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Sample records for accurate topographic maps

  1. Topographic mapping

    USGS Publications Warehouse

    ,

    2008-01-01

    The U.S. Geological Survey (USGS) produced its first topographic map in 1879, the same year it was established. Today, more than 100 years and millions of map copies later, topographic mapping is still a central activity for the USGS. The topographic map remains an indispensable tool for government, science, industry, and leisure. Much has changed since early topographers traveled the unsettled West and carefully plotted the first USGS maps by hand. Advances in survey techniques, instrumentation, and design and printing technologies, as well as the use of aerial photography and satellite data, have dramatically improved mapping coverage, accuracy, and efficiency. Yet cartography, the art and science of mapping, may never before have undergone change more profound than today.

  2. Making Accurate Topographic Maps of the Schoolyard Using Ideas and Techniques Learned and Adapted from Multi-beam Sonar Mapping of the Arctic Ocean

    NASA Astrophysics Data System (ADS)

    Fuerst, S. I.; Roberts, J. D.

    2010-12-01

    Having participated in a University of Rhode Island Project Armada expedition to join the University of New Hampshire Center for Coastal and Oceanographic Studies in making multi-beam sonar contour maps of the Arctic Ocean floor, I was able to bring the principles learned from this trip to my earth science high school students and create a project in our "mapping the earth" unit. Students learn basic surveying techniques and create authentic, accurately detailed topographic maps of the schoolyard. Models of their maps are then constructed of either Styrofoam or wood which enables them to make the transition from a 2-dimensional map to a 3-dimensional representation. Even though our maps are created using sticks, line levels, compasses and GPS, the scientific concepts of using location and elevation data to draw contour lines are identical to those used in underwater mapping. Once the students understand the science in mapping and creating contour maps to scale on graph paper by hand, they are able to easily relate this knowledge to what I was doing onboard ship using multi-beam sonar and computer mapping programs. We would like to share with you the lab and techniques that we have developed to make this activity possible with minimal materials and simple technology. As a background extension, it is also possible to replicate sonar measurements using an aquarium, food coloring, and a surface grid to map the topography of a teacher created landscape on the aquarium bottom. Earth Science students using simple tools to accurately map the topography of the school grounds

  3. Mars synthetic topographic mapping

    USGS Publications Warehouse

    Wu, S.S.C.

    1978-01-01

    Topographic contour maps of Mars are compiled by the synthesis of data acquired from various scientific experiments of the Mariner 9 mission, including S-band radio-occulation, the ultraviolet spectrometer (UVS), the infrared radiometer (IRR), the infrared interferometer spectrometer (IRIS) and television imagery, as well as Earth-based radar information collected at Goldstone, Haystack, and Arecibo Observatories. The entire planet is mapped at scales of 1:25,000,000 and 1:25,000,000 using Mercator, Lambert, and polar stereographic map projections. For the computation of map projections, a biaxial spheroid figure is adopted. The semimajor and semiminor axes are 3393.4 and 3375.7 km, respectively, with a polar flattening of 0.0052. For the computation of elevations, a topographic datum is defined by a gravity field described in terms of spherical harmonics of fourth order and fourth degree combined with a 6.1-mbar occulation pressure surface. This areoid can be approximated by a triaxial ellipsoid with semimajor axes of A = 3394.6 km and B = 3393.3 km and a semiminor axis of C = 3376.3 km. The semimajor axis A intersects the Martian surface at longitude 105??W. The dynamic flattening of Mars is 0.00525. The contour intercal of the maps is 1 km. For some prominent features where overlapping pictures from Mariner 9 are available, local contour maps at relatively larger scales were also compiled by photogrammetric methods on stereo plotters. ?? 1978.

  4. Topographic mapping: A challenging future

    USGS Publications Warehouse

    ,

    1964-01-01

    The United States Geological Survey was established by Congress in 1879 to make a systematic study of the geology and natural resources of the United States. To provide the essential base maps for these studies, the Survey immediately began a program of topographic mapping. In 1882 a general plan was adopted for a standard series of general-purpose topographic maps covering the entire country. Today ... the primary job of the Topographic Division of the Geological Survey is to carry out topographic surveys, and to publish the results as quadrangles in the National Topographic Map Series.

