottom nepheloid fraction that is easily buried over time in quiescent areas (e.g., fjords), but has remained available for accumulation in locations that are well flushed by tidal action.

  8. Effects of benthos, temperature, and dose on the fate of hexabromocyclododecane in experimental coastal ecosystems.

    PubMed

    Bradshaw, Clare; Strid, Anna; von Stedingk, Hans; Gustafsson, Kerstin

    2015-06-01

    The authors studied the fate of the brominated flame retardant hexabromocyclododecane (HBCDD) added in a particulate suspension to experimental ecosystems assembled from brackish (Baltic Sea) coastal bays. Two experiments examined how benthic macrofauna (over 21 d) and increased temperature (14 d) affected HBCDD concentrations and fractionation of α, β, and γ diastereomers in the water, sediment, and biota. A third experiment run over 3 seasons (231 d), studied the effect of HBCDD dose on the same endpoints. In all treatments of the 3 experiments, HBCDD partitioned mainly to the sediment, and this proportion increased with time. Presence of macrofauna tended to increase the HBCDD concentration in the sediment and decreased its concentration in the water. Increased temperature (+ 5°C) decreased the amount of HBCDD in sediment and water but not in the filter- and deposit-feeding infaunal bivalves (Macoma balthica). The partitioning between water, sediment, and biota was not concentration dependent. In all treatments, sediment became enriched in γ-HBCDD, M. balthica in α-HBCDD, and water in α- and β-HBCDD. Bioaccumulation of HBCDD in M. balthica was high in all experiments (log biota-sediment accumulation factor [BSAF] > 1.25), the α diastereomer contributing the most (log BSAF 2.1-5.2). There is a risk of trophic transfer of HBCDD from benthic to pelagic food webs, as well as secondary poisoning of marine consumers.

  9. Modeling of Bioaccumulation in Marine Benthic Invertebrates Using a Multispecies Experimental Approach.

    PubMed

    Diepens, Noël J; Van den Heuvel-Greve, Martine J; Koelmans, Albert A

    2015-11-17

    The causal links between species traits and bioaccumulation by marine invertebrates are poorly understood. We assessed these links by measuring and modeling polychlorinated biphenyl bioaccumulation by four marine benthic species. Uniformity of exposure was achieved by testing each species in the same aquarium, separated by enclosures, to ensure that the observed variability in bioaccumulation was due to species traits. The relative importance of chemical uptake from pore water or food (organic matter, OM) ingestion was manipulated by using artificial sediment with different OM contents. Biota sediment accumulation factors (BSAFs) ranged from 5 to 318, in the order Nereis virens < Arenicola marina ≈ Macoma balthica < Corophium volutator. Calibration of a kinetic model provided species-specific parameters that represented the key species traits, thus illustrating how models provide an opportunity to read across benthic species with different feeding strategies. Key traits included species-specific differentiation between (1) ingestion rates, (2) ingestion of suspended and settled OM, and (3) elimination rates. The high BSAF values and their concomitant variability across the species challenges approaches for exposure assessment based on pore water concentration analysis and equilibrium partition theory. We propose that combining multienclosure testing and modeling will substantially improve exposure assessment in sediment toxicity tests.

  10. Bioaccumulation of PAHs from creosote-contaminated sediment in a laboratory-exposed freshwater oligochaete, Lumbriculus variegatus.

    PubMed

    Hyötyläinen, Tarja; Oikari, Aimo

    2004-10-01

    The oligochaete, Lumbriculus variegatus, was used for a bioaccumulation assay in the creosote-contaminated sediment of Lake Jämsänvesi in a 28-day experiment. The PAH concentrations of the whole body tissue of worms, sediments and water samples were determinated by GC-MS. Chemical analyses showed that benzo(k)fluoranthene, anthracene and fluorene were the main PAH compounds present in the tissue of oligochaetes, just as in the sediment. The biota-sediment accumulation factors (BSAFs) of the individual PAHs varied from 1.2 to 5.7. It is concluded that oligochaetes have a marked ability to accumulate and retain PAHs from creosote-contaminated sediment.

