Science.gov

Sample records for accumulation rates show

  1. Determining Greenland Ice Sheet Accumulation Rates from Radar Remote Sensing

    NASA Technical Reports Server (NTRS)

    Jezek, Kenneth C.

    2002-01-01

    An important component of NASA's Program for Arctic Regional Climate Assessment (PARCA) is a mass balance investigation of the Greenland Ice Sheet. The mass balance is calculated by taking the difference between the areally Integrated snow accumulation and the net ice discharge of the ice sheet. Uncertainties in this calculation Include the snow accumulation rate, which has traditionally been determined by interpolating data from ice core samples taken from isolated spots across the ice sheet. The sparse data associated with ice cores juxtaposed against the high spatial and temporal resolution provided by remote sensing , has motivated scientists to investigate relationships between accumulation rate and microwave observations as an option for obtaining spatially contiguous estimates. The objective of this PARCA continuation proposal was to complete an estimate of surface accumulation rate on the Greenland Ice Sheet derived from C-band radar backscatter data compiled in the ERS-1 SAR mosaic of data acquired during, September-November, 1992. An empirical equation, based on elevation and latitude, is used to determine the mean annual temperature. We examine the influence of accumulation rate, and mean annual temperature on C-band radar backscatter using a forward model, which incorporates snow metamorphosis and radar backscatter components. Our model is run over a range of accumulation and temperature conditions. Based on the model results, we generate a look-up table, which uniquely maps the measured radar backscatter, and mean annual temperature to accumulation rate. Our results compare favorably with in situ accumulation rate measurements falling within our study area.

  2. A flight experiment to determine GPS photochemical contamination accumulation rates

    NASA Technical Reports Server (NTRS)

    Tribble, A. C.; Haffner, J. W.

    1990-01-01

    It was recently suggested that photochemically deposited contamination, originating from volatiles outgassed by a spacecraft, may be responsible for the anomalous degradation in power seen on the GPS Block 1 vehicles. In an attempt to confirm, or deny, the photochemical deposition rates predicted, a study was undertaken to design a flight experiment to be incorporated on the GPS vehicles currently in production. The objective was to develop an inexpensive, light weight instrument package that would give information on the contamination levels within a few months of launch. Three types of apparatus were studied, Quartz Crystal Microbalances, (QCM's), modified solar cells, and calorimeters. A calorimeter was selected due primarily to its impact on the production schedule of the GPS vehicles. An analysis of the sensitivity of the final design is compared to the predicted contamination accumulation rates in order to determine how long after launch it will take the experiment to show the effects of photochemical contamination.

  3. Determining Greenland Ice Sheet Accumulation Rates from Radar Remote Sensing

    NASA Technical Reports Server (NTRS)

    Jezek, Kenneth C.

    2001-01-01

    An important component of NASA's Program for Arctic Regional Climate Assessment (PARCA) is a mass balance investigation of the Greenland Ice Sheet. The mass balance is calculated by taking the difference between the snow accumulation and the ice discharge of the ice sheet. Uncertainties in this calculation include the snow accumulation rate, which has traditionally been determined by interpolating data from ice core samples taken throughout the ice sheet. The sparse data associated with ice cores, coupled with the high spatial and temporal resolution provided by remote sensing, have motivated scientists to investigate relationships between accumulation rate and microwave observations.

  4. Temperature-dependence of biomass accumulation rates during secondary succession.

    PubMed

    Anderson, Kristina J; Allen, Andrew P; Gillooly, James F; Brown, James H

    2006-06-01

    Rates of ecosystem recovery following disturbance affect many ecological processes, including carbon cycling in the biosphere. Here, we present a model that predicts the temperature dependence of the biomass accumulation rate following disturbances in forests. Model predictions are derived based on allometric and biochemical principles that govern plant energetics and are tested using a global database of 91 studies of secondary succession compiled from the literature. The rate of biomass accumulation during secondary succession increases with average growing season temperature as predicted based on the biochemical kinetics of photosynthesis in chloroplasts. In addition, the rate of biomass accumulation is greater in angiosperm-dominated communities than in gymnosperm-dominated ones and greater in plantations than in naturally regenerating stands. By linking the temperature-dependence of photosynthesis to the rate of whole-ecosystem biomass accumulation during secondary succession, our model and results provide one example of how emergent, ecosystem-level rate processes can be predicted based on the kinetics of individual metabolic rate.

  5. Tumor-Targeted HPMA Copolymer-(RGDfK)-(CHX-A″-DTPA) Conjugates Show Increased Kidney Accumulation

    PubMed Central

    Borgman, Mark P.; Coleman, Tomika; Kolhatkar, Rohit B.; Geyser-Stoops, Sandra; Line, Bruce R.; Ghandehari, Hamidreza

    2008-01-01

    N-(2-hydroxypropyl) methacrylamide (HPMA) copolymer-RGDfK conjugates targeting the αvβ3 integrin have shown increased accumulation in solid tumors and promise for selective delivery of radiotherapeutics to sites of angiogenesis- or tumor-expressed αvβ3 integrin. An unresolved issue in targeting radiotherapeutics to solid tumors is toxicity to non-target organs. To reduce toxicity of radiolabeled conjugates, we have synthesized HPMA copolymer-RGDfK conjugates with varying molecular weight and charge content to help identify a polymeric structure that maximizes tumor accumulation while rapidly clearing from non-targeted organs. Endothelial cell binding studies showed that copolymer conjugates of approximately 43, 20 and 10 kD actively bind to the αvβ3 integrin. Scintigraphic images showed rapid clearance of indium-111 radiolabeled conjugates from the blood pool and high kidney accumulation within 1 h in tumor bearing mice. Biodistribution data confirms images with high accumulation in kidney (max 210% ID/g for 43 kD conjugate) and lower tumor accumulation (max 1.8% ID/g for 43kD conjugate). While actively binding to the αvβ3 integrin in vitro, HPMA copolymer-RGDfK conjugates with increased negative charge through increased CHX-A″-DTPA chelator content in the side chains causes increased kidney accumulation with a loss of tumor binding in vivo. PMID:18687371

  6. Annual Greenland Accumulation Rates (2009-2012) from Airborne Snow Radar

    NASA Technical Reports Server (NTRS)

    Koenig, Lora S.; Ivanoff, Alvaro; Alexander, Patrick M.; MacGregor, Joseph A.; Fettweis, Xavier; Panzer, Ben; Paden, John D.; Forster, Richard R.; Das, Indrani; McConnell, Joseph R.; Tedesco, Marco; Leuschen, Carl; Gogineni, Prasad

    2016-01-01

    Contemporary climate warming over the Arctic is accelerating mass loss from the Greenland Ice Sheet through increasing surface melt, emphasizing the need to closely monitor its surface mass balance in order to improve sea-level rise predictions. Snow accumulation is the largest component of the ice sheet's surface mass balance, but in situ observations thereof are inherently sparse and models are difficult to evaluate at large scales. Here, we quantify recent Greenland accumulation rates using ultra-wideband (2-6.5 gigahertz) airborne snow radar data collected as part of NASA's Operation IceBridge between 2009 and 2012. We use a semi-automated method to trace the observed radiostratigraphy and then derive annual net accumulation rates for 2009-2012. The uncertainty in these radar-derived accumulation rates is on average 14 percent. A comparison of the radarderived accumulation rates and contemporaneous ice cores shows that snow radar captures both the annual and longterm mean accumulation rate accurately. A comparison with outputs from a regional climate model (MAR - Modele Atmospherique Regional for Greenland and vicinity) shows that this model matches radar-derived accumulation rates in the ice sheet interior but produces higher values over southeastern Greenland. Our results demonstrate that snow radar can efficiently and accurately map patterns of snow accumulation across an ice sheet and that it is valuable for evaluating the accuracy of surface mass balance models.

  7. Annual Greenland accumulation rates (2009-2012) from airborne snow radar

    NASA Astrophysics Data System (ADS)

    Koenig, Lora S.; Ivanoff, Alvaro; Alexander, Patrick M.; MacGregor, Joseph A.; Fettweis, Xavier; Panzer, Ben; Paden, John D.; Forster, Richard R.; Das, Indrani; McConnell, Joesph R.; Tedesco, Marco; Leuschen, Carl; Gogineni, Prasad

    2016-08-01

    Contemporary climate warming over the Arctic is accelerating mass loss from the Greenland Ice Sheet through increasing surface melt, emphasizing the need to closely monitor its surface mass balance in order to improve sea-level rise predictions. Snow accumulation is the largest component of the ice sheet's surface mass balance, but in situ observations thereof are inherently sparse and models are difficult to evaluate at large scales. Here, we quantify recent Greenland accumulation rates using ultra-wideband (2-6.5 GHz) airborne snow radar data collected as part of NASA's Operation IceBridge between 2009 and 2012. We use a semiautomated method to trace the observed radiostratigraphy and then derive annual net accumulation rates for 2009-2012. The uncertainty in these radar-derived accumulation rates is on average 14 %. A comparison of the radar-derived accumulation rates and contemporaneous ice cores shows that snow radar captures both the annual and long-term mean accumulation rate accurately. A comparison with outputs from a regional climate model (MAR) shows that this model matches radar-derived accumulation rates in the ice sheet interior but produces higher values over southeastern Greenland. Our results demonstrate that snow radar can efficiently and accurately map patterns of snow accumulation across an ice sheet and that it is valuable for evaluating the accuracy of surface mass balance models.

  8. A 2000-year annual record of snow accumulation rates for Law Dome, East Antarctica

    NASA Astrophysics Data System (ADS)

    Roberts, J.; Plummer, C.; Vance, T.; van Ommen, T.; Moy, A.; Poynter, S.; Treverrow, A.; Curran, M.; George, S.

    2015-05-01

    Accurate high-resolution records of snow accumulation rates in Antarctica are crucial for estimating ice sheet mass balance and subsequent sea level change. Snowfall rates at Law Dome, East Antarctica, have been linked with regional atmospheric circulation to the mid-latitudes as well as regional Antarctic snowfall. Here, we extend the length of the Law Dome accumulation record from 750 years to 2035 years, using recent annual layer dating that extends to 22 BCE. Accumulation rates were calculated as the ratio of measured to modelled layer thicknesses, multiplied by the long-term mean accumulation rate. The modelled layer thicknesses were based on a power-law vertical strain rate profile fitted to observed annual layer thickness. The periods 380-442, 727-783 and 1970-2009 CE have above-average snow accumulation rates, while 663-704, 933-975 and 1429-1468 CE were below average, and decadal-scale snow accumulation anomalies were found to be relatively common (74 events in the 2035-year record). The calculated snow accumulation rates show good correlation with atmospheric reanalysis estimates, and significant spatial correlation over a wide expanse of East Antarctica, demonstrating that the Law Dome record captures larger-scale variability across a large region of East Antarctica well beyond the immediate vicinity of the Law Dome summit. Spectral analysis reveals periodicities in the snow accumulation record which may be related to El Niño-Southern Oscillation (ENSO) and Interdecadal Pacific Oscillation (IPO) frequencies.

  9. Holocene and recent sediment accumulation rates in southern Lake Michigan

    USGS Publications Warehouse

    Colman, Steven M.; King, J.W.; Jones, Glenn A.; Reynolds, R.L.; Bothner, Michael H.

    2000-01-01

    Rates of sediment accumulation in Lake Michigan are a key component of its geologic history and provide important data related to societal concerns such as shoreline erosion and the fate of anthropogenic pollutants. Previous attempts to reconstruct Holocene rates of sediment accumulation in Lake Michigan, as well as in the other Laurentian Great Lakes, have been bedeviled by the effect of refractory terrestrial material on radiocarbon ages from total organic carbon samples of lake sediments. AMS radiocarbon ages on small samples of biogenic carbonate (ostracodes and mollusks) in Lake Michigan provide accurate Holocene ages. The present bicarbonate reservoir effect is estimated from shells of mollusks collected live before atmospheric nuclear testing to be 250 yr. From paired samples of biogenic carbonate and terrestrial macrofossils, the past reservoir effect is thought to be less than 500 yr. The radiocarbon ages indicate a distinct decrease in sediment accumulation rates throughout the southern basin of Lake Michigan at about 5 ka, about the time when lake level stabilized at the Nipissing level after rising rapidly for several thousand years. Average rates of sediment accumulation for the historic period (the last 150 yr) can be estimated from radioisotopes (210Pb and 137Cs), pollen stratigraphy, and changes in sediment properties associated with human activity. Multiple methods are necessary because at any given site, problems arise in the assumptions or applicability of one or more methods. In general, the mass accumulation calculations suggest that sediments were deposited 4 to 11 times faster in the historic period than before human settlement. The character of the sediment did not change in a dramatic way, but sediment magnetic properties suggest shifts in the sources of sediment. The data suggest that some of the changes in sources and (or) character of the sediment occurred just before human settlement and were probably related to climatic changes

  10. A two thousand year annual record of snow accumulation rates for Law Dome, East Antarctica

    NASA Astrophysics Data System (ADS)

    Roberts, J.; Plummer, C.; Vance, T.; van Ommen, T.; Moy, A.; Poynter, S.; Treverrow, A.; Curran, M.; George, S.

    2014-11-01

    Accurate high resolution records of snow accumulation rates in Antarctica are crucial for estimating ice sheet mass balance and subsequent sea level change. Snowfall rates at Law Dome, East Antarctica, have been linked with regional atmospheric circulation to mid-latitudes as well as regional Antarctic snowfall. Here, we extend the Law Dome accumulation record from 750 to 2035 years, using recent annual layer dating that extends to AD -22. Accumulation rates were calculated as the ratio of measured to modelled layer thicknesses, multiplied by the long term mean accumulation rate. The modelled layer thicknesses were based on a power law vertical strain rate profile fitted to observed annual layer thickness. The periods AD 380-442, AD 727-783 and AD 1970-2009 have above average snow accumulation rates, while AD 663-704, AD 933-975 and AD 1429-1468 were below average. The calculated snow accumulation rates show good correlation with atmospheric reanalysis estimates, and significant spatial correlation over a wide expanse of East Antarctica, demonstrating that the Law Dome record captures larger scale variability across a large region of East Antarctica well beyond the immediate vicinity of the Law Dome summit. Spectral analysis reveals periodicities in the snow accumulation record which may be related to ENSO and Interdecadal Pacific Oscillation frequencies.

  11. Comparison of elemental accumulation rates between ferromanganese deposits and sediments in the South Pacific Ocean

    USGS Publications Warehouse

    Kraemer, T.; Schornick, J.C.

    1974-01-01

    Rates of accumulation of Fe and Mn, as well as Cu, Ni, Co, Pb, Zn, Hg, U and Th have been determined for five ferromanganese deposits from four localities in the South Pacific Ocean. Manganese is accumulating in nodules and crusts at a rate roughly equivalent to that found to be accumulating in sediments in the same area. Iron shows a deficiency in accumulation in nodules and crusts with respect to sediments, especially near the continents, but also in the central and south-central Pacific. Copper is accumulating in nodules and crusts at a rate one order of magnitude less than the surrounding sediments. This is interpreted as meaning that most of the Mn is supplied as an authigenic phase to both sediments and nodules while Fe is supplied mostly by ferromanganese micro-nodules and by detrital and adsorbed components of sediments; and Cu is enriched in sediments relative to nodules and crusts most probably through biological activity. ?? 1974.

  12. Report to the Nation shows cancer death rates dropping

    Cancer.gov

    The Annual Report to the Nation on the Status of Cancer, 1975–2009, shows that overall cancer death rates continued to decline in the United States among both men and women, among all major racial and ethnic groups, and for all of the most common cancer s

  13. Rate of tree carbon accumulation increases continuously with tree size

    USGS Publications Warehouse

    Stephenson, N.L.; Das, A.J.; Condit, R.; Russo, S.E.; Baker, P.J.; Beckman, N.G.; Coomes, D.A.; Lines, E.R.; Morris, W.K.; Rüger, N.; Álvarez, E.; Blundo, C.; Bunyavejchewin, S.; Chuyong, G.; Davies, S.J.; Duque, Á.; Ewango, C.N.; Flores, O.; Franklin, J.F.; Grau, H.R.; Hao, Z.; Harmon, M.E.; Hubbell, S.P.; Kenfack, D.; Lin, Y.; Makana, J.-R.; Malizia, A.; Malizia, L.R.; Pabst, R.J.; Pongpattananurak, N.; Su, S.-H.; Sun, I-F.; Tan, S.; Thomas, D.; van Mantgem, P.J.; Wang, X.; Wiser, S.K.; Zavala, M.A.

    2014-01-01

    Forests are major components of the global carbon cycle, providing substantial feedback to atmospheric greenhouse gas concentrations. Our ability to understand and predict changes in the forest carbon cycle—particularly net primary productivity and carbon storage - increasingly relies on models that represent biological processes across several scales of biological organization, from tree leaves to forest stands. Yet, despite advances in our understanding of productivity at the scales of leaves and stands, no consensus exists about the nature of productivity at the scale of the individual tree, in part because we lack a broad empirical assessment of whether rates of absolute tree mass growth (and thus carbon accumulation) decrease, remain constant, or increase as trees increase in size and age. Here we present a global analysis of 403 tropical and temperate tree species, showing that for most species mass growth rate increases continuously with tree size. Thus, large, old trees do not act simply as senescent carbon reservoirs but actively fix large amounts of carbon compared to smaller trees; at the extreme, a single big tree can add the same amount of carbon to the forest within a year as is contained in an entire mid-sized tree. The apparent paradoxes of individual tree growth increasing with tree size despite declining leaf-level and stand-level productivity can be explained, respectively, by increases in a tree’s total leaf area that outpace declines in productivity per unit of leaf area and, among other factors, age-related reductions in population density. Our results resolve conflicting assumptions about the nature of tree growth, inform efforts to understand and model forest carbon dynamics, and have additional implications for theories of resource allocation and plant senescence.

  14. Rate of tree carbon accumulation increases continuously with tree size.

    PubMed

    Stephenson, N L; Das, A J; Condit, R; Russo, S E; Baker, P J; Beckman, N G; Coomes, D A; Lines, E R; Morris, W K; Rüger, N; Alvarez, E; Blundo, C; Bunyavejchewin, S; Chuyong, G; Davies, S J; Duque, A; Ewango, C N; Flores, O; Franklin, J F; Grau, H R; Hao, Z; Harmon, M E; Hubbell, S P; Kenfack, D; Lin, Y; Makana, J-R; Malizia, A; Malizia, L R; Pabst, R J; Pongpattananurak, N; Su, S-H; Sun, I-F; Tan, S; Thomas, D; van Mantgem, P J; Wang, X; Wiser, S K; Zavala, M A

    2014-03-06

    Forests are major components of the global carbon cycle, providing substantial feedback to atmospheric greenhouse gas concentrations. Our ability to understand and predict changes in the forest carbon cycle--particularly net primary productivity and carbon storage--increasingly relies on models that represent biological processes across several scales of biological organization, from tree leaves to forest stands. Yet, despite advances in our understanding of productivity at the scales of leaves and stands, no consensus exists about the nature of productivity at the scale of the individual tree, in part because we lack a broad empirical assessment of whether rates of absolute tree mass growth (and thus carbon accumulation) decrease, remain constant, or increase as trees increase in size and age. Here we present a global analysis of 403 tropical and temperate tree species, showing that for most species mass growth rate increases continuously with tree size. Thus, large, old trees do not act simply as senescent carbon reservoirs but actively fix large amounts of carbon compared to smaller trees; at the extreme, a single big tree can add the same amount of carbon to the forest within a year as is contained in an entire mid-sized tree. The apparent paradoxes of individual tree growth increasing with tree size despite declining leaf-level and stand-level productivity can be explained, respectively, by increases in a tree's total leaf area that outpace declines in productivity per unit of leaf area and, among other factors, age-related reductions in population density. Our results resolve conflicting assumptions about the nature of tree growth, inform efforts to undertand and model forest carbon dynamics, and have additional implications for theories of resource allocation and plant senescence.

  15. Sequential extracts of human bone show differing collagen synthetic rates.

    PubMed

    Babraj, J; Cuthbertson, D J; Rickhuss, P; Meier-Augenstein, W; Smith, K; Bohé, J; Wolfe, R R; Gibson, J N A; Adams, C; Rennie, M J

    2002-04-01

    Type I collagen is the major bone protein. Little is known quantitatively about human bone collagen synthesis in vivo, despite its importance for the understanding of bone formation and turnover. Our aim was to develop a method that could be used for the physiological and pathophysiological investigation of human bone collagen synthesis. We have carried out preliminary studies in patients undergoing hip replacement and in pigs to validate the use of the flooding dose method using (13)C- or (15)N-labelled proline and we have now refined our techniques to allow them to be used in a normal clinical or physiological setting. The results show that the application of a flooding dose causes bone free-proline labelling to equilibrate with that of blood in pigs and human beings, so that only 150 mg of bone will provide enough sample to prepare and measure the labelling of three fractions of bone collagen (dissolved in NaCl, acetic acid and pepsin/acetic acid) which have the same relative labelling (1.0:0.43:0.1) as measured by GC-combustion-isotope ratio MS. The rates of incorporation were substantially faster than in skeletal muscle samples taken at the same time. The results suggest that different fractions of human bone collagen turnover at markedly higher rates than had been previously considered. This approach should allow us to discover how growth and development, food, activity and drugs affect bone collagen turnover and to measure the effects on it of ageing and bone disease.

  16. Primary ovarian carcinoid tumor showing unusual histology and nuclear accumulation of β-catenin.

    PubMed

    Kim, Hyun-Soo; Yoon, Gun; Jang, Hye-In; Song, Sang Yong; Kim, Byoung-Gie

    2015-01-01

    Carcinoid tumor of the ovary is uncommon. We herein report a very rare case of primary ovarian carcinoid tumor with aggressive histology and an unusual immunophenotype. A 21-year-old woman presented with a palpable abdominal mass. Computed tomographic scan revealed a large, extensively necrotic solid mass in the left ovary. The patient underwent a left salpingo-oophorectomy. Grossly, the left adnexa showed a large, vaguely lobulated ovarian tumor measuring 22×15×13 cm. Histologically, the tumor had a readily identifiable neuroendocrine growth pattern, but some areas showed solid growth pattern associated with mild nuclear pleomorphism and multiple foci of punctate necrosis. Furthermore, mitotic figures were recognized in 8 per 10 high-power fields, and a few foci of large coagulative tumor necrosis were also noted. In addition, the tumor tissue exhibited uniform, strong nuclear β-catenin immunoreactivity, indicating the nuclear accumulation of β-catenin in the individual tumor cells. In summary, we described the first case of primary ovarian carcinoid tumor with loss of neuroendocrine growth pattern, increased mitotic activity and large areas of coagulative tumor necrosis. According to the WHO classification of pulmonary carcinoid tumor, this case may be classified as "atypical" carcinoid. However, currently, no primary ovarian atypical carcinoid exists in the classification system. Due to its rarity, there are no established diagnostic criteria and clinical data on patient outcomes for ovarian carcinoid tumors with aggressive histology. Additional reports are clearly necessary. We also showed for the first time the nuclear accumulation of β-catenin in carcinoid tumor cells, suggestive of a role for β-catenin in the tumorigenesis of ovarian atypical carcinoid tumor or its aggressive histology.

  17. Large scale spatial variation of accumulation rate across ice promontory in coastal Dronning Maud Land, Antarctica.

    NASA Astrophysics Data System (ADS)

    Callens, Denis; Matsuoka, Kenichi; Drews, Reinhard; Pattyn, Frank

    2013-04-01

    Ice rises are known to play a key role on ice shelf dynamics. By buttressing the flow, they constrain the flow of ice from the continent toward the ocean. However, since they are small hills surrounded by extremely flat area, they also play a role on atmospheric circulation. However, this impact is relatively unknown. Here, we show evidence that ice rises play a significant role on the wind redistribution of the snow. We report observations of persistent features observed all around the coast of Dronning Maud Land (DML). By analyzing radio-echo sounding data, we identified internal reflection horizons assumed to be isochronous. These layers show a remarkable variability in layer depth at both sides of the ridge, pointing to variability in surface accumulation rates. We show that a strong gradient of accumulation rate exist across, at least, 5 different ice rises in DML : Halvfarryggen Ice Rise nearby Ekstromisen (7°W), 2 ice rises into the Fimbulisen (2°E) and 2 ice rises within the Roi Baudoin Ice Shelf (25°E, Derwael & FranKenny Ice Rise). We used deepness of radar reflector as a proxy of the accumulation rate as long as we removed the influence of ice dynamics. All collected data (both low and high frequency) all show the similar persistent gradient in accumulation rate. Comparison of accumulation rate distribution and meteorological data shows that accumulation rate is twice as high on the wind side of the ridge compared to the lee side, which makes ice rise topography playing a significant role in snow redistribution. This feature is important in term of ice coring and paleoclimatic reconstruction of on time scales of 2 to 20k years.

  18. Radiocarbon Dating, Chronologic Framework, and Changes in Accumulation Rates of Holocene Estuarine Sediments from Chesapeake Bay

    NASA Astrophysics Data System (ADS)

    Colman, Steven M.; Baucom, Pattie C.; Bratton, John F.; Cronin, Thomas M.; McGeehin, John P.; Willard, Debra; Zimmerman, Andrew R.; Vogt, Peter R.

    2002-01-01

    Rapidly accumulating Holocene sediments in estuaries commonly are difficult to sample and date. In Chesapeake Bay, we obtained sediment cores as much as 20 m in length and used numerous radiocarbon ages measured by accelerator mass spectrometry methods to provide the first detailed chronologies of Holocene sediment accumulation in the bay. Carbon in these sediments is a complex mixture of materials from a variety of sources. Analyses of different components of the sediments show that total organic carbon ages are largely unreliable, because much of the carbon (including coal) has been transported to the bay from upstream sources and is older than sediments in which it was deposited. Mollusk shells (clams, oysters) and foraminifera appear to give reliable results, although reworking and burrowing are potential problems. Analyses of museum specimens collected alive before atmospheric nuclear testing suggest that the standard reservoir correction for marine samples is appropriate for middle to lower Chesapeake Bay. The biogenic carbonate radiocarbon ages are compatible with 210Pb and 137Cs data and pollen stratigraphy from the same sites. Post-settlement changes in sediment transport and accumulation is an important environmental issue in many estuaries, including the Chesapeake. Our data show that large variations in sediment mass accumulation rates occur among sites. At shallow water sites, local factors seem to control changes in accumulation rates with time. Our two relatively deep-water sites in the axial channel of the bay have different long-term average accumulation rates, but the history of sediment accumulation at these sites appears to reflect overall conditions in the bay. Mass accumulation rates at the two deep-water sites rapidly increased by about fourfold coincident with widespread land clearance for agriculture in the Chesapeake watershed.

  19. Radiocarbon dating, chronologic framework, and changes in accumulation rates of holocene estuarine sediments from Chesapeake Bay

    USGS Publications Warehouse

    Colman, Steven M.; Baucom, P.C.; Bratton, J.F.; Cronin, T. M.; McGeehin, J.P.; Willard, D.; Zimmerman, A.R.; Vogt, P.R.

    2002-01-01

    Rapidly accumulating Holocene sediments in estuaries commonly are difficult to sample and date. In Chesapeake Bay, we obtained sediment cores as much as 20 m in length and used numerous radiocarbon ages measured by accelarator mass spectrometry methods to provide the first detailed chronologies of Holocene sediment accumulation in the bay. Carbon in these sediments is a complex mixture of materials from a variety of sources. Analyses of different components of the sediments show that total organic carbon ages are largely unreliable, because much of the carbon (including coal) has been transported to the bay from upstream sources and is older than sediments in which it was deposited. Mollusk shells (clams, oysters) and foraminifera appear to give reliable results, although reworking and burrowing are potential problems. Analyses of museum specimens collected alive before atmospheric nuclear testing suggest that the standard reservoir correction for marine samples is appropriate for middle to lower Chesapeake Bay. The biogenic carbonate radiocarbon ages are compatible with 210 Pb and 137 Cs data and pollen stratigraphy from the same sites. Post-settlement changes in sediment transport and accumulation is an important environmental issue in many estuaries, including the Chesapeake. Our data show that large variations in sediment mass accumulation rates occur among sites. At shallow water sites, local factors seem to control changes in accumulation rates with time. Our two relatively deep-water sites in the axial channel of the bay have different long-term average accumulation rates, but the history of sediment accumulation at these sites appears to reflect overall conditions in the bay. Mass accumulation rates at the two deep-water sites rapidly increased by about fourfold coincident with widespread land clearance for agriculture in the Chesapeake watershed.

  20. Two chitinase-like proteins abundantly accumulated in latex of mulberry show insecticidal activity

    PubMed Central

    2010-01-01

    Background Plant latex is the cytoplasm of highly specialized cells known as laticifers, and is thought to have a critical role in defense against herbivorous insects. Proteins abundantly accumulated in latex might therefore be involved in the defense system. Results We purified latex abundant protein a and b (LA-a and LA-b) from mulberry (Morus sp.) and analyzed their properties. LA-a and LA-b have molecular masses of approximately 50 and 46 kDa, respectively, and are abundant in the soluble fraction of latex. Western blotting analysis suggested that they share sequence similarity with each other. The sequences of LA-a and LA-b, as determined by Edman degradation, showed chitin-binding domains of plant chitinases at the N termini. These proteins showed small but significant chitinase and chitosanase activities. Lectin RCA120 indicated that, unlike common plant chitinases, LA-a and LA-b are glycosylated. LA-a and LA-b showed insecticidal activities when fed to larvae of the model insect Drosophila melanogaster. Conclusions Our results suggest that the two LA proteins have a crucial role in defense against herbivorous insects, possibly by hydrolyzing their chitin. PMID:20109180

  1. Atmospheric Pb and Ti accumulation rates from Sphagnum moss: dependence upon plant productivity.

    PubMed

    Kempter, H; Krachler, M; Shotyk, W

    2010-07-15

    The accumulation rates of atmospheric Pb and Ti were obtained using the production rates of Sphagnum mosses collected in four ombrotrophic bogs from two regions of southern Germany: Upper Bavaria (Oberbayern, OB) and the Northern Black Forest (Nordschwarzwald, NBF). Surfaces of Sphagnum carpets were marked with plastic mesh and one year later the production of plant matter was harvested. Metal concentrations were determined in acid digests using sector field ICP-MS employing well established analytical procedures. Up to 12 samples (40 x 40 cm) were collected per site, and 6-10 sites were investigated per bog. Variations within a given sampling site were in the range 2.3-4x for Pb concentrations, 1.8-2.5x for Ti concentrations, 3-8.3x for Pb/Ti, 5.6-7.8x for Pb accumulation rates, and 2.3-6.4x for Ti accumulation rates. However, the median values of these parameters for the sites (6-10 per bog) were quite consistent. The mosses from the bogs in NBF exhibited significantly greater productivity (187-202 g m(-2) a(-1)) compared to the OB peat bogs (71-91 g m(-2) a(-1)), and these differences had a pronounced effect on the Pb and Ti accumulation rates. Highly productive mosses showed no indication of a "dilution effect" of Pb or Ti concentrations, suggesting that more productive plants were simply able to accumulate more particles from the air. The median rates of net Pb accumulation by the mosses are in excellent agreement with the fluxes obtained by direct atmospheric measurements at nearby monitoring stations in both regions (EMEP and MAPESI data).

  2. Effect of accumulation rate on water stable isotopes of near-surface snow in inland Antarctica

    NASA Astrophysics Data System (ADS)

    Hoshina, Yu; Fujita, Koji; Nakazawa, Fumio; Iizuka, Yoshinori; Miyake, Takayuki; Hirabayashi, Motohiro; Kuramoto, Takayuki; Fujita, Shuji; Motoyama, Hideaki

    2014-01-01

    changes in water stable isotopes in polar firn were investigated at three sites characterized by different accumulation rates along the East Antarctic ice divide near Dome Fuji. Water stable isotopes, major ion concentrations, and tritium contents of three 2-4 m deep pits were measured at high resolution (2 cm). Temporally, the snow pits cover the past 50 years with snow accumulation rates in the range of 29-41 kg m-2 a-1 around Dome Fuji. Oxygen isotopic profiles in the three pits do not show annual fluctuations, but instead exhibit multiyear cycles. These multiyear cycles are lower in frequency at Dome Fuji as compared with the other two sites. Peaks of water stable isotopes in the multiyear cycles correspond to some ion concentration minima in the pits, although such relationships are not observed in coastal regions. We propose that the extremely low accumulation environment keeps the snow layer at the near surface, which result in postdepositional modifications of isotopic signals by processes such as ventilation and vapor condensation-sublimation. We estimate that oxygen isotopic ratios could be modified by >10‰ and that the original seasonal cycle could be completely overprinted under the accumulation conditions at Dome Fuji. Moreover, stake measurements at Dome Fuji suggest that the large variability in snow accumulation rate is the cause of the multiyear cycles.

  3. Accumulation rates during 1311-2011 CE in North Central Greenland derived from air-borne radar data

    NASA Astrophysics Data System (ADS)

    Karlsson, Nanna; Eisen, Olaf; Dahl-Jensen, Dorthe; Freitag, Johannes; Kipfstuhl, Sepp; Lewis, Cameron; Nielsen, Lisbeth; Paden, John; Winter, Anna; Wilhelms, Frank

    2016-11-01

    Radar-detected internal layering contains information on past accumulation rates and patterns. In this study, we assume that the radar layers are isochrones, and use the layer stratigraphy in combination with ice-core measurements and numerical methods to retrieve accumulation information for the northern part of central Greenland. Measurements of the dielectric properties of an ice core from the NEEM (North Greenland Eemian Ice Drilling) site, allow for correlation of the radar layers with volcanic horizons to obtain an accurate age of the layers. We obtain accumulation patterns averaged over 100 a for the period 1311-2011. Our results show a clear trend of high accumulation rates west of the ice divide and low accumulation rates east of the ice divide. At the NEEM site the accumulation pattern is persistent during our study period and only small temporal variations occur in the accumulation rate. However, from approximately 200 km south of the NEEM drill site, the accumulation rate shows temporal variations based on our centennial averages. We attribute this variation to shifts in the location of the high-low accumulation boundary that usually is aligned with the ice divide, but appears to have moved across the divide in the past.

  4. Wolman's Disease: A Microscopic and Biochemical Study Showing Accumulation of Ceroid and Esterified Cholesterol

    PubMed Central

    Lowden, J. A.; Barson, A. J.; Wentworth, P.

    1970-01-01

    A case of Wolman's disease is described in a female infant who died at 7 weeks of age. This rare familial disorder is characterized by bilateral adrenal calcification and the accumulation of esterified cholesterol in many tissues. For the first time large quantities of ceroid have been demonstrated in the liver, spleen, adrenals, lymph nodes and particularly within the lamina propria of the small intestine. It is postulated that there exists in these patients a decreased activity of cholesterol esterases. The accumulated cholesterol esters may then be oxidized to form ceroid. Since ceroid is quite impermeable, intestinal absorption is progressively impaired, leading ultimately to death. ImagesFIG. 1FIG. 2FIG. 3 PMID:5414926

  5. Holocene Carbon Accumulation Rates in the SPRUCE Bog Prior to Warming and Elevated CO2 Treatment

    NASA Astrophysics Data System (ADS)

    McFarlane, K. J.; Iversen, C. M.; Phillips, J. R.; Brice, D. J.; Hanson, P. J.

    2015-12-01

    In the Spruce and Peatland Responses Under Climatic and Environmental Change (SPRUCE) experiment warming and elevated CO2 treatments are being applied to an ombrotrophic spruce bog: the S1 Bog (S1) at Marcell Experimental Forest in northern Minnesota. To provide a historical context for recent and expected experimentally-induced changes in the bog's belowground carbon balance, we reconstructed historical carbon accumulation rates in peat using radiocarbon from 19 peat cores collected from randomly distributed SPRUCE plots. This unusually high number of cores allows us to assess spatial variability in age-depth profiles and accumulation rates across the SPRUCE study area within S1. This data, along with recent C flux measurements, show that the bog has been accumulating carbon for at least 12,0000 years and has continued to be a sink for atmospheric carbon of approximately 150 g C m-2 yr-1 in recent decades. Early Holocene accumulation rates are similar to those reported for other northern peatlands (approximately 25 g C m-2 yr-1), but apparent carbon accumulation decreased substantially around 3,000 years ago (to 5-15 g C m-2 yr-1) and stayed low until the last century. This decrease is considerably larger than that reported for other peatlands and is therefore unlikely to result only from cooling during the Holocene or bog succession. Although no charcoal has been found in peat at this site, evidence from a neighboring bog indicates a considerable amount of peat formed during this period was consumed by fire and it is possible that smoldering fires consumed peat, resulting in low apparent accumulation rates. Past droughts may have also contributed to observed trends by lowering the acrotelm/catotelm boundary, allowing for enhanced aerobic peat decomposition. This work provides important background information on spatial variability and carbon biogeochemistry that will aid in interpretation of climate change simulation experiments at S1.

  6. An integral method to estimate the moment accumulation rate on the Creeping Section of the San Andreas Fault

    NASA Astrophysics Data System (ADS)

    Tong, Xiaopeng; Sandwell, David T.; Smith-Konter, Bridget

    2015-10-01

    Moment accumulation rate (also referred to as moment deficit rate) is a fundamental quantity for evaluating seismic hazard. The conventional approach for evaluating moment accumulation rate of creeping faults is to invert for the slip distribution from geodetic measurements, although even with perfect data these slip-rate inversions are non-unique. In this study, we show that the slip-rate versus depth inversion is not needed because moment accumulation rate can be estimated directly from surface geodetic data. We propose an integral approach that uses dense geodetic observations from Interferometric Synthetic Aperture Radar (InSAR) and the Global Positioning System (GPS) to constrain the moment accumulation rate. The moment accumulation rate is related to the integral of the product of the along-strike velocity and the distance from the fault. We demonstrate our methods by studying the Creeping Section of the San Andreas fault observed by GPS and radar interferometry onboard the ERS and ALOS satellites. Along-strike variation of the moment accumulation rate is derived in order to investigate the degree of partial locking of the Creeping Section. The central Creeping Segment has a moment accumulation rate of 0.25-3.1 × 1015 Nm yr-1 km-1. The upper and lower bounds of the moment accumulation rates are derived based on the statistics of the noise. Our best-fitting model indicates that the central portion of the Creeping Section is accumulating seismic moment at rates that are about 5 per cent to 23 per cent of the fully locked Carrizo segment that will eventually be released seismically. A cumulative moment budget calculation with the historical earthquake catalogue (M > 5.5) since 1857 shows that the net moment deficit at present is equivalent to a Mw 6.3 earthquake.

  7. Metal accumulation rates in northwest Atlantic pelagic sediments

    NASA Astrophysics Data System (ADS)

    Thomson, J.; Carpenter, M. S. N.; Colley, S.; Wilson, T. R. S.; Elderfield, H.; Kennedy, H.

    1984-10-01

    Measurements of 230Th, 87Sr /86Sr and twenty-four metals were made on cores from the Nares Abyssal Plain. The sediment is characterized by slowly-accumulating (0.3-0.7 g/cm 2 10 3 yr) pelagic red clays and rapidly deposited grey clays transported by turbidity currents. Despite their colour differences and the enrichment of Mn, Fe, Cu, Co, Ni, Zn, V and, to a lesser degree, the rare earths in the red clays, Sr isotope evidence demonstrates that the clays have the same terrigenous origin. The excesses of metals in the red clays have been attributed to metal removal from the water column and a comparison with the grey clays has enabled the authigenic fluxes of metals to be estimated. The fluxes obtained are in the ranges 20-50 μmol/cm 2 10 3 yr for Mn and Fe, 0.1-0.4 μmol/cm 2 10 3 yr for Cu, Co, Ni, Zn, V, Sr and Ce, 10-20 nmol/cm 2 10 3 yr for La and Nd, and 0.5-3 nmol/cm 2 10 3 yr for Sm, Eu, Gd, Dy, Er and Yb. Authigenic fluxes of Y, Nb, Cr, Zr, Rb, U and Th were not resolvable. Fluxes appear to be near constant on the Plain but comparison with other areas shows that they are quite variable both between and within ocean basins. The chief factor controlling authigenic fluxes is the geochemical abundances of the elements but fractionation within both the transition element and rare earth series can be recognized from inter-element comparisons and from differences in fluxes between Atlantic and Pacific red clays corresponding to the oceanic reactivities of the elements.

  8. Sedimentology of Southwestern Roads region, U.S. Virgin Islands: origin and rate of sediment accumulation

    USGS Publications Warehouse

    Kindinger, Jack G.; Miller, Ronald J.; Holmes, Charles W.

    1983-01-01

    Sand deposits on southern insular shelf of St. Thomas, U.S. Virgin Islands, were investigated to determine their origin, environmental processes and accumulation rates. Sea-floor samples show that the sand has been derived (in situ) mainly from calcareous algae and molluscs. Zonation of the dominant sand producers is related to the present environmental setting; water depth has the greatest influence. Carbon-14 data (bulk sample) of cores indicate accumulation rates of slightly less than 1 mm/year for the last 5,000 years. Faunal studies show that the climate has remained constant over the past 5,000 years. The only changes in environmental conditions appear to have been an increase in water depth, changes in the patterns of water movement, and an increase in water temperature.

  9. Synthesis of passive microwave and radar altimeter data for estimating accumulation rates of polar snow

    NASA Technical Reports Server (NTRS)

    Davis, Curt H.

    1993-01-01

    In this paper, we compare dry-snow extinction coefficients derived from radar altimeter data with brightness temperature data from passive microwave measurements over a portion of the East Antarctic plateau. The comparison between the extinction coefficients and the brightness temperatures shows a strong negative correlation, where the correlation coefficients ranged from -0.87 to -0.95. The extinction coefficient of the dry polar snow decreases with increasing surface elevation, while the average brightness temperature increases with surface elevation. Our analysis shows that the observed trends are related to geographic variations in scattering coefficient of snow, which in turn are controlled by variations in surface temperature and snow accumulation rate. By combining information present in the extinction coefficient and brightness temperature data sets, we develop a model that can be used to obtain quantitative estimates of the accumulation rate of dry polar snow.

  10. Accumulation rates of Th-230, Pa-231, and some transition metals on the Bermuda Rise

    USGS Publications Warehouse

    Bacon, M.P.; Rosholt, J.N.

    1982-01-01

    Measurements of 238U, 234U, 230Th, 232Th, 231Pa, Mn, Fe, Co, Ni, Cu, and Zn were made on 23 samples from core GPC-5, a 29-m giant piston core from a water depth of 4583 m on the northeastern Bermuda Rise (33??41.2???N, 57??36.9???W). This area is characterized by rapid deposition of sediment transported by abyssal currents. Unsupported 230Th and 231Pa are present throughout the core but, because of large variations in the sedimentation rate, show marked departures from exponential decay with depth. The trend with depth of the 231Paex 230Thex ratio is consistent with the average accumulation rate of 36 cm/1000 y reported earlier on the basis of radiocarbon dating and CaCO3 stratigraphy. When expressed on a carbonate-free basis, concentrations of Mn, Co, Ni, Cu, Zn, 230Thex, and 231Paex all show cyclic variations positively correlated with those of CaCO3. The correlations can be explained by a model in which all of these constituents, including CaCO3, are supplied to the sediments from the water column at a constant rate. Concentration variations are controlled mainly by varying inputs of terrigenous detritus, with low inputs occurring during interglacials and high inputs during glacials. Relationships between the metal and 230Thex concentrations permit estimates of the rates at which the metals are removed to the sediment by scavenging from the water column. The results, in ??g/cm2-1000 y, are: 4300 ?? 1100 for Mn, 46 ?? 16 for Ni and 76 ?? 26 for Cu. These rates are somewhat larger than ocean-wide averages estimated by other methods, and the absolute rate of 230Th accumulation in GPC-5 averages about nine times higher than production in the overlying water column. This part of the Bermuda Rise and similar bottom-current deposits may act as important accumulators of elements scavenged from seawater. ?? 1982.

  11. Accumulation rates from central North Greenland during the past 700 year

    NASA Astrophysics Data System (ADS)

    Karlsson, Nanna B.; Eisen, Olaf; Nielsen, Lisbeth T.; Kipfstuhl, Sepp; Freitag, Johannes; Paden, John D.; Dahl-Jensen, Dorthe; Winter, Anna; Wilhelms, Frank

    2016-04-01

    A key variable when interpreting the evolution and mass loss from polar ice sheets is the input from the surface mass balance. While ice core records contain information on past accumulation rates, they always only provide information for a single location. Here, we present spatially distributed accumulation rates from central northern Greenland, specifically the area between the NEEM (North Greenland Eemian Drilling) and NGRIP (North Greenland Ice Core Project) ice core drill sites. The accumulation rates have been reconstructed using ice-penetrating radar, firn core measurements and inverse methods, and we are able to retrieve both spatial and temporal changes in the accumulation over an area spanning 300 km by 300 km. We investigate the stability of the accumulation pattern over the past several hundred years, and we address the question of how well the measured accumulation rates at the ice core sites capture the regional variations in accumulation. We find that while the accumulation rates at NEEM have been stable for the past 700 years, the NGRIP site has experienced fluctuations in accumulation rate. We interpret this as an indication of shifts in the dominating weather pattern over the ice divide in central North Greenland.

  12. Winter Insulation By Snow Accumulation in a Subarctic Treeline Ecosystem Increases Summer Carbon Cycling Rates

    NASA Astrophysics Data System (ADS)

    Parker, T.; Subke, J. A.; Wookey, P. A.

    2014-12-01

    The effect of snow accumulation on soil carbon and nutrient cycling is attracting substantial attention from researchers. We know that deeper snow accumulation caused by high stature vegetation increases winter microbial activity and therefore carbon and nitrogen flux rates. However, until now the effect of snow accumulation, by buffering winter soil temperature, on subsequent summer soil processes, has scarcely been considered. We carried out an experiment at an alpine treeline in subarctic Sweden in which soil monoliths, contained within PVC collars, were transplanted between forest (deep winter snow) and tundra heath (shallow winter snow). We measured soil CO2efflux over two growing seasons and quantified soil microbial biomass after the second winter. We showed that respiration rates of transplanted forest soil were significantly reduced compared with control collars (remaining in the forest) as a consequence of colder, but more variable, winter temperatures. We hypothesised that microbial biomass would be reduced in transplanted forests soils but found there was no difference compared to control. We therefore further hypothesised that the similarly sized microbial pool in the control is assembled differently to the transplant. We believe that the warmer winters in forests foster more active consortia of decomposer microbes as a result of different abiotic selection pressures. Using an ecosystem scale experimental approach, we have identified a mechanism that influences summer carbon cycling rates based solely on the amount of snow that accumulates the previous winter. We conclude that modification of snow depth as a consequence of changes in vegetation structure is an important mechanism influencing soil C stocks in ecosystems where snow persists for a major fraction of the year.

  13. Accumulation Rates of Trace Elements in the Cariaco Basin-A 20-kyr History of Seawater Chemistry and Global Climate

    NASA Astrophysics Data System (ADS)

    Piper, D. Z.; Dean, W. E.

    2002-12-01

    A sediment core from the Cariaco Basin on the Venezuelan continental shelf, which collected sediment as old as 20 kyr, was analyzed for its major-element-oxide and trace-element concen-trations. The elements can be partitioned between a siliciclastic, terrigenous-derived fraction and two seawater-derived fractions. The marine fractions are (1) a biogenic fraction represented by nutrient trace elements taken up mostly by phytoplankton in the photic zone, and (2) a hydroge-nous fraction derived from bottom water via adsorption and precipitation reactions. The present-day export of organic matter from the photic zone, redox conditions and advection of bottom water, and the flux of terrigenous debris into the basin are used to calculate current trace-element accu-mulation rates. The sums of calculated accumulation rates of Cd, Cu, Mo, Ni, V, and Zn show excellent agreement with their measured bulk rates of accumulation in the uppermost surface sediment. This agreement between current measured and calculated accumulation rates of trace elements supports a model of trace-element accumulation rates in the subsurface sediment that gives a 20-kyr history of upwelling into the photic zone, bottom-water advection, and sediment provenance. Extrema in the trace-element accumulation rates and interpreted hydrographic properties of the water column correspond to changes in eustatic sea level and global climate.

  14. Elevated rates of organic carbon, nitrogen, and phosphorus accumulation in a highly impacted mangrove wetland

    NASA Astrophysics Data System (ADS)

    Sanders, Christian J.; Eyre, Bradley D.; Santos, Isaac R.; Machado, Wilson; Luiz-Silva, Wanilson; Smoak, Joseph M.; Breithaupt, Joshua L.; Ketterer, Michael E.; Sanders, Luciana; Marotta, Humberto; Silva-Filho, Emmanoel

    2014-04-01

    The effect of nutrient enrichment on mangrove sediment accretion and carbon accumulation rates is poorly understood. Here we quantify sediment accretion through radionuclide tracers to determine organic carbon (OC), total nitrogen (TN), and total phosphorus (TP) accumulation rates during the previous 60 years in both a nutrient-enriched and a pristine mangrove forest within the same geomorphological region of southeastern Brazil. The forest receiving high nutrient loads has accumulated OC, TN, and TP at rates that are fourfold, twofold, and eightfold respectively, higher than those from the undisturbed mangrove. Organic carbon and TN stable isotopes (δ13C and δ15N) reflect an increased presence of organic matter (OM) originating with either phytoplankton, benthic algae, or another allochthonous source within the more rapidly accumulated sediments of the impacted mangrove. This suggests that the accumulation rate of OM in eutrophic mangrove systems may be enhanced through the addition of autochthonous and allochthonous nonmangrove material.

  15. Accumulator

    NASA Technical Reports Server (NTRS)

    Fenwick, J. R.; Karigan, G. H. (Inventor)

    1977-01-01

    An accumulator particularly adapted for use in controlling the pressure of a stream of fluid in its liquid phase utilizing the fluid in its gaseous phase was designed. The accumulator is characterized by a shell defining a pressure chamber having an entry throat for a liquid and adapted to be connected in contiguous relation with a selected conduit having a stream of fluid flowing through the conduit in its liquid phase. A pressure and volume stabilization tube, including an array of pressure relief perforations is projected into the chamber with the perforations disposed adjacent to the entry throat for accommodating a discharge of the fluid in either gaseous or liquid phases, while a gas inlet and liquid to gas conversion system is provided, the chamber is connected with a source of the fluid for continuously pressuring the chamber for controlling the pressure of the stream of liquid.

  16. Rates of biomass accumulation of North Carolina Piedmont forests

    SciTech Connect

    Peet, R.K.; Council, O.P.

    1980-01-01

    Recent work by Sharp et al. on the primary production of North Carolina vegetation has suggested that the average natural forest in North Carolina is unproductive relative to its potential as intensively managed forest, the difference being roughly 300%. This variation could be attributable to patterns of forest recovery after disturbance, to management practices, or even to species composition. These and other alternative hypotheses need to be tested in a careful and objective manner. The primary objectives of the present research project were twofold: (1) to use dimension analysis methods to develop a set of regression equations useful for evaluating the productivity (rate of solar energy fixation) and biomass (stored energy) of North Carolina piedmont forests; (2) to use the resulting equations to document patterns in and rates of change of forest production and biomass during forest recovery from disturbance. The first objective was divided into two component parts. First, the regression equations were developed. Second, the caloric content of trees was studied so as to allow conversion from biomass units (Kg/m/sup 2/) to energy units (Kcal/m/sup 2/). Section 2 of this report outlines the dimension analysis procedure, presents the resulting equations, and explains their use. The portion of the project assessing the caloric content of trees is presented in Section 3. The results of our second objective, the examination of changes in forest biomass and production, are presented in Section 4.

  17. Spatial variation in rates of carbon and nitrogen accumulation in a boreal bog

    SciTech Connect

    Ohlson, M.; Oekland, R.H.

    1998-12-01

    Although previous studies hint at the occurrence of substantial spatial variation in the accumulation rates of C and N in bogs, the extent to which rates may vary on high-resolution spatial and temporal scales is not known. A main reason for the lack of knowledge is that it is problematic to determine the precise age of peat at a given depth. The authors determined rates of carbon and nitrogen accumulation in the uppermost decimeters of a bog ecosystem using the pine method, which enables accurate dating of surface peat layers. They combined accumulation data with numerical and geostatistical analyses of the recent vegetation to establish the relationship between bog vegetation and rate of peat accumulation. Use of a laser technique for spatial positioning of 151 age-determined peat cores within a 20 x 20 m plot made it possible to give the first tine-scaled account of spatial and temporal variation in rates of mass, carbon, and nitrogen accumulation during the last century. Rates of C and N accumulation were highly variable at all spatial scales studied. For example, after {approximately}125 yr of peat growth, C and N accumulation varied by factors of five and four, respectively, from 25 to 125 g/dm{sup 2} for C, and from 0.7 to 2.6 g/dm{sup 2} for N. It takes 40 yr of peat accumulation before significant amounts of C are lost through decay. Hummocks built up by Sphagnum fuscum and S. rubellum were able to maintain average rates of C accumulation that exceed 2 g{center_dot}dm{sup {minus}2}{center_dot} yr{sup {minus}1} during 50 yr of growth. The authors argue that data on spatial variation in rates of C accumulation are necessary to understand the role of boreal peatlands in the greenhouse effect and global climate.

  18. Regulation of Activation-associated MicroRNA Accumulation Rates during Monocyte-to-macrophage Differentiation*

    PubMed Central

    Eigsti, Renee L.; Sudan, Bayan; Wilson, Mary E.; Graff, Joel W.

    2014-01-01

    Circulating monocytes recruited to tissues can differentiate into macrophages and adopt unique gene expression programs in response to environmental cues. We recently described the regulated expression of several microRNAs (miRNAs) in polarized human monocyte-derived macrophages (MDMs). Basal expression of these activation-associated miRNAs was low in monocytes relative to MDMs. As development occurs in the context of specific cellular environments, we hypothesized that the rate of miRNA accumulation would be modified in the presence of microbial or cellular products during monocyte-to-macrophage differentiation. Indeed, LPS treatment augmented the accumulation of miR-146a and miR-155, whereas IL-4 treatment augmented the accumulation of miR-193b and miR-222 during development. In contrast, some stimuli repressed accumulation of specific miRNAs including interferons (IFNs) (miR-27a, miR-125a-5p, and miR-222), IL-4 (miR-125a-5p), and LPS (miR-27a). RT-PCR-based expression profiling of monocytes differentiated with distinct methods showed that activation-associated miRNAs and markers of macrophage polarization were substantially altered in MDMs differentiated in the presence of non-monocytic peripheral blood mononuclear cells due in part to NF-κB and STAT1 pathway activation. Expression of several of these miRNAs was regulated at a preprocessing step because the expression of the primary miRNAs, but not Dicer, correlated with mature miRNA expression. We conclude that a set of miRNAs is regulated during MDM differentiation, and the rate is uniquely modified for each miRNA by environmental factors. The low basal expression of activation-associated miRNAs in monocytes and their dynamic rates of accumulation during MDM differentiation permit monocytes to tailor miRNA profiles in peripheral tissues during differentiation to macrophages. PMID:25148686

  19. Unprecedented last-glacial mass accumulation rates determined by luminescence dating of loess from western Nebraska

    USGS Publications Warehouse

    Roberts, H.M.; Muhs, D.R.; Wintle, A.G.; Duller, G.A.T.; Bettis, E. Arthur

    2003-01-01

    A high-resolution chronology for Peoria (last glacial period) Loess from three sites in Nebraska, midcontinental North America, is determined by applying optically stimulated luminescence (OSL) dating to 35-50 ??m quartz. At Bignell Hill, Nebraska, an OSL age of 25,000 yr near the contact of Peoria Loess with the underlying Gilman Canyon Formation shows that dust accumulation occurred early during the last glacial maximum (LGM), whereas at Devil's Den and Eustis, Nebraska, basal OSL ages are significantly younger (18,000 and 21,000 yr, respectively). At all three localities, dust accumulation ended at some time after 14,000 yr ago. Mass accumulation rates (MARs) for western Nebraska, calculated using the OSL ages, are extremely high from 18,000 to 14,000 yr-much higher than those calculated for any other pre-Holocene location worldwide. These unprecedented MARs coincide with the timing of a mismatch between paleoenvironmental evidence from central North America, and the paleoclimate simulations from atmospheric global circulation models (AGCMs). We infer that the high atmospheric dust loading implied by these MARs may have played an important role, through radiative forcing, in maintaining a colder-than-present climate over central North America for several thousand years after summer insolation exceeded present-day values. ?? 2003 Elsevier Science (USA). All rights reserved.

  20. Moment accumulation rate on faults in California inferred from viscoelastic earthquake cycle models (Invited)

    NASA Astrophysics Data System (ADS)

    Johnson, K. M.

    2009-12-01

    Calculations of moment accumulation rates on active faults require knowledge of long-term fault slip rates and the area of the fault that is locked interseismically. These parameters are routinely estimated from geodetic data using elastic block models with back slip on dislocations in an elastic half-space. Yet, the elastic models are inconsistent with studies that infer postseismic viscous flow in the lower crust and mantle occurring for decades following large earthquakes. Viscous flow in the lower crust and mantle generates rapid, localized deformation early in the earthquake cycle and slower, more diffuse deformation later in the cycle. Elastic models which neglect this time-dependent flow process may lead to biased estimates of fault slip rates and locking distribution. To address this issue we have developed a three-dimensional earthquake cycle model consisting of fault-bounded blocks in an elastic crust overlying a viscoelastic lower crust and uppermost mantle. It is a kinematic model in which long-term motions of fault-bounded blocks is imposed. Interseismic locking of faults and associated deformation is modeled with steady back-slip on faults and imposed periodic earthquakes. Creep on unlocked portions of the faults occurs at constant stress and therefore the instantaneous creep rate is proportional to the instantaneous stressing rate on the fault. We compare geologic slip rate estimates in southern California with model estimates using GPS data and show that elastic block models underpredict slip rates on several faults that are late in the earthquake cycle and overpredict slip rates on faults that are early in the earthquake cycle. The viscoelastic cycle model, constrained by earthquake timing from the geologic record, predicts fault slip rates that are entirely consistent with geologic estimates for all major faults in southern California. For northern California, fault slip rate estimates using geodetic data appear not to be strongly dependent on

  1. Carbon and Nitrogen Accumulation Rates in Salt Marshes in Oregon, USA

    EPA Science Inventory

    Two important ecosystem services of wetlands are carbon sequestration and filtration of nutrients and particulates. We quantified the carbon and nitrogen accumulation rates in salt marshes at 135 plots distributed across eight estuaries located in Oregon, USA. Net carbon and ...

  2. Isolation of baker's yeast mutants with proline accumulation that showed enhanced tolerance to baking-associated stresses.

    PubMed

    Tsolmonbaatar, Ariunzaya; Hashida, Keisuke; Sugimoto, Yukiko; Watanabe, Daisuke; Furukawa, Shuhei; Takagi, Hiroshi

    2016-12-05

    During bread-making processes, yeast cells are exposed to baking-associated stresses such as freeze-thaw, air-drying, and high-sucrose concentrations. Previously, we reported that self-cloning diploid baker's yeast strains that accumulate proline retained higher-level fermentation abilities in both frozen and sweet doughs than the wild-type strain. Although self-cloning yeasts do not have to be treated as genetically modified yeasts, the conventional methods for breeding baker's yeasts are more acceptable to consumers than the use of self-cloning yeasts. In this study, we isolated mutants resistant to the proline analogue azetidine-2-carboxylate (AZC) derived from diploid baker's yeast of Saccharomyces cerevisiae. Some of the mutants accumulated a greater amount of intracellular proline, and among them, 5 mutants showed higher cell viability than that observed in the parent wild-type strain under freezing or high-sucrose stress conditions. Two of them carried novel mutations in the PRO1 gene encoding the Pro247Ser or Glu415Lys variant of γ-glutamyl kinase (GK), which is a key enzyme in proline biosynthesis in S. cerevisiae. Interestingly, we found that these mutations resulted in AZC resistance of yeast cells and desensitization to proline feedback inhibition of GK, leading to intracellular proline accumulation. Moreover, baker's yeast cells expressing the PRO1(P247S) and PRO1(E415K) gene were more tolerant to freezing stress than cells expressing the wild-type PRO1 gene. The approach described here could be a practical method for the breeding of proline-accumulating baker's yeasts with higher tolerance to baking-associated stresses.

  3. Triclosan exhibits a tendency to accumulate in the epididymis and shows sperm toxicity in male Sprague-Dawley rats.

    PubMed

    Lan, Zhou; Hyung Kim, Tae; Shun Bi, Kai; Hui Chen, Xiao; Sik Kim, Hyung

    2015-01-01

    Triclosan (TCS) is considered a potent endocrine disruptor that causes reproductive toxicity in non-mammals, but it is still unclear exactly whether TCS has adverse effects on the sperm or reproductive organs in mammals. In this study, we aimed to evaluate the distribution status of TCS in male reproductive organs of rats, and seek the correlation with the TCS-induced sperm toxicity or reproductive organ damage. Male rats were intragastrically administered with TCS at a dose of 50 mg/kg, the kinetics of TCS in the plasma and reproductive organs were investigated. TCS in testes and prostates both showed a lower-level distribution compared to that in the plasma, which indicates it has no tendency to accumulate in those organs. However, TCS in the epididymides showed a longer elimination half-life (t1/2 z), a longer the mean retention time (MRT), and a lower clearance (CLZ /F) compared with those in the plasma. Besides, the ratios of mean area under the concentration-time curve (AUC)(0-96 h(epididymides/plasma)) and AUC(0-∞(epididymides/plasma)) were 1.13 and 1.51, respectively. These kinetic parameters suggest TCS has an accumulation tendency in the epididymides. Based on this, we investigated the TCS-induced sperm toxicity and histopathological changes of reproductive organs in rats. TCS was given intragastrically at doses of 10, 50, and 200 mg/kg for 8 weeks. Rats treated with the high dose (200 mg/kg) of TCS showed a significant decrease in daily sperm production (DSP), changes in sperm morphology and epididymal histopathology. Considering the histopathological change in the epididymides, TCS may induce the epididymal damage due to the epididymal accumulation of that.

  4. Distributions and accumulation rates of polycyclic aromatic hydrocarbons in the northern Gulf of Mexico sediments.

    PubMed

    Adhikari, Puspa L; Maiti, Kanchan; Overton, Edward B; Rosenheim, Brad E; Marx, Brian D

    2016-05-01

    Sediment samples collected from shelf, slope and interior basin of the northern Gulf of Mexico during 2011-2013, 1-3 years after the Deepwater Horizon (DWH) oil spill, were utilized to characterize PAH pollution history, in this region. Results indicate that the concentrations of surface ΣPAH43 and their accumulation rates vary between 44 and 160 ng g(-1) and 6-55 ng cm(-2) y(-1), respectively. ΣPAH43 concentration profiles, accumulation rates and Δ(14)C values are significantly altered only for the sediments in the immediate vicinity of the DWH wellhead. This shows that the impact of DWH oil input on deep-sea sediments was generally limited to the area close to the spill site. Further, the PAHs source diagnostic analyses suggest a noticeable change in PAHs composition from higher to lower molecular weight dominance which reflects a change in source of PAHs in the past three years, back to the background composition. Results indicate low to moderate levels of PAH pollution in this region at present, which are unlikely to cause adverse effects on benthic communities.

  5. Ettlia sp. YC001 showing high growth rate and lipid content under high CO2.

    PubMed

    Yoo, Chan; Choi, Gang-Guk; Kim, Sun-Chang; Oh, Hee-Mock

    2013-01-01

    Over 100 green-colored colonies were isolated from environmental samples when cultivating on a BG11 agar medium, and 4 strains showing different morphologies were selected based on light microscopic observation. Among these strains, the microalgal species with the highest growth rate under 10% CO(2) was identified as Ettlia sp. YC001 using an 18S rDNA-based phylogenetic analysis and morphological comparison. The highest cell density of 3.10 g/L (based on dry cell weight) and biomass productivity of 0.19 g/L/d were obtained under 5% CO(2) after 16 days. The lipid content and productivity were also up to 42% of the dry cell weight and 80.0mg/L/d, respectively. The color of the Ettlia sp. YC001 culture changed from green to red after a month due to the accumulation of certain carotenoids. Therefore, it would seem that Ettlia sp. YC001 is appropriate for mitigating CO(2) due to its high biomass productivity, and a suitable candidate for producing biodiesel and high-value products.

  6. Using transplants to measure accumulation rates of epiphytic bryophytes in forests of western Oregon

    USGS Publications Warehouse

    Rosso, A.L.; Muir, Patricia S.; Rambo, T.

    2001-01-01

    We sought a simple and effective transplant method that could be used to measure biomass accumulation rates of epiphytic bryophytes. Trials were carried out in the Pseudotsuga menziesii-dominated forests of western Oregon. We tested multiple transplant methods over a 13-month period while comparing accumulation rates of Antitrichia curtipendula (Hedw.) Brid. and Isothecium myosuroides Brid. among an old-growth stand, a young stand, and a recent clearcut. In our study area, Antitrichia is considered to be an old-growth associate while Isothecium is a more ubiquitous species. Methods tested included containment in net bags, containment in hairnets, and directly tying mats to substrates. Three sizes of transplants were tested with both natural and inert artificial substrates. Transplants of approximately five g enclosed in plastic net bags and tied to either natural or artificial substrates worked well for our purposes. Only minor differences were found in mean accumulation rates between the old growth and young stand, though variation in accumulation rates was higher in the old growth. Neither species appeared capable of surviving in the clearcut. Antitrichia accumulated biomass 60% faster in the canopy than in the understory on average. Antitrichia also accumulated at a faster rate than Isothecium, with mean 13-month biomass increases of 11.8 and 3.7% respectively for 5 g transplants in the understory. Our results suggest that Antitrichia's association with old growth may be due more to dispersal or establishment limitations than to a decreased ability to grow in young stands.

  7. Clusterin: full-length protein and one of its chains show opposing effects on cellular lipid accumulation

    PubMed Central

    Matukumalli, Suvarsha Rao; Tangirala, Ramakrishna; Rao, C. M.

    2017-01-01

    Proteins, made up of either single or multiple chains, are designed to carry out specific biological functions. We found an interesting example of a two-chain protein where administration of one of its chains leads to a diametrically opposite outcome than that reported for the full-length protein. Clusterin is a highly glycosylated protein consisting of two chains, α- and β-clusterin. We have investigated the conformational features, cellular localization, lipid accumulation, in vivo effects and histological changes upon administration of recombinant individual chains of clusterin. We demonstrate that recombinant α- and β-chains exhibit structural and functional differences and differ in their sub-cellular localization. Full-length clusterin is known to lower lipid levels. In contrast, we find that β-chain-treated cells accumulate 2-fold more lipid than controls. Interestingly, α-chain-treated cells do not show such increase. Rabbits injected with β-chain, but not α-chain, show ~40% increase in weight, with adipocyte hypertrophy, liver and kidney steatosis. Many, sometimes contrasting, roles are ascribed to clusterin in obesity, metabolic syndrome and related conditions. Our findings of differential localization and activities of individual chains of clusterin should help in understanding better the roles of clusterin in metabolism. PMID:28120874

  8. Complex Wind-Induced Variations of Surface Snow Accumulation Rates over East Antarctica

    NASA Astrophysics Data System (ADS)

    Das, I.; Scambos, T. A.; Koenig, L.; van den Broeke, M.; Lenaerts, J.

    2015-12-01

    Accurate quantification of surface snow-accumulation over Antarctica is important for mass balance estimates and climate studies based on ice core records. Using airborne radar, lidar and thresholds of surface slope, modeled surface mass balance (SMB) and wind fields, we have predicted continent-wide distribution of wind-scour zones over Antarctica. These zones are located over relatively steep ice surfaces formed by ice flow over bedrock topography. Near-surface winds accelerate over these steeper slopes and erode and sublimate the snow. This results in numerous localized regions (typically ≤ 200 km2) with reduced or negative surface accumulation. Although small zones of re-deposition occur at the base of the steeper slope areas, the redeposited mass is small relative to the ablation loss. Total losses from wind-scour and wind-glaze areas amounts to tens of gigatons annually. Near the coast, winds often blow significant amounts of surface snow from these zones into the ocean. Large uncertainties remain in SMB estimates over East Antarctica as climate models do not adequately represent the small-scale physical processes that lead to mass loss or redistribution over the wind-scour zones. In this study, we also use Operation IceBridge's snow radar data to provide evidence for a gradual ablation of ~16-18 m of firn (~200 years of accumulation) from wind-scour zones over the upper Recovery Ice Stream catchment. The maximum ablation rates observed in this region are ~ -54 kg m-2 a-1 (-54 mm water equivalent a-1). Our airborne radio echo-sounding analysis show snow redeposition downslope of the wind-scour zones is <10% of the cumulative mass loss. Our study shows that the local mass loss is dominated by sublimation to water vapor rather than wind-transport of snow.

  9. Topographic control and accumulation rate of some Holocene coral reefs: south Florida and Dry Tortugas

    USGS Publications Warehouse

    Shinn, E.A.; Hudson, J.H.; Halley, R.B.; Lidz, B.H.; Taylor, D.L.

    1977-01-01

    Core drilling and examination of underwater excavation on 6 reef sites in south Florida and Dry Tortugas revealed that underlying topography is the major factor controlling reef morphology. Carbon-14 dating on coral recovered from cores enables calculation of accumulation rates. Accumulation rates were found to range from 0.38 m/1000 years in thin Holocene reefs to as much as 4.85 m/1000 years in thicker buildups. Cementation and alteration of corals were found to be more pronounced in areas of low buildup rates than in areas of rapid accumulation rates. Acropora palmata, generally considered the major reef builder in Florida, was found to be absent in most reefs drilled. At Dry Tortugas, the more than 13-meter thick Holocene reef did not contain A. palmata. The principal reef builders in this outer reef are the same as those which built the Pleistocene Key Largo formation, long considered to be fossilized patch reef complex.

  10. Accumulation rates and predominant atmospheric sources of natural and anthropogenic Hg and Pb on the Faroe Islands

    NASA Astrophysics Data System (ADS)

    Shotyk, W.; Goodsite, M. E.; Roos-Barraclough, F.; Givelet, N.; Le Roux, G.; Weiss, D.; Cheburkin, A. K.; Knudsen, K.; Heinemeier, J.; van Der Knaap, W. O.; Norton, S. A.; Lohse, C.

    2005-01-01

    A monolith representing 5420 14C yr of peat accumulation was collected from a blanket bog at Myrarnar, Faroe Islands. The maximum Hg concentration (498 ng/g at a depth of 4.5 cm) coincides with the maximum concentration of anthropogenic Pb (111 μg/g). Age dating of recent peat accumulation using 210Pb (CRS model) shows that the maxima in Hg and Pb concentrations occur at AD 1954 ± 2. These results, combined with the isotopic composition of Pb in that sample ( 206Pb/ 207Pb = 1.1720 ± 0.0017), suggest that coal burning was the dominant source of both elements. From the onset of peat accumulation (ca. 4286 BC) until AD 1385, the ratios Hg/Br and Hg/Se were constant (2.2 ± 0.5 × 10 -4 and 8.5 ± 1.8 × 10 -3, respectively). Since then, Hg/Br and Hg/Se values have increased, also reaching their maxima in AD 1954. The age date of the maximum concentrations of anthropogenic Hg and Pb in the Faroe Islands is consistent with a previous study of peat cores from Greenland and Denmark (dated using the atmospheric bomb pulse curve of 14C), which showed maximum concentrations in AD 1953. The average rate of atmospheric Hg accumulation from 1520 BC to AD 1385 was 1.27 ± 0.38 μg/m 2/yr. The Br and Se concentrations and the background Hg/Br and Hg/Se ratios were used to calculate the average rate of natural Hg accumulation for the same period, 1.32 ± 0.36 μg/m 2/yr and 1.34 ± 0.29 μg/m 2/yr, respectively. These fluxes are similar to the preanthropogenic rates obtained using peat cores from Switzerland, southern Greenland, southern Ontario, Canada, and the northeastern United States. Episodic volcanic emissions and the continual supply of marine aerosols to the Faroe Islands, therefore, have not contributed significantly to the Hg inventory or the Hg accumulation rates, relative to these other areas. The maximum rate of Hg accumulation was 34 μg/m 2/yr. The greatest fluxes of anthropogenic Hg accumulation calculated using Br and Se, respectively, were 26 and 31 μg/m 2

  11. Constraints on the Recent Rate of Lunar Regolith Accumulation from Diviner Observations

    NASA Technical Reports Server (NTRS)

    Ghent, R. R.; Hayne, P. O.; Bandfield, J. L.; Campbell, B. A.; Carter, L. M.

    2012-01-01

    Many large craters on the lunar nearside show radar CPR signatures consistent with the presence of blocky ejecta blankets, to distances pre dicted to be covered by continuous ejecta. However, most of these sur faces show limited enhancements in both derived rock abundance and rock-free regolith temperatures calculated from Diviner nighttime infrar ed observations. This indicates that the surface rocks are covered by a layer of thermally insulating regolith material. By matching the results of one-dimensional thermal models to Diviner nighttime temperat ures, we have constrained the thermophysical properties of the upper regolith, and the thickness of regolith overlying proximal ejecta. We find that for all of the regions surveyed (all in the nearside highla nds), the nighttime cooling curves are best fit by a density profile that varies exponentially with depth, consistent with a linear mixture of rocks and regolith fines, with increasing rock content with depth . Our results show significant spatial variations in the density e-folding depth, H, among young crater ejecta regions, indicating differen ces in the thickness of accumulated regolith. However, away from youn g craters, the average regional "equilibrium" value of H (Heq) is remarkably consistent, and is on the order of 5 cm. As expected, near-rim ejecta associated with young craters show lower values of H, indicating a high rock content in the shallow subsurface; for older craters, the average value of H approaches the regional value of Heq. Calculat ed H values for young craters show a clear correlation with published ages, providing the first observational constraint on the recent rate of lunar regolith accumulation. In addition, this result may help to resolve the apparent discrepancy between ages calculated from small crater counts on melt ponds versus counts on continuous ejecta (e.g., King crater; Ashley et al., 2011, LPSC 42, abstract 2437). This method could, in principle, be extended to other

  12. Impact Of Particle Agglomeration On Accumulation Rates In The Glass Discharge Riser Of HLW Melter

    SciTech Connect

    Kruger, A. A.; Rodriguez, C. A.; Matyas, J.; Owen, A. T.; Jansik, D. P.; Lang, J. B.

    2012-11-12

    The major factor limiting waste loading in continuous high-level radioactive waste (HLW) melters is an accumulation of particles in the glass discharge riser during a frequent and periodic idling of more than 20 days. An excessive accumulation can produce robust layers a few centimeters thick, which may clog the riser, preventing molten glass from being poured into canisters. Since the accumulation rate is driven by the size of particles we investigated with x-ray microtomography, scanning electron microscopy, and image analysis the impact of spinel forming components, noble metals, and alumina on the size, concentration, and spatial distribution of particles, and on the accumulation rate. Increased concentrations of Fe and Ni in the baseline glass resulted in the formation of large agglomerates that grew over the time to an average size of ~185+-155 {mu}m, and produced >3 mm thick layer after 120 h at 850 deg C. The noble metals decreased the particle size, and therefore significantly slowed down the accumulation rate. Addition of alumina resulted in the formation of a network of spinel dendrites which prevented accumulation of particles into compact layers.