  5. Topographic Maps and Coal Mining.

    ERIC Educational Resources Information Center

    Raitz, Karl B.

    1984-01-01

    Geography teachers can illustrate the patterns associated with mineral fuel production, especially coal, by using United States Geological Survey topographic maps, which are illustrated by symbols that indicate mine-related features, such as shafts and tailings. Map reading exercises are presented; an interpretative map key that can facilitate…

  6. Topographic Maps from a Kiosk

    USGS Publications Warehouse

    ,

    2001-01-01

    In April 2000, the U.S. Geological Survey (USGS) and National Geographic (NG) TOPO entered into a cooperative research and development agreement (CRADA) to explore a new technology that would allow a person to walk into a map retail store and print a personalized topographic map, vending machine style, from a self-service kiosk. Work began to develop systems that offer seamless, digitally stored USGS topographic maps using map-on-demand software from NG TOPO. The vending machine approach ensures that maps are never out of stock, allows customers to define their own map boundaries, and gives customers choices regarding shaded relief and the grids to be printed on the maps to get the exact maps they need.

  7. Topographic Map and Compass Use. Student Manual.

    ERIC Educational Resources Information Center

    Taylor, Michael

    This student manual is designed to introduce students to topographic maps and compass use. The first of five units included in the manual is an introduction to topographic maps. Among the topics discussed in this unit are uses, sources, and care and maintenance of topographic maps. Unit 2 discusses topographic map symbols and colors and provides a…

  8. Topographic mapping of the Moon

    USGS Publications Warehouse

    Wu, S.S.C.

    1985-01-01

    Contour maps of the Moon have been compiled by photogrammetric methods that use stereoscopic combinations of all available metric photographs from the Apollo 15, 16, and 17 missions. The maps utilize the same format as the existing NASA shaded-relief Lunar Planning Charts (LOC-1, -2, -3, and -4), which have a scale of 1:2 750 000. The map contour interval is 500m. A control net derived from Apollo photographs by Doyle and others was used for the compilation. Contour lines and elevations are referred to the new topographic datum of the Moon, which is defined in terms of spherical harmonics from the lunar gravity field. Compilation of all four LOC charts was completed on analytical plotters from 566 stereo models of Apollo metric photographs that cover approximately 20% of the Moon. This is the first step toward compiling a global topographic map of the Moon at a scale of 1:5 000 000. ?? 1985 D. Reidel Publishing Company.

  9. The National Map: Topographic Maps for the 21st Century

    USGS Publications Warehouse

    ,

    2002-01-01

    The U.S. Geological Survey (USGS) is committed to meeting the Nation's needs for current base geographic data and maps. Our vision is that, by working with partners, we will provide the Nation with access to current, accurate, and nationally consistent digital data and topographic maps derived from those data. This synthesis of information, products, and capabilities, The National Map, will be a seamless, continuously maintained set of geographic base information that will serve as a foundation for integrating, sharing, and using other data easily and consistently.

  10. The National Map: Topographic Maps for the 21st Century

    USGS Publications Warehouse

    ,

    2006-01-01

    The U.S. Geological Survey (USGS) is committed to meeting the Nation's needs for current base geographic data and maps. Our vision is that, by working with partners, we will provide the Nation with access to current, accurate, and nationally consistent digital data and topographic maps derived from those data. This synthesis of information, products, and capabilities, The National Map, will be a seamless, continuously maintained set of geographic base information that will serve as a foundation for integrating, sharing, and using other data easily and consistently.

  11. A Method for Teaching Topographic Map Interpretation

    ERIC Educational Resources Information Center

    Schuit, Walter

    2011-01-01

    Students learn how to read and interpret topographic maps by using a set of simplified map exercise cards. Students learn in the field as opposed to a traditional classroom. Map symbols, distance, direction, form, and relief are among the map interpretation topics taught with this method. The multiple-choice format of the exercise also allows for…

  12. A Watered-Down Topographic Map. Submarine Ring of Fire--Grades 6-8. Topographic and Bathymetric Maps.

    ERIC Educational Resources Information Center

    National Oceanic and Atmospheric Administration (DOC), Rockville, MD.