  11. DISTRIBUTED AND ACCUMULATED REINFORCEMENT ARRANGEMENTS: EVALUATIONS OF EFFICACY AND PREFERENCE

    PubMed Central

    DELEON, ISER G.; CHASE, JULIE A.; FRANK-CRAWFORD, MICHELLE A.; CARREAU-WEBSTER, ABBEY B.; TRIGGS, MANDY M.; BULLOCK, CHRISTOPHER E.; JENNETT, HEATHER K.

    2015-01-01

    We assessed the efficacy of, and preference for, accumulated access to reinforcers, which allows uninterrupted engagement with the reinforcers but imposes an inherent delay required to first complete the task. Experiment 1 compared rates of task completion in 4 individuals who had been diagnosed with intellectual disabilities when reinforcement was distributed (i.e., 30-s access to the reinforcer delivered immediately after each response) and accumulated (i.e., 5-min access to the reinforcer after completion of multiple consecutive responses). Accumulated reinforcement produced response rates that equaled or exceeded rates during distributed reinforcement for 3 participants. Experiment 2 used a concurrent-chains schedule to examine preferences for each arrangement. All participants preferred delayed, accumulated access when the reinforcer was an activity. Three participants also preferred accumulated access to edible reinforcers. The collective results suggest that, despite the inherent delay, accumulated reinforcement is just as effective and is often preferred by learners over distributed reinforcement. PMID:24782203

  12. Distributed and accumulated reinforcement arrangements: evaluations of efficacy and preference.

    PubMed

    DeLeon, Iser G; Chase, Julie A; Frank-Crawford, Michelle A; Carreau-Webster, Abbey B; Triggs, Mandy M; Bullock, Christopher E; Jennett, Heather K

    2014-01-01

    We assessed the efficacy of, and preference for, accumulated access to reinforcers, which allows uninterrupted engagement with the reinforcers but imposes an inherent delay required to first complete the task. Experiment 1 compared rates of task completion in 4 individuals who had been diagnosed with intellectual disabilities when reinforcement was distributed (i.e., 30-s access to the reinforcer delivered immediately after each response) and accumulated (i.e., 5-min access to the reinforcer after completion of multiple consecutive responses). Accumulated reinforcement produced response rates that equaled or exceeded rates during distributed reinforcement for 3 participants. Experiment 2 used a concurrent-chains schedule to examine preferences for each arrangement. All participants preferred delayed, accumulated access when the reinforcer was an activity. Three participants also preferred accumulated access to edible reinforcers. The collective results suggest that, despite the inherent delay, accumulated reinforcement is just as effective and is often preferred by learners over distributed reinforcement.

  13. [Biosynthesis and accumulation of poly(3-hydroxybutyrate) in Vibrio natriegens].

    PubMed

    Liu, Shuang-Jiang

    2002-09-01

    Accumulation of poly(3-hydroxybutyrate) [poly(3HB)] by V. natriegens was studied. Results indicated that V. natriegens used glucose, gluconate, fructose and molasses as carbon sources for poly(3HB) synthesis. When molasses was used, up to 28.4% of poly(3HB) to cellular dry weight was accumulated. The accumulation of poly(3HB) followed, was not simultaneously to, the cell growth. Analysis of the PHA polymerase, beta-ketothiolase, and acetoacetyl-CoA reductase showed that the poly(3HB) accumulation was correlated to the increase of their activities in cells. Poly(3HB) accumulation was also related to the de novo fatty acid synthesis, as revealed by the results that cerulenin, a specific inhibitor to the de novo fatty acid synthesis, significantly reduced accumulation of poly(3HB). Based on the results from this study, the synthetic pathway of poly(3HB) was proposed.

  14. Accumulation and hyperaccumulation of copper in plants

    NASA Astrophysics Data System (ADS)

    Adam, V.; Trnkova, L.; Huska, D.; Babula, P.; Kizek, R.