  13. Accumulate repeat accumulate codes

    NASA Technical Reports Server (NTRS)

    Abbasfar, Aliazam; Divsalar, Dariush; Yao, Kung

    2004-01-01

    In this paper we propose an innovative channel coding scheme called 'Accumulate Repeat Accumulate codes' (ARA). This class of codes can be viewed as serial turbo-like codes, or as a subclass of Low Density Parity Check (LDPC) codes, thus belief propagation can be used for iterative decoding of ARA codes on a graph. The structure of encoder for this class can be viewed as precoded Repeat Accumulate (RA) code or as precoded Irregular Repeat Accumulate (IRA) code, where simply an accumulator is chosen as a precoder. Thus ARA codes have simple, and very fast encoder structure when they representing LDPC codes. Based on density evolution for LDPC codes through some examples for ARA codes, we show that for maximum variable node degree 5 a minimum bit SNR as low as 0.08 dB from channel capacity for rate 1/2 can be achieved as the block size goes to infinity. Thus based on fixed low maximum variable node degree, its threshold outperforms not only the RA and IRA codes but also the best known LDPC codes with the dame maximum node degree. Furthermore by puncturing the accumulators any desired high rate codes close to code rate 1 can be obtained with thresholds that stay close to the channel capacity thresholds uniformly. Iterative decoding simulation results are provided. The ARA codes also have projected graph or protograph representation that allows for high speed decoder implementation.

  14. Faster evolving Drosophila paralogs lose expression rate and ubiquity and accumulate more non-synonymous SNPs

    PubMed Central

    2014-01-01

    Background Duplicated genes can indefinately persist in genomes if either both copies retain the original function due to dosage benefit (gene conservation), or one of the copies assumes a novel function (neofunctionalization), or both copies become required to perform the function previously accomplished by a single copy (subfunctionalization), or through a combination of these mechanisms. Different models of duplication retention imply different predictions about substitution rates in the coding portion of paralogs and about asymmetry of these rates. Results We analyse sequence evolution asymmetry in paralogs present in 12 Drosophila genomes using the nearest non-duplicated orthologous outgroup as a reference. Those paralogs present in D. melanogaster are analysed in conjunction with the asymmetry of expression rate and ubiquity and of segregating non-synonymous polymorphisms in the same paralogs. Paralogs accumulate substitutions, on average, faster than their nearest singleton orthologs. The distribution of paralogs’ substitution rate asymmetry is overdispersed relative to that of orthologous clades, containing disproportionally more unusually symmetric and unusually asymmetric clades. We show that paralogs are more asymmetric in: a) clades orthologous to highly constrained singleton genes; b) genes with high expression level; c) genes with ubiquitous expression and d) non-tandem duplications. We further demonstrate that, in each asymmetrically evolving pair of paralogs, the faster evolving member of the pair tends to have lower average expression rate, lower expression uniformity and higher frequency of non-synonymous SNPs than its slower evolving counterpart. Conclusions Our findings are consistent with the hypothesis that many duplications in Drosophila are retained despite stabilising selection being more relaxed in one of the paralogs than in the other, suggesting a widespread unfinished pseudogenization. This phenomenon is likely to make detection of

  15. Radon exhalation rates from building materials using electret ion chamber radon monitors in accumulators.

    PubMed

    Kotrappa, Payasada; Stieff, Frederick

    2009-08-01

    An electret ion chamber (EIC) radon monitor in a sealed accumulator measures the integrated average radon concentration at the end of the accumulation duration. Theoretical equations have been derived to relate such radon concentrations (Bq m(-3) ) to the radon emanation rate (Bq d(-1)) from building materials enclosed in the accumulator. As an illustration, a 4-L sealable glass jar has been used as an accumulator to calculate the radon emanation rate from different granite samples. The radon emanation rate was converted into radon flux (Bq mm(-2) d(-1)) by dividing the emanation rate by surface area of the sample. Fluxes measured on typical, commercially available granites ranged from 20-30 Bq m(-2) d(-1). These results are similar to the results reported in the literature. The lower limit of detection for a 2-d measurement works out to be 7 Bq m(-2) d(-1). Equations derived can also be used for other sealable accumulators and other integrating detectors, such as alpha track detectors.

  16. Verification of International Space Station Component Leak Rates by Helium Accumulation Method

    NASA Technical Reports Server (NTRS)

    Underwood, Steve D.; Smith, Sherry L.

    2003-01-01

    Discovery of leakage on several International Space Station U.S. Laboratory Module ammonia system quick disconnects (QDs) led to the need for a process to quantify total leakage without removing the QDs from the system. An innovative solution was proposed allowing quantitative leak rate measurement at ambient external pressure without QD removal. The method utilizes a helium mass spectrometer configured in the detector probe mode to determine helium leak rates inside a containment hood installed on the test component. The method was validated through extensive developmental testing. Test results showed the method was viable, accurate and repeatable for a wide range of leak rates. The accumulation method has been accepted by NASA and is currently being used by Boeing Huntsville, Boeing Kennedy Space Center and Boeing Johnson Space Center to test welds and valves and will be used by Alenia to test the Cupola. The method has been used in place of more expensive vacuum chamber testing which requires removing the test component from the system.

  17. Rates and environmental controls of aeolian dust accumulation, Athabasca River Valley, Canadian Rocky Mountains

    NASA Astrophysics Data System (ADS)

    Hugenholtz, Chris H.; Wolfe, Stephen A.

    2010-09-01

    Despite an abundance of sedimentary archives of mineral dust (i.e. loess) accumulations from cold, humid environments, the absence of contemporary process investigations limits paleoenvironmental interpretations in these settings. Dust accumulations measured at Jasper Lake, a seasonally-filled reach of the glacially-fed Athabasca River in the Canadian Rocky Mountains, are some of the highest contemporary rates recorded to date. High deposition rates, including a maximum of 27,632 kg ha -1 month -1, occur during river low-flow periods, but even the lowest deposition rates, occurring during bankfull periods, exceed other contemporary rates of deposition. High rates of dust deposition may be attributed to geomorphic and climatic controls affecting sediment supply, availability and transport, and biologic factors affecting accumulation. Localized confinement of the Jasper River by tributary river alluvial fans has caused channel expansion upstream, and formation of the shallow depositional basin known as Jasper Lake. This localized sedimentary basin, coupled with large seasonal water level fluctuations and suitably high wind speeds, favors seasonal dust production. In addition, a dense source-proximal coniferous forest stand encourages high dust accumulation, via increased aerodynamic roughness and airflow deceleration. The forest stand also appears to act as an efficient dust filter, with the interception and storage of dust by the forest canopy playing a significant role with regards to secondary fallout and sediment accumulation. Overall, these results provide new insights on the environmental controls of dust entrainment and accumulation in cold, humid settings, and help clarify controls on the formation of Holocene river-sourced loess deposits.

  18. Incorporation of radiometric tracers in peat and implications for estimating accumulation rates.

    PubMed

    Hansson, Sophia V; Kaste, James M; Olid, Carolina; Bindler, Richard

    2014-09-15

    Accurate dating of peat accumulation is essential for quantitatively reconstructing past changes in atmospheric metal deposition and carbon burial. By analyzing fallout radionuclides (210)Pb, (137)Cs, (241)Am, and (7)Be, and total Pb and Hg in 5 cores from two Swedish peatlands we addressed the consequence of estimating accumulation rates due to downwashing of atmospherically supplied elements within peat. The detection of (7)Be down to 18-20 cm for some cores, and the broad vertical distribution of (241)Am without a well-defined peak, suggest some downward transport by percolating rainwater and smearing of atmospherically deposited elements in the uppermost peat layers. Application of the CRS age-depth model leads to unrealistic peat mass accumulation rates (400-600 g m(-2) yr(-1)), and inaccurate estimates of past Pb and Hg deposition rates and trends, based on comparisons to deposition monitoring data (forest moss biomonitoring and wet deposition). After applying a newly proposed IP-CRS model that assumes a potential downward transport of (210)Pb through the uppermost peat layers, recent peat accumulation rates (200-300 g m(-2) yr(-1)) comparable to published values were obtained. Furthermore, the rates and temporal trends in Pb and Hg accumulation correspond more closely to monitoring data, although some off-set is still evident. We suggest that downwashing can be successfully traced using (7)Be, and if this information is incorporated into age-depth models, better calibration of peat records with monitoring data and better quantitative estimates of peat accumulation and past deposition are possible, although more work is needed to characterize how downwashing may vary between seasons or years.

  19. Nutritive Value and Herbage Accumulation Rates of Pasture Sown to Grass, Legume, and Chicory

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Planting pastures to mixtures of forages may benefit herbage production; however, wide fluctuations in botanical composition could cause unstable nutritive value. A grazing study was conducted to examine how forage mixture complexity influenced nutritive value and accumulation rate during spring, su...

  20. Distinct mutation accumulation rates among tissues determine the variation in cancer risk

    PubMed Central

    Hao, Dapeng; Wang, Li; Di, Li-jun

    2016-01-01

    Cancer is believed to be a result of accumulated mutations. However, this concept has not been fully confirmed owing to the impossibility of tracking down the ancestral somatic cell. We sought to verify the concept by exploring the correlation between cancer risk and mutation accumulation among different tissues. We hypothesized that the detected mutations through bulk tumor sequencing are commonly shared in majority, if not all, of tumor cells and are therefore largely a reflection of the mutations accumulated in the ancestral cell that gives rise to tumor. We collected a comprehensive list of mutation frequencies revealed by bulk tumor sequencing, and investigated its correlation with cancer risk to mirror the correlation between mutation accumulation and cancer risk. This revealed an approximate 1:1 relationship between mutation frequency and cancer risk in 41 different cancer types based on the sequencing data of 5,542 patients. The correlation strongly suggests that variation in cancer risk among tissues is mainly attributable to distinct mutation accumulation rates. Moreover, the correlation establishes a baseline to evaluate the effect of non-mutagenic carcinogens on cancer risk. Finally, our mathematic modeling provides a reasonable explanation to reinforce that cancer risk is predominantly determined by the first rate-limiting mutation. PMID:26785814

  1. Equatorial Pacific Reactive Phosphorus Accumulation Rates across the Eocene/Oligocene Transition

    NASA Astrophysics Data System (ADS)

    Faul, K. L.; Stewart, K. L.

    2007-12-01

    Paired benthic foraminiferal stable isotope and trace metal records from ODP Site 1218 in the equatorial Pacific have shown that the Eocence/Oligocene (E/O) transition (~34 Ma) represents a major increase in Antarctic ice accumulation and a rapid deepening of the global calcite compensation depth (CCD) occurring in two steps [e.g., Lear et al., 2000; Lear et al., 2004; Coxall et al., 2005; Palike et al., 2006]. Simultaneous increases in biogenic mass accumulation rates (MARs) around Australia and in the Atlantic Ocean have been interpreted as representing increased productivity and/or organic carbon (C) burial possibly linked to cooling and ice sheet growth [Diester-Hass and Zahn, 2001; Anderson and Delaney, 2005]. Because the global CCD deepens across the transition, there is a need to distinguish organic C burial changes from CCD changes. We are determining reactive phosphorus (P, micromol P cm-2 kyr-1) MARs as an indicator of organic C burial for Site 1218 to help constrain the relative role of productivity during the E/O climatic transition. Reactive phosphorus (the sum of oxide associated, authigenic, and organic P; sequentially extracted from bulk sediment), delivered to the sediment water interface with organic C, is well preserved in oxygenated sediments. Preliminary results show an order of magnitude decrease in reactive P concentrations (from ~100 to ~10 micromol P g-1) across the E/O boundary. This may indicate that absolute organic C burial as well as the ratio of organic C burial to calcite burial may have decreased across the E/O transition in the equatorial Pacific upwelling zone.

  2. Accumulate-Repeat-Accumulate-Accumulate-Codes

    NASA Technical Reports Server (NTRS)

    Divsalar, Dariush; Dolinar, Sam; Thorpe, Jeremy

    2004-01-01

    Inspired by recently proposed Accumulate-Repeat-Accumulate (ARA) codes [15], in this paper we propose a channel coding scheme called Accumulate-Repeat-Accumulate-Accumulate (ARAA) codes. These codes can be seen as serial turbo-like codes or as a subclass of Low Density Parity Check (LDPC) codes, and they have a projected graph or protograph representation; this allows for a high-speed iterative decoder implementation using belief propagation. An ARAA code can be viewed as a precoded Repeat-and-Accumulate (RA) code with puncturing in concatenation with another accumulator, where simply an accumulator is chosen as the precoder; thus ARAA codes have a very fast encoder structure. Using density evolution on their associated protographs, we find examples of rate-lJ2 ARAA codes with maximum variable node degree 4 for which a minimum bit-SNR as low as 0.21 dB from the channel capacity limit can be achieved as the block size goes to infinity. Such a low threshold cannot be achieved by RA or Irregular RA (IRA) or unstructured irregular LDPC codes with the same constraint on the maximum variable node degree. Furthermore by puncturing the accumulators we can construct families of higher rate ARAA codes with thresholds that stay close to their respective channel capacity thresholds uniformly. Iterative decoding simulation results show comparable performance with the best-known LDPC codes but with very low error floor even at moderate block sizes.

  3. T1 Relaxation Rate (R1) Indicates Nonlinear Mn Accumulation in Brain Tissue of Welders With Low-Level Exposure

    PubMed Central

    Lee, Eun-Young; Flynn, Michael R.; Du, Guangwei; Lewis, Mechelle M.; Fry, Rebecca; Herring, Amy H.; Van Buren, Eric; Van Buren, Scott; Smeester, Lisa; Kong, Lan; Yang, Qing; Mailman, Richard B.; Huang, Xuemei

    2015-01-01

    Although the essential element manganese (Mn) is neurotoxic at high doses, the effects of lower exposure are unclear. MRI T1-weighted (TIW) imaging has been used to estimate brain Mn exposure via the pallidal index (PI), defined as the T1W intensity ratio in the globus pallidus (GP) versus frontal white matter (FWM). PI may not, however, be sensitive to Mn in GP because Mn also may accumulate in FWM. This study explored: (1) whether T1 relaxation rate (R1) could quantify brain Mn accumulation more sensitively; and (2) the dose-response relationship between estimated Mn exposure and T1 relaxation rate (R1). Thirty-five active welders and 30 controls were studied. Occupational questionnaires were used to estimate hours welding in the past 90 days (HrsW) and lifetime measures of Mn exposure. T1W imaging and T1-measurement were utilized to generate PI and R1 values in brain regions of interest (ROIs). PI did not show a significant association with any measure of Mn and/or welding-related exposure. Conversely, in several ROIs, R1 showed a nonlinear relationship to HrsW, with R1 signal increasing only after a critical exposure was reached. The GP had the greatest rate of Mn accumulation. Welders with higher exposure showed significantly higher R1 compared either with controls or with welders with lower exposure. Our data are additional evidence that Mn accumulation can be assessed more sensitively by R1 than by PI. Moreover, the nonlinear relationship between welding exposure and Mn brain accumulation should be considered in future studies and policies. PMID:25953701

  4. Highly anomalous accumulation rates of C and N recorded by a relic, free-floating peatland in Central Italy.

    PubMed

    Zaccone, Claudio; Lobianco, Daniela; Shotyk, William; Ciavatta, Claudio; Appleby, Peter G; Brugiapaglia, Elisabetta; Casella, Laura; Miano, Teodoro M; D'Orazio, Valeria

    2017-02-23

    Floating islands mysteriously moving around on lakes were described by several Latin authors almost two millennia ago. These fascinating ecosystems, known as free-floating mires, have been extensively investigated from ecological, hydrological and management points of view, but there have been no detailed studies of their rates of accumulation of organic matter (OM), organic carbon (OC) and total nitrogen (TN). We have collected a peat core 4 m long from the free-floating island of Posta Fibreno, a relic mire in Central Italy. This is the thickest accumulation of peat ever found in a free-floating mire, yet it has formed during the past seven centuries and represents the greatest accumulation rates, at both decadal and centennial timescale, of OM (0.63 vs. 0.37 kg/m(2)/yr), OC (0.28 vs. 0.18 kg/m(2)/yr) and TN (3.7 vs. 6.1 g/m(2)/yr) ever reported for coeval peatlands. The anomalously high accretion rates, obtained using (14)C age dating, were confirmed using (210)Pb and (137)Cs: these show that the top 2 m of Sphagnum-peat has accumulated in only ~100 years. As an environmental archive, Posta Fibreno offers a temporal resolution which is 10x greater than any terrestrial peat bog, and promises to provide new insight into environmental changes occurring during the Anthropocene.

  5. Highly anomalous accumulation rates of C and N recorded by a relic, free-floating peatland in Central Italy

    PubMed Central

    Zaccone, Claudio; Lobianco, Daniela; Shotyk, William; Ciavatta, Claudio; Appleby, Peter G.; Brugiapaglia, Elisabetta; Casella, Laura; Miano, Teodoro M.; D’Orazio, Valeria

    2017-01-01

    Floating islands mysteriously moving around on lakes were described by several Latin authors almost two millennia ago. These fascinating ecosystems, known as free-floating mires, have been extensively investigated from ecological, hydrological and management points of view, but there have been no detailed studies of their rates of accumulation of organic matter (OM), organic carbon (OC) and total nitrogen (TN). We have collected a peat core 4 m long from the free-floating island of Posta Fibreno, a relic mire in Central Italy. This is the thickest accumulation of peat ever found in a free-floating mire, yet it has formed during the past seven centuries and represents the greatest accumulation rates, at both decadal and centennial timescale, of OM (0.63 vs. 0.37 kg/m2/yr), OC (0.28 vs. 0.18 kg/m2/yr) and TN (3.7 vs. 6.1 g/m2/yr) ever reported for coeval peatlands. The anomalously high accretion rates, obtained using 14C age dating, were confirmed using 210Pb and 137Cs: these show that the top 2 m of Sphagnum-peat has accumulated in only ~100 years. As an environmental archive, Posta Fibreno offers a temporal resolution which is 10x greater than any terrestrial peat bog, and promises to provide new insight into environmental changes occurring during the Anthropocene. PMID:28230066

  6. Constraints on the recent rate of lunar regolith accumulation from Diviner observations

    NASA Astrophysics Data System (ADS)

    Ghent, R. R.; Hayne, P. O.; Bandfield, J. L.; Campbell, B. A.; Carter, L. M.; Allen, C.; Paige, D. A.

    2012-12-01

    Many large craters on the lunar nearside show radar CPR signatures consistent with the presence of blocky ejecta blankets, to distances predicted to be covered by continuous ejecta. However, most of these surfaces show limited enhancements in both derived rock abundance and rock-free regolith temperatures calculated from Diviner nighttime infrared observations. This indicates that the surface rocks are covered by a layer of thermally insulating regolith material. By matching the results of one-dimensional thermal models to Diviner nighttime temperatures, we have constrained the thermophysical properties of the upper regolith, and the thickness of regolith overlying proximal ejecta. We find that for all of the regions surveyed (all in the nearside highlands), the nighttime cooling curves are best fit by a density profile that varies exponentially with depth, consistent with a linear mixture of rocks and regolith fines, with increasing rock content with depth. Our results show significant spatial variations in the density e-folding depth, H, among young crater ejecta regions, indicating differences in the thickness of accumulated regolith. However, away from young craters, the average regional "equilibrium" value of H (Heq) is remarkably consistent, and is on the order of 5 cm. As expected, near-rim ejecta associated with young craters show lower values of H, indicating a high rock content in the shallow subsurface; for older craters, the average value of H approaches the regional value of Heq. Calculated H values for young craters (Giordano Bruno, Moore F, Byrgius A, Necho, Tycho, Jackson, King, and Copernicus) show a clear correlation with published ages, providing the first observational constraint on the recent rate of lunar regolith accumulation. In addition, this result may help to resolve the apparent discrepancy between ages calculated from small crater counts on melt ponds versus counts on continuous ejecta (e.g., King crater; Ashley et al., 2011, LPSC 42

  7. Hydroacoustic and spatial analysis of sediment fluxes and accumulation rates in two Virginia reservoirs, USA.

    PubMed

    Clark, E V; Odhiambo, B K; Yoon, S; Pilati, L

    2015-06-01

    Watershed sediment fluxes and reservoir sediment accumulation rates were analyzed in two contrasting reservoir systems in central and western Virginia. Lake Pelham, located in the Piedmont geologic province, is a human-impacted reservoir with a watershed dominated by agricultural, residential and industrial land uses. Conversely, Lake Moomaw has a largely undeveloped watershed characterized by very steep slopes and forested land use located in the Valley and Ridge province. The Revised Universal Soil Loss Equation (RUSLE) and sediment delivery ratios (SDRs) were used to estimate soil losses in the two watersheds. Bathymetric and sediment accumulation surveys of the two reservoirs were also conducted using a multi-frequency hydroacoustic surveying system. The RUSLE/SDR erosion model estimates 2150 kg ha(-1) year(-1) for Lake Pelham and 2720 kg ha(-1) year(-1) for Lake Moomaw, a 410 and 13 % increase from assumed pristine (100 % forested) land use for the respective basins. Mean sediment accumulation rates of 1.51 and 0.60 cm year(-1) were estimated from the hydroacoustic survey of Lake Pelham and Lake Moomaw, respectively. Overall, Lake Moomaw has relatively low sediment accumulation rates; however, the reservoir is vulnerable to increases in sediment fluxes with further human development due to the steep slopes and highly erodible colluvial soils that characterize the basin. Higher erosion and sediment accumulation rates in Lake Pelham are most likely reflecting the impact of human development on sedimentation processes, where the loss of vegetal buffers and increase in impervious surfaces exacerbates both the surficial soil losses as well as intrinsic stream sediment production leading to the current annual reservoir capacity loss of 0.4 %.

  8. Greenland snow accumulation rates estimated by the retracking of percolation facies from airborne radar

    NASA Astrophysics Data System (ADS)

    de la Pena, S.; Howat, I. M.

    2012-12-01

    The margins of the Greenland Ice Sheet are experiencing substantial thinning due to warming in the arctic regions, and there is a growing concern about the effects that mass imbalance of the ice sheet could have on climate and sea level rise. Although volume changes of the ice sheet may be inferred by remote sensing methods, mass gain and accumulation fluctuations are not easily distinguished and are poorly resolved. Recent advances in airborne radar techniques have resulted in systems capable of resolving snow accumulation by retracking internal layers formed by refreezing of surface meltwater that percolates through the snowpack, a phenomenon increasingly common in Greenland. We present accumulation rates for the catchment areas of the Jakobshavn, Helheim, and Rusell glaciers derived from snow depth resolved by snow and Ku-band airborne radar, flown as part of NASA's Operation IceBridge.

  9. Character, paleoenvironment, rate of accumulation, and evidence for seismic triggering of Holocene turbidites, Canada Abyssal Plain, Arctic Ocean

    USGS Publications Warehouse

    Grantz, A.; Phillips, R.L.; Mullen, M.W.; Starratt, S.W.; Jones, Glenn A.; Naidu, A.S.; Finney, B.P.

    1996-01-01

    Four box cores and one piston core show that Holocene sedimentation on the southern Canada Abyssal Plain for the last 8010??120 yr has consisted of a continuing rain of pelagic organic and ice-rafted elastic sediment with a net accumulation rate during the late Holocene of ???10 mm/1000 yr, and episodically emplaced turbidites 1-5 m thick deposited at intervals of 830 to 3450 yr (average 2000 yr). The average net accumulation rate of the mixed sequence of turbidites and thin pelagite interbeds in the cores is about 1.2 m/1000 yr. Physiography suggests that the turbidites originated on the Mackenzie Delta or its clinoform, and ??13C values of -27 to - 25??? in the turbidites are compatible with a provenance on a delta. Extant displaced neritic and lower slope to basin plain calcareous benthic foraminifers coexist in the turbidite units. Their joint occurence indicates that the turbidites originated on the modern continental shelf and entrained sediment from the slope and rise enroute to their final resting place on the Canada Abyssal Plain. The presence of Middle Pleistocene diatoms in the turbidites suggests, in addition, that the turbidites may have originated in shallow submarine slides beneath the upper slope or outer shelf. Small but consistent differences in organic carbon content and ??13C values between the turbidite units suggest that they did not share an identical provenance, which is at least compatible with an origin in slope failures. The primary provenance of the ice-rafted component of the pelagic beds was the glaciated terrane of northwestern Canada; and the provenance of the turbidite units was Pleistocene and Holocene sedimentary deposits on the outer continental shelf and upper slope of the Mackenzie Delta. Largely local derivation of the sediment of the Canada Abyssal Plain indicates that sediment accumulation rates in the Arctic Ocean are valid only for regions with similar depositional sources and processes, and that these rates cannot be

  10. Soil carbon stocks and their rates of accumulation and loss in a boreal forest landscape

    USGS Publications Warehouse

    Rapalee, G.; Trumbore, S.E.; Davidson, E.A.; Harden, J.W.; Veldhuis, H.

    1998-01-01

    Boreal forests and wetlands are thought to be significant carbon sinks, and they could become net C sources as the Earth warms. Most of the C of boreal forest ecosystems is stored in the moss layer and in the soil. The objective of this study was to estimate soil C stocks (including moss layers) and rates of accumulation and loss for a 733 km2 area of the BOReal Ecosystem-Atmosphere Study site in northern Manitoba, using data from smaller-scale intensive field studies. A simple process-based model developed from measurements of soil C inventories and radiocarbon was used to relate soil C storage and dynamics to soil drainage and forest stand age. Soil C stocks covary with soil drainage class, with the largest C stocks occurring in poorly drained sites. Estimated rates of soil C accumulation or loss are sensitive to the estimated decomposition constants for the large pool of deep soil C, and improved understanding of deep soil C decomposition is needed. While the upper moss layers regrow and accumulate C after fires, the deep C dynamics vary across the landscape, from a small net sink to a significant source. Estimated net soil C accumulation, averaged for the entire 733 km2 area, was 20 g C m-2 yr-1 (28 g C m-2 yr-1 accumulation in surface mosses offset by 8 g C m-2 yr-1 lost from deep C pools) in a year with no fire. Most of the C accumulated in poorly and very poorly drained soils (peatlands and wetlands). Burning of the moss layer in only 1% of uplands would offset the C stored in the remaining 99% of the area. Significant interannual variability in C storage is expected because of the irregular occurrence of fire in space and time. The effects of climate change and management on fire frequency and on decomposition of immense deep soil C stocks are key to understanding future C budgets in boreal forests.

  11. [ABA accumulation and distribution during the leaf tissues shows its role stomatal conductance regulation under short-term salinity].

    PubMed

    Akhiiarova, G R; Fricke, W; Veselov, D S; Kudoiarova, G R; Veselov, S Iu

    2006-01-01

    The regulative role of ABA in the rapid plant stomatal reactions in response to salinity was investigated. The influence of the short-term salinity on the overall ABA accumulation and its distribution within the mature leaf (revealed by immunohystochemical technique) and stomatal conductance of barley (Hordeum vulgare L.) were determined. Rapid bulk leaf ABA accumulation and increase in ABA immunolabeling in the mesophyl and guard cells of stomata were shown. The bulk ABA increasing in mature barley leaves coincided with stomatal closure induced by salt treatment indicating on the ABA contribution to the rapid stomatal closure.

  12. Rate of production, dissolution and accumulation of biogenic solids in the ocean

    NASA Technical Reports Server (NTRS)

    Arrhenius, G.

    1988-01-01

    The equatorial current system, by its response to global circulation changes, provides a unique recording mechanism for long range climatic oscillations. A permanent record of the changes in rate of upwelling and organic production is generated in the equatorial deep sea sediments, particularly by such biogenic components which are unaffected by secondary dissolution. In order to determine the rates of accumulation of various sedimentary components, a reliable differential measurement of age of the strata must be obtained. Various approaches to this problem are reviewed, and sources of error discussed. Secondary dissolution of calcium carbonate introduces a substantial and variable difference between the dissolution-modified, and hence a priori unknown, rate of deposition on one hand and the rate of accumulation, derivable from the observed concentration, on the other. The cause and magnitude of these variations are of importance, particularly since some current dating schemes are based on assumed constancy in the rate of accumulation of this and, in some cases, also all other sedimentary components. The concepts used in rate evaluation are discussed with emphasis on the difference between the state of dissolution, an observable property of the sediment, and the rate of dissolution, a parameter that requires deduction of the carbonate fraction dissolved, and of the time differential. As a most likely cause of the enhanced state of dissolution of the interglacial carbonate sediments is proposed the lowered rates of biogenic production and deposition, which cause longer exposure of the carbonate microfossils to corrosion in the bioturbated surface layer of the sediment. Historical perspective is included in the discussion in view of the dedication of the Symposium to Hans Pettersson, the leader of the Swedish Deep Sea Expedition 1947-1948, an undertaking that opened a new era in deep sea research and planetary dynamics.

  13. Rate of production, dissolution and accumulation of biogenic solids in the ocean.

    PubMed

    Arrhenius, G

    1988-01-01

    The equatorial current system, by its response to global circulation changes, provides a unique recording mechanism for long range climatic oscillations. A permanent record of the changes in rate of upwelling and organic production is generated in the equatorial deep sea sediments, particularly by such biogenic components which are unaffected by secondary dissolution. In order to determine the rates of accumulation of various sedimentary components, a reliable differential measurement of age of the strata must be obtained. Various approaches to this problem are reviewed, and sources of error discussed. Secondary dissolution of calcium carbonate introduces a substantial and variable difference between the dissolution-modified, and hence a priori unknown, rate of deposition on one hand and the rate of accumulation, derivable from the observed concentration, on the other. The cause and magnitude of these variations are of importance, particularly since some current dating schemes are based on assumed constancy in the rate of accumulation of this and, in some cases, also all other sedimentary components. The concepts used in rate evaluation are discussed with emphasis on the difference between the state of dissolution, an observable property of the sediment, and the rate of dissolution, a parameter that requires deduction of the carbonate fraction dissolved, and of the time differential. As a most likely cause of the enhanced state of dissolution of the interglacial carbonate sediments is proposed the lowered rates of biogenic production and deposition, which cause longer exposure of the carbonate microfossils to corrosion in the bioturbated surface layer of the sediment. Historical perspective is included in the discussion in view of the dedication of the Symposium to Hans Pettersson, the leader of the Swedish Deep Sea Expedition 1947-1948, an undertaking that opened a new era in deep sea research and planetary dynamics.

  14. The distribution of the heavy metal accumulation rate in the biomass of three Daphnia species

    SciTech Connect

    Gajula, V.K.; Hovorka, J.; Stuchlik, E.

    1995-12-31

    The difference in the accumulation rate of a mixture of heavy metals in aquatic organisms is of considerable interest because of its importance in the prediction of the effect of pollutants in aquatic systems. In this study the authors are making an effort to evaluate the accumulation patterns of pollutants in aquatic organisms by establishing a relation between the level of an accumulated mixture of heavy metals (Cd, Zn, Pb, As, Hg) in individuals of Daphnia magna, Daphnia pulicaria and Daphnia galeata and its dry weight with respect to the form of heavy metals in the aquatic environment. One age group of Daphnia species (10 day old) were exposed to 5 ppb, 10 ppb and 20 ppb of the mixture of heavy metals for 24 hours in three different experiments. In the first experiment the mixture of heavy metals was present exclusively in labelled algae (Scendesmus actus), in the second in an aquatic medium with non labelled algae, and in the third experiment the mixture of heavy metals was dissolved in the aquatic medium only without the addition of algae. The concentration of the heavy metal mixture in individuals of D.magna; D.pulicaria and D.galeata was determined using atomic absorption spectrometry. Results were statistically evaluated and the rate of accumulation and influence of various heavy metals in the biomass of three Daphnia species is discussed.

  15. Comparison of carbon emission and accumulation rates in sub-arctic lakes

    NASA Astrophysics Data System (ADS)

    Lundin, Erik; Bastviken, David; Klaminder, Jonatan; Olid Garcia, Carolina; Karlsson, Jan

    2013-04-01

    Lakes play an important role for the carbon cycling in the sub-arctic landscape by both storing carbon in sediments and by releasing carbon to the atmosphere. Still, our knowledge regarding the importance of carbon accumulation rates vs. carbon emissions in lakes is poor, restricting large scale assessment of source sink potential of lakes in the landscape. In this study we compare annual carbon accumulation rates and CO2 and CH4 emissions to the atmosphere for six Swedish subarctic lakes. We measured the partial pressure of CO2 (every second hour) during the ice free season. CH4 emissions were measured using floating chambers. Furthermore, we sampled sediment cores from each lake (one to three cores per lake depending on lakes sizes) and calculated the recent accumulation rate of carbon into sediments by dating each core, using 210Pb. Total annual carbon emissions (CO2 + CH4) ranged between 5 to 54 g C m-2 yr-1; hence, all lakes were atmospheric net sources of carbon. Carbon emissions were overall dominated by CO2 which made up to over 90 % of the total annual carbon emission in all lakes except one, having low CO2 emission, where CH4 counted for 40% of the annual carbon emission. Sediment carbon accumulation rates were of comparable magnitudes as the emissions, counting for rates of 30 to 60% of the total carbon emission to the atmosphere. This results stress the dual role of subarctic lakes as they are acting both as atmospheric sources of CO2 and CH4 and as significant storages of carbon in sediments.

  16. Daily accumulation rates of marine debris on sub-Antarctic island beaches.

    PubMed

    Eriksson, Cecilia; Burton, Harry; Fitch, Stuart; Schulz, Martin; van den Hoff, John

    2013-01-15

    The worlds' oceans contain a large but unknown amount of plastic debris. We made daily collections of marine debris stranded at two sub-Antarctic islands to establish (a) physical causes of strandings, and (b) a sampling protocol to better estimate the oceans' plastic loading. Accumulation rates at some beaches were dependent on tide and onshore winds. Most of the 6389 items collected were plastic (Macquarie 95%, Heard 94%) and discarded or lost fishing gear comprised 22% of those plastic items. Stalked barnacles (Lepas spp.) were a regular attachment on Macquarie debris but not at Heard Island. The daily accumulation rate of plastic debris on Macquarie Island was an order of magnitude higher than that estimated from monthly surveys during the same 4 months in the previous 5 years. This finding suggests that estimates of the oceans' plastic loading are an order of magnitude too low.

  17. Trawling-induced alterations of deep-sea sediment accumulation rates during the Anthropocene

    NASA Astrophysics Data System (ADS)

    Puig, P.; Paradis, S.; Masque, P.; Martin, J.; Juan, X.; Palanques, A.

    2015-12-01

    Commercial bottom trawling causes direct physical disturbance of the marine sedimentary environments by scraping and ploughing the seabed, generating periodic resuspension of surface sediments. However, the quantification of the sediment that is removed by trawling and exported across the continental margin remains largely unaddressed, and the preservation of the signal of such impacts in the geological record have been mostly overlooked. The analysis of sediment cores collected along the Catalan margin (NW Mediterranean) has allowed evaluating the contribution of this anthropogenic activity to the present-day sediment dynamics. Sediment cores at intensively trawled sites are characterized by over-consolidated sediments with lower 210Pb surface concentrations and inventories that indicate widespread erosion of recent sedimentary deposits. In turn, combined 210Pb and 137Cs chronologies indicate a significant increase of sediment accumulation rates within submarine canyon environments since the 1970s, coincidently with a strong impulse in the industrialization of the trawling fleets of this region. Two sampling sites that exhibited high sediment accumulation rates (0.6-0.7 cm/y) were reoccupied 1-2 decades after the first studies and revealed a second and even larger increase of sediment accumulation rates (>2 cm/y) occurring at the beginning of the XXI century. This recent change has been attributed to a preferential displacement of the trawling fleet towards fishing grounds surrounding submarine canyons and, also, to technical improvements in trawling vessels, presumably related to financial subsidies provided to the fishing sector. The alteration of sediment accumulation rates described in this continental margin may occur in many regions of the World's oceans given the wide geographical distribution of this human activity, and therefore, it could represent a potential marker of the Anthropocene in deep-sea environments.

  18. Balancing sample accumulation and DNA degradation rates to optimize noninvasive genetic sampling of sympatric carnivores.

    PubMed

    Lonsinger, Robert C; Gese, Eric M; Dempsey, Steven J; Kluever, Bryan M; Johnson, Timothy R; Waits, Lisette P

    2015-07-01

    Noninvasive genetic sampling, or noninvasive DNA sampling (NDS), can be an effective monitoring approach for elusive, wide-ranging species at low densities. However, few studies have attempted to maximize sampling efficiency. We present a model for combining sample accumulation and DNA degradation to identify the most efficient (i.e. minimal cost per successful sample) NDS temporal design for capture-recapture analyses. We use scat accumulation and faecal DNA degradation rates for two sympatric carnivores, kit fox (Vulpes macrotis) and coyote (Canis latrans) across two seasons (summer and winter) in Utah, USA, to demonstrate implementation of this approach. We estimated scat accumulation rates by clearing and surveying transects for scats. We evaluated mitochondrial (mtDNA) and nuclear (nDNA) DNA amplification success for faecal DNA samples under natural field conditions for 20 fresh scats/species/season from <1-112 days. Mean accumulation rates were nearly three times greater for coyotes (0.076 scats/km/day) than foxes (0.029 scats/km/day) across seasons. Across species and seasons, mtDNA amplification success was ≥95% through day 21. Fox nDNA amplification success was ≥70% through day 21 across seasons. Coyote nDNA success was ≥70% through day 21 in winter, but declined to <50% by day 7 in summer. We identified a common temporal sampling frame of approximately 14 days that allowed species to be monitored simultaneously, further reducing time, survey effort and costs. Our results suggest that when conducting repeated surveys for capture-recapture analyses, overall cost-efficiency for NDS may be improved with a temporal design that balances field and laboratory costs along with deposition and degradation rates.

  19. Organic Carbon, Nitrogen and Phosphorus Accumulation Rates in the Soils of the Everglades Mangrove Ecotone

    NASA Astrophysics Data System (ADS)

    Smoak, J. M.; Breithaupt, J. L.; Sanders, C. J.

    2015-12-01

    One of the fundamental questions with regard to coastal ecotones relates to their role in the transformation, transport and storage of biogeochemically important constituents and how that role may be altered by climate change. Coastal wetlands provide a range of valuable ecosystem services including sequestering organic carbon (OC) and nutrients in their soils at rates greater than terrestrial ecosystems on a per area basis. As such the Everglades mangrove ecotone, the largest contiguous mangrove forest in North America, is a biogeochemical "hotspot" at the interface of freshwater marsh and the Gulf of Mexico. Over the last one hundred years this region has been impacted by a reduction in freshwater flow and a sea-level rise (SLR) of 2.3 mm/yr which combined to cause a landward shift in the ecotone. This creates an ideal setting to examine climate induced alterations in the mangrove-ecotone biogeochemical cycle. The ability of the Everglades mangrove forest to keep pace with SLR depends largely on the rate of organic matter accumulation as that accumulation is a key contributor to accretion. However, the basic threat from SLR can be exacerbated in some areas by accelerating organic matter mineralization due to increasing salinity. The increase in salinity supplies sulfate which functions as a terminal electron acceptor that soil microbes can utilize to enhance mineralization in the brackish ecotone regions of coastal wetlands. To investigate these processes, we measured mangrove forest soil accretion, OC, N and P accumulation rates over the most recent 10, 50 and 100 year periods (via 210Pb dating) from the Gulf of Mexico to the upper freshwater reaches of the mangrove forest within Everglades National Park. Lower organic carbon accumulation rates compared to the rest of the system were found in the ecotone region most susceptible to enhanced organic matter mineralization.

  20. The amount and accumulation rate of plastic debris on marshes and beaches on the Georgia coast.

    PubMed

    Lee, Richard F; Sanders, Dorothea P

    2015-02-15

    The amount and accumulation rate of plastic debris at 20 sites along the Georgia coast were prepared using data reported by a number of volunteer organizations. The amount of plastic debris at highly visited barrier island beaches and estuarine marshes ranged from 300 to >1000 kg. Relatively large amount of plastics (180-500 kg) were found on less visited barrier island beaches, i.e. Blackbeard, Ossabaw and Cumberland Islands. A follow up monthly or quarterly collection study was carried out on two of the sites, a barrier beach and estuarine marsh, to determine accumulation rate in 8000 m(2) areas. Accumulation rates ranged from 0.18 to 1.28 kg/30 days-8000 m(2) on the barrier island beach and from 0.6 to 1.61 kg/30 days-8000 m(2) at the estuarine marsh site. The major type of plastics, e.g. bottles, food wrappers, plastic fragments, was highly variable at different seasons and sites. The authors recommend consideration of a standardization in reporting plastic debris, with respect to quantitation of debris and sample area.

  1. Accumulation rate and mixing of shelf sediments in the Monterey Bay National Marine Sanctuary

    USGS Publications Warehouse

    Lewis, R.C.; Coale, K.H.; Edwards, B.D.; Marot, M.; Douglas, J.N.; Burton, E.J.

    2002-01-01

    The distribution of excess 210Pb in 31 sediment cores was used to determine modern (last 100 yr) mass accumulation rates and the depth of sediment mixing on the continental shelf between Pacifica and Monterey, California, USA. Apparent mass accumulation rates average 0.27 g cm-2 yr-1 and range from 0.42 g cm-2 yr-1 to 0.12 g cm-2 yr-1. Accumulation rates were highest at mid-shelf water depths (60-100 m) adjacent to major rivers and near the head of the Ascension submarine canyon. Cores from water depths of less than 65 m had low, uniform 210Pb activity profiles and sandy textures. The uppermost 5-13 cm of 15 cores had uniform 210Pb activity profiles above a region of steadily decreasing 210Pb activity. This phenomenon was attributed to sediment mixing. The thickness of this upper layer of uniform 210Pb activity decreased southward from 13 cm, west of Pacifica, to less than 5 cm, near Monterey Canyon. This southward decrease may be attributed to shallower bioturbation in the southern study area. Integrated excess 210Pb activities were generally higher where sedimentation rates were high. They were also higher with increasing distance from major rivers. Thus, sedimentation rate alone does not explain the distribution of integrated excess 210Pb in this study area. Excess 210Pb in the seafloor is controlled by other factors such as sediment texture, the atmospheric deposition rate of 210Pb, and the residence time of sediment particles in the water column. ?? 2002 Elsevier Science B.V. All rights reserved.

  2. Fossils and a large molecular phylogeny show that the evolution of species richness, generic diversity, and turnover rates are disconnected.

    PubMed

    Xing, Yaowu; Onstein, Renske E; Carter, Richard J; Stadler, Tanja; Peter Linder, H

    2014-10-01

    The magnitude and extent of global change during the Cenozoic is remarkable, yet the impacts of these global changes on the biodiversity and evolutionary dynamics of species diversification remain poorly understood. To investigate this question, we combine paleontological and neontological data for the angiosperm order Fagales, an ecologically important clade of about 1370 species of trees with an exceptional fossil record. We show differences in patterns of accumulation of generic diversity, species richness, and turnover rates for Fagales. Generic diversity evolved rapidly since the Late Cretaceous and peaked during the Eocene or Oligocene. Turnover rates were high during periods of extreme global climate change, but relatively low when the climate remained stable. Species richness accumulated gradually throughout the Cenozoic, possibly at an accelerated pace after the Middle Miocene. Species diversification occurred in new environments: Quercoids radiating in Oligocene subtropical seasonally arid habitats, Casuarinaceae in Australian pyrophytic biomes, and Betula in Late Neogene holarctic habitats. These radiations were counterbalanced by regional extinctions in Late Neogene mesic warm-temperate forests. Thus, the overall diversification at species level is linked to regional radiations of clades with appropriate ecologies exploiting newly available habitats.

  3. Genes Translocated into the Plastid Inverted Repeat Show Decelerated Substitution Rates and Elevated GC Content

    PubMed Central

    Li, Fay-Wei; Kuo, Li-Yaung; Pryer, Kathleen M.; Rothfels, Carl J.

    2016-01-01

    Plant chloroplast genomes (plastomes) are characterized by an inverted repeat (IR) region and two larger single copy (SC) regions. Patterns of molecular evolution in the IR and SC regions differ, most notably by a reduced rate of nucleotide substitution in the IR compared to the SC region. In addition, the organization and structure of plastomes is fluid, and rearrangements through time have repeatedly shuffled genes into and out of the IR, providing recurrent natural experiments on how chloroplast genome structure can impact rates and patterns of molecular evolution. Here we examine four loci (psbA, ycf2, rps7, and rps12 exon 2–3) that were translocated from the SC into the IR during fern evolution. We use a model-based method, within a phylogenetic context, to test for substitution rate shifts. All four loci show a significant, 2- to 3-fold deceleration in their substitution rate following translocation into the IR, a phenomenon not observed in any other, nontranslocated plastid genes. Also, we show that after translocation, the GC content of the third codon position and of the noncoding regions is significantly increased, implying that gene conversion within the IR is GC-biased. Taken together, our results suggest that the IR region not only reduces substitution rates, but also impacts nucleotide composition. This finding highlights a potential vulnerability of correlating substitution rate heterogeneity with organismal life history traits without knowledge of the underlying genome structure. PMID:27401175

  4. Systems Level Regulation of Rhythmic Growth Rate and Biomass Accumulation in Grasses

    SciTech Connect

    Kay, Steve A.

    2013-05-02

    Several breakthroughs have been recently made in our understanding of plant growth and biomass accumulation. It was found that plant growth is rhythmically controlled throughout the day by the circadian clock through a complex interplay of light and phytohormone signaling pathways. While plants such as the C4 energy crop sorghum (Sorghum bicolor (L.) Moench) and possibly the C3 grass (Brachypodium distachyon) also exhibit daily rhythms in growth rate, the molecular details of its regulation remain to be explored. A better understanding of diurnally regulated growth behavior in grasses may lead to species-specific mechanisms highly relevant to future strategies to optimize energy crop biomass yield. Here we propose to devise a systems approach to identify, in parallel, regulatory hubs associated with rhythmic growth in C3 and C4 plants. We propose to use rhythmicity in daily growth patterns to drive the discovery of regulatory network modules controlling biomass accumulation.

  5. LATE CENOZOIC INCREASE IN ACCUMULATION RATES OF TERRESTRIAL SEDIMENT: How Might Climate Change Have Affected Erosion Rates?

    NASA Astrophysics Data System (ADS)

    Molnar, Peter

    2004-05-01

    Accumulation rates of terrestrial sediment have increased in the past few million years both on and adjacent to continents, although not everywhere. Apparently, erosion has increased in elevated terrain regardless of when last tectonically active or what the present-day climate. In many regions, sediment coarsened abruptly in late Pliocene time. Sparser data suggest increased sedimentation rates at 15 Ma, approximately when oxygen isotopes in benthic foraminifera imply high-latitude cooling. If climate change effected accelerated erosion, understanding how it did so remains the challenge. Some obvious candidates, such as lowered sea level leading to erosion of continental shelves or increased glaciation, account for increased sedimentation in some, but not all, areas. Perhaps stable climates that varied slowly allowed geomorphic processes to maintain a state of equilibrium with little erosion until 34 Ma, when large oscillations in climate with periods of 20,00040,000 years developed and denied the landscape the chance to reach equilibrium.

  6. Radionuclide activities, geochemistry, and accumulation rates of sediments in the Gulf of Thailand

    NASA Astrophysics Data System (ADS)

    Srisuksawad, Kanitha; Porntepkasemsan, Boonsom; Nouchpramool, Sunun; Yamkate, Pathom; Carpenter, Roy; Peterson, Michael L.; Hamilton, Terry

    1997-07-01

    Downcore concentration profiles of 210Pb, U, and Th isotopes, Al, Fe, Ti, Mn and Sc were measured in sediment box cores collected at 22 stations (16-70 m water depth) covering most of the Thai zone of the Gulf of Thailand. Distributions of excess 210Pb and the detrital elements were used to study spatial variations in sedimentary processes, mineralogy, and geochemistry between different regions of the gulf. Steady-state depositional concentrations and fluxes of excess 210Pb are 3-10 times lower in Gulf of Thailand sediments than in sediments from mid-latitudes in the northern hemisphere, reflecting lower 210Pb inputs from atmospheric fallout at 6-13°N latitude and from lower production of 210Pb from 226Ra in the shallower waters of the Gulf. U and Th concentrations are approximately 2-3 times higher than those in shelf sediments from mid-latitudes of North America, consistent with a higher proportion of granitic source rocks in the Thai environment. Downcore variations in 228Th/ 232Th activity ratios and in U activities reveal that exchange of interstitial and overlying waters and their dissolved chemicals occurs down to 20 cm in 8 of 10 cores. This benthic exchange may be important in budgets of fluxes of other soluble chemicals in this shallow shelf sea. A net flux of U isotopes from overlying water into Gulf of Thailand sediments occurs, in contrast to their release from sediments of the tropical Amazon shelf. Detectable levels of 137Cs were found only in sediments near the mouth of the largest river, the Chao Phraya. The detrital elements 232Th, 230Th, Al, Ti, and Sc all show relatively uniform downcore concentration profiles. This supports a key assumption in calculations of sediment accumulation rates from downcore profiles of 210Pb activity, that steady-state depositional conditions exist and that basic sediment mineralogy and grain size does not change. 210Pb model derived mass accumulation rates vary between 270 and 490 mg/cm 2 per year in the upper Gulf

  7. Early phase tumor accumulation of macromolecules: a great difference in clearance rate between tumor and normal tissues.

    PubMed

    Noguchi, Y; Wu, J; Duncan, R; Strohalm, J; Ulbrich, K; Akaike, T; Maeda, H

    1998-03-01

    The objective of this study was to investigate the molecular weight (MW) and time-dependence of the phenomenon termed "the enhanced permeability and retention" (EPR) effect in solid tumor, in particular to determine and define the early phase accumulation of macromolecules in tumor and normal tissues and the relationship between blood concentration and tissue clearance. As a model, radioiodinated N-(2-hydroxypropyl)methacrylamide (HPMA) copolymers of MW ranging from 4.5 K to 800 K were administered i.v. to mice bearing sarcoma 180 tumor. Within 10 min all HPMA copolymers accumulated effectively in the tumor regardless of MW (1.0-1.5% of injected dose per g of tumor). However, higher MW copolymers (> 50 K) showed significantly increased tumor accumulation after 6 h, while the lower MW copolymers (< 40 K) were cleared rapidly from tumor tissue due to rapid diffusion back into the bloodstream. Blood clearance was also MW-dependent; the lower MW copolymers displayed rapid clearance, with kidney radioactivity of the copolymers of MW < 20 K representing 24% of injected dose per g kidney at 1 min after i.v. administration. Within 10 min these copolymers passed through the kidney and were excreted in the urine. Higher MW copolymers consistently showed kidney levels of 3-5% dose per g kidney in the early phase with no time-dependent accumulation in kidney. There was also no progressive accumulation in muscle or liver, regardless of polymer MW. These results suggest the "EPR effect" in solid tumor primarily arises from in the difference in clearance rate between the solid tumor and the normal tissues after initial penetration of the polymers into these tissues.

  8. Impact of Megadunes and Glaze Areas on Estimates of East Antarctic Mass Balance and Accumulation Rate Change

    NASA Astrophysics Data System (ADS)

    Scambos, T. A.; Fahnestock, M. A.; Shuman, C.; Haran, T. M.

    2006-12-01

    for megadunes, glaze regions, and undulations in East Antarctica (and elsewhere) may also impact estimates of changes in accumulation rate (changes in surface elevation due to accumulation increase or decrease) when those changes are made by satellite radar altimeters (e.g. Davis et al, 2005). Previous studies have demonstrated that the broad footprint of satellite radar altimeters interacts preferentially with local highs in the topography; however, local highs show an amplified accumulation signal relative to the regional net surface flux. Therefore, changes in the net surface flux would also be amplified at the local crests, and could cause satellite radar change detection values to be overestimated. We present a simple model of this effect based on the megadune field measurements.

  9. Holocene sediment accumulation rates in fjords and bays of Chilean Patagonia and the Antarctic Peninsula

    NASA Astrophysics Data System (ADS)

    Wellner, J. S.; Anderson, J. B.; Milliken, K.; Fernandez, R.; Michalchuk, B.; Boyd, B.

    2007-12-01

    Beginning in 2005 and ending in May of 2007, we completed a series of four research cruises in the fjords and bays of Chilean Patagonia and the Antarctic Peninsula aimed, in part, at determining the style and rate of Holocene sediment accumulation in a range of glacial settings. Our original hypothesis stated that rates of glacial erosion are a function of sliding speed, and are therefore expected to diminish sharply as basal temperatures drop below the melting point. To test this hypothesis, we measured sediment accumulation in tidewater glacier fjords ranging from fast-moving temperate glaciers in Patagonia to slower moving polar glaciers on the Antarctic Peninsula. Four fjords were surveyed in Patagonia ranging from San Rafael fjord in the Northern Patagonia ice field to Marinelli fjord in Tierra del Fuego. The cruises to the Antarctic Peninsula included two SHALDRIL legs during which drill cores recovered 108 m and 80 m of Holocene sediment in Maxwell Bay, South Shetland Islands, and the Firth of Tay in the northwestern Weddell Sea, respectively. An additional nine fjords across the northern peninsula were surveyed with kasten and jumbo piston cores. To date, we have completed nearly 100 radiocarbon dates from fossil carbonate material, both shells and foraminifera, extracted from the sediment cores obtained in these fjords. Our initial results highlight the complexity of the controls on sediment yields and the extreme variability in sediment accumulation amongst fjords. While climate may be the first order control on glacier erosion rates and sediment transport to bays and fjords, several other factors must significantly influence these processes and may mask the broader signal. Our ongoing work with this newly acquired comprehensive dataset is examining additional controls including drainage basin size, precipitation gradient, altitude of the glaciers, and glacial substrate.

  10. Rates of vaccine evolution show strong effects of latency: implications for varicella zoster virus epidemiology.

    PubMed

    Weinert, Lucy A; Depledge, Daniel P; Kundu, Samit; Gershon, Anne A; Nichols, Richard A; Balloux, Francois; Welch, John J; Breuer, Judith

    2015-04-01

    Varicella-zoster virus (VZV) causes chickenpox and shingles, and is found in human populations worldwide. The lack of temporal signal in the diversity of VZV makes substitution rate estimates unreliable, which is a barrier to understanding the context of its global spread. Here, we estimate rates of evolution by studying live attenuated vaccines, which evolved in 22 vaccinated patients for known periods of time, sometimes, but not always undergoing latency. We show that the attenuated virus evolves rapidly (∼ 10(-6) substitutions/site/day), but that rates decrease dramatically when the virus undergoes latency. These data are best explained by a model in which viral populations evolve for around 13 days before becoming latent, but then undergo no replication during latency. This implies that rates of viral evolution will depend strongly on transmission patterns. Nevertheless, we show that implausibly long latency periods are required to date the most recent common ancestor of extant VZV to an "out-of-Africa" migration with humans, as has been previously suggested.

  11. Rates of Vaccine Evolution Show Strong Effects of Latency: Implications for Varicella Zoster Virus Epidemiology

    PubMed Central

    Weinert, Lucy A.; Depledge, Daniel P.; Kundu, Samit; Gershon, Anne A.; Nichols, Richard A.; Balloux, Francois; Welch, John J.; Breuer, Judith

    2015-01-01

    Varicella-zoster virus (VZV) causes chickenpox and shingles, and is found in human populations worldwide. The lack of temporal signal in the diversity of VZV makes substitution rate estimates unreliable, which is a barrier to understanding the context of its global spread. Here, we estimate rates of evolution by studying live attenuated vaccines, which evolved in 22 vaccinated patients for known periods of time, sometimes, but not always undergoing latency. We show that the attenuated virus evolves rapidly (∼10−6 substitutions/site/day), but that rates decrease dramatically when the virus undergoes latency. These data are best explained by a model in which viral populations evolve for around 13 days before becoming latent, but then undergo no replication during latency. This implies that rates of viral evolution will depend strongly on transmission patterns. Nevertheless, we show that implausibly long latency periods are required to date the most recent common ancestor of extant VZV to an “out-of-Africa” migration with humans, as has been previously suggested. PMID:25568346

  12. The impact of EDTA on the rate of accumulation and root/shoot partitioning of cadmium in mature dwarf sunflowers.

    PubMed

    Meighan, Michelle M; Fenus, Taressa; Karey, Emma; MacNeil, Joseph

    2011-06-01

    In addition to increasing the mobility of metal ions in the soil solution, chelating agents such as EDTA have been reported to alter both the total metal accumulated by plants and its distribution within the plant structures. Here, mature Mini-Sun Hybrid dwarf sunflowers exposed to 300 μM Cd(2+) in hydroponic solution had initial translocation rates of at least 0.12 mmol kg(-1)h(-1) and reached leaf saturation levels within a day when a 3-fold molar excess of EDTA was used. EDTA also promoted cadmium transfer from roots to the shoots. A threefold excess of EDTA increased the translocation factor (TF) 100-fold, resulting in cadmium levels in the leaves of 580 μg g(-1) and extracting 1400 μg plant(-1). When plants were exposed to dissolved cadmium without EDTA, the vast majority of the metal remained bound to the exterior of the root. The initial accumulation could be successfully modeled with a standard biosorption pseudo second-order kinetic equation. Initial accumulation rates ranged from 0.0359 to 0.262 mg g(-1)min(-1). The cadmium binding could be cycled, and did not show evidence of saturation under the experimental conditions employed, suggesting it might be a viable biosorbant for aqueous cadmium.

  13. Rapid Changes on Sediment Accumulation Rates within Submarine Canyons Caused By Bottom Trawling Activities

    NASA Astrophysics Data System (ADS)

    Puig, P.; Masque, P.; Martin, J.; Paradis, S.; Juan, X.; Toro, M.; Palanques, A.

    2014-12-01

    The physical disturbance of the marine sedimentary environments by commercial bottom trawling is a matter of concern. The direct physical effects of this fishing technique include scraping and ploughing of the seabed and increases of the near-bottom water turbidity by sediment resuspension. However, the quantification of the sediment that has been resuspended by this anthropogenic activity over years and has been ultimately exported across the margin remains largely unaddressed. The analysis of sediment accumulation rates from sediment cores collected along the axes of several submarine canyons in the Catalan margin (northwestern Mediterranean) has allowed to estimate the contribution of this anthropogenic activity to the present-day sediment dynamics. 210Pb chronologies, occasionally supported by 137Cs dating, indicate a rapid increase of sediment accumulation rates since the 1970s, in coincidence with a strong impulse in the industrialization of the trawling fleets of this region. Such increase has been associated to the enhanced delivery of sediment resuspended by trawlers from the shelves and upper slope regions towards the canyon's interior, and to the rapid technical development at that time, in terms of engine power and gear size. This change has been observed in La Fonera (or Palamós) Canyon at depths greater than 1700 m, while in other canyons it is restricted to shallower regions (~1000 m in depth) closer to fishing grounds. Two sampling sites from La Fonera and Foix submarine canyons that exhibited high sediment accumulation rates (0.6-0.7 cm/y) were reoccupied several years after the first chronological analyses. These two new cores reveal a second and more rapid increase of sediment accumulation rates in both canyons occurring circa 2002 and accounting for about 2 cm/y. This second change at the beginning of the XXI century has been attributed to a preferential displacement of the trawling fleet towards slope fishing grounds surrounding submarine

  14. Ages and Accumulation Rates of the Martian Polar Layered Deposits Estimated from Orbital Tuning

    NASA Astrophysics Data System (ADS)

    Sori, M.; Bailey, E. A.; Perron, J.; Huybers, P. J.; Aharonson, O.; Limaye, A.

    2013-12-01

    Layers of dusty water ice in the polar caps of Mars have been hypothesized to record climate changes driven by variation of the planet's orbit and spin axis, but the time interval over which the polar layered deposits (PLDs) formed is unknown, and an orbital influence has not been conclusively demonstrated. We performed orbital tuning of reconstructed PLD stratigraphic sequences in an attempt to constrain the accumulation interval and test for the presence of an orbital signal. Our procedure uses dynamic time warping (DTW) to search for a match between two time series - the polar insolation history and brightness or topographic information in the PLDs - and then assesses the significance of potential matches using a Monte Carlo procedure. We selected 30 images of the northern PLDs from the Mars Orbiter Camera (MOC) aboard the Mars Global Surveyor spacecraft and used Mars Orbiter Laser Altimeter profiles to transform each image into a record of image brightness as a function of vertical depth. To constrain the PLD age and accumulation rate, we tuned each image record to Martian insolation records for varying time intervals. If a particular insolation interval produced the strongest match to an image, and if the match became weaker as the image was tuned to progressively longer or shorter intervals, we chose the best-fitting interval as an estimated accumulation time for that PLD sequence, and used the depth range to estimate a corresponding PLD accumulation rate. We also tuned the insolation records to synthetic records containing no orbital influence to test whether the image matches were spurious. Of the 30 MOC images analyzed, 16 produce insolation intervals that we consider strong matches. These images yield an average deposition rate of 0.5 × 0.2 mm/yr for the northern PLDs. The images represent only a fraction of the entire stratigraphy; extrapolating that deposition rate farther back in time yields an age of ~4 Ma for the entire PLD sequence present in the

  15. Historical accumulation rates of mercury in four Scottish ombrotrophic peat bogs over the past 2000 years.

    PubMed

    Farmer, John G; Anderson, Peter; Cloy, Joanna M; Graham, Margaret C; MacKenzie, Angus B; Cook, Gordon T

    2009-10-15

    The historical accumulation rates of mercury resulting from atmospheric deposition to four Scottish ombrotrophic peat bogs, Turclossie Moss (northeast Scotland), Flanders Moss (west-central), Red Moss of Balerno (east-central) and Carsegowan Moss (southwest), were determined via analysis of (210)Pb- and (14)C-dated cores up to 2000 years old. Average pre-industrial rates of mercury accumulation of 4.5 and 3.7 microg m(-2) y(-1) were obtained for Flanders Moss (A.D. 1-1800) and Red Moss of Balerno (A.D. 800-1800), respectively. Thereafter, mercury accumulation rates increased to typical maximum values of 51, 61, 77 and 85 microg m(-2) y(-1), recorded at different times possibly reflecting local/regional influences during the first 70 years of the 20th century, at the four sites (TM, FM, RM, CM), before declining to a mean value of 27+/-15 microg m(-2) y(-1) during the late 1990s/early 2000s. Comparison of such trends for mercury with those for lead and arsenic in the cores and also with direct data for the declining UK emissions of these three elements since 1970 suggested that a substantial proportion of the mercury deposited at these sites over the past few decades originated from outwith the UK, with contributions to wet and dry deposition arising from long-range transport of mercury released by sources such as combustion of coal. Confidence in the chronological reliability of these core-derived trends in absolute and relative accumulation of mercury, at least since the 19th century, was provided by the excellent agreement between the corresponding detailed and characteristic temporal trends in the (206)Pb/(207)Pb isotopic ratio of lead in the (210)Pb-dated Turclossie Moss core and those in archival Scottish Sphagnum moss samples of known date of collection. The possibility of some longer-term loss of volatile mercury released from diagenetically altered older peat cannot, however, be excluded by the findings of this study.

  16. Field studies using the oyster Crassostrea virginica to determine mercury accumulation and depuration rates

    SciTech Connect

    Palmer, S.J.; Presley, B.J.; Powell, E.N. ); Taylor, R.J. )

    1993-09-01

    Mercury as an environmental hazard, especially with regard to human health, has been of concern since the Minamata disaster. From 1966 to 1970 a chlor-alkali plant in Point Comfort, Texas released mercury-enriched wastewater (up to 29.9 kgHg/day) into Lavaca Bay (TWQB 1977). Since 1970 the Texas Department of Health (TDH) has periodically closed and then re-opened portions of Lavaca Bay to the harvesting of crabs and finfish based on their levels (<>0.5 ppm Hg wet weight) of mercury. A 1988 closure remains in effect as of this writing. Mercury contamination in Lavaca Bay organisms thus continues to be a problem 22 years after the chlor-alkali plant ceased releasing mercury into the bay. The goal of the following research was to better understand the behavior of mercury in Lavaca Bay. Oysters have been widely used as indicator species in metal pollution studies. Most such programs have focused on the concentrations of metals in oysters from different geographic areas. This study, however, investigated the rate and amount of mercury a [open quotes]clean[close quotes] oyster would accumulate when transplanted to a contaminated estuary and the rate of mercury depuration by contaminated oysters placed in a clean environment. The oysters were additionally analyzed for Ba, Cu, Fe, P, and Zn to test for the possible involvement of these metals in mercury accumulation and depuration. 17 refs., 3 figs., 2 tabs.

  17. Accumulation of cAMP augments dynamic vagal control of heart rate.

    PubMed

    Nakahara, T; Kawada, T; Sugimachi, M; Miyano, H; Sato, T; Shishido, T; Yoshimura, R; Miyashita, H; Inagaki, M; Alexander, J; Sunagawa, K

    1998-08-01

    Recent investigations in our laboratory using a Gaussian white noise perturbation technique have shown that simultaneous sympathetic stimulation augmented the gain of the transfer function from vagal stimulation frequency to heart rate response. However, the mechanism of that augmentation remains to be elucidated. In this study, we examined in anesthetized rabbits how three pharmacological interventions known to cause intracellular accumulation of cAMP affected the transfer function. Isoproterenol (0.3 microg . kg-1 . min-1 iv) increased the dynamic gain of transfer function from 7.12 +/- 0.67 to 12.4 +/- 1.21 beats . min-1 . Hz-1 (P < 0.05) without changing the corner frequency or the lag time. Similar augmentations were observed when forskolin (5 microg . kg-1 . min-1 iv) or theophylline (20 mg/kg iv) was administered under conditions of beta-adrenergic blockade. These results suggest that the accumulation of cAMP at postjunctional effector sites contributes, at least in part, to the sympathetic augmentation of the dynamic vagal control of heart rate.

  18. Carbon accumulation rates and the origin of the Holocene sapropel in the Black Sea

    NASA Astrophysics Data System (ADS)

    Calvert, S. E.; Vogel, J. S.; Southon, J. R.

    1987-10-01

    A detailed radiocarbon chronology obtained by accelerator mass spectrometry together with organic carbon and carbonate measurements on two Black Sea cores has been used to compare and contrast the burial fluxes of organic carbon in the Holocene sapropel and the modern sediment. At both deep-water and eastern-slope sites, the sapropel is separated from the modern facies by a variable thickness of compositionally homogeneous sediment with low levels of organic carbon and anomalously old radiocarbon ages. This homogeneous unit probably represents deposition by slumping or mudflow. The age limits of the sapropel are 1600 6600 B.P. at the deep-water site and 4000 6000 B.P. (radiocarbon years before 1950 A.D.) at the shallow-water site. The carbon accumulation rate in the deep-water sapropel is higher than that in the modern deep-water facies by a factor of 2 and is approximately the same as that in the modern sediment in shallow water. The revised chronology of sapropel formation and the differences in the carbon accumulation rates probably indicate that the sapropel was formed by increased production during the transition from the premodern lake to the modern marine phases of the Black Sea. This conclusion is consistent with the clear marine carbon-isotope signal in the organic matter in the sapropel in both cores (results to be reported elsewhere), in contrast to the mixed source of carbon in the other facies.

  19. Modern rates of glacial sediment accumulation along a 15° S-N transect in fjords from the Antarctic Peninsula to southern Chile

    NASA Astrophysics Data System (ADS)

    Boldt, Katherine V.; Nittrouer, Charles A.; Hallet, Bernard; Koppes, Michele N.; Forrest, Brittany K.; Wellner, Julia S.; Anderson, John B.

    2013-12-01

    of glacial erosion in temperate climates rank among the highest worldwide, and the sedimentary products of such erosion record climatic and tectonic signals in many glaciated settings, as well as temporal changes in glacier behavior. Glacial sediment yields are expected to decrease with increasing latitude because decreased temperature and meltwater production reduce glacial sliding, erosion, and sediment transfer; however, this expectation lacks a solid supportive database. Herein we present modern 210Pb-derived sediment accumulation rates on decadal to century time scales for 12 fjords spanning 15° of latitude from the Antarctic Peninsula to southern Chile and interpret the results in light of glacimarine sediment accumulation worldwide. 210Pb records from the Antarctic Peninsula show surprisingly steady sediment accumulation throughout the past century at rates of 1-7 mm yr-1, despite rapid warming and glacial retreat. Cores from the South Shetland Islands reveal accelerated sediment accumulation over the past few decades, likely due to changes in the thermal state of the glaciers in this region, which straddles the boundary between subpolar and temperate conditions. In Patagonia and Tierra del Fuego, sediment accumulates faster (11-24 mm yr-1), and previously collected seismic profiles show that rates reach meters per year close to the glacier termini. This increase in sediment accumulation rates with decreasing latitude reflects the gradient from subpolar to temperate climates and is consistent with glacial erosion being much faster in the temperate climate of southern Chile than in the polar climate of the Antarctic Peninsula.

  20. Spatial and temporal variability of snow accumulation rate at East Antarctic ice sheet in 1993-2010

    NASA Astrophysics Data System (ADS)

    Motoyama, H.; Suzuki, K.; Yamanouchi, T.; Kawamura, K.

    2012-04-01

    Snow stakes along the traverse routes have been observed for long term monitoring program 'the variation of ice sheet surface mass balance' from the 1960's by the Japanese Antarctic Research Expedition in Shirase glacier drainage basin, East Antarctica. During the traverse route between coastal S16 point (69 02'S, 40 03'E, 580m a.s.l.) to inland Dome Fuji (77 22'S, 39 42'E, 3,810m a.s.l.), the snow stake observations every 2 km have been carried out from 1993. Latest stake heights were measured in January 2011 and February 2011. Yearly net snow accumulations from S16 to Dome Fuji were calculated. Heavy snow events were shown in 1998, 2004, 2005, 2008-2009 and 2010. Otherwise, in 1994, 1996, 1999, 2000, 2001, 2002 and 2006, light snow events were observed. They were different in way accumulating spatial pattern depending on places. The yearly accumulation rates were compared with seasonal change of AAO-index (SAM). As a result, yearly accumulation rate and AAO-index showed the positive correlation. We would indicate the spatial distributions of air parcel origins. So we calculate air transport by using the NITRAM trajectory model (Tomikawa and Sato, 2005) and ERA-Interim meteorological data set in 1990-2009. The time duration is 5 days and we suppose the origin of air parcel is the point of trajectory at 5 days ago. The starting points are distributed on 1 deg. x 1 deg. grids over Antarctica and its altitude is 1,300m above the surface. We indicate the spatial distributions of air parcel origins to Antarctica. If there were high ratios of sea origin atmosphere in the inland, there was much snow. It is indicated that the humid air from the sea is the main origin of snowfall. But such relations were not seen on the coast. We try to understand the cause of heavy snow and light snow event.

  1. Glacio-chemical study spanning the past 2 kyr on three ice cores from Dronning Maud Land, Antarctica 1. Annually resolved accumulation rates

    NASA Astrophysics Data System (ADS)

    Sommer, S.; Appenzeller, C.; Röthlisberger, R.; Hutterli, M. A.; Stauffer, B.; Wagenbach, D.; Oerter, H.; Wilhelms, F.; Miller, H.; Mulvaney, R.

    2000-12-01

    For the first time, annually resolved accumulation rates have been determined in central Antarctica by means of counting seasonal signals of ammonium, calcium, and sodium. All records, obtained from three intermediate depth ice cores from Dronning Maud Land, East Antarctica, show rather constant accumulation rates throughout the last 9 centuries with mean values of 63, 61, and 44 mm H2Oyr-1 and a typical year-to-year variation of about 30%. For the last few decades, no trend was detected accounting for the high natural variability of all records. A significant weak intersite correlation is apparent only between two cores when the high-frequency part with periods less than 30 years is removed. By analyzing the records in the frequency domain, no persistent periods were found. This suggests that the snow accumulation in this area is mainly influenced by local deposition patterns and may be additionally masked by redistribution of snow due to wind. By comparing accumulation rates over the last 2 millennia a distinct change in the layer thickness in one of the three cores was found, which might be attributed either to an area upstream of the drilling site with lower accumulation rates, or to deposition processes influenced by surface undulations. The missing of a clear correlation between the accumulation rate histories at the three locations is also important for the interpretation of small, short time variations of past precipitation records obtained from deep ice cores.

  2. Variation of Accumulation Rates Over the Last Eight Centuries on the East Antarctic Plateau Derived from Volcanic Signals in Ice Cores

    NASA Technical Reports Server (NTRS)

    Anschuetz, H.; Sinisalo, A.; Isaksson, E.; McConnell, J. R.; Hamran, S.-E.; Bisiaux, M. M.; Pasteris, D.; Neumann, T. A.; Winther, J.-G.

    2011-01-01

    Volcanic signatures in ice-core records provide an excellent means to date the cores and obtain information about accumulation rates. From several ice cores it is thus possible to extract a spatio-temporal accumulation pattern. We show records of electrical conductivity and sulfur from firn cores from the Norwegian-USA scientific traverse during the International Polar Year 2007-2009 (IPY) through East Antarctica. Major volcanic eruptions are identified and used to assess century-scale accumulation changes. The largest changes seem to occur in the most recent decades with accumulation over the period 1963- 2007/08 being up to 25 % different from the long-term record. There is no clear overall trend, some sites show an increase in accumulation over the period 1963 to present while others show a decrease. Almost all of the sites above 3200 m above sea level (asl) suggest a decrease. These sites also show a significantly lower accumulation value than large-scale assessments both for the period 1963 to present and for the long-term mean at the respective drill sites. The spatial accumulation distribution is influenced mainly by elevation and distance to the ocean (continentality), as expected. Ground-penetrating radar data around the drill sites show a spatial variability within 10-20 % over several tens of kilometers, indicating that our drill sites are well representative for the area around them. Our results are important for large-scale assessments of Antarctic mass balance and model validation.

  3. Bounding the rate of moment deficit accumulation along the Tohoku segment using GEONET GPS data

    NASA Astrophysics Data System (ADS)

    Segall, P.; Johnson, K. M.; Miyazaki, S.

    2011-12-01

    Geodetic estimates of strain accumulation compared to the rate of past moment release provide important input to earthquake hazard forecasts. Prior to the March 2011 Tohoku earthquake a number of studies investigated plate coupling along the Japan Trench in NE Japan using GEONET GPS data. Most of these assumed an elastic back-slip framework, and regularized the underdetermined inverse problem by minimizing some norm of the back-slip rate. All studies apparently smoothed to zero coupling at the trench and therefore infer the highest coupling just offshore. In contrast, we estimate rigorous bounds on the maximum and minimum permissible rates of moment deficit (MDR) accumulation, not a ``favored'' model according to some ad hoc regularization, using methods of Johnson et al [1994] and Murray and Segall [2002]. Given a domain of interest (the Tohoku rupture segment) and Green's functions G relating slip to data, we solve the following optimization problem for back-slip rate m: {minimize}\\ || G m - d ||22 \\ {subject to} \\ A m = M0 \\ \\ {and} \\ \\ 0 ≤ mi ≤ vplate, where A = [1,1, ... 1], such that A m yields the (normalized) moment-rate. on the model domain. Preliminary results find that || G m - d ||22 exhibits a broad minimum over a factor of 2 in MDR. For the minimum MDR the locked zone is just offshore, while the plate-boundary near the trench slips at the plate rate. At the maximum MDR the locked zone is much larger, including the entire fault near the trench. This clearly demonstrates that the shallow fault is completely in the null-space for onshore data, and that there is at least a factor of two uncertainty in MDR. We will present results employing a bootstrap procedure that is independent of an assumed error distribution in the GPS data. We also extend the method to include viscoelastic earthquake cycle effects, including time-dependence due both to past earthquakes and steady backslip. In these models, fault locking near the trench induces flow which

  4. Synchrotron FTIR shows evidence of DNA damage and lipid accumulation in prostate adenocarcinoma PC-3 cells following proton irradiation

    NASA Astrophysics Data System (ADS)

    Lipiec, Ewelina; Bambery, Keith R.; Heraud, Phil; Hirschmugl, Carol; Lekki, Janusz; Kwiatek, Wojciech M.; Tobin, Mark J.; Vogel, Christian; Whelan, Donna; Wood, Bayden R.