    This activity is designed to teach about topographic maps and bathymetric charts. Students are expected to create a topographic map from a model landform, interpret a simple topographic map, and explain the difference between topographic and bathymetric maps. The activity provides learning objectives, a list of needed materials, key vocabulary…

  13. US Topo: Topographic Maps for the Nation

    USGS Publications Warehouse

    Hytes, Patricia L.

    2009-01-01

    US Topo is the next generation of topographic maps from the U.S. Geological Survey (USGS). Arranged in the familiar 7.5-minute quadrangle format, digital US Topo maps are designed to look and feel (and perform) like the traditional paper topographic maps for which the USGS is so well known. In contrast to paper-based maps, US Topo maps provide modern technical advantages that support faster, wider public distribution and enable basic, on-screen geographic analysis for all users. US Topo maps are available free on the Web. Each map quadrangle is constructed in GeoPDF? format from key layers of geographic data (orthoimagery, roads, geographic names, topographic contours, and hydrographic features) found in The National Map. US Topo quadrangles can be printed from personal computers or plotters as complete, full-sized, maps or in customized sections, in a user-desired specific format. Paper copies of the maps can also be purchased from the USGS Store. Download links and a users guide are featured on the US Topo Web site. US Topo users can turn geographic data layers on and off as needed; they can zoom in and out to highlight specific features or see a broader area. File size for each digital 7.5-minute quadrangle, about 15-20 megabytes, is suitable for most users. Associated electronic tools for geographic analysis are available free for download.

  14. Field surveying and topographic mapping in Alaska: 1947-83

    USGS Publications Warehouse

    Foley, Robert C.

    1987-01-01

    This circular retraces surveying and topographic mapping by the Geological Survey in Alaska from 1947 to 1983 and describes camp life and some of the unusual happenings involved in working in virtually uninhabited country, adverse weather, and difficult terrain. A year-by-year recap of activities documents the transition from early small-scale mapping efforts to more accurate and detailed 1:63,360-scale mapping for Alaska except the Aleutian Islands and isolated islands in the Bering Sea. Recent 1:25,000-scale metric mapping and the preparation of orthophotographs and special mapping efforts for other Government agencies also are recounted.

  15. The TOPSAR interferometric radar topographic mapping instrument

    NASA Astrophysics Data System (ADS)

    Zebker, Howard A.

    1991-08-01

    We have augmented the NASA DC-8 Airborne Synthetic Aperture Radar (AIRSAR) instrument with a pair of C-band antennas displaced across the track to form an interferometer sensitive to topographic variations of the Earth's surface. The antennas were developed by Alenia Spazio under the sponsorship of the Italian Space Agency (ASI), and the AIRSAR instrument and modifications to it supporting TOPSAR were sponsored by NASA. A new data processor was developed at JPL for producing the topographic maps. As of May 1991, one engineering flight line over San Francisco, CA was reduced to a cartographically rectified topographic map. Analysis of the results indicates that statistical errors are in the range of 2 to 4 m, while systematic effects due to aircraft motion are in the range of 6 to 12 m. Future aircraft motion compensation algorithms should reduce the systematic variations to near zero, while the statistical errors could likely be reduced to 2 m or less with some processor improvements.

  16. US Topo: topographic maps for the nation

    USGS Publications Warehouse

    Carswell, William J.

    2013-01-01

    US Topo is the next generation of topographic maps from the U.S. Geological Survey (USGS). Arranged in the familiar 7.5-minute quadrangle format, digital US Topo maps are designed to look and feel (and perform) like the traditional paper topographic maps for which the USGS is so well known. In contrast to paper-based maps, US Topo maps provide modern technical advantages that support faster, wider public distribution and enable basic, on-screen geographic analysis for all users. The US Topo quadrangle map has been redesigned so that map elements are visually distinguishable with the imagery turned on and off, while keeping the file size as small as possible. The US Topo map redesign includes improvements to various display factors, including symbol definitions (color, line thickness, line symbology, area fills), layer order, and annotation fonts. New features for 2013 include the following: a raster shaded relief layer, military boundaries, cemeteries and post offices, and a US Topo cartographic symbols legend as an attachment. US Topo quadrangle maps are available free on the Web. Each map quadrangle is constructed in GeoPDF® format using key layers of geographic data (orthoimagery, roads, geographic names, topographic contours, and hydrographic features) from The National Map databases. US Topo quadrangle maps can be printed from personal computers or plotters as complete, full-sized, maps or in customized sections, in a user-desired specific format. Paper copies of the maps can also be purchased from the USGS Store. Download links and a users guide are featured on the US Topo Web site. US Topo users can turn geographic data layers on and off as needed; they can zoom in and out to highlight specific features or see a broader area. File size for each digital 7.5-minute quadrangle, about 30 megabytes. Associated electronic tools for geographic analysis are available free for download. The US Topo provides the Nation with a topographic product that users can