    2009-04-01

    Copper is natural component of our environment. Flow of copper(II) ions in the environment depends on solubility of compounds containing this metal. Mobile ion coming from soil and rocks due to volcanic activity, rains and others are then distributed to water. Bio-availability of copper is substantially lower than its concentration in the aquatic environment. Copper present in the water reacts with other compounds and creates a complex, not available for organisms. The availability of copper varies depending on the environment, but moving around within the range from 5 to 25 % of total copper. Thus copper is stored in the sediments and the rest is transported to the seas and oceans. It is common knowledge that copper is essential element for most living organisms. For this reason this element is actively accumulated in the tissues. The total quantity of copper in soil ranges from 2 to 250 mg / kg, the average concentration is 30 mg / kg. Certain activities related to agriculture (the use of fungicides), possibly with the metallurgical industry and mining, tend to increase the total quantity of copper in the soil. This amount of copper in the soil is a problem particularly for agricultural production of food. The lack of copper causes a decrease in revenue and reduction in quality of production. In Europe, shows the low level of copper in total 18 million hectares of farmland. To remedy this adverse situation is the increasing use of copper fertilizers in agricultural soils. It is known that copper compounds are used in plant protection against various illnesses and pests. Mining of minerals is for the development of human society a key economic activity. An important site where the copper is mined in the Slovakia is nearby Smolníka. Due to long time mining in his area (more than 700 years) there are places with extremely high concentrations of various metals including copper. Besides copper, there are also detected iron, zinc and arsenic. Various plant species

  15. Metal accumulation in wild-caught opossum.

    PubMed

    Lockhart, J Mitchell; Siddiqui, Samreen; Loughry, W J; Bielmyer-Fraser, Gretchen K

    2016-06-01

    The Virginia opossum (Didelphis virginiana) is widespread in the USA, ranging south through Latin America. The ecology of opossums is such that they are in frequent contact with soils, suggesting that they may function as a valuable bioindicator for chemical contamination in terrestrial environments. Surprisingly, there have been virtually no toxicology studies on opossums. Here, we provide the first analysis of metal contaminants in opossum liver tissues. Liver samples were obtained from 471 opossums, collected from 2003 to 2006, at four sites in North Florida and South Georgia, USA, and concentrations of copper, lead, nickel, selenium, and zinc were measured. We found little evidence of age differences in the concentration of any of the metals. However, there were at least some significant differences between years, males and females, and between sites for each metal, although the pattern of these differences was not always consistent across metals. Concentrations of metals in liver tissue were positively correlated with one another, primarily of each metal (except Pb) with zinc. Reference levels of metal contaminants are not available for opossums, but concentrations of Cu, Ni, Pb, and Zn in our samples were for the most part significantly higher than those reported from liver tissues of nine-banded armadillos (Dasypus novemcinctus) collected at the same sites and in the same years. Data from other small mammals studied elsewhere further indicate that metal concentrations in opossums were high, but at this time, it is not possible to determine if these elevated levels generated toxicity. The substantial temporal and spatial variation we found in metal concentrations suggests that determination of baseline levels for opossums may not be straightforward. Nonetheless, this is the first study quantifying metal accumulation in the livers of Didelphis virginiana and, as such, provides an important starting point for future research.

  16. Accumulation of chlorinated benzenes in earthworms

    USGS Publications Warehouse

    Beyer, W.N.