    2014-09-01

    Synchrotron Radiation Fourier Transform Infrared (SR-FTIR) spectra of single human prostate adenocarcinoma PC-3 cells, irradiated with a defined number of 2 MeV protons generated by a proton microbeam along with non-irradiated control cells, were analysed using multivariate methods. A number of different Principal Component Analysis (PCA) models were tested and the spectral ranges associated with nucleic acids, proteins and lipids were analysed separately. The results show a dose dependent shift of the Osbnd Psbnd O asymmetric stretching mode from 1234 cm-1 to 1237 cm-1, consistent with local disorder in the B-DNA conformation along with a change in intensity of the Osbnd Psbnd O symmetric stretching band at 1083 cm-1 indicative of chromatin fragmentation - the natural consequence of a high number of DNA Double Strand Breaks (DSBs). 2D mapping of characteristic functional groups at the diffraction limit shows evidence of lipid deposition and chromatin condensation in cells exposed to protons indicative of cell apoptosis following irradiation. These studies lay the foundation for understanding the macromolecular changes that occur to cells in response to radiation therapy, which has important implications in the treatment of tumours.

  5. The rate of spontaneous epistaxis is not linked to the lunar cycle but shows seasonal variations.

    PubMed

    Duvdevani, Shay Izhak; Migirov, Lela; Wolf, Michael; Yakirevitch, Arkadi

    2014-08-01

    Since 50-60% of the human body consists of water, the physiology of blood circulation might be affected by a full moon differently than during other days of the month. This study analyzed a potential association among lunar phases, seasonal variations, and the rate of spontaneous epistaxis. Consecutive admissions solely for spontaneous epistaxis to an otolaryngology emergency room of a single medical center during 1 year were evaluated. The applied tests failed to show changes of admissions during different lunar phases. According to multiple comparisons, admissions were significantly less frequent during the summer months, similar to findings from other countries of the northern hemisphere with varying climates, suggesting an influence of circannual rhythms rather than of environmental conditions.

  6. A molecular assessment of phylogenetic relationships and lineage accumulation rates within the family Salamandridae (Amphibia, Caudata).

    PubMed

    Weisrock, David W; Papenfuss, Theodore J; Macey, J Robert; Litvinchuk, Spartak N; Polymeni, Rosa; Ugurtas, Ismail H; Zhao, Ermi; Jowkar, Houman; Larson, Allan

    2006-11-01

    We examine phylogenetic relationships among salamanders of the family Salamandridae using approximately 2700 bases of new mtDNA sequence data (the tRNALeu, ND1, tRNAIle, tRNAGln, tRNAMet, ND2, tRNATrp, tRNAAla, tRNAAsn, tRNACys, tRNATyr, and COI genes and the origin for light-strand replication) collected from 96 individuals representing 61 of the 66 recognized salamandrid species and outgroups. Phylogenetic analyses using maximum parsimony and Bayesian analysis are performed on the new data alone and combined with previously reported sequences from other parts of the mitochondrial genome. The basal phylogenetic split is a polytomy of lineages ancestral to (1) the Italian newt Salamandrina terdigitata, (2) a strongly supported clade comprising the "true" salamanders (genera Chioglossa, Mertensiella, Lyciasalamandra, and Salamandra), and (3) a strongly supported clade comprising all newts except S. terdigitata. Strongly supported clades within the true salamanders include monophyly of each genus and grouping Chioglossa and Mertensiella as the sister taxon to a clade comprising Lyciasalamandra and Salamandra. Among newts, genera Echinotriton, Pleurodeles, and Tylototriton form a strongly supported clade whose sister taxon comprises the genera Calotriton, Cynops, Euproctus, Neurergus, Notophthalmus, Pachytriton, Paramesotriton, Taricha, and Triturus. Our results strongly support monophyly of all polytypic newt genera except Paramesotriton and Triturus, which appear paraphyletic, and Calotriton, for which only one of the two species is sampled. Other well-supported clades within newts include (1) Asian genera Cynops, Pachytriton, and Paramesotriton, (2) North American genera Notophthalmus and Taricha, (3) the Triturus vulgaris species group, and (4) the Triturus cristatus species group; some additional groupings appear strong in Bayesian but not parsimony analyses. Rates of lineage accumulation through time are evaluated using this nearly comprehensive sampling of

  7. Recent peat accumulation rates in minerotrophic peatlands of the Bay James region, Eastern Canada, inferred by 210Pb and 137Cs radiometric techniques.

    PubMed

    Ali, Adam A; Ghaleb, Bassam; Garneau, Michelle; Asnong, Hans; Loisel, Julie

    2008-10-01

    (210)Pb and (137)Cs dating techniques are used to characterise recent peat accumulation rates of two minerotrophic peatlands located in the La Grande Rivière hydrological watershed, in the James Bay region (Canada). Several cores were collected during the summer 2005 in different parts of the two selected peatlands. These minerotrophic patterned peatlands are presently affected by erosion processes, expressed by progressive mechanical destruction of their pools borders. This erosion process is related to a water table rise induced by a regional increase of humidity since the last century. The main objective of the present paper is to (1) evaluate if (210)Pb and (137)Cs dating techniques can be applied to build accurate chronologies in these environments and (2) detect changes in the peat accumulation rates in regard to this amplification of humidity. In both sites, unsupported (210)Pb shows an exponential decreasing according to the depth. Chronologies inferred from (210)Pb allow to reconstruct peat accumulation rates since ca. 1855 AD. The (137)Cs data displayed evident mobility and diffusion, preventing the establishment of any sustained chronology based on these measurements. In the two sites, peat accumulation rates inferred from (210)Pb chronologies fluctuate between 0.005 and 0.038 g cm(-2) yr(-1). As a result, the rise of the water table during the last decade has not yet affected peat accumulation rates.

  8. High-throughput oncogene mutation profiling shows demographic differences in BRAF mutation rates among melanoma patients.

    PubMed

    van den Hurk, Karin; Balint, Balazs; Toomey, Sinead; O'Leary, Patrick C; Unwin, Louise; Sheahan, Kieran; McDermott, Enda W; Murphy, Ian; van den Oord, Joost J; Rafferty, Mairin; FitzGerald, Dara M; Moran, Julie; Cummins, Robert; MacEneaney, Owen; Kay, Elaine W; O'Brien, Cathal P; Finn, Stephen P; Heffron, Cynthia C B B; Murphy, Michelle; Yela, Ruben; Power, Derek G; Regan, Padraic J; McDermott, Clodagh M; O'Keeffe, Allan; Orosz, Zsolt; Donnellan, Paul P; Crown, John P; Hennessy, Bryan T; Gallagher, William M

    2015-06-01

    Because of advances in targeted therapies, the clinical evaluation of cutaneous melanoma is increasingly based on a combination of traditional histopathology and molecular pathology. Therefore, it is necessary to expand our knowledge of the molecular events that accompany the development and progression of melanoma to optimize clinical management. The central objective of this study was to increase our knowledge of the mutational events that complement melanoma progression. High-throughput genotyping was adapted to query 159 known single nucleotide mutations in 33 cancer-related genes across two melanoma cohorts from Ireland (n=94) and Belgium (n=60). Results were correlated with various clinicopathological characteristics. A total of 23 mutations in 12 genes were identified, that is--BRAF, NRAS, MET, PHLPP2, PIK3R1, IDH1, KIT, STK11, CTNNB1, JAK2, ALK, and GNAS. Unexpectedly, we discovered significant differences in BRAF, MET, and PIK3R1 mutations between the cohorts. That is, cases from Ireland showed significantly lower (P<0.001) BRAF(V600E) mutation rates (19%) compared with the mutation frequency observed in Belgian patients (43%). Moreover, MET mutations were detected in 12% of Irish cases, whereas none of the Belgian patients harbored these mutations, and Irish patients significantly more often (P=0.027) had PIK3R1-mutant (33%) melanoma versus 17% of Belgian cases. The low incidence of BRAF(V600E)(-) mutant melanoma among Irish patients was confirmed in five independent Irish cohorts, and in total, only 165 of 689 (24%) Irish cases carried mutant BRAF(V600E). Together, our data show that melanoma-driving mutations vary by demographic area, which has important implications for the clinical management of this disease.

  9. Variations in heavy metal accumulation, growth and yield of rice plants grown at different sewage sludge amendment rates.

    PubMed

    Singh, R P; Agrawal, M

    2010-05-01

    Use of sewage sludge in agriculture is an alternative disposal technique for this waste. The present field study was conducted to assess the suitability of sewage sludge amendment in soil for rice (Oryza sativa L. cv. Pusa sugandha 3) by evaluating the heavy metal accumulation, growth, biomass and yield responses of plants grown at 0, 3, 4.5, 6, 9, 12 kgm(-2) sewage sludge amendment (SSA) rate. Sewage sludge amendment modified the physico-chemical properties of soil, thus increasing the availability of heavy metals in soil and consequently with higher accumulation in plant parts. Root length decreased, whereas shoot length, number of leaves, leaf area and total biomass increased significantly when grown under various SSA rates. Yield of rice increased by 60%, 111%, 125%, 134% and 137% at 3, 4.5, 6, 9 and 12 kgm(-2) SSA, respectively, as compared to those grown in unamended soil. Sewage sludge amendment rates above 4.5 kgm(-2) though increased the yield of rice, but caused risk of food chain contamination as concentrations of Ni and Cd in rice grains were found to be above the Indian safe limits (1.5 mgkg(-1)) of human consumption above 4.5 kgm(-2) SSA and of Pb (2.5 mgkg(-1)) above 6 kgm(-2) SSA. Since aboveground parts of the rice also showed higher concentration than the permissible levels of Ni, Cd and Pb at 4.5 kgm(-2) SSA rate, it cannot be used as fodder. The rice husk may be used as bioresource for energy production. Efforts should be made to treat the effluents from small scale industries before discharge into the sewerage system.

  10. Synchrotron-based Infrared and X-ray Imaging Shows Focalized Accumulation of Cu and Zn Co-localized With Beta-amyloid Deposits in Alzheimer's Disease

    SciTech Connect

    Miller,L.; Wang, Q.; Telivala, T.; Smith, R.; Lanzirotti, A.; Miklossy, J.

    2006-01-01

    Alzheimer's disease (AD) is characterized by the misfolding and plaque-like accumulation of a naturally occurring peptide in the brain called amyloid beta (Abeta). Recently, this process has been associated with the binding of metal ions such as iron (Fe), copper (Cu), and zinc (Zn). It is thought that metal dyshomeostasis is involved in protein misfolding and may lead to oxidative stress and neuronal damage. However, the exact role of the misfolded proteins and metal ions in the degenerative process of AD is not yet clear. In this study, we used synchrotron Fourier transform infrared micro-spectroscopy (FTIRM) to image the in situ secondary structure of the amyloid plaques in brain tissue of AD patients. These results were spatially correlated with metal ion accumulation in the same tissue sample using synchrotron X-ray fluorescence (SXRF) microprobe. For both techniques, a spatial resolution of 5-10 microm was achieved. FTIRM results showed that the amyloid plaques have elevated beta-sheet content, as demonstrated by a strong amide I absorbance at 1625cm(-1). Using SXRF microprobe, we find that AD tissue also contains 'hot spots' of accumulated metal ions, specifically Cu and Zn, with a strong spatial correlation between these two ions. The 'hot spots' of accumulated Zn and Cu were co-localized with beta-amyloid plaques. Thus for the first time, a strong spatial correlation has been observed between elevated beta-sheet content in Abeta plaques and accumulated Cu and Zn ions, emphasizing an association of metal ions with amyloid formation in AD.

  11. Tracing nitrogen accumulation in decaying wood and examining its impact on wood decomposition rate

    NASA Astrophysics Data System (ADS)

    Rinne, Katja T.; Rajala, Tiina; Peltoniemi, Krista; Chen, Janet; Smolander, Aino; Mäkipää, Raisa

    2016-04-01

    Decomposition of dead wood, which is controlled primarily by fungi is important for ecosystem carbon cycle and has potentially a significant role in nitrogen fixation via diazotrophs. Nitrogen content has been found to increase with advancing wood decay in several studies; however, the importance of this increase to decay rate and the sources of external nitrogen remain unclear. Improved knowledge of the temporal dynamics of wood decomposition rate and nitrogen accumulation in wood as well as the drivers of the two processes would be important for carbon and nitrogen models dealing with ecosystem responses to climate change. To tackle these questions we applied several analytical methods on Norway spruce logs from Lapinjärvi, Finland. We incubated wood samples (density classes from I to V, n=49) in different temperatures (from 8.5oC to 41oC, n=7). After a common seven day pre-incubation period at 14.5oC, the bottles were incubated six days in their designated temperature prior to CO2 flux measurements with GC to determine the decomposition rate. N2 fixation was measured with acetylene reduction assay after further 48 hour incubation. In addition, fungal DNA, (MiSeq Illumina) δ15N and N% composition of wood for samples incubated at 14.5oC were determined. Radiocarbon method was applied to obtain age distribution for the density classes. The asymbiotic N2 fixation rate was clearly dependent on the stage of wood decay and increased from stage I to stage IV but was substantially reduced in stage V. CO2 production was highest in the intermediate decay stage (classes II-IV). Both N2 fixation and CO2 production were highly temperature sensitive having optima in temperature 25oC and 31oC, respectively. We calculated the variation of annual levels of respiration and N2 fixation per hectare for the study site, and used the latter data together with the 14C results to determine the amount of N2 accumulated in wood in time. The proportion of total nitrogen in wood

  12. Impacts of timber harvesting on historic sediment accumulation rates in the Coos Bay estuary, Oregon

    NASA Astrophysics Data System (ADS)

    Mathabane, N.; Roering, J. J.

    2014-12-01

    The expansion and development of human infrastructure along the coastline of the Pacific Northwest has profound consequences for the habitability and general ecological health of coastal ecosystems. Coos County, one of the most economically critical regions of the Oregon Coast, experienced vigorous timber harvest activity in the aftermath of WWII that declined in the last several decades. This period of extractive land use may have drastically altered the sediment supply in the major catchments of the Coos and Millicoma Rivers and lead to variations in sediment flux into the Coos Bay estuary. Accurate sediment flux histories are critical data for deciphering the relative importance of climate and land use factors such as logging and road construction on sediment production. Reduction of root reinforcement following timber harvest increases the likelihood of shallow landsliding and debris flows. In addition, forest roads increase sediment production due to overland flow and entrainment of fine sediments on hydrologically connected roads. Although these processes have been documented in small watersheds, their compounded effect on estuaries and coastal settings has not been well documented. We use Pb-210 activities derived from sediment cores taken at various locations in the Coos Bay estuary to establish temporal variations in sediment accumulation rates (SARs). Our cores will also be analyzed to assess dissolved oxygen and other proxies for ecosystem functioning. By correlating these SARs with quantitative metrics for timber extraction rate such as board feet per year and qualitative evaluations from historical photos, we propose to document the cumulative effect of historic forest practices. The temporal resolution provided by this technique should allow us to link changes in estuarine sedimentation to changes in land use as well as climatic triggers such as storms. The conclusions of this study will add valuable information regarding the ultimate impact of

  13. Predicting the visitation of carcasses by carrion-related insects under different rates of degree-day accumulation.

    PubMed

    Michaud, Jean-Philippe; Moreau, Gaétan

    2009-03-10

    Common assumptions in forensic entomology are that insects visit and colonize carcasses following a predictable sequence, and that this succession varies among seasons. However, currently available evidence for insect succession on decomposing bodies is essentially descriptive and, to our knowledge, the fine-scale predictability of insect succession with respect to seasons has never been confirmed statistically. In this study, we test these assumptions through the sampling of carrion-related insects attracted to pig carcasses. The study was carried out during the summer and fall of 2006 in rural fields of New Brunswick, Canada. Of the five species of carrion-related insects with high enough occurrence on carcasses to allow modelling, three showed predictable occurrence with respect to degree-day accumulation and seasonal effects. This demonstrates that the occurrence probability of some carrion-related insects on carcasses can be estimated from meteorological records even across seasons with different rates of degree-day accumulation. As opposed to the prevailing idea that adult insects are not reliable for post-mortem interval estimation, the adults of some species exhibited a specific pattern of visitation that could be determined and used in forensic investigations. It is stressed, however, that the statistical predictability of species occurrence must be assessed before any species is considered as a post-mortem interval indicator.

  14. Marine debris accumulation in the Northwestern Hawaiian Islands: an examination of rates and processes.

    PubMed

    Dameron, Oliver J; Parke, Michael; Albins, Mark A; Brainard, Russell

    2007-04-01

    Large amounts of derelict fishing gear accumulate and cause damage to shallow coral reefs of the Northwestern Hawaiian Islands (NWHI). To facilitate maintenance of reefs cleaned during 1996-2005 removal efforts, we identify likely high-density debris areas by assessing reef characteristics (depth, benthic habitat type, and energy regime) that influence sub-regional debris accumulation. Previously cleaned backreef and lagoonal reefs at two NWHI locations were resurveyed for accumulated debris using two survey methods. Accumulated debris densities and weights were found to be greater in lagoonal reef areas. Sample weight-based debris densities are extrapolated to similar habitats throughout the NWHI using a spatial 'net habitat' dataset created by generalizing IKONOS satellite derivatives for depth and habitat classification. Prediction accuracy for this dataset is tested using historical debris point data. Annual NWHI debris accumulation is estimated to be 52.0 metric tonnes. For planning purposes, individual NWHI atolls/reefs are allotted a proportion of this total.

  15. The wildgeographer avatar shows how to measure soil erosion rates by means of a rainfall simulator

    NASA Astrophysics Data System (ADS)

    Cerdà, Artemi; González Pelayo, Óscar; Pereira, Paulo; Novara, Agata; Iserloh, Thomas; Prosdocimi, Massimo

    2015-04-01

    This contribution to the immersed worlds wish to develop the avatar that will teach the students and other scientists how to develop measurements of soil erosion, surface runoff and wetting fronts by means of simulated rainfall experiments. Rainfall simulation is a well established and knows methodology to measure the soil erosion rates and soil hydrology under controlled conditions (Cerdà 1998a; Cerdà, 1998b; Cerdà and Jurgensen, 2011; Dunkerley, 2012; Iserloh et al., 2012; Iserloh et al., 2013; Ziadat and Taimeh, 2013; Butzen et al., 2014). However, is a method that requires a long training and expertise to avoid mismanagement and mistaken. To use and avatar can help in the teaching of the technique and the dissemination of the findings. This contribution will show to other avatars how to develop an experiment with simulated rainfall and will help to take the right decision in the design of the experiments. Following the main parts of the experiments and measurements the Wildgeographer avatar must develop: 1. Determine the objectives and decide which rainfall intensity and distribution, and which plot size to be used. Choose between a laboratory or a field rainfall simulation. 2. Design of the rainfall simulator to achieve the objectives: type of rainfall simulator (sprayer or drop former) and calibrate. 3. The experiments are carried out. 4. The results are show. Acknowledgements To the "Ministerio de Economía and Competitividad" of Spanish Government for finance the POSTFIRE project (CGL2013- 47862-C2-1-R). The research projects GL2008-02879/BTE, LEDDRA 243857 and PREVENTING AND REMEDIATING DEGRADATION OF SOILS IN EUROPE THROUGH LAND CARE (RECARE)FP7-ENV-2013- supported this research. References Butzen, V., Seeger, M., Wirtz, S., Huemann, M., Mueller, C., Casper, M., Ries, J. B. 2014. Quantification of Hortonian overland flow generation and soil erosion in a Central European low mountain range using rainfall experiments. Catena, 113, 202-212. Cerdà, A

  16. Speed versus endurance tradeoff in plants: Leaves with higher photosynthetic rates show stronger seasonal declines.

    PubMed

    Zhang, Yong-Jiang; Sack, Lawren; Cao, Kun-Fang; Wei, Xue-Mei; Li, Nan

    2017-02-10

    We tested for a tradeoff across species between plant maximum photosynthetic rate and the ability to maintain photosynthesis under adverse conditions in the unfavorable season. Such a trade-off would be consistent with the observed trade-off between maximum speed and endurance in athletes and some animals that has been explained by cost-benefit theory. This trend would have importance for the general understanding of leaf design, and would simplify models of annual leaf carbon relations. We tested for such a trade-off using a database analysis across vascular plants and using an experimental approach for 29 cycad species, representing an ancient plant lineage with diversified evergreen leaves. In both tests, a higher photosynthetic rate per mass or per area in the favorable season was associated with a stronger absolute or percent decline in the unfavorable season. We resolved a possible mechanism based on biomechanics and nitrogen allocation; cycads with high leaf toughness (leaf mass per area) and higher investment in leaf construction than in physiological function (C/N ratio) tended to have lower warm season photosynthesis but less depression in the cool season. We propose that this trade-off, consistent with cost-benefit theory, represents a significant physio-phenological constraint on the diversity and seasonal dynamics of photosynthetic rate.

  17. Speed versus endurance tradeoff in plants: Leaves with higher photosynthetic rates show stronger seasonal declines

    PubMed Central

    Zhang, Yong-Jiang; Sack, Lawren; Cao, Kun-Fang; Wei, Xue-Mei; Li, Nan

    2017-01-01

    We tested for a tradeoff across species between plant maximum photosynthetic rate and the ability to maintain photosynthesis under adverse conditions in the unfavorable season. Such a trade-off would be consistent with the observed trade-off between maximum speed and endurance in athletes and some animals that has been explained by cost-benefit theory. This trend would have importance for the general understanding of leaf design, and would simplify models of annual leaf carbon relations. We tested for such a trade-off using a database analysis across vascular plants and using an experimental approach for 29 cycad species, representing an ancient plant lineage with diversified evergreen leaves. In both tests, a higher photosynthetic rate per mass or per area in the favorable season was associated with a stronger absolute or percent decline in the unfavorable season. We resolved a possible mechanism based on biomechanics and nitrogen allocation; cycads with high leaf toughness (leaf mass per area) and higher investment in leaf construction than in physiological function (C/N ratio) tended to have lower warm season photosynthesis but less depression in the cool season. We propose that this trade-off, consistent with cost-benefit theory, represents a significant physio-phenological constraint on the diversity and seasonal dynamics of photosynthetic rate. PMID:28186201

  18. River sediment flux and shelf sediment accumulation rates on the Pacific Northwest margin

    NASA Astrophysics Data System (ADS)

    Wheatcroft, R. A.; Sommerfield, C. K.

    2005-02-01

    To test the generality of insight obtained from recent STRATAFORM studies of northern California's Eel margin, river sediment sources and continental shelf sinks were examined on the Pacific Northwest margin from 38° to 44.5°N. River discharge and sediment concentration data acquired by the US Geological Survey were used to update long-term annual suspended-sediment loads for 17 rivers that range in basin area from 635 to ˜22,000 km 2. Resulting annual load estimates vary over 3 orders of magnitude (0.065-18×10 9 kg/yr), with major suspended-sediment fluxes supplied by, in decreasing order, the Eel, Klamath/Trinity, Mad, Rogue, Umpqua and Russian rivers. Down-core profiles of excess 210Pb and 137Cs were used to estimate sediment accumulation rates (SARs) at prescribed depths (70 and 110 m) and distances (0-40-km north and south along-shelf) from each of the major rivers. SARs were found to vary much less than the river flux estimates, and are mostly in the range of 1.5 to 6 mm/yr. Most significantly, shelf SARs on the other Pacific Northwest margins are only slightly less than those observed on the Eel shelf, implying that much higher proportions of riverine sediment are retained on those shelves. Likely reasons that the Eel dispersal system exhibits greater off-shelf transport are (1) the narrower and steeper shelf geometry, and (2) the existence of a newly documented cross-isobath sediment transport mechanism that involves wave-modulated fluid mud flows. Testing whether the fluid mud flows are a consequence of the Eel River basin's high sediment yield, and are thus unique to the Eel, or are caused by intense wave energy during discharge events, and hence are operative on many other margins, awaits future bottom-boundary layer measurements.

  19. 210Pb mass accumulation rates in the depositional area of the Magra River (Mediterranean Sea, Italy)

    NASA Astrophysics Data System (ADS)

    Delbono, I.; Barsanti, M.; Schirone, A.; Conte, F.; Delfanti, R.

    2016-08-01

    Nine sediment cores were collected between 2009 and 2012 in the inner continental shelf (Mediterranean Sea, Italy) mainly influenced by the Magra River, at water depths ranging from 11 to 64 m. Mass Accumulation Rates (MARs) were calculated through 210Pb analysed by Gamma spectrometry. Three different dating models (single and two-layer CF-CS, CRS) were applied to clay normalised 210Pbxs profiles and 137Cs was used to validate the 210Pb geochronology. The maximum MAR values (>2 g cm-2 yr-1) were found in the region adjacent to the Magra River mouth and outside the Gulf of La Spezia (0.9±0.1 g cm-2 yr-1 at St. 3-C6 and 4-C4). Results from 137Cs/210Pbxs ratios calculated in Surface Mixed Layers (SMLs) evidenced the coastal boundaries of the Magra River depositional area, which is very limited towards south. Differently, in the north-west sector, fine sediments are generally driven by the Ligurian Current and move towards north-west: at the deepest and most distant station from the River mouth, the MAR value is the lowest one in the study area. Few major Magra River floods occurred during the sediment core sampling period. By using the short-lived radioisotope 7Be as a tracer of river floods, a clear 7Be signature of 2009 flood is present at St. 1-SA1C. Finally, by analyzing the clay normalised 210Pbxs profiles, a decrease of its activity dating the years 1999 and 2000 is observed in four cores, corresponding to two major Magra River floods occurring in those years.

  20. Geographic variability in organic carbon stock and accumulation rate in sediments of East and Southeast Asian seagrass meadows

    NASA Astrophysics Data System (ADS)

    Miyajima, Toshihiro; Hori, Masakazu; Hamaguchi, Masami; Shimabukuro, Hiromori; Adachi, Hiroshi; Yamano, Hiroya; Nakaoka, Masahiro

    2015-04-01

    Organic carbon (OC) stored in the sediments of seagrass meadows has been considered a globally significant OC reservoir. However, the sparsity and regional bias of studies on long-term OC accumulation in coastal sediments have limited reliable estimation of the capacity of seagrass meadows as a global OC sink. We evaluated the amount and accumulation rate of OC in sediment of seagrass meadows and adjacent areas in East and Southeast Asia. In temperate sites, the average OC concentration in the top 30 cm of sediment was higher in seagrass meadows (780-1080 mmol g-1) than in sediments without seagrass cover (52-430 mmol g-1). The average OC in the top 30 cm of subtropical and tropical seagrass meadow sediments ranged from 140 to 440 mmol g-1. Carbon isotope mass balancing suggested that the contribution of seagrass-derived carbon to OC stored in sediments was often relatively minor (temperate: 10-40%; subtropical: 35-82%; tropical: 4-34%) and correlated to the habitat type, being particularly low in estuarine habitats. Stock of OC in the top meter of sediment of all the studied meadows ranged from 38 to 120 Mg ha-1. The sediment accumulation rates were estimated by radiocarbon dating of six selected cores (0.32-1.34 mm yr-1). The long-term OC accumulation rates calculated from the sediment accumulation rate and the top 30 cm average OC concentration for the seagrass meadows (24-101 kg ha-1 yr-1) were considerably lower than the OC accumulation rates previously reported for Mediterranean Posidonia oceanica meadows (580 kg ha-1 yr-1 on average). Current estimates for the global carbon sink capacity of seagrass meadows, which rely largely on Mediterranean studies, may be considerable overestimations.

  1. PG-13 Movies Show More Gun Violence Than R-Rated Films

    MedlinePlus

    ... negative effects, including desensitization, a distorted view of reality and aggressive behavior," he said. "[And] the trends ... do show that the lines demarcating fantasy and reality are less clear for younger viewers, which makes ...

  2. Long-term phenological trends, species accumulation rates, aphid traits and climate: five decades of change in migrating aphids.

    PubMed

    Bell, James R; Alderson, Lynda; Izera, Daniela; Kruger, Tracey; Parker, Sue; Pickup, Jon; Shortall, Chris R; Taylor, Mark S; Verrier, Paul; Harrington, Richard

    2015-01-01

    Aphids represent a significant challenge to food production. The Rothamsted Insect Survey (RIS) runs a network of 12·2-m suction-traps throughout the year to collect migrating aphids. In 2014, the RIS celebrated its 50th anniversary. This paper marks that achievement with an extensive spatiotemporal analysis and the provision of the first British annotated checklist of aphids since 1964. Our main aim was to elucidate mechanisms that advance aphid phenology under climate change and explain these using life-history traits. We then highlight emerging pests using accumulation patterns. Linear and nonlinear mixed-effect models estimated the average rate of change per annum and effects of climate on annual counts, first and last flights and length of flight season since 1965. Two climate drivers were used: the accumulated day degrees above 16 °C (ADD16) indicated the potential for migration during the aphid season; the North Atlantic Oscillation (NAO) signalled the severity of the winter before migration took place. All 55 species studied had earlier first flight trends at rate of β = -0·611 ± SE 0·015 days year(-1). Of these species, 49% had earlier last flights, but the average species effect appeared relatively stationary (β = -0·010 ± SE 0·022 days year(-1)). Most species (85%) showed increasing duration of their flight season (β = 0·336 ± SE 0·026 days year(-1)), even though only 54% increased their log annual count (β = 0·002 ± SE <0·001 year(-1)). The ADD16 and NAO were shown to drive patterns in aphid phenology in a spatiotemporal context. Early in the year when the first aphids were migrating, the effect of the winter NAO was highly significant. Further into the year, ADD16 was a strong predictor. Latitude had a near linear effect on first flights, whereas longitude produced a generally less-clear effect on all responses. Aphids that are anholocyclic (permanently parthenogenetic) or are monoecious (non

  3. Carbon accumulation rates recorded in the last 150years in tropical high mountain peatlands of the Atlantic Rainforest, SE - Brazil.

    PubMed

    Lourençato, Lúcio F; Caldeira, Pedro P; Bernardes, Marcelo C; Buch, Andressa C; Teixeira, Daniel C; Silva-Filho, Emmanoel V

    2017-02-01

    Peatlands are environmental matrices that store large amounts of organic carbon (TOC) and work as records of environmental changes. Recent record of organic carbon accumulated were assessed in two Forest National Parks, Itatiaia and Serra dos Órgãos in the Southeastern of Brazil. Based on organic and inorganic characterization, the cores from peatlands presented a predominance of organic material in an advanced stage of decomposition and those soils were classified as typical Haplosaprists Histosols. The combination of favorable topographic and climatic conditions led to rapid C accumulation across coastal mountain in the tropical peatlands studied, presenting an average accumulation rate of C, in the last century, of 194gCm(-2)yr(-1) about 7 higher times than the rate found in boreal and subarctic peatlands, those higher values may be related to changes in the hydrological cycle occurred since 1950s.

  4. Minos-insertion mutant of the Drosophila GBA gene homologue showed abnormal phenotypes of climbing ability, sleep and life span with accumulation of hydroxy-glucocerebroside.

    PubMed

    Kawasaki, Haruhisa; Suzuki, Takahiro; Ito, Kumpei; Takahara, Tsubasa; Goto-Inoue, Naoko; Setou, Mitsutoshi; Sakata, Kazuki; Ishida, Norio

    2017-03-07

    Gaucher's disease in humans is considered a deficiency of glucocerebrosidase (GlcCerase) that result in the accumulation of its substrate, glucocerebroside (GlcCer). Although mouse models of Gaucher's disease have been reported from several laboratories, these models are limited due to the perinatal lethality of GlcCerase gene. Here, we examined phenotypes of Drosophila melanogaster homologues genes of the human Gaucher's disease gene by using Minos insertion. One of two Minos insertion mutants to unknown function gene (CG31414) accumulates the hydroxy-GlcCer in whole body of Drosophila melanogaster. This mutant showed abnormal phenotypes of climbing ability and sleep, and short lifespan. These abnormal phenotypes are very similar to that of Gaucher's disease in human. In contrast, another Minos insertion mutant (CG31148) and its RNAi line did not show such severe phenotype as observed in CG31414 gene mutation. The data suggests that Drosophila CG31414 gene mutation might be useful for unraveling the molecular mechanism of Gaucher's disease.

  5. A model SN2 reaction ‘on water’ does not show rate enhancement

    NASA Astrophysics Data System (ADS)

    Nelson, Katherine V.; Benjamin, Ilan

    2011-05-01

    Molecular dynamics calculations of the benchmark nucleophilic substitution reaction (SN2) Cl- + CH3Cl are carried out at the water liquid/vapor interface. The reaction free energy profile and the activation free energy are determined as a function of the reactants' location normal to the surface. The activation free energy remains almost constant relative to that in bulk water, despite the fact that the barrier is expected to significantly decrease as the reaction is carried out near the vapor phase. We show that this is due to the combined effects of a clustering of water molecules around the nucleophile and a relatively weak hydration of the transition state.

  6. Retrospective analysis showing the water method increased adenoma detection rate — a hypothesis generating observation

    PubMed Central

    Leung, Joseph W; Do, Lynne D; Siao-Salera, Rodelei M; Ngo, Catherine; Parikh, Dhavan A; Mann, Surinder K

    2011-01-01

    Background A water method developed to attenuate discomfort during colonoscopy enhanced cecal intubation in unsedated patients. Serendipitously a numerically increased adenoma detection rate (ADR) was noted. Objective To explore databases of sedated patients examined by the air and water methods to identify hypothesis-generating findings. Design: Retrospective analysis. Setting: VA endoscopy center. Patients: creening colonoscopy. Interventions: From 1/2000–6/2006 the air method was used - judicious air insufflation to permit visualization of the lumen to aid colonoscope insertion and water spray for washing mucosal surfaces. From 6/2006–11/2009 the water method was adopted - warm water infusion in lieu of air insufflation and suction removal of residual air to aid colonoscope insertion. During colonoscope withdrawal adequate air was insufflated to distend the colonic lumen for inspection, biopsy and polypectomy in a similar fashion in both periods. Main outcome measurements: ADR. Results The air (n=683) vs. water (n=495) method comparisons revealed significant differences in overall ADR 26.8% (183 of 683) vs. 34.9% (173 of 495) and ADR of adenomas >9 mm, 7.2% vs. 13.7%, respectively (both P<0.05, Fisher's exact test). Limitations: Non-randomized data susceptible to bias by unmeasured parameters unrelated to the methods. Conclusion Confirmation of the serendipitous observation of an impact of the water method on ADR provides impetus to call for randomized controlled trials to test hypotheses related to the water method as an approach to improving adenoma detection. Because of recent concerns over missed lesions during colonoscopy, the provocative hypothesis-generating observations warrant presentation. PMID:21686105

  7. Recent rates of carbon accumulation in montane fens ofYosemite National Park, California, U.S.A.

    USGS Publications Warehouse

    Drexler, Judith; Fuller, Christopher C.; Orlando, James L.; Moore, Peggy E.

    2016-01-01

    Little is known about recent rates of carbon storage in montane peatlands, particularly in the western United States. Here we report on recent rates of carbon accumulation (past 50 to 100 years) in montane groundwater-fed peatlands (fens) of Yosemite National Park in central California, U.S.A. Peat cores were collected at three sites ranging in elevation from 2070 to 2500 m. Core sections were analyzed for bulk density, % organic carbon, and 210Pb activities for dating purposes. Organic carbon densities ranged from 0.026 to 0.065 g C cm-3. Mean vertical accretion rates estimated using210Pb over the 50-year period from ∼1960 to 2011 and the 100-year period from ∼1910 to 2011 were 0.28 (standard deviation = ±0.09) and 0.18 (±-0.04) cm yr-1, respectively. Mean carbon accumulation rates over the 50- and 100-year periods were 95.4 (±25.4) and 74.7 (±17.2) g C m-2 yr-1, respectively. Such rates are similar to recent rates of carbon accumulation in rich fens in western Canada, but more studies are needed to definitively establish both the similarities and differences in peat formation between boreal and temperate montane fens.

  8. Variations in the accumulation, localization and rate of metabolization of selenium in mature Zea mays plants supplied with selenite or selenate.

    PubMed

    Longchamp, Mélanie; Castrec-Rouelle, Maryse; Biron, Philippe; Bariac, Thierry

    2015-09-01

    Quantification of selenium bioavailability from foods is a key challenge following the discovery of the antioxidant role of this micronutrient in human health. This study presents the uptake, accumulation and rate of metabolization in mature Zea mays plants grown in hydroponic solution supplemented with selenate or selenite. Selenium content was lower in plants supplemented with selenate and accumulated mainly in the leaves compared with selenite-treated plants where the selenium was retained in the roots. Selenite-treated grains accumulated more selenium. Selenate was metabolized less than selenite in whole plants, but in grains selenium was present exclusively as organic selenium compounds. For humans, the bioavailability of organic selenium was evaluated at 90% compared with only 50% for inorganic forms. Our results show that the potential for selenium bioavailability is increased with selenite treatment.

  9. Inconsistencies between (14)C and short-lived radionuclides-based sediment accumulation rates: Effects of long-term remineralization.

    PubMed

    Baskaran, M; Bianchi, T S; Filley, T R

    2016-09-06

    (14)C is the most widely utilized geochronometer to investigate geological, geochemical and geophysical problems over the past 5 decades. Establishment of precise sedimentation rates is crucial for the reconstruction of paleo-climate, -ecological and - environmental studies when extrapolation of sedimentation rates is utilized for time scales beyond the dating range. However, agreement between short-term and long-term sedimentation rates in anthropogenically unperturbed sediment cores has not been shown. Here we show that the AMS (14)C-based long-term mass accumulation rate (MAR) of an organic-rich (>70%) sediment core from Mud Lake, Florida to be ∼5 times lower than the short-term MAR obtained using (239,240)Pu, (137)Cs and excess (210)Pb ((210)Pbxs). The measured sediment inventories of (210)Pbxs, (137)Cs and (239,240)Pu are comparable to the atmospheric fallout for the sampling site, indicating very little accelerated sediment erosion over the past several decades. Presence of sharp fallout peaks of (239,240)Pu indicates very little sediment mixing. The penetration depths of (137)Cs and (239,240)Pu were found to be much deeper than expected and this is attributed to their post-depositional mobility. MAR calculated using (14)C-ages in successive layers also indicated decreasing MARs with depth, and was reflective of progressive remineralization. Using first-order kinetics, the sediment remineralization rate was found to be 4.4 × 10(-4) y(-1) and propose that over the long-term, remineralization of organic-rich sediment affected the long-term MAR, but not the ratio of (14)C/(12)C. Thus, the MAR and linear sedimentation rate obtained using (14)C (and other isotope-based methods) could be erroneous, although (14)C ages may not be affected by such remineralization. Long-term remineralization rates of organic matter has a direct bearing on the biogeochemical cycling of elements in aqueous systems and mass balance of elements needs to be taken into consideration.

  10. Laboratory Determination of Molybdenum Accumulation Rates as a Measure of Hypoxic Conditions

    EPA Science Inventory

    Redox sensitive metals, such as molybdenum (Mo), are enriched in reducing sediments due to authigenic fixation in anoxic interstitial waters of sediments. This study tested whether the process of fixation and accumulation of Mo in sediments could provide a geochemical indicator o...

  11. ACCUMULATION RATE OF MICROBIAL BIOMASS AT TWO PERMEABLE REACTIVE BARRIER SITES

    EPA Science Inventory

    Accumulation of mineral precipitates and microbial biomass are key factors that impact the long-term performance of in-situ Permeable Reactive Barriers for treating contaminated groundwater. Both processes can impact remedial performance by decreasing zero-valent iron reactivity...

  12. [Estimating of decadal accumulation rates of heavy metals in surface rice soils in the Tai Lake region of China].

    PubMed

    Li, Lianqing; Pan, Genxing; Zhang, Pingjiu; Cheng, Jiemin; Zhu, Qiuhua; Qiu, Duosheng

    2002-05-01

    Estimation of decadal accumulation of some heavy metals in surface rice soils from the Tai Lake region, southern Jiangsu Province, China was made by means of calculating the monitoring data and/or analysis data of the archived soil samples. For the last decade, the estimated annual accumulation rate for Cu or Zn, Pb and Cd was 0.3-1 mg.(kg.a)-1, 0.2-1 mg.(kg.a)-1 and 0.3-3 micrograms.(kg.a)-1 respectively, the apparent pollution loading was, therefore, respectively 0.5-1 kg.(hm2.a)-1, 0.5-1.0 kg.(hm2.a)-1, 0.5-3.0 kg.(hm2.a)-1 [symbol: see text] 0.8-10 x 10(-3) kg.(hm2.a)-1. The accumulation rate for the content of available form was shown to be greater than that of total content. The non-point source pollution marked bigger contribution to the total annual loading for the Pb and Cd than the other source pollutions, while the Cd loading was prominently higher than those reported in Europe. These results may indicate that the food safety in this region may be constrained by the soil pollution of these heavy metals at high accumulation rates.

  13. Carbon and sediment accumulation in the Everglades (USA) during the past 4000 years: rates, drivers, and sources of error

    USGS Publications Warehouse

    Glaser, Paul H.; Volin, John C.; Givnish, Thomas J.; Hansen, Barbara C. S.; Stricker, Craig A.

    2012-01-01

    Tropical and sub-tropical wetlands are considered to be globally important sources for greenhouse gases but their capacity to store carbon is presumably limited by warm soil temperatures and high rates of decomposition. Unfortunately, these assumptions can be difficult to test across long timescales because the chronology, cumulative mass, and completeness of a sedimentary profile are often difficult to establish. We therefore made a detailed analysis of a core from the principal drainage outlet of the Everglades of South Florida, to assess these problems and determine the factors that could govern carbon accumulation in this large sub-tropical wetland. Accelerator mass spectroscopy dating provided direct evidence for both hard-water and open-system sources of dating errors, whereas cumulative mass varied depending upon the type of method used. Radiocarbon dates of gastropod shells, nevertheless, seemed to provide a reliable chronology for this core once the hard-water error was quantified and subtracted. Long-term accumulation rates were then calculated to be 12.1 g m-2 yr-1 for carbon, which is less than half the average rate reported for northern and tropical peatlands. Moreover, accumulation rates remained slow and relatively steady for both organic and inorganic strata, and the slow rate of sediment accretion ( 0.2 mm yr-1) tracked the correspondingly slow rise in sea level (0.35 mm yr-1 ) reported for South Florida over the past 4000 years. These results suggest that sea level and the local geologic setting may impose long-term constraints on rates of sediment and carbon accumulation in the Everglades and other wetlands.

  14. Constraining mass accumulation rates across the Cretaceous-Paleogene boundary clay layer using extraterrestrial helium-3

    NASA Astrophysics Data System (ADS)

    Giron, M.; Sepulveda, J.; Mukhopadhyay, S.; Alegret, L.; Summons, R. E.

    2012-12-01

    The extended duration of the negative δ13C excursion observed in marine carbonates spanning the Cretaceous-Paleogene (K-Pg) mass extinction event has lead to two main hypothesized post-extinction models ("Strangelove" and "Living Ocean";[1, 2]) for the status of marine primary productivity and the global carbon cycle. However, these models are largely inconsistent with recent paleontological and geochemical evidence suggesting heterogeneous changes in marine productivity and carbon export [3, 4]. While the analysis of lipid biomarkers in the cosmopolitan boundary clay layer allows us to assess changes in primary production by non-calcifying organisms in the immediate aftermath of the mass extinction [4], our poor understanding of the deposition of the clay layer precludes a more detailed reconstruction of short-term variations in marine ecosystem resilience. Here, we present data on extraterrestrial 3He derived from interplanetary dust particles used as a constant flux proxy to constrain fluctuations in mass accumulation rates (MARs) [5] and the duration of the boundary clay deposition in three classic and expanded K-Pg boundary sections: El Kef (Tunisia), Caravaca (Spain), and Kulstirenden (Denmark). Our results from different depositional environments indicate average durations for the sedimentation of the clay layer that are comparable (~10 kyr) to other localities [5], thus confirming its globally brief deposition. Early Paleogene MARs vary among locations when compared to background Late Cretaceous values and do not strictly follow carbonate content as traditionally assumed, thus suggesting variable depositional conditions at different locations. Changes in sediment MARs across the K-Pg will be used to calculate MARs of algal- and bacterial-derived biomarkers, as well as benthic foraminifera, in order to assess the timing and global nature of the recovery of marine primary production and carbon export. 1. Hsu, K.J., He, Q., Mckenzie, J.A., Weissert, H

  15. Ice shelf snow accumulation rates from the Amundsen-Bellingshausen Sea sector of West Antarctica derived from airborne radar

    NASA Astrophysics Data System (ADS)

    Medley, B.; Kurtz, N. T.; Brunt, K. M.

    2015-12-01

    The large ice shelves surrounding the Antarctic continent buttress inland ice, limiting the grounded ice-sheet flow. Many, but not all, of the thick ice shelves located along the Amundsen-Bellingshausen Seas are experiencing rapid thinning due to enhanced basal melting driven by the intrusion of warm circumpolar deep water. Determination of their mass balance provides an indicator as to the future of the shelves buttressing capability; however, measurements of surface accumulation are few, limiting the precision of the mass balance estimates. Here, we present new radar-derived measurements of snow accumulation primarily over the Getz and Abbott Ice Shelves, as well as the Dotson and Crosson, which have been the focus of several of NASA's Operation IceBridge airborne surveys between 2009 and 2014. Specifically, we use the Center for Remote Sensing of Ice Sheets (CReSIS) snow radar to map the near-surface (< 30 m) internal stratigraphy to measure snow accumulation. Due to the complexities of the local topography (e.g., ice rises and rumples) and their relative proximity to the ocean, the spatial pattern of accumulation can be equally varied. Therefore, atmospheric models might not be able to reproduce these small-scale features because of their limited spatial resolution. To evaluate whether this is the case over these narrow shelves, we will compare the radar-derived accumulation rates with those from atmospheric models.

  16. Transgenic Bt cotton driven by the green tissue-specific promoter shows strong toxicity to lepidopteran pests and lower Bt toxin accumulation in seeds.

    PubMed

    Wang, Qing; Zhu, Yi; Sun, Lin; Li, Lebin; Jin, Shuangxia; Zhang, Xianlong

    2016-02-01

    A promoter of the PNZIP (Pharbitis nil leucine zipper) gene (1.459 kb) was cloned from Pharbitis nil and fused to the GUS (β-glucuronidase) and Bacillus thuringiensis endotoxin (Cry9C) genes. Several transgenic PNZIP::GUS and PNZIP::Cry9C cotton lines were developed by Agrobacterium-mediated transformation. Strong GUS staining was detected in the green tissues of the transgenic PNZIP::GUS cotton plants. In contrast, GUS staining in the reproductive structures such as petals, anther, and immature seeds of PNZIP::GUS cotton was very faint. Two transgenic PNZIP::Cry9C lines and one transgenic cauliflower mosaic virus (CaMV) 35S::Cry9C line were selected for enzyme-linked immunosorbent assay (ELISA) and insect bioassays. Expression of the Cry9C protein in the 35S::Cry9C line maintained a high level in most tissues ranging from 24.6 to 45.5 μg g(-1) fresh weight. In green tissues such as the leaves, boll rinds, and bracts of the PNZIP::Cry9C line, the Cry9C protein accumulated up to 50.2, 39.7, and 48.3 μg g(-1) fresh weight respectively. In contrast, seeds of the PNZIP::Cry9C line (PZ1.3) accumulated only 0.26 μg g(-1) fresh weight of the Cry9C protein, which was 100 times lower than that recorded for the seeds of the CaMV 35S::Cry9C line. The insect bioassay showed that the transgenic PNZIP::Cry9C cotton plant exhibited strong resistance to both the cotton bollworm and the pink bollworm. The PNZIP promoter could effectively drive Bt toxin expression in green tissues of cotton and lower accumulated levels of the Bt protein in seeds. These features should allay public concerns about the safety of transgenic foods. We propose the future utility of PNZIP as an economical, environmentally friendly promoter in cotton biotechnology.

  17. Influences of sediment geochemistry on metal accumulation rates and toxicity in the aquatic oligochaete Tubifex tubifex.

    PubMed

    Méndez-Fernández, Leire; De Jonge, Maarten; Bervoets, Lieven

    2014-12-01

    Metal bioaccumulation and toxicity in the aquatic oligochaete Tubifex tubifex exposed to three metal-contaminated field-sediments was studied in order to assess whether sediment-geochemistry (AVS, TOC) plays a major role in influencing these parameters, and to assess if the biodynamic concept can be used to explain observed effects in T. tubifex tissue residues and/or toxicity. An active autotomy promotion was observed in three studied sediments at different time points and reproduction impairment could be inferred in T. tubifex exposed to two of the tested sites after 28 days. The present study showed that sediment metal concentration and tissue residues followed significant regression models for four essential metals (Cu, Co, Ni and Zn) and one non-essential metal (Pb). Organic content normalization for As also showed a significant relationship with As tissue residue. Porewater was also revealed to be an important source of metal uptake for essential metals (e.g. Cu, Ni and Zn) and for As, but AVS content was not relevant for metal uptake in T. tubifex in studied sediments. Under the biodynamic concept, it was shown that influx rate from food (IF, sediment ingestion) in T. tubifex, in a range of sediment geochemistry, was able to predict metal bioaccumulation, especially of the essential metals Cu, Ni and Zn, and for the non-essential metal Pb. Additionally, IF appeared to be a better predictor for metal bioaccumulation in T. tubifex compared to sediment geochemistry normalization.

  18. Mutation accumulation in real branches: fitness assays for genomic deleterious mutation rate and effect in large-statured plants.

    PubMed

    Schultz, Stewart T; Scofield, Douglas G

    2009-08-01

    The genomic deleterious mutation rate and mean effect are central to the biology and evolution of all species. Large-statured plants, such as trees, are predicted to have high mutation rates due to mitotic mutation and the absence of a sheltered germ line, but their size and generation time has hindered genetic study. We develop and test approaches for estimating deleterious mutation rates and effects from viability comparisons within the canopy of large-statured plants. Our methods, inspired by E. J. Klekowski, are a modification of the classic Bateman-Mukai mutation-accumulation experiment. Within a canopy, cell lineages accumulate mitotic mutations independently. Gametes or zygotes produced at more distal points by these cell lineages contain more mitotic mutations than those at basal locations, and within-flower selfs contain more homozygous mutations than between-flower selfs. The resulting viability differences allow demonstration of lethal mutation with experiments similar in size to assays of genetic load and allow estimates of the rate and effect of new mutations with moderate precision and bias similar to that of classic mutation-accumulation experiments in small-statured organisms. These methods open up new possibilities with the potential to provide valuable new insights into the evolutionary genetics of plants.

  19. The accumulation rate of meteorite falls at the earth's surface - The view from Roosevelt County, New Mexico

    NASA Technical Reports Server (NTRS)

    Zolensky, Michael E.; Wells, Gordon L.; Rendell, Helen M.

    1990-01-01

    The discovery of 154 meteorite fragments within an 11-sq km area of wind-excavated basins in Roosevelt County, New Mexico, permits a new calculation of the accumulation rate of meteorite falls at the earth's surface. Thermoluminescence dating of the coversand unit comprising the prime recovery surface suggests the maximum terrestrial age of the meteorites to be about 16.0 ka. The 68 meteorite fragments subjected to petrological analyses represent a minimum of 49 individual falls. Collection bias has largely excluded carbonaceous chondrites and achondrites, requiring the accumulation rate derived from the recovered samples to be increased by a factor of 1.25. Terrestrial weathering destroying ordinary chondrites can be modeled as a first-order decay process with an estimated half-life of 3.5 + or - 1.9 ka on the semiarid American High Plains. Having accounted for the age of the recovery surface, area of field searches, pairing of finds, collection bias and weathering half-life, an accumulation rate of 940 falls/a per 10 to the 6th sq km is calculated for falls greater than 10 g total mass. This figure exceeds the best-constrained previous estimate by more than an order of magnitude. One possible reason for this disparity may be the extraordinary length of the fall record preserved in the surficial geology of Roosevelt County. The high accumulation rate determined for the past 16 ka may point to the existence of periods when the meteorite fall rate was significantly greater than at present.

  20. Predominant anthropogenic sources and rates of atmospheric mercury accumulation in southern Ontario recorded by peat cores from three bogs: comparison with natural "background" values (past 8000 years).

    PubMed

    Givelet, Nicolas; Roos-Barraclough, Fiona; Shotyk, William

    2003-12-01

    Peat cores from three bogs in southern Ontario provide a complete, quantitative record of net rates of atmospheric Hg accumulation since pre-industrial times. For comparison with modern values, a peat core extending back 8000 years was used to quantify the natural variations in Hg fluxes for this region, and their dependence on climatic change and land use history. The net mercury accumulation rates were separated into "natural" and "excess" components by comparing the Hg/Br ratios of modern samples with the long-term, pre-anthropogenic average Hg/Br. The average background mercury accumulation rate during the pre-anthropogenic period (from 5700 years BC to 1470 AD) was 1.4 +/- 1.0 microg m(-2) per year (n = 197). The beginning of Hg contamination from anthropogenic sources dates from AD 1475 at the Luther Bog, corresponding to biomass burning for agricultural activities by Native North Americans. During the late 17th and 18th centuries, deposition of anthropogenic Hg was at least equal to that of Hg from natural sources. Anthropogenic inputs of Hg to the bogs have dominated continuously since the beginning of the 19th century. The maximum Hg accumulation rates decrease in the order Sifton Bog, in the City of London, Ontario (141 microg Hg m(-2) per year), Luther Bog in an agricultural region (89 microg Hg m(-2) per year), and Spruce Bog which is in a comparatively remote, forested region (54 microg Hg m(-2) per year). Accurate age dating of recent peat samples using the bomb pulse curve of 14C shows that the maximum rate of atmospheric Hg accumulation occurred during AD 1956 and 1959 at all sites. In these (modern) samples, the Hg concentration profiles resemble those of Pb, an element which is known to be immobile in peat bogs. The correlation between these two metals, together with sulfur, suggests that the predominant anthropogenic source of Hg (and Pb) was coal burning. While Hg accumulation rates have gone into strong decline since the late 1950's, Hg

  1. Rates of Species Accumulation and Taxonomic Diversification during Phototrophic Biofilm Development Are Controlled by both Nutrient Supply and Current Velocity

    PubMed Central

    2013-01-01

    The accumulation of new and taxonomically diverse species is a marked feature of community development, but the role of the environment in this process is not well understood. To address this problem, we subjected periphyton in laboratory streams to low (10-cm · s−1), high (30-cm · s−1), and variable (9- to 32-cm · s−1) current velocity and low- versus high-nutrient inputs. We examined how current velocity and resource supply constrained (i) the rates of species accumulation, a measure of temporal beta-diversity, and (ii) the rates of diversification of higher taxonomic categories, defined here as the rate of higher taxon richness increase with the increase of species richness. Temporal biofilm dynamics were controlled by a strong nutrient-current interaction. Nutrients accelerated the rates of accumulation of new species, when flow velocity was not too stressful. Species were more taxonomically diverse under variable than under low-flow conditions, indicating that flow heterogeneity increased the niche diversity in the high-nutrient treatments. Conversely, the lower diversification rates under high- than under low-nutrient conditions at low velocity are explained with finer resource partitioning among species, belonging to a limited number of related genera. The overall low rates of diversification in high-current treatments suggest that the ability to withstand current stress was conserved within closely related species. Temporal heterogeneity of disturbance has been shown to promote species richness, but here we further demonstrate that it also affects two other components of biodiversity, i.e., temporal beta-diversity and diversification rate. Therefore, management efforts for preserving the inherent temporal heterogeneity of natural ecosystems will have detectable positive effects on biodiversity. PMID:23335757

  2. Metabolic control analysis of developing oilseed rape (Brassica napus cv Westar) embryos shows that lipid assembly exerts significant control over oil accumulation.

    PubMed

    Tang, Mingguo; Guschina, Irina A; O'Hara, Paul; Slabas, Antoni R; Quant, Patti A; Fawcett, Tony; Harwood, John L

    2012-10-01

    Metabolic control analysis allows the study of metabolic regulation. We applied both single- and double-manipulation top-down control analysis to examine the control of lipid accumulation in developing oilseed rape (Brassica napus) embryos. The biosynthetic pathway was conceptually divided into two blocks of reactions (fatty acid biosynthesis (Block A), lipid assembly (Block B)) connected by a single system intermediate, the acyl-coenzyme A (acyl-CoA) pool. Single manipulation used exogenous oleate. Triclosan was used to inhibit specifically Block A, whereas diazepam selectively manipulated flux through Block B. Exogenous oleate inhibited the radiolabelling of fatty acids from [1-(14)C]acetate, but stimulated that from [U-14C]glycerol into acyl lipids. The calculation of group flux control coefficients showed that c. 70% of the metabolic control was in the lipid assembly block of reactions. Monte Carlo simulations gave an estimation of the error of the resulting group flux control coefficients as 0.27±0.06 for Block A and 0.73±0.06 for Block B. The two methods of control analysis gave very similar results and showed that Block B reactions were more important under our conditions. This contrasts notably with data from oil palm or olive fruit cultures and is important for efforts to increase oilseed rape lipid yields.

  3. On the Effect of Ramp Rate in Damage Accumulation of the CPV Die-Attach: Preprint

    SciTech Connect

    Bosco, N. S.; Silverman, T. J.; Kurtz, S. R.

    2012-06-01

    It is commonly understood that thermal cycling at high temperature ramp rates may activate unrepresentative failure mechanisms. Increasing the temperature ramp rate of thermal cycling, however, could dramatically reduce the test time required to achieve an equivalent amount of thermal fatigue damage, thereby reducing overall test time. Therefore, the effect of temperature ramp rate on physical damage in the CPV die-attach is investigated. Finite Element Model (FEM) simulations of thermal fatigue and thermal cycling experiments are made to determine if the amount of damage calculated results in a corresponding amount of physical damage measured to the die-attach for a variety of fast temperature ramp rates. Preliminary experimental results are in good agreement with simulations and reinforce the potential of increasing temperature ramp rates. Characterization of the microstructure and resulting fatigue crack in the die-attach suggest a similar failure mechanism across all ramp rates tested.

  4. Transient absorption and photocurrent microscopy show that hot electron supercollisions describe the rate-limiting relaxation step in graphene.

    PubMed

    Graham, Matt W; Shi, Su-Fei; Wang, Zenghui; Ralph, Daniel C; Park, Jiwoong; McEuen, Paul L

    2013-01-01

    Using transient absorption (TA) microscopy as a hot electron thermometer, we show that disorder-assisted acoustic-phonon supercollisions (SCs) best describe the rate-limiting relaxation step in graphene over a wide range of lattice temperatures (Tl = 5-300 K), Fermi energies (E(F) = ± 0.35 eV), and optical probe energies (~0.3-1.1 eV). Comparison with simultaneously collected transient photocurrent, an independent hot electron thermometer, confirms that the rate-limiting optical and electrical response in graphene are best described by the SC-heat dissipation rate model, H = A(T(e)(3) - T(l)(3)). Our data further show that the electron cooling rate in substrate-supported graphene is twice as fast as in suspended graphene sheets, consistent with SC model prediction for disorder.

  5. Net accumulation rates derived from ice core stable isotope records of Pío XI glacier, Southern Patagonia Icefield

    NASA Astrophysics Data System (ADS)

    Schwikowski, M.; Schläppi, M.; Santibañez, P.; Rivera, A.; Casassa, G.

    2012-12-01

    Pío XI, the largest glacier of the Southern Patagonia Icefield, reached its neoglacial maximum extent in 1994 and is one of the few glaciers in that area which is not retreating. In view of the recent warming it is important to understand glacier responses to climate changes. Due to its remoteness and the harsh conditions in Patagonia, no systematic mass balance studies have been performed. In this study we derived net accumulation rates for the period 2000 to 2006 from a 50 m (33.2 4 m weq) ice core collected in the accumulation area of Pío XI (2600 m a.s.l., 49°16´40´´ S, 73°21´14´´ W). Borehole temperatures indicate near temperate ice, but the average melt percent is only 16% ± 14%. Records of stable isotopes are well preserved and were used for identification of annual layers. Net accumulation rates range from 3.4 to 7.1 water equivalent (m weq) with an average of 5.8 m weq, comparable to precipitation amounts at the Chilean coast, but not as high as expected for the Icefield. Ice core stable isotope data correlate well with upper air temperatures and may be used as temperature proxy.

  6. A method to reconstruct past accumulation rates in alpine firn regions: A study on Fiescherhorn, Swiss Alps

    NASA Astrophysics Data System (ADS)

    Schwerzmann, Aurel; Funk, Martin; Blatter, Heinz; Lüthi, Martin; Schwikowski, Margit; Palmer, Anne

    2006-03-01

    Annual snow layers in the accumulation zone of glaciers become thinner by viscous deformation while moving to greater depth. The reconstruction of the accumulation rate history requires the correction of the thickness of annual layers. We apply a novel method to determine the vertical velocity by repeated survey with a caliper probe of grooves scratched into the wall of a borehole. With this information and the assumptions of steady state velocity and density fields, the correction of layer thicknesses can be determined without knowledge of the ice density profile and thus can be applied to boreholes without ice cores. The method is applied to a borehole on Fiescherhorn, Swiss Alps, resulting in a substantially larger correction than with the simpler method of Nye (1963).

  7. Mercury accumulation in caged Corbicula: rate of uptake and seasonal variation.

    PubMed

    Neufeld, Douglas S G

    2010-09-01

    The uptake and seasonal fluctuations of total mercury were followed in caged and uncaged Asiatic clams, Corbicula fluminea, over a 1-year period in South River, Virginia. Mercury was rapidly accumulated in clams transplanted from a nominally uncontaminated site into cages on the contaminated South River, reaching 0.99 microg g(-1) dry mass within the first month. Resident clams moved to cages had higher mercury contents after the first month (2.04 microg g(-1) dry mass) and at all subsequent times in the study. Large monthly fluctuations in mercury were noted for both resident caged and transplant caged clams with a notable peak occurring in early spring (4.31 microg g(-1) dry mass in resident caged clams). Tissue mass of caged clams steadily increased through the winter and early spring. Adjustment of mercury concentrations for tissue mass changes indicated that the changes in mercury contents were primarily due to uptake/release rather than changes in tissue mass (concentration/dilution). The present study demonstrates the utility of using caged Corbicula as mercury biomonitors and illustrates the importance of accounting for large, short-term changes of mercury content in Corbicula when designing long-term biomonitoring studies.

  8. Growth rate, protein accumulation, and catabolic enzyme activity of skeletal muscles of galliform birds.

    PubMed

    Shea, Russell E; Olson, John M; Ricklefs, Robert E

    2007-01-01

    We measured the mass and several potential indices of functional capacity of the leg and pectoral muscles through 21 d of age in chicks of three species of galliform birds and the domesticated turkey. The study was conducted to test the hypothesis that the growth rate of a tissue is inversely related to its capacity for mature function across species. We measured the proportion of protein and the activities of the catabolic enzymes citrate synthase (CS), pyruvate kinase (PK), and beta -hydroxy-acyl-CoA-dehydrogenase (HOAD) and estimated exponential growth rate (EGR) from growth increments. EGR was negatively related to proportion of protein, PK, and HOAD and positively related to CS activity. In a multiple regression, EGR was uniquely related only to proportion of protein; it was higher in pectoral muscles and increased in this order: wild turkeyrate. When the proportion of protein was normalized by its maximum value for each species and muscle type, the relationship between EGR and normalized protein did not differ significantly among species or muscle type. Thus, if we accept the proportion of protein relative to the mature level as an index of functional capacity--presumably representing the assembly of the contractile apparatus--then growth rate is consistently inversely related to a muscle's capacity for mature function, that is, force generation.

  9. Sediment accumulation rates in Conowingo Reservoir as determined by man-made and natural radionuclides

    SciTech Connect

    McLean, R.I.; Domotor, S.L. ); Summers, J.K.; Wilson, H. ); Olsen, C.R.; Larsen, I.L. )

    1991-05-01

    The Susquehanna River is the major contributor to sediment loadings in the Chesapeake Bay. Because many environmental contaminants are associated with suspended particulates, the degree of particle retention within the reservoirs of the lower Susquehanna River is an important consideration in evaluating contaminant loadings to the Chesapeake Bay. Profiles of weapons-test Cs-137, nuclear power plant-related Cs-134 and Cs-137, and naturally-derived Pb-210 were used to estimate rates of sediment accretion in the Conowingo Reservoir,an impoundmment of the Susquehanna River along the Maryland-Pennsylvania border. Net accretion rates ranged from about 2 cm yr{sup {minus}1} downstream of a nuclear power plant cooling discharge to a high of about 7 cm yr{sup {minus}1} at the mount of an incoming creek. Slight, but consistent, increases in the annual rate of accretion since the creation of the reservoir in 1928 are apparent. The current net average annual sediment load retained by the reservoir is estimated to be 0.4 {times} 10{sup 6} to 1.5 {times} 10{sup 6} metric tons yr{sup {minus}1}. The retained sediment load represents about 8-23% of the long-time average sediment input to the reservoir.

  10. Accumulation Rates in the Dry Snow Zone of the Greenland Ice Sheet Inferred from L-band InSAR Data

    NASA Astrophysics Data System (ADS)

    Chen, A. C.; Zebker, H. A.

    2012-12-01

    The Greenland ice sheet contains about 2.9 million km3 of ice and would raise global sea levels by about 7.1 m if it melted completely. Two unusually large iceberg calving events at Petermann Glacier in the past several years, along with the unusually large extent of ice sheet melt this summer point to the relevance of understanding the mass balance of the Greenland ice sheet. In this study, we use data from the PALSAR instrument aboard the ALOS satellite to form L-band (23-centimeter carrier wavelength) InSAR images of the dry snow zone of the Greenland ice sheet. We form geocoded differential interferograms, using the ice sheet elevation model produced by Howat et.al. [1]. By applying phase and radiometric calibration, we can examine interferograms formed between any pair of transmit and receive polarization channels. In co-polarized interferograms, the InSAR correlation ranges from about 0.35 at the summit (38.7 deg W, 73.0 deg N) where accumulation is about 20 cm w.e./yr to about 0.70 at the north-eastern part of the dry snow zone (35.1 deg W, 77.1 deg N), where accumulation is about 11.7 cm w.e./yr. Cross-polarized interferograms show similar geographic variation with overall lower correlation. We compare our InSAR data with in-situ measurements published by Bales et.al. [2]. We examine the applicability of dense-medium radiative transfer electromagnetic scattering models for estimating accumulation rates from L-band InSAR data. The large number and broad coverage of ALOS scenes acquired between 2007 and 2009 with good InSAR coherence at 46-day repeat times and 21.5 degree incidence angles gives us the opportunity to examine the empirical relationship between in-situ accumulation rate observations and the polarimetric InSAR correlation and radar brightness at this particular imaging geometry. This helps us quantify the accuracy of accumulation rates estimated from InSAR data. In some regions, 46-day interferograms acquired in the winters of several consecutive

  11. Effect of self-alkalization on nitrite accumulation in a high-rate denitrification system: Performance, microflora and enzymatic activities.

    PubMed

    Li, Wei; Shan, Xiao-Yu; Wang, Zhi-Yao; Lin, Xiao-Yu; Li, Chen-Xu; Cai, Chao-Yang; Abbas, Ghulam; Zhang, Meng; Shen, Li-Dong; Hu, Zhi-Qiang; Zhao, He-Ping; Zheng, Ping

    2016-01-01

    The self-alkalization of denitrifying automatic circulation (DAC) reactor resulted in a large increase of pH up to 9.20 and caused a tremendous accumulation of nitrite up to 451.1 ± 49.0 mgN L(-1) at nitrate loading rate (NLR) from 35 kgN m(-3) d(-1) to 55 kgN m(-3) d(-1). The nitrite accumulation was greatly relieved even at the same NLR once the pH was maintained at 7.6 ± 0.2 in the system. Enzymatic assays indicated that the long-term bacterial exposure to high pH significantly inhibited the activity of copper type nitrite reductase (NirK) rather than the cytochrome cd1 type nitrite reductase (NirS). The terminal restriction fragment length polymorphism (T-RFLP) analysis revealed that the dominant denitrifying bacteria shifted from the NirS-containing Thauear sp. 27 to the NirK-containing Hyphomicrobium nitrativorans strain NL23 during the self-alkalization. The significant nitrite accumulation in the high-rate denitrification system could be therefore, due to the inhibition of Cu-containing NirK by high pH from the self-alkalization. The results suggest that the NirK-containing H. nitrativorans strain NL23 could be an ideal functional bacterium for the conversion of nitrate to nitrite, i.e. denitritation, which could be combined with anaerobic ammonium oxidation (Anammox) to develop a new process for nitrogen removal from wastewater.

  12. Rate of denitrification and the accumulation of intermediates in a denitrifying bioreactor

    NASA Astrophysics Data System (ADS)

    Parsignault, D. R.; Gursky, H.; Kellogg, E. M.; Matilsky, T.; Murray, S.; Schreier, E.; Tananbaum, H.; Giacconi, R.; Brinkman, A. C.

    2012-12-01

    Denitrifying bioreactors (DNBRs) are an emerging mechanism to mitigate the impact of excess reactive nitrogen by harnessing the activity of ubiquitous denitrifying soil microbes. DNBRs fundamentally consist of an organic carbon energy source sufficiently saturated to develop anaerobic conditions and support heterotrophic reduction of nitrate to dinitrogen. Although recent research has well established achievable nitrate removal in DNBRs upwards of 90%, few studies experimentally determine the fate of nitrogen in these systems. This study differentiates between denitrification to inert nitrogen gas, which permanently removes reactive nitrogen from an enriched ecosystem, and transformation of nitrate to another bioavailable form (such as N2O or NOX, powerful greenhouse gases). Previous research has failed to make this distinction and as both are perceived as a reduction in nitrate concentration at the outlet, the utility of DNBRs in reducing downstream reactive nitrogen has not been sufficiently established. In order to quantify the rate of nitrate removal and the products produced, dissolved gas samples are collected from the DNBR with passive diffusion gas samplers while the influent and effluent nitrate concentration and chemical oxygen demand are monitored in real time with spectrometer probes. Nitrate removal is compared with the denitrification rate and the ratio of dinitrogen to nitrous oxide is reported. Denitrification is quantified from the proportion of nitrogen gas products produced from the nitrate pool, indicated by the negative congruence of the regression of 15N enrichment in the nitrate pool and temporal depletion in the gaseous products. The proportion of nitrous oxide to dinitrogen is examined with respect to saturation and redox potential. This research informs the interpretation of previous studies as well as advises the focus of long-term system level monitoring that will provide further information on the design and application of DNBRs to

  13. Relationships between salinity and short-term soil carbon accumulation rates form marsh types across a landscape in the Mississippi River Delta

    USGS Publications Warehouse

    Baustian, Melissa M.; Stagg, Camille L.; Perry, Carey L; Moss, Leland C; Carruthers, Tim J.B.; Allison, Mead

    2017-01-01

    Salinity alterations will likely change the plant and environmental characteristics in coastal marshes thereby influencing soil carbon accumulation rates. Coastal Louisiana marshes have been historically classified as fresh, intermediate, brackish, or saline based on resident plant community and position along a salinity gradient. Short-term total carbon accumulation rates were assessed by collecting 10-cm deep soil cores at 24 sites located in marshes spanning the salinity gradient. Bulk density, total carbon content, and the short-term accretion rates obtained with feldspar horizon markers were measured to determine total carbon accumulation rates. Despite some significant differences in soil properties among marsh types, the mean total carbon accumulation rates among marsh types were not significantly different (mean ± std. err. of 190 ± 27 g TC m−2 year−1). However, regression analysis indicated that mean annual surface salinity had a significant negative relationship with total carbon accumulation rates. Based on both analyses, the coastal Louisiana total marsh area (1,433,700 ha) accumulates about 2.7 to 3.3 Tg C year−1. Changing salinities due to increasing relative sea level or resulting from restoration activities may alter carbon accumulation rates in the short term and significantly influence the global carbon cycle.

  14. Understanding the rates of nonpolar organic chemical accumulation into passive samplers deployed in the environment: Guidance for passive sampler deployments.

    PubMed

    Apell, Jennifer N; Tcaciuc, A Patricia; Gschwend, Philip M

    2016-07-01

    Polymeric passive samplers have become a common method for estimating freely dissolved concentrations in environmental media. However, this approach has not yet been adopted by investigators conducting remedial investigations of contaminated environmental sites. Successful adoption of this sampling methodology relies on an understanding of how passive samplers accumulate chemical mass as well as developing guidance for the design and deployment of passive samplers. Herein, we outline the development of a simple mathematical relationship of the environmental, polymer, and chemical properties that control the uptake rate. This relationship, called a timescale, is then used to illustrate how each property controls the rate of equilibration in samplers deployed in the water or in the sediment. Guidance is also given on how to use the timescales to select an appropriate polymer, deployment time, and suite of performance reference compounds. Integr Environ Assess Manag 2016;12:486-492. © 2015 SETAC.

  15. Biogenic silica fluxes and accumulation rates in the Gulf of California

    SciTech Connect

    Thunell, R.C.; Pride, C.J.; Tappa, E. ); Muller-Karger, F.E. )

    1994-04-01

    The Gulf of California, though small in size, plays an important role in the global silica cycle. The seasonal pattern of biogenic silica flux in the gulf is closely related to that of phytoplankton biomass levels and is controlled by changes in weather and hydrographic conditions. The highest opal fluxes ([approximately] 0.35 g[center dot]m[sup [minus]2][center dot]d[sup [minus]1]) occur during winter and spring, and they are comparable to those measured in some of the most productive ecosystems of the world. Approximately 15%-25% of the biogenic silica produced in surface waters is preserved in gulf sediments, a figure significantly higher than the average global ocean preservation rate. However, the flux of opal at 500 m water depth is less than 25% of that being produced at the surface, suggesting that most of the recycling of biogenic silica in the Gulf of California occurs in the upper water column. 28 refs., 3 figs.

  16. Identification of genes showing differential expression profile associated with growth rate in skeletal muscle tissue of Landrace weanling pig.

    PubMed

    Komatsu, Yuuta; Sukegawa, Shin; Yamashita, Mai; Katsuda, Naoki; Tong, Bin; Ohta, Takeshi; Kose, Hiroyuki; Yamada, Takahisa

    2016-06-01

    Suppression subtractive hybridization was used to identify genes showing differential expression profile associated with growth rate in skeletal muscle tissue of Landrace weanling pig. Two subtracted cDNA populations were generated from musculus longissimus muscle tissues of selected pigs with extreme expected breeding values at the age of 100 kg. Three upregulated genes (EEF1A2, TSG101 and TTN) and six downregulated genes (ATP5B, ATP5C1, COQ3, HADHA, MYH1 and MYH7) in pig with genetic propensity for higher growth rate were identified by sequence analysis of 12 differentially expressed clones selected by differential screening following the generation of the subtracted cDNA population. Real-time PCR analysis confirmed difference in expression profiles of the identified genes in musculus longissimus muscle tissues between the two Landrace weanling pig groups with divergent genetic propensity for growth rate. Further, differential expression of the identified genes except for the TTN was validated by Western blot analysis. Additionally, the eight genes other than the ATP5C1 colocalized with the same chromosomal positions as QTLs that have been previously identified for growth rate traits. Finally, the changes of expression predicted from gene function suggested association of upregulation of expression of the EEF1A2, TSG101 and TTN genes and downregulation of the ATP5B, ATP5C1, COQ3, HADHA, MYH1 and MYH7 gene expression with increased growth rate. The identified genes will provide an important insight in understanding the molecular mechanism underlying growth rate in Landrace pig breed.

  17. Preferential accumulation of sex and Bs chromosomes in biarmed karyotypes by meiotic drive and rates of chromosomal changes in fishes.

    PubMed

    Molina, Wagner F; Martinez, Pablo A; Bertollo, Luiz A C; Bidau, Claudio J

    2014-12-01

    Mechanisms of accumulation based on typical centromeric drive or of chromosomes carrying pericentric inversions are adjusted to the general karyotype differentiation in the principal Actinopterygii orders. Here, we show that meiotic drive in fish is also supported by preferential establishment of sex chromosome systems and B chromosomes in orders with predominantly bi-brachial chromosomes. The mosaic of trends acting at an infra-familiar level in fish could be explained as the interaction of the directional process of meiotic drive as background, modulated on a smaller scale by adaptive factors or specific karyotypic properties of each group, as proposed for the orthoselection model.