  17. 183. Photocopy of map (Twin Falls Canal Company). TOPOGRAPHICAL MAP ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    183. Photocopy of map (Twin Falls Canal Company). TOPOGRAPHICAL MAP OF MILNER DAM SITE, TWIN FALLS COUNTY, MILNER, IDAHO; MAP, LEFT SIDE ONLY. CROSS REFERENCE: ID-15-192. - Milner Dam & Main Canal: Twin Falls Canal Company, On Snake River, 11 miles West of city of Burley, Idaho, Twin Falls, Twin Falls County, ID

  18. Geometric accuracy of topographical objects at Polish topographic maps

    NASA Astrophysics Data System (ADS)

    Ławniczak, Radzym; Kubiak, Jarosław

    2016-06-01

    The objective of research concerned verifying the accuracy of the location and shape of selected lakes presented on topographical maps from various periods, drawn up on different scales. The area of research covered lakes situated in North-Western Poland on the Międzychód-Sieraków Lakeland. An analysis was performed of vector maps available in both analogue and digital format. The scales of these studies range from 1:50 000 to 1:10 000. The source materials were current for the years 1907 through 2013. The shape and location of lakes have been verified directly by means of field measurements performed using the GPS technology with an accuracy class of RTK. An analysis was performed of the location and shape of five lakes. The analysed water regions were vectorised, and their vector images were used to determine quantitative features: the area and length of the shoreline. Information concerning the analysed lakes obtained from the maps was verified on the basis of direct field measurements performed using a GPS RTK receiver. Use was made of georeferential corrections provided by the NAVGEO service or a virtual reference station generated by the ASG EUPOS system. A compilation of cartographic and field data formed the basis for a comparison of the actual area and the length of the shoreline of the studied lakes. Cartographic analyses made it possible to single out the most reliable cartographic sources, which could be used for the purposes of hydrographical analyses. The course of shorelines shows the attached map.

  19. Kernel-Based Equiprobabilistic Topographic Map Formation.

    PubMed

    Van Hulle MM

    1998-09-15

    We introduce a new unsupervised competitive learning rule, the kernel-based maximum entropy learning rule (kMER), which performs equiprobabilistic topographic map formation in regular, fixed-topology lattices, for use with nonparametric density estimation as well as nonparametric regression analysis. The receptive fields of the formal neurons are overlapping radially symmetric kernels, compatible with radial basis functions (RBFs); but unlike other learning schemes, the radii of these kernels do not have to be chosen in an ad hoc manner: the radii are adapted to the local input density, together with the weight vectors that define the kernel centers, so as to produce maps of which the neurons have an equal probability to be active (equiprobabilistic maps). Both an "online" and a "batch" version of the learning rule are introduced, which are applied to nonparametric density estimation and regression, respectively. The application envisaged is blind source separation (BSS) from nonlinear, noisy mixtures.

  20. Digital workstation for Venus topographic mapping

    NASA Astrophysics Data System (ADS)

    Poehler, Paul; Haag, Nils N.; Maupin, Jerry A.; Howington-Kraus, Annie E.; Wu, Sherman S.