    1996-01-01

    Chlorinated benzenes are widespread in the environment. Hexachlorobenzene, pentachlorobenzene and all isomers of dichlorobenzenes, trichlorobenzenes, and tetrachlorobenzenes, have been detected in fish, water, and sediments from the Great Lakes. This paper describes a long-term (26 week) experiment relating the concentrations of chlorinated benzenes in earthworms to 1) the length of exposure, and it describes three 8-week experiments relating concentrations of chlorinated benzenes in earthworms to 2) their concentration in soil 3) the soil organic matter content and, 4) the degree of chlorination. In the 26-week experiment, the concentration of 1,2,4 - trichlorobenzene in earthworms fluctuated only slightly about a mean of 0.63 ppm (Fig. 1). Although a statistically significant decrease can be demonstrated over the test (Pearson correlation coefficient, r = -0.62 p < 0.05), the decrease was minor. Hexachlorobenzene in earthworms showed a cyclical trend that coincided with replacement of the media, and a slight but statistically significant tendency to increase from about 2 to 3 ppm over the 26 weeks (r = 0.55, p < 0.05). Concentrations of both trichlorobenzene and hexachlorobenzene in earthworms increased as the concentrations in the soil increased (Fig. 2), but leveled off at the highest soil concentrations. The most surprising result of this study was the relatively low concentrations in earthworms compared to those in soils. The average concentration of each of the six isomers of trichlorobenzene and tetrachlorobenzene in earthworms was only about 1 ppm (Table 2); the isomeric structure did not affect accumulation. The concentration of organic matter in soil had a prominent effect on hexachlorobenzene concentrations in earthworms (Fig. 3). Hexachlorobenzene concentrations decreased steadily from 9.3 ppm in earthworms kept in soil without any peat moss added to about 1 ppm in soil containing 16 or 32% organic matter.

  17. Cadmium accumulation in leaves of leafy vegetables.

    PubMed

    Baldantoni, Daniela; Morra, Luigi; Zaccardelli, Massimo; Alfani, Anna

    2016-01-01

    Leafy vegetables have a relatively high potential for Cd uptake and translocation, and are thus considered Cd accumulators. For this reason, leaves and roots of lettuce (Lactuca sativa L.) and endive (Cichorium endivia L.) plants, grown on different agricultural soils in Campania region (southern Italy), subjected to different fertilisation treatments (unfertilisation, compost amendment and mineral fertilisation), were analysed for Cd concentrations. Moreover, to clarify if the highest concentrations found are linked to older and inedible or to younger and edible leaves, external and internal endive leaves were separately analysed. All the leafy vegetables analysed showed on average 2-fold higher Cd concentrations in leaves than in roots. Leaf Cd concentrations in both lettuce and endive plants significantly differed among fertilisation treatments, with values highest in the plants grown on mineral fertilised soils. Apart from the soil fertilisation treatments, however, Cd leaf concentrations were often higher (up to 4-fold) than the threshold deduced by the EU 420/2011 Regulation, although the plants grew on unpolluted soils. Anyway, external leaves of endive plants showed significantly higher concentrations than internal leaves (in some cases the values were 3-fold higher), partly reassuring on the consumption of the younger leaves. Moreover, this study points out two major drawbacks in the Italian and European regulatory frameworks: (1) metal concentration (as total and/or available fraction) limits in agricultural soils are lacking; (2) metal concentration thresholds (currently existing only for Cd and Pb in crops) reported in the EU 420/2011 Regulation, expressed on the fresh weight basis rather than on the dry weight basis, appear not suitable.

  18. Bicarbonate trigger for inducing lipid accumulation in algal systems

    SciTech Connect

    Gardner, Robert; Peyton, Brent; Cooksey, Keith E.

    2015-08-04

    The present invention provides bicarbonate containing and/or bicarbonate-producing compositions and methods to induce lipid accumulation in an algae growth system, wherein the algae growth system is under light-dark cycling condition. By adding said compositions at a specific growth stage, said methods lead to much higher lipid accumulation and/or significantly reduced total time required for accumulating lipid in the algae growth system.

  19. 40 CFR 91.117 - Certification procedure-service accumulation.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... PROGRAMS (CONTINUED) CONTROL OF EMISSIONS FROM MARINE SPARK-IGNITION ENGINES Emission Standards and... than recommended lubrication and filter changes, may be performed during service accumulation...