  18. Do monkey F5 mirror neurons show changes in firing rate during repeated observation of natural actions?

    PubMed

    Kilner, J M; Kraskov, A; Lemon, R N

    2014-03-01

    Mirror neurons were first discovered in area F5 of macaque monkeys. In humans, noninvasive studies have demonstrated an increased blood oxygen level-dependent (BOLD) signal in homologous motor areas during action observation. One approach to demonstrating that this indicates the existence of mirror neurons in humans has been to employ functional (f)MRI adaptation to test whether the same population of neurons is active during both observation and execution conditions. Although a number of human studies have reported fMRI adaptation in these areas, a recent study has shown that macaque mirror neurons do not attenuate their firing rate with two repetitions. Here we investigated whether mirror neurons modulate their firing rate when monkeys observed the same repeated natural action multiple times. We recorded from 67 mirror neurons in area F5 of two macaque monkeys while they observed an experimenter perform a reach-to-grasp action on a small food reward using a precision grip. Although no changes were detectable for the first two repetitions, we show that both the firing rate and the latency at which mirror neurons discharged during observation were subtly modulated by the repetition of the observed action over 7-10 trials. Significant adaption was mostly found in the period immediately before the grasp was performed. We also found that the local field potential activity in F5 (beta-frequency range, 16-23 Hz), which is attenuated during action observation, also showed systematic changes with repeated observation. These LFP changes occurred well in advance of the mirror neuron adaptation. We conclude that macaque mirror neurons can show intra-modal adaptation, but whether this is related to fMRI adaptation of the BOLD signal requires further investigation.

  19. Biomass Accumulation Rates of Amazonian Secondary Forest and Biomass of Old-Growth Forests from Landsat Time Series and GLAS

    NASA Astrophysics Data System (ADS)

    Helmer, E.; Lefsky, M. A.; Roberts, D.

    2009-12-01

    We estimate the age of humid lowland tropical forests in Rondônia, Brazil, from a somewhat densely spaced time series of Landsat images (1975-2003) with an automated procedure, the Threshold Age Mapping Algorithm (TAMA), first described here. We then estimate a landscape-level rate of aboveground woody biomass accumulation of secondary forest by combining forest age mapping with biomass estimates from the Geoscience Laser Altimeter System (GLAS). Though highly variable, the estimated average biomass accumulation rate of 8.4 Mg ha-1 yr-1 agrees well with ground-based studies for young secondary forests in the region. In isolating the lowland forests, we map land cover and general types of old-growth forests with decision tree classification of Landsat imagery and elevation data. We then estimate aboveground live biomass for seven classes of old-growth forest. TAMA is simple, fast, and self-calibrating. By not using between-date band or index differences or trends, it requires neither image normalization nor atmospheric correction. In addition, it uses an approach to map forest cover for the self-calibrations that is novel to forest mapping with satellite imagery; it maps humid secondary forest that is difficult to distinguish from old-growth forest in single-date imagery; it does not assume that forest age equals time since disturbance; and it incorporates Landsat Multispectral Scanner (MSS) imagery. Variations on the work that we present here can be applied to other forested landscapes. Applications that use image time series will be helped by the free distribution of coregistered Landsat imagery, which began in December 2008, and of the Ice Cloud and land Elevation Satellite (ICESat) Vegetation Product, which simplifies the use of GLAS data. Finally, we demonstrate here for the first time how the optical imagery of fine spatial resolution that is viewable on Google Earth provides a new source of reference data for remote sensing applications related to land cover

  20. Accumulation of Cd by the marine sponge Halichondria panicea pallas: Effects upon filtration rate and its relevance for biomonitoring

    SciTech Connect

    Olesen, T.M.E.; Weeks, J.M. )

    1994-05-01

    The marine demosponge Halichondria panicea Pallas, is a cosmopolitan species occurring in coastal waters with varied conditions of light, current, salinity and turbidity. H. panicea has a leuconoid structure and is composed of siliceous spicules and spongin fibers. Sponges are important members of many shallow water marine benthic communities, but comparatively little is known of their trace metal biology. Sponge architecture is constructed around a system of water canals and the physiology of the sponge is largely dependent on the currents of water flowing through their bodies. The volume of water pumped by a sponge is remarkable, ca. 100-1200 ml h[sup [minus]1] g[sup [minus]1]. This large volume of water passing through the body of a sponge means that most cells are in direct contact with the external medium. Many sponges are able to accumulate trace metals and are highly tolerant of such pollutants. This has led to the proposal that a [open quotes]sponge watch[close quotes] program be initiated supplementary to the existing [open quotes]mussel watch[close quotes] program. In view of the large volume of water passing through the bodies of sponges such as H. panicea, the suitability of this species as a biomonitoring organism was further investigated. This study describes the accumulation strategy of the demosponge H. panicea exposed to dissolved cadmium (Cd) and the effect of Cd upon sponge filtration rate.

  1. Belowground carbon balance and carbon accumulation rate in the successional series of monsoon evergreen broad-leaved forest

    USGS Publications Warehouse

    Zhou, G.; Liu, S.; Tang, X.; Ouyang, X.; Zhang, Dongxiao; Liu, J.; Yan, J.; Zhou, C.; Luo, Y.; Guan, L.; Liu, Yajing

    2006-01-01

    The balance, accumulation rate and temporal dynamics of belowground carbon in the successional series of monsoon evergreen broadleaved forest are obtained in this paper, based on long-term observations to the soil organic matter, input and standing biomass of litter and coarse woody debris, and dissolved organic carbon carried in the hydrological process of subtropical climax forest ecosystem—monsoon evergreen broad-leaved forest, and its two successional forests of natural restoration—coniferous and broad-leaved mixed forest and Pinus massoniana forest, as well as data of root biomass obtained once every five years and respiration measurement of soil, litter and coarse woody debris respiration for 1 year. The major results include: the belowground carbon pools of monsoon evergreen broad-leaved forest, coniferous and broad-leaved mixed forest, and Pinus massoniana forest are 23191 ± 2538 g · m−2, 16889 ± 1936 g · m−2 and 12680 ± 1854 g · m−2, respectively, in 2002. Mean annual carbon accumulation rates of the three forest types during the 24a from 1978 to 2002 are 383 ± 97 g · m−2 · a−1, 193 ± 85 g · m−2 · a−1 and 213 ± 86 g · m−2 · a−1, respectively. The belowground carbon pools in the three forest types keep increasing during the observation period, suggesting that belowground carbon pools are carbon sinks to the atmosphere. There are seasonal variations, namely, they are strong carbon sources from April to June, weak carbon sources from July to September; while they are strong carbon sinks from October to November, weak carbon sinks from December to March.

  2. Drinking water boosts food intake rate, body mass increase and fat accumulation in migratory blackcaps (Sylvia atricapilla).

    PubMed

    Tsurim, Ido; Sapir, Nir; Belmaker, Jonathan; Shanni, Itai; Izhaki, Ido; Wojciechowski, Michał S; Karasov, William H; Pinshow, Berry

    2008-05-01

    Fat accumulation by blackcaps (Sylvia atricapilla) is a prerequisite for successful migratory flight in the autumn and has recently been determined to be constrained by availability of drinking water. Birds staging in a fruit-rich Pistacia atlantica plantation that had access to water increased their body mass and fat reserves both faster and to a greater extent than birds deprived of water. We conducted a series of laboratory experiments on birds captured during the autumn migration period in which we tested the hypotheses that drinking water increases food use by easing limitations on the birds' dietary choices and, consequently, feeding and food processing rates, and that the availability of drinking water leads to improved digestion and, therefore, to higher apparent metabolizable energy. Blackcaps were trapped in autumn in the Northern Negev Desert, Israel and transferred to individual cages in the laboratory. Birds were provided with P. atlantica fruit and mealworms, and had either free access to water (controls) or were water-deprived. In experiment 1, in which mealworm availability was restricted, water-deprived birds had a fourfold lower fruit and energy intake rates and, consequently, gained less fat and total mass than control birds. Water availability did not affect food metabolizability. In experiment 2, in which mealworms were provided ad libitum, water availability influenced the birds' diet: water-restricted birds ate more mealworms, while control birds consumed mainly P. atlantica fruit. Further, in experiment 2, fat and mass gain did not differ between the two treatment groups. We conclude that water availability may have important consequences for fat accumulation in migrating birds while they fatten at stopover sites, especially when water-rich food is scarce. Restricted water availability may also impede the blackcap's dietary shift from insectivory to frugivory, a shift probably necessary for successful pre-migratory fattening.

  3. Essentiality Is a Strong Determinant of Protein Rates of Evolution during Mutation Accumulation Experiments in Escherichia coli.

    PubMed

    Alvarez-Ponce, David; Sabater-Muñoz, Beatriz; Toft, Christina; Ruiz-González, Mario X; Fares, Mario A

    2016-09-26

    The Neutral Theory of Molecular Evolution is considered the most powerful theory to understand the evolutionary behavior of proteins. One of the main predictions of this theory is that essential proteins should evolve slower than dispensable ones owing to increased selective constraints. Comparison of genomes of different species, however, has revealed only small differences between the rates of evolution of essential and nonessential proteins. In some analyses, these differences vanish once confounding factors are controlled for, whereas in other cases essentiality seems to have an independent, albeit small, effect. It has been argued that comparing relatively distant genomes may entail a number of limitations. For instance, many of the genes that are dispensable in controlled lab conditions may be essential in some of the conditions faced in nature. Moreover, essentiality can change during evolution, and rates of protein evolution are simultaneously shaped by a variety of factors, whose individual effects are difficult to isolate. Here, we conducted two parallel mutation accumulation experiments in Escherichia coli, during 5,500-5,750 generations, and compared the genomes at different points of the experiments. Our approach (a short-term experiment, under highly controlled conditions) enabled us to overcome many of the limitations of previous studies. We observed that essential proteins evolved substantially slower than nonessential ones during our experiments. Strikingly, rates of protein evolution were only moderately affected by expression level and protein length.

  4. Isolation and characterization of a radiation-resistant bacterium from Taklamakan Desert showing potent ability to accumulate Lead (II) and considerable potential for bioremediation of radioactive wastes.

    PubMed

    Luo, Xuesong; Zeng, Xian-Chun; He, Zhancan; Lu, Xiaolu; Yuan, Jie; Shi, Jingjing; Liu, Ming; Pan, Yunfan; Wang, Yan-Xin

    2014-12-01

    Radioactive wastes always contain radioactive substances and a lot of Pb compound and other heavy metals, which severely contaminate soils and groundwater. Thus, search for radiation-resistant microorganisms that are capable of sequestering Pb contaminants from the contaminated sites is urgently needed. However, very few such microorganisms have been found so far. In the present study, we discovered a novel Gram-negative bacterium from the arid Taklamakan desert, which can strongly resist both radiation and Pb(2+). Phylogenetic and phenotypic analysis indicated that this bacterial strain is closely affiliated with Microvirga aerilata, and was thus referred to as Microvirga aerilata LM (=CCTCC AB 208311). We found that M. aerilata LM can effectively accumulate Pb and form intracellular precipitations. It also keeps similar ability to remove Pb(2+) under radioactive stress. Our data suggest that M. aerilata LM may offer an effective and eco-friendly in situ approach to remove soluble Pb contaminants from radioactive wastes.

  5. Effects of greenhouse warming and N-fertilization on carbon accumulation rates in a nutrient-poor boreal mire: decadal effects assessed using 210Pb

    NASA Astrophysics Data System (ADS)

    Olid, Carolina; Nilsson, Mats B.; Eriksson, Tobias; Klaminder, Jonatan

    2013-04-01

    Boreal peatlands represent a major long-term reservoir of atmospheric carbon (C) and play an important role in the global C cycle. How C accumulation in these peatlands responds to changing temperature and nutrient conditions is under debate. In this study, we assessed how peat and C accumulation rates have responded to increased annual nitrogen additions (30 kg ha-1 yr-1) and increased air temperatures (+3.6°C) in the longest ongoing boreal mire manipulation experiment. Accumulation rates for the uppermost 40 cm of peat in nitrogen and temperature treated plots (n=11) were assessed by 210Pb dating covering the last ~100yrs. A reference surface, installed in 1995 was used as independent validation of the dating model. An empirically based model of organic matter accumulation/degradation was applied to evaluate changes in both peat inputs and organic matter decay rates in response to the treatments. A significant increase in C-accumulation (15 g C m-2 yr-1) was observed in peat subjected to nitrogen additions, while greenhouse warming did not seem to significantly affect C-accumulation or decay rates. Based on our findings we argue that C-accumulation in nutrient poor boreal mires is mainly altered in near-surface peat layers (~15 cm) in response to nitrogen additions and that the uppermost peat layers (<40 cm) in nutrient poor boreal peatlands will continue to function as net C-sinks during the first decades of global warming.

  6. Soil weathering and accumulation rates of oxalate-extractable phases derived from alpine chronosequences of up to 1 Ma in age

    NASA Astrophysics Data System (ADS)

    Dahms, Dennis; Favilli, Filippo; Krebs, Rolf; Egli, Markus

    2012-05-01

    In this study we compare newly-developed chemical weathering data with previously published data from soils developed along two chronosequences of glacial deposits in the European Alps and the Rocky Mountains (Wind River Range, USA). By combining these chronosequences, we are able to present a comprehensive dataset that represents a time period of > 1 Ma. We describe weathering trends of important elements using a number of weathering indices (e.g., K + Ca/Ti ratio, the weathering 'index B' of Kronberg and Nesbitt (1981) and the open mass transport function). Further, we describe the accumulation of Al, Fe, Si and Mn oxyhydroxides (including partially organic phases) as a function of time, and derive the corresponding accumulation rates. We calculated pedogenetically formed oxyhydroxides using an approach based on immobile elements. Our study represents one of only a few studies that describe rates of soil chemical weathering over a period as long as ~ 1 Ma. Results show that rates of chemical weathering clearly decrease along the chronosequences with increasing age of the soils. We find weathering rates are nearly four orders of magnitude lower in the 1 Ma-old soils than in the young soils. Our results suggest that the older soils may be reaching a steady state for these chemical properties in their present environments. A power function best explains the measured time-trends of the 'index B' and (K + Ca)/Ti) ratios in the soils. The best time-trend model for pedogenic weakly- to poorly crystalline phases and the relative losses/gains (based on the open-system mass transport function) were obtained with an exponential decay model function. In terms of the soil system, the decreases in the accumulation rate of the oxyhydroxides appears to be influenced not only by the factor of time but by climate as well (increased precipitation at higher altitudes slows the decrease in weathering rate over time). Thus, our ~ 1 Ma chronosequences also become pedogenic gradients

  7. Docosahexaenoate-containing molecular species of glycerophospholipids from frog retinal rod outer segments show different rates of biosynthesis and turnover

    SciTech Connect

    Louie, K.; Wiegand, R.D.; Anderson, R.E.

    1988-12-13

    The authors have studied the de novo synthesis and subsequent turnover of major docosahexaenoate-containing molecular species in frog rod outer segment (ROS) phospholipids following intravitreal injection of (2-/sup 3/H)glycerol. On selected days after injection, ROS were prepared and phospholipids extracted. Phosphatidylcholine (PC), phosphatidylethanolamine (PE), and phosphatidylserine (PS) were isolated and converted to diradylglycerols with phospholipase C. Diradylglycerols were derivatized with benzoic anhydride and resolve into diacylglycerobenzoates and ether-linked glycerobenzoates. The diacylglycerobenzoates were fractionated into molecular species by HPLC, quantitated, and counted for radioactivity. Label was incorporated into ROS phospholipids by day 1 and was followed up through the eighth day. The dipolyenoic species 22:6-22:6 from PC showed 1 3-5 times higher radiospecific activity than the same species from either PE or PS. The rate of decline was determined by calculating the half-life of each molecular species, which was used as a measure of the turnover of the species. The percent distribution of radioactivity in the molecular species of PC and PE was quite different from the relative mass distribution at day 1. However, percent dpm approached the mole percent by 31 days. In PS, percent dpm and mole percent were the same at all time points. These results indicate that the molecular species composition of PC and PE in frog retinal ROS is determined by a combination of factors, which include rate of synthesis, rate of degradation, and selective interconversions. In contrast, PS composition appears to be determined at the time of synthesis.

  8. Processes and rates of sediment and wood accumulation in headwater streams of the Oregon Coast Range, USA

    USGS Publications Warehouse

    May, Christine L.; Gresswell, Robert E.

    2003-01-01

    Channels that have been scoured to bedrock by debris flows provide unique opportunities to calculate the rate of sediment and wood accumulation in low-order streams, to understand the temporal succession of channel morphology following disturbance, and to make inferences about processes associated with input and transport of sediment. Dendrochronology was used to estimate the time since the previous debris flow and the time since the last stand-replacement fire in unlogged basins in the central Coast Range of Oregon. Debris flow activity increased 42 per cent above the background rate in the decades immediately following the last wildfire. Changes in wood and sediment storage were quantified for 13 streams that ranged from 4 to 144 years since the previous debris flow. The volume of wood and sediment in the channel, and the length of channel with exposed bedrock, were strongly correlated with the time since the previous debris flow. Wood increased the storage capacity of the channel and trapped the majority of the sediment in these steep headwater streams. In the absence of wood, channels that have been scoured to bedrock by a debris flow may lack the capacity to store sediment and could persist in a bedrock state for an extended period of time. With an adequate supply of wood, low-order channels have the potential of storing large volumes of sediment in the interval between debris flows and can function as one of the dominant storage reservoirs for sediment in mountainous terrain.

  9. Functional Response (FR) and Relative Growth Rate (RGR) Do Not Show the Known Invasiveness of Lemna minuta (Kunth)

    PubMed Central

    Boets, Pieter; Goethals, Peter L. M.

    2016-01-01

    Growing travel and trade threatens biodiversity as it increases the rate of biological invasions globally, either by accidental or intentional introduction. Therefore, avoiding these impacts by forecasting invasions and impeding further spread is of utmost importance. In this study, three forecasting approaches were tested and combined to predict the invasive behaviour of the alien macrophyte Lemna minuta in comparison with the native Lemna minor: the functional response (FR) and relative growth rate (RGR), supplemented with a combined biomass-based nutrient removal (BBNR). Based on the idea that widespread invasive species are more successful competitors than local, native species, a higher FR and RGR were expected for the invasive compared to the native species. Five different nutrient concentrations were tested, ranging from low (4 mgN.L-1 and 1 mgP.L-1) to high (70 mgN.L-1 and 21 mgP.L-1). After four days, a significant amount of nutrients was removed by both Lemna spp., though significant differences among L. minor and L. minuta were only observed at lower nutrient concentrations (lower than 17 mgN.L-1 and 6 mgP.L-1) with higher nutrient removal exerted by L. minor. The derived FR did not show a clear dominance of the invasive L. minuta, contradicting field observations. Similarly, the RGR ranged from 0.4 to 0.6 d-1, but did not show a biomass-based dominance of L. minuta (0.5 ± 0.1 d-1 versus 0.63 ± 0.09 d-1 for L. minor). BBNR showed similar results as the FR. Contrary to our expectations, all three approaches resulted in higher values for L. minor. Consequently, based on our results FR is sensitive to differences, though contradicted the expectations, while RGR and BBNR do not provide sufficient power to differentiate between a native and an invasive alien macrophyte and should be supplemented with additional ecosystem-based experiments to determine the invasion impact. PMID:27861603

  10. Non-expert listeners show decreased heart rate and increased blood pressure (fear bradycardia) in response to atonal music

    PubMed Central

    Proverbio, Alice M.; Manfrin, Luigi; Arcari, Laura A.; De Benedetto, Francesco; Gazzola, Martina; Guardamagna, Matteo; Lozano Nasi, Valentina; Zani, Alberto

    2015-01-01

    Previous studies suggested that listening to different types of music may modulate differently psychological mood and physiological responses associated with the induced emotions. In this study the effect of listening to instrumental classical vs. atonal contemporary music was examined in a group of 50 non-expert listeners. The subjects’ heart rate and diastolic and systolic blood pressure values were measured while they listened to music of different style and emotional typologies. Pieces were selected by asking a group of composers and conservatory professors to suggest a list of the most emotional music pieces (from Renaissance to present time). A total of 214 suggestions from 20 respondents were received. Then it was asked them to identify which pieces best induced in the listener feelings of agitation, joy or pathos and the number of suggested pieces per style was computed. Atonal pieces were more frequently indicated as agitating, and tonal pieces as joyful. The presence/absence of tonality in a musical piece did not affect the affective dimension of pathos (being touching). Among the most frequently cited six pieces were selected that were comparable for structure and style, to represent each emotion and style. They were equally evaluated as unfamiliar by an independent group of 10 students of the same cohort) and were then used as stimuli for the experimental session in which autonomic parameters were recorded. Overall, listening to atonal music (independent of the pieces’ emotional characteristics) was associated with a reduced heart rate (fear bradycardia) and increased blood pressure (both diastolic and systolic), possibly reflecting an increase in alertness and attention, psychological tension, and anxiety. This evidence fits with the results of the esthetical assessment showing how, overall, atonal music is perceived as more agitating and less joyful than tonal one. PMID:26579029

  11. Non-expert listeners show decreased heart rate and increased blood pressure (fear bradycardia) in response to atonal music.

    PubMed

    Proverbio, Alice M; Manfrin, Luigi; Arcari, Laura A; De Benedetto, Francesco; Gazzola, Martina; Guardamagna, Matteo; Lozano Nasi, Valentina; Zani, Alberto

    2015-01-01

    Previous studies suggested that listening to different types of music may modulate differently psychological mood and physiological responses associated with the induced emotions. In this study the effect of listening to instrumental classical vs. atonal contemporary music was examined in a group of 50 non-expert listeners. The subjects' heart rate and diastolic and systolic blood pressure values were measured while they listened to music of different style and emotional typologies. Pieces were selected by asking a group of composers and conservatory professors to suggest a list of the most emotional music pieces (from Renaissance to present time). A total of 214 suggestions from 20 respondents were received. Then it was asked them to identify which pieces best induced in the listener feelings of agitation, joy or pathos and the number of suggested pieces per style was computed. Atonal pieces were more frequently indicated as agitating, and tonal pieces as joyful. The presence/absence of tonality in a musical piece did not affect the affective dimension of pathos (being touching). Among the most frequently cited six pieces were selected that were comparable for structure and style, to represent each emotion and style. They were equally evaluated as unfamiliar by an independent group of 10 students of the same cohort) and were then used as stimuli for the experimental session in which autonomic parameters were recorded. Overall, listening to atonal music (independent of the pieces' emotional characteristics) was associated with a reduced heart rate (fear bradycardia) and increased blood pressure (both diastolic and systolic), possibly reflecting an increase in alertness and attention, psychological tension, and anxiety. This evidence fits with the results of the esthetical assessment showing how, overall, atonal music is perceived as more agitating and less joyful than tonal one.

  12. Rice interspecies hybrids show precocious or delayed developmental transitions in the endosperm without change to the rate of syncytial nuclear division.

    PubMed

    Ishikawa, Ryo; Ohnishi, Takayuki; Kinoshita, Yuki; Eiguchi, Mitsugu; Kurata, Nori; Kinoshita, Tetsu

    2011-03-01

    In angiosperms, interspecific crosses often display hybrid incompatibilities that are manifested as under-proliferation or over-proliferation of endosperm. Recent analyses using crosses between Arabidopsis thaliana and its related species with different ploidy levels have shown that interspecific hybridization causes delayed developmental transition and increased mitotic activity in the endosperm. In this study, we investigated endosperm development in interspecific crosses between diploid Oryza species. In a cross between female O. sativa and male O. punctata, we found that the hybrid endosperm was reduced in size and this cross was associated with precocious developmental transition. By contrast, the cross between O. sativa and O. longistaminata generated enlarged hybrid endosperm at the mid-point of seed development and this cross was associated with delayed developmental transition. Subsequently, the hybrid endosperm displayed a shriveled appearance at the seed maturation stage. We found that the accumulation of storage products and the expression patterns of several marker genes were also altered in the hybrid endosperm. By contrast, the rate of syncytial mitotic nuclear divisions was not significantly affected. The gene OsMADS87 showed a maternal origin-specific expression pattern in rice endosperm, in contrast to its Arabidopsis homologue PHERES1, which shows paternal origin-specific expression. OsMADS87 expression was decreased or increased depending on the type of developmental transition change in the hybrid rice endosperm. Our results indicate that one of the interspecies hybridization barriers in Oryza endosperm is mediated by precocious or delayed developmental alterations and de-regulation of OsMADS87, without change to the rate of syncytial mitotic nuclear division in the hybrid endosperm.

  13. Agglomerated oral dosage forms of artemisinin/β-cyclodextrin spray-dried primary microparticles showing increased dissolution rate and bioavailability.

    PubMed

    Balducci, Anna Giulia; Magosso, Enrico; Colombo, Gaia; Sonvico, Fabio; Khan, Nurzalina Abdul Karim; Yuen, Kah Hay; Bettini, Ruggero; Colombo, Paolo; Rossi, Alessandra

    2013-09-01

    Artemisinin, a poorly water-soluble antimalarial drug, presents a low and erratic bioavailability upon oral administration. The aim of this work was to study an agglomerated powder dosage form for oral administration of artemisinin based on the artemisinin/β-cyclodextrin primary microparticles. These primary microparticles were prepared by spray-drying a water-methanol solution of artemisinin/β-cyclodextrin. β-Cyclodextrin in spray-dried microparticles increased artemisinin water apparent solubility approximately sixfold. The thermal analysis evidenced a reduction in the enthalpy value associated with drug melting, due to the decrease in drug crystallinity. The latter was also evidenced by powder X-ray diffraction analysis, while (13)C-NMR analysis indicated the partial complexation with β-cyclodextrin. Agglomerates obtained by sieve vibration of spray-dried artemisinin/β-cyclodextrin primary microparticles exhibited free flowing and close packing properties compared with the non-flowing microparticulate powder. The in vitro dissolution rate determination of artemisinin from the agglomerates showed that in 10 min about 70% of drug was released from the agglomerates, whereas less than 10% of artemisinin was dissolved from raw material powder. Oral administration of agglomerates in rats yielded higher artemisinin plasma levels compared to those of pure drug. In the case of the agglomerated powder, a 3.2-fold increase in drug fraction absorbed was obtained.

  14. [Intraductal Papillary Mucinous Neoplasm (IPMN) of the Pancreas Showing High Accumulation of 18F-Fluorodeoxyglucose (FDG)--A Case Report].

    PubMed

    Kubota, Masaru; Nishimura, Masashige; Nakatsuka, Rie; Miyazaki, Susumu; Danno, Katsuki; Motoori, Masaaki; Matsuda, Chu; Fujitani, Kazumasa; Iwase, Kazuhiro

    2015-11-01

    The diagnosis of intraductal papillary mucinous neoplasms (IPMNs) of the pancreas includes radiographic (CT, MRI) and endoscopic evaluation (ERCP, EUS). The treatment strategy is outlined in the 2012 International Consensus Guidelines (ICG). Herein, we report a case initially not indicated for surgery. Four months after the initial diagnosis, the cystic lesion transformed into a solid mass-like lesion visible on CT. FDG-PET showed abnormal FDG uptake at the same location. Surgical resection was performed immediately, and the tumor was diagnosed as IPMN with inflammation. FDG-PET showed a false-positive diagnosis for the malignancy in this case of IPMN.

  15. Modern sediment characteristics and accumulation rates from the delta front to prodelta of the Yellow River (Huanghe)

    NASA Astrophysics Data System (ADS)

    Zhou, Liangyong; Liu, Jian; Saito, Yoshiki; Gao, Maosheng; Diao, Shaobo; Qiu, Jiandong; Pei, Shaofeng

    2016-08-01

    Since 1976, the main channel of the Yellow River (Huanghe) has been on the east side of the delta complex, and the river has prograded a broad new delta lobe in Laizhou Bay of the Bohai Sea. In 2012, extensive bathymetric and high-resolution seismic profiles were conducted and sediment cores were collected off the new delta lobe. This study examined delta sedimentation and morphology along a profile across the modern subaqueous Yellow River delta and into Laizhou Bay, by analyzing sediment radionuclides (137Cs, 210Pb and 7Be), sedimentary structure, grain-size composition, organic carbon content, and morphological changes between 1976 and 2012. The change in the bathymetric profile, longitudinal to the river's course, reveals subaqueous delta progradation during this period. The subbottom boundary between the new delta lobe sediment and the older seafloor sediment (before the 1976 course shift) was identified in terms of lithology and radionuclide distributions, and recognized as a downlap surface in the seismic record. The accumulation rate of the new delta lobe sediment is estimated to be 5-18.6 cm year-1 on the delta front slope, 2 cm year-1 at the toe of the slope, and 1-2 cm year-1 in the shelf areas of Laizhou Bay. Sediment facies also change offshore, from alternations of gray and brown sediment in the proximal area to gray bioturbated fine sediment in the distal area. Based on 7Be distribution, the shorter-term deposition rate was at least 20 cm year-1 in the delta front.

  16. Export production fluctuations in the eastern equatorial Pacific during the Pliocene-Pleistocene: Reconstruction using barite accumulation rates

    NASA Astrophysics Data System (ADS)

    Ma, Zhongwu; Ravelo, Ana Christina; Liu, Zhonghui; Zhou, Liping; Paytan, Adina

    2015-11-01

    Export production is an important component of the carbon cycle, modulating the climate system by transferring CO2 from the atmosphere to the deep ocean via the biological pump. Here we use barite accumulation rates to reconstruct export production in the eastern equatorial Pacific over the past 4.3 Ma. We find that export production fluctuated considerably on multiple time scales. Export production was on average higher (51 g C m-2 yr-1) during the Pliocene than the Pleistocene (40 g C m-2 yr-1), decreasing between 3 and 1 Ma (from more than 60 to 20 g C m-2 yr-1) followed by an increase over the last million years. These trends likely reflect basin-scale changes in nutrient inventory and ocean circulation. Our record reveals decoupling between export production and temperatures on these long (million years) time scale. On orbital time scales, export production was generally higher during cold periods (glacial maxima) between 4.3 and 1.1 Ma. This could be due to stronger wind stress and higher upwelling rates during glacial periods. A shift in the timing of maximum export production to deglaciations is seen in the last ~1.1 million years. Results from this study suggest that, in the eastern equatorial Pacific, mechanisms that affect nutrient supply and/or ecosystem structure and in turn carbon export on orbital time scales differ from those operating on longer time scales and that processes linking export production and climate-modulated oceanic conditions changed about 1.1 million years ago. These observations should be accounted for in climate models to ensure better predictions of future climate change.

  17. Mauna Loa lava accumulation rates at the Hilo drill site: Formation of lava deltas during a period of declining overall volcanic growth

    USGS Publications Warehouse

    Lipman, P.W.; Moore, J.G.

    1996-01-01

    Accumulation rates for lava flows erupted from Mauna Loa, as sampled in the uppermost 280 m of the Hilo drill hole, vary widely for short time intervals (several thousand years), but overall are broadly similar to those documented elsewhere on this volcano since 100 ka. Thickness variations and accumulation rates for Mauna Loa lavas at the Hilo drill site have been strongly affected by local paleotopography, including funneling and ponding between Mauna Kea and Kilauea. In addition, gentle submerged slopes of Mauna Kea in Hilo Bay have permitted large shoreline displacements by Mauna Loa flows. Ages of eruptive intervals have been determined from published isotopic data and from eustatic sea level curves modified to include the isostatic subsidence of the island of Hawaii at 2.2-2.6 mm/yr. Prior to 10 ka, rates of Mauna Loa lava accumulation at the drill site varied from 0.6 to 4.3 mm/yr for dateable intervals, with an overall rate of 1.8 mm/yr. Major eruptive pulses at about 1.3 and 10 ka, each probably representing a single long-lived eruption based on lack of weathering between flow units, increase the overall accumulation rate to 2.4 mm/yr. The higher rate since 10 ka reflects construction of thick near-shoreline lava deltas as postglacial sea levels rose rapidly. Large lava deltas form only along coastal segments where initially subaerial slopes have been submerged by the combined effects of eustatic sea level rise, isostatic subsidence, or spreading of volcano flanks. Overall accumulation of 239 m of lava at the drill site since 100-120 ka closely balances submergence of the Hilo area, suggesting that processes of coastal lava deposition have been modulated by rise in sea level. The Hilo accumulation rate is slightly higher than average rates of 1-2 mm/yr determined elsewhere along the Mauna Loa coast, based on rates of shoreline coverage and dated sea cliff and fault scarp exposures. Low rates of coastal lava accumulation since 100 ka, near or below the rate

  18. Forest dynamics and tip-up pools drive pulses of high carbon accumulation rates in a tropical peat dome in Borneo (Southeast Asia)

    NASA Astrophysics Data System (ADS)

    Dommain, René; Cobb, Alexander R.; Joosten, Hans; Glaser, Paul H.; Chua, Amy F. L.; Gandois, Laure; Kai, Fuu-Ming; Noren, Anders; Salim, Kamariah A.; Su'ut, N. Salihah H.; Harvey, Charles F.

    2015-04-01

    Peatlands of Southeast Asia store large pools of carbon but the mechanisms of peat accumulation in tropical forests remain to be resolved. Patch dynamics and forest disturbance have seldom been considered as drivers that can amplify or dampen rates of peat accumulation. Here we used a modified piston corer, noninvasive geophysical measurements, and geochemical and paleobotanical techniques to establish the effect of tree fall on carbon accumulation rates in a peat swamp forest dominated by Shorea albida in Brunei (Borneo). Carbon initially accumulated in a mangrove forest at over 300 g C m-2 yr-1 but declined to less than 50 g C m-2 yr-1 with the establishment of a peat swamp forest. A rapid accumulation pulse of 720-960 g C m-2 yr-1 occurred around 1080 years ago as a tip-up pool infilled. Tip-up pools are common in the peatlands of northwest Borneo where windthrow and lightning strikes produce tree falls at a rate of 4 trees ha-1 every decade. A simulation model indicates that tip-up pools, which are formed across the entire forested peat dome, produce local discontinuities in the peat deposit, when peat is removed to create a pool that is rapidly filled with younger material. The resulting discontinuities in peat age at the base and sides of pool deposits obscure linkages between carbon accumulation rates and climate and require new approaches for paleoenvironmental reconstructions. Our results suggest that carbon accumulation in tropical peat swamps may be based on fundamentally different peat-forming processes than those of northern peatlands.

  19. Genotype and growing environment interaction shows a positive correlation between substrates of raffinose family oligosaccharides (RFO) biosynthesis and their accumulation in chickpea ( Cicer arietinum L.) seeds.

    PubMed

    Gangola, Manu P; Khedikar, Yogendra P; Gaur, Pooran M; Båga, Monica; Chibbar, Ravindra N

    2013-05-22

    To develop genetic improvement strategies to modulate raffinose family oligosaccharides (RFO) concentration in chickpea ( Cicer arietinum L.) seeds, RFO and their precursor concentrations were analyzed in 171 chickpea genotypes from diverse geographical origins. The genotypes were grown in replicated trials over two years in the field (Patancheru, India) and in the greenhouse (Saskatoon, Canada). Analysis of variance revealed a significant impact of genotype, environment, and their interaction on RFO concentration in chickpea seeds. Total RFO concentration ranged from 1.58 to 5.31 mmol/100 g and from 2.11 to 5.83 mmol/100 g in desi and kabuli genotypes, respectively. Sucrose (0.60-3.59 g/100 g) and stachyose (0.18-2.38 g/100 g) were distinguished as the major soluble sugar and RFO, respectively. Correlation analysis revealed a significant positive correlation between substrate and product concentration in RFO biosynthesis. In chickpea seeds, raffinose, stachyose, and verbascose showed a moderate broad sense heritability (0.25-0.56), suggesting the use of a multilocation trials based approach in chickpea seed quality improvement programs.

  20. Influence of the rate of ethanol production and accumulation on the viability of Saccharomyces cerevisiae in "rapid fermentation".

    PubMed

    Nagodawithana, T W; Steinkraus, K H

    1976-02-01

    Whereas "rapid fermentation" of diluted clover honey (25 degrees Brix) fortified with yeast nutrients using 8 X 10(8) brewers' yeast cells per ml resulted in an ethanol content of 9.5% (wt/vol; 12% vol/vol) in 3 h at 30 C, death rate of the yeast cells during this period was essentially logarithmic. Whereas 6 h was required to reach the same ethanol content at 15 C, the yeast cells retained their viability. Using a lower cell population (6 X 10(7) cells/ml), a level at which the fermentation was no longer "rapid," the yeast cells also retained their viability at 30 C. Ethanol added to the medium was much less lethal than the same or less quantities of ethanol produced by the cell in "rapid fermentation." It was considered possible that ethanol was produced so rapidly at 30 C that it could not diffuse out of the cell as rapidly as it was formed. The hypothesis was postulated that ethanol accumulating in the cell was contributing to the high death rate at 30 C. It was found that the intracellular ethanol concentration reached a level of approximately 2 X 10(11) ethanol molecules/cell in the first 30 min of fermentation at 30 C. At 15 C, with the same cell count, intracellular ethanol concentration reached a level of approximately 4 X 10(10) ethanol molecules/cell and viability remained high. Also, at 30 C with a lower cell population (6 X 10(7) cells/ml), under which conditions fermentation was no longer "rapid," intracellular ethanol concentration reached a similar level (4 X 10(10) molecules ethanol/cell) and the cells retained their viability. Alcohol dehydrogenase (ADH) lost its activity in brewers' yeast under conditions of "rapid fermentation" at 30 C but retained its activity in cells under similar conditions at 15 C. ADH activity was also retained in fermentations at 30 C with cell populations of 6 X 10(7)/ml. It would appear that an intracellular level of about 5 X 10(10) ethanol molecules/cell is normal and that this level does not damage either cell

  1. A trend analysis of breast cancer incidence rates in the United States from 2000 to 2009 shows a recent increase.

    PubMed

    Hou, Ningqi; Huo, Dezheng

    2013-04-01

    Recent reports have shown that the breast cancer incidence rate in the US stabilized after a sharp reduction in 2002 and 2003. It is important to continue monitoring breast cancer incidence rates according to age group, race/ethnicity, estrogen receptor (ER) status, and tumor stage. Age-standardized breast cancer incidence rates were calculated using data from the surveillance, epidemiology, and end results 18 registries from 2000 to 2009, for 677,774 female breast cancer patients aged 20 and above. Jointpoint regression models were used to fit a series of joined straight lines on a log scale to annual age-standardized rates. The incidence rates of all breast cancer significantly increased for non-Hispanic blacks from 2005 to 2009 (annual percentage change, APC = 2.0 %, p = 0.01) and Asian/Pacific Islanders from 2000 to 2009 (APC = 1.2 %, p = 0.02). Since 2004, incidence rates in women aged 40-49 years significantly increased for most racial/ethnic groups (overall APC = 1.1 %, p = 0.001). The incidence rate of carcinoma in situ significantly increased in all racial/ethnic groups, with an APC range from 2.3 to 3.0 % (p < 0.005). The localized breast cancer incidence significantly increased in non-Hispanic blacks (APC = 1.3 %, p = 0.004) and Asians (APC = 1.2 %, p = 0.03). ER-positive breast cancer significantly increased in almost all age/race sub-groups after 2005 (APC by race: non-Hispanic whites 1.5 %, non-Hispanic blacks 4.3 %, Asian/Pacific Islanders 1.7 %, and Hispanics 1.8 %; all p values <0.05), while ER-negative breast cancer decreased in most sub-groups (APC by race: non-Hispanic whites-3.9 %, non-Hispanic blacks-3.7 %, Asian/Pacific Islanders-1.5 %, and Hispanics-4.3 %; all p values <0.05). Recently the incidence of breast cancer appears to be increasing in certain subgroups, including ER-positive, early-stage breast cancers, in particular among non-Hispanic blacks and Asian/Pacific Islanders. Further studies are

  2. Water filtration rate and infiltration/accumulation of low density lipoproteins in 3 different modes of endothelial/smooth muscle cell co-cultures.

    PubMed

    Ding, ZuFeng; Fan, YuBo; Deng, XiaoYan

    2009-11-01

    Using different endothelial/smooth muscle cell co-culture modes to simulate the intimal structure of blood vessels, the water filtration rate and the infiltration/accumulation of LDL of the cultured cell layers were studied. The three cell culture modes of the study were: (i) The endothelial cell monolayer (EC/Phi); (ii) endothelial cells directly co-cultured on the smooth muscle cell monolayer (EC-SMC); (iii) endothelial cells and smooth muscle cells cultured on different sides of a Millicell-CM membrane (EC/SMC). It was found that under the same condition, the water filtration rate was the lowest for the EC/SMC mode and the highest for the EC/Phi mode, while the infiltration/accumulation of DiI-LDLs was the lowest in the EC/Phi mode and the highest in the EC-SMC mode. It was also found that DiI-LDL infiltration/accumulation in the cultured cell layers increased with the increasing water filtration rate. The results from the in vitro model study therefore suggest that the infiltration/accumulation of the lipids within the arterial wall is positively correlated with concentration polarization of atherogenic lipids, and the integrity of the endothelium plays an important role in the penetration and accumulation of atherogenic lipids in blood vessel walls.

  3. Map showing coastal cliff retreat rates along the Big Sur coast, Monterey and San Luis Obispo Counties, California

    USGS Publications Warehouse

    Hapke, Cheryl J.; Green, Krystal R.

    2004-01-01

    The average coastal cliff retreat rate along the Big Sur coast is 18 ? 6 cm/yr as measured over a 52-year time period. The erosion reference features measured as the cliff edge include the well-defined cliff edges common to marine terraces, slight breaks in the slope defining the upper edge of the active lower slope, and the road grade. Cliff erosion and retreat are focused in isolated erosion hotspots that account for most of the calculated average retreat.

  4. Rates of post-fire vegetation recovery and fuel accumulation as a function of burn severity and time-since-burn in four western U.S. ecosystems

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Vegetation recovery and fuel accumulation rates following wildfire are useful measures of ecosystem resilience, yet few studies have quantified these variables over 10 years post-fire. Conventional wisdom is that recovery time to pre-fire condition will be slower as a function of burn severity, as i...

  5. Late Quaternary sediment-accumulation rates within the inner basins of the California Continental Borderland in support of geologic hazard evaluation

    USGS Publications Warehouse

    Normark, W.R.; McGann, M.; Sliter, R.W.

    2009-01-01

    An evaluation of the geologic hazards of the inner California Borderland requires determination of the timing for faulting and mass-movement episodes during the Holocene. Our effort focused on basin slopes and turbidite systems on the basin floors for the area between Santa Barbara and San Diego, California. Dating condensed sections on slopes adjacent to fault zones provides better control on fault history where high-resolution, seismic-reflection data can be used to correlate sediment between the core site and the fault zones. This study reports and interprets 147 radiocarbon dates from 43 U.S. Geological Survey piston cores as well as 11 dates from Ocean Drilling Program Site 1015 on the floor of Santa Monica Basin. One hundred nineteen dates from 39 of the piston cores have not previously been published. Core locations were selected for hazard evaluation, but despite the nonuniform distribution of sample locations, the dates obtained for the late Quaternary deposits are useful for documenting changes in sediment-accumulation rates during the past 30 ka. Cores from basins receiving substantial sediment from rivers, i.e., Santa Monica Basin and the Gulf of Santa Catalina, show a decrease in sediment supply during the middle Holocene, but during the late Holocene after sea level had reached the current highstand condition, rates then increased partly in response to an increase in El Ni??o-Southern Oscillation events during the past 3.5 ka. ?? 2009 The Geological Society of America.

  6. Crack users show high rates of antisocial personality disorder, engagement in illegal activities and other psychosocial problems.

    PubMed

    Paim Kessler, Felix Henrique; Barbosa Terra, Mauro; Faller, Sibele; Ravy Stolf, Anderson; Carolina Peuker, Ana; Benzano, Daniela; Pechansky, Flavio

    2012-01-01

    The aim of this study was to compare three groups of Brazilian psychoactive substance (PAS) abuse patients (crack cocaine users, cocaine snorters, and non-cocaine PAS users) in terms of psychiatric comorbidities and severity of psychosocial problems. A cross-sectional, multi-center study was conducted at five Brazilian research centers. A total of 738 current PAS abusers seeking specialized treatment (outpatient and inpatient clinics) were assessed using the sixth version of the Addiction Severity Index (ASI-6): 293 patients using crack cocaine were compared with 126 using powder cocaine and 319 using non-cocaine PAS (mostly alcohol and marijuana). Psychiatric comorbidities were assessed in a smaller sample (290 cases), originating from three of the centers, using the Mini International Neuropsychiatric Interview Plus (MINI-Plus). Crack and powder cocaine users were significantly younger than non-cocaine PAS users (31.1 ± 8.1 and 32.9 ± 8.8 vs. 42.4 ± 12, respectively; p < .001). Crack users presented a higher rate of antisocial personality disorder (25%) than powder cocaine (9%) and non-cocaine PAS users (9%), even when adjusted for confounding factors (Pr = 2.6; 95% CI 1.10-6.40). According to ASI-6 summary scores, crack users presented a significantly higher rate of occupational, family, and legal problems and reported more illegal and violent activities such as burglary and theft (23%) and threatening or assaulting (32%) than non-cocaine PAS users. Our findings, combined with the recent increase observed in the prevalence of crack use in Brazil, highlight the severity of psychiatric symptoms and psychosocial problems related to this powerful drug and corroborate the already suggested association between crack/cocaine, violence, and legal problems. Treatment programs for crack users should routinely consider the possibility of associated psychiatric comorbidities, such as antisocial personality disorder, which may affect treatment outcomes.

  7. A 9000 year perspective on carbon accumulation rates under changing hydro-climate and vegetation conditions in a mountain peatland, northern Carpathians, Romania

    NASA Astrophysics Data System (ADS)

    Feurdean, Angelica; Panait, Andrei; Gałka, Mariusz; Diaconu, Andrei; Hutchinson, Simon; Mulch, Andreas; Tantau, Ioan; Hickler, Thomas

    2016-04-01

    Peatlands, in particular ombrogenous bogs, which entirely depend on water from precipitation, are sensitive to changes in the balance between precipitation and evapotranspiration; and therefore highly suitable for hydro-climatological reconstruction. Peatlands also represent a large carbon pool in the terrestrial biosphere. However, little is known about the C sequestration processes in mountain peatlands under various competing drivers of change (climate, vegetation, fire). We applied a multi-proxy approach (bulk density, loss on ignition, total organic carbon, testate amoebae, δ13C in Sphagnum, plant macrofossils, pollen and charcoal) to a peat sequence from a mountain ombrogenous bog (Tǎul Muced) to explore how changes in hydro-climate conditions, peat plant composition and fire have affected long-term physical peat properties and the rate of carbon accumulation over the last 9000 years. Carbon accumulation at this site ranged from 7 to 105 g C cm2 yr1 (mean 23 ± 14 g C cm2 yr_1). We found that high moisture availability (P-E) as inferred from testate amoebae and δ13C values in Sphagnum increased the carbon sink capacity of peatland. The strength of the relationship between the rate of carbon accumulation and climate appears particularly evident over the last millennium when high C accumulation rates correlated with the warm and wet conditions of the Medieval Climate Anomaly and lower C accumulation rates with the dry conditions of the Little Ice Age. We also found a significant positive correlation between the rate of C accumulation and changes in vegetation; rates were lowest (17 g C cm2 yr_1), during periods of mixed Sphagnum (primarily S. magellanicum and S. angustifolium) and vascular plant (Cyperaceae, Eriophorum vaginatum) growth and increased (31 g C cm2 yr_1) during the accumulation of Sphagnum peat, regardless the dominant Sphagnum species. We did not find indication of peatland fire during the investigated interval. Our study represents one of the

  8. Severe Septic Patients with Mitochondrial DNA Haplogroup JT Show Higher Survival Rates: A Prospective, Multicenter, Observational Study

    PubMed Central

    Martín, María M.; López-Gallardo, Esther; Solé-Violán, Jordi; Blanquer, José; Labarta, Lorenzo; Díaz, César; Borreguero-León, Juan María; Jiménez, Alejandro; Montoya, Julio; Ruiz-Pesini, Eduardo

    2013-01-01

    Objective In a previous cohort study (n=96), we found an association between mitochondrial (mt) DNA haplogroup JT and increased survival of severe septic patients, after controlling for age and serum lactic acid levels. The aim of this research was to increase the predictive accuracy and to control for more confounder variables in a larger cohort (n=196) of severe septic patients, to confirm whether mtDNA haplogroup JT influences short and medium-term survival in these patients. Methods We conducted a prospective, multicenter, observational study in six Spanish Intensive Care Units. We determined 30-day and 6-month survival and mtDNA haplogroup in this second cohort of 196 patients and in the global cohort (first and second cohorts combined) with 292 severe septic patients. Multiple logistic regression and Cox regression analyses were used to test for the association of mtDNA haplogroups JT with survival at 30-days and 6-months, controlling for age, sex, serum interleukin-6 levels and SOFA score. Results Logistic and Cox regression analyses showed no differences in 30-day and 6-month survival between patients with mtDNA haplogroup JT and other haplogroups in the first cohort (n=96). In the second cohort (n=196), these analyses showed a trend to higher 30-day and 6-month survival in those with haplogroup JT. In the global cohort (n=292), logistic and Cox regression analyses showed higher 30-day and 6-month survival for haplogroup JT. There were no significant differences between J and T sub-haplogroups in 30-day and 6-month survival. Conclusions The global cohort study (first and second cohorts combined), the largest to date reporting on mtDNA haplogroups in septic patients, confirmed that haplogroup JT patients showed increased 30-day and 6-month survival. This finding may be due to single nucleotide polymorphism defining the whole haplogroup JT and not separately for J or T sub-haplogroups. PMID:24069186

  9. High-resolution deep Northeast Pacific radiocarbon record shows little change in ventilation rate during the last deglaciation

    NASA Astrophysics Data System (ADS)

    Lund, D. C.; Mix, A. C.

    2010-12-01

    The rise in atmospheric carbon dioxide during the last deglaciation is thought to be driven by release of carbon sequestered in the abyssal ocean. This mechanism requires a poorly ventilated deep Pacific during the Last Glacial Maximum (LGM) and enhanced ventilation during the deglaciation. Here we evaluate the plausibility of this scenario using planktonic and benthic foraminiferal radiocarbon data from a high-sedimentation rate core (~25 cm/kyr) collected in the deep (2700 m) Northeast Pacific. We estimate that the mean benthic-planktonic (B-P) age was 1620±190 years during the LGM (n=10 pairs). This value is indistinguishable from the mean B-P difference for the deglaciation (1500±230; n=20 pairs) and the difference between surface and deep water 14C ages today (1560±70 years). Furthermore, our time series of benthic Δ14C parallels atmospheric Δ14C with an offset of 300±50‰ from 22 to 10 kyr BP. These data suggest the ventilation rate of the deep NE Pacific remained nearly constant during the deglaciation, consistent with lower resolution data from this region (Okazaki et al., 2010). Between 22 and 16 kyr BP, Δ14C in the deep NE Pacific varied between 0 and 100‰, well above the -200‰ values estimated at intermediate depths off of Baja California during the Mystery Interval (Marchitto et al., 2007). The deep NE Pacific apparently did not contain water of adequate age to source deglacial Δ14C anomalies shallower in the water column. Given that Antarctic Intermediate Water is also an unlikely source (de Pol-Holz et al., 2010; Rose et al., 2010), an alternative explanation is necessary for the extreme 14C depletions in the eastern tropical Pacific. De Pol-Holz, R. D., et al. 2010. No signature of abyssal carbon in intermediate waters off Chile during deglaciation. Nature Geoscience 3, 192-195. Marchitto, T., Lehman, S., Ortiz, J., Fluckiger, J. & van Geen, A. 2007. Marine radiocarbon evidence for the mechanism of deglacial atmospheric CO2 rise. Science

  10. The dipeptide H-Trp-Glu-OH (WE) shows agonistic activity to peroxisome proliferator-activated protein-α and reduces hepatic lipid accumulation in lipid-loaded H4IIE cells.

    PubMed

    Jia, Yaoyao; Kim, Jong-Ho; Nam, Bora; Kim, Jiyoung; Lee, Ji Hae; Hwang, Kwang-Yeon; Lee, Sung-Joon

    2014-07-01

    Dipeptides digested from dietary proteins can be directly absorbed by the intestine and delivered to the circulatory system. However, the dipeptides' metabolic roles and biological activities are largely unknown. Lipid-loaded HII4E cells stimulated with H-Trp-Glu-OH (WE) exhibited reduced lipid accumulation, of which the effect was abolished by peroxisome proliferator-activated receptor (PPAR) α gene knock down. A luciferase assay showed that the WE dipeptide induced PPARα transactivation in a dose-dependent manner. Surface plasmon resonance and time-resolved fluorescence resonance energy transfer analyses demonstrated that WE interacts directly with the PPARα ligand binding domain (KD, 120 μM; EC50, 83 μM). Cells stimulated with WE induced PPARα and its responsive genes and increased cellular fatty acid uptake. In conclusion, WE reduces hepatic lipid accumulation in lipid-loaded hepatocytes via the activation of PPARα by a direct interaction.

  11. Elucidating effects of atmospheric deposition and peat decomposition processes on mercury accumulation rates in a northern Minnesota peatland over last 10,000 cal years

    NASA Astrophysics Data System (ADS)

    Nater, E. A.; Furman, O.; Toner, B. M.; Sebestyen, S. D.; Tfaily, M. M.; Chanton, J.; Fissore, C.; McFarlane, K. J.; Hanson, P. J.; Iversen, C. M.; Kolka, R. K.

    2014-12-01

    Climate change has the potential to affect mercury (Hg), sulfur (S) and carbon (C) stores and cycling in northern peatland ecosystems (NPEs). SPRUCE (Spruce and Peatland Responses Under Climate and Environmental change) is an interdisciplinary study of the effects of elevated temperature and CO2 enrichment on NPEs. Peat cores (0-3.0 m) were collected from 16 large plots located on the S1 peatland (an ombrotrophic bog treed with Picea mariana and Larix laricina) in August, 2012 for baseline characterization before the experiment begins. Peat samples were analyzed at depth increments for total Hg, bulk density, humification indices, and elemental composition. Net Hg accumulation rates over the last 10,000 years were derived from Hg concentrations and peat accumulation rates based on peat depth chronology established using 14C and 13C dating of peat cores. Historic Hg deposition rates are being modeled from pre-industrial deposition rates in S1 scaled by regional lake sediment records. Effects of peatland processes and factors (hydrology, decomposition, redox chemistry, vegetative changes, microtopography) on the biogeochemistry of Hg, S, and other elements are being assessed by comparing observed elemental depth profiles with accumulation profiles predicted solely from atmospheric deposition. We are using principal component analyses and cluster analyses to elucidate relationships between humification indices, peat physical properties, and inorganic and organic geochemistry data to interpret the main processes controlling net Hg accumulation and elemental concentrations in surface and subsurface peat layers. These findings are critical to predicting how climate change will affect future accumulation of Hg as well as existing Hg stores in NPE, and for providing reference baselines for SPRUCE future investigations.

  12. Three hen strains fed photoisomerized trans,trans CLA-rich soy oil exhibit different yolk accumulation rates and source-specific isomer deposition.

    PubMed

    Shinn, Sara E; Gilley, Alex D; Proctor, Andrew; Anthony, Nicholas B

    2015-04-01

    Most CLA chicken feeding trials used cis,trans (c,t) and trans,cis (t,c) CLA isomers to produce CLA-rich eggs, while reports of trans,trans (t,t) CLA enrichment in egg yolks are limited. The CLA yolk fatty acid profile changes and the 10-12 days of feeding needed for maximum CLA are well documented, but there is no information describing CLA accumulation during initial feed administration. In addition, no information on CLA accumulation rates in different hen strains is available. The aim of this study was to determine a mathematical model that described yolk CLA accumulation and depletion in three hen strains by using t,t CLA-rich soybean oil produced by photoisomerization. Diets of 30-week Leghorns, broilers, and jungle fowl were supplemented with 15% CLA-rich soy oil for 16 days, and eggs were collected for 32 days. Yolk fatty acid profiles were measured by GC-FID. CLA accumulation and depletion was modeled by both quadratic and piecewise regression analysis. A strong quadratic model was proposed, but it was not as effective as piecewise regression in describing CLA accumulation and depletion. Broiler hen eggs contained the greatest concentration of CLA at 3.2 mol/100 g egg yolk, then jungle fowl at 2.9 mol CLA, and Leghorns at 2.3 mol CLA. The t,t CLA isomer levels remained at 55% of total yolk CLA during CLA feeding. However, t-10,c-12 (t,c) CLA concentration increased slightly during CLA accumulation and was significantly greater than c-9,t-11 CLA. Jungle fowl had the smallest increase in yolk saturated fat with CLA yolk accumulation.

  13. Comparison of annual accumulation rates derived from in situ and ground penetrating radar methods across Alaskan glaciers

    NASA Astrophysics Data System (ADS)

    McGrath, D.; Gusmeroli, A.; Oneel, S.; Sass, L. C.; Arendt, A. A.; Wolken, G. J.; Kienholz, C.; McNeil, C.

    2013-12-01

    Constraining annual snowfall accumulation in mountain glacier environments is essential for determining the annual mass balance of individual glaciers and predicting seasonal meltwater runoff to river and marine ecosystems. However, large spatial and elevation gradients, coupled with sparse point measurements preclude accurate quantification of this variable using traditional methods. Here, we report on an extensive field campaign conducted in March-May 2013 on key benchmark glaciers in Alaska, including Taku Glacier near Juneau, Scott Glacier near Cordova, both Eklutna and Wolverine Glacier near Anchorage and Gulkana Glacier in the interior Alaska Range. Over 50 km of 500 MHz common-offset ground penetrating radar (GPR) surveys were collected on each glacier, with an emphasis on capturing spatial variability in the accumulation zone. Frequent in situ observations were collected for comparison with the GPR, including probe depths, snow pits and shallow firn cores (~8 m). We report on spatial and elevation gradients across this suite of glaciers and across numerous climatic zones and discuss differences between GPR and in situ derived annual accumulation estimates. This comparison is an essential first step in order to effectively evaluate regional atmospheric re-analysis products.

  14. Germline mutation rates and the long-term phenotypic effects of mutation accumulation in wild-type laboratory mice and mutator mice

    PubMed Central

    Uchimura, Arikuni; Higuchi, Mayumi; Minakuchi, Yohei; Ohno, Mizuki; Toyoda, Atsushi; Fujiyama, Asao; Miura, Ikuo; Wakana, Shigeharu; Nishino, Jo; Yagi, Takeshi

    2015-01-01

    The germline mutation rate is an important parameter that affects the amount of genetic variation and the rate of evolution. However, neither the rate of germline mutations in laboratory mice nor the biological significance of the mutation rate in mammalian populations is clear. Here we studied genome-wide mutation rates and the long-term effects of mutation accumulation on phenotype in more than 20 generations of wild-type C57BL/6 mice and mutator mice, which have high DNA replication error rates. We estimated the base-substitution mutation rate to be 5.4 × 10−9 (95% confidence interval = 4.6 × 10−9–6.5 × 10−9) per nucleotide per generation in C57BL/6 laboratory mice, about half the rate reported in humans. The mutation rate in mutator mice was 17 times that in wild-type mice. Abnormal phenotypes were 4.1-fold more frequent in the mutator lines than in the wild-type lines. After several generations, the mutator mice reproduced at substantially lower rates than the controls, exhibiting low pregnancy rates, lower survival rates, and smaller litter sizes, and many of the breeding lines died out. These results provide fundamental information about mouse genetics and reveal the impact of germline mutation rates on phenotypes in a mammalian population. PMID:26129709

  15. Germline mutation rates and the long-term phenotypic effects of mutation accumulation in wild-type laboratory mice and mutator mice.

    PubMed

    Uchimura, Arikuni; Higuchi, Mayumi; Minakuchi, Yohei; Ohno, Mizuki; Toyoda, Atsushi; Fujiyama, Asao; Miura, Ikuo; Wakana, Shigeharu; Nishino, Jo; Yagi, Takeshi

    2015-08-01

    The germline mutation rate is an important parameter that affects the amount of genetic variation and the rate of evolution. However, neither the rate of germline mutations in laboratory mice nor the biological significance of the mutation rate in mammalian populations is clear. Here we studied genome-wide mutation rates and the long-term effects of mutation accumulation on phenotype in more than 20 generations of wild-type C57BL/6 mice and mutator mice, which have high DNA replication error rates. We estimated the base-substitution mutation rate to be 5.4 × 10(-9) (95% confidence interval = 4.6 × 10(-9)-6.5 × 10(-9)) per nucleotide per generation in C57BL/6 laboratory mice, about half the rate reported in humans. The mutation rate in mutator mice was 17 times that in wild-type mice. Abnormal phenotypes were 4.1-fold more frequent in the mutator lines than in the wild-type lines. After several generations, the mutator mice reproduced at substantially lower rates than the controls, exhibiting low pregnancy rates, lower survival rates, and smaller litter sizes, and many of the breeding lines died out. These results provide fundamental information about mouse genetics and reveal the impact of germline mutation rates on phenotypes in a mammalian population.

  16. Significant relationships among frost tolerance and net photosynthetic rate, water use efficiency and dehydrin accumulation in cold-treated winter oilseed rapes.

    PubMed

    Urban, Milan Oldřich; Klíma, Miroslav; Vítámvás, Pavel; Vašek, Jakub; Hilgert-Delgado, Alois Albert; Kučera, Vratislav

    2013-12-15

    Five winter oilseed rape cultivars (Benefit, Californium, Cortes, Ladoga, Navajo) were subjected to 30 days of cold treatment (4 °C) to examine the effect of cold on acquired frost tolerance (FT), dehydrin (DHN) content, and photosynthesis-related parameters. The main aim of this study was to determine whether there are relationships between FT (expressed as LT50 values) and the other parameters measured in the cultivars. While the cultivar Benefit accumulated two types of DHNs (D45 and D35), the other cultivars accumulated three additional DHNs (D97, D47, and D37). The similar-sized DHNs (D45 and D47) were the most abundant; the others exhibited significantly lower accumulations. The highest correlations were detected between LT50 and DHN accumulation (r=-0.815), intrinsic water use efficiency (WUEi; r=-0.643), net photosynthetic rate (r=-0.628), stomatal conductance (r=0.511), and intracellular/intercellular CO2 concentration (r=0.505). Those cultivars that exhibited higher Pn rate in cold (and further a significant increase in WUEi) had higher levels of DHNs and also higher FT. No significant correlation was observed between LT50 and E, PRI, or NDVI. Overall, we have shown the selected physiological parameters to be able to distinguish different FT cultivars of winter oilseed rape.

  17. Sediment accumulation rates and high-resolution stratigraphy of recent fluvial suspension deposits in various fluvial settings, Morava River catchment area, Czech Republic

    NASA Astrophysics Data System (ADS)

    Sedláček, Jan; Bábek, Ondřej; Kielar, Ondřej

    2016-02-01

    We present a comprehensive study concerning sedimentary processes in fluvial sediment traps within the Morava River catchment area (Czech Republic) involving three dammed reservoirs, four meanders and oxbow lakes, and several natural floodplain sites. The objective of the study was to determine sediment accumulation rates (SAR), estimate erosion rates, calculating these using a combination of the 137Cs method and historical data. Another purpose of this study was to provide insight into changing erosion and accumulation rates over the last century. Extensive water course modifications were carried out in the Morava River catchment area during the twentieth century, which likely affected sedimentation rates along the river course. Other multiproxy stratigraphic methods (X-ray densitometry, magnetic susceptibility, and visible-light reflectance spectrometry) were applied to obtain additional information about sediment infill. Sediment stratigraphy revealed distinct distal-to-proximal patterns, especially in reservoirs. Granulometrically, silts and sandy silts prevailed in sediments. Oxbow lakes and meanders contained larger amounts of clay and organic matter, which is the main difference between them and reservoirs. Pronounced 137Cs peaks were recorded in all studied cores (maximum 377 Bq·kg- 1), thus indicating Chernobyl fallout from 1986 or older events. Calculated sediment accumulation rates were lowest in distal parts of reservoirs (0.13-0.58 cm/y) and floodplains (0.45-0.88 cm/y), moderately high rates were found in proximal parts of reservoirs and oxbow lakes (2.27-4.4 cm/y), and the highest rates in some oxbow lakes located near the river (6-8 cm/y). The frequency of the inundation still can be high in some natural areas as in the Litovelské Pomoraví protected area, whereas the decreasing frequency of the inundation in other modified parts can contribute to a lower sedimentation rate. The local effects such as difference between SARs in oxbow lakes and

  18. Increasing sediment accumulation rates in La Fonera (Palamós) submarine canyon axis and their relationship with bottom trawling activities

    NASA Astrophysics Data System (ADS)

    Puig, P.; Martín, J.; Masqué, P.; Palanques, A.

    2015-10-01

    Previous studies conducted in La Fonera (Palamós) submarine canyon (NW Mediterranean) found that trawling activities along the canyon flanks cause resuspension and transport of sediments toward the canyon axis. 210Pb chronology supported by 137Cs dating applied to a sediment core collected at 1750 m in 2002 suggested a doubling of the sediment accumulation rate since the 1970s, coincident with the rapid industrialization of the local trawling fleet. The same canyon area has been revisited a decade later, and new data are consistent with a sedimentary regime shift during the 1970s and also suggest that the accumulation rate during the last decade could be greater than expected, approaching ~2.4 cm yr-1 (compared to ~0.25 cm yr-1 pre-1970s). These results support the hypothesis that commercial bottom trawling can substantially affect sediment dynamics and budgets on continental margins, eventually initiating the formation of anthropogenic depocenters in submarine canyon environments.

  19. Comprehensive modeling and investigation of the effect of iron on the growth rate and lipid accumulation of Chlorella vulgaris cultured in batch photobioreactors.

    PubMed

    Concas, Alessandro; Steriti, Alberto; Pisu, Massimo; Cao, Giacomo

    2014-02-01

    Recent works have shown that specific strains of microalgae are capable to simultaneously increase their growth rate and lipid content when cultured under suitable concentrations of iron. While these results are promising in view of the exploitation of microalgae for producing biofuels, to the best of our knowledge, no mathematical model capable to describe the effect of iron on lipid accumulation in microalgae, has been so far proposed. A comprehensive mathematical model describing the effect of iron on chlorophyll synthesis, nitrogen assimilation, growth rate and lipid accumulation in a freshwater strain of Chlorella vulgaris is then proposed in this work. Model results are successfully compared with experimental data which confirm the positive effect of growing iron concentrations on lipid productivity of C. vulgaris. Thus, the proposed model might represent a useful tool to optimize iron-based strategies to improve the lipid productivity of microalgal cultures.

  20. Complex sediment deposition history on a wide continental shelf: Implications for the calculation of accumulation rates on the Great Barrier Reef

    NASA Astrophysics Data System (ADS)

    Lewis, Stephen E.; Olley, Jon; Furuichi, Takahisa; Sharma, Ashneel; Burton, Joanne

    2014-05-01

    Understanding the key processes controlling the delivery, deposition and fate of sediments on continental shelves is critical to appreciate the evolution of coasts and estuaries and to interpret geological sequences. This study presents radiocarbon and Optically Stimulated Luminescence (OSL) ages of sediment cores collected from key locations offshore from the Burdekin River, Australia, the largest single source of sediment delivered to the Great Barrier Reef (GBR) lagoon. The ages show variable sediment accumulation rates at the different locations that coincide with the Holocene avulsion history of the Burdekin River. Our data show that most fine sediment (<63 μm) delivered from the Burdekin River is retained within 50 km of the mouth, a finding that contrasts previous studies which postulated that fine sediments are advected northwards via longshore drift processes. The pairing of radiocarbon and OSL ages provides insights on resuspension regimes operating on the inner shelf of the GBR. It was thought that turbidity on inshore GBR coral reefs and seagrass meadows has increased as a result of increased erosion in the adjacent catchment from agricultural development. Our data show that the age of the sediments in Cleveland Bay (derived from the radiocarbon ages from shell and organic material) can be several thousand years older than when the sediment was last deposited (OSL ages). However, the increased turbidity could conceivably be caused from ‘new biologically-produced sediment’ (i.e. particulate organic matter) as a result of increased nutrient export to the GBR. We suggest that the composition of sediment in resuspension events before and after the wet season be analysed to examine whether newly delivered organic-rich sediment can affect coral reefs and seagrass meadows.

  1. How Integrated Management Strategies Promote Protein Quality of Cotton Embryos: High Levels of Soil Available N, N Assimilation and Protein Accumulation Rate

    PubMed Central

    Yang, HongKun; Meng, YaLi; Chen, BingLin; Zhang, XingYue; Wang, YouHua; Zhao, WenQing; Zhou, ZhiGuo

    2016-01-01

    Cottonseed is widely used as a source of ruminant feed and for industrial purposes. Therefore, there is a tremendous need to improve the nutritional value of cotton embryos. In this study, a conventional management (CM) and two integrated cotton management strategies (IMS1, IMS2) were performed at two soil fertility levels to study the relationships among soil N, N assimilation, embryonic protein accumulation and protein quality. The levels of proteins, essential amino acids, and semi-essential amino acids, especially those of glutamate, lysine, and methionine, were higher in IMS1 and IMS2 embryos than in CM embryos. These changes were significantly positively correlated with the soil-available N content, glutamine synthetase activity and peak value of protein accumulation rate and were negatively correlated with the free amino acid level. These results illustrated that integrated management strategies, especially the rates and timing of N application, raise the level of soil available N, which is beneficial for N assimilation in developing cotton embryos. The protein content was limited by the rate of protein accumulation rather than by the free amino acid content. The combination of target yield fertilization, a growth-driven N application schedule, a high plant density and the seedling raising with bio-organic fertilizer can substantially improve protein quality in cotton embryos, especially at a soil with low soil organic matter and total nitrogen. PMID:27532007

  2. How Integrated Management Strategies Promote Protein Quality of Cotton Embryos: High Levels of Soil Available N, N Assimilation and Protein Accumulation Rate.

    PubMed

    Yang, HongKun; Meng, YaLi; Chen, BingLin; Zhang, XingYue; Wang, YouHua; Zhao, WenQing; Zhou, ZhiGuo

    2016-01-01

    Cottonseed is widely used as a source of ruminant feed and for industrial purposes. Therefore, there is a tremendous need to improve the nutritional value of cotton embryos. In this study, a conventional management (CM) and two integrated cotton management strategies (IMS1, IMS2) were performed at two soil fertility levels to study the relationships among soil N, N assimilation, embryonic protein accumulation and protein quality. The levels of proteins, essential amino acids, and semi-essential amino acids, especially those of glutamate, lysine, and methionine, were higher in IMS1 and IMS2 embryos than in CM embryos. These changes were significantly positively correlated with the soil-available N content, glutamine synthetase activity and peak value of protein accumulation rate and were negatively correlated with the free amino acid level. These results illustrated that integrated management strategies, especially the rates and timing of N application, raise the level of soil available N, which is beneficial for N assimilation in developing cotton embryos. The protein content was limited by the rate of protein accumulation rather than by the free amino acid content. The combination of target yield fertilization, a growth-driven N application schedule, a high plant density and the seedling raising with bio-organic fertilizer can substantially improve protein quality in cotton embryos, especially at a soil with low soil organic matter and total nitrogen.

  3. Combined effects of water flow and copper concentration on the feeding behavior, growth rate, and accumulation of copper in tissue of the infaunal polychaete Polydora cornuta.

    PubMed

    Colvin, Marienne A; Hentschel, Brian T; Deheyn, Dimitri D

    2016-12-01

    We performed an experiment in a laboratory flume to test the effects of water flow speed and the concentration of aqueaous copper on the feeding behavior, growth rate, and accumulation of copper in the tissues of juvenile polychaetes Polydora cornuta. The experiment included two flow speeds (6 or 15 cm/s) and two concentrations of added copper (0 or 85 μg/L). Worms grew significantly faster in the faster flow and in the lower copper concentration. In the slower flow, the total time worms spent feeding decreased significantly as copper concentration increased, but copper did not significantly affect the time worms spent feeding in the faster flow. Across all treatments, there was a significant, positive relationship between the time individuals spent feeding and their relative growth rate. Worms were observed suspension feeding significantly more often in the faster flow and deposit feeding significantly more often in the slower flow, but copper concentration did not affect the proportion of time spent in either feeding mode. The addition of 85 μg/L copper significantly increased copper accumulation in P. cornuta tissue, but the accumulation did not differ significantly due to flow speed. There was a significant interaction between copper and flow; the magnitude of the difference in copper accumulation between the 0 and 85 μg/L treatments was greater in the faster flow than in the slower flow. In slow flows that favor deposit feeding, worms grow slowly and accumulate less copper in their tissue than in faster flows that favor suspension feeding and faster growth.

  4. Shallow Sediment Trace Metal Concentrations and Short-Term Accumulation Rates in the Neponset River Estuary, Massachusetts, USA

    NASA Astrophysics Data System (ADS)

    Spencer, J. R.; Zhu, J.; Olsen, C. R.

    2010-12-01

    The Neponset River estuary is a small estuary that drains into the Boston Harbor on the east coast of the United States. It is also a highly urbanized estuary and has a long history of urban development over 450 years. In July 2006, six sediment cores were collected in the Neponset River estuary to examine particle dynamics and sediment accumulation via radionuclide (Beryllium-7) dating, and to determine sediment metal concentrations (As, Cu, Pb, and Zn) via ED-XRF measurements. Measured sediment Be-7 profiles indicate various sedimentation environments, where sediment accumulation, resuspension or redeposition is likely to occur. High metal concentrations were often corresponding to high Be-7 inventories in sediment cores. Possible sources of trace metal contaminants in the water column include: storm water run-off, Combined Sewer Overflows (CSOs), a well-documented industrial pollution event that occurred upstream in the early to mid twentieth century, and the resuspension of sediment. Existing and future data will provide baseline information for quantifying the effects of the proposed and pending environmental restoration project, which includes the removal of the Baker Dam. The combined pre- and post-Dam removal data may then be used in cost-benefit analyses for other similar estuarine restoration projects.

  5. Measuring water accumulation rates using GRACE data in areas experiencing glacial isostatic adjustment: The Nelson River basin

    NASA Astrophysics Data System (ADS)

    Lambert, A.; Huang, J.; Kamp, G.; Henton, J.; Mazzotti, S.; James, T. S.; Courtier, N.; Barr, A. G.

    2013-12-01

    Recovery and Climate Experiment (GRACE) satellite-derived total water storage can be obscured by glacial isostatic adjustment. In order to solve this problem for the Nelson River drainage basin in Canada, a gravity rate map from 110 months (June 2002 to October 2011) of GRACE gravity data was corrected for glacial isostatic adjustment using an independent gravity rate map derived from updated GPS vertical velocities. The GPS-based map was converted to equivalent gravity rate using a transfer function developed from GPS and absolute-g data at colocated sites. The corrected GRACE gravity rate map revealed a major positive anomaly within the drainage basin, which was independently shown by hydrological data to be due to changes in water storage. The anomaly represents a cumulative increase at its center of about 340 mm of water, reflecting a progression from extreme drought to extremely wet conditions.

  6. Effect of altering the root-zone temperature on growth, translocation, carbon exchange rate, and leaf starch accumulation in the tomato.

    PubMed

    Hurewitz, J; Janes, H W

    1983-09-01

    Tomato seedlings (Lycopersicon esculentum Mill. cv Vendor) were grown hydroponically with their root systems maintained at a constant temperature for a 2-week period commencing with the appearance of the first true leaf. Based on fresh and dry weight and leaf area, the optimal root-zone temperature for seedling growth was 30 degrees C. The carbon exchange rate of the leaves was also found to increase with rising root-zone temperature up to 30 degrees C. However, a more complex relationship seems to exist between root-zone temperature and the accumulation of (14)C-labeled assimilates in the roots; inasmuch as there is no enhancement in this accumulation at the most growth promoting root-zone temperatures (22-30 degrees C).

  7. Geologic ages and accumulation rates of basalt-flow groups and sedimentary interbeds in selected wells at the Idaho National Engineering Laboratory, Idaho

    SciTech Connect

    Anderson, S.R.; Liszewski, M.J.; Cecil, L.D.