    1993-10-01

    A digital workstation was developed and is currently at the U.S. Geological Survey (USGS) in Flagstaff, Arizona to be used for Venus topographic mapping. The system is based on a mapping and geocoding image correlation (GIS MAGIC) system developed by Science Applications International Corporation (SAIC) for the creation of precisely geocoded imagery data bases for both optical and synthetic aperture radar (SAR) imagery. A multitude of data from various sources has been processed, including conventional aerial photographs, airborne and orbital SAR, and Spot. This paper covers the GIS MAGIC development history, hardware/software features and capabilities. Also covered are the types of modifications required to accommodate Venus radar data and results which can be achieved using the GIS MAGIC System.

  1. An Interdisciplinary Theme: Topographic Maps and Plate Tectonics

    ERIC Educational Resources Information Center

    Concannon, James P.; Aulgur, Linda

    2011-01-01

    This is an interdisciplinary lesson designed for middle school students studying landforms and geological processes. Students create a two-dimensional topographic map from a three-dimensional landform that they create using clay. Students then use other groups' topographic maps to re-create landforms. Following this, students explore some basic…

  2. Mosaic of Digital Raster Soviet Topographic Maps of Afghanistan

    USGS Publications Warehouse

    Chirico, Peter G.; Warner, Michael B.

    2005-01-01

    EXPLANATION The data contained in this publication include scanned, geographically referenced digital raster graphics (DRGs) of Soviet 1:200,000 - scale topographic map quadrangles. The original Afghanistan topographic map series at 1:200,000 scale, for the entire country, was published by the Soviet military between 1985 and 1991(MTDGS, 85-91). Hard copies of these original paper maps were scanned using a large format scanner, reprojected into Geographic Coordinate System (GCS) coordinates, and then clipped to remove the map collars to create a seamless, topographic map base for the entire country. An index of all available topographic map sheets is displayed here: Index_Geo_DD.pdf. This publication also includes the originial topographic map quadrangles projected in Universal Transverse Mercator (UTM) projection. The country of Afghanistan spans three UTM Zones: Zone 41, Zone 42, and Zone 43. Maps are stored as GeoTIFFs in their respective UTM zone projection. Indexes of all available topographic map sheets in their respective UTM zone are displayed here: Index_UTM_Z41.pdf, Index_UTM_Z42.pdf, Index_UTM_Z43.pdf. An Adobe Acrobat PDF file of the U.S. Department of the Army's Technical Manual 30-548, is available (U.S. Army, 1958). This document has been translated into English for assistance in reading Soviet topographic map symbols.

  3. A topographic feature taxonomy for a U.S. national topographic mapping ontology

    USGS Publications Warehouse

    Varanka, Dalia E.

    2013-01-01

    Using legacy feature lists from the U.S. National Topographic Mapping Program of the twentieth century, a taxonomy of features is presented for purposes of developing a national topographic feature ontology for geographic mapping and analysis. After reviewing published taxonomic classifications, six basic classes are suggested; terrain, surface water, ecological regimes, built-up areas, divisions, and events. Aspects of ontology development are suggested as the taxonomy is described.

  4. Multibeam Laser Altimeter for Planetary Topographic Mapping

    NASA Technical Reports Server (NTRS)

    Garvin, J. B.; Bufton, J. L.; Harding, D. J.

    1993-01-01

    Laser altimetry provides an active, high-resolution, high-accuracy method for measurement of planetary and asteroid surface topography. The basis of the measurement is the timing of the roundtrip propagation of short-duration pulses of laser radiation between a spacecraft and the surface. Vertical, or elevation, resolution of the altimetry measurement is determined primarily by laser pulse width, surface-induced spreading in time of the reflected pulse, and the timing precision of the altimeter electronics. With conventional gain-switched pulses from solid-state lasers and nanosecond resolution timing electronics, submeter vertical range resolution is possible anywhere from orbital altitudes of approximately 1 km to altitudes of several hundred kilometers. Horizontal resolution is a function of laser beam footprint size at the surface and the spacing between successive laser pulses. Laser divergence angle and altimeter platform height above the surface determine the laser footprint size at the surface, while laser pulse repetition rate, laser transmitter beam configuration, and altimeter platform velocity determine the spacing between successive laser pulses. Multiple laser transmitters in a single laser altimeter instrument that is orbiting above a planetary or asteroid surface could provide across-track as well as along-track coverage that can be used to construct a range image (i.e., topographic map) of the surface. We are developing a pushbroom laser altimeter instrument concept that utilizes a linear array of laser transmitters to provide contiguous across-track and along-track data. The laser technology is based on the emerging monolithic combination of individual, 1-sq cm diode-pumped Nd:YAG laser pulse emitters. Details of the multi-emitter laser transmitter technology, the instrument configuration, and performance calculations for a realistic Discovery-class mission will be presented.