  20. Zinc tolerance and accumulation in the ferns Polypodium cambricum L. and Pteris vittata L.

    PubMed

    Roccotiello, Enrica; Manfredi, Alice; Drava, Giuliana; Minganti, Vincenzo; Giorgio Mariotti, Mauro; Berta, Graziella; Cornara, Laura

    2010-09-01

    Zn uptake and compartmentalisation were studied in two ferns, the European Polypodium cambricum L., a possible Zn tolerant, and the sub-tropical Pteris vittata L., an As accumulator also able to accumulate Zn. Ferns growing in hydroponic systems were exposed to Zn concentrations ranging from non-toxic to lethal doses (0, 50, 125, 250, 500 mg kg(-1) as ZnSO4). After treatments, the following analyses were made: photosynthetic efficiency (Handy PEA), anatomical symptoms (optical and scanning electron microscopy), determination of Zn in fronds, rhizome and roots (atomic emission spectrometry, ICP-AES). Both species showed high bioconcentration and bioaccumulation factors, but low translocation factor, indicating Zn sequestration in the root/rhizome system. P. cambricum was more resistant to Zn, while P. vittata suffered from unrestricted uptake leading to macro- and microscopical damages and plant death. Data suggest that P. cambricum could be suitable for phytostabilisation of Zn-contaminated soils in temperate areas.

  1. Hippocampal activation is associated with longitudinal amyloid accumulation and cognitive decline.

    PubMed

    Leal, Stephanie L; Landau, Susan M; Bell, Rachel K; Jagust, William J

    2017-02-08

    The amyloid hypothesis suggests that beta-amyloid (Aβ) deposition leads to alterations in neural function and ultimately to cognitive decline in Alzheimer's disease. However, factors that underlie Aβ deposition are incompletely understood. One proposed model suggests that synaptic activity leads to increased Aβ deposition. More specifically, hyperactivity in the hippocampus may be detrimental and could be one factor that drives Aβ deposition. To test this model, we examined the relationship between hippocampal activity during a memory task using fMRI and subsequent longitudinal change in Aβ using PIB-PET imaging in cognitively normal older adults. We found that greater hippocampal activation at baseline was associated with increased Aβ accumulation. Furthermore, increasing Aβ accumulation mediated the influence of hippocampal activation on declining memory performance, demonstrating a crucial role of Aβ in linking hippocampal activation and memory. These findings support a model linking increased hippocampal activation to subsequent Aβ deposition and cognitive decline.

  2. Effects of Nitrogen and Shading on Root Morphologies, Nutrient Accumulation, and Photosynthetic Parameters in Different Rice Genotypes

    PubMed Central

    Pan, Shenggang; Liu, Haidong; Mo, Zhaowen; Patterson, Bob; Duan, Meiyang; Tian, Hua; Hu, Shuijing; Tang, Xiangru

    2016-01-01

    Nitrogen availability and illumination intensity are two key factors which affect rice growth. However, their influences on total nitrogen accumulation, photosynthetic rate, root morphologies, and yields are not fully understood. We conducted two field experiments to (1) evaluate the effects of shading under different N treatments on photosynthetic parameters, root morphologies, total nutrient accumulation, and grain yields of rice; and (2) elucidate the relationship between total nutrient accumulation and root morphologies under different shading conditions and nitrogen treatments. Three nitrogen rates, three shading treatments, and three different rice cultivars were used in two field experiments. Double shading during the grain-filling stage decreased total nutrient accumulation, altered root morphological characteristics, and decreased yields in rice. There were also significant interaction effects between nitrogen and shading on photosynthetic rate, transpiration rate, and total root length, root superficial area, and root volume. Significant interactions were found among cultivars and shading for photosynthetic rate and transpiration rate. Correlation analysis revealed that total nitrogen accumulation (TNA) and potassium accumulation (TKA) were significantly positively correlated with total root length, root superficial area, and root volume. N application could alleviate the detrimental effects of shading on total nutrient accumulation and grain yield in rice. PMID:27557779

  3. Longitudinal monitoring of skin accumulation of nanocarriers and biologicals with fiber optic near infrared fluorescence spectroscopy (FONIRS).