    1997-01-01

    Geologic ages and accumulation rates, estimated from regressions, were used to evaluate measured ages and interpreted stratigraphic and structural relations of basalt and sediment in the unsaturated zone and the Snake River Plain aquifer at the Idaho National Engineering Laboratory (INEL) in eastern Idaho. Geologic ages and accumulation rates were estimated from standard linear regressions of 21 mean potassium-argon (K-Ar) ages, selected mean paleomagnetic ages, and cumulative depths of a composite stratigraphic section composed of complete intervals of basalt and sediment that were deposited in areas of past maximum subsidence. Accumulation rates also were estimated from regressions of stratigraphic intervals in three wells in and adjacent to an area of interpreted uplift at and near the Idaho Chemical Processing Plant (ICPP) and the Test Reactor Area (TRA) to allow a comparison of rates in areas of past uplift and subsidence. Estimated geologic ages range from about 200 thousand to 1.8 million years before present and are reasonable approximations for the interval of basalt and sediment above the effective base of the aquifer, based on reported uncertainties of corresponding measured ages. Estimated ages between 200 and 800 thousand years are within the range of reported uncertainties for all 15 K-Ar ages used in regressions and two out of three -argon ({sup 40}Ar/{sup 39}Ar) ages of duplicate argon samples. Two sets of estimated ages between 800 thousand and 1.8 million years are within the range of reported uncertainties for all seven K-Ar ages used in regressions, which include one shared age of about 800 thousand years. Two sets of ages were estimated for this interval because K-Ar ages make up two populations that agree with previous and revised ages of three paleomagnetic subchrons. The youngest set of ages is consistent with a K-Ar age from the effective base of the aquifer that agrees with previous ages of the Olduvai Normal-Polarity Subchron.

  8. Leaf senescence in rice due to magnesium deficiency mediated defect in transpiration rate before sugar accumulation and chlorosis.

    PubMed

    Kobayashi, Natsuko I; Saito, Takayuki; Iwata, Naoko; Ohmae, Yoshimi; Iwata, Ren; Tanoi, Keitaro; Nakanishi, Tomoko M

    2013-08-01

    Magnesium (Mg) is an essential macronutrient supporting various functions, including photosynthesis. However, the specific physiological responses to Mg deficiency remain elusive. In this study, 2-week-old rice seedlings (Oryza sativa. cv. Nipponbare) with three expanded leaves (L2-L4) were transferred to Mg-free nutrient solution for 8 days. In the absence of Mg, on day 8, L5 and L6 were completely developed, while L7 just emerged. We also studied several mineral deficiencies to identify specific responses to Mg deficiency. Each leaf was analyzed in terms of chlorophyll, starch, anthocyanin and carbohydrate metabolites, and only absence of Mg was found to cause irreversible senescence of L5. Resupply of Mg at various time points confirmed that the borderline of L5 death was between days 6 and 7 of Mg deficiency treatment. Decrease in chlorophyll concentration and starch accumulation occurred simultaneously in L5 and L6 blades on day 8. However, nutrient transport drastically decreased in L5 as early as day 6. These data suggest that the predominant response to Mg deficiency is a defect in transpiration flow. Furthermore, changes in myo-inositol and citrate concentrations were detected only in L5 when transpiration decreased, suggesting that they may constitute new biological markers of Mg deficiency.

  9. A record of barite accumulation rate for marine export productivity changes in the tropical Indian Ocean during the Mid-Pliocene--Early-Pleistocene transition

    NASA Astrophysics Data System (ADS)

    Zhou, Liping; Ma, Zhongwu; Ding, Xuan

    2016-04-01

    One of the most interesting features in the marine oxygen isotope records is the gradual shift towards heavier 18O from the Mid-Pliocene, which ends with the initiation of Northern Hemisphere glaciation (NHG) around 2.7 Ma. The lack of significant change in sea surface temperature in the tropical Indian Ocean as revealed in the previous studies does not rule out their possible contributions to this dramatic climate change during the Mid-Pliocene transition. Changing circulation systems in the region will control the supply of nutrients for the water masses which in turn determine the marine productivity. In the areas of high productivity, ocean export productivity may potentially provide a mechanism of CO2 draw-down into the deep ocean, through which contributing to the lowering of the global temperature. In this study, we present a record of barite accumulation rate (BAR) for DSDP Site 214 drilled on the Ninetyeast Ridge. Here we use the marine barite, which is formed during the decay of organism in the twilight zone, as a proxy for ocean export productivity. Our results show that the BAR of Site 214 varies between 0.25 and 1.25 mg/cm2/kyr during the period between 4 Ma and 2 Ma. Five intervals of increased BAR from 3.6 Ma to 2.4 Ma are identified with the most distinct peak centred around 3 Ma. The overall pattern does not follow either the oxygen isotope record for the Site or the sea surface temperature and subsurface temperature reconstructed with the Mg/Ca of foraminifera. This suggests that regional changes in ocean circulation and water masses may have played more important role than temperature in controlling the productivity change in the tropical Indian Ocean. The relative higher productivity around 3 Ma may imply a biogenetic process towards the intensification of NHGs.

  10. Estimating sediment accumulation rates in Manila Bay, a marine pollution hot spot in the Seas of East Asia.

    PubMed

    Sta Maria, E J; Siringan, F P; Bulos, A dM; Sombrito, E Z

    2009-01-01

    The GEF/UNDP/IMO/PEMSEA project identifies Manila Bay as among the marine pollution hot spots in the Seas of East Asia. (210)Pb dating of its sediment can provide a historical perspective of its pollution loading. However, the validity of (210)Pb dating in a complex dynamic coastal system of Manila Bay may come into question. Land-based sediment input can be high and physical and biological processes can possibly disturb the sediment layers. In this report, the (210)Pb profiles of sediment cores from different parts of the bay are presented. The linear sedimentation rates are shown to be higher in the recent past and are also variable across the bay. The largest change in sedimentation rate, coincided with the occurrence of a volcanic eruption in 1991 and is shown by applying a variant of the CIC model in sedimentation rate calculations. The data suggest that (210)Pb dating can be useful in estimating relative magnitudes of sedimentation rates, even in a complex dynamic coastal system like Manila Bay.

  11. Effects of feeding and organism loading rate on PCB accumulation by Lumbriculus variegatus in sediment bioaccumulation testing

    EPA Science Inventory

    Sediment bioaccumulation test methods published by USEPA and ASTM in 2000 specify that the Lumbriculus variegatus, a freshwater oligochaete, should not be fed during the 28-day exposure and recommends an organism loading rate of total organic carbon in sediment to organism dry we...

  12. HPV16 and 18 genome amplification show different E4-dependence, with 16E4 enhancing E1 nuclear accumulation and replicative efficiency via its cell cycle arrest and kinase activation functions.

    PubMed

    Egawa, Nagayasu; Wang, Qian; Griffin, Heather M; Murakami, Isao; Jackson, Deborah; Mahmood, Radma; Doorbar, John

    2017-03-17

    To clarify E1^E4's role during high-risk HPV infection, the E4 proteins of HPV16 and 18 were compared side by side using an isogenic keratinocyte differentiation model. While no effect on cell proliferation or viral genome copy number was observed during the early phase of either virus life cycle, time-course experiments showed that viral genome amplification and L1 expression were differently affected upon differentiation, with HPV16 showing a much clearer E4 dependency. Although E4 loss never completely abolished genome amplification, its more obvious contribution in HPV16 focused our efforts on 16E4. As previously suggested, in the context of the virus life cycle, 16E4s G2-arrest capability was found to contribute to both genome amplification success and L1 accumulation. Loss of 16E4 also lead to a reduced maintenance of ERK, JNK and p38MAPK activity throughout the genome amplifying cell layers, with 16E4 (but not 18E4) co-localizing precisely with activated cytoplasmic JNK in both wild type raft tissue, and HPV16-induced patient biopsy tissue. When 16E1 was co-expressed with E4, as occurs during genome amplification in vivo, the E1 replication helicase accumulated preferentially in the nucleus, and in transient replication assays, E4 stimulated viral genome amplification. Interestingly, a 16E1 mutant deficient in its regulatory phosphorylation sites no longer accumulated in the nucleus following E4 co-expression. E4-mediated stabilisation of 16E2 was also apparent, with E2 levels declining in organotypic raft culture when 16E4 was absent. These results suggest that 16E4-mediated enhancement of genome amplification involves its cell cycle inhibition and cellular kinase activation functions, with E4 modifying the activity and function of viral replication proteins including E1. These activities of 16E4, and the different kinase patterns seen here with HPV18, 31 and 45, may reflect natural differences in the biology and tropisms of these viruses, as well as

  13. HPV16 and 18 genome amplification show different E4-dependence, with 16E4 enhancing E1 nuclear accumulation and replicative efficiency via its cell cycle arrest and kinase activation functions

    PubMed Central

    Jackson, Deborah; Mahmood, Radma

    2017-01-01

    To clarify E1^E4’s role during high-risk HPV infection, the E4 proteins of HPV16 and 18 were compared side by side using an isogenic keratinocyte differentiation model. While no effect on cell proliferation or viral genome copy number was observed during the early phase of either virus life cycle, time-course experiments showed that viral genome amplification and L1 expression were differently affected upon differentiation, with HPV16 showing a much clearer E4 dependency. Although E4 loss never completely abolished genome amplification, its more obvious contribution in HPV16 focused our efforts on 16E4. As previously suggested, in the context of the virus life cycle, 16E4s G2-arrest capability was found to contribute to both genome amplification success and L1 accumulation. Loss of 16E4 also lead to a reduced maintenance of ERK, JNK and p38MAPK activity throughout the genome amplifying cell layers, with 16E4 (but not 18E4) co-localizing precisely with activated cytoplasmic JNK in both wild type raft tissue, and HPV16-induced patient biopsy tissue. When 16E1 was co-expressed with E4, as occurs during genome amplification in vivo, the E1 replication helicase accumulated preferentially in the nucleus, and in transient replication assays, E4 stimulated viral genome amplification. Interestingly, a 16E1 mutant deficient in its regulatory phosphorylation sites no longer accumulated in the nucleus following E4 co-expression. E4-mediated stabilisation of 16E2 was also apparent, with E2 levels declining in organotypic raft culture when 16E4 was absent. These results suggest that 16E4-mediated enhancement of genome amplification involves its cell cycle inhibition and cellular kinase activation functions, with E4 modifying the activity and function of viral replication proteins including E1. These activities of 16E4, and the different kinase patterns seen here with HPV18, 31 and 45, may reflect natural differences in the biology and tropisms of these viruses, as well as

  14. Sedimentation rates in eastern North America reveal strong links between regional climate, depositional environments, and sediment accumulation

    NASA Astrophysics Data System (ADS)

    Goring, S. J.; McLachlan, J. S.; Jackson, S. T.; Blaauw, M.; Christen, J.; Marlon, J.; Blois, J.; Williams, J. W.

    2011-12-01

    PalEON is a multidisciplinary project that combines paleo and modern ecological data with state-of-the-art statistical and modelling tools to examine the interactions between climate, fire and vegetation during the past two millennia in the northeastern United States. A fundamental challenge for PalEON (and paleo research more broadly) is to improve age modelling to yield more accurate sediment-core chronologies. To address this challenge, we assessed sedimentation rates and their controls for 218 lakes and mires in the northeastern U.S. Sedimentation rates (yr/cm) were calculated from age-depth models, which were obtained from the Neotoma database (www.neotomadb.org) and other contributed pollen records. The age models were recalibrated to IntCal09 and augmented in some cases using biostratigraphic markers (Picea decline, 16 kcal BP - 10.5 kcal BP; Quercus rise, 12 - 9.1 kcal BP; and Alnus decline, 11.5 - 10.6 kcal BP) as described in Blois et al. (2011). Relationships between sedimentation rates and sediment age, site longitude, and depositional environment (lacustrine or mire) are significant but weak. There are clear and significant links between variations in the NGRIP record of δ18O and sedimentation in mires across the PalEON region, but no links to lacustrine sedimentation rates. This result indicates that super-regional climatic control of primary productivity, and thus autochthonic sediment deposition, dominates in mires while deposition in lacustrine basins may be driven primarily by local and regional factors including watershed size, surficial materials,and regional vegetation. The shape of the gamma probability functions that best describe sedimentation rate distributions are calculated and presented here for use as priors in Bayesian age modelling applications such as BACON (Blaauw and Christen, in press). Future applications of this research are also discussed.

  15. Simulation of continental basin margin sedimentation in response to crustal movements, eustatic sea level change, and sediment accumulation rates

    SciTech Connect

    Helland-Hansen, W.; Kendall, C.G.St.C.; Lerche, I.; Nakayama, K.

    1988-10-01

    As eustasy, subsidence, and sediment accumulation vary, a 2D computer-based graphical simulation generates on-lapping and off-lapping geometries of both marine and near coastal alluvial deposits, reproducing timelines within sediment-bodies at basin margins. In the simulation, deposition is expressed by creation of new surfaces above previous ones. Thicknesses of layers are reduced by both erosion and compaction while their surfaces move vertically in response to tectonic change and loading. Simulation is divided into a series of equal time steps in which sediment is deposited as an array of en-echelon columns that mark the top of the previous depositional surface. The volume of sediment deposited in each time step is expressed as a 2D cross section and is derived from two right-angle triangles (sand and shale), whose areas are a 2D expression of the quantity of sediment deposited at that time step and whose length matches the width of the offshore sediment wedge seaward of the shoreline. Each column in the array is filled by both marine sediments up to sea level, and alluvial sediments to a surface determined by an alluvial angle that is projected landward from the shore to its intersection with the previous surface. Each time the area representing the sediment column is subtracted from the triangles, the triangle heights are reduced correspondingly. This process is repeated until the triangle heights match the position of sea level above the sediment surface, at which time the remaining area of the sediment triangle is deposited seaward as a single wedge of offshore sediments. This simulation is designed to aid interpretation of stratigraphic sequences. It can be used as a complement to seismic stratigraphy or can be used alone as an inexpensive test of stratigraphic models.

  16. Urban rivers as conveyors of hydrocarbons to sediments of estuarine areas: source characterization, flow rates and mass accumulation.

    PubMed

    Mauad, Cristiane R; Wagener, Angela de L R; Massone, Carlos G; Aniceto, Mayara da S; Lazzari, Letícia; Carreira, Renato S; Farias, Cássia de O

    2015-02-15

    Aliphatic (n-C12-n-C40, unresolved complex mixture, resolved peaks) and aromatic hydrocarbons (46 PAH) were investigated in suspended particulate matter (SPM) sampled over eleven months in six of the major rivers and two channels of the Guanabara Bay Basin. PAH flow rates of the most contaminated rivers, the contribution to the PAH sediment load of the receiving bay, and the main sources of hydrocarbons were determined. PAH (38) ranged from 28 ng L(-1) to 11,514 ng L(-1). Hydrocarbon typology and statistical evaluation demonstrated contribution of distinct sources in different regions and allowed quantification of these contributions. Total flow rate for the five major rivers amounts to 3 t year(-1) and responds for 30% of the total PAH annual input into the northern area of the Guanabara Bay. For the first time PAH mass deposited in the bay sediments has been estimated and shall serve as base for decision making and source abatement.

  17. A propensity score analysis shows that empirical treatment with linezolid does not increase the thirty-day mortality rate in patients with Gram-negative bacteremia.

    PubMed

    Ternavasio-de la Vega, Hugo-Guillermo; Mateos-Díaz, Ana-María; Martinez, Jose-Antonio; Almela, Manel; Cobos-Trigueros, Nazaret; Morata, Laura; De-la-Calle, Cristina; Sala, Marta; Mensa, Josep; Marcos, Miguel; Soriano, Alex

    2014-12-01

    The role of linezolid in empirical therapy of suspected bacteremia remains unclear. The aim of this study was to evaluate the influence of empirical use of linezolid or glycopeptides in addition to other antibiotics on the 30-day mortality rates in patients with Gram-negative bacteremia. For this purpose, 1,126 patients with Gram-negative bacteremia in the Hospital Clinic of Barcelona from 2000 to 2012 were included in this study. In order to compare the mortality rates between patients who received linezolid or glycopeptides, the propensity scores on baseline variables were used to balance the treatment groups, and both propensity score matching and propensity-adjusted logistic regression were used to compare the 30-day mortality rates between the groups. The overall 30-day mortality rate was 16.0% during the study period. Sixty-eight patients received empirical treatment with linezolid, and 1,058 received glycopeptides. The propensity score matching included 64 patients in each treatment group. After matching, the mortality rates were 14.1% (9/64) in patients who received glycopeptides and 21.9% (14/64) in those who received linezolid, and a nonsignificant association between empirical linezolid treatment and mortality rate (odds ratio [OR], 1.63; 95% confidence interval [CI], 0.69 to 3.82; P = 0.275, McNemar's test) was found. This association remained nonsignificant when variables that remained unbalanced after matching were included in a conditional logistic regression model. Further, the stratified propensity score analysis did not show any significant relationship between empirical linezolid treatment and the mortality rate after adjustment by propensity score quintiles or other variables potentially associated with mortality. In conclusion, the propensity score analysis showed that empirical treatment with linezolid compared with that with glycopeptides was not associated with 30-day mortality rates in patients with Gram-negative bacteremia.

  18. Denudation rates determined from the accumulation of in situ-produced 10Be in the luquillo experimental forest, Puerto Rico

    USGS Publications Warehouse

    Brown, Erik Thorson; Stallard, Robert F.; Larsen, Matthew C.; Raisbeck, Grant M.; Yiou, Francoise

    1995-01-01

    We present a simple method for estimation of long-term mean denudation rates using in situ-produced cosmogenic 10Be in fluvial sediments. Procedures are discussed to account for the effects of soil bioturbation, mass wasting and attenuation of cosmic rays by biomass and by local topography. Our analyses of 10Be in quartz from bedrock outcrops, soils, mass-wasting sites and riverine sediment from the Icacos River basin in the Luquillo Experimental Forest, Puerto Rico, are used to characterize denudation for major landform elements in that basin. The 10Be concentration of a discharge-weighted average of size classes of river sediment corresponds to a long-term average denudation of ≈ 43 m Ma −1, consistent with mass balance results. 

  19. Locomotor response to exercise in relation to plasma lactate accumulation and heart rate in Andalusian and Anglo-Arabian horses.

    PubMed

    Muñoz, A; Santisteban, R; Rubio, M D; Riber, C; Agüera, E I; Castejón, F M

    1999-10-01

    To establish the effect of the locomotor pattern on heart rate (HR) and plasma lactate (LA), 28 horses, 18 Andalusian (AN) and 10 Anglo-Arabian (AA), aged 3-4 years, were studied. After a warm-up period, the horses performed a four-step test at 5, 6, 7 and 8 m/s, covering 1000 m at each velocity. HR was monitored, LA was analysed at rest and after each workload, and images were filmed. The locomotor parameters determined were stride duration (SD), frequency (SF) and length (SL), step and bipedal support durations, stance (restraint and propulsion) and swing phase durations, and stride vertical component. The HR and LA were significantly higher in the AN horses from velocities of 5 m/s. Similarly, the stride vertical component was higher in the AN horses at the trot and in the leading forelimbs at the gallop. Conversely, at all the galloping velocities, swing phase duration and stride length were longer in the AA horses. Significant correlations between HR, LA and locomotor pattern were only found in the AN horses. It was concluded that the greater stride vertical component in the AN horses limits SL and the cranial advancement of the hoof, with the result that reaching a longer SL triggers an increase in HR and LA. AA horses reach a balance between SL and SF, improving the efficiency of the gait.

  20. Partitioning and accumulation rates of polycyclic aromatic hydrocarbons into polydimethylsiloxane thin films and black worms from aqueous samples.

    PubMed

    Qin, Zhipei; Mok, Sandra; Ouyang, Gangfeng; Dixon, D George; Pawliszyn, Janusz

    2010-05-14

    Partition equilibriums and extraction rates of polycyclic aromatic hydrocarbons (PAHs) were examined for live biomonitoring with oligochaetes (black worms, Lumbriculus variegatus) and for high surface area chemical passive samplers constructed from polydimethylsiloxane thin film. The goals were to better understand the principles of bioconcentration by aquatic organisms and to aid in the design of a convenient and simple chemical monitoring tool to replace the use of live animals. The worms and films were exposed simultaneously to the contaminated water stream. In the initial extraction stage, similar extracted amount per surface area indicated that thin-film samplers could mimic the behavior of worms for passive sampling. Equilibrium was reached faster by the thin films than by the worms. A good linear relationship between the bioconcentration factors and the film-water partition coefficients of PAHs was found, which demonstrated the feasibility of thin-film sampler for determining the bioavailability of PAHs in water. Compared to the lengthy and inconvenient process of liquid-liquid extraction in worm treatment, thin-film technique simplifies the sample pretreatment procedure by integrating sampling and sample preparation.

  1. Effect of different tannery sludge compost amendment rates on growth, biomass accumulation and yield responses of Capsicum plants.

    PubMed

    Silva, Jayara D C; Leal, Tamara T B; Araújo, Ademir S F; Araujo, Raul M; Gomes, Regina L F; Melo, Wanderley J; Singh, Rajeev P

    2010-10-01

    Composting has been recognized as one of the most cost effective and environmentally sound alternatives for organic wastes recycling from long and composted wastes have a potential to substitute inorganic fertilizers. We investigated the potential of composted tannery sludge for ornamental purposes and to examine the effects of two different composts and concentrations on ornamental Capsicum growth. The two composts were produced with tannery sludge and the composition of each compost was: compost(1) of tannery sludge (C(1)TS) - tannery sludge+sugarcane straw and cattle manure mixed in the ratio 1:3:1 (v:v:v); compost(2) of tannery sludge (C(2)TS) - tannery sludge+"carnauba" straw and cattle manure in the ratio 1:3:1 (v:v:v). Each compost was amended with soil at rates (% v:v) of 0%, 25%, 50%, 75% and 100% (designation hereafter as T(1)-T(5), respectively). The number of leaves and fruits were counted, and the stem length was also measured. Chlorophyll content was recorded on three leaves of each harvested plant prior to harvest. Number of leaves and fruits, stem length, dry weight of shoot and roots did not vary significantly between the plants grown in two tannery composts. All the treatments with composted tannery sludge application (T(2)-T(5)) significantly increased the number of leaves and fruits, stem length and chlorophyll content compared with the control (T(1)). The chlorophyll content was higher in plants growing in the C(1)TS compared to C(2)TS. The results of the present study further suggest that Capsicum may be a good option to be grown on composted tannery amended soil.

  2. Accumulation of cytoplasmic Cdk1 is associated with cancer growth and survival rate in epithelial ovarian cancer

    PubMed Central

    Shin, Ha-Yeon; Chung, Joon-Yong; Kang, Eun Suk; Lee, Eun-ju; Kim, Jae-Hoon

    2016-01-01

    Cyclin dependent kinase 1 (Cdk1) have previously reported correlation with cancer growth and a key regulator for cell cycle. Mostly, Cdk1′s function of nucleus for cell cycle is well known to be associated with cancer, but cytoplasmic Cdk1′s traits are not clearly identified, yet. We revealed that tissue microarray blocks of epithelial ovarian cancer (n = 249) showed increased level of cytoplasmic Cdk1 (p < 0.001), but not in nucleus (p = 0.192) of histologic cell type independently. On survival analysis, Cdk1 overexpression conferred a significantly worse prognosis in 5-year overall survival (Log-rank p = 0.028, Hazard ratio = 2.016, 95% CI = 1.097 to 4.635). Also, the expression of Cdk1 was increased in ovarian cancer cell lines and Gene Expression Omnibus datasets. When the expression and activity of Cdk1 were inhibited by si-Cdk1 or RO-3306 which is a potent Cdk1 inhibitor, the growth of ovarian cancer was diminished. Moreover, combined treatment with RO-3306 and cisplatin in ovarian cancer significantly elevated anti-cancer effects than single-agent treatment. In conclusion, cytoplasmic Cdk1 expression which was elevated in ovarian cancer predicts a poor overall survival. The inhibition of Cdk1 expression and activity reduced ovarian cancer growth. PMID:27385216

  3. Replacement of the glucose phosphotransferase transport system by galactose permease reduces acetate accumulation and improves process performance of Escherichia coli for recombinant protein production without impairment of growth rate.

    PubMed

    De Anda, Ramón; Lara, Alvaro R; Hernández, Vanessa; Hernández-Montalvo, Verónica; Gosset, Guillermo; Bolívar, Francisco; Ramírez, Octavio T

    2006-05-01

    Acetate accumulation under aerobic conditions is a common problem in Escherichia coli cultures, as it causes a reduction in both growth rate and recombinant protein productivity. In this study, the effect of replacing the glucose phosphotransferase transport system (PTS) with an alternate glucose transport activity on growth kinetics, acetate accumulation and production of two model recombinant proteins, was determined. Strain VH32 is a W3110 derivative with an inactive PTS. The promoter region of the chromosomal galactose permease gene galP of VH32 was replaced by the strong trc promoter. The resulting strain, VH32GalP+ acquired the capacity to utilize glucose as a carbon source. Strains W3110 and VH32GalP+ were transformed for the production of recombinant TrpLE-proinsulin accumulated as inclusion bodies (W3110-PI and VH32GalP+-PI) and for production of soluble intracellular green fluorescent protein (W3110-pV21 and VH32GalP+-pV21). W3110-pV21 and VH32GalP+-pV21 were grown in batch cultures. Maximum recombinant protein concentration, as determined from fluorescence, was almost four-fold higher in VH32GalP+-pV21, relative to W3110-pV21. Maximum acetate concentration reached 2.8 g/L for W3110-pV21 cultures, whereas a maximum of 0.39 g/L accumulated in VH32GalP+-pV21. W3110-PI and VH32GalP+-PI were grown in batch and fed-batch cultures. Compared to W3110-PI, the engineered strain maintained similar production and growth rate capabilities while reducing acetate accumulation. Specific glucose consumption rate was lower and product yield on glucose was higher in VH32GalP+-PI fed-batch cultures. Altogether, strains with the engineered glucose uptake system showed improved process performance parameters for recombinant protein production over the wild-type strain.

  4. Accumulate-Repeat-Accumulate-Accumulate Codes

    NASA Technical Reports Server (NTRS)

    Divsalar, Dariush; Dolinar, Samuel; Thorpe, Jeremy

    2007-01-01

    Accumulate-repeat-accumulate-accumulate (ARAA) codes have been proposed, inspired by the recently proposed accumulate-repeat-accumulate (ARA) codes. These are error-correcting codes suitable for use in a variety of wireless data-communication systems that include noisy channels. ARAA codes can be regarded as serial turbolike codes or as a subclass of low-density parity-check (LDPC) codes, and, like ARA codes they have projected graph or protograph representations; these characteristics make it possible to design high-speed iterative decoders that utilize belief-propagation algorithms. The objective in proposing ARAA codes as a subclass of ARA codes was to enhance the error-floor performance of ARA codes while maintaining simple encoding structures and low maximum variable node degree.

  5. Glaciation in the Late Noachian Icy Highlands: Ice accumulation, distribution, flow rates, basal melting, and top-down melting rates and patterns

    NASA Astrophysics Data System (ADS)

    Fastook, James L.; Head, James W.

    2015-02-01

    Geological evidence for extensive non-polar ice deposits of Amazonian age indicates that the current cold and dry climate of Mars has persisted for several billion years. The geological record and climate history of the Noachian, the earliest period of Mars history, is less certain, but abundant evidence for fluvial channels (valley networks) and lacustrine environments (open-basin lakes) has been interpreted to represent warm and wet conditions, including rainfall and runoff. Alternatively, recent atmospheric modeling results predict a "cold and icy" Late Noachian Mars in which moderate atmospheric pressure accompanied by a full water cycle produce an atmosphere where temperature declines with elevation following an adiabatic lapse rate, in contrast to the current situation on Mars, where temperature is almost completely determined by latitude. These results are formulated in the Late Noachian Icy Highlands (LNIH) model, in which these cold and icy conditions lead to the preferential deposition of snow and ice at high elevations, such as the southern uplands. What is the fate of this snow and ice and the nature of glaciation in such an environment? What are the prospects of melting of these deposits contributing to the observed fluvial and lacustrine deposits? To address these questions, we report on a glacial flow-modeling analysis using a Mars-adapted ice sheet model with LNIH climate conditions. The total surface/near-surface water inventory is poorly known for the Late Noachian, so we explore the LNIH model in a "supply-limited" scenario for a range of available water abundances and a range of Late Noachian geothermal fluxes. Our results predict that the Late Noachian icy highlands (above an equilibrium line altitude of approximately +1 km) were characterized by extensive ice sheets of the order of hundreds of meters thick. Due to extremely cold conditions, the ice-flow velocities in general were very low, less than a few mm/yr, and the regional ice

  6. Snow Accumulation and Spring Melt Rates of Bogs and Fens in the North Granny Creek Catchment Basin, Hudson Bay Lowlands, Ontario

    NASA Astrophysics Data System (ADS)

    Cook, C. F.; Price, J. S.

    2009-05-01

    The Hudson Bay Lowlands contain one of the most extensive, contiguous peatland complexes in the world. Interlinked patterned peatlands developed in this region because of the cool climate, low-gradient topography and an underlying layer of low conductivity marine sediments. There is currently little research regarding the mechanisms that control runoff and surface water connectivity in this region, especially the functions of different peatland types on runoff production and flow pathways. Runoff generation in these systems is dependent on several factors such as soil and pool storage capacity, snow accumulation and melt rates, and peatland morphometry. Snowmelt accounts for a major portion of total annual runoff in this region and the timing of the melt will determine effective runoff production from a peatland catchment. One of the objectives of this project is to identify the processes and mechanisms that generate spring snowmelt runoff in different peatland types (i.e. bogs and fens) and quantify the relative contribution of each type in a peatland-dominated catchment basin. This research is being conducted in a 30 km2 catchment basin located near the DeBeers Victor diamond mine, located 90 km west of Attawapiskat, Ontario. The North Granny Creek basin is located approximately 3 km from the mine pit and is comprised of several peatland types and forms. The surface hydrology of this area is expected to be affected by groundwater depressurization due to dewatering of the mine pit by deep groundwater pumping wells. Effects of this activity on surface hydrology could possibly include increased soil storage capacity due to drier conditions and decreased melt rates due to reduced inputs of warm groundwater. Surface water connectivity is usually at a maximum in the spring because of a relatively impermeable frost table and low soil storage capacity which reduces infiltration. These effects of melt will not be observed uniformly over the entire catchment because of the

  7. Carbonic anhydrase activity and photosynthetic rate in the tree species Paulownia tomentosa Steud. Effect of dimethylsulfoxide treatment and zinc accumulation in leaves.

    PubMed

    Lazova, Galia N; Naidenova, Tsveta; Velinova, Katya

    2004-03-01

    The enzyme carbonic anhydrase (CA) (EC 4.2.1.1) catalyzes the reversible conversion of CO2 to HCO3- and has been shown to be involved in photosynthesis. The enzyme has been shown in animals, plants, eubacteria and viruses, but similar reports on the evidence for CA activity in tree plants does not be appear to be available. In the preliminary analyses of the work, the CA activity in leaf extracts from the tree species Paulownia tomentosa Steud. (introduced in Bulgaria) is described. A connection between CA activity and the rate of photosynthetic CO2 fixation is shown. In the second portion of the work, the effect of 10(-4) mol/L and 10(-2) mol/L dimethylsulfoxide (DMSO) on the zinc accumulation in leaves is demonstrated. It is suggested that CA activity is an indicator of the level of physiologically active zinc in leaves of P. tomentosa Steud. A connection between the process of zinc accumulation in leaves and the activity of the enzymes CA and glycolate oxidase (GO) (EC 1.1.3.1) is established.

  8. The influence of structural features of marine humic substances on the accumulation rates of cadmium by a blue mussel Mytilus edulis

    SciTech Connect

    Pempkowiak, J.; Kozuch, J. ); Southon, T. )

    1994-01-01

    Laboratory experiments revealed that both concentration and origin of humic substances (HS) influence the accumulation rates of cadmium by the blue mussel Mytilus edulis. In the concentration of humic substances typical of seawater, the increase is about 60% and 100%, respectively, for aquatic and sedimentary humic substances. The phenomenon was attributed to the stimulation of cadmium uptake due to complexing properties of the substances toward cadmium. Complexing capacity of sedimentary humic substances was found to be 0.57 [mu]g/mg HS, that of aquatic substances 0.41 [mu]g/mg HS. Cross Polarization Magic Angle Spinning (CP/MAS) [sup 13]C NMR of the investigated humic substances revealed differences in the spectra at about 175, 100, 55 and 32 ppm. This was attributed to the varying content of oxygen containing functional groups involved in formation of complexes with metal ions. 8 refs., 4 figs., 3 tabs.

  9. Ovalbumin expression in the oviduct magnum of hens is related to the rate of egg laying and shows distinct stress-type-specific responses.

    PubMed

    Zhao, J P; Zhang, Q; Jiao, H C; Wang, X J; Jiang, M J; Luo, H; Lin, H

    2016-10-01

    Three trials were performed to evaluate the association of ovalbumin (OVA) abundance in the oviduct magnum with egg production and the underlying regulatory mechanism by glucocorticoids. In trial 1, twenty Hy-Line Brown layers (56-60 weeks of age) with different combinations (n = 5/combination) of laying rate (high or low) and egg weight (high or low) were selected from an initial group of 300. An upregulated expression of magnum OVA was observed (p < 0.05) in hens with higher laying rate, regardless of egg weight. In trial 2, eighty Hy-Line Brown layers (80-90 weeks of age) were subjected to the forced moulting (n = 8). The abundance of OVA transcript and protein in the magnum was significantly decreased during moulting (p < 0.01), and the same was true for laying rate (p < 0.01) and serum oestrogen (p < 0.05). In trial 3, forty-five 56-week-old Hy-Line Brown layers were kept individually (n = 15) in the following conditions for 10 days: constant optimal ambient temperature at 23 °C and ad libitum feeding, high ambient temperature at 32 °C for 6 h/day (10:00-16:00) and ad libitum feeding (32AL), and constant optimal ambient temperature at 23 °C and pair-fed to the 32AL hens. In spite of elevated corticosterone in circulation, OVA synthesis, blood oestrogen and laying rate were not affected by heat exposure (p > 0.05). These results allow concluding that OVA expression in the oviduct magnum of hens is related to the rate of egg laying and shows distinct stress-type-specific responses.

  10. Biogeochemical cycling in an organic-rich coastal marine basin: 9. Sources and accumulation rates of vascular plant-derived organic material

    NASA Astrophysics Data System (ADS)

    Haddad, Robert I.; Martens, Christopher S.

    1987-11-01

    The sources, degradation and burial of vascular plant debris deposited over the past several decades in the lagoonal sediments of Cape Lookout Bight, North Carolina, are quantified using alkaline cupric oxide lignin oxidation product (LOP) analysis. Non-woody angiosperms, accounting for 92 ± 32% of the recognizable sedimentary vascular plant debris, are calculated to contribute 23 ± 17% of the total organic carbon buried over the past decade (upper meter of sediment column). When combined with a previously established sedimentary organic carbon budget for this site (Martens and Klump, 1984; Martens et al., 1987, in preparation) a vascular plant derived carbon burial rate of 26 ± 20 mole C m -2 yr -1 is calculated for this same time interval. The refractory nature and invariant depth distributions of the lignin oxidation products (LOP), when coupled with evidence for constant degradation rates of metabolizable materials, indicate that sediment accumulation at this site has been a steady state process with respect to source and burial of organic carbon since its conversion from an inner-continental shelf to a lagoonal environment during the late 1960's. Thus systematic down-core decreases in labile organic matter result from early diagenetic processes rather than input rate variations.

  11. The rate of second electron transfer to QB(-) in bacterial reaction center of impaired proton delivery shows hydrogen-isotope effect.

    PubMed

    Maróti, Ágnes; Wraight, Colin A; Maróti, Péter

    2015-02-01

    The 2nd electron transfer in reaction center of photosynthetic bacterium Rhodobacter sphaeroides is a two step process in which protonation of QB(-) precedes interquinone electron transfer. The thermal activation and pH dependence of the overall rate constants of different RC variants were measured and compared in solvents of water (H2O) and heavy water (D2O). The electron transfer variants where the electron transfer is rate limiting (wild type and M17DN, L210DN and H173EQ mutants) do not show solvent isotope effect and the significant decrease of the rate constant of the second electron transfer in these mutants is due to lowering the operational pKa of QB(-)/QBH: 4.5 (native), 3.9 (L210DN), 3.7 (M17DN) and 3.1 (H173EQ) at pH7. On the other hand, the proton transfer variants where the proton transfer is rate limiting demonstrate solvent isotope effect of pH-independent moderate magnitude (2.11±0.26 (WT+Ni(2+)), 2.16±0.35 (WT+Cd(2+)) and 2.34±0.44 (L210DN/M17DN)) or pH-dependent large magnitude (5.7 at pH4 (L213DN)). Upon deuteration, the free energy and the enthalpy of activation increase in all proton transfer variants by about 1 kcal/mol and the entropy of activation becomes negligible in L210DN/M17DN mutant. The results are interpreted as manifestation of equilibrium and kinetic solvent isotope effects and the structural, energetic and kinetic possibility of alternate proton delivery pathways are discussed.

  12. Hydraulic conductance as well as nitrogen accumulation plays a role in the higher rate of leaf photosynthesis of the most productive variety of rice in Japan

    PubMed Central

    Taylaran, Renante D.; Adachi, Shunsuke; Ookawa, Taiichiro; Usuda, Hideaki; Hirasawa, Tadashi

    2011-01-01

    An indica variety Takanari is known as one of the most productive rice varieties in Japan and consistently produces 20–30% heavier dry matter during ripening than Japanese commercial varieties in the field. The higher rate of photosynthesis of individual leaves during ripening has been recognized in Takanari. By using pot-grown plants under conditions of minimal mutual shading, it was confirmed that the higher rate of leaf photosynthesis is responsible for the higher dry matter production after heading in Takanari as compared with a japonica variety, Koshihikari. The rate of leaf photosynthesis and shoot dry weight became larger in Takanari after the panicle formation and heading stages, respectively, than in Koshihikari. Roots grew rapidly in the panicle formation stage until heading in Takanari compared with Koshihikari. The higher rate of leaf photosynthesis in Takanari resulted not only from the higher content of leaf nitrogen, which was caused by its elevated capacity for nitrogen accumulation, but also from higher stomatal conductance. When measured under light-saturated conditions, stomatal conductance was already decreased due to the reduction in leaf water potential in Koshihikari even under conditions of a relatively small difference in leaf–air vapour pressure difference. In contrast, the higher stomatal conductance was supported by the maintenance of higher leaf water potential through the higher hydraulic conductance in Takanari with the larger area of root surface. However, no increase in root hydraulic conductivity was expected in Takanari. The larger root surface area of Takanari might be a target trait in future rice breeding for increasing dry matter production. PMID:21527630

  13. Hydraulic conductance as well as nitrogen accumulation plays a role in the higher rate of leaf photosynthesis of the most productive variety of rice in Japan.

    PubMed

    Taylaran, Renante D; Adachi, Shunsuke; Ookawa, Taiichiro; Usuda, Hideaki; Hirasawa, Tadashi

    2011-07-01

    An indica variety Takanari is known as one of the most productive rice varieties in Japan and consistently produces 20-30% heavier dry matter during ripening than Japanese commercial varieties in the field. The higher rate of photosynthesis of individual leaves during ripening has been recognized in Takanari. By using pot-grown plants under conditions of minimal mutual shading, it was confirmed that the higher rate of leaf photosynthesis is responsible for the higher dry matter production after heading in Takanari as compared with a japonica variety, Koshihikari. The rate of leaf photosynthesis and shoot dry weight became larger in Takanari after the panicle formation and heading stages, respectively, than in Koshihikari. Roots grew rapidly in the panicle formation stage until heading in Takanari compared with Koshihikari. The higher rate of leaf photosynthesis in Takanari resulted not only from the higher content of leaf nitrogen, which was caused by its elevated capacity for nitrogen accumulation, but also from higher stomatal conductance. When measured under light-saturated conditions, stomatal conductance was already decreased due to the reduction in leaf water potential in Koshihikari even under conditions of a relatively small difference in leaf-air vapour pressure difference. In contrast, the higher stomatal conductance was supported by the maintenance of higher leaf water potential through the higher hydraulic conductance in Takanari with the larger area of root surface. However, no increase in root hydraulic conductivity was expected in Takanari. The larger root surface area of Takanari might be a target trait in future rice breeding for increasing dry matter production.

  14. Hamsters chewing betel quid or areca nut directly show a decrease in body weight and survival rates with concomitant epithelial hyperplasia of cheek pouch.

    PubMed

    Chiang, Chun-Pin; Chang, Mei-Chi; Lee, Jang-Jaer; Chang, Julia Yu-Fong; Lee, Po-Hsuen; Hahn, Liang-Jiunn; Jeng, Jiiang-Huei

    2004-08-01

    Betel quid (BQ) chewing is strongly associated with the occurrence of oral leukoplakia, oral submucous fibrosis, and oral cancer. There are about 200-600 million BQ chewers in the world. Previous animal studies support the potential carcinogenicity of BQ in different test systems. However, little animal experiment has let hamsters or rats to chew BQ directly, similar to that in humans. In the present study, we established a hamster model of chewing BQ or areca nut (AN). A total of 81 2-week-old hamsters were randomly divided into three groups: 25 for control group, 28 for BQ-chewing group, and 28 for AN-chewing group. These animals were fed with powdered diet with/without BQ or AN for 18 months. Although the consumption of BQ or AN showed some variations, hamsters fed with powdered diet could chew and grind AN or BQ into small pieces of coarse fibers during the entire experimental period. The survival rate of AN-chewing hamsters decreased significantly after 6 months of exposure. The mean survival time was 15.6 +/- 0.9 months for control animals, 13.6 +/- 0.98 months for AN-chewing animals, and 15.7 +/- 0.55 months for BQ-chewing animals. The body weight of BQ- or AN-chewing animals also decreased after 4-13 months. Hamsters fed with AN for 18 months showed hyperkeratosis in 80% and acanthosis in 50% of cheek pouches. Animals fed with BQ for 18 months also showed hyperkeratosis in 93% and acanthosis in 14% of cheek pouches. These results indicate that AN and BQ components may induce alterations in proliferation and differentiation of oral epithelial cells. Animal model of chewing BQ or AN can be useful for future tumor initiation, promotion and chemoprevention experiments simulating the condition of BQ chewing in humans.

  15. "The Show"

    ERIC Educational Resources Information Center

    Gehring, John

    2004-01-01

    For the past 16 years, the blue-collar city of Huntington, West Virginia, has rolled out the red carpet to welcome young wrestlers and their families as old friends. They have come to town chasing the same dream for a spot in what many of them call "The Show". For three days, under the lights of an arena packed with 5,000 fans, the…

  16. Seasonal variation of meteorological variables and recent surface ablation / accumulation rates on Davies Dome and Whisky Glacier, James Ross Island, Antarctica

    NASA Astrophysics Data System (ADS)

    Láska, K.; Nývlt, D.; Engel, Z.; Budík, L.

    2012-04-01

    In this study, surface mass balance data of two glaciers on James Ross Island, Antarctica, and its spatial and temporal variations are evaluated using snow ablation stakes, ground-penetrating radar, and dGPS measurements. The investigated glaciers are located on the Ulu Peninsula, northern part of James Ross Island. Davies Dome is an ice dome, which originates on the surface of a flat volcanic mesa at elevations >400 m a.s.l. and terminates with a single 700 m wide outlet in the Whisky Bay. Davies Dome has an area of ~6.5 km2 and lies in the altitude range of 0-514 m a.s.l. Whisky Glacier is a cold-based land-terminating valley glacier surrounded by an extensive moraine ridges made of debris-covered ice. The glacier has an area of ~2.4 km2 and lies in the altitude range of 215-520 m a.s.l. Within several summer austral summers, extensive field programme were carried out on both glaciers including the operation of two automatic weather stations, field mapping and mass balance measurements. Each station was equipped with albedometer CM7B (Kipp-Zonen, Netherlands), air temperature and humidity sensor EMS33 (EMS, Czech Republic), propeller anemometer 05103 (Young, USA), and snow depth sensors (Judd, USA). In the period 2009-2011, high seasonal and interdiurnal variability of incoming solar radiation and near-surface air temperature was found as a result of changes in the circulation patterns and synoptic-scale weather systems moving in the Circumpolar Trough. High ablation and accumulation rates were recorded mainly in the spring and summer seasons (October-February), while negligible changes were found in winter (May-September). The effects of positive degree-day temperatures on the surface ablation rates were examined using a linear regression model. In this approach, near-surface air temperature maps on the glacier surfaces were derived from digital elevation model according to actual temperature lapse rates. Mass balance investigations started in 2006 on Davies

  17. Direct 2-Arm Comparison Shows Benefit of High-Dose-Rate Brachytherapy Boost vs External Beam Radiation Therapy Alone for Prostate Cancer

    SciTech Connect

    Khor, Richard; Duchesne, Gillian; Tai, Keen-Hun; Foroudi, Farshad; Chander, Sarat; Van Dyk, Sylvia; Garth, Margaret; Williams, Scott

    2013-03-01

    Purpose: To evaluate the outcomes of patients treated for intermediate- and high-risk prostate cancer with a single schedule of either external beam radiation therapy (EBRT) and high-dose-rate brachytherapy (HDRB) boost or EBRT alone. Methods and Materials: From 2001-2006, 344 patients received EBRT with HDRB boost for definitive treatment of intermediate- or high-risk prostate cancer. The prescribed EBRT dose was 46 Gy in 23 fractions, with a HDR boost of 19.5 Gy in 3 fractions. This cohort was compared to a contemporaneously treated cohort who received EBRT to 74 Gy in 37 fractions, using a matched pair analysis. Three-dimensional conformal EBRT was used. Matching was performed using a propensity score matching technique. High-risk patients constituted 41% of the matched cohorts. Five-year clinical and biochemical outcomes were analyzed. Results: Initial significant differences in prognostic indicators between the unmatched treatment cohorts were rendered negligible after matching, providing a total of 688 patients. Median biochemical follow-up was 60.5 months. The 5-year freedom from biochemical failure was 79.8% (95% confidence interval [CI], 74.3%-85.0%) and 70.9% (95% CI, 65.4%-76.0%) for the HDRB and EBRT groups, respectively, equating to a hazard ratio of 0.59 (95% CI, 0.43-0.81, P=.0011). Interaction analyses showed no alteration in HDR efficacy when planned androgen deprivation therapy was administered (P=.95), but a strong trend toward reduced efficacy was shown compared to EBRT in high-risk cases (P=.06). Rates of grade 3 urethral stricture were 0.3% (95% CI, 0%-0.9%) and 11.8% (95% CI, 8.1%-16.5%) for EBRT and HDRB, respectively (P<.0001). No differences in clinical outcomes were observed. Conclusions: This comparison of 2 individual contemporaneously treated HDRB and EBRT approaches showed improved freedom from biochemical progression with the HDR approach. The benefit was more pronounced in intermediate- risk patients but needs to be weighed against

  18. Carbon accumulation in a permafrost polygon peatland: steady long-term rates in spite of shifts between dry and wet conditions.

    PubMed

    Gao, Yang; Couwenberg, John

    2015-02-01

    Ice-wedge polygon peatlands contain a substantial part of the carbon stored in permafrost soils. However, little is known about their long-term carbon accumulation rates (CAR) in relation to shifts in vegetation and climate. We collected four peat profiles from one single polygon in NE Yakutia and cut them into contiguous 0.5 cm slices. Pollen density interpolation between AMS (14)C dated levels provided the time span contained in each of the sample slices, which--in combination with the volumetric carbon content--allowed for the reconstruction of CAR over decadal and centennial timescales. Vegetation representing dry palaeo-ridges and wet depressions was reconstructed with detailed micro- and macrofossil analysis. We found repeated shifts between wet and dry conditions during the past millennium. Dry ridges with associated permafrost growth originated during phases of (relatively) warm summer temperature and collapsed during relatively cold phases, illustrating the important role of vegetation and peat as intermediaries between ambient air temperature and the permafrost. The average long-term CAR across the four profiles was 10.6 ± 5.5 g C m(-2) yr(-1). Time-weighted mean CAR did not differ significantly between wet depression and dry ridge/hummock phases (10.6 ± 5.2 g C m(-2) yr(-1) and 10.3 ± 5.7 g C m(-2) yr(-1), respectively). Although we observed increased CAR in relation to warm shifts, we also found changes in the opposite direction and the highest CAR actually occurred during the Little Ice Age. In fact, CAR rather seems to be governed by strong internal feedback mechanisms and has roughly remained stable on centennial time scales. The absence of significant differences in CAR between dry ridge and wet depression phases suggests that recent warming and associated expansion of shrubs will not affect long-term rates of carbon burial in ice-wedge polygon peatlands.

  19. Grafts of extra-adrenal chromaffin cells as aggregates show better survival rate and regenerative effects on parkinsonian rats than dispersed cell grafts.

    PubMed

    Galan-Rodriguez, B; del-Marco, A; Flores, J A; Ramiro-Fuentes, S; Gonzalez-Aparicio, R; Tunez, I; Tasset, I; Fernandez-Espejo, E

    2008-03-01

    The objective was to discern the neuroregenerative effect of grafts of extra-adrenal cells of the Zuckerkandl's paraganglion (ZP) in the nigrostriatal circuit, by using the retrograde model of parkinsonism in rats. The antiparkinsonian efficacy of two types of grafting procedures was studied (cell aggregates vs. dispersed cells), and GDNF and TGFbeta(1) (dopaminotrophic factors) as well as dopamine presence in extra-adrenal tissue was analyzed. Extra-adrenal chromaffin cells are noradrenergics, tissue dopamine is low, and they express both GDNF and TGFbeta(1). Grafts of cell aggregates, not of dispersed cells, exerted a trophic regeneration of the host striatum, leading to amelioration of motor deficits. Sprouting of spared dopaminergic fibers within the striatum, reduction of dopamine axon degeneration, and/or enhanced phenotypic expression of TH would explain striatal regeneration. Grafted cells as aggregates showed a better survival rate than dispersed cells, and they express higher levels of GDNF. Higher survivability and GDNF content together with the neurorestorative and dopaminotrophic action of both GDNF and TGFbeta(1) could account for striatal recovery and functional amelioration after grafting ZP cell aggregates. Finally, nigral degeneration and partial degeneration of ventral tegmental area were not precluded after transplantation, indicating that the trophic effect of grafts was local within the host striatum.

  20. Induction of duodenal mucosal tumors of intestinal epithelial cell origin showing frequent nuclear β-catenin accumulation similar to the concurrently induced colorectal tumors in rats after treatment with azoxymethane.

    PubMed

    Kikuchihara, Yoh; Onda, Nobuhiko; Kimura, Masayuki; Kangawa, Yumi; Mizukami, Sayaka; Yoshida, Toshinori; Shibutani, Makoto

    2015-01-01

    Azoxymethane (AOM) is a potent carcinogen used for induction of colon tumors in rats and mice. It is also known that AOM treatment induces small bowel tumors in addition to colorectal tumors in rats. The present study examined the histogenesis of AOM-induced rat duodenal tumors in comparison with concurrently induced colorectal tumors by histochemical and immunohistochemical approaches. Duodenal and colorectal tumors were positive for both periodic acid-Schiff reaction and Alcian blue staining. Immunohistochemically, duodenal tumors were positive for intestinal epithelial markers such as cytokeratin (CK) 20 (100%) and mucin (MUC) 2 (91.7%) but negative for pancreaticobiliary markers such as CK7 (100%) and MUC1 (100%). All colorectal tumors were also negative for CK7 and MUC1 but positive for CK20. Eighty percent of colorectal tumors were positive for MUC2. In addition, nuclear accumulation of β-catenin was found in duodenal tumors (70.8%), which was similar to colorectal tumors (90.0%). These results indicate that duodenal tumors induced by AOM treatment of rats were derived from intestinal epithelium. Similar to colorectal tumors, nuclear accumulation of β-catenin indicates activation of Wnt signaling as a driving force for tumor progression in AOM-induced duodenal tumors.

  1. Nicotiana benthamiana plants asymptomatically infected by Pelargonium line pattern virus show unusually high accumulation of viral small RNAs that is neither associated with DCL induction nor RDR6 activity.

    PubMed

    Pérez-Cañamás, Miryam; Blanco-Pérez, Marta; Forment, Javier; Hernández, Carmen

    2017-01-15

    Pelargonium line pattern virus (PLPV, Tombusviridae) normally establishes systemic, low-titered and asymptomatic infections in its hosts. This type of interaction may be largely determined by events related to RNA silencing, a major antiviral mechanism in plants. This mechanism is triggered by double or quasi double-stranded (ds) viral RNAs which are cut by DCL ribonucleases into virus small RNAs (vsRNAs). Such vsRNAs are at the core of the silencing process as they guide sequence-specific RNA degradation Host RNA dependent-RNA polymerases (RDRs), and particularly RDR6, strengthen antiviral silencing by promoting biosynthesis of secondary vsRNAs. To approach PLPV-host relationship, here we have characterized the vsRNAs that accumulate in PLPV-infected Nicotiana benthamiana. Such accumulation was found unprecedented high despite DCLs were not induced in infected tissue and neither vsRNA generation nor PLPV infection was apparently affected by RDR6 impairment. From the obtained data, triggers and host factors likely involved in anti-PLPV silencing are proposed.

  2. Accumulation and conversion of sugars by developing wheat grains. VII. Effect of changes in sieve tube and endosperm cavity sap concentrations on the grain filling rate. [Triticum aestivum

    SciTech Connect

    Fisher, D.B.; Gifford, R.M.

    1987-06-01

    The extent to which wheat grain growth is dependent on transport pool solute concentration was investigated by the use of illumination and partial grain removal to vary solute concentrations in the sieve tube and endosperm cavity saps of the wheat ear (Triticum aestivum L.). Short-term grain growth rates were estimated indirectly from the product of phloem area, sieve tube sap concentration, and /sup 32/P translocation velocity. On a per grain basis, calculated rates of mass transport through the peduncle were fairly constant over a substantial range in other transport parameters (i.e. velocity, concentration, phloem area, and grain number). The rates were about 40% higher than expected; this probably reflects some unavoidable bias on faster-moving tracer in the velocity estimates. Sieve tube sap concentration increased in all experiments (by 20 to 64%), with a concomitant decline in velocity (to as low as 8% of the initial value). Endosperm cavity sucrose concentration also increased in all experiments, but cavity sap osmolality and total amino acid concentration remained nearly constant. No evidence was found for an increase in the rate of mass transport per grain through the peduncle in response to the treatments. This apparent unresponsiveness of grain growth rate to increased cavity sap sucrose concentration conflicts with earlier in vitro endosperm studies showing that sucrose uptake increased with increasing external sucrose concentration up to 150 to 200 millimolar.

  3. Sexual selection and maintenance of sex: evidence from comparisons of rates of genomic accumulation of mutations and divergence of sex-related genes in sexual and hermaphroditic species of Caenorhabditis.

    PubMed

    Artieri, Carlo G; Haerty, Wilfried; Gupta, Bhagwati P; Singh, Rama S

    2008-05-01

    Several hypotheses have been proposed to explain the persistence of dioecy despite the reproductive advantages conferred to hermaphrodites, including greater efficiency at purging deleterious mutations in the former. Dioecy can benefit from both mutation purging and accelerated evolution by bringing together beneficial mutations in the same individual via recombination and shuffling of genotypes. In addition, mathematical treatment has shown that sexual selection is also capable of mitigating the cost of maintaining separate sexes by increasing the overall fitness of sexual populations, and genomic comparisons have shown that sexual selection can lead to accelerated evolution. Here, we examine the advantages of dioecy versus hermaphroditism by comparing the rate of evolution in sex-related genes and the rate of accumulation of deleterious mutations using a large number of orthologs (11,493) in the dioecious Caenorhabditis remanei and the hermaphroditic Caenorhabditis briggsae. We have used this data set to estimate the deleterious mutation rate per generation, U, in both species and find that although it is significantly higher in hermaphrodites, both species are at least 2 orders of magnitude lower than the value required to explain the persistence of sex by efficiency at purging deleterious mutations alone. We also find that genes expressed in sperm are evolving rapidly in both species; however, they show a greater increase in their rate of evolution relative to genes expressed in other tissues in C. remanei, suggesting stronger sexual selection pressure acting on these genes in dioecious species. Interestingly, the persistence of a signal of rapid evolution of sperm genes in C. briggsae suggests a recent evolutionary origin of hermaphrodism in this lineage. Our results provide empirical evidence of increased sexual selection pressure in dioecious animals, supporting the possibility that sexual selection may play an important role in the maintenance of sexual

  4. Accumulate Repeat Accumulate Coded Modulation

    NASA Technical Reports Server (NTRS)

    Abbasfar, Aliazam; Divsalar, Dariush; Yao, Kung

    2004-01-01

    In this paper we propose an innovative coded modulation scheme called 'Accumulate Repeat Accumulate Coded Modulation' (ARA coded modulation). This class of codes can be viewed as serial turbo-like codes, or as a subclass of Low Density Parity Check (LDPC) codes that are combined with high level modulation. Thus at the decoder belief propagation can be used for iterative decoding of ARA coded modulation on a graph, provided a demapper transforms the received in-phase and quadrature samples to reliability of the bits.

  5. The period of the follicular phase during which the uterus of mares shows estrus-like echotexture influences the subsequent pregnancy rate.

    PubMed

    Mateu-Sánchez, S; Newcombe, J R; Garcés-Narro, C; Cuervo-Arango, J

    2016-10-01

    The interval from both spontaneous and prostaglandin (PGF)-induced luteolysis to ovulation is greatly variable in mares. Several reports have shown a positive association between the length of the interval from PGF treatment to ovulation (ITO) and the subsequent pregnancy rate (PR). However, it is not known whether this association also occurs in estrous cycles with spontaneous luteolysis. The main objective of this study was to determine the effect of the duration of estrus-like echotexture of the uterus during the follicular phase on the subsequent PR in both spontaneous and PGF-induced cycles. A total of 768 estrous cycles from 325 thoroughbred mares were analyzed (401 estruses were induced with exogenous PGF and 367 cycles were not treated with PGF). The following factors were taken into account to determine the effect on PR: age of the mare, stallion, year of breeding, month of season, reproductive status of the mare, use of PGF treatment, duration of follicular phase with estrus-like echotexture, interovulatory interval (IOI; in spontaneous cycles), and ITO (in PGF-induced cycles). The age of the mare (P = 0.017), mare status (P = 0.031), the ITO (P = 0.041), and the duration of the follicular phase with estrus-like echotexture (P < 0.001) influenced the PR. The PR increased with the duration of estrus and of endometrial edema in both PGF-induced and spontaneous cycles. The correlation between the duration of endometrial edema and the IOI and ITO was positive (r = 0.5) and significant (P < 0.05).

  6. Heart rate variability shows different cardiovascular modulation in Parkinson's disease patients with tremor dominant subtype compared to those with akinetic rigid dominant subtype.

    PubMed

    Solla, Paolo; Cadeddu, Christian; Cannas, Antonino; Deidda, Martino; Mura, Nicola; Mercuro, Giuseppe; Marrosu, Francesco

    2015-10-01

    Parkinson's disease (PD) can present with different motor subtypes depending on the predominant symptoms (tremor or rigidity/bradykinesia). Slower disease progression and less cognitive decline are observed in tremor-dominant patients compared to those with akinetic-rigid subtype. Autonomic cardiovascular disorders have been described in parkinsonian patients, although the definite correlations with different subtypes of PD are not clear. In this context, heart rate variability (HRV) analysis represents a non-invasive and established tool in assessing cardiovascular autonomic modulation. We investigate cardiovascular autonomic modulation in PD patients with tremor dominant subtype in comparison to akinetic rigid dominant subtype subjects using HRV analysis. Twenty-eight PD patients (17 with tremor dominant subtype and 11 with akinetic rigid dominant subtype) were enrolled and compared to 17 age and sex-matched healthy controls. HRV was analyzed in time- and frequency-domains. Low-frequency (LF) values were significantly lower in the akinetic rigid dominant subtype than in the tremor dominant group [LF 41.4 ± 13.6 vs 55.5 ± 11.6 (p < 0.007)] indicating that the disease led to a more evident impairment of the baroreflex modulation of the autonomic outflow mediated by both sympathetic and parasympathetic systems in the first class of patients. These findings support the biological relevance of clinical subtypes supporting the idea of a different pathophysiological process between these subtypes. These differences also suggest that different subtypes may also result in different responses to therapy or in the possible development of cardiovascular side effects of dopaminergic drugs in these different populations.

  7. Sensory evaluation ratings and moisture contents show that soy is acceptable as a partial replacement for all-purpose wheat flour in peanut butter graham crackers.

    PubMed

    Romanchik-Cerpovicz, Joelle E; Abbott, Amy E; Dent, Laura A

    2011-12-01

    Fortification can help individuals achieve adequate nutritional intake. Foods may be fortified with soy flour as a source of protein for individuals limiting their intake of animal products, either due to personal dietary preference or to reduce their intake of saturated fat, a known risk factor for heart disease. This study determined the feasibility of fortifying peanut butter graham crackers by substituting soy flour for all-purpose wheat flour at 25%, 50%, 75%, or 100% weight/weight. Graham crackers fortified with soy flour were compared to similarly prepared nonfortified peanut butter graham crackers. Moisture contents of all graham crackers were similar. Consumers (n=102) evaluated each graham cracker using a hedonic scale and reported liking the color, smell, and texture of all products. However, unlike peanut butter graham crackers fortified with lower levels of soy, graham crackers fortified with 100% weight/weight soy flour had less than desirable flavor, aftertaste, and overall acceptability. Overall, this study shows that fortification of peanut butter graham crackers up to 75% weight/weight with soy flour for all-purpose wheat flour is acceptable.

  8. Compartmentation Analysis of Paraquat Fluxes in Maize Roots as a Means of Estimating the Rate of Vacuolar Accumulation and Translocation to Shoots.

    PubMed Central

    DiTomaso, J. M.; Hart, J. J.; Kochian, L. V.

    1993-01-01

    Efflux analysis conducted after five loading periods of various lengths (2, 6, 12, 18, or 24 h) was used to investigate uptake, compartmentation, and translocation of [14C]paraquat in maize (Zea mays L.) seedlings. The time course for net paraquat uptake (paraquat concentration in uptake solution = 25[mu]M) into maize roots was linear (56.7 nmol g-1 root fresh weight h-1) for 24 h. Estimates of changes in paraquat content in the vacuole, cytoplasm, and cell wall after 2-, 6-, 12-, 18-, and 24-h loading periods indicated that the cell wall saturated rapidly, whereas accumulation of paraquat into the vacuole increased linearly (12.4 nmol g-1 root fresh weight h-1) over 24 h. In contrast to vacuolar accumulation, cytoplasmic paraquat content appeared to approach saturation. The half-time for paraquat efflux from the cell wall (16.6 min [plus or minus] 1.2 SD) and cytoplasm (58.8 min [plus or minus] 8.9 SD remained relatively constant regardless of the length of the loading period, whereas the half-time for efflux from the vacuole was considerably longer and increased linearly with increased loading time (6.1-18.7 h). The time course for paraquat translocation to the shoot was linear within a 24-h exposure to radiolabeled herbicide, but translocation did not begin until 5 h after initiation of treatment. The experimental approach used in these experiments provides a valuable method for examining the movement of paraquat in maize seedlings. Results indicate that the herbicide slowly accumulates in the vacuole of root cells but is also translocated to the shoot. PMID:12231834

  9. Organic-Carbon Sequestration in Soil/Sediment of the Mississippi River Deltaic Plain - Data; Landscape Distribution, Storage, and Inventory; Accumulation Rates; and Recent Loss, Including a Post-Katrina Preliminary Analysis (Chapter B)

    USGS Publications Warehouse

    Markewich, Helaine W.; Buell, Gary R.; Britsch, Louis D.; McGeehin, John P.; Robbins, John A.; Wrenn, John H.; Dillon, Douglas L.; Fries, Terry L.; Morehead, Nancy R.

    2007-01-01

    Soil/sediment of the Mississippi River deltaic plain (MRDP) in southeastern Louisiana is rich in organic carbon (OC). The MRDP contains about 2 percent of all OC in the surface meter of soil/sediment in the Mississippi River Basin (MRB). Environments within the MRDP differ in soil/sediment organic carbon (SOC) accumulation rate, storage, and inventory. The focus of this study was twofold: (1) develop a database for OC and bulk density for MRDP soil/sediment; and (2) estimate SOC storage, inventory, and accumulation rates for the dominant environments (brackish, intermediate, and fresh marsh; natural levee; distributary; backswamp; and swamp) in the MRDP. Comparative studies were conducted to determine which field and laboratory methods result in the most accurate and reproducible bulk-density values for each marsh environment. Sampling methods included push-core, vibracore, peat borer, and Hargis1 sampler. Bulk-density data for cores taken by the 'short push-core method' proved to be more internally consistent than data for samples collected by other methods. Laboratory methods to estimate OC concentration and inorganic-constituent concentration included mass spectrometry, coulometry, and loss-on-ignition. For the sampled MRDP environments, these methods were comparable. SOC storage was calculated for each core with adequate OC and bulk-density data. SOC inventory was calculated using core-specific data from this study and available published and unpublished pedon data linked to SSURGO2 map units. Sample age was estimated using isotopic cesium (137Cs), lead (210Pb), and carbon (14C), elemental Pb, palynomorphs, other stratigraphic markers, and written history. SOC accumulation rates were estimated for each core with adequate age data. Cesium-137 profiles for marsh soil/sediment are the least ambiguous. Levee and distributary 137Cs profiles show the effects of intermittent allochthonous input and/or sediment resuspension. Cesium-137 and 210Pb data gave the most

  10. Atmospheric mercury accumulation and washoff processes on impervious urban surfaces

    USGS Publications Warehouse

    Eckley, C.S.; Branfireun, B.; Diamond, M.; Van Metre, P.C.; Heitmuller, F.

    2008-01-01

    The deposition and transport of mercury (Hg) has been studied extensively in rural environments but is less understood in urbanized catchments, where elevated atmospheric Hg concentrations and impervious surfaces may efficiently deliver Hg to waterways in stormwater runoff. We determined the rate at which atmospheric Hg accumulates on windows, identified the importance of washoff in removing accumulated Hg, and measured atmospheric Hg concentrations to help understand the relationship between deposition and surface accumulation. The main study location was Toronto, Ontario. Similar samples were also collected from Austin, Texas for comparison of Hg accumulation between cities. Windows provided a good sampling surface because they are ubiquitous in urban environments and are easy to clean/blank allowing the assessment of contemporary Hg accumulation. Hg Accumulation rates were spatially variable ranging from 0.82 to 2.7 ng m-2 d-1 in Toronto and showed similar variability in Austin. The highest accumulation rate in Toronto was at the city center and was 5?? higher than the rural comparison site (0.58 ng m-2 d-1). The atmospheric total gaseous mercury (TGM) concentrations were less than 2?? higher between the rural and urban locations (1.7 ?? 0.3 and 2.7 ?? 1.1 ng m-3, respectively). The atmospheric particulate bound fraction (HgP), however, was more than 3?? higher between the rural and urban sites, which may have contributed to the higher urban Hg accumulation rates. Windows exposed to precipitation had 73 ?? 9% lower accumulation rates than windows sheltered from precipitation. Runoff collected from simulated rain events confirmed that most Hg accumulated on windows was easily removed and that most of the Hg in washoff was HgP. Our results indicate that the Hg flux from urban catchments will respond rapidly to changes in atmospheric concentrations due to the mobilization of the majority of the surface accumulated Hg during precipitation events. ?? 2008 Elsevier

  11. Patterns of sediment accumulation in the tidal marshes of Maine

    USGS Publications Warehouse

    Wood, M.E.; Kelley, J.T.; Belknap, D.F.

    1989-01-01

    One year's measurements of surficial sedimentation rates (1986-1987) for 26 Maine marsh sites were made over marker horizons of brick dust. Observed sediment accumulation rates, from 0 to 13 mm yr-1, were compared with marsh morphology, local relative sea-level rise rate, mean tidal range, and ice rafting activity. Marshes with four different morphologies (back-barrier, fluvial, bluff-toe, and transitional) showed distinctly different sediment accumulation rates. In general, back-barrier marshes had the highest accumulation rates and blufftoe marshes had the lowest rates, with intermediate values for transitional and fluvial marshes. No causal relationship between modern marsh sediment accumulation rate and relative sea-level rise rate (from tide gauge records) was observed. Marsh accretionary balance (sediment accumulation rate minus relative sea-level rise rate) did not correlate with mean tidal range for this meso- to macro-tidal area. Estimates of ice-rafted debris on marsh sites ranged from 0% to >100% of measured surficial sedimentation rates, indicating that ice transport of sediment may make a significant contribution to surficial sedimentation on Maine salt marshes. ?? 1989 Estuarine Research Federation.

  12. Estimation of Potassium Recirculation in Tomato Plants by Comparison of the Rates of Potassium and Calcium Accumulation in the Tops with Their Fluxes in the Xylem Stream

    PubMed Central

    Armstrong, Michael J.; Kirkby, Ernest A.

    1979-01-01

    A procedure to estimate the extent of K recirculation in plants is proposed. This is based on the ratio of the upward fluxes of K to Ca in the xylem sap from root to shoot with the ratio of K to Ca accumulation in plant tops. In a preliminary investigation the factors influencing the K to Ca ratio in the xylem sap were considered. Tomato plants were grown at three levels of K nutrition and harvested at different times during the 24-hour day period. It was shown that the K to Ca ratio in xylem sap changed dramatically depending on the time of sap collection after decapitation, the values falling from over 2 to less than unity over the 4-hour period of collection. Diurnal effects on exudation were less marked but also of significance. The level of K nutrition was of little importance. It is suggested that a representative xylem sap from tomato plants can best be obtained from samples taken between 15 and 60 minutes after decapitation. In a second experiment K recirculation was estimated. At nine harvesting stages over a 24-hour period the K to Ca ratio in the xylem sap was invariably higher than the K to Ca ratio of accumulation in the tops over the same period. From this information it was calculated that about 20% of the upward flux of K in the xylem stream resulted from recirculated K. PMID:16660872

  13. Worldwide trends show oropharyngeal cancer rates increasing

    Cancer.gov

    NCI scientists report that the incidence of oropharyngeal cancer significantly increased during the period 1983-2002 among people in countries that are economically developed. Oropharyngeal cancer occurs primarily in the middle part of the throat behind t

  14. Changes in growth rate and macroelement and trace element accumulation in Hydrocharis morsus-ranae L. during the growing season in relation to environmental contamination.

    PubMed

    Polechońska, Ludmiła; Samecka-Cymerman, Aleksandra; Dambiec, Małgorzata

    2017-02-01

    The temporal variations in plant chemistry connected with its life cycle may affect the cycling of elements in an ecosystem as well as determine the usefulness of the species in phytoremediation and bioindication. In this context, there is a gap in knowledge on the role of floating plants for elements cycling in aquatic reservoirs. The aim of the study was to determine if there are variations in Hydrocharis morsus-ranae (European frog-bit) bioaccumulation capacity and the growth rate of its population during the growing season and to test the impact of environmental pollution on these features. The content of macroelements (Ca, K, Mg, N, Na, P, S) and trace metals (Cd, Co, Cu, Cr, Hg, Fe, Mn, Ni, Pb, Zn) was determined in H. morsus-ranae collected monthly from June to October from habitats differing in environmental contamination. The results showed that the highest content of most trace metals (Co, Cr, Cu, Hg, Mn, Ni, Zn) and some nutrients (N, P) in plants as well as the greatest bioaccumulation efficiency occurred simultaneously in the beginning of the growing season. In the following months, a dilution effect (manifested by a decrease in content) related to the rapid growth was observed. Co, Mn, and Ni content in plant tissues reflected the level of environmental contamination throughout the growing season which makes H. morsus-ranae a potential biomonitor of pollution for these metals. Considering the great bioaccumulation ability, high sensitivity to contamination, and low biomass of European frog-bit in polluted systems, further investigation is required to assess the real phytoremediation capability of the species.

  15. Mass accumulation rate of detrital materials in Lake Suigetsu as a potential proxy for heavy precipitation: a comparison of the observational precipitation and sedimentary record

    NASA Astrophysics Data System (ADS)

    Suzuki, Yoshiaki; Tada, Ryuji; Yamada, Kazuyoshi; Irino, Tomohisa; Nagashima, Kana; Nakagawa, Takeshi; Omori, Takayuki

    2016-02-01

    In the densely populated region of East Asia, it is important to know the mechanism, scale, and frequency of heavy precipitation brought about during the monsoons and typhoons. However, observational data, which cover only several decades, are insufficient to examine the long-term trend of extreme precipitation and its background mechanism. In humid areas, the transport flux of a suspended detrital material through a river system is known to have an empirical power relationship with precipitation. Thus, the sedimentation flux of a fine detrital material could potentially be used as a proxy for reconstructing past heavy precipitation events. To test the idea that the sedimentation flux of detrital materials records past heavy precipitation events (e.g., typhoons), we focused on the detrital flux estimated from the annually laminated sediment of Lake Suigetsu, central Japan, which is capable of accurately correlating the age of detrital flux with the precipitation record. We first established a precise age model (error within ±1 year in average) beginning in 1920 A.D. on the basis of varve counting fine-tuned by correlation between event layers with historical floods. The flux of the detrital material (g/cm2/year) was estimated on the basis of Al2O3 content (wt%), dry bulk density (g/cm3), and sedimentation rate (cm/year) calculated from the age model. The detrital flux of background sedimentation showed a weak positive correlation with annual and monthly (June and September) precipitation excluding heavy precipitation that exceeded 100 mm/day. Furthermore, the thickness of instantaneous event layers, which corresponds to several maxima of detrital flux and is correlated with floods that occurred mainly during typhoons, showed a positive relationship with the total amount of precipitation that caused a flood event. This result suggests that the detrital flux maxima (deposition of event layers) record past extreme precipitation events that were likely associated with

  16. Bladder accumulated dose in image-guided high-dose-rate brachytherapy for locally advanced cervical cancer and its relation to urinary toxicity

    NASA Astrophysics Data System (ADS)

    Zakariaee, Roja; Hamarneh, Ghassan; Brown, Colin J.; Gaudet, Marc; Aquino-Parsons, Christina; Spadinger, Ingrid

    2016-12-01

    The purpose of this study was to estimate locally accumulated dose to the bladder in multi-fraction high-dose-date (HDR) image-guided intracavitary brachytherapy (IG-ICBT) for cervical cancer, and study the locally-accumulated dose parameters as predictors of late urinary toxicity. A retrospective study of 60 cervical cancer patients who received five HDR IG-ICBT sessions was performed. The bladder outer and inner surfaces were segmented for all sessions and a bladder-wall contour point-set was created in MATLAB. The bladder-wall point-sets for each patient were registered using a deformable point-set registration toolbox called coherent point drift (CPD), and the fraction doses were accumulated. Various dosimetric and volumetric parameters were calculated using the registered doses, including r{{\\text{D}}n \\text{c{{\\text{m}}\\text{3}}}} (minimum dose to the most exposed n-cm3 volume of bladder wall), r V n Gy (wall volume receiving at least m Gy), and r\\text{EQD}{{2}n \\text{c{{\\text{m}}\\text{3}}}} (minimum equivalent biologically weighted dose to the most exposed n-cm3 of bladder wall), where n  =  1/2/5/10 and m  =  3/5/10. Minimum dose to contiguous 1 and 2 cm3 hot-spot volumes was also calculated. The unregistered dose volume histogram (DVH)-summed equivalent of r{{\\text{D}}n \\text{c{{\\text{m}}3}}} and r\\text{EQD}{{2}n \\text{c{{\\text{m}}3}}} parameters (i.e. s{{\\text{D}}n \\text{c{{\\text{m}}\\text{3}}}} and s\\text{EQD}{{2}n \\text{c{{\\text{m}}3}}} ) were determined for comparison. Late urinary toxicity was assessed using the LENT-SOMA scale, with toxicity Grade 0-1 categorized as Controls and Grade 2-4 as Cases. A two-sample t-test was used to identify the differences between the means of Control and Case groups for all parameters. A binomial logistic regression was also performed between the registered dose parameters and toxicity grouping. Seventeen patients were in the Case and 43 patients in the Control group. Contiguous

  17. Modern accumulation rates and a budget of sediment off the Gaoping (Kaoping) River, SW Taiwan: A tidal and flood dominated depositional environment around a submarine canyon

    NASA Astrophysics Data System (ADS)

    Huh, Chih-An; Lin, Hui-Ling; Lin, Saulwood; Huang, Ya-Wen

    2009-03-01

    Ninety-two box cores collected during 2004-2006 from an area of ~ 3000 km 2 off the Gaoping (formerly spelled Kaoping) River, SW Taiwan, were analyzed for fallout radionuclides ( 210Pb, 137Cs and 7Be) to elucidate sedimentation rates and processes, and for the calculation of a sediment budget. The study area is located at an active collision margin with a narrow shelf and a submarine canyon extending essentially into the river's mouth. The results indicate fairly constant hemipelagic sedimentation in much of the open margin and for most of the time except in the inner shelf and along the axis of the canyon where sediment transport is more dynamic and is controlled by tidal current and wave activities constantly, and by fluvial floods or gravity-driven flows episodically. Sedimentation rates in the study area derived from 210Pb and constrained by 137Cs vary from 0.04 to 1.5 cm/yr, with the highest rates (> 1 cm/yr) flanking the Gaoping canyon over the upper slope (200-600 m) and the lowest rates (< 0.1 cm/yr) in the distal basin beyond the continental slope. The depocenter delineated from 210Pb-based sedimentation rates overlaps with the area covered by a flood layer resulting from super-typhoon Haitang in July 2005. Such correspondence supports the notion that the processes operating on event timescale have bearing on the formation of the sediment strata over centennial or longer timescales. From the distribution of sedimentation rates, sediment deposited in the study area annually is estimated to be 6.6 Mton/yr, accounting for less than 20% of Gaoping River's sediment load. The calculated budget, coupled with the presence of the short-lived 7Be and non-steady-state distribution of low levels of 210Pb in sediments along the canyon floor, suggests rapid transport of sediment from Gaoping River's mountainous watershed (the source) via the Gaoping (Kaoping) Submarine Canyon and adjacent channels (as the conduit and temporary sink) to the abyssal plain and the Manila

  18. Investigating the past and recent δ18O-accumulation relationship seen in Greenland ice cores

    NASA Astrophysics Data System (ADS)

    Buchardt, S. L.; Clausen, H. B.; Vinther, B. M.; Dahl-Jensen, D.