  5. 37. Topographical Map of Land of Atwater Kent Manufacturing Co., ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    37. Topographical Map of Land of Atwater Kent Manufacturing Co., 38th Ward, Philadelphia (before 1928) - Atwater Kent Manufacturing Company, North Plant, 5000 Wissahickon Avenue, Philadelphia, Philadelphia County, PA

  6. Topographic Brain Mapping: A Window on Brain Function?

    ERIC Educational Resources Information Center

    Karniski, Walt M.

    1989-01-01

    The article reviews the method of topographic mapping of the brain's electrical activity. Multiple electroencephalogram (EEG) electrodes and computerized analysis of the EEG signal are used to generate maps of frequency and voltage (evoked potential). This relatively new technique holds promise in the evaluation of children with behavioral and…

  7. Topographic map of Golden Gate Estates, Collier County, Florida

    USGS Publications Warehouse

    Jurado, Antonio

    1981-01-01

    Construction of canals related to land development in the Golden Gate Estates area of Collier County, Fla., has altered the natural drainage pattern of the watershed. The area of approximately 300 square miles was topographically mapped with a contour interval of 0.5 foot to assist in determining the effects of canal construction on the surface-water and ground-water resources in the watershed. The topographic map was prepared at a scale of 1:48,000 using aerial photography and ground-control points. (USGS)

  8. Fine resolution topographic mapping of the Jovian moons: a Ka-band high resolution topographic mapping interferometric synthetic aperture radar

    NASA Technical Reports Server (NTRS)

    Madsen, Soren N.; Carsey, Frank D.; Turtle, Elizabeth P.

    2003-01-01

    The topographic data set obtained by MOLA has provided an unprecedented level of information about Mars' geologic features. The proposed flight of JIMO provides an opportunity to accomplish a similar mapping of and comparable scientific discovery for the Jovian moons through us of an interferometric imaging radar analogous to the Shuttle radar that recently generated a new topographic map of Earth. A Ka-band single pass across-track synthetic aperture radar (SAR) interferometer can provide very high resolution surface elevation maps. The concept would use two antennas mounted at the ends of a deployable boom (similar to the Shuttle Radar Topographic Mapper) extended orthogonal to the direction of flight. Assuming an orbit altitude of approximately 100 km and a ground velocity of approximately 1.5 km/sec, horizontal resolutions at the 10 meter level and vertical resolutions at the sub-meter level are possible.

  9. Fine Resolution Topographic Mapping of the Jovian Moons: A Ka-Band High Resolution Topographic Mapping Interferometric Synthetic Aperture Radar

    NASA Technical Reports Server (NTRS)

    Madsen, S. N.; Carsey, F. D.; Turtle, E. P.

    2003-01-01

    The topographic data set obtained by MOLA has provided an unprecedented level of information about Mars' geologic features. The proposed flight of JIMO provides an opportunity to accomplish a similar mapping of and comparable scientific discovery for the Jovian moons through use of an interferometric imaging radar analogous to the Shuttle radar that recently generated a new topographic map of Earth. A Ka-band single pass across-track synthetic aperture radar (SAR) interferometer can provide very high resolution surface elevation maps. The concept would use two antennas mounted at the ends of a deployable boom (similar to the Shuttle Radar Topographic Mapper) extended orthogonal to the direction of flight. Assuming an orbit altitude of approximately 100km and a ground velocity of approximately 1.5 km/sec, horizontal resolutions at the 10 meter level and vertical resolutions at the sub-meter level are possible.

  10. Uas Topographic Mapping with Velodyne LiDAR Sensor

    NASA Astrophysics Data System (ADS)

    Jozkow, G.; Toth, C.; Grejner-Brzezinska, D.