    PubMed

    Griffin, James I; Benchimol, Michael J; Simberg, Dmitri

    2017-02-10

    Systemically injected drug delivery systems distribute into various organs and tissues, including liver, spleen and kidneys. Recent reports pointed out a significant accumulation of systemically injected nanoparticles in the skin. Skin constitutes the largest organ in the body with important immune functions, and accumulation of drug delivery systems could have significant implications for skin toxicity in living subjects. Fiber optic-based near-infrared spectroscopy (FONIRS) setup was developed and tested for measuring of NIR (760nm excitation) emission spectra in the skin. Ex vivo spectral measurements of NIR fluorescence through the skin showed linear response down to 34 femtomole of dye DiR. Following systemic injection of IRDye 800 labeled 500kDa dextran, FONIRS detected an immediate and stable accumulation of fluorescence in the skin. Longitudinal monitoring of skin accumulation and elimination of IRDye 800-labeled therapeutic anti-epidermal growth factor antibody (cetuximab) showed significant signal in the skin after the antibody cleared from circulation. Comparison of skin accumulation of DiR labeled, long-circulating PEGylated liposomes with short-circulating non-PEGylated liposomes showed much higher accumulation of PEGylated liposomes that persisted several days after the liposomes cleared from blood. Measurements with FONIRS enabled to estimate skin concentration of liposomes (percent of injected dose per gram). This simple and practical approach can be used to monitor accumulation of drug delivery systems in preclinical and clinical studies.

  4. Accumulation of biomass and mineral elements with calendar time by cotton: application of the expanded growth model.

    PubMed

    Overman, Allen R; Scholtz, Richard V

    2013-01-01

    Accumulation of plant biomass (Mg ha(-1)) with calendar time (wk) occurs as a result of photosynthesis for green land-based plants. A corresponding accumulation of mineral elements (kg ha(-1)) such as nitrogen, phosphorus, and potassium occurs from the soil through plant roots. Field data from literature for the warm-season annual cotton (Gossypium hirsutum L.) are used in this analysis. The expanded growth model is used to describe accumulation of biomass and mineral elements with calendar time. The growth model predicts a simple linear relationship between biomass yield and the growth quantifier, which is confirmed with the data. The growth quantifier incorporates the unit processes of distribution of solar energy which drives biomass accumulation by photosynthesis, partitioning of biomass between light-gathering and structural components of the plants, and an aging function. A hyperbolic relationship between plant nutrient uptake and biomass yield is assumed, and is confirmed for the mineral elements nitrogen, phosphorus, and potassium. It is concluded that the rate limiting process in the system is biomass accumulation by photosynthesis and that nutrient accumulation occurs in virtual equilibrium with biomass accumulation. The expanded growth model describes field data from California and Alabama rather well. Furthermore, all model parameters were common for the two sites with the exception of the yield factor A which accounts for differences in soil types, environmental conditions, fertilizer levels, and plant population.

  5. Effects of Nitrogen and Shading on Root Morphologies, Nutrient Accumulation, and Photosynthetic Parameters in Different Rice Genotypes.

    PubMed

    Pan, Shenggang; Liu, Haidong; Mo, Zhaowen; Patterson, Bob; Duan, Meiyang; Tian, Hua; Hu, Shuijing; Tang, Xiangru

    2016-08-25

    Nitrogen availability and illumination intensity are two key factors which affect rice growth. However, their influences on total nitrogen accumulation, photosynthetic rate, root morphologies, and yields are not fully understood. We conducted two field experiments to (1) evaluate the effects of shading under different N treatments on photosynthetic parameters, root morphologies, total nutrient accumulation, and grain yields of rice; and (2) elucidate the relationship between total nutrient accumulation and root morphologies under different shading conditions and nitrogen treatments. Three nitrogen rates, three shading treatments, and three different rice cultivars were used in two field experiments. Double shading during the grain-filling stage decreased total nutrient accumulation, altered root morphological characteristics, and decreased yields in rice. There were also significant interaction effects between nitrogen and shading on photosynthetic rate, transpiration rate, and total root length, root superficial area, and root volume. Significant interactions were found among cultivars and shading for photosynthetic rate and transpiration rate. Correlation analysis revealed that total nitrogen accumulation (TNA) and potassium accumulation (TKA) were significantly positively correlated with total root length, root superficial area, and root volume. N application could alleviate the detrimental effects of shading on total nutrient accumulation and grain yield in rice.