    2012-08-01

    Decadal means of δ18O and accumulation rates from 52 ice core sites in Greenland are presented. The accumulation rates are derived from annual layers determined in the δ18O curve. Investigation of the δ18O-accumulation relationship across the ice divide reveals a significant Foehn effect with anticorrelation of δ18O and accumulation on the lee side of the divide in Southern Greenland, while no effect is seen in Central Greenland. Furthermore, the sensitivity of accumulation rate to changes in temperature is found to be smaller in Northern Greenland than in the central and southern parts. Four sites in the data set contain sufficient recent data that the period of observed temperature rise from the 1990's and onwards can be investigated. All four sites are located close to the ice divide in Northern Greenland and while three sites show increased temperatures, none show evidence of increased accumulation.

  19. Total carbon accumulation in a tropical forest landscape

    PubMed Central

    2012-01-01

    Background Regrowing tropical forests worldwide sequester important amounts of carbon and restore part of the C emissions emitted by deforestation. However, there are large uncertainties concerning the rates of carbon accumulation after the abandonment of agricultural and pasture land. We report here accumulation of total carbon stocks (TCS) in a chronosequence of secondary forests at a mid-elevation landscape (900-1200 m asl) in the Andean mountains of Colombia. Results We found positive accumulation rates for all ecosystem pools except soil carbon, which showed no significant trend of recovery after 36 years of secondary succession. We used these data to develop a simple model to predict accumulation of TCS over time. This model performed remarkably well predicting TCS at other chronosequences in the Americas (Root Mean Square Error < 40 Mg C ha-1), which provided an opportunity to explore different assumptions in the calculation of large-scale carbon budgets. Simulations of TCS with our empirical model were used to test three assumptions often made in carbon budgets: 1) the use of carbon accumulation in tree aboveground biomass as a surrogate for accumulation of TCS, 2) the implicit consideration of carbon legacies from previous land-use, and 3) the omission of landscape age in calculating accumulation rates of TCS. Conclusions Our simulations showed that in many situations carbon can be released from regrowing secondary forests depending on the amount of carbon legacies and the average age of the landscape. In most cases, the rates used to predict carbon accumulation in the Americas were above the rates predicted in our simulations. These biome level rates seemed to be realistic only in landscapes not affected by carbon legacies from previous land-use and mean ages of around 10 years. PMID:23249727

  20. Accumulative Tritium Transfer from Water into Biosystems

    SciTech Connect

    Baumgaertner, Franz

    2005-07-15

    The energy balance of hydrogen isotopes in H bonds of water and biomolecules results in accumulative tritium transfer from water into biomolecules. Tests of DNA dissolved in tritiated water and of maize or barley hydroponically grown in tritiated water confirm the increase. The primary hydration shell of DNA shows an accumulation factor of {approx}1.4, and the exchangeable hydrogens inside DNA show {approx}2. Logistic growth analyses of maize and barley reveal the intrinsic growth rates of tritium 1.3 and 1.2 times larger than that of hydrogen. The higher rate of tritium than hydrogen incorporation in solid biomatter is caused by the hydration shells, which constitute an intrinsic component of biomolecules.

  1. Simulations of Methane Hydrate Phenomena Over Geologic Timescales. Part I: Effect of Sediment Compaction Rates on Methans Hydrate and Free Gas Accumulation

    SciTech Connect

    Gering, Kevin Leslie

    2003-01-01

    The focus of this work is a model that describes migration and biogenic formation of methane under conditions representative of dynamic marine basins, and the conversion of soluble methane into either solid hydrate or exsolved gas. Incorporated into the overall model are an accurate phase equilibria model for seawater-methane, a methane source term based on biogenesis data, and a sediment compaction model based on porosity as a function of position, time, and the local volume fractions of hydrate solids and free gas. Simulations have shown that under some compaction scenarios, liquid overpressures reach the lithostatic limit due to permeability constraints, which can diminish the advective transfer of soluble methane within the porous sediment. As such, the formation of methane hydrate can be somewhat of a self-moderating process. The occurrence and magnitude of hydrate formation is directly tied to fundamental parameters such as the compaction/sedimentation rates, liquid advection rates, seafloor depth, geothermal gradient, etc. Results are shown for simulations covering 20 million years, wherein growth profiles for methane hydrate and free gas (neither exceeding 10 vol% at any location) are tracked within a vertical sediment column spanning over 3000 m. A case study is also presented for the Blake Ridge region (Ocean Drilling Program Leg 164, Sites 994, 995, and 997) based on simulations covering 6 Ma, wherein it is concluded that methane migration from compaction-driven advection may account for 15-30% of the total hydrate mass present in this region.

  2. Drivers of Holocene peatland carbon accumulation across a climate gradient in northeastern North America

    NASA Astrophysics Data System (ADS)

    Charman, Dan J.; Amesbury, Matthew J.; Hinchliffe, William; Hughes, Paul D. M.; Mallon, Gunnar; Blake, William H.; Daley, Tim J.; Gallego-Sala, Angela V.; Mauquoy, Dmitri

    2015-08-01

    Peatlands are an important component of the Holocene global carbon (C) cycle and the rate of C sequestration and storage is driven by the balance between net primary productivity and decay. A number of studies now suggest that climate is a key driver of peatland C accumulation at large spatial scales and over long timescales, with warmer conditions associated with higher rates of C accumulation. However, other factors are also likely to play a significant role in determining local carbon accumulation rates and these may modify past, present and future peatland carbon sequestration. Here, we test the importance of climate as a driver of C accumulation, compared with hydrological change, fire, nitrogen content and vegetation type, from records of C accumulation at three sites in northeastern North America, across the N-S climate gradient of raised bog distribution. Radiocarbon age models, bulk density values and %C measurements from each site are used to construct C accumulation histories commencing between 11,200 and 8000 cal. years BP. The relationship between C accumulation and environmental variables (past water table depth, fire, peat forming vegetation and nitrogen content) is assessed with linear and multivariate regression analyses. Differences in long-term rates of carbon accumulation between sites support the contention that a warmer climate with longer growing seasons results in faster rates of long-term carbon accumulation. However, mid-late Holocene accumulation rates show divergent trends, decreasing in the north but rising in the south. We hypothesise that sites close to the moisture threshold for raised bog distribution increased their growth rate in response to a cooler climate with lower evapotranspiration in the late Holocene, but net primary productivity declined over the same period in northern areas causing a decrease in C accumulation. There was no clear relationship between C accumulation and hydrological change, vegetation, nitrogen content

  3. Predicting the accumulation of well-metabolized chemicals by fish from measured rates of in vitro intrinsic clearance: Progress made and challenges ahead

    EPA Science Inventory

    Several groups have extrapolated in vitro metabolism data for fish to the intact animal and used this information as an input to models of chemical bioconcentration. These “proof of concept” studies show that incorporating in vitro metabolism data into the models sub...

  4. Deriving in vivo biotransformation rate constants and metabolite parent concentration factor/stable metabolite factor from bioaccumulation and bioconcentration experiments: An illustration with worm accumulation data.

    PubMed

    Kuo, Dave Ta Fu; Chen, Ciara Chun

    2016-12-01

    Growing concern for the biological fate of organic contaminants and their metabolites and the urge to connect in vitro and in vivo toxicokinetics have prompted researchers to characterize the biotransformation behavior of organic contaminants in biota. The whole body biotransformation rate constant (kM ) is currently determined by the difference approach, which has significant methodological limitations. A new approach for determining kM from the kinetic observations of the parent contaminant and its intermediate metabolites is proposed. In this method, kM can be determined by fitting kinetic data of the parent contaminant and the metabolites to analytical equations that depict the bioaccumulation kinetics. The application of the proposed method is illustrated using worm bioaccumulation-biotransformation data collected from the literature. Furthermore, a metabolite parent concentration factor (MPCF) is also proposed to characterize the persistence of the metabolite in biota. Because both the proposed kM method and MPCF build on the existing theoretical framework for bioaccumulation, they can be readily incorporated into standard experimental bioaccumulation protocols or risk assessment procedures or frameworks. Possible limitations, implications, and future directions are elaborated. Environ Toxicol Chem 2016;35:2903-2909. © 2016 SETAC.

  5. Noise Reduction by Signal Accumulation

    ERIC Educational Resources Information Center

    Kraftmakher, Yaakov

    2006-01-01

    The aim of this paper is to show how the noise reduction by signal accumulation can be accomplished with a data acquisition system. This topic can be used for student projects. In many cases, the noise reduction is an unavoidable part of experimentation. Several techniques are known for this purpose, and among them the signal accumulation is the…

  6. Strain accumulation in quasicrystalline solids

    NASA Technical Reports Server (NTRS)

    Nori, Franco; Ronchetti, Marco; Elser, Veit

    1988-01-01

    The relaxation of two-dimensional quasicrystalline elastic networks when their constituent bonds are perturbed homogeneously is studied. Whereas ideal, quasi-periodic networks are stable against such perturbations, significant accumulations of strain in a class of disordered networks generated by a growth process are found. The grown networks are characterized by root mean square phason fluctuations which grow linearly with system size. The strain accumulation observed in these networks also grows linearly with system size. Finally, dependence of strain accumulation on cooling rate is found.

  7. Selenium accumulation by plants

    PubMed Central

    White, Philip J.

    2016-01-01

    Background Selenium (Se) is an essential mineral element for animals and humans, which they acquire largely from plants. The Se concentration in edible plants is determined by the Se phytoavailability in soils. Selenium is not an essential element for plants, but excessive Se can be toxic. Thus, soil Se phytoavailability determines the ecology of plants. Most plants cannot grow on seleniferous soils. Most plants that grow on seleniferous soils accumulate <100 mg Se kg–1 dry matter and cannot tolerate greater tissue Se concentrations. However, some plant species have evolved tolerance to Se, and commonly accumulate tissue Se concentrations >100 mg Se kg–1 dry matter. These plants are considered to be Se accumulators. Some species can even accumulate Se concentrations of 1000–15 000 mg Se kg–1 dry matter and are called Se hyperaccumulators. Scope This article provides an overview of Se uptake, translocation and metabolism in plants and highlights the possible genetic basis of differences in these between and within plant species. The review focuses initially on adaptations allowing plants to tolerate large Se concentrations in their tissues and the evolutionary origin of species that hyperaccumulate Se. It then describes the variation in tissue Se concentrations between and within angiosperm species and identifies genes encoding enzymes limiting the rates of incorporation of Se into organic compounds and chromosomal loci that might enable the development of crops with greater Se concentrations in their edible portions. Finally, it discusses transgenic approaches enabling plants to tolerate greater Se concentrations in the rhizosphere and in their tissues. Conclusions The trait of Se hyperaccumulation has evolved several times in separate angiosperm clades. The ability to tolerate large tissue Se concentrations is primarily related to the ability to divert Se away from the accumulation of selenocysteine and selenomethionine, which might be incorporated

  8. Purification and partial kinetic and physical characterization of two NADP-specific glutamate dehydrogenase isoenzymes and their protein precursors, and measurement of the patterns of accumulation and rates of degradation of their nonidentical subunits in synchronized cells of Chlorella cultured in different concentrations of ammonia

    SciTech Connect

    Bascomb, N.F.

    1986-01-01

    Two ammonium-inducible, chloroplast-localized, NADP-specific glutamate dehydrogenases were purified from Chlorella sorokiniana. They were homopolymers of either alpha or beta subunits with molecular weights of 55,500 and 53,000, respectively. These isoenzymes were separated by their differential binding to the substrate affinity column. Peptide mapping of purified alpha and beta subunits showed them to have a high degree of sequence homology. By use of SDS slab-gel electrophoresis and a Western blot/immunodetection procedure, patterns of accumulation of alpha and beta subunits (in their holoenzyme) were measured in cells cultured in media, containing different concentrations of ammonia. Pulse-chase experiments with (/sup 35/S)sulfate were performed to measured the rates of degradation of the two isoenzymes. When the culture medium contained 2 mM ammonia or lower, cells accumulated only the alpha holoenzyme. Above 2 mM ammonia, cells contained both enzymes; however, their patterns of accumulation and rates of degradation were very different. The physiological role of alpha and beta holoenzymes appears to be ammonia assimilation at low and high external ammonia concentrations, respectively. From in vitro-translation studies with total cellular poly(A)/sup +/RNA, isolated from cells engaged in synthesis of alpha or beta holoenzymes or both, it was concluded that alpha and beta subunits have protein precursor(s) or identical molecular weight (M/sub r/ = 58,500). When the putative protein-precursor(s) were incubated in vitro, with cell-free extracts from Chlorella cells, they were processed to proteins the size of alpha and beta subunits.

  9. HPLC-MS/MS analyses show that the near-Starchless aps1 and pgm leaves accumulate wild type levels of ADPglucose: further evidence for the occurrence of important ADPglucose biosynthetic pathway(s) alternative to the pPGI-pPGM-AGP pathway.

    PubMed

    Bahaji, Abdellatif; Baroja-Fernández, Edurne; Sánchez-López, Angela María; Muñoz, Francisco José; Li, Jun; Almagro, Goizeder; Montero, Manuel; Pujol, Pablo; Galarza, Regina; Kaneko, Kentaro; Oikawa, Kazusato; Wada, Kaede; Mitsui, Toshiaki; Pozueta-Romero, Javier

    2014-01-01

    In leaves, it is widely assumed that starch is the end-product of a metabolic pathway exclusively taking place in the chloroplast that (a) involves plastidic phosphoglucomutase (pPGM), ADPglucose (ADPG) pyrophosphorylase (AGP) and starch synthase (SS), and (b) is linked to the Calvin-Benson cycle by means of the plastidic phosphoglucose isomerase (pPGI). This view also implies that AGP is the sole enzyme producing the starch precursor molecule, ADPG. However, mounting evidence has been compiled pointing to the occurrence of important sources, other than the pPGI-pPGM-AGP pathway, of ADPG. To further explore this possibility, in this work two independent laboratories have carried out HPLC-MS/MS analyses of ADPG content in leaves of the near-starchless pgm and aps1 mutants impaired in pPGM and AGP, respectively, and in leaves of double aps1/pgm mutants grown under two different culture conditions. We also measured the ADPG content in wild type (WT) and aps1 leaves expressing in the plastid two different ADPG cleaving enzymes, and in aps1 leaves expressing in the plastid GlgC, a bacterial AGP. Furthermore, we measured the ADPG content in ss3/ss4/aps1 mutants impaired in starch granule initiation and chloroplastic ADPG synthesis. We found that, irrespective of their starch contents, pgm and aps1 leaves, WT and aps1 leaves expressing in the plastid ADPG cleaving enzymes, and aps1 leaves expressing in the plastid GlgC accumulate WT ADPG content. In clear contrast, ss3/ss4/aps1 leaves accumulated ca. 300 fold-more ADPG than WT leaves. The overall data showed that, in Arabidopsis leaves, (a) there are important ADPG biosynthetic pathways, other than the pPGI-pPGM-AGP pathway, (b) pPGM and AGP are not major determinants of intracellular ADPG content, and (c) the contribution of the chloroplastic ADPG pool to the total ADPG pool is low.

  10. Response times from ensembles of accumulators

    PubMed Central

    Zandbelt, Bram; Purcell, Braden A.; Palmeri, Thomas J.; Logan, Gordon D.; Schall, Jeffrey D.

    2014-01-01

    Decision-making is explained by psychologists through stochastic accumulator models and by neurophysiologists through the activity of neurons believed to instantiate these models. We investigated an overlooked scaling problem: How does a response time (RT) that can be explained by a single model accumulator arise from numerous, redundant accumulator neurons, each of which individually appears to explain the variability of RT? We explored this scaling problem by developing a unique ensemble model of RT, called e pluribus unum, which embodies the well-known dictum “out of many, one.” We used the e pluribus unum model to analyze the RTs produced by ensembles of redundant, idiosyncratic stochastic accumulators under various termination mechanisms and accumulation rate correlations in computer simulations of ensembles of varying size. We found that predicted RT distributions are largely invariant to ensemble size if the accumulators share at least modestly correlated accumulation rates and RT is not governed by the most extreme accumulators. Under these regimes the termination times of individual accumulators was predictive of ensemble RT. We also found that the threshold measured on individual accumulators, corresponding to the firing rate of neurons measured at RT, can be invariant with RT but is equivalent to the specified model threshold only when the rate correlation is very high. PMID:24550315

  11. K(+) accumulation in the cytoplasm and nucleus of the salt gland cells of Limonium bicolor accompanies increased rates of salt secretion under NaCl treatment using NanoSIMS.

    PubMed

    Feng, Zhong-Tao; Deng, Yun-Quan; Zhang, Shi-Chao; Liang, Xue; Yuan, Fang; Hao, Jia-Long; Zhang, Jian-Chao; Sun, Shu-Feng; Wang, Bao-Shan

    2015-09-01

    Recretohalophytes with specialized salt-secreting structures (salt glands) can secrete excess salts from plant, while discriminating between Na(+) and K(+). K(+)/Na(+) ratio plays an important role in plant salt tolerance, but the distribution and role of K(+) in the salt gland cells is poorly understood. In this article, the in situ subcellular localization of K and Na in the salt gland of the recretohalophyte Limonium bicolor Kuntze is described. Samples were prepared by high-pressure freezing (HPF), freeze substitution (FS) and analyzed using NanoSIMS. The salt gland of L. bicolor consists of sixteen cells. Higher signal strength of Na(+) was located in the apoplast of salt gland cells. Compared with control, 200 mM NaCl treatment led to higher signal strength of K(+) and Na(+) in both cytoplasm and nucleus of salt gland cells although K(+)/Na(+) ratio in both cytoplasm and nucleus were slightly reduced by NaCl. Moreover, the rate of Na(+) secretion per salt gland of L. bicolor treated with 200 mM NaCl was five times that of controls. These results suggest that K(+) accumulation both in the cytoplasm and nucleus of salt gland cells under salinity may play an important role in salt secretion, although the exact mechanism is unknown.

  12. N₂O accumulation from denitrification under different temperatures.

    PubMed

    Poh, Leong Soon; Jiang, Xie; Zhang, Zhongbo; Liu, Yu; Ng, Wun Jern; Zhou, Yan

    2015-11-01

    The effects of temperature on nitrous oxide (N2O) accumulation during denitrification and denitritation were investigated. Batch experiments were performed to measure N2O accumulation at 25 and 35 °C. More N2O accumulation was observed during denitritation at the higher temperature as compared with full denitrification and low temperature tests. The highest nitrite concentration tested in this study (25 mg/L NO2 (-)N and pH 8.0) did not show inhibitory effect on N2O reduction. It was found that the major cause of more N2O accumulation during denitrification at higher temperature was due to higher N2O production rate and lower N2O solubility. Specific nitrate, nitrite, and N2O reduction rates increased 62, 61, and 41 %, respectively, when temperature rose from 25 to 35 °C. The decrease of N2O solubility in mixed liquor at 35 °C (when compared to 25 °C) resulted in faster diffusing rate of N2O from liquid to gas phase. It was also more difficult for gas phase N2O to be re-dissolved. The diffused N2O was then accumulated in the headspace, which was not available for denitrification by denitrifiers. The results of this study suggest higher temperature may worsen N2O emission from wastewater treatment plants (WWTPs).

  13. Surface-atmosphere decoupling limits accumulation at Summit, Greenland.

    PubMed

    Berkelhammer, Max; Noone, David C; Steen-Larsen, Hans Christian; Bailey, Adriana; Cox, Christopher J; O'Neill, Michael S; Schneider, David; Steffen, Konrad; White, James W C

    2016-04-01

    Despite rapid melting in the coastal regions of the Greenland Ice Sheet, a significant area (~40%) of the ice sheet rarely experiences surface melting. In these regions, the controls on annual accumulation are poorly constrained owing to surface conditions (for example, surface clouds, blowing snow, and surface inversions), which render moisture flux estimates from myriad approaches (that is, eddy covariance, remote sensing, and direct observations) highly uncertain. Accumulation is partially determined by the temperature dependence of saturation vapor pressure, which influences the maximum humidity of air parcels reaching the ice sheet interior. However, independent proxies for surface temperature and accumulation from ice cores show that the response of accumulation to temperature is variable and not generally consistent with a purely thermodynamic control. Using three years of stable water vapor isotope profiles from a high altitude site on the Greenland Ice Sheet, we show that as the boundary layer becomes increasingly stable, a decoupling between the ice sheet and atmosphere occurs. The limited interaction between the ice sheet surface and free tropospheric air reduces the capacity for surface condensation to achieve the rate set by the humidity of the air parcels reaching interior Greenland. The isolation of the surface also acts to recycle sublimated moisture by recondensing it onto fog particles, which returns the moisture back to the surface through gravitational settling. The observations highlight a unique mechanism by which ice sheet mass is conserved, which has implications for understanding both past and future changes in accumulation rate and the isotopic signal in ice cores from Greenland.

  14. Positive effects of duckweed polycultures on starch and protein accumulation.

    PubMed

    Li, Yang; Zhang, Fantao; Daroch, Maurycy; Tang, Jie

    2016-10-01

    The effect of duckweed species composition (Lemna aequinoctialis 5505, Landoltia punctata 5506 and Spirodela polyrhiza 5507) in polyculture and monoculture on biomass and starch/protein content were investigated at different levels of temperature, light intensity, nitrogen and phosphorus concentrations. The three growth parameters significantly affect duckweed biomass accumulation. Different combinations of duckweed species greatly varied in starch/protein content. Although all the polycultures showed a median relative growth rate and the majority of the polycultures showed a median and starch/protein content as compared with their respective monocultures, some of the polycultures were found to promote the accumulation of starch/protein at different growth conditions. These findings indicated that proper combination of duckweed species could facilitate desirable biomass accumulation and improve biomass quality. The present study provides useful references for future large-scale duckweed cultivation.

  15. Positive effects of duckweed polycultures on starch and protein accumulation

    PubMed Central

    Li, Yang; Zhang, Fantao; Daroch, Maurycy; Tang, Jie

    2016-01-01

    The effect of duckweed species composition (Lemna aequinoctialis 5505, Landoltia punctata 5506 and Spirodela polyrhiza 5507) in polyculture and monoculture on biomass and starch/protein content were investigated at different levels of temperature, light intensity, nitrogen and phosphorus concentrations. The three growth parameters significantly affect duckweed biomass accumulation. Different combinations of duckweed species greatly varied in starch/protein content. Although all the polycultures showed a median relative growth rate and the majority of the polycultures showed a median and starch/protein content as compared with their respective monocultures, some of the polycultures were found to promote the accumulation of starch/protein at different growth conditions. These findings indicated that proper combination of duckweed species could facilitate desirable biomass accumulation and improve biomass quality. The present study provides useful references for future large-scale duckweed cultivation. PMID:27515418

  16. 19 CFR 10.534 - Accumulation.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Singapore Free Trade Agreement Rules of Origin § 10.534 Accumulation. (a) Originating materials of Singapore or the United States...

  17. 19 CFR 10.534 - Accumulation.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Singapore Free Trade Agreement Rules of Origin § 10.534 Accumulation. (a) Originating materials of Singapore or the United States...

  18. 19 CFR 10.534 - Accumulation.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Singapore Free Trade Agreement Rules of Origin § 10.534 Accumulation. (a) Originating materials of Singapore or the United States...

  19. 19 CFR 10.534 - Accumulation.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Singapore Free Trade Agreement Rules of Origin § 10.534 Accumulation. (a) Originating materials of Singapore or the United States...

  20. 19 CFR 10.534 - Accumulation.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Singapore Free Trade Agreement Rules of Origin § 10.534 Accumulation. (a) Originating materials of Singapore or the United States...

  1. Multiple anatomy optimization of accumulated dose

    SciTech Connect

    Watkins, W. Tyler Siebers, Jeffrey V.; Moore, Joseph A.; Gordon, James; Hugo, Geoffrey D.

    2014-11-01

    Purpose: To investigate the potential advantages of multiple anatomy optimization (MAO) for lung cancer radiation therapy compared to the internal target volume (ITV) approach. Methods: MAO aims to optimize a single fluence to be delivered under free-breathing conditions such that the accumulated dose meets the plan objectives, where accumulated dose is defined as the sum of deformably mapped doses computed on each phase of a single four dimensional computed tomography (4DCT) dataset. Phantom and patient simulation studies were carried out to investigate potential advantages of MAO compared to ITV planning. Through simulated delivery of the ITV- and MAO-plans, target dose variations were also investigated. Results: By optimizing the accumulated dose, MAO shows the potential to ensure dose to the moving target meets plan objectives while simultaneously reducing dose to organs at risk (OARs) compared with ITV planning. While consistently superior to the ITV approach, MAO resulted in equivalent OAR dosimetry at planning objective dose levels to within 2% volume in 14/30 plans and to within 3% volume in 19/30 plans for each lung V20, esophagus V25, and heart V30. Despite large variations in per-fraction respiratory phase weights in simulated deliveries at high dose rates (e.g., treating 4/10 phases during single fraction beams) the cumulative clinical target volume (CTV) dose after 30 fractions and per-fraction dose were constant independent of planning technique. In one case considered, however, per-phase CTV dose varied from 74% to 117% of prescription implying the level of ITV-dose heterogeneity may not be appropriate with conventional, free-breathing delivery. Conclusions: MAO incorporates 4DCT information in an optimized dose distribution and can achieve a superior plan in terms of accumulated dose to the moving target and OAR sparing compared to ITV-plans. An appropriate level of dose heterogeneity in MAO plans must be further investigated.

  2. Rhizosphere Bacteria Enhance Selenium Accumulation and Volatilization by Indian Mustard1

    PubMed Central

    de Souza, Mark P.; Chu, Dara; Zhao, May; Zayed, Adel M.; Ruzin, Steven E.; Schichnes, Denise; Terry, Norman

    1999-01-01

    Indian mustard (Brassica juncea L.) accumulates high tissue Se concentrations and volatilizes Se in relatively nontoxic forms, such as dimethylselenide. This study showed that the presence of bacteria in the rhizosphere of Indian mustard was necessary to achieve the best rates of plant Se accumulation and volatilization of selenate. Experiments with the antibiotic ampicillin showed that bacteria facilitated 35% of plant Se volatilization and 70% of plant tissue accumulation. These results were confirmed by inoculating axenic plants with rhizosphere bacteria. Compared with axenic controls, plants inoculated with rhizosphere bacteria had 5-fold higher Se concentrations in roots (the site of volatilization) and 4-fold higher rates of Se volatilization. Plants with bacteria contained a heat-labile compound in their root exudate; when this compound was added to the rhizosphere of axenic plants, Se accumulation in plant tissues increased. Plants with bacteria had an increased root surface area compared with axenic plants; the increased area was unlikely to have caused their increased tissue Se accumulation because they did not accumulate more Se when supplied with selenite or selenomethionine. Rhizosphere bacteria also possibly increased plant Se volatilization because they enabled plants to overcome a rate-limiting step in the Se volatilization pathway, i.e. Se accumulation in plant tissues. PMID:9952452

  3. Television Quiz Show Simulation

    ERIC Educational Resources Information Center

    Hill, Jonnie Lynn

    2007-01-01

    This article explores the simulation of four television quiz shows for students in China studying English as a foreign language (EFL). It discusses the adaptation and implementation of television quiz shows and how the students reacted to them.

  4. Ice core evidence for a recent increase in snow accumulation in coastal Dronning Maud Land, Antarctica

    NASA Astrophysics Data System (ADS)

    Philippe, Morgane; Tison, Jean-Louis; Fjøsne, Karen; Hubbard, Bryn; Kjær, Helle Astrid; Lenaerts, Jan; Sheldon, Simon Geoffrey; De Bondt, Kevin; Claeys, Philippe; Pattyn, Frank

    2016-04-01

    Ice cores provide temporal records of snow accumulation, a crucial component of Antarctic mass balance. Coastal areas are particularly under-represented in such records, despite their relatively high and sensitive accumulation rates. Here we present records from a 120 m ice core drilled on Derwael Ice Rise, coastal Dronning Maud Land (DML), East Antarctica in 2012. We date the ice core bottom back to 1745 ± 2 AD. δ18O and δD stratigraphy is supplemented by discontinuous major ion profiles, and verified independently by electrical conductivity measurements (ECM) to detect volcanic horizons. The resulting annual layer history is combined with the core density profile to calculate accumulation history, corrected for the influence of ice deformation. The mean long-term accumulation is 0.425 ± 0.035 m water equivalent (w.e.) a-1 (average corrected value). Reconstructed annual accumulation rates show an increase from 1955 onward to a mean value of 0.61 ± 0.02 m w.e. a-1 between 1955 and 2012. This trend is compared to other reported accumulation data in Antarctica, generally showing a high spatial variability. Applying the Community Earth System Model demonstrated that sea ice and atmosphere patterns largely explain the accumulation variability. This is the first and longest record from a coastal ice core in East Antarctica showing a steady increase during the 20th and 21st centuries, thereby confirming modelling predictions.

  5. Cystinosis (ctns) zebrafish mutant shows pronephric glomerular and tubular dysfunction

    PubMed Central

    Elmonem, Mohamed A.; Khalil, Ramzi; Khodaparast, Ladan; Khodaparast, Laleh; Arcolino, Fanny O.; Morgan, Joseph; Pastore, Anna; Tylzanowski, Przemko; Ny, Annelii; Lowe, Martin; de Witte, Peter A.; Baelde, Hans J.; van den Heuvel, Lambertus P.; Levtchenko, Elena

    2017-01-01

    The human ubiquitous protein cystinosin is responsible for transporting the disulphide amino acid cystine from the lysosomal compartment into the cytosol. In humans, Pathogenic mutations of CTNS lead to defective cystinosin function, intralysosomal cystine accumulation and the development of cystinosis. Kidneys are initially affected with generalized proximal tubular dysfunction (renal Fanconi syndrome), then the disease rapidly affects glomeruli and progresses towards end stage renal failure and multiple organ dysfunction. Animal models of cystinosis are limited, with only a Ctns knockout mouse reported, showing cystine accumulation and late signs of tubular dysfunction but lacking the glomerular phenotype. We established and characterized a mutant zebrafish model with a homozygous nonsense mutation (c.706 C > T; p.Q236X) in exon 8 of ctns. Cystinotic mutant larvae showed cystine accumulation, delayed development, and signs of pronephric glomerular and tubular dysfunction mimicking the early phenotype of human cystinotic patients. Furthermore, cystinotic larvae showed a significantly increased rate of apoptosis that could be ameliorated with cysteamine, the human cystine depleting therapy. Our data demonstrate that, ctns gene is essential for zebrafish pronephric podocyte and proximal tubular function and that the ctns-mutant can be used for studying the disease pathogenic mechanisms and for testing novel therapies for cystinosis. PMID:28198397

  6. Investigating the past and recent δ18O-accumulation relationship seen in Greenland ice cores

    NASA Astrophysics Data System (ADS)

    Buchardt, S. L.; Clausen, H. B.; Vinther, B. M.; Dahl-Jensen, D.

    2012-12-01

    Decadal means of δ18O and accumulation rates from 52 ice core locations in Greenland are presented. The accumulation rates are derived from annual layers determined in the δ18O curve. Investigation of the δ18O-accumulation relationship across the ice divide reveals a significant Foehn effect with anticorrelation of δ18O and accumulation rate on the lee side of the divide in Southern Greenland, while no effect is seen in Central Greenland. Furthermore, the sensitivity of accumulation rate to changes in temperature is found to be smaller in Northern Greenland than in the central and southern parts. Four records in the data set contain sufficient recent data that the period of observed temperature rise from the 1990s and onwards can be investigated. All four records are from locations close to the ice divide in Northern Greenland and while three of them show increased temperatures, no conclusive statement can be made about the accumulation rate from these data.

  7. Initial rate kinetic studies show an unexpected influence of para-substituents on the catalytic behaviour of manganese complexes of TMTACN in the epoxidation of styrenes with H2O2.

    PubMed

    Ilyashenko, Gennadiy; De Faveri, Giorgio; Masoudi, Shirin; Al-Safadi, Rawan; Watkinson, Michael

    2013-03-28

    Investigations into the efficacy of a range of enantiomerically pure BINOL additives in the epoxidation of styrene substrates with a number of manganese catalysts prepared from the ligand 1,4,7-trimethyl-1,4,7-triazacyclononane, TMTACN, using hydrogen peroxide as the oxidant have revealed that there are fundamental differences in reactivity between apparently similar systems. Whilst no asymmetric induction was obtained in the styrene oxide products formed, the data obtained from initial rate kinetic studies appear to be consistent with a number of different catalytically active species operating, the nature of which are profoundly affected by the starting materials used.

  8. Showing What They Know

    ERIC Educational Resources Information Center

    Cech, Scott J.

    2008-01-01

    Having students show their skills in three dimensions, known as performance-based assessment, dates back at least to Socrates. Individual schools such as Barrington High School--located just outside of Providence--have been requiring students to actively demonstrate their knowledge for years. The Rhode Island's high school graduating class became…

  9. The Ozone Show.

    ERIC Educational Resources Information Center

    Mathieu, Aaron

    2000-01-01

    Uses a talk show activity for a final assessment tool for students to debate about the ozone hole. Students are assessed on five areas: (1) cooperative learning; (2) the written component; (3) content; (4) self-evaluation; and (5) peer evaluation. (SAH)

  10. What Do Maps Show?

    ERIC Educational Resources Information Center

    Geological Survey (Dept. of Interior), Reston, VA.

    This curriculum packet, appropriate for grades 4-8, features a teaching poster which shows different types of maps (different views of Salt Lake City, Utah), as well as three reproducible maps and reproducible activity sheets which complement the maps. The poster provides teacher background, including step-by-step lesson plans for four geography…

  11. Show Me the Way

    ERIC Educational Resources Information Center

    Dicks, Matthew J.

    2005-01-01

    Because today's students have grown up steeped in video games and the Internet, most of them expect feedback, and usually gratification, very soon after they expend effort on a task. Teachers can get quick feedback to students by showing them videotapes of their learning performances. The author, a 3rd grade teacher describes how the seemingly…

  12. Chemistry Game Shows

    NASA Astrophysics Data System (ADS)

    Campbell, Susan; Muzyka, Jennifer

    2002-04-01

    We present a technological improvement to the use of game shows to help students review for tests. Our approach uses HTML files interpreted with a browser on a computer attached to an LCD projector. The HTML files can be easily modified for use of the game in a variety of courses.

  13. Honored Teacher Shows Commitment.

    ERIC Educational Resources Information Center

    Ratte, Kathy

    1987-01-01

    Part of the acceptance speech of the 1985 National Council for the Social Studies Teacher of the Year, this article describes the censorship experience of this honored social studies teacher. The incident involved the showing of a videotape version of the feature film entitled "The Seduction of Joe Tynan." (JDH)

  14. Talk Show Science.

    ERIC Educational Resources Information Center

    Moore, Mitzi Ruth

    1992-01-01

    Proposes having students perform skits in which they play the roles of the science concepts they are trying to understand. Provides the dialog for a skit in which hot and cold gas molecules are interviewed on a talk show to study how these properties affect wind, rain, and other weather phenomena. (MDH)

  15. Stage a Water Show

    ERIC Educational Resources Information Center

    Frasier, Debra

    2008-01-01

    In the author's book titled "The Incredible Water Show," the characters from "Miss Alaineus: A Vocabulary Disaster" used an ocean of information to stage an inventive performance about the water cycle. In this article, the author relates how she turned the story into hands-on science teaching for real-life fifth-grade students. The author also…

  16. Pre-eruptive inflation caused by gas accumulation: Insight from detailed gas flux variation at Sakurajima volcano, Japan

    NASA Astrophysics Data System (ADS)

    Kazahaya, Ryunosuke; Shinohara, Hiroshi; Mori, Toshiya; Iguchi, Masato; Yokoo, Akihiko

    2016-11-01

    Sulfur dioxide (SO2) emission rate observations were made at Sakurajima volcano, Japan, to quantify the relationship between the SO2 emission rate and inflation prior to Vulcanian explosions. The explosions associated with precursory inflation events were preceded by decreases in SO2 emission rates by 10-60 min. The amounts of accumulated gas were calculated using time series of SO2 emission rate. The amounts of accumulated SO2 and increases in strain records before the explosions showed a positive correlation. The volume increase of a deformation source calculated using the strain records was of the comparable order of magnitude as the volume of the accumulated volcanic gas. The results suggest that the inflations before the explosions were caused by the gas accumulation.

  17. Evidence that accumulation of mutants in a biofilm reflects natural selection rather than stress-induced adaptive mutation.

    PubMed

    Banas, Jeffrey A; Miller, Justin D; Fuschino, Meghan E; Hazlett, Karsten R O; Toyofuku, Wendy; Porter, Kristen A; Reutzel, Sarah B; Florczyk, Matthew A; McDonough, Kathleen A; Michalek, Suzanne M

    2007-01-01

    The accumulation of mutant genotypes within a biofilm evokes the controversy over whether the biofilm environment induces adaptive mutation or whether the accumulation can be explained by natural selection. A comparison of the virulence of two strains of the dental pathogen Streptococcus mutans showed that rats infected with one of the strains accumulated a high proportion (average, 22%) of organisms that had undergone a deletion between two contiguous and highly homologous genes. To determine if the accumulation of deletion mutants was due to selection or to an increased mutation rate, accumulations of deletion mutants within in vitro planktonic and biofilm cultures and within rats inoculated with various proportions of deletion organisms were quantified. We report here that natural selection was the primary force behind the accumulation of the deletion mutants.

  18. Not a "reality" show.

    PubMed

    Wrong, Terence; Baumgart, Erica

    2013-01-01

    The authors of the preceding articles raise legitimate questions about patient and staff rights and the unintended consequences of allowing ABC News to film inside teaching hospitals. We explain why we regard their fears as baseless and not supported by what we heard from individuals portrayed in the filming, our decade-long experience making medical documentaries, and the full un-aired context of the scenes shown in the broadcast. The authors don't and can't know what conversations we had, what documents we reviewed, and what protections we put in place in each televised scene. Finally, we hope to correct several misleading examples cited by the authors as well as their offhand mischaracterization of our program as a "reality" show.

  19. Surface-atmosphere decoupling limits accumulation at Summit, Greenland

    PubMed Central

    Berkelhammer, Max; Noone, David C.; Steen-Larsen, Hans Christian; Bailey, Adriana; Cox, Christopher J.; O’Neill, Michael S.; Schneider, David; Steffen, Konrad; White, James W. C.

    2016-01-01

    Despite rapid melting in the coastal regions of the Greenland Ice Sheet, a significant area (~40%) of the ice sheet rarely experiences surface melting. In these regions, the controls on annual accumulation are poorly constrained owing to surface conditions (for example, surface clouds, blowing snow, and surface inversions), which render moisture flux estimates from myriad approaches (that is, eddy covariance, remote sensing, and direct observations) highly uncertain. Accumulation is partially determined by the temperature dependence of saturation vapor pressure, which influences the maximum humidity of air parcels reaching the ice sheet interior. However, independent proxies for surface temperature and accumulation from ice cores show that the response of accumulation to temperature is variable and not generally consistent with a purely thermodynamic control. Using three years of stable water vapor isotope profiles from a high altitude site on the Greenland Ice Sheet, we show that as the boundary layer becomes increasingly stable, a decoupling between the ice sheet and atmosphere occurs. The limited interaction between the ice sheet surface and free tropospheric air reduces the capacity for surface condensation to achieve the rate set by the humidity of the air parcels reaching interior Greenland. The isolation of the surface also acts to recycle sublimated moisture by recondensing it onto fog particles, which returns the moisture back to the surface through gravitational settling. The observations highlight a unique mechanism by which ice sheet mass is conserved, which has implications for understanding both past and future changes in accumulation rate and the isotopic signal in ice cores from Greenland. PMID:27386509

  20. Strain patterns and strain accumulation along plate margins

    NASA Technical Reports Server (NTRS)

    Savage, J. C.

    1978-01-01

    Observations of strain accumulation along plate margins in Japan, New Zealand, and the United States indicate that: (1) a typical maximum rate of secular strain accumulation is on the order of 0.3 ppm/a, (2) a substantial part of the strain accumulation process can be attributed to slip at depth on the major plate boundary faults, and (3) some plastic deformation in a zone 100 km or more in width is apparently involved in the strain accumulation process.

  1. Public medical shows.

    PubMed

    Walusinski, Olivier

    2014-01-01

    In the second half of the 19th century, Jean-Martin Charcot (1825-1893) became famous for the quality of his teaching and his innovative neurological discoveries, bringing many French and foreign students to Paris. A hunger for recognition, together with progressive and anticlerical ideals, led Charcot to invite writers, journalists, and politicians to his lessons, during which he presented the results of his work on hysteria. These events became public performances, for which physicians and patients were transformed into actors. Major newspapers ran accounts of these consultations, more like theatrical shows in some respects. The resultant enthusiasm prompted other physicians in Paris and throughout France to try and imitate them. We will compare the form and substance of Charcot's lessons with those given by Jules-Bernard Luys (1828-1897), Victor Dumontpallier (1826-1899), Ambroise-Auguste Liébault (1823-1904), Hippolyte Bernheim (1840-1919), Joseph Grasset (1849-1918), and Albert Pitres (1848-1928). We will also note their impact on contemporary cinema and theatre.

  2. Bacterial accumulation in viscosity gradients

    NASA Astrophysics Data System (ADS)

    Waisbord, Nicolas; Guasto, Jeffrey

    2016-11-01

    Cell motility is greatly modified by fluid rheology. In particular, the physical environments in which cells function, are often characterized by gradients of viscous biopolymers, such as mucus and extracellular matrix, which impact processes ranging from reproduction to digestion to biofilm formation. To understand how spatial heterogeneity of fluid rheology affects the motility and transport of swimming cells, we use hydrogel microfluidic devices to generate viscosity gradients in a simple, polymeric, Newtonian fluid. Using video microscopy, we characterize the random walk motility patterns of model bacteria (Bacillus subtilis), showing that both wild-type ('run-and-tumble') cells and smooth-swimming mutants accumulate in the viscous region of the fluid. Through statistical analysis of individual cell trajectories and body kinematics in both homogeneous and heterogeneous viscous environments, we discriminate passive, physical effects from active sensing processes to explain the observed cell accumulation at the ensemble level.

  3. The Great Cometary Show

    NASA Astrophysics Data System (ADS)

    2007-01-01

    its high spatial and spectral resolution, it was possible to zoom into the very heart of this very massive star. In this innermost region, the observations are dominated by the extremely dense stellar wind that totally obscures the underlying central star. The AMBER observations show that this dense stellar wind is not spherically symmetric, but exhibits a clearly elongated structure. Overall, the AMBER observations confirm that the extremely high mass loss of Eta Carinae's massive central star is non-spherical and much stronger along the poles than in the equatorial plane. This is in agreement with theoretical models that predict such an enhanced polar mass-loss in the case of rapidly rotating stars. ESO PR Photo 06c/07 ESO PR Photo 06c/07 RS Ophiuchi in Outburst Several papers from this special feature focus on the later stages in a star's life. One looks at the binary system Gamma 2 Velorum, which contains the closest example of a star known as a Wolf-Rayet. A single AMBER observation allowed the astronomers to separate the spectra of the two components, offering new insights in the modeling of Wolf-Rayet stars, but made it also possible to measure the separation between the two stars. This led to a new determination of the distance of the system, showing that previous estimates were incorrect. The observations also revealed information on the region where the winds from the two stars collide. The famous binary system RS Ophiuchi, an example of a recurrent nova, was observed just 5 days after it was discovered to be in outburst on 12 February 2006, an event that has been expected for 21 years. AMBER was able to detect the extension of the expanding nova emission. These observations show a complex geometry and kinematics, far from the simple interpretation of a spherical fireball in extension. AMBER has detected a high velocity jet probably perpendicular to the orbital plane of the binary system, and allowed a precise and careful study of the wind and the shockwave

  4. Chimpanzee accumulative stone throwing.

    PubMed

    Kühl, Hjalmar S; Kalan, Ammie K; Arandjelovic, Mimi; Aubert, Floris; D'Auvergne, Lucy; Goedmakers, Annemarie; Jones, Sorrel; Kehoe, Laura; Regnaut, Sebastien; Tickle, Alexander; Ton, Els; van Schijndel, Joost; Abwe, Ekwoge E; Angedakin, Samuel; Agbor, Anthony; Ayimisin, Emmanuel Ayuk; Bailey, Emma; Bessone, Mattia; Bonnet, Matthieu; Brazolla, Gregory; Buh, Valentine Ebua; Chancellor, Rebecca; Cipoletta, Chloe; Cohen, Heather; Corogenes, Katherine; Coupland, Charlotte; Curran, Bryan; Deschner, Tobias; Dierks, Karsten; Dieguez, Paula; Dilambaka, Emmanuel; Diotoh, Orume; Dowd, Dervla; Dunn, Andrew; Eshuis, Henk; Fernandez, Rumen; Ginath, Yisa; Hart, John; Hedwig, Daniela; Ter Heegde, Martijn; Hicks, Thurston Cleveland; Imong, Inaoyom; Jeffery, Kathryn J; Junker, Jessica; Kadam, Parag; Kambi, Mohamed; Kienast, Ivonne; Kujirakwinja, Deo; Langergraber, Kevin; Lapeyre, Vincent; Lapuente, Juan; Lee, Kevin; Leinert, Vera; Meier, Amelia; Maretti, Giovanna; Marrocoli, Sergio; Mbi, Tanyi Julius; Mihindou, Vianet; Moebius, Yasmin; Morgan, David; Morgan, Bethan; Mulindahabi, Felix; Murai, Mizuki; Niyigabae, Protais; Normand, Emma; Ntare, Nicolas; Ormsby, Lucy Jayne; Piel, Alex; Pruetz, Jill; Rundus, Aaron; Sanz, Crickette; Sommer, Volker; Stewart, Fiona; Tagg, Nikki; Vanleeuwe, Hilde; Vergnes, Virginie; Willie, Jacob; Wittig, Roman M; Zuberbuehler, Klaus; Boesch, Christophe

    2016-02-29

    The study of the archaeological remains of fossil hominins must rely on reconstructions to elucidate the behaviour that may have resulted in particular stone tools and their accumulation. Comparatively, stone tool use among living primates has illuminated behaviours that are also amenable to archaeological examination, permitting direct observations of the behaviour leading to artefacts and their assemblages to be incorporated. Here, we describe newly discovered stone tool-use behaviour and stone accumulation sites in wild chimpanzees reminiscent of human cairns. In addition to data from 17 mid- to long-term chimpanzee research sites, we sampled a further 34 Pan troglodytes communities. We found four populations in West Africa where chimpanzees habitually bang and throw rocks against trees, or toss them into tree cavities, resulting in conspicuous stone accumulations at these sites. This represents the first record of repeated observations of individual chimpanzees exhibiting stone tool use for a purpose other than extractive foraging at what appear to be targeted trees. The ritualized behavioural display and collection of artefacts at particular locations observed in chimpanzee accumulative stone throwing may have implications for the inferences that can be drawn from archaeological stone assemblages and the origins of ritual sites.

  5. Accumulation of the planets

    NASA Technical Reports Server (NTRS)

    Wetherill, G. W.

    1987-01-01

    In modeling the accumulation of planetesimals into planets, it is appropriate to distinguish between two stages: an early stage, during which approximately 10 km diameter planetesimals accumulate locally to form bodies approximate 10 to the 25th g in mass; and a later stage in which the approximately 10 to the 25th g planetesimals accumulate into the final planets. In the terrestrial planet region, an initial planetesimal swarm corresponding to the critical mass of dust layer gravitational instabilities is considered. In order to better understand the accumulation history of Mercury-sized bodies, 19 Monte-Carlo simulations of terrestrial planet growth were calculated. A Monte Carlo technique was used to investigate the orbital evolution of asteroidal collision debris produced interior to 2.6 AU. It was found that there are two regions primarily responsible for production of Earth-crossing meteoritic material and Apollo objects. The same techniques were extended to include the origin of Earth-approaching asteroidal bodies. It is found that these same two resonant mechanisms predict a steady-state number of Apollo-Amor about 1/2 that estimated based on astronomical observations.

  6. Chimpanzee accumulative stone throwing

    PubMed Central

    Kühl, Hjalmar S.; Kalan, Ammie K.; Arandjelovic, Mimi; Aubert, Floris; D’Auvergne, Lucy; Goedmakers, Annemarie; Jones, Sorrel; Kehoe, Laura; Regnaut, Sebastien; Tickle, Alexander; Ton, Els; van Schijndel, Joost; Abwe, Ekwoge E.; Angedakin, Samuel; Agbor, Anthony; Ayimisin, Emmanuel Ayuk; Bailey, Emma; Bessone, Mattia; Bonnet, Matthieu; Brazolla, Gregory; Buh, Valentine Ebua; Chancellor, Rebecca; Cipoletta, Chloe; Cohen, Heather; Corogenes, Katherine; Coupland, Charlotte; Curran, Bryan; Deschner, Tobias; Dierks, Karsten; Dieguez, Paula; Dilambaka, Emmanuel; Diotoh, Orume; Dowd, Dervla; Dunn, Andrew; Eshuis, Henk; Fernandez, Rumen; Ginath, Yisa; Hart, John; Hedwig, Daniela; Ter Heegde, Martijn; Hicks, Thurston Cleveland; Imong, Inaoyom; Jeffery, Kathryn J.; Junker, Jessica; Kadam, Parag; Kambi, Mohamed; Kienast, Ivonne; Kujirakwinja, Deo; Langergraber, Kevin; Lapeyre, Vincent; Lapuente, Juan; Lee, Kevin; Leinert, Vera; Meier, Amelia; Maretti, Giovanna; Marrocoli, Sergio; Mbi, Tanyi Julius; Mihindou, Vianet; Moebius, Yasmin; Morgan, David; Morgan, Bethan; Mulindahabi, Felix; Murai, Mizuki; Niyigabae, Protais; Normand, Emma; Ntare, Nicolas; Ormsby, Lucy Jayne; Piel, Alex; Pruetz, Jill; Rundus, Aaron; Sanz, Crickette; Sommer, Volker; Stewart, Fiona; Tagg, Nikki; Vanleeuwe, Hilde; Vergnes, Virginie; Willie, Jacob; Wittig, Roman M.; Zuberbuehler, Klaus; Boesch, Christophe

    2016-01-01

    The study of the archaeological remains of fossil hominins must rely on reconstructions to elucidate the behaviour that may have resulted in particular stone tools and their accumulation. Comparatively, stone tool use among living primates has illuminated behaviours that are also amenable to archaeological examination, permitting direct observations of the behaviour leading to artefacts and their assemblages to be incorporated. Here, we describe newly discovered stone tool-use behaviour and stone accumulation sites in wild chimpanzees reminiscent of human cairns. In addition to data from 17 mid- to long-term chimpanzee research sites, we sampled a further 34 Pan troglodytes communities. We found four populations in West Africa where chimpanzees habitually bang and throw rocks against trees, or toss them into tree cavities, resulting in conspicuous stone accumulations at these sites. This represents the first record of repeated observations of individual chimpanzees exhibiting stone tool use for a purpose other than extractive foraging at what appear to be targeted trees. The ritualized behavioural display and collection of artefacts at particular locations observed in chimpanzee accumulative stone throwing may have implications for the inferences that can be drawn from archaeological stone assemblages and the origins of ritual sites. PMID:26923684

  7. Cadmium accumulation and growth response to cadmium stress of eighteen plant species.

    PubMed

    Shi, Gangrong; Xia, Shenglan; Liu, Caifeng; Zhang, Zheng

    2016-11-01

    This study investigated the cadmium (Cd) accumulation and growth response to Cd stress of 18 plant species. After growth for 30 days in the sand containing 0, 2, or 10 mg Cd kg(-1), seedlings were evaluated for growth parameters, specific root length, and Cd accumulation. The 18 species differ greatly in Cd accumulation and resistance to Cd stress, depending on Cd concentrations in the sand. Under high Cd condition (10 mg kg(-1)), the 18 species were classified into two groups: (1) Indian mustard and rapeseed having high Cd tolerance and increased accumulation capacity in shoots could be considered as Cd accumulators, and (2) the remaining 16 non-accumulators constitute a species continuum from the indicators to excluders. Shoot Cd concentration showed exponential decay relationships with biomass production, absolute growth rate, and growth ratio, indicating that biomass production negatively relates to the shoot Cd concentration in non-accumulators via dilution or concentration effect. Species with high biomass generally accumulate low Cd in the shoots and display high Cd-tolerant capacity. Indian mustard and rapeseed are promising species for long-term phytoextraction of Cd-contaminated farmlands for bioenergy production.

  8. Stretched View Showing 'Victoria'

    NASA Technical Reports Server (NTRS)

    2006-01-01

    [figure removed for brevity, see original site] Stretched View Showing 'Victoria'

    This pair of images from the panoramic camera on NASA's Mars Exploration Rover Opportunity served as initial confirmation that the two-year-old rover is within sight of 'Victoria Crater,' which it has been approaching for more than a year. Engineers on the rover team were unsure whether Opportunity would make it as far as Victoria, but scientists hoped for the chance to study such a large crater with their roving geologist. Victoria Crater is 800 meters (nearly half a mile) in diameter, about six times wider than 'Endurance Crater,' where Opportunity spent several months in 2004 examining rock layers affected by ancient water.

    When scientists using orbital data calculated that they should be able to detect Victoria's rim in rover images, they scrutinized frames taken in the direction of the crater by the panoramic camera. To positively characterize the subtle horizon profile of the crater and some of the features leading up to it, researchers created a vertically-stretched image (top) from a mosaic of regular frames from the panoramic camera (bottom), taken on Opportunity's 804th Martian day (April 29, 2006).

    The stretched image makes mild nearby dunes look like more threatening peaks, but that is only a result of the exaggerated vertical dimension. This vertical stretch technique was first applied to Viking Lander 2 panoramas by Philip Stooke, of the University of Western Ontario, Canada, to help locate the lander with respect to orbiter images. Vertically stretching the image allows features to be more readily identified by the Mars Exploration Rover science team.

    The bright white dot near the horizon to the right of center (barely visible without labeling or zoom-in) is thought to be a light-toned outcrop on the far wall of the crater, suggesting that the rover can see over the low rim of Victoria. In figure 1, the northeast and southeast rims are labeled

  9. Organic-carbon-rich rocks: Fast or slow organic-carbon accumulation?

    SciTech Connect

    Isaacs, C.M.; Piper, D.Z.; Keller, M.A.

    1996-12-31

    Organic-carbon-rich rocks and sediments are generally attributed in the marine geologic literature to high rates of organic carbon accumulation, resulting either from rapid input and/or excellent preservation. An alternate interpretation suggested by evidence from both oil-source rocks and modern sediments is that many organic-carbon-rich strata result from comparatively slow accumulation of organic carbon that is little diluted. The idea that organic-carbon-rich rocks represent rapid organic-carbon accumulation derives partly from the enhanced organic-carbon preservation associated with faster burial. Re-evaluation of published sediment trap and accumulation rate data in modern oceans shows, however, that sedimentation rate has been highly over-rated as a cause of high organic carbon abundance. As sedimentation rate increases, increased dilution outpaces increased preservation such that, other things being equal, more abundant organic carbon is associated with slower (not faster) sedimentation rates. Compared to an equal thickness of rapidly accumulated organic-carbon-lean sediment in the geologic record, slowly accumulated organic-carbon-rich sediment can represent 10-20 times more time-but be misinterpreted as reflecting rapid organic carbon accumulation by the common practice of interpolating age linearly with strata thickness. This relation explains the {open_quotes}enigma{close_quotes} of transgressive black shales, including numerous oil source-rocks worldwide associated with early phases of sea level rise. In offshore locations (20-200 km from the coast), rising sea level may sharply reduce terrigenous supply without significantly affecting productivity. The result is an organic-carbon-rich condensed zone reflecting neither high productivity nor low bottom-water oxygen nor rapid sedimentation, but simply lack of dilution.

  10. Organic-carbon-rich rocks: Fast or slow organic-carbon accumulation

    SciTech Connect

    Isaacs, C.M.; Piper, D.Z.; Keller, M.A. )

    1996-01-01

    Organic-carbon-rich rocks and sediments are generally attributed in the marine geologic literature to high rates of organic carbon accumulation, resulting either from rapid input and/or excellent preservation. An alternate interpretation suggested by evidence from both oil-source rocks and modern sediments is that many organic-carbon-rich strata result from comparatively slow accumulation of organic carbon that is little diluted. The idea that organic-carbon-rich rocks represent rapid organic-carbon accumulation derives partly from the enhanced organic-carbon preservation associated with faster burial. Re-evaluation of published sediment trap and accumulation rate data in modern oceans shows, however, that sedimentation rate has been highly over-rated as a cause of high organic carbon abundance. As sedimentation rate increases, increased dilution outpaces increased preservation such that, other things being equal, more abundant organic carbon is associated with slower (not faster) sedimentation rates. Compared to an equal thickness of rapidly accumulated organic-carbon-lean sediment in the geologic record, slowly accumulated organic-carbon-rich sediment can represent 10-20 times more time-but be misinterpreted as reflecting rapid organic carbon accumulation by the common practice of interpolating age linearly with strata thickness. This relation explains the [open quotes]enigma[close quotes] of transgressive black shales, including numerous oil source-rocks worldwide associated with early phases of sea level rise. In offshore locations (20-200 km from the coast), rising sea level may sharply reduce terrigenous supply without significantly affecting productivity. The result is an organic-carbon-rich condensed zone reflecting neither high productivity nor low bottom-water oxygen nor rapid sedimentation, but simply lack of dilution.

  11. Natural radionuclide accumulation by raindrops

    NASA Astrophysics Data System (ADS)

    Gusev, Anatoly; Martin, Inacio; Shkevov, Rumen; Alves, Mauro

    2016-07-01

    The laboratory of environmental radiation of ITA (São José dos Campos, 23°11'11″S, 45°52'43″W, 650 MAMSL) performs simultaneous monitoring of a natural radiation background and meteorological parameters. A time resolution of up to 1 minute allows a detailed comparison of changes in meteorological parameters with those of a concentration of ambient radon progenies in the atmosphere. Results of a study of variation of a fallout of radon progenies ^{214}Pb and ^{214}Bi concomitanting rainfalls are present. The radionuclide fallout rate is reconstructed from the observed gamma rate through a simulation of the first kind Volterra integral equation with difference kernel, determined by ratio of precipitating rates of 214Pb and 214Bi and their decay half times. An original straightforward step-by-step procedure was used for the numerical solution of the equation. The radionuclide concentration in the rainwater is calculated as a ratio of the reconstructed fallout to the measured rainfall. It was observed that the radionuclide fallout rate increases as the rainfall one in approximately power 0.6, i.e. the same as the mean raindrop volume. The concentration thereafter decreases as the rainfall rate in power 0.4. A numerical simulation of the process of accumulation of the radionuclides during diffusion and coalescence drop growth and aerosol scavenging during a passage from a cloud to the ground was performed. The results of the simulations agree with the experimental data.

  12. The effects of aluminium on plant growth in a temperate and deciduous aluminium accumulating species

    PubMed Central

    Schmitt, Marco; Watanabe, Toshihiro; Jansen, Steven

    2016-01-01

    Aluminium (Al) is a phytotoxic element affecting the growth and yield of many crop plants, especially in the tropics. Yet, some plants are able to accumulate high levels of Al. The monogeneric family Symplocaceae represents an Al accumulating family including many tropical and evergreen species with high Al levels in their above ground plant tissues. It is unclear, however, whether Al accumulation also characterises temperate species of Symplocos, and whether or not the uptake has a beneficial growth effect. Here, we investigate if the temperate, deciduous species Symplocos paniculata is able to accumulate Al by growing seedlings and saplings in a hydroponic setup at pH 4 with and without Al. Pyrocatechol-violet (PCV) and aluminon staining was performed to visualize Al accumulation in various plant tissues. Both seedlings and saplings accumulate Al in their tissues if available. Mean Al levels in leaves were 4107 (±1474 mg kg−1) and 4290 (±4025 mg kg−1) for the seedlings and saplings, respectively. The saplings treated without Al showed a high mortality rate unlike the Al accumulating ones. The seedlings, however, showed no difference in growth and vitality between the two treatments. The saplings treated with Al showed new twig, leaf and root development, resulting in a considerable biomass increase. PCV and aluminon staining indicated the presence of Al in leaf, wood and bark tissue of the plants. S. paniculata shares the capacity to accumulate Al with its tropical sister species and is suggested to be a facultative accumulator. Whether or not Al has a beneficial effect remains unclear, due to developmental differences between seedlings and saplings. Al is suggested to be transported via the xylem transport system into the leaves, which show the highest Al levels. Radial transport via ray parenchyma to bark tissue is also likely given the high Al concentrations in the bark tissue. PMID:27613876

  13. [Carbon accumulation in soils of forest and bog ecosystems of southern Valdai in the Holocene].

    PubMed

    Minaeva, T Iu; Trofimov, S Ia; Chichagova, O A; Dorofeeva, E I; Sirin, A A; Glushkov, I V; Mikhaĭlov, I D; Kromer, B

    2008-01-01

    Carbon stocks and accumulation rates in humus and peat horizons of the contiguous soil series of forest and bog ecosystems have been studied in the Central Forest State Biosphere Reserve (CFSBR, Tver region). Upland soil types (soddy podzolic, brown, and white podzolic) have been compared to waterlogged (peaty gley podzolic and peaty gley) and bog soils differing in trophic status, including those of raised, transitional, and lowland bogs. The results show that carbon stocks in mineral soils are many times smaller than in waterlogged soils and an order of magnitude smaller than in bog soils. Mineral and bog soils are characterized by similar rates of carbon accumulation averaged over the entire period of their existence. The highest rate of carbon accumulation has been noted for the soils of waterlogged habitats, although this process may be periodically disturbed by fires and other stress influences.

  14. Control of helium accumulation

    SciTech Connect

    Varadarajan, V.; Miley, G.H.

    1990-01-01

    The fishbone like oscillations in ignited tokamaks are addressed in an exploratory manner. The effects of the strong m = 1 oscillations and the weak high-frequency oscillations are examined in order to explore the feasibility of utilizing these oscillations for alpha accumulation control. The prospects of achieving small scale continuous alpha removal from the plasma center by mild fishbone-like oscillations are examined.

  15. Holocene accumulation and ice flow near the West Antarctic Ice Sheet Divide ice core site

    NASA Astrophysics Data System (ADS)

    Koutnik, Michelle R.; Fudge, T. J.; Conway, Howard; Waddington, Edwin D.; Neumann, Thomas A.; Cuffey, Kurt M.; Buizert, Christo; Taylor, Kendrick C.

    2016-05-01

    The West Antarctic Ice Sheet Divide Core (WDC) provided a high-resolution climate record from near the Ross-Amundsen Divide in Central West Antarctica. In addition, radar-detected internal layers in the vicinity of the WDC site have been dated directly from the ice core to provide spatial variations in the age structure of the region. Using these two data sets together, we first infer a high-resolution Holocene accumulation-rate history from 9.2 kyr of the ice-core timescale and then confirm that this climate history is consistent with internal layers upstream of the core site. Even though the WDC was drilled only 24 km from the modern ice divide, advection of ice from upstream must be taken into account. We evaluate histories of accumulation rate by using a flowband model to generate internal layers that we compare to observed layers. Results show that the centennially averaged accumulation rate was over 20% lower than modern at 9.2 kyr before present (B.P.), increased by 40% from 9.2 to 2.3 kyr B.P., and decreased by at least 10% over the past 2 kyr B.P. to the modern values; these Holocene accumulation-rate changes in Central West Antarctica are larger than changes inferred from East Antarctic ice-core records. Despite significant changes in accumulation rate, throughout the Holocene the regional accumulation pattern has likely remained similar to today, and the ice-divide position has likely remained on average within 5 km of its modern position. Continent-scale ice-sheet models used for reconstructions of West Antarctic ice volume should incorporate this accumulation history.

  16. The accumulation and structure of comets

    NASA Technical Reports Server (NTRS)

    Donn, Bertram

    1991-01-01

    The paper reviews evidence for the accumulation of the terrestrial planets and comets from solid grains, with emphasis on the various proposals for the formation of cometary nuclei. With three exceptions, all hypotheses conclude or imply that a single compact object forms. Several hypotheses start with Goldreich-Ward-type gravitational instabilities. The collapse for this case also occurs at low velocities in the cm/s to m/s range. Experiment and theory show that under these conditions, low-density, filamentary clusters form that are fractal aggregates with a fractal dimension approximately equal to 2. In order to form cometary nuclei, the initial temperature must be about 50 K and not undergo a significant temperature rise during the accumulation process. The calculations show that accumulation will occur at low temperatures. Models of cometary nuclei are reviewed, and a simple model of the structure that results fom the accumulation of fluffy aggregates is described.

  17. Accumulation of nickel in transgenic tobacco

    NASA Astrophysics Data System (ADS)

    Sidik, Nik Marzuki; Othman, Noor Farhan

    2013-11-01

    The accumulation of heavy metal Ni in the roots and leaves of four T1 transgenic lines of tobacco (T(1)20E, T(1)24C, T(1)18B1 and T(1)20B) expressing eiMT1 from E.indica was assessed. The aim of the study was to investigate the level of Ni accumulation in the leaves and roots of each transgenic lines and to evaluate the eligibility of the plants to be classified as a phytoremediation agent. All of the transgenic lines showed different ability in accumulating different metals and has translocation factor (TF) less than 1 (TF<1) at all levels of metal treatment. Among the 4 transgenic lines, transgenic line T(1)24C showed the highest accumulation of Ni (251.9 ± 0.014 mg/kg) and the lowest TF value (TFT(1)24C=0.0875) at 60 ppm Ni.

  18. Tipping news in information accumulation system

    NASA Astrophysics Data System (ADS)

    Shin, J. K.

    2010-05-01

    As a continuous opinion dynamics model, the information accumulation system (IAS) includes three basic mechanisms of the news, the inheritance and the diffusion as contributing to the information accumulation process of a system. A system is composed of agents who diffuse information through internal interaction, while each of them has incomplete memory or inheritance rate. The news comes from external sources of information, such as mass media. Previously the model IAS was studied only for the small news problems. In this study, a tipping news problem is considered. A key question of the problem is: what is the minimum strength of advertisement that can tip the minority opinion to a majority one? Dynamics of the IAS is briefly revisited with a special interest on nonlinear behavior of the model. In particular, it is shown that a discrete map of the IAS for a single color problem can be transformed into a logistic map, from which the dynamics of the IAS can be better understood. To show the applicability of the IAS model, the result is applied to explain the concept of the critical population size, which claims that there is a minimum population size for a social knowledge system to be continuously inherited without being lost. And critical size of the tipping news is found analytically in terms of IAS parameters. Some of the key results from the present study are compared in detail with the results from the Brownian particle model, which is believed to be the most similar model to the IAS. The concept of tipping news is used to show that a traditional society can tip at an exceptionally low inter-community exposure. Finally, the result was applied to the language competition problem.

  19. DISTRIBUTED AND ACCUMULATED REINFORCEMENT ARRANGEMENTS: EVALUATIONS OF EFFICACY AND PREFERENCE

    PubMed Central

    DELEON, ISER G.; CHASE, JULIE A.; FRANK-CRAWFORD, MICHELLE A.; CARREAU-WEBSTER, ABBEY B.; TRIGGS, MANDY M.; BULLOCK, CHRISTOPHER E.; JENNETT, HEATHER K.

    2015-01-01

    We assessed the efficacy of, and preference for, accumulated access to reinforcers, which allows uninterrupted engagement with the reinforcers but imposes an inherent delay required to first complete the task. Experiment 1 compared rates of task completion in 4 individuals who had been diagnosed with intellectual disabilities when reinforcement was distributed (i.e., 30-s access to the reinforcer delivered immediately after each response) and accumulated (i.e., 5-min access to the reinforcer after completion of multiple consecutive responses). Accumulated reinforcement produced response rates that equaled or exceeded rates during distributed reinforcement for 3 participants. Experiment 2 used a concurrent-chains schedule to examine preferences for each arrangement. All participants preferred delayed, accumulated access when the reinforcer was an activity. Three participants also preferred accumulated access to edible reinforcers. The collective results suggest that, despite the inherent delay, accumulated reinforcement is just as effective and is often preferred by learners over distributed reinforcement. PMID:24782203

  20. Distributed and accumulated reinforcement arrangements: evaluations of efficacy and preference.

    PubMed

    DeLeon, Iser G; Chase, Julie A; Frank-Crawford, Michelle A; Carreau-Webster, Abbey B; Triggs, Mandy M; Bullock, Christopher E; Jennett, Heather K

    2014-01-01

    We assessed the efficacy of, and preference for, accumulated access to reinforcers, which allows uninterrupted engagement with the reinforcers but imposes an inherent delay required to first complete the task. Experiment 1 compared rates of task completion in 4 individuals who had been diagnosed with intellectual disabilities when reinforcement was distributed (i.e., 30-s access to the reinforcer delivered immediately after each response) and accumulated (i.e., 5-min access to the reinforcer after completion of multiple consecutive responses). Accumulated reinforcement produced response rates that equaled or exceeded rates during distributed reinforcement for 3 participants. Experiment 2 used a concurrent-chains schedule to examine preferences for each arrangement. All participants preferred delayed, accumulated access when the reinforcer was an activity. Three participants also preferred accumulated access to edible reinforcers. The collective results suggest that, despite the inherent delay, accumulated reinforcement is just as effective and is often preferred by learners over distributed reinforcement.

  1. 19 CFR 10.917 - Accumulation.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 19 Customs Duties 1 2012-04-01 2012-04-01 false Accumulation. 10.917 Section 10.917 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Peru Trade Promotion...

  2. 19 CFR 10.917 - Accumulation.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 19 Customs Duties 1 2013-04-01 2013-04-01 false Accumulation. 10.917 Section 10.917 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Peru Trade Promotion...

  3. 19 CFR 10.917 - Accumulation.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 19 Customs Duties 1 2014-04-01 2014-04-01 false Accumulation. 10.917 Section 10.917 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Peru Trade Promotion...

  4. 19 CFR 10.1017 - Accumulation.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 19 Customs Duties 1 2012-04-01 2012-04-01 false Accumulation. 10.1017 Section 10.1017 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Korea Free Trade Agreement...

  5. 19 CFR 10.1017 - Accumulation.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 19 Customs Duties 1 2014-04-01 2014-04-01 false Accumulation. 10.1017 Section 10.1017 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Korea Free Trade Agreement...

  6. 19 CFR 10.1017 - Accumulation.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 19 Customs Duties 1 2013-04-01 2013-04-01 false Accumulation. 10.1017 Section 10.1017 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Korea Free Trade Agreement...

  7. 19 CFR 10.597 - Accumulation.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 19 Customs Duties 1 2010-04-01 2010-04-01 false Accumulation. 10.597 Section 10.597 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. Dominican Republic-Central...

  8. 19 CFR 10.772 - Accumulation.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 19 Customs Duties 1 2010-04-01 2010-04-01 false Accumulation. 10.772 Section 10.772 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Morocco Free Trade...

  9. 19 CFR 10.772 - Accumulation.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 19 Customs Duties 1 2011-04-01 2011-04-01 false Accumulation. 10.772 Section 10.772 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Morocco Free Trade...

  10. 19 CFR 10.772 - Accumulation.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 19 Customs Duties 1 2014-04-01 2014-04-01 false Accumulation. 10.772 Section 10.772 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Morocco Free Trade...

  11. 19 CFR 10.772 - Accumulation.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 19 Customs Duties 1 2012-04-01 2012-04-01 false Accumulation. 10.772 Section 10.772 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Morocco Free Trade...

  12. 19 CFR 10.772 - Accumulation.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 19 Customs Duties 1 2013-04-01 2013-04-01 false Accumulation. 10.772 Section 10.772 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT OF THE TREASURY ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Morocco Free Trade...

  13. 19 CFR 10.458 - Accumulation.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... ARTICLES CONDITIONALLY FREE, SUBJECT TO A REDUCED RATE, ETC. United States-Chile Free Trade Agreement Rules of Origin § 10.458 Accumulation. (a) Originating goods or materials of Chile or the United States... of Chile, the United States, or both, by one or more producers, will be considered as an...

  14. No saturation in the accumulation of alien species worldwide.

    PubMed

    Seebens, Hanno; Blackburn, Tim M; Dyer, Ellie E; Genovesi, Piero; Hulme, Philip E; Jeschke, Jonathan M; Pagad, Shyama; Pyšek, Petr; Winter, Marten; Arianoutsou, Margarita; Bacher, Sven; Blasius, Bernd; Brundu, Giuseppe; Capinha, César; Celesti-Grapow, Laura; Dawson, Wayne; Dullinger, Stefan; Fuentes, Nicol; Jäger, Heinke; Kartesz, John; Kenis, Marc; Kreft, Holger; Kühn, Ingolf; Lenzner, Bernd; Liebhold, Andrew; Mosena, Alexander; Moser, Dietmar; Nishino, Misako; Pearman, David; Pergl, Jan; Rabitsch, Wolfgang; Rojas-Sandoval, Julissa; Roques, Alain; Rorke, Stephanie; Rossinelli, Silvia; Roy, Helen E; Scalera, Riccardo; Schindler, Stefan; Štajerová, Kateřina; Tokarska-Guzik, Barbara; van Kleunen, Mark; Walker, Kevin; Weigelt, Patrick; Yamanaka, Takehiko; Essl, Franz

    2017-02-15

    Although research on human-mediated exchanges of species has substantially intensified during the last centuries, we know surprisingly little about temporal dynamics of alien species accumulations across regions and taxa. Using a novel database of 45,813 first records of 16,926 established alien species, we show that the annual rate of first records worldwide has increased during the last 200 years, with 37% of all first records reported most recently (1970-2014). Inter-continental and inter-taxonomic variation can be largely attributed to the diaspora of European settlers in the nineteenth century and to the acceleration in trade in the twentieth century. For all taxonomic groups, the increase in numbers of alien species does not show any sign of saturation and most taxa even show increases in the rate of first records over time. This highlights that past efforts to mitigate invasions have not been effective enough to keep up with increasing globalization.