    2016-06-01

    Unmanned Aerial System (UAS) technology is nowadays willingly used in small area topographic mapping due to low costs and good quality of derived products. Since cameras typically used with UAS have some limitations, e.g. cannot penetrate the vegetation, LiDAR sensors are increasingly getting attention in UAS mapping. Sensor developments reached the point when their costs and size suit the UAS platform, though, LiDAR UAS is still an emerging technology. One issue related to using LiDAR sensors on UAS is the limited performance of the navigation sensors used on UAS platforms. Therefore, various hardware and software solutions are investigated to increase the quality of UAS LiDAR point clouds. This work analyses several aspects of the UAS LiDAR point cloud generation performance based on UAS flights conducted with the Velodyne laser scanner and cameras. The attention was primarily paid to the trajectory reconstruction performance that is essential for accurate point cloud georeferencing. Since the navigation sensors, especially Inertial Measurement Units (IMUs), may not be of sufficient performance, the estimated camera poses could allow to increase the robustness of the estimated trajectory, and subsequently, the accuracy of the point cloud. The accuracy of the final UAS LiDAR point cloud was evaluated on the basis of the generated DSM, including comparison with point clouds obtained from dense image matching. The results showed the need for more investigation on MEMS IMU sensors used for UAS trajectory reconstruction. The accuracy of the UAS LiDAR point cloud, though lower than for point cloud obtained from images, may be still sufficient for certain mapping applications where the optical imagery is not useful.

  11. Model for Improvement of Learning Using Topographic Mapping.

    ERIC Educational Resources Information Center

    Andrews, David B.

    The paper develops a method for learning improvement which incorporates the learner in the development of the learning/instructional strategy. To this end, a rate limiting model using topographical brain mapping as an educational intervention is presented. It is suggested that such intervention programs focus on those factors which are…

  12. SIR-B cartography and stereo topographic mapping

    NASA Technical Reports Server (NTRS)

    Kobrick, M.; Leberi, F.; Raggam, J.; Domik, G.; Welch, R.; Carr, H.; Hammak, J.; Kaupp, V.; Macdonald, H. C.; Waite, W. P.

    1984-01-01

    The SIR-B mapping experiment which will evaluate the utility of SAR images taken singularly, in pairs, and in combination with other data sets for cartographic, topographic, and thematic mapping, and determine the optimum configuration of a SAR system for future mapping mission is outlined. SIR-B is the first orbital imaging radar mission which will incorporate maintenance of geometric image fidelity along with careful calibration and documentation of internal timing and frequency parameters. This along and and the multiple incidence angle images of the same target which are necessary for stereoscopy and topographic mapping, make it the ideal opportunity for cartographic experimentation. It is emphasized that comprises a significant part of the overall experiment objectives.

  13. Color-coded global topographic map of Mars

    NASA Technical Reports Server (NTRS)

    Wu, Sherman S. C.; Howington-Kraus, Annie E.; Ablin, Karyn K.

    1991-01-01

    A Digital Terrain Model (DTM) was derived with both Mercator and Sinusoidal Equal-area projections from the global topographic map of Mars at a scale of 1:15 million and a contour interval of 1 km. Elevations on the map are referred to the Mars topographic datum that is defined by the gravity field at a 6.1-millibar pressure surface with respect to the center of mass of Mars. The DTM has a resolution at the equator of 1/59.226 degrees (exactly 1 km) per pixel. By using the DTM, color-coded global maps of Mars' topography were generated in both the Mercator projection and the Sinusoidal Equal-Area projection. On both maps, colors indicate 1 km increments of height. From the equal-are dataset, the positive and negative elevation distributions are calculated to be 67 and 33 percent, respectively.