  6. Dynamically accumulated dose and 4D accumulated dose for moving tumors

    SciTech Connect

    Li Heng; Li Yupeng; Zhang Xiaodong; Li Xiaoqiang; Liu Wei; Gillin, Michael T.; Zhu, X. Ronald

    2012-12-15

    Purpose: The purpose of this work was to investigate the relationship between dynamically accumulated dose (dynamic dose) and 4D accumulated dose (4D dose) for irradiation of moving tumors, and to quantify the dose uncertainty induced by tumor motion. Methods: The authors established that regardless of treatment modality and delivery properties, the dynamic dose will converge to the 4D dose, instead of the 3D static dose, after multiple deliveries. The bounds of dynamic dose, or the maximum estimation error using 4D or static dose, were established for the 4D and static doses, respectively. Numerical simulations were performed (1) to prove the principle that for each phase, after multiple deliveries, the average number of deliveries for any given time converges to the total number of fractions (K) over the number of phases (N); (2) to investigate the dose difference between the 4D and dynamic doses as a function of the number of deliveries for deliveries of a 'pulsed beam'; and (3) to investigate the dose difference between 4D dose and dynamic doses as a function of delivery time for deliveries of a 'continuous beam.' A Poisson model was developed to estimate the mean dose error as a function of number of deliveries or delivered time for both pulsed beam and continuous beam. Results: The numerical simulations confirmed that the number of deliveries for each phase converges to K/N, assuming a random starting phase. Simulations for the pulsed beam and continuous beam also suggested that the dose error is a strong function of the number of deliveries and/or total deliver time and could be a function of the breathing cycle, depending on the mode of delivery. The Poisson model agrees well with the simulation. Conclusions: Dynamically accumulated dose will converge to the 4D accumulated dose after multiple deliveries, regardless of treatment modality. Bounds of the dynamic dose could be determined using quantities derived from 4D doses, and the mean dose difference

  7. Identification of candidate genes for phenolics accumulation in tomato fruit.

    PubMed

    Di Matteo, Antonio; Ruggieri, Valentino; Sacco, Adriana; Rigano, Maria Manuela; Carriero, Filomena; Bolger, Anthony; Fernie, Alisdair R; Frusciante, Luigi; Barone, Amalia

    2013-05-01

    Phenolics are antioxidants present in tomato fruit that confer healthy benefits and exhibit crucial roles for plant metabolism and response to environmental stimuli. An approach based on two genomics platforms was undertaken to identify candidate genes associated to higher phenolics content in tomato fruit. A comparative transcriptomic analysis between the S. pennellii Introgression Line 7-3, which produced an average higher level of fruit phenolics, and the cultivated variety M82, revealed that their differences are attributed to genes involved in phenolics accumulation into the vacuole. The up-regulation of genes coding for one MATE-transporter, one vacuolar sorting protein and three GSTs supported this hypothesis. The observed balancing effect between two ethylene responsive factors (ERF1 and ERF4) was also hypothesized to drive the transcriptional regulation of these transport genes. In order to confirm such model a TILLING platform was explored. A mutant was isolated harbouring a point mutation in the ERF1 cds that affects the protein sequence and its expected function. Fruits of the mutant exhibited a significant reduced level of phenolics than the control variety. Changes in the expression of genes involved in sequestration of phenolics in vacuole also supported the hypothesized key-role of ERF1 in orchestrating these genes.