  15. No saturation in the accumulation of alien species worldwide

    PubMed Central

    Seebens, Hanno; Blackburn, Tim M.; Dyer, Ellie E.; Genovesi, Piero; Hulme, Philip E.; Jeschke, Jonathan M.; Pagad, Shyama; Pyšek, Petr; Winter, Marten; Arianoutsou, Margarita; Bacher, Sven; Blasius, Bernd; Brundu, Giuseppe; Capinha, César; Celesti-Grapow, Laura; Dawson, Wayne; Dullinger, Stefan; Fuentes, Nicol; Jäger, Heinke; Kartesz, John; Kenis, Marc; Kreft, Holger; Kühn, Ingolf; Lenzner, Bernd; Liebhold, Andrew; Mosena, Alexander; Moser, Dietmar; Nishino, Misako; Pearman, David; Pergl, Jan; Rabitsch, Wolfgang; Rojas-Sandoval, Julissa; Roques, Alain; Rorke, Stephanie; Rossinelli, Silvia; Roy, Helen E.; Scalera, Riccardo; Schindler, Stefan; Štajerová, Kateřina; Tokarska-Guzik, Barbara; van Kleunen, Mark; Walker, Kevin; Weigelt, Patrick; Yamanaka, Takehiko; Essl, Franz

    2017-01-01

    Although research on human-mediated exchanges of species has substantially intensified during the last centuries, we know surprisingly little about temporal dynamics of alien species accumulations across regions and taxa. Using a novel database of 45,813 first records of 16,926 established alien species, we show that the annual rate of first records worldwide has increased during the last 200 years, with 37% of all first records reported most recently (1970–2014). Inter-continental and inter-taxonomic variation can be largely attributed to the diaspora of European settlers in the nineteenth century and to the acceleration in trade in the twentieth century. For all taxonomic groups, the increase in numbers of alien species does not show any sign of saturation and most taxa even show increases in the rate of first records over time. This highlights that past efforts to mitigate invasions have not been effective enough to keep up with increasing globalization. PMID:28198420

  16. Identification of genes associated with chlorophyll accumulation in flower petals.

    PubMed

    Ohmiya, Akemi; Hirashima, Masumi; Yagi, Masafumi; Tanase, Koji; Yamamizo, Chihiro

    2014-01-01

    Plants have an ability to prevent chlorophyll accumulation, which would mask the bright flower color, in their petals. In contrast, leaves contain substantial amounts of chlorophyll, as it is essential for photosynthesis. The mechanisms of organ-specific chlorophyll accumulation are unknown. To identify factors that determine the chlorophyll content in petals, we compared the expression of genes related to chlorophyll metabolism in different stages of non-green (red and white) petals (very low chlorophyll content), pale-green petals (low chlorophyll content), and leaves (high chlorophyll content) of carnation (Dianthus caryophyllus L.). The expression of many genes encoding chlorophyll biosynthesis enzymes, in particular Mg-chelatase, was lower in non-green petals than in leaves. Non-green petals also showed higher expression of genes involved in chlorophyll degradation, including STAY-GREEN gene and pheophytinase. These data suggest that the absence of chlorophylls in carnation petals may be caused by the low rate of chlorophyll biosynthesis and high rate of degradation. Similar results were obtained by the analysis of Arabidopsis microarray data. In carnation, most genes related to chlorophyll biosynthesis were expressed at similar levels in pale-green petals and leaves, whereas the expression of chlorophyll catabolic genes was higher in pale-green petals than in leaves. Therefore, we hypothesize that the difference in chlorophyll content between non-green and pale-green petals is due to different levels of chlorophyll biosynthesis. Our study provides a basis for future molecular and genetic studies on organ-specific chlorophyll accumulation.

  17. Kinetic analysis of N-acylphosphatidylserine accumulation and implications for membrane assembly in Rhodopseudomonas sphaeroides.

    PubMed Central

    Cain, B D; Donohue, T J; Kaplan, S

    1982-01-01

    The accumulation of N-acylphosphatidylserine (NAPS) in response to the inclusion of Tris in the growth medium of Rhodopseudomonas sphaeroides strain M29-5 has been examined. In the accompanying paper (Donohue et al., J. Bacteriol. 152:000--000, 1982), we show that in response to Tris, NAPS accumulated to as much as 40% of the total cellular phospholipid content. NAPS accumulation began immediately upon addition of Tris and was reflected as an abrupt 12-fold increase in the apparent rate of NAPS accumulation. We suggest that Tris altered the flow of metabolites through a preexisting and previously unknown metabolic pathway. NAPS accumulation ceased immediately upon the removal of Tris; however, accumulated NAPS remained largely metabolically stable. Importantly, under conditions in which NAPS was not accumulated, the intracytoplasmic membrane was shown to be virtually devoid of newly synthesized NAPS. The significance of this observation is discussed in terms of its physiological implications on phospholipid transfer and membrane biogenesis in R. sphaeroides. PMID:6982265

  18. Heat exchanger-accumulator

    DOEpatents

    Ecker, Amir L.

    1980-01-01

    What is disclosed is a heat exchanger-accumulator for vaporizing a refrigerant or the like, characterized by an upright pressure vessel having a top, bottom and side walls; an inlet conduit eccentrically and sealingly penetrating through the top; a tubular overflow chamber disposed within the vessel and sealingly connected with the bottom so as to define an annular outer volumetric chamber for receiving refrigerant; a heat transfer coil disposed in the outer volumetric chamber for vaporizing the liquid refrigerant that accumulates there; the heat transfer coil defining a passageway for circulating an externally supplied heat exchange fluid; transferring heat efficiently from the fluid; and freely allowing vaporized refrigerant to escape upwardly from the liquid refrigerant; and a refrigerant discharge conduit penetrating sealingly through the top and traversing substantially the length of the pressurized vessel downwardly and upwardly such that its inlet is near the top of the pressurized vessel so as to provide a means for transporting refrigerant vapor from the vessel. The refrigerant discharge conduit has metering orifices, or passageways, penetrating laterally through its walls near the bottom, communicating respectively interiorly and exteriorly of the overflow chamber for controllably carrying small amounts of liquid refrigerant and oil to the effluent stream of refrigerant gas.

  19. 150,000 years of loess accumulation in central Alaska

    NASA Astrophysics Data System (ADS)

    Jensen, Britta J. L.; Evans, Michael E.; Froese, Duane G.; Kravchinsky, Vadim A.

    2016-03-01

    The Halfway House site in interior Alaska is arguably the most studied loess deposit in northwestern North America. The site contains a complex paleomagnetic and paleoenvironmental record, but has lacked the robust chronologic control that would allow its full potential to be exploited. Detailed reexamination of stratigraphy, paleomagnetics and tephrostratigraphy reveals a relatively complete marine isotope stage (MIS) 6 to Holocene record constrained by the Old Crow (124 ± 10 ka), VT (106 ± 10 ka), Sheep Creek-Klondike (ca. 80 ka), Dominion Creek (77 ± 8 ka) and Dawson (ca. 30.2 cal ka BP) tephras. We show two well-developed paleosols formed during Marine Isotope Stages (MIS) 5e and 5a, while MIS 5c and 5b are either poorly represented or absent. The new tephrostratigraphy presented here is the most complete one to date for the late Pleistocene and indicates MIS 5 sediments are more common than previously recognized. A magnetic excursion within the sediments is identified as the post-Blake excursion (94.1 ± 7.8 ka), providing independent age control and adding to the increasing body of evidence that Alaskan loess is a detailed recorder of variations of the Earth's magnetic field over time. A high-resolution magnetic susceptibility profile placed into this new chronostratigraphic framework supports the hypothesis that wind-intensity is the main variable controlling fluctuations in susceptibility. Correlation of the susceptibility record to global marine δ18O records is complicated by highly variable accumulation rates. We find the lowest rates of accumulation during peak warm and cold stages, while abrupt increases are associated with periods of transition between marine isotope (sub)stages. Building on previous accumulation models for Alaska, surface roughness is likely a leading variable controlling loess accumulation rates during transitions and peak cold periods, but the negligible accumulation during MIS 5e and 5a suggests that loess production was

  20. Changes in the physiological properties and kinetics of citric acid accumulation via carbon ion irradiation mutagenesis of Aspergillus niger *

    PubMed Central

    Hu, Wei; Chen, Ji-hong; Wang, Shu-yang; Liu, Jing; Song, Yuan; Wu, Qing-feng; Li, Wen-jian

    2016-01-01

    The objective of this work was to produce citric acid from corn starch using a newly isolated mutant of Aspergillus niger, and to analyze the relationship between changes in the physiological properties of A. niger induced by carbon ion irradiation and citric acid accumulation. Our results showed that the physiological characteristics of conidia in A. niger were closely related to citric acid accumulation and that lower growth rate and viability of conidia may be beneficial to citric acid accumulation. Using corn starch as a raw material, a high-yielding citric acid mutant, named HW2, was obtained. In a 10-L bioreactor, HW2 can accumulate 118.9 g/L citric acid with a residual total sugar concentration of only 14.4 g/L. This represented an 18% increase in citric acid accumulation and a 12.5% decrease in sugar utilization compared with the original strain.

  1. Multidecadal time series of satellite-detected accumulations of cyanobacteria in the Baltic Sea

    NASA Astrophysics Data System (ADS)

    Kahru, M.; Elmgren, R.

    2014-07-01

    Cyanobacteria, primarily of the species Nodularia spumigena, form extensive surface accumulations in the Baltic Sea in July and August, ranging from diffuse flakes to dense surface scums. The area of these accumulations can reach ~ 200 000 km2. We describe the compilation of a 35-year-long time series (1979-2013) of cyanobacteria surface accumulations in the Baltic Sea using multiple satellite sensors. This appears to be one of the longest satellite-based time series in biological oceanography. The satellite algorithm is based on remote sensing reflectance of the water in the red band, a measure of turbidity. Validation of the satellite algorithm using horizontal transects from a ship of opportunity showed the strongest relationship with phycocyanin fluorescence (an indicator of cyanobacteria), followed by turbidity and then by chlorophyll a fluorescence. The areal fraction with cyanobacteria accumulations (FCA) and the total accumulated area affected (TA) were used to characterize the intensity and extent of the accumulations. The fraction with cyanobacteria accumulations was calculated as the ratio of the number of detected accumulations to the number of cloud-free sea-surface views per pixel during the season (July-August). The total accumulated area affected was calculated by adding the area of pixels where accumulations were detected at least once during the season. The fraction with cyanobacteria accumulations and TA were correlated (R2 = 0.55) and both showed large interannual and decadal-scale variations. The average FCA was significantly higher for the second half of the time series (13.8%, 1997-2013) than for the first half (8.6%, 1979-1996). However, that does not seem to represent a long-term trend but decadal-scale oscillations. Cyanobacteria accumulations were common in the 1970s and early 1980s (FCA between 11-17%), but rare (FCA below 4%) during 1985-1990; they increased again starting in 1991 and particularly in 1999, reaching maxima in FCA (~ 25

  2. Solids Accumulation Scouting Studies

    SciTech Connect

    Duignan, M. R.; Steeper, T. J.; Steimke, J. L.

    2012-09-26

    The objective of Solids Accumulation activities was to perform scaled testing to understand the behavior of remaining solids in a Double Shell Tank (DST), specifically AW-105, at Hanford during multiple fill, mix, and transfer operations. It is important to know if fissionable materials can concentrate when waste is transferred from staging tanks prior to feeding waste treatment plants. Specifically, there is a concern that large, dense particles containing plutonium could accumulate in poorly mixed regions of a blend tank heel for tanks that employ mixing jet pumps. At the request of the DOE Hanford Tank Operations Contractor, Washington River Protection Solutions, the Engineering Development Laboratory of the Savannah River National Laboratory performed a scouting study in a 1/22-scale model of a waste staging tank to investigate this concern and to develop measurement techniques that could be applied in a more extensive study at a larger scale. Simulated waste tank solids: Gibbsite, Zirconia, Sand, and Stainless Steel, with stainless steel particles representing the heavier particles, e.g., plutonium, and supernatant were charged to the test tank and rotating liquid jets were used to mix most of the solids while the simulant was pumped out. Subsequently, the volume and shape of the mounds of residual solids and the spatial concentration profiles for the surrogate for heavier particles were measured. Several techniques were developed and equipment designed to accomplish the measurements needed and they included: 1. Magnetic particle separator to remove simulant stainless steel solids. A device was designed and built to capture these solids, which represent the heavier solids during a waste transfer from a staging tank. 2. Photographic equipment to determine the volume of the solids mounds. The mounds were photographed as they were exposed at different tank waste levels to develop a composite of topographical areas. 3. Laser rangefinders to determine the volume of

  3. Cell division modulates prion accumulation in cultured cells.

    PubMed

    Ghaemmaghami, Sina; Phuan, Puay-Wah; Perkins, Beth; Ullman, Julie; May, Barnaby C H; Cohen, Fred E; Prusiner, Stanley B

    2007-11-13

    The phenotypic effect of prions on host cells is influenced by the physical properties of the prion strain and its level of accumulation. In mammalian cell cultures, prion accumulation is determined by the interplay between de novo prion formation, catabolism, cell division, and horizontal cell-to-cell transmission. Understanding this dynamic enables the analytical modeling of protein-based heritability and infectivity. Here, we quantitatively measured these competing effects in a subline of neuroblastoma (N2a) cells and propose a concordant reaction mechanism to explain the kinetics of prion propagation. Our results show that cell division leads to a predictable reduction in steady-state prion levels but not to complete clearance. Scrapie-infected N2a cells were capable of accumulating different steady-state levels of prions, dictated partly by the rate of cell division. We also show that prions in this subline of N2a cells are transmitted primarily from mother to daughter cells, rather than horizontal cell-to-cell transmission. We quantitatively modeled our kinetic results based on a mechanism that assumes a subpopulation of prions is capable of self-catalysis, and the levels of this subpopulation reach saturation in fully infected cells. Our results suggest that the apparent effectiveness of antiprion compounds in culture may be strongly influenced by the growth phase of the target cells.

  4. Growth and metal accumulation in vetiver and two Sesbania species on lead/zinc mine tailings.

    PubMed

    Yang, B; Shu, W S; Ye, Z H; Lan, C Y; Wong, M H

    2003-09-01

    The lead (Pb)/zinc (Zn) tailings contained high concentrations of heavy metals (total Pb, Zn, Cu and Cd concentrations 4164, 4377, 35 and 32 mg kg(-1), respectively), and low contents of major nutrient elements (N, P, and K) and organic matter. A field trial was conducted to compare growth performance, metal accumulation of Vetiver (Vetiveria zizanioides) and two legume species (Sesbania rostrata and Sesbania sesban) grown on the tailings amended with domestic refuse and/or fertilizer. It was revealed that domestic refuse alone and the combination of domestic refuse and artificial fertilizer significantly improved the survival rates and growth of V. zizanioides and two Sesbania species, especially the combination. However, artificial fertilizer alone did not improve both the survival rate and growth performance of the plants grown on tailings. Roots of these species accumulated similar levels of heavy metals, but the shoots of two Sesbania species accumulated higher (3-4 folds) concentrations of Pb, Zn, Cu and Cd than shoots of V. zizanioides. Most of the heavy metals in V. zizanioides were accumulated in roots, and the translocation of metals from roots to shoots was restricted. Intercropping of V. zizanioides and S. rostrata did not show any beneficial effect on individual plant species, in terms of height, biomass, survival rate, and metal accumulation, possibly due to the rather short experimental period of 5 months.

  5. Seasonal arsenic accumulation in stream sediments at a groundwater discharge zone.

    PubMed

    MacKay, Allison A; Gan, Ping; Yu, Ran; Smets, Barth F

    2014-01-21

    Seasonal changes in arsenic and iron accumulation rates were examined in the sediments of a brook that receives groundwater discharges of arsenic and reduced iron. Clean glass bead columns were deployed in sediments for known periods over the annual hydrologic cycle to monitor changes in arsenic and iron concentrations in bead coatings. The highest accumulation rates occurred during the dry summer period (July-October) when groundwater discharges were likely greatest at the sample locations. The intermediate flow period (October-March), with higher surface water levels, was associated with losses of arsenic and iron from bead column coatings at depths below 2-6 cm. Batch incubations indicated iron releases from solids to be induced by biological reduction of iron (oxy)hydroxide solids. Congruent arsenic releases during incubation were limited by the high arsenic sorption capacity (0.536 mg(As)/mg(Fe)) of unreacted iron oxide solids. The flooded spring (March-June) with high surface water flows showed the lowest arsenic and iron accumulation rates in the sediments. Comparisons of accumulation rates across a shoreline transect were consistent with greater rates at regions exposed above surface water levels for longer times and greater losses at locations submerged below surface water. Iron (oxy)hydroxide solids in the shallowest sediments likely serve as a passive barrier to sorb arsenic released to pore water at depth by biological iron reduction.

  6. Landscape Evolution and Carbon Accumulation: Uniformitarianism Revisited

    NASA Astrophysics Data System (ADS)

    Rosenbloom, N. A.; Harden, J. W.; Neff, J. C.; Schimel, D. S.

    2003-12-01

    What is the role of hillslope transport in long-term carbon accumulation in soils? How do parent material, climate, and landform interact to produce the landscapes we observe today and to what extent can we use present day conditions to infer the dominant processes of the past? We use the CREEP [Rosenbloom, N.A. et al., 2001] process-response model to ask these questions, exploring the time-evolution of landscape form, soil distribution, and carbon accumulation in an undisturbed prairie site in western Iowa [Harden, J.W. et al., 2002]. The CREEP model simulates differential transport of soil particles, blanket deposition of atmospheric 10Be with eolian dust, and passive advection of soil carbon and 10Be, enabling the preferential enrichment and burial of rapidly moving soil constituents. By comparing landscape-wide average accumulations of 10Be to borehole observations at three hillslope positions, we conclude that the distribution of clay-adsorbed 10Be cannot be explained by co-transport with clay particles alone. Rather, 10Be appears to behave as a more complex tracer than originally assumed, requiring an explicit, independent parameterization of wet deposition and transport. By comparison, model carbon accumulation strongly reflects patterns of clay redistribution indicating that in situ carbon turnover is faster than redistribution. Observed vertical distributions of soil properties, including 10Be, could only be explained by assuming variations in deposition and erosion rates, specifically periods of accumulation, followed by periods of transport. This effect might not be apparent if only landform shape, geometry, and soil depth were considered and vertical distributions of soil properties were not explicitly simulated. The current landscape reflects a history of strong shifts in erosion and accumulation rates that cannot be simulated using a uniform parameterization of long-term landscape-evolution processes.

  7. Recent increases in sediment and nutrient accumulation in Bear Lake, Utah/Idaho, USA

    USGS Publications Warehouse

    Smoak, J.M.; Swarzenski, P.W.

    2004-01-01

    This study examines historical changes in sediment and nutrient accumulation rates in Bear Lake along the northeastern Utah/Idaho border, USA. Two sediment cores were dated by measuring excess 210Pb activities and applying the constant rate of supply (CRS) dating model. Historical rates of bulk sediment accumulation were calculated based on the ages within the sediment cores. Bulk sediment accumulation rates increased throughout the last 100 years. According to the CRS model, bulk sediment accumulation rates were <25mg cm-2 year-1 prior to 1935. Between 1935 and 1980, bulk sediment accumulation rates increased to approximately 40mg cm -2 year-1. This increase in sediment accumulation probably resulted from the re-connection of Bear River to Bear Lake. Bulk sediment accumulation rates accelerated again after 1980. Accumulation rates of total phosphorus (TP), total nitrogen (TN), total inorganic carbon (TIC), and total organic carbon (TOC) were calculated by multiplying bulk sediment accumulation rates times the concentrations of these nutrients in the sediment. Accumulation rates of TP, TN, TIC, and TOC increased as a consequence of increased bulk sediment accumulation rates after the re-connection of Bear River with Bear Lake.

  8. GREEN FLUORESCENT PIGMENT ACCUMULATED BY A MUTANT OF CELLVIBRIO GILVUS.

    PubMed

    LOVE, S H; HULCHER, F H

    1964-01-01

    Love, Samuel H. (Bowman Gray School of Medicine, Winston-Salem, N.C.), and Frank H. Hulcher. Green fluorescent pigment accumulated by a mutant of Cellvibrio gilvus. J. Bacteriol. 87:39-45. 1964.-A mutant of Cellvibrio gilvus, designated strain 139A, liberated a green, fluorescent pigment into the surrounding culture medium. A study of the factors which affected the accumulation of this pigment led to the development of a chemically defined medium which supported maximal pigment accumulation in aerated, liquid cultures. d-Glucose, glycine or l-serine, l-phenylalanine, l-proline, and l-lysine comprised the organic components of this medium. The visible absorption spectrum of the pigment showed a maximal band at 400 mmu (pH 7.0). A difference spectrum between reduced and oxidized pigment showed loss of the band at 400 mmu upon oxidation. However, a methanol-extractable, flavinelike compound occurred in the wild strain but not in the mutant. Ferric ions added to the defined medium stimulated growth, with a concomitant reduction of pigment accumulation. Pigment was formed at a maximal rate during the stationary growth phase, and the highest yield was obtained by 18 hr. Organic solvents did not extract the pigment from water solutions. One and sometimes two, compounds absorbing at 400 mmu could be eluted by ion-exchange chromatography on Cellex-P (H(+)), which was used to separate the pigment from other components in the culture supernatants so that the radioactivity of the pigment could be measured. The mutant synthesized C(14)-labeled pigment from d-glucose-U-C(14) and from each of four amino acids (glycine-1-C(14), l-phenylalanine-U-C(14), l-proline-U-C(14), and l-lysine-U-C(14). Delta-Amino-levulenic acid-4-C(14) did not contribute C(14) to the pigment.

  9. An exactly solvable, spatial model of mutation accumulation in cancer

    PubMed Central

    Paterson, Chay; Nowak, Martin A.; Waclaw, Bartlomiej

    2016-01-01

    One of the hallmarks of cancer is the accumulation of driver mutations which increase the net reproductive rate of cancer cells and allow them to spread. This process has been studied in mathematical models of well mixed populations, and in computer simulations of three-dimensional spatial models. But the computational complexity of these more realistic, spatial models makes it difficult to simulate realistically large and clinically detectable solid tumours. Here we describe an exactly solvable mathematical model of a tumour featuring replication, mutation and local migration of cancer cells. The model predicts a quasi-exponential growth of large tumours, even if different fragments of the tumour grow sub-exponentially due to nutrient and space limitations. The model reproduces clinically observed tumour growth times using biologically plausible rates for cell birth, death, and migration rates. We also show that the expected number of accumulated driver mutations increases exponentially in time if the average fitness gain per driver is constant, and that it reaches a plateau if the gains decrease over time. We discuss the realism of the underlying assumptions and possible extensions of the model. PMID:28004754

  10. An exactly solvable, spatial model of mutation accumulation in cancer

    NASA Astrophysics Data System (ADS)

    Paterson, Chay; Nowak, Martin A.; Waclaw, Bartlomiej

    2016-12-01

    One of the hallmarks of cancer is the accumulation of driver mutations which increase the net reproductive rate of cancer cells and allow them to spread. This process has been studied in mathematical models of well mixed populations, and in computer simulations of three-dimensional spatial models. But the computational complexity of these more realistic, spatial models makes it difficult to simulate realistically large and clinically detectable solid tumours. Here we describe an exactly solvable mathematical model of a tumour featuring replication, mutation and local migration of cancer cells. The model predicts a quasi-exponential growth of large tumours, even if different fragments of the tumour grow sub-exponentially due to nutrient and space limitations. The model reproduces clinically observed tumour growth times using biologically plausible rates for cell birth, death, and migration rates. We also show that the expected number of accumulated driver mutations increases exponentially in time if the average fitness gain per driver is constant, and that it reaches a plateau if the gains decrease over time. We discuss the realism of the underlying assumptions and possible extensions of the model.

  11. Accumulation and turnover of carbon in organic and mineral soils of the BOREAS northern study area

    USGS Publications Warehouse

    Trumbore, S.E.; Harden, J.W.

    1997-01-01

    Rates of input, accumulation, and turnover of C differ markedly within soil profiles and in soils with different drainage in the BOREAS northern study area. Soil C storage increases from ???3 kg C m-2 in well-drained, sandy soils to greater than 100 kg C m-2 in wetlands. Two modes of C accumulation were observed in upland soil profiles. Large annual C inputs (0.06-0.1 kg C m-2 yr-1) and slow decomposition (turnover times of 6-250 years) lead to rapid C accumulation in regrowing surface moss and detrital layers following fire. Deep organic layers that have accumulated over the millennia since the initiation of soil development, and are located below the most recent charred horizon, show slower rates of input (0.015-0.03 kg C m-2 yr-1) and turnover (100-1600 years) and accumulate C about 10 times slower than surface detrital layers. Rates of C input to soils derived from C and 14C data were in accord with net primary production estimates, with highest rates of input (0.14-0.6 kg C m-2 yr-1) in wetlands. Turnover times for C in surface detrital layers were 6-15 years for well-drained sand soils that showed highest soil temperatures in summer, 30-40 years for wetlands, and 36-250 years for uplands with thick moss cover and black spruce trees. Long (>100 years) turnover times in upland black spruce/clay soils most likely reflect the influence of woody debris incorporated into detrital layers. Turnover times for deep organic and mineral layer C were controlled by drainage, with fastest turnover (80-130 years) in well-drained sand soils and slowest turnover (>3000 years) in wetlands. Total C accumulation rates, which account for C losses from both deep organic and surface detrital layers, are close to zero for sand/jack pine soils, 0.003-0.01 kg C m-2 yr-1 for moderately to poorly drained sites in mature forest stands, and 0.03 kg C m-2 yr-1 for a productive fen. Decomposition of organic matter more than several decades old accounts for 9-22% of total heterotrophic

  12. Accumulation and turnover of carbon in organic and mineral soils of the BOREAS northern study area

    NASA Astrophysics Data System (ADS)

    Trumbore, S. E.; Harden, J. W.

    1997-12-01

    Rates of input, accumulation, and turnover of C differ markedly within soil profiles and in soils with different drainage in the BOREAS northern study area. Soil C storage increases from ˜3 kg C m-2 in well-drained, sandy soils to greater than 100 kg C m-2 in wetlands. Two modes of C accumulation were observed in upland soil profiles. Large annual C inputs (0.06-0.1 kg C m-2 yr-1) and slow decomposition (turnover times of 6-250 years) lead to rapid C accumulation in regrowing surface moss and detrital layers following fire. Deep organic layers that have accumulated over the millennia since the initiation of soil development, and are located below the most recent charred horizon, show slower rates of input (0.015-0.03 kg C m-2 yr-1) and turnover (100-1600 years) and accumulate C about 10 times slower than surface detrital layers. Rates of C input to soils derived from C and 14C data were in accord with net primary production estimates, with highest rates of input (0.14-0.6 kg C m-2 yr-1) in wetlands. Turnover times for C in surface detrital layers were 6-15 years for well-drained sand soils that showed highest soil temperatures in summer, 30-40 years for wetlands, and 36-250 years for uplands with thick moss cover and black spruce trees. Long (>100 years) turnover times in upland black spruce/clay soils most likely reflect the influence of woody debris incorporated into detrital layers. Turnover times for deep organic and mineral layer C were controlled by drainage, with fastest turnover (80-130 years) in well-drained sand soils and slowest turnover (>3000 years) in wetlands. Total C accumulation rates, which account for C losses from both deep organic and surface detrital layers, are close to zero for sand/jack pine soils, 0.003-0.01 kg C m-2 yr-1 for moderately to poorly drained sites in mature forest stands, and 0.03 kg C m-2 yr-1 for a productive fen. Decomposition of organic matter more than several decades old accounts for 9-22% of total heterotrophic

  13. Geometric design of microfluidic chambers: platelet adhesion versus accumulation.

    PubMed

    Casa, Lauren D C; Ku, David N

    2014-02-01

    Arterial, platelet-rich thrombosis depends on shear rates and integrin binding to either a collagen surface or to the growing thrombus, which are mechanistically different. In general, small microfluidic test sections may favor platelet-surface adhesion without testing for the primary mode of intra-arterial thrombosis, i.e. platelet-platelet bonding and accumulation. In the present report, the ratio of platelet-platelet to platelet-surface interactions, R, and the percentage of platelet-platelet interactions, P, are estimated using an analytical approach for circular and rectangular test sections. Results show that the test section geometry strongly affects both R and P, with test section height in low-aspect ratio channels or diameter greater than 90 μm dominated by platelet-platelet interactions (R >10). Increasing rectangular test section aspect ratio decreases the required height. R increases linearly while P approaches 100 % asymptotically with increasing channel dimension. Analysis of platelet shape shows that the assumption of spherical platelets has a small effect on R compared to discoid platelets adhering flat against test section wall. However, an increase in average platelet volume resulted in a large decrease in R. Nonetheless, Monte Carlo simulations of a typical distribution of human platelet sizes show intrasubject variation in platelet size has only a 10 % net effect on R. Finally, experiments of thrombus formation show that platelet-surface lag times and platelet-platelet accumulation are similar for rectangular microfluidic test sections and round test sections when R >10. The findings show that the size of a microfluidic test section should be carefully considered in studies of cell-cell accumulation versus cell-surface adhesion.

  14. Heat accumulation during pulsed laser materials processing.

    PubMed

    Weber, Rudolf; Graf, Thomas; Berger, Peter; Onuseit, Volkher; Wiedenmann, Margit; Freitag, Christian; Feuer, Anne

    2014-05-05

    Laser materials processing with ultra-short pulses allows very precise and high quality results with a minimum extent of the thermally affected zone. However, with increasing average laser power and repetition rates the so-called heat accumulation effect becomes a considerable issue. The following discussion presents a comprehensive analytical treatment of multi-pulse processing and reveals the basic mechanisms of heat accumulation and its consequence for the resulting processing quality. The theoretical findings can explain the experimental results achieved when drilling microholes in CrNi-steel and for cutting of CFRP. As a consequence of the presented considerations, an estimate for the maximum applicable average power for ultra-shorts pulsed laser materials processing for a given pulse repetition rate is derived.

  15. Constant-Differential-Pressure Two-Fluid Accumulator

    NASA Technical Reports Server (NTRS)

    Piecuch, Benjamin; Dalton, Luke T.

    2010-01-01

    A two-fluid accumulator has been designed, built, and demonstrated to provide an acceptably close approximation to constant differential static pressure between two fluids over the full ranges of (1) accumulator stroke, (2) rates of flow of the fluids, and (3) common static pressure applied to the fluids. Prior differential- pressure two-fluid accumulators are generally not capable of maintaining acceptably close approximations to constant differential pressures. The inadequacies of a typical prior differential-pressure two-fluid accumulator can be summarized as follows: The static differential pressure is governed by the intrinsic spring rate (essentially, the stiffness) of an accumulator tank. The spring rate can be tailored through selection of the tank-wall thickness, selection of the number and/or shape of accumulator convolutions, and/or selection of accumulator material(s). Reliance on the intrinsic spring rate of the tank results in three severe limitations: (1) The spring rate and the expulsion efficiency tend to be inversely proportional to each other: that is to say, as the stiffness (and thus the differential pressure) is increased, the range of motion of the accumulator is reduced. (2) As the applied common static pressure increases, the differential pressure tends to decrease. An additional disadvantage, which may or may not be considered limiting, depending on the specific application, is that an increase in stiffness entails an increase in weight. (3) The additional weight required by a low expulsion efficiency accumulator eliminates the advantage given to such gas storage systems. The high expulsion efficiency provided by this two-fluid accumulator allows for a lightweight, tightly packaged system, which can be used in conjunction with a fuel cell-based system.

  16. Platelets from pulmonary hypertension patients show increased mitochondrial reserve capacity

    PubMed Central

    Nguyen, Quyen L.; Corey, Catherine; White, Pamela; Watson, Annie; Gladwin, Mark T.; Simon, Marc A.

    2017-01-01

    Accumulating evidence suggests that altered cellular metabolism is systemic in pulmonary hypertension (PH) and central to disease pathogenesis. However, bioenergetic changes in PH patients and their association with disease severity remain unclear. Here, we hypothesize that alteration in bioenergetic function is present in platelets from PH patients and correlates with clinical parameters of PH. Platelets isolated from controls and PH patients (n = 28) were subjected to extracellular flux analysis to determine oxygen consumption and glycolytic rates. Platelets from PH patients showed greater glycolytic rates than controls. Surprisingly, this was accompanied by significant increases in the maximal capacity for oxygen consumption, leading to enhanced respiratory reserve capacity in PH platelets. This increased platelet reserve capacity correlated with mean pulmonary artery pressure, pulmonary vascular resistance, and right ventricular stroke work index in PH patients and was abolished by the inhibition of fatty acid oxidation (FAO). Consistent with a shift to FAO, PH platelets showed augmented enzymatic activity of carnitine palmitoyltransferase-1 and electron transport chain complex II. These data extend the observation of a metabolic alteration in PH from the pulmonary vascular axis to the hematologic compartment and suggest that measurement of platelet bioenergetics is potentially useful in assessment of disease progression and severity. PMID:28289721

  17. Late 20th Century increase in South Pole snow accumulation

    USGS Publications Warehouse

    Mosley-Thompson, E.; Paskievitch, J.F.; Gow, A.J.; Thompson, L.G.

    1999-01-01

    A compilation of the 37-year history of net accumulation at the South Pole [Mosley-Thompson et al., 1995] suggests an increase in net annual accumulation since 1965. This record is sporadic and its quality is compromised by spatially restricted observations and nonsystematic measurement procedures. Results from a new, spatially extensive network of 236 accumulation poles document that the current 5-year (1992-1997) average annual net accumulation at the South Pole is 84.5??8.9 mm water equivalent (w.e.). This accumulation rate reflects a 30% increase since the 1960s when the best, although not optimal, records indicate that it was 65 mm w.e. Identification of two prominent beta radioactivity horizons (1954/1955 and 1964/1965) in six firn cores confirms an increase in accumulation since 1965. Viewed from a longer perspective of accumulation provided by ice cores and a snow mine study, the net accumulation of the 30-year period, 1965-1994, is the highest 30-year average of this millennium. Limited data suggest this recent accumulation increase extends beyond the South Pole region and may be characteristic of the high East Antarctic Plateau. Enhanced accumulation over the polar ice sheets has been identified as a potential early indicator of warmer sea surface temperatures and may offset a portion of the current rise in global sea level. Copyright 1999 by the American Geophysical Union.

  18. Ordinary differential equation for local accumulation time.

    PubMed

    Berezhkovskii, Alexander M

    2011-08-21

    Cell differentiation in a developing tissue is controlled by the concentration fields of signaling molecules called morphogens. Formation of these concentration fields can be described by the reaction-diffusion mechanism in which locally produced molecules diffuse through the patterned tissue and are degraded. The formation kinetics at a given point of the patterned tissue can be characterized by the local accumulation time, defined in terms of the local relaxation function. Here, we show that this time satisfies an ordinary differential equation. Using this equation one can straightforwardly determine the local accumulation time, i.e., without preliminary calculation of the relaxation function by solving the partial differential equation, as was done in previous studies. We derive this ordinary differential equation together with the accompanying boundary conditions and demonstrate that the earlier obtained results for the local accumulation time can be recovered by solving this equation.

  19. [Characteristics of dry matter and potassium accumulation and distribution in potato plant in semi-arid rainfed areas].

    PubMed

    Lu, Jian-Wu; Qiu, Hui-Zhen; Zhang, Wen-Ming; Wang, Di; Zhang, Jun-Lian; Zhang, Chun-Hong; Hou, Shu-Yin

    2013-02-01

    In 2010, a field experiment with potato (Solanum tuberosum) cultivar 'Xindaping' was conducted at the Dingxi Extension Center of Gansu Province, Northwest China, aimed to understand the accumulation and distribution patterns of dry matter (DM) and potassium (K) in the organs of potato plant in semi-arid rainfed areas. During the whole growth period of the cultivar, the DM accumulation in root, stem, and leaf all showed a unimodal curve, with the DM accumulation rate being leaf > stem > root, whereas the DM accumulation in whole plant and tuber was an S-curve. The maximum DM accumulation rate of the whole plant was higher than that of the tuber, and appeared 17 days earlier. The distribution of DM in different organs showed two turning points, i.e., during the tuber formation (TF) period and the tuber growth (TG) period. During TF period, the DM accumulation was the greatest in leaf, followed by in tuber. The TF period was also the DM balance period, which occurred 90 days after emergence. Before the DM balance period, the DM accumulation in tuber was lesser than that in root, stem, and leaf, and there was a positive correlation between the DM accumulation in tuber and in root, stem, and leaf. However, after the DM balance period, the DM accumulation in tuber was greater than that in root, stem, and leaf, and the correlation was negative. At seedling stage and in TF period, TG period, starch accumulation period, and maturity period, the DM accumulation in whole plant was 5%, 30%, 60%, 4% , and 1%, while that in tuber was 0,18% , 62 , 18% , and 2%, respectively. In the whole growth period, more than 50% of the DM was formed in TG period. The K concentration was the highest in stem and the lowest in tuber, though the K was mostly concentrated in root before the DM balance period. The K accumulation before the DM balance period was mostly in root, stem, and leaf, with the sequence of stem > leaf > root, but after the DM balance period, the K was mainly allocated in

  20. MODELING LONG-TERM DYNAMICS OF LITTER ACCUMULATION IN RESPONSE TO STATIC AND VARIABLE HYDROPERIODS

    EPA Science Inventory

    Accumulated litter from emergent species like the cattail hybrid (Typha glauca Godr.) can influence local abiotic conditions, other biota, and ecosystem processes. Litter accumulation results from high production coupled with slow breakdown rates. Wetland managers regularly mani...

  1. Sediment accumulation and mercury (Hg) flux in Avicennia marina forest of Deep Bay, China

    NASA Astrophysics Data System (ADS)

    Li, Ruili; Chai, Minwei; Guo, Meixian; Qiu, Guo Yu

    2016-08-01

    To investigate the rate of sediment accumulation and mercury (Hg) flux in Avicennia marina forest of Deep Bay, China, sediment cores were analyzed. The results showed that Hg concentrations were much higher at all depths compared to the background level. A high correlation between Hg and total organic carbon (TOC) indicated their similar anthropogenic origin. Sedimentation rate was estimated to be 1.38 cm a-1 by 210Pb geochronology. The increase in the mass sediment accumulation rates was rapid (range: 0.5-0.94 g cm-2 a-1), and the Hg fluxes ranged between 76 and 116 ng cm-2 a-1 during the last three decades. The reduction in both Hg concentrations and flux during the last decade may be due to the adoption of contamination control policies. Our results support the notion that the Hg fluxes determined from the sediment cores reveal the effects of anthropogenic influences from the areas around Deep Bay.

  2. Representation of accumulating evidence for a decision in two parietal areas.

    PubMed

    de Lafuente, Victor; Jazayeri, Mehrdad; Shadlen, Michael N

    2015-03-11

    Decisions are often made by accumulating evidence for and against the alternatives. The momentary evidence represented by sensory neurons is accumulated by downstream structures to form a decision variable, linking the evolving decision to the formation of a motor plan. When decisions are communicated by eye movements, neurons in the lateral intraparietal area (LIP) represent the accumulation of evidence bearing on the potential targets for saccades. We now show that reach-related neurons from the medial intraparietal area (MIP) exhibit a gradual modulation of their firing rates consistent with the representation of an evolving decision variable. When decisions were communicated by saccades instead of reaches, decision-related activity was attenuated in MIP, whereas LIP neurons were active while monkeys communicated decisions by saccades or reaches. Thus, for decisions communicated by a hand movement, a parallel flow of sensory information is directed to parietal areas MIP and LIP during decision formation.

  3. Representation of Accumulating Evidence for a Decision in Two Parietal Areas

    PubMed Central

    de Lafuente, Victor; Jazayeri, Mehrdad

    2015-01-01

    Decisions are often made by accumulating evidence for and against the alternatives. The momentary evidence represented by sensory neurons is accumulated by downstream structures to form a decision variable, linking the evolving decision to the formation of a motor plan. When decisions are communicated by eye movements, neurons in the lateral intraparietal area (LIP) represent the accumulation of evidence bearing on the potential targets for saccades. We now show that reach-related neurons from the medial intraparietal area (MIP) exhibit a gradual modulation of their firing rates consistent with the representation of an evolving decision variable. When decisions were communicated by saccades instead of reaches, decision-related activity was attenuated in MIP, whereas LIP neurons were active while monkeys communicated decisions by saccades or reaches. Thus, for decisions communicated by a hand movement, a parallel flow of sensory information is directed to parietal areas MIP and LIP during decision formation. PMID:25762677

  4. Peatlands as Dynamic Biogeochemical Ecotones: Elemental Concentrations, Stoichiometries and Accumulation in Peatland Soils of Ontario, Canada

    NASA Astrophysics Data System (ADS)

    Moore, T. R.; Wang, M.; Talbot, J.; Riley, J. L.

    2015-12-01

    Peatlands act as biogeochemical interfaces between terrestrial and aquatic systems and are 'hotspots', particularly for carbon cycling and the accumulation of nutrients and other elements within the peat profile. This results in storage of substantial amounts of carbon, nutrients and metals, particularly in northern peatlands. Using a data base of over 400 peat profiles and 1700 individual peat samples from bog, fen and swamp sites in Ontario, Canada, we examine the profile concentrations of C, N, P, Ca, Mg, K, Hg, Pb, As, Cu, Mn, Zn, Fe and Al, and estimate the storage and accumulation of these elements. We show how these profiles, spatial patterns, stoichiometries and accumulation rates are controlled by biogeochemical processes and influenced by geochemical setting, hydrology, atmospheric input and pollution, and ecological and microbial transformations.

  5. Role of transpiration in arsenic accumulation of hyperaccumulator Pteris vittata L.

    PubMed

    Wan, Xiao-ming; Lei, Mei; Chen, Tong-bin; Yang, Jun-xing; Liu, Hong-tao; Chen, Yang

    2015-11-01

    Mechanisms of Pteris vittata L. to hyperaccumulate arsenic (As), especially the efficient translocation of As from rhizoids to fronds, are not clear yet. The present study aims to investigate the role of transpiration in the accumulation of As from the aspects of transpiration regulation and ecotypic difference. Results showed that As accumulation of P. vittata increased proportionally with an increase in the As exposure concentration. Lowering the transpiration rate by 28∼67% decreased the shoot As concentration by 19∼56%. Comparison of As distribution under normal treatment and shade treatment indicated that transpiration determines the distribution pattern of As in pinnae. In terms of the ecotypic difference, the P. vittata ecotype from moister and warmer habitat had 40% higher transpiration and correspondingly 40% higher shoot As concentration than the ecotype from drier and cooler habitat. Results disclosed that transpiration is the main driver for P. vittata to accumulate and re-distribute As in pinnae.

  6. Geology and sediment accumulation rates at Carrie Bow Cay, Belize

    USGS Publications Warehouse

    Shinn, Eugene A.; Hudson, J. Harold; Halley, Robert B.; Lidz, Barbara H.; Robbin, Daniel M.; Macintyre, Ian G.; Ruetzler, Klaus; Macintyre, Ian G.

    1982-01-01

    Two other rotary cores were drilled landward of the reef crest. One was drilled on the reef flat to a depth of 8.8 m, and the other was drilled on the southwest tip of Carrie Bow Cay to a depth of 17.7 m. Both cores encountered essentially uncemented carbonate reef sands with some coral rubble. Of the four rotary cores, only the Carrie Bow Cay core encountered Pleistocene bedrock. Radiocarbon dating of a large head of Siderastrea siderea, growing on bedrock from the Carrie Bow Cay core at a depth of 15.04 m below sea level, gave an age of 6960±110 years. The leached calcitic coralline bedrock, at a depth of 15.7 m below sea level in the Carrie Bow Cay core, contained root marks, and iron staining indicative of subaerial exposure.

  7. 15. Detail showing lower chord pinconnected to vertical member, showing ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    15. Detail showing lower chord pin-connected to vertical member, showing floor beam riveted to extension of vertical member below pin-connection, and showing brackets supporting cantilevered sidewalk. View to southwest. - Selby Avenue Bridge, Spanning Short Line Railways track at Selby Avenue between Hamline & Snelling Avenues, Saint Paul, Ramsey County, MN

  8. Gypsum accumulation on carbonate stone

    USGS Publications Warehouse

    McGee, E.S.; Mossotti, V.G.

    1992-01-01

    The accumulation of gypsum on carbonate stone has been investigated through exposure of fresh samples of limestone and marble at monitored sites, through examination of alteration crusts from old buildings and through laboratory experiments. Several factors contribute to gypsum accumulation on carbonate stone. Marble or limestone that is sheltered from direct washing by rain in an urban environment with elevated pollution levels is likely to accumulate a gypsum crust. Crust development may be enhanced if the stone is porous or has an irregular surface area. Gypsum crusts are a surficial alteration feature; gypsum crystals form at the pore opening-air interface, where evaporation is greatest.

  9. A True Eddy Accumulation - Eddy Covariance hybrid for measurements of turbulent trace gas fluxes

    NASA Astrophysics Data System (ADS)

    Siebicke, Lukas

    2016-04-01

    Eddy covariance (EC) is state-of-the-art in directly and continuously measuring turbulent fluxes of carbon dioxide and water vapor. However, low signal-to-noise ratios, high flow rates and missing or complex gas analyzers limit it's application to few scalars. True eddy accumulation, based on conditional sampling ideas by Desjardins in 1972, requires no fast response analyzers and is therefore potentially applicable to a wider range of scalars. Recently we showed possibly the first successful implementation of True Eddy Accumulation (TEA) measuring net ecosystem exchange of carbon dioxide of a grassland. However, most accumulation systems share the complexity of having to store discrete air samples in physical containers representing entire flux averaging intervals. The current study investigates merging principles of eddy accumulation and eddy covariance, which we here refer to as "true eddy accumulation in transient mode" (TEA-TM). This direct flux method TEA-TM combines true eddy accumulation with continuous sampling. The TEA-TM setup is simpler than discrete accumulation methods while avoiding the need for fast response gas analyzers and high flow rates required for EC. We implemented the proposed TEA-TM method and measured fluxes of carbon dioxide (CO2), methane (CH4) and water vapor (H2O) above a mixed beech forest at the Hainich Fluxnet and ICOS site, Germany, using a G2301 laser spectrometer (Picarro Inc., USA). We further simulated a TEA-TM sampling system using measured high frequency CO2 time series from an open-path gas analyzer. We operated TEA-TM side-by-side with open-, enclosed- and closed-path EC flux systems for CO2, H2O and CH4 (LI-7500, LI-7200, LI-6262, LI-7700, Licor, USA, and FGGA LGR, USA). First results show that TEA-TM CO2 fluxes were similar to EC fluxes. Remaining differences were similar to those between the three eddy covariance setups (open-, enclosed- and closed-path gas analyzers). Measured TEA-TM CO2 fluxes from our physical

  10. Sequential biases in accumulating evidence

    PubMed Central

    Huggins, Richard; Dogo, Samson Henry

    2015-01-01

    Whilst it is common in clinical trials to use the results of tests at one phase to decide whether to continue to the next phase and to subsequently design the next phase, we show that this can lead to biased results in evidence synthesis. Two new kinds of bias associated with accumulating evidence, termed ‘sequential decision bias’ and ‘sequential design bias’, are identified. Both kinds of bias are the result of making decisions on the usefulness of a new study, or its design, based on the previous studies. Sequential decision bias is determined by the correlation between the value of the current estimated effect and the probability of conducting an additional study. Sequential design bias arises from using the estimated value instead of the clinically relevant value of an effect in sample size calculations. We considered both the fixed‐effect and the random‐effects models of meta‐analysis and demonstrated analytically and by simulations that in both settings the problems due to sequential biases are apparent. According to our simulations, the sequential biases increase with increased heterogeneity. Minimisation of sequential biases arises as a new and important research area necessary for successful evidence‐based approaches to the development of science. © 2015 The Authors. Research Synthesis Methods Published by John Wiley & Sons Ltd. PMID:26626562

  11. CONCEPTUAL MODEL FOR ORIGIN OF ABNORMALLY PRESSURED GAS ACCUMULATIONS IN LOW-PERMEABILITY RESERVOIRS.

    USGS Publications Warehouse

    Law, B.E.; Dickinson, W.W.

    1985-01-01

    The paper suggests that overpressured and underpressured gas accumulations of this type have a common origin. In basins containing overpressured gas accumulations, rates of thermogenic gas accumulation exceed gas loss, causing fluid (gas) pressure to rise above the regional hydrostatic pressure. Free water in the larger pores is forced out of the gas generation zone into overlying and updip, normally pressured, water-bearing rocks. While other diagenetic processes continue, a pore network with very low permeability develops. As a result, gas accumulates in these low-permeability reservoirs at rates higher than it is lost. In basins containing underpressured gas accumulations, rates of gas generation and accumulation are less than gas loss. The basin-center gas accumulation persists, but because of changes in the basin dynamics, the overpressured accumulation evolves into an underpressured system.

  12. Manganese As a Metal Accumulator

    EPA Science Inventory

    Manganese deposits in water distribution systems accumulate metals, radionuclides and oxyanions by a combination of surface complexation, adsorption and solid substitution, as well as a combination of oxidation followed by manganese reduction and sorption of the oxidized constitu...

  13. [Biosynthesis and accumulation of poly(3-hydroxybutyrate) in Vibrio natriegens].

    PubMed

    Liu, Shuang-Jiang

    2002-09-01

    Accumulation of poly(3-hydroxybutyrate) [poly(3HB)] by V. natriegens was studied. Results indicated that V. natriegens used glucose, gluconate, fructose and molasses as carbon sources for poly(3HB) synthesis. When molasses was used, up to 28.4% of poly(3HB) to cellular dry weight was accumulated. The accumulation of poly(3HB) followed, was not simultaneously to, the cell growth. Analysis of the PHA polymerase, beta-ketothiolase, and acetoacetyl-CoA reductase showed that the poly(3HB) accumulation was correlated to the increase of their activities in cells. Poly(3HB) accumulation was also related to the de novo fatty acid synthesis, as revealed by the results that cerulenin, a specific inhibitor to the de novo fatty acid synthesis, significantly reduced accumulation of poly(3HB). Based on the results from this study, the synthetic pathway of poly(3HB) was proposed.

  14. Accumulation of I-123 IMP in hepatic cell adenoma

    SciTech Connect

    Suto, Yuji; Kodama, Fumiko; Kato, Takashi

    1995-07-01

    I-123 IMP is now widely used as a radioactive material for cerebral blood flow scintigraphy. It is also known that this substance will accumulate in certain types of tumors. The authors present a case of a 47-year-old woman who showed accumulation of I-123 IMP in hepatic cell adenoma. 6 refs., 3 figs.

  15. Trehalose accumulation enhances tolerance of Saccharomyces cerevisiae to acetic acid.

    PubMed

    Yoshiyama, Yoko; Tanaka, Koichi; Yoshiyama, Kohei; Hibi, Makoto; Ogawa, Jun; Shima, Jun

    2015-02-01

    Trehalose confers protection against various environmental stresses on yeast cells. In this study, trehalase gene deletion mutants that accumulate trehalose at high levels showed significant stress tolerance to acetic acid. The enhancement of trehalose accumulation can thus be considered a target in the breeding of acetic acid-tolerant yeast strains.

  16. Plastic accumulation in the Mediterranean sea.

    PubMed

    Cózar, Andrés; Sanz-Martín, Marina; Martí, Elisa; González-Gordillo, J Ignacio; Ubeda, Bárbara; Gálvez, José Á; Irigoien, Xabier; Duarte, Carlos M

    2015-01-01

    Concentrations of floating plastic were measured throughout the Mediterranean Sea to assess whether this basin can be regarded as a great accumulation region of plastic debris. We found that the average density of plastic (1 item per 4 m2), as well as its frequency of occurrence (100% of the sites sampled), are comparable to the accumulation zones described for the five subtropical ocean gyres. Plastic debris in the Mediterranean surface waters was dominated by millimeter-sized fragments, but showed a higher proportion of large plastic objects than that present in oceanic gyres, reflecting the closer connection with pollution sources. The accumulation of floating plastic in the Mediterranean Sea (between 1,000 and 3,000 tons) is likely related to the high human pressure together with the hydrodynamics of this semi-enclosed basin, with outflow mainly occurring through a deep water layer. Given the biological richness and concentration of economic activities in the Mediterranean Sea, the affects of plastic pollution on marine and human life are expected to be particularly frequent in this plastic accumulation region.

  17. Plastic Accumulation in the Mediterranean Sea

    PubMed Central

    Cózar, Andrés; Sanz-Martín, Marina; Martí, Elisa; González-Gordillo, J. Ignacio; Ubeda, Bárbara; Gálvez, José Á.; Irigoien, Xabier; Duarte, Carlos M.

    2015-01-01

    Concentrations of floating plastic were measured throughout the Mediterranean Sea to assess whether this basin can be regarded as a great accumulation region of plastic debris. We found that the average density of plastic (1 item per 4 m2), as well as its frequency of occurrence (100% of the sites sampled), are comparable to the accumulation zones described for the five subtropical ocean gyres. Plastic debris in the Mediterranean surface waters was dominated by millimeter-sized fragments, but showed a higher proportion of large plastic objects than that present in oceanic gyres, reflecting the closer connection with pollution sources. The accumulation of floating plastic in the Mediterranean Sea (between 1,000 and 3,000 tons) is likely related to the high human pressure together with the hydrodynamics of this semi-enclosed basin, with outflow mainly occurring through a deep water layer. Given the biological richness and concentration of economic activities in the Mediterranean Sea, the affects of plastic pollution on marine and human life are expected to be particularly frequent in this plastic accumulation region. PMID:25831129

  18. Hey Teacher, Your Personality's Showing!

    ERIC Educational Resources Information Center

    Paulsen, James R.

    1977-01-01

    A study of 30 fourth, fifth, and sixth grade teachers and 300 of their students showed that a teacher's age, sex, and years of experience did not relate to students' mathematics achievement, but that more effective teachers showed greater "freedom from defensive behavior" than did less effective teachers. (DT)

  19. Planning a Successful Tech Show

    ERIC Educational Resources Information Center

    Nikirk, Martin

    2011-01-01

    Tech shows are a great way to introduce prospective students, parents, and local business and industry to a technology and engineering or career and technical education program. In addition to showcasing instructional programs, a tech show allows students to demonstrate their professionalism and skills, practice public presentations, and interact…

  20. Vegetation patches increase wind-blown litter accumulation in a semi-arid steppe of northern China

    NASA Astrophysics Data System (ADS)

    Yan, Yuchun; Xin, Xiaoping; Xu, Xingliang; Wang, Xu; Yan, Ruirui; Murray, Philip J.

    2016-12-01

    Litter decomposition is an important source of soil organic matter and nutrients; however, few studies have explored how vegetation patches affect wind-driven litter mobility and accumulation. In this study, we aimed to test the following hypotheses: (1) vegetation patches can reduce litter removal and facilitate litter accumulation, (2) litter mobility results in the heterogeneous redistribution of carbon and nutrients over the land surface, and (3) litter removal rates differ among different litter types (e.g., leaf and stem). Four vegetation patch types and six litter types were used to investigate the impacts of vegetation patches on litter mobility and accumulation. The results show that compared with almost bare ground patches, patches with vegetation cover had significantly higher litter accumulation, with the shrub patch type having the highest accumulation amount. The rate of litter removal due to wind was highest for the almost bare surface type (P4) and lowest for the shrub patch (P1) and Stipa grandis community (P2) types. There were significant differences in the removal rate among the different litter types. These findings indicate that wind-based litter redistribution among bare, S. grandis-dominated, and shrub-dominated patches is at least partially responsible for increasing the spatial heterogeneity of resources on a landscape scale.

  1. Theoretical lessons for increasing algal biofuel: Evolution of oil accumulation to avert carbon starvation in microalgae.

    PubMed

    Akita, Tetsuya; Kamo, Masashi

    2015-09-07

    Microalgae-derived oil is considered as a feasible alternative to fossil-derived oil. To produce more algal biomass, both algal population size and oil accumulation in algae must be maximized. Most of the previous studies have concentrated on only one of these issues, and relatively little attention has been devoted to considering the tradeoff between them. In this paper, we first theoretically investigated evolutionary reasons for oil accumulation and then by coupling population and evolutionary dynamics, we searched for conditions that may provide better yields. Using our model, we assume that algae allocate assimilated carbon to growth, maintenance, and carbon accumulation as biofuel and that the amount of essential materials (carbon and nitrate) are strongly linked in fixed proportions. Such stoichiometrically explicit models showed that (i) algae with more oil show slower population growth; therefore, the use of such algae results in lower total yields of biofuel and (ii) oil accumulation in algae is caused by carbon and not nitrate starvation. The latter can be interpreted as a strategy for avoiding the risk of increased death rate by carbon starvation. Our model also showed that both strong carbon starvation and moderately limited nitrate will promote total biofuel production. Our results highlight considering the life-history traits for a higher total yields of biofuel, which leads to insight into both establishing a prolonged culture and collection of desired strains from a natural environment.

  2. Satellite Animation Shows California Storms

    NASA Video Gallery

    This animation of visible and infrared imagery from NOAA's GOES-West satellite shows a series of moisture-laden storms affecting California from Jan. 6 through Jan. 9, 2017. TRT: 00:36 Credit: NASA...

  3. Satellite Movie Shows Erika Dissipate

    NASA Video Gallery

    This animation of visible and infrared imagery from NOAA's GOES-West satellite from Aug. 27 to 29 shows Tropical Storm Erika move through the Eastern Caribbean Sea and dissipate near eastern Cuba. ...

  4. Anthocyanins facilitate tungsten accumulation in Brassica

    SciTech Connect

    Hale, K.L.

    2002-11-01

    Accumulation of molybdenum in Brassica was recently found to be correlated with anthocyanin content, involving the formation of a blue complex. Here the role of anthocyanins in tungsten sequestration was investigated using three species of Brassica: B. rapa (cv. Fast plants), B. juncea (Indian mustard) and B. oleracea (red cabbage). Seedlings of B. rapa and B. juncea turned blue when supplied with colourless tungstate. The blue compound co-localized with anthocyanins in the peripheral cell layers, and the degree of blueness was correlated with anthocyanin content. The direct involvement of anthocyanins in the blue coloration was evident when purified anthocyanins showed a colour change from pink to blue in vitro upon addition of tungstate, over a wide pH range. Anthocyanin production was upregulated 3-fold by W in B. juncea, possibly reflecting a function for anthocyanins in W tolerance or sequestration. The presence of anthocyanins facilitated W accumulation in B. rapa: anthocyanin-containing seedlings accumulated 3-fold more W than an anthocyaninless mutant. There was no correlation between anthocyanin content and W tolerance under these conditions. The nature of the interaction between anthocyanins and tungstate was investigated. X-ray absorption spectroscopy showed no change in the local chemical environment of Wupon uptake of tungstate by the plant; HPLC analysis of purified anthocyanin with or without tungstate showed no peak shift after metal treatment.

  5. Impact on growth and aflatoxin B1 accumulation by Kluyveromyces isolates at different water activity conditions.

    PubMed

    Penna, Mariángeles La; Etcheverry, Miriam

    2006-11-01

    This study showed the impact on germination, mycelial growth and aflatoxin B(1) accumulation when interacting Aspergillus aflatoxigenic strains with Kluyveromyces isolates and the effect of water activity on this relationship. Isolates Y(14) and Y(16) reduced the percentage of germination of all Aspergillus strains and decrease germ tube elongation rate at majority of water activity assayed. Similarly they produced an increase of germination lag phase and lag phase of growth beside decreased growth rate of all Aspergillus strains. At water activities 0.994, 0.982, 0.955 and 0.937, no aflatoxins were produced in paired cultures with isolates Y(25,) Y(22), Y(16), and Y(14), and Kluyveromyces isolates Y(14) and Y(16) impact both growth and aflatoxin accumulation at wide range of water activity.

  6. Cultivation of a native alga for biomass and biofuel accumulation in coal bed methane production water

    USGS Publications Warehouse

    Hodgskiss, Logan H.; Nagy, Justin; Barnhart, Elliott P.; Cunningham, Alfred B.; Fields, Matthew W.

    2016-01-01

    Coal bed methane (CBM) production has resulted in thousands of ponds in the Powder River Basin of low-quality water in a water-challenged region. A green alga isolate, PW95, was isolated from a CBM production pond, and analysis of a partial ribosomal gene sequence indicated the isolate belongs to the Chlorococcaceae family. Different combinations of macro- and micronutrients were evaluated for PW95 growth in CBM water compared to a defined medium. A small level of growth was observed in unamended CBM water (0.15 g/l), and biomass increased (2-fold) in amended CBM water or defined growth medium. The highest growth rate was observed in CBM water amended with both N and P, and the unamended CBM water displayed the lowest growth rate. The highest lipid content (27%) was observed in CBM water with nitrate, and a significant level of lipid accumulation was not observed in the defined growth medium. Growth analysis indicated that nitrate deprivation coincided with lipid accumulation in CBM production water, and lipid accumulation did not increase with additional phosphorus limitation. The presented results show that CBM production wastewater can be minimally amended and used for the cultivation of a native, lipid-accumulating alga.

  7. Rapid development of an unusual peat-accumulating ecosystem in the Chilean Altiplano

    NASA Astrophysics Data System (ADS)

    Earle, Lisa R.; Warner, Barry G.; Aravena, Ramon

    2003-01-01

    Stratigraphic relationships, radiocarbon dating, sediment and peat characteristics, and rates of peat and carbon accumulation from a soligenous peatland, or "bofedal," in the Chilean Altiplano shows the peatland to be unusually young, dynamic, and sensitive to environmental changes. The site lies in the National Park Nevado de Tres Cruces in the puna desert grassland at an elevation of 4300 m a.s.l. Eight peat cores were extracted from a 1.75-km transect yielding a maximum of 3.6 m of organic sediment. Organic matter began to accumulate 1700-1100 cal yr B.P. under a progressively arid local climate, after a period when regional climate is believed to have been more humid than at present. Areas of greater relief and better drainage in the valley bottom eventually fostered the growth of a riparian cushion plant community after water flowing down the valley began to diminish. This led to rapid lateral expansion of the riparian peatland communities over open water in topographic depressions at a rate heretofore unprecedented in the peatland literature. It appears that development of the peatland has been encouraged by autoregulation of internal hydrology. The drainage impediment created by organic mass accumulation in lower-relief areas probably reduced the amount of water arriving at the lower reaches of the peatland. These areas have become progressively drier and have since died and oxidized. Through endogenous peat accumulation and a concomitant drainage impediment, the ecosystem has been migrating upstream over the past 50 years.

  8. Accelerated mutation accumulation in asexual lineages of a freshwater snail.

    PubMed

    Neiman, Maurine; Hehman, Gery; Miller, Joseph T; Logsdon, John M; Taylor, Douglas R

    2010-04-01

    Sexual reproduction is both extremely costly and widespread relative to asexual reproduction, meaning that it must also confer profound advantages in order to persist. One theorized benefit of sex is that it facilitates the clearance of harmful mutations, which would accumulate more rapidly in the absence of recombination. The extent to which ineffective purifying selection and mutation accumulation are direct consequences of asexuality and whether the accelerated buildup of harmful mutations in asexuals can occur rapidly enough to maintain sex within natural populations, however, remain as open questions. We addressed key components of these questions by estimating the rate of mutation accumulation in the mitochondrial genomes of multiple sexual and asexual representatives of Potamopyrgus antipodarum, a New Zealand snail characterized by mixed sexual/asexual populations. We found that increased mutation accumulation is associated with asexuality and occurs rapidly enough to be detected in recently derived asexual lineages of P. antipodarum. Our results demonstrate that increased mutation accumulation in asexuals can differentially affect coexisting and ecologically similar sexual and asexual lineages. The accelerated rate of mutation accumulation observed in asexual P. antipodarum provides some of the most direct evidence to date for a link between asexuality and mutation accumulation and implies that mutational buildup could be rapid enough to contribute to the short-term evolutionary mechanisms that favor sexual reproduction.

  9. Charge accumulation due to spin transport in magnetic multilayers

    NASA Astrophysics Data System (ADS)

    Zhu, Yao-Hui; Xu, Deng-Hui; Geng, Ai-Cong

    2014-08-01

    Starting with the Valet-Fert theory of the current-perpendicular-to-plane giant magnetoresistance, we studied the charge accumulation due to spin transport in magnetic multilayers by solving Poisson's equation analytically. Our results show that, in ferromagnetic layers, the charge accumulation has two exponential terms with opposite signs and different decaying lengths: the Thomas-Fermi screening length (on the order of angstrom) and the spin diffusion length (tens of nm in 3d ferromagnetic metals). The charge accumulation on the scale of the screening length is spin-unpolarized and also present in spin-independent transport in nonmagnetic multilayers. However, the charge accumulation on the scale of the spin diffusion length is spin-polarized and shows up only in ferromagnetic layers. Our analysis also provides new insights into the widely used quasi-neutrality approximation, which neglects the charge accumulation.

  10. Lipid Accumulation in Hypoxic Tissue Culture Cells

    PubMed Central

    Gordon, Gerald B.; Barcza, Maureen A.; Bush, Marilyn E.

    1977-01-01

    Lipid droplets have long been recognized by light microscopy to accumulate in hypoxic cells both in vivo and in vitro. In the present tissue culture experiments, correlative electron microscopic observations and lipid analyses were performed to determine the nature and significance of lipid accumulation in hypoxia. Strain L mouse fibroblasts were grown in suspension culture, both aerobically and under severe oxygen restriction obtained by gassing cultures daily with an 8% CO2-92% nitrogen mixture. After 48 hours, hypoxic cells showed an increase in total lipid/protein ratio of 42% over control cells. Most of this increase was accounted for by an elevation in the level of cellular triglyceride from 12.3 ± 0.9 μg/mg cell protein in aerobic cultures to 41.9 ± 0.7 in the hypoxic cultures, an increase of 240%. Levels of cellular free fatty acids (FFA) were 96% higher in the hypoxic cultures. No significant changes in the levels of cellular phospholipid or cholesterol were noted. Electron microscopic examination revealed the accumulation of homogeneous cytoplasmic droplets. The hypoxic changes were reversible upon transferring the cultures to aerobic atmospheres with disappearance of the lipid. These experiments indicate that hypoxic injury initially results in triglyceride and FFA accumulation from an inability to oxidize fatty acids taken up from the media and not from autophagic processes, as described in other types of cell injury associated with the sequestration of membranous residues and intracellular cholesterol and phospholipid accumulation. ImagesFigure 3Figure 4Figure 5Figure 6Figure 7Figure 1Figure 2 PMID:196505

  11. Old-growth forests can accumulate carbon in soils

    USGS Publications Warehouse

    Zhou, G.; Liu, S.; Li, Z.; Zhang, Dongxiao; Tang, X.; Zhou, C.; Yan, J.; Mo, J.

    2006-01-01

    Old-growth forests have traditionally been considered negligible as carbon sinks because carbon uptake has been thought to be balanced by respiration. We show that the top 20-centimeter soil layer in preserved old-growth forests in southern China accumulated atmospheric carbon at an unexpectedly high average rate of 0.61 megagrams of carbon hectare-1 year-1 from 1979 to 2003. This study suggests that the carbon cycle processes in the belowground system of these forests are changing in response to the changing environment. The result directly challenges the prevailing belief in ecosystem ecology regarding carbon budget in old-growth forests and supports the establishment of a new, nonequilibrium conceptual framework to study soil carbon dynamics.

  12. National Orange Show Photovoltaic Demonstration

    SciTech Connect

    Dan Jimenez Sheri Raborn, CPA; Tom Baker

    2008-03-31

    National Orange Show Photovoltaic Demonstration created a 400KW Photovoltaic self-generation plant at the National Orange Show Events Center (NOS). The NOS owns a 120-acre state fairground where it operates an events center and produces an annual citrus fair known as the Orange Show. The NOS governing board wanted to employ cost-saving programs for annual energy expenses. It is hoped the Photovoltaic program will result in overall savings for the NOS, help reduce the State's energy demands as relating to electrical power consumption, improve quality of life within the affected grid area as well as increase the energy efficiency of buildings at our venue. In addition, the potential to reduce operational expenses would have a tremendous effect on the ability of the NOS to service its community.

  13. Maximum likelihood decoding analysis of Accumulate-Repeat-Accumulate Codes

    NASA Technical Reports Server (NTRS)

    Abbasfar, Aliazam; Divsalar, Dariush; Yao, Kung

    2004-01-01

    Repeat-Accumulate (RA) codes are the simplest turbo-like codes that achieve good performance. However, they cannot compete with Turbo codes or low-density parity check codes (LDPC) as far as performance is concerned. The Accumulate Repeat Accumulate (ARA) codes, as a subclass of LDPC codes, are obtained by adding a pre-coder in front of RA codes with puncturing where an accumulator is chosen as a precoder. These codes not only are very simple, but also achieve excellent performance with iterative decoding. In this paper, the performance of these codes with (ML) decoding are analyzed and compared to random codes by very tight bounds. The weight distribution of some simple ARA codes is obtained, and through existing tightest bounds we have shown the ML SNR threshold of ARA codes approaches very closely to the performance of random codes. We have shown that the use of precoder improves the SNR threshold but interleaving gain remains unchanged with respect to RA code with puncturing.

  14. Crystal accumulation in the Hanford Waste Treatment Plant high level waste melter: Summary of FY2016 experiements

    SciTech Connect

    Fox, K.; Fowley, M.; Miller, D.

    2016-12-01

    Five experiments were completed with the full-scale, room temperature Hanford Waste Treatment and Immobilization Plant (WTP) high-level waste (HLW) melter riser test system to observe particle flow and settling in support of a crystal tolerant approach to melter operation. A prototypic pour rate was maintained based on the volumetric flow rate. Accumulation of particles was observed at the bottom of the riser and along the bottom of the throat after each experiment. Measurements of the accumulated layer thicknesses showed that the settled particles at the bottom of the riser did not vary in thickness during pouring cycles or idle periods. Some of the settled particles at the bottom of the throat were re-suspended during subsequent pouring cycles, and settled back to approximately the same thickness after each idle period. The cause of the consistency of the accumulated layer thicknesses is not year clear, but was hypothesized to be related to particle flow back to the feed tank. Additional experiments reinforced the observation of particle flow along a considerable portion of the throat during idle periods. Limitations of the system are noted in this report and may be addressed via future modifications. Follow-on experiments will be designed to evaluate the impact of pouring rate on particle re-suspension, the influence of feed tank agitation on particle accumulation, and the effect of changes in air lance positioning on the accumulation and re-suspension of particles at the bottom of the riser. A method for sampling the accumulated particles will be developed to support particle size distribution analyses. Thicker accumulated layers will be intentionally formed via direct addition of particles to select areas of the system to better understand the ability to continue pouring and re-suspend particles. Results from the room temperature system will be correlated with observations and data from the Research Scale Melter (RSM) at Pacific Northwest National Laboratory

  15. Effects of perchlorate on growth of four wetland plants and its accumulation in plant tissues.

    PubMed

    He, Hongzhi; Gao, Haishuo; Chen, Guikui; Li, Huashou; Lin, Hai; Shu, Zhenzhen

    2013-10-01

    Perchlorate contamination in water is of concern because of uncertainties about toxicity and health effects, impact on ecosystems, and possible indirect exposure pathways to humans. Therefore, it is very important to investigate the ecotoxicology of perchlorate and to screen plant species for phytoremediation. Effects of perchlorate (20, 200, and 500 mg/L) on the growth of four wetland plants (Eichhornia crassipes, Acorus calamus L., Thalia dealbata, and Canna indica) as well as its accumulation in different plant tissues were investigated through water culture experiments. Twenty milligrams per liter of perchlorate had no significant effects on height, root length, aboveground part weight, root weight, and oxidizing power of roots of four plants, except A. calamus, and increasing concentrations of perchlorate showed that out of the four wetland plants, only A. calamus had a significant (p<0.05) dose-dependent decrease in these parameters. When treated with 500 mg/L perchlorate, these parameters and chlorophyll content in the leaf of plants showed significant decline contrasted to control groups, except the root length of E. crassipes and C. indica. The order of inhibition rates of perchlorate on root length, aboveground part weight and root weight, and oxidizing power of roots was: A. calamus > C. indica > T. dealbata > E. crassipes and on chlorophyll content in the leaf it was: A. calamus > T. dealbata > C. indica > E. crassipes. The higher the concentration of perchlorate used, the higher the amount of perchlorate accumulation in plants. Perchlorate accumulation in aboveground tissues was much higher than that in underground tissues and leaf was the main tissue for perchlorate accumulation. The order of perchlorate accumulation content and the bioconcentration factor in leaf of four plants was: E. crassipes > C. indica > T. dealbata > A. calamus. Therefore, E. crassipes might be an ideal plant with high tolerance ability and accumulation ability for constructing

  16. Satellite detection of multi-decadal time series of cyanobacteria accumulations in the Baltic Sea

    NASA Astrophysics Data System (ADS)

    Kahru, M.; Elmgren, R.

    2014-02-01

    Cyanobacteria, primarily of the species Nodularia spumigena, form extensive surface accumulations in the Baltic Sea in July and August, ranging from diffuse flakes to dense surface scum. We describe the compilation of a 35 year (1979-2013) long time series of cyanobacteria surface accumulations in the Baltic Sea using multiple satellite sensors. This appears to be one of the longest satellite-based time series in biological oceanography. The satellite algorithm is based on increased remote sensing reflectance of the water in the red band, a measure of turbidity. Validation of the satellite algorithm using horizontal transects from a ship of opportunity showed the strongest relationship with phycocyanin fluorescence (an indicator of cyanobacteria), followed by turbidity and then by chlorophyll a fluorescence. The areal fraction with cyanobacteria accumulations (FCA) and the total accumulated area affected (TA) were used to characterize the intensity and extent of the accumulations. FCA was calculated as the ratio of the number of detected accumulations to the number of cloud free sea-surface views per pixel during the season (July-August). TA was calculated by adding the area of pixels where accumulations were detected at least once during the season. FCA and TA were correlated (R2 = 0.55) and both showed large interannual and decadal-scale variations. The average FCA was significantly higher for the 2nd half of the time series (13.8%, 1997-2013) than for the first half (8.6%, 1979-1996). However, that does not seem to represent a long-term trend but decadal-scale oscillations. Cyanobacteria accumulations were common in the 1970s and early 1980s (FCA between 11-17%), but rare (FCA below 4%) from 1985 to 1990; they increased again from 1991 and particularly from 1999, reaching maxima in FCA (~ 25%) and TA (~ 210 000 km2) in 2005 and 2008. After 2008 FCA declined to more moderate levels (6-17%). The timing of the accumulations has become earlier in the season, at a

  17. Carbon allocation and accumulation in conifers

    SciTech Connect

    Gower, S.T.; Isebrands, J.G.; Sheriff, D.W.

    1995-07-01

    Forests cover approximately 33% of the land surface of the earth, yet they are responsible for 65% of the annual carbon (C) accumulated by all terrestrial biomes. In general, total C content and net primary production rates are greater for forests than for other biomes, but C budgets differ greatly among forests. Despite several decades of research on forest C budgets, there is still an incomplete understanding of the factors controlling C allocation. Yet, if we are to understand how changing global events such as land use, climate change, atmospheric N deposition, ozone, and elevated atmospheric CO{sub 2} affect the global C budget, a mechanistic understanding of C assimilation, partitioning, and allocation is necessary. The objective of this chapter is to review the major factors that influence C allocation and accumulation in conifer trees and forests. In keeping with the theme of this book, we will focus primarily on evergreen conifers. However, even among evergreen conifers, leaf, canopy, and stand-level C and nutrient allocation patterns differ, often as a function of leaf development and longevity. The terminology related to C allocation literature is often inconsistent, confusing and inadequate for understanding and integrating past and current research. For example, terms often used synonymously to describe C flow or movement include translocation, transport, distribution, allocation, partitioning, apportionment, and biomass allocation. A common terminology is needed because different terms have different meanings to readers. In this paper we use C allocation, partitioning, and accumulation according to the definitions of Dickson and Isebrands (1993). Partitioning is the process of C flow into and among different chemical, storage, and transport pools. Allocation is the distribution of C to different plant parts within the plant (i.e., source to sink). Accumulation is the end product of the process of C allocation.

  18. Phyllodes tumor showing intraductal growth.

    PubMed

    Makidono, Akari; Tsunoda, Hiroko; Mori, Miki; Yagata, Hiroshi; Onoda, Yui; Kikuchi, Mari; Nozaki, Taiki; Saida, Yukihisa; Nakamura, Seigo; Suzuki, Koyu

    2013-07-01

    Phyllodes tumor of the breast is a rare fibroepithelial lesion and particularly uncommon in adolescent girls. It is thought to arise from the periductal rather than intralobular stroma. Usually, it is seen as a well-defined mass. Phyllodes tumor showing intraductal growth is extremely rare. Here we report a girl who has a phyllodes tumor with intraductal growth.

  19. Characterization of cadmium accumulation in willow as a woody metal accumulator using synchrotron radiation-based X-ray microanalyses.

    PubMed

    Harada, Emiko; Hokura, Akiko; Takada, Saori; Baba, Kei'ichi; Terada, Yasuko; Nakai, Izumi; Yazaki, Kazufumi

    2010-05-01

    Trees that accumulate metals are important plants for restoring contaminated soil because of their high biomass. We examined the cadmium (Cd) tolerance and growth rate of six willow (Salix) species common in Japan. To characterize in detail the localization of Cd and its ligands, synchrotron radiation-based micro X-ray fluorescence analysis was used. This revealed the accumulation of cadmium at the tips of the serrations in leaves, and the phellogen and/or the phelloderm under the stem surface. micro-X-ray absorption near edge structure spectra of Cd in all the accumulation sites were similar to that of the Cd ion coordinated by O ligands in S. gilgiana.

  20. Solar-Panel Dust Accumulation and Cleanings

    NASA Technical Reports Server (NTRS)

    2005-01-01

    Air-fall dust accumulates on the solar panels of NASA's Mars Exploration Rovers, reducing the amount of sunlight reaching the solar arrays. Pre-launch models predicted steady dust accumulation. However, the rovers have been blessed with occasional wind events that clear significant amounts of dust from the solar panels.

    This graph shows the effects of those panel-cleaning events on the amount of electricity generated by Spirit's solar panels. The horizontal scale is the number of Martian days (sols) after Spirit's Jan. 4, 2005, (Universal Time) landing on Mars. The vertical scale indicates output from the rover's solar panels as a fraction of the amount produced when the clean panels first opened. Note that the gradual declines are interrupted by occasional sharp increases, such as a dust-cleaning event on sol 420.

  1. Magic Carpet Shows Its Colors

    NASA Technical Reports Server (NTRS)

    2004-01-01

    The upper left image in this display is from the panoramic camera on the Mars Exploration Rover Spirit, showing the 'Magic Carpet' region near the rover at Gusev Crater, Mars, on Sol 7, the seventh martian day of its journey (Jan. 10, 2004). The lower image, also from the panoramic camera, is a monochrome (single filter) image of a rock in the 'Magic Carpet' area. Note that colored portions of the rock correlate with extracted spectra shown in the plot to the side. Four different types of materials are shown: the rock itself, the soil in front of the rock, some brighter soil on top of the rock, and some dust that has collected in small recesses on the rock face ('spots'). Each color on the spectra matches a line on the graph, showing how the panoramic camera's different colored filters are used to broadly assess the varying mineral compositions of martian rocks and soils.

  2. Rainfall Accumulation over the United States for December 2015

    NASA Video Gallery

    This animation shows the accumulation of rainfall over the United States during December 2015, from the IMERG precipitation dataset. The black outline indicates the Mississippi-Missouri River basin...

  3. Correlation between calcium and phosphate levels to calculus accumulation on coronary heart disease patients

    NASA Astrophysics Data System (ADS)

    Cahaya, Cindy; Masulili, Sri Lelyati C.; Lessang, Robert; Radi, Basuni

    2017-02-01

    Coronary Artery Disease (CAD) or Coronary Heart Disease (CHD) is a disease that happened because of blood flow being blocked by atherosclerosis. Atherosclerosis is a process of hardening of the arteries which characterized by thickening and loss of elasticity of the intimal layer of vascular wall, by lipid deposit. Periodontitis is a chronic multifactorial inflammatory disease caused by microorganism and characterized by progressive destruction of the tooth supporting apparatus leading to tooth loss. Many studies use saliva as a valuable source for clinically information, as an asset for early diagnosis, prognostic and reviewer for pascatherapy status. Dental calculus had happened as a consequence of saliva supersaturation by calcium and phosphate. Salivary flow rate and its composition influence the formation of calculus. Increasing salivary calcium levels is characteristic of periodontitis patients. An important hipotesis in Cardiology is chronic infections contribute in atherosclerosis. Objective: To analyse the correlation between calcium and phosphate levels in saliva to calculus accumulation on CHD patients. Result: Correlation analysis between salivary calcium levels with calculus accumulation in patients with CHD and non-CHD showed no significant p value, p=0.59 and p=0.518. Correlation analysis between salivary phosphate levels and calculus accumulation showed no significant p value, p=0.836 for CHD patients and p=0.484 for non-CHD patients. Conclusion: There are no correlation between calcium levels and phosphate levels with calculus accumulation in CHD patients. Further research need to be done.

  4. Sponges as sentinels: Metal accumulation using transplanted sponges across a metal gradient.

    PubMed

    Davis, Andrew R; de Mestre, Corrine; Maher, William; Krikowa, Frank; Broad, Allison

    2014-12-01

    To be effective sentinels, organisms must be able to be readily translocated to contamination hotspots. The authors sought to assess metal accumulation in genetically identical explants of a relatively common estuarine sponge, Suberites cf. diversicolor. Explants were transplanted to 7 locations across a metal contamination gradient in a large coastal estuary in southeastern Australia to establish, first, that explants of this species could be successfully translocated; second, that explants accumulated metals (cadmium, copper, lead, selenium, and zinc) sufficiently rapidly to be effective sentinels; third, that rates of metal accumulation in explants were in agreement with metal concentrations within sediments (<63-µm fraction) at each of the transplant locations; and finally, that changes in explant biomass correlated with overall metal load. Suberites were readily transplanted, with no mortality observed for the 2 mo of transplantation. Metal accumulation for lead, cadmium, and zinc was in close agreement with sediment metal concentrations, and explants showed dramatic increases in these metals in the heavily contaminated northern sections of the estuarine lake. No striking patterns were apparent for copper and selenium. Finally, growth was negatively correlated with total metal load and standardized total metal load in our explants. Taken together, these outcomes confirm that explants of this sponge are amenable to translocation and show considerable promise as biomonitors.

  5. Mineral transformation and biomass accumulation associated with uranium bioremediation at Rifle, Colorado

    SciTech Connect

    Li, L.; Steefel, C.I.; Williams, K.H.; Wilkins, M.J.; Hubbard, S.S.

    2009-04-20

    Injection of organic carbon into the subsurface as an electron donor for bioremediation of redox-sensitive contaminants like uranium often leads to mineral transformation and biomass accumulation, both of which can alter the flow field and potentially bioremediation efficacy. This work combines reactive transport modeling with a column experiment and field measurements to understand the biogeochemical processes and to quantify the biomass and mineral transformation/accumulation during a bioremediation experiment at a uranium contaminated site near Rifle, Colorado. We use the reactive transport model CrunchFlow to explicitly simulate microbial community dynamics of iron and sulfate reducers, and their impacts on reaction rates. The column experiment shows clear evidence of mineral precipitation, primarily in the form of calcite and iron monosulfide. At the field scale, reactive transport simulations suggest that the biogeochemical reactions occur mostly close to the injection wells where acetate concentrations are highest, with mineral precipitate and biomass accumulation reaching as high as 1.5% of the pore space. This work shows that reactive transport modeling coupled with field data can be an effective tool for quantitative estimation of mineral transformation and biomass accumulation, thus improving the design of bioremediation strategies.

  6. Dissociation between iron accumulation and ferritin upregulation in the aged substantia nigra: attenuation by dietary restriction

    PubMed Central

    Walker, Thomas; Michaelides, Christos; Ekonomou, Antigoni; Geraki, Kalotina; Parkes, Harold G; Suessmilch, Maria; Herlihy, Amy H; Crum, William R; So, Po-Wah

    2016-01-01

    Despite regulation, brain iron increases with aging and may enhance aging processes including neuroinflammation. Increases in magnetic resonance imaging transverse relaxation rates, R2 and R2*, in the brain have been observed during aging. We show R2 and R2* correlate well with iron content via direct correlation to semi-quantitative synchrotron-based X-ray fluorescence iron mapping, with age-associated R2 and R2* increases reflecting iron accumulation. Iron accumulation was concomitant with increased ferritin immunoreactivity in basal ganglia regions except in the substantia nigra (SN). The unexpected dissociation of iron accumulation from ferritin-upregulation in the SN suggests iron dyshomeostasis in the SN. Occurring alongside microgliosis and astrogliosis, iron dyshomeotasis may contribute to the particular vulnerability of the SN. Dietary restriction (DR) has long been touted to ameliorate brain aging and we show DR attenuated agerelated in vivo R2 increases in the SN over ages 7 – 19 months, concomitant with normal iron-induction of ferritin expression and decreased microgliosis. Iron is known to induce microgliosis and conversely, microgliosis can induce iron accumulation, which of these may be the initial pathological aging event warrants further investigation. We suggest iron chelation therapies and anti-inflammatory treatments may be putative ‘antibrain aging’ therapies and combining these strategies may be synergistic. PMID:27743512

  7. Arsenic accumulation by edible aquatic macrophytes.

    PubMed

    Falinski, K A; Yost, R S; Sampaga, E; Peard, J

    2014-01-01

    Edible aquatic macrophytes grown in arsenic (As)-contaminated soil and sediment were investigated to determine the extent of As accumulation and potential risk to humans when consumed. Nasturtium officinale (watercress) and Diplazium esculentum (warabi) are two aquatic macrophytes grown and consumed in Hawaii. Neither has been assessed for potential to accumulate As when grown in As-contaminated soil. Some former sugarcane plantation soils in eastern Hawaii have been shown to have concentrations of total As over 500 mg kg(-1). It was hypothesized that both species will accumulate more As in contaminated soils than in non-contaminated soils. N. officinale and D. esculentum were collected in areas with and without As-contaminated soil and sediment. High soil As concentrations averaged 356 mg kg(-1), while low soil As concentrations were 0.75 mg kg(-1). Average N. officinale and D. esculentum total As concentrations were 0.572 mg kg(-1) and 0.075 mg kg(-1), respectively, corresponding to hazard indices of 0.12 and 0.03 for adults. Unlike previous studies where watercress was grown in As-contaminated water, N. officinale did not show properties of a hyperaccumulator, yet plant concentrations in high As areas were more than double those in low As areas. There was a slight correlation between high total As in sediment and soil and total As concentrations in watercress leaves and stems, resulting in a plant uptake factor of 0.010, an order of magnitude higher than previous studies. D. esculentum did not show signs of accumulating As in the edible fiddleheads. Hawaii is unique in having volcanic ash soils with extremely high sorption characteristics of As and P that limit release into groundwater. This study presents a case where soils and sediments were significantly enriched in total As concentration, but the water As concentration was below detection limits.

  8. Conostegia xalapensis (Melastomataceae): an aluminum accumulator plant.

    PubMed

    González-Santana, Iris Hayde; Márquez-Guzmán, Judith; Cram-Heydrich, Silke; Cruz-Ortega, Rocio

    2012-02-01

    In acidic soils, an excess of Al³⁺ is toxic to most plants. The Melastomataceae family includes Al-accumulator genera that tolerate high Al³⁺ by accumulating it in their tissues. Conostegia xalapensis is a common shrub in Mexico and Central America colonizing mainly disturbed areas. Here, we determined whether C. xalapensis is an Al accumulator, and whether it has internal tolerance mechanisms to Al. Soil samples collected from two pastures in the state of Veracruz, Mexico, had low pH and high Al³⁺ concentrations along with low Ca²⁺ levels. Leaves of C. xalapensis from pastures showed up to 19,000 mg Al kg⁻¹ DW (dry weight). In laboratory experiments, 8-month-old seedlings treated with 0.5 and 1.0 mM AlCl₃ for 24 days showed higher number of lateral roots and biomass. Pyrocatechol violet and hematoxylin staining evidenced that Al localized in epidermis and mesophyll cells in leaves and in epidermis and vascular pith in roots. Scanning electron microscope-energy dispersive X-ray microanalysis of Al-treated leaves corroborated that Al is in abaxial and adaxial epidermis and in mesophyll cells (31.2%) in 1.0 mM Al-treatment. Roots of Al-treated plants had glutathione reductase (EC 1.6.4.2) and superoxide dismutase (EC 1.15.1.1) activity higher, and low levels of O₂*⁻ and H₂O₂. C. xalapensis is an Al-accumulator plant that can grow in acidic soils with higher Al³⁺ concentrations, and can be considered as an indicator species for soils with potential Al toxicity.

  9. Ion Trapping in the Accumulator

    SciTech Connect

    Marriner, J.

    1985-02-18

    The beam space charge (- for {bar p}'s) will attract positive ions. In the absence of additional fields (clearing electrodes, e.g.) these ions will be trapped in the beam potential well. The depth of this potential well has been calculated for some geometries relevant for the accumulator.

  10. "Medicine show." Alice in Doctorland.

    PubMed

    1987-01-01

    This is an excerpt from the script of a 1939 play provided to the Institute of Social Medicine and Community Health by the Library of Congress Federal Theater Project Collection at George Mason University Library, Fairfax, Virginia, pages 2-1-8 thru 2-1-14. The Federal Theatre Project (FTP) was part of the New Deal program for the arts 1935-1939. Funded by the Works Progress Administration (WPA) its goal was to employ theater professionals from the relief rolls. A number of FTP plays deal with aspects of medicine and public health. Pageants, puppet shows and documentary plays celebrated progress in medical science while examining social controversies in medical services and the public health movement. "Medicine Show" sharply contrasts technological wonders with social backwardness. The play was rehearsed by the FTP but never opened because funding ended. A revised version ran on Broadway in 1940. The preceding comments are adapted from an excellent, well-illustrated review of five of these plays by Barabara Melosh: "The New Deal's Federal Theatre Project," Medical Heritage, Vol. 2, No. 1 (Jan/Feb 1986), pp. 36-47.

  11. Accumulation of cytoplasmic calcium, but not apamin-sensitive afterhyperpolarization current, during high frequency firing in rat subthalamic nucleus cells

    PubMed Central

    Teagarden, Mark; Atherton, Jeremy F; Bevan, Mark D; Wilson, Charles J

    2008-01-01

    The autonomous firing pattern of neurons in the rat subthalamic nucleus (STN) is shaped by action potential afterhyperpolarization currents. One of these is an apamin-sensitive calcium-dependent potassium current (SK). The duration of SK current is usually considered to be limited by the clearance of calcium from the vicinity of the channel. When the cell is driven to fire faster, calcium is expected to accumulate, and this is expected to result in accumulation of calcium-dependent AHP current. We measured the time course of calcium transients in the soma and proximal dendrites of STN neurons during spontaneous firing and their accumulation during driven firing. We compared these to the time course and accumulation of AHP currents using whole-cell and perforated patch recordings. During spontaneous firing, a rise in free cytoplasmic calcium was seen after each action potential, and decayed with a time constant of about 200 ms in the soma, and 80 ms in the dendrites. At rates higher than 10 Hz, calcium transients accumulated as predicted. In addition, there was a slow calcium transient not predicted by summation of action potentials that became more pronounced at high firing frequency. Spike AHP currents were measured in voltage clamp as tail currents after 2 ms voltage pulses that triggered action currents. Apamin-sensitive AHP (SK) current was measured by subtraction of tail currents obtained before and after treatment with apamin. SK current peaked between 10 and 15 ms after an action potential, had a decay time constant of about 30 ms, and showed no accumulation. At frequencies between 5 and 200 spikes s−1, the maximal SK current remained the same as that evoked by a single action potential. AHP current did not have time to decay between action potentials, so at frequencies above 50 spikes s−1 the apamin-sensitive current was effectively constant. These results are inconsistent with the view that the decay of SK current is governed by calcium dynamics. They

  12. Accumulation of cytoplasmic calcium, but not apamin-sensitive afterhyperpolarization current, during high frequency firing in rat subthalamic nucleus cells.

    PubMed

    Teagarden, Mark; Atherton, Jeremy F; Bevan, Mark D; Wilson, Charles J

    2008-02-01

    The autonomous firing pattern of neurons in the rat subthalamic nucleus (STN) is shaped by action potential afterhyperpolarization currents. One of these is an apamin-sensitive calcium-dependent potassium current (SK). The duration of SK current is usually considered to be limited by the clearance of calcium from the vicinity of the channel. When the cell is driven to fire faster, calcium is expected to accumulate, and this is expected to result in accumulation of calcium-dependent AHP current. We measured the time course of calcium transients in the soma and proximal dendrites of STN neurons during spontaneous firing and their accumulation during driven firing. We compared these to the time course and accumulation of AHP currents using whole-cell and perforated patch recordings. During spontaneous firing, a rise in free cytoplasmic calcium was seen after each action potential, and decayed with a time constant of about 200 ms in the soma, and 80 ms in the dendrites. At rates higher than 10 Hz, calcium transients accumulated as predicted. In addition, there was a slow calcium transient not predicted by summation of action potentials that became more pronounced at high firing frequency. Spike AHP currents were measured in voltage clamp as tail currents after 2 ms voltage pulses that triggered action currents. Apamin-sensitive AHP (SK) current was measured by subtraction of tail currents obtained before and after treatment with apamin. SK current peaked between 10 and 15 ms after an action potential, had a decay time constant of about 30 ms, and showed no accumulation. At frequencies between 5 and 200 spikes s(-1), the maximal SK current remained the same as that evoked by a single action potential. AHP current did not have time to decay between action potentials, so at frequencies above 50 spikes s(-1) the apamin-sensitive current was effectively constant. These results are inconsistent with the view that the decay of SK current is governed by calcium dynamics. They

  13. Inertia-induced accumulation of flotsam in the subtropical gyres

    NASA Astrophysics Data System (ADS)

    Beron-Vera, F. J.; Olascoaga, M. J.; Lumpkin, R.

    2016-12-01

    Recent surveys of marine plastic debris density have revealed high levels in the center of the subtropical gyres. Earlier studies have argued that the formation of great garbage patches is due to Ekman convergence in such regions. In this work we report a tendency so far overlooked of drogued and undrogued drifters to accumulate distinctly over the subtropical gyres, with undrogued drifters accumulating in the same areas where plastic debris accumulate. We show that the observed accumulation is too fast for Ekman convergence to explain it. We demonstrate that the accumulation is controlled by finite-size and buoyancy (i.e., inertial) effects on undrogued drifter motion subjected to ocean current and wind drags. We infer that the motion of flotsam in general is constrained by similar effects. This is done by using a newly proposed Maxey-Riley equation which models the submerged (surfaced) drifter portion as a sphere of the fractional volume that is submerged (surfaced).

  14. Effects of ethanolamine and choline on thiotepa cellular accumulation and cytotoxicity in L1210 cells

    SciTech Connect

    Egorin, M.J.; Snyder, S.W.; Wietharn, B.E. )

    1990-07-15

    The amino alcohols, ethanolamine and choline, were studied for their effects on (a) L1210 cell growth, (b) N,N{prime},N{double prime}-triethylenetheiphosphoramide (thiotepa)-induced growth inhibition of L1210 cells, and (c) 14C accumulation by L1210 cells incubated with (14C)thiotepa. Ethanolamine, at concentrations up to 300 microM, had no effect on L1210 cell growth but, at concentrations greater than 300 microM, produced a dose-dependent reduction in cell growth. Choline, at concentrations up to 20 mM, had no effect on L1210 cell growth. Neither ethanolamine, at 250 microM, nor choline, at 10 mM, altered the ability of thiotepa to reduce L1210 cell growth. Neither ethanolamine, at 250 microM, nor choline, at 10 mM, affected the rapid phase of 14C accumulation by L1210 cells incubated with (14C)thiotepa. The slow phase of 14C accumulation by L1210 cells incubated with 5 microM (14C)thiotepa, a process which is 80-85% due to production of (14C)phosphatidylethanolamine, was not affected by 250 microM choline. In contrast, ethanolamine produced a dose-dependent reduction in this slow rate of 14C accumulation. The reduction in the slow rate of 14C accumulation produced by ethanolamine was due almost entirely to a decrease in the accumulation of nonexchangeable 14C. Kinetic analysis of the inhibition of 14C accumulation produced by 25, 100, and 250 microM ethanolamine was compatible with competitive inhibition. Thin layer chromatography of cell extracts showed that the ability of ethanolamine to reduce 14C accumulation by L1210 cells incubated with (14C)thiotepa was due solely to reduction in production of (14C)phosphatidylethanolamine. These results are all compatible with and predicted by our previously described scheme wherein thiotepa enters cells by simple diffusion and serves as a prodrug for aziridine.

  15. Cerebrospinal fluid analysis detects cerebral amyloid-β accumulation earlier than positron emission tomography.

    PubMed

    Palmqvist, Sebastian; Mattsson, Niklas; Hansson, Oskar

    2016-04-01

    including a positron emission tomography classification based on the florbetapir uptake in regions where the initial amyloid-β accumulation occurs in Alzheimer's disease. This is the first study to show that individuals who have abnormal cerebrospinal amyloid-β42 but normal amyloid-β positron emission tomography have an increased cortical amyloid-β accumulation rate similar to those with both abnormal cerebrospinal fluid and positron emission tomography and higher rate than subjects where both modalities are normal. The results indicate that cerebrospinal fluid amyloid-β42 becomes abnormal in the earliest stages of Alzheimer's disease, before amyloid positron emission tomography and before neurodegeneration starts.

  16. "Show me" bioethics and politics.

    PubMed

    Christopher, Myra J

    2007-10-01

    Missouri, the "Show Me State," has become the epicenter of several important national public policy debates, including abortion rights, the right to choose and refuse medical treatment, and, most recently, early stem cell research. In this environment, the Center for Practical Bioethics (formerly, Midwest Bioethics Center) emerged and grew. The Center's role in these "cultural wars" is not to advocate for a particular position but to provide well researched and objective information, perspective, and advocacy for the ethical justification of policy positions; and to serve as a neutral convener and provider of a public forum for discussion. In this article, the Center's work on early stem cell research is a case study through which to argue that not only the Center, but also the field of bioethics has a critical role in the politics of public health policy.

  17. Phoenix Scoop Inverted Showing Rasp

    NASA Technical Reports Server (NTRS)

    2008-01-01

    This image taken by the Surface Stereo Imager on Sol 49, or the 49th Martian day of the mission (July 14, 2008), shows the silver colored rasp protruding from NASA's Phoenix Mars Lander's Robotic Arm scoop. The scoop is inverted and the rasp is pointing up.

    Shown with its forks pointing toward the ground is the thermal and electrical conductivity probe, at the lower right. The Robotic Arm Camera is pointed toward the ground.

    The Phoenix Mission is led by the University of Arizona, Tucson, on behalf of NASA. Project management of the mission is led by NASA's Jet Propulsion Laboratory, Pasadena, Calif. Spacecraft development is by Lockheed Martin Space Systems, Denver.

  18. ShowMe3D

    SciTech Connect

    Sinclair, Michael B

    2012-01-05

    ShowMe3D is a data visualization graphical user interface specifically designed for use with hyperspectral image obtained from the Hyperspectral Confocal Microscope. The program allows the user to select and display any single image from a three dimensional hyperspectral image stack. By moving a slider control, the user can easily move between images of the stack. The user can zoom into any region of the image. The user can select any pixel or region from the displayed image and display the fluorescence spectrum associated with that pixel or region. The user can define up to 3 spectral filters to apply to the hyperspectral image and view the image as it would appear from a filter-based confocal microscope. The user can also obtain statistics such as intensity average and variance from selected regions.

  19. Hamming and Accumulator Codes Concatenated with MPSK or QAM

    NASA Technical Reports Server (NTRS)

    Divsalar, Dariush; Dolinar, Samuel

    2009-01-01

    In a proposed coding-and-modulation scheme, a high-rate binary data stream would be processed as follows: 1. The input bit stream would be demultiplexed into multiple bit streams. 2. The multiple bit streams would be processed simultaneously into a high-rate outer Hamming code that would comprise multiple short constituent Hamming codes a distinct constituent Hamming code for each stream. 3. The streams would be interleaved. The interleaver would have a block structure that would facilitate parallelization for high-speed decoding. 4. The interleaved streams would be further processed simultaneously into an inner two-state, rate-1 accumulator code that would comprise multiple constituent accumulator codes - a distinct accumulator code for each stream. 5. The resulting bit streams would be mapped into symbols to be transmitted by use of a higher-order modulation - for example, M-ary phase-shift keying (MPSK) or quadrature amplitude modulation (QAM). The novelty of the scheme lies in the concatenation of the multiple-constituent Hamming and accumulator codes and the corresponding parallel architectures of the encoder and decoder circuitry (see figure) needed to process the multiple bit streams simultaneously. As in the cases of other parallel-processing schemes, one advantage of this scheme is that the overall data rate could be much greater than the data rate of each encoder and decoder stream and, hence, the encoder and decoder could handle data at an overall rate beyond the capability of the individual encoder and decoder circuits.

  20. Effectiveness of hypolimnetic oxygenation for preventing accumulation of Fe and Mn in a drinking water reservoir.

    PubMed

    Munger, Zackary W; Carey, Cayelan C; Gerling, Alexandra B; Hamre, Kathleen D; Doubek, Jonathan P; Klepatzki, Spencer D; McClure, Ryan P; Schreiber, Madeline E

    2016-12-01

    The accumulation of Fe and Mn in seasonally stratified drinking water reservoirs adversely impacts water quality. To control issues with Fe and Mn at the source, some drinking water utilities have deployed hypolimnetic oxygenation systems to create well-oxygenated conditions in the water column that are favorable for the oxidation, and thus removal, of Fe and Mn. However, in addition to being controlled by dissolved oxygen (DO), Fe and Mn concentrations are also influenced by pH and metal-oxidizing microorganisms. We studied the response of Fe and Mn concentrations to hypolimnetic oxygenation in a shallow drinking water reservoir in Vinton, Virginia, USA by sequentially activating and deactivating an oxygenation system over two summers. We found that maintaining well-oxygenated conditions effectively prevented the accumulation of soluble Fe in the hypolimnion. However, while the rate of Mn oxidation increased under well-oxygenated conditions, soluble Mn still accumulated in the slightly acidic to neutral (pH 5.6 to 7.5) hypolimnion. In parallel, we conducted laboratory incubation experiments, which showed that the presence of Mn-oxidizing microorganisms increased the rate of Mn oxidation in comparison with rates under oxic, abiotic conditions. Combined, our field and laboratory results demonstrate that increasing DO concentrations in the water column is important for stimulating the oxidation of Fe and Mn, but that the successful management of Mn is also tied to the activity of Mn-oxidizing organisms in the water column and favorable (neutral to alkaline) pH.

  1. 2. 'THE ABOVE PICTURE SHOWS THE HEADGATE OF THE LAKEFORK ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    2. 'THE ABOVE PICTURE SHOWS THE HEADGATE OF THE LAKEFORK CANAL UNDER HIGH WATER DURING THE MONTH OF JUNE WITH MEN AT WORK REMOVING AN ACCUMULATION OF DRIFT WHICH FOR A SHORT TIME THREATENED THE DESTRUCTION OF THE HEADGATE DUE TO THE BACKING UP OF THE WATER.' 1930 - Irrigation Canals in the Uinta Basin, Duchesne, Duchesne County, UT

  2. 92. STARBOARD CATAPULT HYDRAULIC MANIFOLD FORWARD LOOKING AFT SHOWING ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    92. STARBOARD CATAPULT HYDRAULIC MANIFOLD - FORWARD LOOKING AFT SHOWING THE SEVEN (7) DISCHARGE LINES FROM THE SEVEN (7) HYDRAULIC PUMPS THROUGH SHUT-OFF VALVES TO ACCUMULATOR TANKS. - U.S.S. HORNET, Puget Sound Naval Shipyard, Sinclair Inlet, Bremerton, Kitsap County, WA

  3. Intracellular accumulation of ethanol in yeast

    SciTech Connect

    Loueiro, V.; Ferreira, H.G.

    1983-09-01

    Ethanol produced in the course of a batch fermentation by Saccharomyces cerevisiae or added from the outside, affects adversely the specific rate of growth of the yeast population, its viability, its specific rate of fermentation, and the specific rates of the uptake of sugar and amino acids. The underlying mechanisms are many and include irreversible denaturation and hyperbolic noncompetitive inhibition of glycolytic enzymes, the exponential noncompetitive inhibition of glucose, maltose, and ammonium transport, the depression of the optimum and the maximum temperature for growth, the increase of the minimum temperature for growth, and the enhancement of thermal death and petite mutation. Nagodawithana and Steinkraus reported that added ethanol was less toxic for S. cerevisiae than ethanol produced by the yeast. The death rates were lower in the presence of added ethanol than those measured at similar external ethanol concentrations endogenously produced. They proposed that, due to an unbalance between the rates of production and the net outflux of ethanol, there would be an intracellular accumulation of ethanol which in turn would explain the apparently greater inhibitory potency of endogenously produced ethanol present in the medium. This hypothesis was supported by the findings of several authors who reported that the intracellular concentration of ethanol, in the course of batch fermentation, is much higher than its concentration in the extracellular medium. The present work is an attempt to clarify this matter. (Refs. 32).

  4. Accumulation of perfluoroalkyl substances in human tissues.

    PubMed

    Pérez, Francisca; Nadal, Martí; Navarro-Ortega, Alícia; Fàbrega, Francesc; Domingo, José L; Barceló, Damià; Farré, Marinella

    2013-09-01

    Perfluoroalkyl substances (PFASs) are environmental pollutants with an important bioaccumulation potential. However, their metabolism and distribution in humans are not well studied. In this study, the concentrations of 21 PFASs were analyzed in 99 samples of autopsy tissues (brain, liver, lung, bone, and kidney) from subjects who had been living in Tarragona (Catalonia, Spain). The samples were analyzed by solvent extraction and online purification by turbulent flow and liquid chromatography coupled to tandem mass spectrometry. The occurrence of PFASs was confirmed in all human tissues. Although PFASs accumulation followed particular trends depending on the specific tissue, some similarities were found. In kidney and lung, perfluorobutanoic acid was the most frequent compound, and at highest concentrations (median values: 263 and 807ng/g in kidney and lung, respectively). In liver and brain, perfluorohexanoic acid showed the maximum levels (median: 68.3 and 141ng/g, respectively), while perfluorooctanoic acid was the most contributively in bone (median: 20.9ng/g). Lung tissues accumulated the highest concentration of PFASs. However, perfluorooctane sulfonic acid and perfluorooctanoic acid were more prevalent in liver and bone, respectively. To the best of our knowledge, the accumulation of different PFASs in samples of various human tissues from the same subjects is here reported for the very first time. The current results may be of high importance for the validation of physiologically based pharmacokinetic models, which are being developed for humans. However, further studies on the distribution of the same compounds in the human body are still required.

  5. Sodium Influx and Accumulation in Arabidopsis1

    PubMed Central

    Essah, Pauline A.; Davenport, Romola; Tester, Mark

    2003-01-01

    Arabidopsis is frequently used as a genetic model in plant salt tolerance studies, however, its physiological responses to salinity remain poorly characterized. This study presents a characterization of initial Na+ entry and the effects of Ca2+ on plant growth and net Na+ accumulation in saline conditions. Unidirectional Na+ influx was measured carefully using very short influx times in roots of 12-d-old seedlings. Influx showed three components with distinct sensitivities to Ca2+, diethylpyrocarbonate, and osmotic pretreatment. Pharmacological agents and known mutants were used to test the contribution of different transport pathways to Na+ uptake. Influx was stimulated by 4-aminobutyric acid and glutamic acid; was inhibited by flufenamate, quinine, and cGMP; and was insensitive to modulators of K+ and Ca2+ channels. Influx did not differ from wild type in akt1 and hkt1 insertional mutants. These data suggested that influx was mediated by several different types of nonselective cation channels. Na+ accumulation in plants grown in 50 mm NaCl was strongly reduced by increasing Ca2+ activity (from 0.05-3.0 mm), and plant survival was improved. However, plant biomass was not affected by shoot Na+ concentration, suggesting that in Arabidopsis Na+ toxicity is not dependent on shoot Na+ accumulation. These data suggest that Arabidopsis is a good model for investigation of Na+ transport, but may be of limited utility as a model for the study of Na+ toxicity. PMID:12970496

  6. Casimir experiments showing saturation effects

    SciTech Connect

    Sernelius, Bo E.

    2009-10-15

    We address several different Casimir experiments where theory and experiment disagree. First out is the classical Casimir force measurement between two metal half spaces; here both in the form of the torsion pendulum experiment by Lamoreaux and in the form of the Casimir pressure measurement between a gold sphere and a gold plate as performed by Decca et al.; theory predicts a large negative thermal correction, absent in the high precision experiments. The third experiment is the measurement of the Casimir force between a metal plate and a laser irradiated semiconductor membrane as performed by Chen et al.; the change in force with laser intensity is larger than predicted by theory. The fourth experiment is the measurement of the Casimir force between an atom and a wall in the form of the measurement by Obrecht et al. of the change in oscillation frequency of a {sup 87}Rb Bose-Einstein condensate trapped to a fused silica wall; the change is smaller than predicted by theory. We show that saturation effects can explain the discrepancies between theory and experiment observed in all these cases.

  7. Status of antiproton accumulation and cooling at Fermilab's Recycler

    SciTech Connect

    Prost, L.R.; Bhat, C.M.; Broemmelsiek, D.; Burov, A.; Carlson, K.; Crisp, J.; Derwent, P.; Eddy, N.; Gattuso, C.; Hu, M.; Pruss, S.; /Fermilab

    2009-08-01

    The Recycler ring is an 8 GeV permanent magnet storage ring where antiprotons are accumulated and prepared for Fermilab's Tevatron Collider program. With the goal of maximizing the integrated luminosity delivered to the experiments, storing, cooling and extracting antiprotons with high efficiency has been pursued. Over the past two years, while the average accumulation rate doubled, the Recycler continued to operate at a constant level of performance thanks to changes made to the Recycler Electron Cooler (energy stability and regulation, electron beam optics), RF manipulations and operating procedures. In particular, we discuss the current accumulation cycle in which {approx} 400 x 10{sup 10} antiprotons are accumulated and extracted to the Tevatron every {approx}15 hours.

  8. Metal accumulating plants: Medium's role

    NASA Astrophysics Data System (ADS)

    Rabier, J.; Prudent, P.; Szymanska, B.; Mevy, J.-P.

    2003-05-01

    To evaluate phytoremediation potentialities by metal accumulation in tolerant plants, trials are carried out using in vitro cultures. Organie compounds influence on metal accumulation is studied with metals supplemented media. The tested compounds on zinc and lead absorption by Brassica juncea, are chelating agents (EDTA, citric acid) and soluble organic fractions of compost. EDTA seems to enhance the transfer of lead in plant but it is the opposite in the case of zinc. Citric acid stimulates root absorption for both zinc and lead. For the aqueous extracts of compost, variable effects are obtained according to the origin of compost (green wastes and food wastes). In'all tested conditions of cultures, zinc is mainly exported towards shoot while lead is stored in root.

  9. Evidence Accumulation in Obsessive-Compulsive Disorder: the Role of Uncertainty and Monetary Reward on Perceptual Decision-Making Thresholds

    PubMed Central

    Banca, Paula; Vestergaard, Martin D; Rankov, Vladan; Baek, Kwangyeol; Mitchell, Simon; Lapa, Tatyana; Castelo-Branco, Miguel; Voon, Valerie

    2015-01-01

    The compulsive behaviour underlying obsessive-compulsive disorder (OCD) may be related to abnormalities in decision-making. The inability to commit to ultimate decisions, for example, patients unable to decide whether their hands are sufficiently clean, may reflect failures in accumulating sufficient evidence before a decision. Here we investigate the process of evidence accumulation in OCD in perceptual discrimination, hypothesizing enhanced evidence accumulation relative to healthy volunteers. Twenty-eight OCD patients and thirty-five controls were tested with a low-level visual perceptual task (random-dot-motion task, RDMT) and two response conflict control tasks. Regression analysis across different motion coherence levels and Hierarchical Drift Diffusion Modelling (HDDM) were used to characterize response strategies between groups in the RDMT. Patients required more evidence under high uncertainty perceptual contexts, as indexed by longer response time and higher decision boundaries. HDDM, which defines a decision when accumulated noisy evidence reaches a decision boundary, further showed slower drift rate towards the decision boundary reflecting poorer quality of evidence entering the decision process in patients under low uncertainty. With monetary incentives emphasizing speed and penalty for slower responses, patients decreased the decision thresholds relative to controls, accumulating less evidence in low uncertainty. These findings were unrelated to visual perceptual deficits and response conflict. This study provides evidence for impaired decision-formation processes in OCD, with a differential influence of high and low uncertainty contexts on evidence accumulation (decision threshold) and on the quality of evidence gathered (drift rates). It further emphasizes that OCD patients are sensitive to monetary incentives heightening speed in the speed-accuracy tradeoff, improving evidence accumulation. PMID:25425323

  10. Mimas Showing False Colors #1

    NASA Technical Reports Server (NTRS)

    2005-01-01

    False color images of Saturn's moon, Mimas, reveal variation in either the composition or texture across its surface.

    During its approach to Mimas on Aug. 2, 2005, the Cassini spacecraft narrow-angle camera obtained multi-spectral views of the moon from a range of 228,000 kilometers (142,500 miles).

    The image at the left is a narrow angle clear-filter image, which was separately processed to enhance the contrast in brightness and sharpness of visible features. The image at the right is a color composite of narrow-angle ultraviolet, green, infrared and clear filter images, which have been specially processed to accentuate subtle changes in the spectral properties of Mimas' surface materials. To create this view, three color images (ultraviolet, green and infrared) were combined into a single black and white picture that isolates and maps regional color differences. This 'color map' was then superimposed over the clear-filter image at the left.

    The combination of color map and brightness image shows how the color differences across the Mimas surface materials are tied to geological features. Shades of blue and violet in the image at the right are used to identify surface materials that are bluer in color and have a weaker infrared brightness than average Mimas materials, which are represented by green.

    Herschel crater, a 140-kilometer-wide (88-mile) impact feature with a prominent central peak, is visible in the upper right of each image. The unusual bluer materials are seen to broadly surround Herschel crater. However, the bluer material is not uniformly distributed in and around the crater. Instead, it appears to be concentrated on the outside of the crater and more to the west than to the north or south. The origin of the color differences is not yet understood. It may represent ejecta material that was excavated from inside Mimas when the Herschel impact occurred. The bluer color of these materials may be caused by subtle differences in

  11. Mechanisms of intrahepatic triglyceride accumulation

    PubMed Central

    Ress, Claudia; Kaser, Susanne

    2016-01-01

    Hepatic steatosis defined as lipid accumulation in hepatocytes is very frequently found in adults and obese adolescents in the Western World. Etiologically, obesity and associated insulin resistance or excess alcohol intake are the most frequent causes of hepatic steatosis. However, steatosis also often occurs with chronic hepatitis C virus (HCV) infection and is also found in rare but potentially life-threatening liver diseases of pregnancy. Clinical significance and outcome of hepatic triglyceride accumulation are highly dependent on etiology and histological pattern of steatosis. This review summarizes current concepts of pathophysiology of common causes of hepatic steatosis, including non-alcoholic fatty liver disease (NAFLD), alcoholic fatty liver disease, chronic HCV infections, drug-induced forms of hepatic steatosis, and acute fatty liver of pregnancy. Regarding the pathophysiology of NAFLD, this work focuses on the close correlation between insulin resistance and hepatic triglyceride accumulation, highlighting the potential harmful effects of systemic insulin resistance on hepatic metabolism of fatty acids on the one side and the role of lipid intermediates on insulin signalling on the other side. Current studies on lipid droplet morphogenesis have identified novel candidate proteins and enzymes in NAFLD. PMID:26819531

  12. Velocity of chloroplast avoidance movement is fluence rate dependent.

    PubMed

    Kagawa, Takatoshi; Wada, Masamitsu

    2004-06-01

    In Arabidopsis leaves, chloroplast movement is fluence rate dependent. At optimal, lower light fluences, chloroplasts accumulate at the cell surface to maximize photosynthetic potential. Under high fluence rates, chloroplasts avoid incident light to escape photodamage. In this paper, we examine the phenomenon of chloroplast avoidance movement in greater detail and demonstrate a proportional relationship between fluence rate and the velocity of chloroplast avoidance. In addition we show that the amount of light-activated phototropin2, the photoreceptor for the avoidance response, likely plays a role in this phenomenon, as heterozygous mutant plants show a reduced avoidance velocity compared to that of homozygous wild type plants.

  13. STD studies show spermicides protect against Chlamydia.

    PubMed

    1986-01-01

    Evidence which suggests that spermicides provide protection against sexually transmitted diseases (STDs) is accumulating. Laboratory tests have repeatedly demonstrated that spermicides are capable of killing the bacteria responsible for several types of STDs, as well as the virus responsible for acquired immunodeficiency syndrome. Recently, studies conducted in Bangkok, Thailand and in New York City suggest that these protective effects are not confined to the laboratory but that they also occur among women who use spermicides in the real world. In the New York City study, Family Health International (FHI), using data collected by Planned Parenthood of New York City, compared STD prevalence rates for women using different contraceptive methods. Women who used spermicides, in comparison with women who used oral contraceptives (OCs), were 20% less likely to have contracted a STD, 30% less likely to have gonorrhea, and 60% less likely to have chlamydia. In the Thai study, conducted jointly by the FHI and the Ministry of Health, women at high risk of STDs were allocated either to a group which was instructed to use a vaginal sponge impregnated with nonoxynol-9 during intercourse or to a control group which received no vaginal contraceptives. All the women were either sterilized or using OCs, IUDs, or injectable contraceptives. Preliminary results suggest that the women who used the vaginal sponges were significantly less likely to contract chlamydia than the control group. In regard to the incidence of gonorrhea, no differences between the 2 groups was detected. In the Thai study methodological problems forced the researchers to redesign the study. In accordance with the new design, the women in the 2 groups will be crossed over after 6 weeks. This will allow the researchers to examine the effect of using or not using a vaginal spermicide on specific individuals. The findings of the 2 studies have special relevance given the increasing prevalence of STDs in many

  14. Distinct relationships of parietal and prefrontal cortices to evidence accumulation

    PubMed Central

    Hanks, Timothy; Kopec, Charles D.; Brunton, Bingni W.; Duan, Chunyu A.; Erlich, Jeffrey C.; Brody, Carlos D.

    2014-01-01

    Gradual accumulation of evidence is thought to be fundamental for decision-making, and its neural correlates have been found in multiple brain regions1–8. Here we develop a generalizable method to measure tuning curves that specify the relationship between neural responses and mentally-accumulated evidence, and apply it to distinguish the encoding of decision variables in posterior parietal cortex (PPC) and prefrontal cortex (frontal orienting fields, FOF). We recorded the firing rates of neurons in PPC and FOF from rats performing a perceptual decision-making task. Classical analyses uncovered correlates of accumulating evidence, similar to previous observations in primates and also similar across the two regions. However, tuning curve assays revealed that while the PPC encodes a graded value of the accumulating evidence, the FOF has a more categorical encoding that indicates, throughout the trial, the decision provisionally favored by the evidence accumulated so far. Contrary to current views3,5,7–9, this suggests that premotor activity in frontal cortex does not play a role in the accumulation process, but instead has a more categorical function, such as transforming accumulated evidence into a discrete choice. To causally probe the role of FOF activity, we optogenetically silenced it during different timepoints of the trial. Consistent with a role in committing to a categorical choice at the end of the evidence accumulation process, but not consistent with a role during the accumulation itself, a behavioral effect was observed only when FOF silencing occurred at the end of the perceptual stimulus. Our results place important constraints on the circuit logic of brain regions involved in decision-making. PMID:25600270

  15. Temporal Patterns of Snow Accumulation and the Effect of Nearby Summit, Greenland

    NASA Astrophysics Data System (ADS)

    Kelson, J.; Hawley, R. L.; Lutz, E.

    2012-12-01

    The mass balance of a glacier reflects how the mass of the ice sheet changes over time, which reflects climate change and could affect sea level rise. The rate at which snow accumulates is essential for calculating the mass balance of the Greenland ice sheet. We examine the accumulation measured monthly from 2006 to 2011 at 121 stakes in a stepping line near Summit, Greenland. We investigate the temporal patterns in accumulation with a monthly resolution. We find that seasonally, September experiences the most accumulation. We also determine that there is no significant change in accumulation rates over the study period. We then examine the spatial patterns of accumulation in order to determine if the accumulation record from the stakes can be considered an accurate estimate for regional accumulation patterns. We find that the accumulation surface is very smooth at our sampling scale; there are no ridge or trough features that might cause unrepresentative data. However, the stake line experiences increased accumulation in the South, which may be a snowdrift caused by the structures of nearby Summit Camp. Considering the possibility of drift from Summit, the accumulation measurements near the southern end of the stake line cannot be used as a regional estimate for accumulation.

  16. Biomass accumulation modelling in a highly loaded biotrickling filter for hydrogen sulphide removal.

    PubMed

    Mannucci, Alberto; Munz, Giulio; Mori, Gualtiero; Lubello, Claudio

    2012-07-01

    A pilot scale test on a biotrickling filter packed with polyurethane foam cubes was carried out for 110 d at high volumetric mass load (up to 280 g m(bed)(-3) h(-1)) with the aim of studying the accumulation of solids in the treatment of H(2)S. Removal rate up to 245 g m(bed)(-3) h(-1) was obtained; however, an accumulation of gypsum, elemental sulphur and, above all, inert biomass was identified as the cause of an increased pressure drop over the long term. A mathematical model was applied and calibrated with the experimental results to describe the accumulation of biomass. The model was capable of describing the accumulation of solids and, corresponding to a solids retention time of 50 d, the observed yield resulted in 0.07 g of solids produced g(-1) H(2)S removed. Respirometric tests showed that heterotrophic activity is inhibited at low pH (pH < 2.3), and the contribution to biomass removal through decay was negligible.

  17. Complex forest dynamics indicate potential for slowing carbon accumulation in the southeastern United States

    PubMed Central

    Coulston, John W.; Wear, David N.; Vose, James M.

    2015-01-01

    Over the past century forest regrowth in Europe and North America expanded forest carbon (C) sinks and offset C emissions but future C accumulation is uncertain. Policy makers need insights into forest C dynamics as they anticipate emissions futures and goals. We used land use and forest inventory data to estimate how forest C dynamics have changed in the southeastern United States and attribute changes to land use, management, and disturbance causes. From 2007-2012, forests yielded a net sink of C because of net land use change (+6.48 Tg C yr−1) and net biomass accumulation (+75.4 Tg C yr−1). Forests disturbed by weather, insect/disease, and fire show dampened yet positive forest C changes (+1.56, +1.4, +5.48 Tg C yr−1, respectively). Forest cutting caused net decreases in C (−76.7 Tg C yr−1) but was offset by forest growth (+143.77 Tg C yr−1). Forest growth rates depend on age or stage of development and projected C stock changes indicate a gradual slowing of carbon accumulation with anticipated forest aging (a reduction of 9.5% over the next five years). Additionally, small shifts in land use transitions consistent with economic futures resulted in a 40.6% decrease in C accumulation. PMID:25614123

  18. Complex forest dynamics indicate potential for slowing carbon accumulation in the southeastern United States

    NASA Astrophysics Data System (ADS)

    Coulston, John W.; Wear, David N.; Vose, James M.

    2015-01-01

    Over the past century forest regrowth in Europe and North America expanded forest carbon (C) sinks and offset C emissions but future C accumulation is uncertain. Policy makers need insights into forest C dynamics as they anticipate emissions futures and goals. We used land use and forest inventory data to estimate how forest C dynamics have changed in the southeastern United States and attribute changes to land use, management, and disturbance causes. From 2007-2012, forests yielded a net sink of C because of net land use change (+6.48 Tg C yr-1) and net biomass accumulation (+75.4 Tg C yr-1). Forests disturbed by weather, insect/disease, and fire show dampened yet positive forest C changes (+1.56, +1.4, +5.48 Tg C yr-1, respectively). Forest cutting caused net decreases in C (-76.7 Tg C yr-1) but was offset by forest growth (+143.77 Tg C yr-1). Forest growth rates depend on age or stage of development and projected C stock changes indicate a gradual slowing of carbon accumulation with anticipated forest aging (a reduction of 9.5% over the next five years). Additionally, small shifts in land use transitions consistent with economic futures resulted in a 40.6% decrease in C accumulation.

  19. Selenocystamine improves protein accumulation in chloroplasts of eukaryotic green algae.

    PubMed

    Ferreira-Camargo, Livia S; Tran, Miller; Beld, Joris; Burkart, Michael D; Mayfield, Stephen P

    2015-12-01

    Eukaryotic green algae have become an increasingly popular platform for recombinant proteins production. In particular, Chlamydomonas reinhardtii, has garnered increased attention for having the necessary biochemical machinery to produce vaccines, human antibodies and next generation cancer targeting immunotoxins. While it has been shown that chloroplasts contain chaperones, peptidyl prolylisomerases and protein disulfide isomerases that facilitate these complex proteins folding and assembly, little has been done to determine which processes serve as rate-limiting steps for protein accumulation. In other expression systems, as Escherichia coli, Chinese hamster ovary cells, and insect cells, recombinant protein accumulation can be hampered by cell's inability to fold the target polypeptide into the native state, resulting in aggregation and degradation. To determine if chloroplasts' ability to oxidize proteins that require disulfide bonds into a stable conformation is a rate-limiting step of protein accumulation, three recombinant strains, each expressing a different recombinant protein, were analyzed. These recombinant proteins included fluorescent GFP, a reporter containing no disulfide bonds; Gaussia princeps luciferase, a luminescent reporter containing disulfide bonds; and an immunotoxin, an antibody-fusion protein containing disulfide bonds. Each strain was analyzed for its ability to accumulate proteins when supplemented with selenocystamine, a small molecule capable of catalyzing the formation of disulfide bonds. Selenocystamine supplementation led to an increase in luciferase and immunotoxin but not GFP accumulation. These results demonstrated that selenocystamine can increase the accumulation of proteins containing disulfide bonds and suggests that a rate-limiting step in chloroplast protein accumulation is the disulfide bonds formation in recombinant proteins native structure.

  20. Neurodegeneration with Brain Iron Accumulation: An Overview

    PubMed Central

    TONEKABONI, Seyed Hassan; MOLLAMOHAMMADI, Mohsen

    2014-01-01

    Objective Neurodegeneration with brain iron accumulation (NBIA) is a group of neurodegenerative disorder with deposition of iron in the brain (mainly Basal Ganglia) leading to a progressive Parkinsonism, spasticity, dystonia, retinal degeneration, optic atrophy often accompanied by psychiatric manifestations and cognitive decline. 8 of the 10 genetically defined NBIA types are inherited as autosomal recessive and the remaining two by autosomal dominant and X-linked dominant manner. Brain MRI findings are almost specific and show abnormal brain iron deposition in basal ganglia some other related anatomical locations. In some types of NBIA cerebellar atrophy is the major finding in MRI. PMID:25657764

  1. Dystonia in neurodegeneration with brain iron accumulation: outcome of bilateral pallidal stimulation

    PubMed Central

    Pauls, K. A. M.; Wieland, K.; Jech, R.; Kurlemann, G.; Sharma, N.; Gill, S. S.; Haenggeli, C. A.; Hayflick, S. J.; Hogarth, P.; Leenders, K. L.; Limousin, P.; Malanga, C. J.; Moro, E.; Ostrem, J. L.; Revilla, F. J.; Santens, P.; Schnitzler, A.; Tisch, S.; Valldeoriola, F.; Vesper, J.; Volkmann, J.; Woitalla,, D.; Peker, S.

    2010-01-01

    Neurodegeneration with brain iron accumulation encompasses a heterogeneous group of rare neurodegenerative disorders that are characterized by iron accumulation in the brain. Severe generalized dystonia is frequently a prominent symptom and can be very disabling, causing gait impairment, difficulty with speech and swallowing, pain and respiratory distress. Several case reports and one case series have been published concerning therapeutic outcome of pallidal deep brain stimulation in dystonia caused by neurodegeneration with brain iron degeneration, reporting mostly favourable outcomes. However, with case studies, there may be a reporting bias towards favourable outcome. Thus, we undertook this multi-centre retrospective study to gather worldwide experiences with bilateral pallidal deep brain stimulation in patients with neurodegeneration with brain iron accumulation. A total of 16 centres contributed 23 patients with confirmed neurodegeneration with brain iron accumulation and bilateral pallidal deep brain stimulation. Patient details including gender, age at onset, age at operation, genetic status, magnetic resonance imaging status, history and clinical findings were requested. Data on severity of dystonia (Burke Fahn Marsden Dystonia Rating Scale—Motor Scale, Barry Albright Dystonia Scale), disability (Burke Fahn Marsden Dystonia Rating Scale—Disability Scale), quality of life (subjective global rating from 1 to 10 obtained retrospectively from patient and caregiver) as well as data on supportive therapy, concurrent pharmacotherapy, stimulation settings, adverse events and side effects were collected. Data were collected once preoperatively and at 2–6 and 9–15 months postoperatively. The primary outcome measure was change in severity of dystonia. The mean improvement in severity of dystonia was 28.5% at 2–6 months and 25.7% at 9–15 months. At 9–15 months postoperatively, 66.7% of patients showed an improvement of 20% or more in severity of dystonia

  2. Tissue-specific mutation accumulation in human adult stem cells during life

    NASA Astrophysics Data System (ADS)

    Blokzijl, Francis; de Ligt, Joep; Jager, Myrthe; Sasselli, Valentina; Roerink, Sophie; Sasaki, Nobuo; Huch, Meritxell; Boymans, Sander; Kuijk, Ewart; Prins, Pjotr; Nijman, Isaac J.; Martincorena, Inigo; Mokry, Michal; Wiegerinck, Caroline L.; Middendorp, Sabine; Sato, Toshiro; Schwank, Gerald; Nieuwenhuis, Edward E. S.; Verstegen, Monique M. A.; van der Laan, Luc J. W.; de Jonge, Jeroen; Ijzermans, Jan N. M.; Vries, Robert G.; van de Wetering, Marc; Stratton, Michael R.; Clevers, Hans; Cuppen, Edwin; van Boxtel, Ruben

    2016-10-01

    The gradual accumulation of genetic mutations in human adult stem cells (ASCs) during life is associated with various age-related diseases, including cancer. Extreme variation in cancer risk across tissues was recently proposed to depend on the lifetime number of ASC divisions, owing to unavoidable random mutations that arise during DNA replication. However, the rates and patterns of mutations in normal ASCs remain unknown. Here we determine genome-wide mutation patterns in ASCs of the small intestine, colon and liver of human donors with ages ranging from 3 to 87 years by sequencing clonal organoid cultures derived from primary multipotent cells. Our results show that mutations accumulate steadily over time in all of the assessed tissue types, at a rate of approximately 40 novel mutations per year, despite the large variation in cancer incidence among these tissues. Liver ASCs, however, have different mutation spectra compared to those of the colon and small intestine. Mutational signature analysis reveals that this difference can be attributed to spontaneous deamination of methylated cytosine residues in the colon and small intestine, probably reflecting their high ASC division rate. In liver, a signature with an as-yet-unknown underlying mechanism is predominant. Mutation spectra of driver genes in cancer show high similarity to the tissue-specific ASC mutation spectra, suggesting that intrinsic mutational processes in ASCs can initiate tumorigenesis. Notably, the inter-individual variation in mutation rate and spectra are low, suggesting tissue-specific activity of common mutational processes throughout life.

  3. Crystal accumulation in the Hanford Waste Treatment Plant high level waste melter. Preliminary settling and resuspension testing

    SciTech Connect

    Fox, K. M.; Fowley, M. D.; Miller, D. H.

    2016-05-01

    The full-scale, room-temperature Hanford Tank Waste Treatment and Immobilization Plant (WTP) High-Level Waste (HLW) melter riser test system was successfully operated with silicone oil and magnetite particles at a loading of 0.1 vol %. Design and construction of the system and instrumentation, and the selection and preparation of simulant materials, are briefly reviewed. Three experiments were completed. A prototypic pour rate was maintained, based on the volumetric flow rate. Settling and accumulation of magnetite particles were observed at the bottom of the riser and along the bottom of the throat after each experiment. The height of the accumulated layer at the bottom of the riser, after the first pouring experiment, approximated the expected level given the solids loading of 0.1 vol %. More detailed observations of particle resuspension and settling were made during and after the third pouring experiment. The accumulated layer of particles at the bottom of the riser appeared to be unaffected after a pouring cycle of approximately 15 minutes at the prototypic flow rate. The accumulated layer of particles along the bottom of the throat was somewhat reduced after the same pouring cycle. Review of the time-lapse recording showed that some of the settling particles flow from the riser into the throat. This may result in a thicker than expected settled layer in the throat.

  4. Accumulation of uranium by immobilized persimmon tannin

    SciTech Connect

    Sakaguchi, Takashi; Nakajima, Akira )

    1994-01-01

    We have discovered that the extracted juice of unripe astringent persimmon fruit, designated as kakishibu or shibuol, has an extremely high affinity for uranium. To develop efficient adsorbents for uranium, we tried to immobilize kakishibu (persimmon tannin) with various aldehydes and mineral acids. Persimmon tannin immobilized with glutaraldehyde can accumulate 1.71 g (14 mEq U) of uranium per gram of the adsorbent. The uranium accumulating capacity of this adsorbent is several times greater than that of commercially available chelating resins (2-3 mEq/g). Immobilized persimmon tannin has the most favorable features for uranium recovery; high selective adsorption ability, rapid adsorption rate, and applicability in both column and batch systems. The uranium retained on immobilized persimmon tannin can be quantitatively and easily eluted with a very dilute acid, and the adsorbent can thus be easily recycled in the adsorption-desorption process. Immobilized persimmon tannin also has a high affinity for thorium. 23 refs., 13 figs., 7 tabs.

  5. Normative evidence accumulation in unpredictable environments

    PubMed Central

    Glaze, Christopher M; Kable, Joseph W; Gold, Joshua I

    2015-01-01

    In our dynamic world, decisions about noisy stimuli can require temporal accumulation of evidence to identify steady signals, differentiation to detect unpredictable changes in those signals, or both. Normative models can account for learning in these environments but have not yet been applied to faster decision processes. We present a novel, normative formulation of adaptive learning models that forms decisions by acting as a leaky accumulator with non-absorbing bounds. These dynamics, derived for both discrete and continuous cases, depend on the expected rate of change of the statistics of the evidence and balance signal identification and change detection. We found that, for two different tasks, human subjects learned these expectations, albeit imperfectly, then used them to make decisions in accordance with the normative model. The results represent a unified, empirically supported account of decision-making in unpredictable environments that provides new insights into the expectation-driven dynamics of the underlying neural signals. DOI: http://dx.doi.org/10.7554/eLife.08825.001 PMID:26322383

  6. Mass balance-based regression modeling of PAHs accumulation in urban soils, role of urban development.

    PubMed

    Peng, Chi; Wang, Meie; Chen, Weiping; Chang, Andrew C

    2015-02-01

    We investigated the polycyclic aromatic hydrocarbons (PAHs) contents in 68 soils samples collected at housing developments that represent different length of development periods across Beijing. Based on the data, we derived a mass balanced mathematical model to simulate the dynamics of PAH accumulations in urban soils as affected by the urban developments. The key parameters were estimated by fitting the modified mass balance model to the data of PAH concentrations vs. building age of the sampling green area. The total PAH concentrations would increase from the baseline of 267 ng g(-1) to 3631 ng g(-1) during the period of 1978-2048. It showed that the dynamic changes in the rates of accumulations of light and heavy PAH species were related to the shifting of sources of fuels, combustion efficiencies, and amounts of energy consumed during the course of development.

  7. phoU Inactivation in Pseudomonas aeruginosa Enhances Accumulation of ppGpp and Polyphosphate

    PubMed Central

    de Almeida, Luiz Gustavo; Ortiz, Julia Helena; Schneider, René P.

    2015-01-01

    Inorganic polyphosphate (polyP) is a linear polymer composed of several molecules of orthophosphate (Pi) linked by energy-rich phosphoanhydride bonds. In Pseudomonas aeruginosa, Pi is taken up by the ABC transporter Pst, encoded by an operon consisting of five genes. The first four genes encode proteins involved in the transport of Pi and the last gene of the operon, phoU, codes for a protein which exact function is unknown. We show here that the inactivation of phoU in P. aeruginosa enhanced Pi removal from the medium and polyP accumulation. The phoU mutant also accumulated high levels of the alarmone guanosine tetraphosphate (ppGpp), which in turn increased the buildup of polyP. In addition, phoU inactivation had several pleiotropic effects, such as reduced growth rate and yield and increased sensitivity to antibiotics and stresses. However, biofilm formation was not affected by the phoU mutation. PMID:25710363

  8. [Alcohol fermentation: effect of temperature on ethanol accumulation within yeast cells (author's transl)].

    PubMed

    Navarro, J M; Durand, G

    1978-01-01

    During fermentation, yeast growth is rapidly stopped when the concentration of alcohol in the medium increases but fermentive activity is not entirely inhibited until high alcohol concentrations are reached. The rate of alcohol accumulation within the cells and certain kinetic parameters were simultaneously determined in such fermentative processes using Saccharomyces carlsbergensis cells. The growth inhibitory effect of alcohol was related to its retention inside within the cells; i.e. yeast multiplication is stopped when intracellular alcohol concentration reaches a maximum value. Moreover, the higher the temperature, the deeper the inhibitory effect of ethanol and the higher the maximal intracellular alcohol concentration. Activation energy determinations showed that ethanol accumulation within the cells was a consequence of the resistance to its diffusion through the cell wall from within to outside the cell.

  9. Accumulation of the polychlorinated biphenyl Aroclor 1242 from contaminated detritus and water by the saltmarsh detritivore, Uca pugnax

    SciTech Connect

    Marinucci, A.C.; Bartha, R.

    1982-09-01

    The uptake of Aroclor 1242 from ingested detritus and in contaminated water is compared in the fiddler crab. Analysis was by gas chromatography. Results show that uptake from water was about one-half that of the uptake from PCB-laden (85 ng/g dry wt) detritus after 34 days. Respiration and egestion rates may not be the only factors controlling accumulation and concentration. The concentration of PCBs in detritus may have a major effect. (JMT)

  10. Response of salt-marsh carbon accumulation to climate change.

    PubMed

    Kirwan, Matthew L; Mudd, Simon M

    2012-09-27

    About half of annual marine carbon burial takes place in shallow water ecosystems where geomorphic and ecological stability is driven by interactions between the flow of water, vegetation growth and sediment transport. Although the sensitivity of terrestrial and deep marine carbon pools to climate change has been studied for decades, there is little understanding of how coastal carbon accumulation rates will change and potentially feed back on climate. Here we develop a numerical model of salt marsh evolution, informed by recent measurements of productivity and decomposition, and demonstrate that competition between mineral sediment deposition and organic-matter accumulation determines the net impact of climate change on carbon accumulation in intertidal wetlands. We find that the direct impact of warming on soil carbon accumulation rates is more subtle than the impact of warming-driven sea level rise, although the impact of warming increases with increasing rates of sea level rise. Our simulations suggest that the net impact of climate change will be to increase carbon burial rates in the first half of the twenty-first century, but that carbon-climate feedbacks are likely to diminish over time.

  11. Coastal landforms and accumulation of mangrove peat increase carbon sequestration and storage

    PubMed Central

    Garcillán, Pedro P.

    2016-01-01

    Given their relatively small area, mangroves and their organic sediments are of disproportionate importance to global carbon sequestration and carbon storage. Peat deposition and preservation allows some mangroves to accrete vertically and keep pace with sea-level rise by growing on their own root remains. In this study we show that mangroves in desert inlets in the coasts of the Baja California have been accumulating root peat for nearly 2,000 y and harbor a belowground carbon content of 900–34,00 Mg C/ha, with an average value of 1,130 (± 128) Mg C/ha, and a belowground carbon accumulation similar to that found under some of the tallest tropical mangroves in the Mexican Pacific coast. The depth–age curve for the mangrove sediments of Baja California indicates that sea level in the peninsula has been rising at a mean rate of 0.70 mm/y (± 0.07) during the last 17 centuries, a value similar to the rates of sea-level rise estimated for the Caribbean during a comparable period. By accreting on their own accumulated peat, these desert mangroves store large amounts of carbon in their sediments. We estimate that mangroves and halophyte scrubs in Mexico’s arid northwest, with less than 1% of the terrestrial area, store in their belowground sediments around 28% of the total belowground carbon pool of the whole region. PMID:27035950

  12. Coastal landforms and accumulation of mangrove peat increase carbon sequestration and storage.

    PubMed

    Ezcurra, Paula; Ezcurra, Exequiel; Garcillán, Pedro P; Costa, Matthew T; Aburto-Oropeza, Octavio

    2016-04-19

    Given their relatively small area, mangroves and their organic sediments are of disproportionate importance to global carbon sequestration and carbon storage. Peat deposition and preservation allows some mangroves to accrete vertically and keep pace with sea-level rise by growing on their own root remains. In this study we show that mangroves in desert inlets in the coasts of the Baja California have been accumulating root peat for nearly 2,000 y and harbor a belowground carbon content of 900-34,00 Mg C/ha, with an average value of 1,130 (± 128) Mg C/ha, and a belowground carbon accumulation similar to that found under some of the tallest tropical mangroves in the Mexican Pacific coast. The depth-age curve for the mangrove sediments of Baja California indicates that sea level in the peninsula has been rising at a mean rate of 0.70 mm/y (± 0.07) during the last 17 centuries, a value similar to the rates of sea-level rise estimated for the Caribbean during a comparable period. By accreting on their own accumulated peat, these desert mangroves store large amounts of carbon in their sediments. We estimate that mangroves and halophyte scrubs in Mexico's arid northwest, with less than 1% of the terrestrial area, store in their belowground sediments around 28% of the total belowground carbon pool of the whole region.

  13. Recent organic carbon accumulation (~100 years) along the Cabo Frio, Brazil upwelling region

    NASA Astrophysics Data System (ADS)

    Sanders, Christian J.; Caldeira, Pedro P.; Smoak, Joseph M.; Ketterer, Michael E.; Belem, Andre; Mendoza, Ursula M. N.; Cordeiro, Lívia G. M. S.; Silva-Filho, Emmanoel V.; Patchineelam, Sambasiva R.; Albuquerque, Ana Luiza S.

    2014-03-01

    Six sediment cores were obtained from the Cabo Frio shelf region of coastal Brazil to quantify the accumulation of organic carbon in a highly productive upwelling region. The sampled locations, 10-60 km offshore at ~100 m water depth, were investigated for excess 210Pb (210Pbex) as well as 239+240Pu fallout activities to determine sedimentary dynamics. The 210Pbex and 239+240Pu dating models show that the sediment accumulation rates varied substantially throughout this complex hydrodynamic system (0.8-5.5 mm yr-1). Excess 210Pb and 239+240Pu fluxes indicate lateral transport, with varying intensity along the continental shelf. The stations with the greatest 210Pbex and 239+240Pu sediment inventories are also the sites with the highest carbon accumulation rates (CAR). The total organic carbon (TOC) and total nitrogen (TN) contents, along with the δ13C results, indicate that the organic matter deposited in this region is mainly of marine origin. The results of this work suggest that lateral transport, with varying intensity along the shelf, contribute to the large quantities of marine plankton buried at specific depositional settings in the Cabo Frio upwelling region (~1-8 mol of OC cm-2 yr-1).

  14. Constraints on accumulated strain near the ETS zone along Cascadia

    NASA Astrophysics Data System (ADS)

    Krogstad, Randy D.; Schmidt, David A.; Weldon, Ray J.; Burgette, Reed J.

    2016-04-01

    Current national seismic hazard models for Cascadia use the zone of episodic tremor and slip (ETS) to denote the lower boundary of the seismogenic zone. Recent numerical models have suggested that an appreciable amount of long-term strain may accumulate at the depth of ETS and questions this assumption. We use uplift rates from leveling campaigns spanning approximately 50-70 yrs in Washington and Oregon to investigate the amount of potential long-term locking near the ETS zone. We evaluate the potential for deeper locking in Cascadia by exploring a range of locking parameters along the subduction zone, including the ETS zone. Of the four east-west leveling profiles studied, three show a reduction in the misfit when secondary locking near the ETS zone is included; however the reduction in misfit values is only statistically significant for one profile. This would suggest that models including a small amount of secondary locking are broadly indistinguishable from models without any secondary locking. If secondary locking is considered, the leveling data allow for locking up to ∼20% of the plate rate near the updip edge of the ETS zone. These results are consistent with, but less resolved, by GPS observations.

  15. Accumulation and diagenesis of chlorinated hydrocarbons in lacustrine sediments

    USGS Publications Warehouse

    Elsenreich, S.J.; Capel, P.D.; Robbins, J.A.; Bourbonniere, R.

    1989-01-01

    Two sediment cores were taken from the Rochester Basin of eastern Lake Ontario and analyzed for the radionuclides 210Pb and 137Cs and several high molecular weight chlorinated hydrocarbons (CHs). The two sites are geographically proximate but differ in sedimentation rate, permitting sedimentation-dependent processes to be factored out. The 210Pb chronology showed a mixed depth of 3-5 cm and an intrinsic time resolution of 11-14 years. Vertically integrated numbers of deposit-feeding oligochaete worms and burrowing organisms are insufficient to homogenize the sediment on the time scale of CH inputs, which are non steady state. U.S. production and sales of polychlorinated biphenyls (PCBs), DDT, Mirex, and hexachlorobenzene (HCB), as determinants of the shape of the input function, adequately predict the overall shape and, in many cases, details in the sedimentary profile. Sediment focusing factors (FF) inferred from 137Cs and 210Pb inventories averaged 1.17 and 1.74 for cores E-30 and G-32, respectively. This permitted CH accumulation rates to be corrected for focusing. Apparent molecular diffusion coefficients modeled for many of the CHs were about (1-3) ?? 10-9 cm2/s.

  16. Strain accumulation at Yucca Mountain, Nevada, 1983-1998

    NASA Astrophysics Data System (ADS)

    Savage, J. C.; Svarc, J. L.; Prescott, W. H.

    1999-08-01

    A 14-station, 50-km aperture geodetic array centered on the proposed radioactive waste disposal site at Yucca Mountain, Nevada, was surveyed in 1983, 1984, 1993, and 1998 to determine the rate of strain accumulation there. The coseismic effects of the 1992 (MS=5.4) Little Skull Mountain earthquake, which occurred within the array, were calculated from a dislocation model and removed from the data. The measured principal strain accumulation rates determined over the 1983-1998 interval are ɛ1 = 2±12 nanostrain/yr N87°W±12° and ɛ2 = -22±12 nanostrain/yr N03°E±12° (extension reckoned positive and quoted uncertainties are standard deviations). The N65°W extension rate is -2±12 nanostrain/yr, significantly less than the 1991-1997 N65°W rate of 50±9 nanostrain/yr reported by Wernicke et al. [1998]. The implied maximum right-lateral engineering-shear, strain accumulation rate is γ=ɛ1-ɛ2 = 23±10 nanostrain/yr, a marginally significant rate. Almost half (ɛ1 = 6 nanostrain/yr N90°W, ɛ2 = -6 nanostrain/yr N00°E, and γ = 12 nanostrain/yr ) of the measured strain rate can be attributed to strain accumulation on the Death Valley-Furnace Creek (50 km distant) and Hunter Mountain-Panamint Valley (90 km distant) faults. The residual strain rate after the removal of those fault contributions is not significant at the 95% confidence level.

  17. Deleterious mutation accumulation in asexual Timema stick insects.

    PubMed

    Henry, Lee; Schwander, Tanja; Crespi, Bernard J

    2012-01-01

    Sexual reproduction is extremely widespread in spite of its presumed costs relative to asexual reproduction, indicating that it must provide significant advantages. One postulated benefit of sex and recombination is that they facilitate the purging of mildly deleterious mutations, which would accumulate in asexual lineages and contribute to their short evolutionary life span. To test this prediction, we estimated the accumulation rate of coding (nonsynonymous) mutations, which are expected to be deleterious, in parts of one mitochondrial (COI) and two nuclear (Actin and Hsp70) genes in six independently derived asexual lineages and related sexual species of Timema stick insects. We found signatures of increased coding mutation accumulation in all six asexual Timema and for each of the three analyzed genes, with 3.6- to 13.4-fold higher rates in the asexuals as compared with the sexuals. In addition, because coding mutations in the asexuals often resulted in considerable hydrophobicity changes at the concerned amino acid positions, coding mutations in the asexuals are likely associated with more strongly deleterious effects than in the sexuals. Our results demonstrate that deleterious mutation accumulation can differentially affect sexual and asexual lineages and support the idea that deleterious mutation accumulation plays an important role in limiting the long-term persistence of all-female lineages.

  18. Strain accumulation and rotation in the Eastern California Shear Zone

    USGS Publications Warehouse

    Savage, J.C.; Gan, Weijun; Svarc, J.L.

    2001-01-01

    Although the Eastern California Shear Zone (ECSZ) (strike ???N25??W) does not quite coincide with a small circle drawn about the Pacific-North America pole of rotation, trilateration and GPS measurements demonstrate that the motion within the zone corresponds to right-lateral simple shear across a vertical plane (strike N33??W??5??) roughly parallel to the tangent to that local small circle (strike ???N40??W). If the simple shear is released by slip on faults subparallel to the shear zone, the accumulated rotation is also released, leaving no secular rotation. South of the Garlock fault the principal faults (e.g., Calico-Blackwater fault) strike ???N40??W, close enough to the strike of the vertical plane across which maximum right-lateral shear accumulates to almost wholly accommodate that accumulation of both strain and rotation by right-lateral slip. North of the Garlock fault dip slip as well as strike slip on the principal faults (strike ???N20??W) is required to accommodate the simple shear accumulation. In both cases the accumulated rotation is released with the shear strain. The Garlock fault, which transects the ECSZ, is not offset by north-northwest striking faults nor, despite geological evidence for long-term left-lateral slip, does it appear at the present time to be accumulating left-lateral simple shear strain across the fault due to slip at depth. Rather the motion is explained by right-lateral simple shear across the orthogonal ECSZ. Left-lateral slip on the Garlock fault will release the shear strain accumulating there but would augment the accumulating rotation, resulting in a secular clockwise rotation rate ???80 nrad yr-1 (4.6?? Myr-1).