  8. Impaired accumulation of granulocytes in the lung during ozone adaptation.

    PubMed

    Fiévez, L; Kirschvink, N; Dogné, S; Jaspar, F; Merville, M P; Bours, V; Lekeux, P; Bureau, F

    2001-09-01

    Respiratory alterations induced by an acute exposure to ozone (O(3)) paradoxically resolve during multiday exposure. This adaptation is characteristically accompanied by a gradual attenuation of lung neutrophilia. As maintenance of neutrophilia at the site of inflammation is due to cytokine-mediated delayed neutrophil apoptosis, which is associated with reduced levels of Bax, a proapoptotic protein, we sought to determine whether defects in these mechanisms could account for O(3) adaptation. Lung granulocytes obtained at different time points from calves exposed to 0.75 ppm O(3) for 12 h/d for 7 consecutive days neither showed enhancement of survival nor Bax deficiency, when compared to blood granulocytes. To further investigate the effects of an exogenous oxidative stress on neutrophil survival, human granulocytes were treated with hydrogen peroxide alone, or in combination with granulocyte/macrophage colony-stimulating factor, an antiapoptotic cytokine. Both treatments led to rapid apoptosis associated with downregulation of Bcl-x(L) and Bcl-2, two antiapoptotic proteins. This study shows that O(3) adaptation is associated with a failure in the mechanisms leading to accumulation of neutrophils at the site of inflammation, and suggests that this defect is due to direct proapoptotic effects of exogenous oxidative stress on granulocytes.

  9. Geochemical controls on vanadium accumulation in fossil fuels

    USGS Publications Warehouse

    Breit, G.N.; Wanty, R.B.

    1989-01-01

    High vanadium contents in petroleum and other fossil fuels have been attributed to organic-matter type, organisms, volcanic emanations, diffusion of sea water, and epigenetic enrichment. However, these factors are inadequate to account for the high abundance of vanadium in some fossil fuels and the paucity in others. By examining vanadium deposits in sedimentary rocks with sparse organic matter, constraints are placed on processes controlling vanadium accumulation in organic-rich sediments. Vanadium, as vanadate (V(V)), entered some depositional basins in oxidizing waters from dry, subaerial environments. Upon contact with organic matter in anoxic waters, V(V) is reduced to vanadyl (V(IV)), which can be removed from the water column by adsorption. H2S reduces V(IV) to V(III), which hydrolyzes and precipitates. The lack of V(III) in petroleum suggests that reduction of V(IV) to V(III) is inhibited by organic complexes. In the absence of strong complexing agents, V(III) forms and is incorporated in clay minerals.

  10. Geochemical controls of vanadium accumulation in fossil fuels

    USGS Publications Warehouse

    Breit, G.N.; Wanty, R.B.

    1989-01-01

    High vanadium contents in petroleum and other fossil fuels have been attributed to organic-matter type, organisms, volcanic emanations, diffusion of sea water, and epigenetic enrichment. However, these factors are inadequate to account for the high abundance of vanadium in some fossil fuels and the paucity in others. By examining vanadium deposits in sedimentary rocks with sparse organic matter, constraints are placed on processes controlling vanadium accumulation in organic-rich sediments. Vanadium, as vanadate (V(V)), entered some depositional basins in oxidizing waters from dry, subaerial environments. Upon contact with organic matter in anoxic waters, V(V) is reduced to vanadyl (V(IV)), which can be removed from the water column by adsorption. H2S reduces V(IV) to V(III), which hydrolyzes and precipitates. The lack of V(III) in petroleum suggests that reduction of V(IV) to V(III) is inhibited by organic complexes. In the absence of strong complexing agents, V(III) forms and is incorporated in clay minerals.

  11. Isolation and characterization of cesium-accumulating bacteria.

    PubMed Central

    Tomioka, N; Uchiyama, H; Yagi, O

    1992-01-01

    Cesium-accumulating bacteria, strains CS98 and CS402, were isolated from soil by a radioactive autoradiographic method using 137Cs. These strains displayed the rod-coccus growth cycle and contained mesodiaminopimelic acid, mycolic acids, and tuberculostearic acids. The major menaquinone of CS98 was MK-8(H2). On the basis of these characteristics, strain CS98 was identified as Rhodococcus erythropolis and strain CS402 was classified in the genus Rhodococcus. The maximum values of cesium removal efficiencies in the liquid culture containing 10 mumol of cesium per liter for strains CS98 and CS402 were 90 and 47%, respectively. The maximum cesium contents in strains CS98 and CS402