  14. 12. Photograph of a topographic map. 'HOLSTON ORDNANCE WORKS, KINGSPORT, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    12. Photograph of a topographic map. 'HOLSTON ORDNANCE WORKS, KINGSPORT, TENNESSEE, VICINITY MAP: ENLARGED KINGSPORT AREA. WAR DEPARTMENT, INDUSTRIAL FACILITIES INVENTORY, PART I, SECTION 3.' From U.S. Army Corps of Engineers. Industrial Facilities Inventory, Holston Ordnance Works, Kingsport, Tennessee. Plant A, Parts I, II, III. (Nashville, TN: Office of the District Engineer, 1944). - Holston Army Ammunition Plant, Producer Gas Plant, Kingsport, Sullivan County, TN

  15. Topographic mapping of single sweep evoked potentials in the brain.

    PubMed

    Liberati, D; DiCorrado, S; Mandelli, S

    1992-09-01

    Single trial analysis of brain-evoked potentials via stochastic parametric identification and filtering is here extended to multichannel recordings, leading to the topographic mapping of the brain activity elicited by a single stimulus, instead of the usual averaged mapping. The temporal dynamics of the subsequent sweeps in the protocol of a neurophysiologic experiment can thus be recovered and quantified also on its spatial characteristic.

  16. UAV Data Processing for Large Scale Topographical Mapping

    NASA Astrophysics Data System (ADS)

    Tampubolon, W.; Reinhardt, W.

    2014-06-01

    Large scale topographical mapping in the third world countries is really a prominent challenge in geospatial industries nowadays. On one side the demand is significantly increasing while on the other hand it is constrained by limited budgets available for mapping projects. Since the advent of Act Nr.4/yr.2011 about Geospatial Information in Indonesia, large scale topographical mapping has been on high priority for supporting the nationwide development e.g. detail spatial planning. Usually large scale topographical mapping relies on conventional aerial survey campaigns in order to provide high resolution 3D geospatial data sources. Widely growing on a leisure hobby, aero models in form of the so-called Unmanned Aerial Vehicle (UAV) bring up alternative semi photogrammetric aerial data acquisition possibilities suitable for relatively small Area of Interest (AOI) i.e. <5,000 hectares. For detail spatial planning purposes in Indonesia this area size can be used as a mapping unit since it usually concentrates on the basis of sub district area (kecamatan) level. In this paper different camera and processing software systems will be further analyzed for identifying the best optimum UAV data acquisition campaign components in combination with the data processing scheme. The selected AOI is covering the cultural heritage of Borobudur Temple as one of the Seven Wonders of the World. A detailed accuracy assessment will be concentrated within the object feature of the temple at the first place. Feature compilation involving planimetric objects (2D) and digital terrain models (3D) will be integrated in order to provide Digital Elevation Models (DEM) as the main interest of the topographic mapping activity. By doing this research, incorporating the optimum amount of GCPs in the UAV photo data processing will increase the accuracy along with its high resolution in 5 cm Ground Sampling Distance (GSD). Finally this result will be used as the benchmark for alternative geospatial

  17. A study of lidar-based sense making and topographic mapping

    NASA Astrophysics Data System (ADS)

    Wu, Qinghua; Lu, Yilong

    2012-11-01

    The paper presents a study of topographic mapping and sense making with LIDAR data and ground color map. The objective is for possible alternative navigation in case the GPS service is not available. To achieve the objective, a few LIDAR data filtering and image processing techniques are applied. From LIDAR data, an accurate digital elevation model is first generated, then a progressive morphological filtering to remove such interference objects as trees for more reliable matching afterwards. For topographic mapping, the processed LIDAR image and a ground map image are segmented based on the Mean-Shift principle, segmenting the image into different color blocks, then extracting the building color blocks and converting into binary image. Lastly based on the least sum of absolute value, we are able to matching a LIDAR image with a real map image. By performing the effective image filtering and matching process, we have successfully achieved accurate topographic matching based on real LIDAR measurement taken in Singapore. This automatic processing is able to indicate exactly where the LIDAR image was taken.

  18. Specification for the U.S. Geological Survey Historical Topographic Map Collection

    USGS Publications Warehouse

    Allord, Gregory J.; Walter, Jennifer L.; Fishburn, Kristin A.; Shea, Gale A.

    2014-01-01

    This document provides the detailed requirements for producing, archiving, and disseminating a comprehensive digital collection of topographic maps for the U.S. Geological Survey (USGS) Historical Topographic Map Collection (HTMC). The HTMC is a digital archive of about 190,000 printed topographic maps published by the USGS from the inception of the topographic mapping program in 1884 until the last paper topographic map using lithographic printing technology was published in 2006. The HTMC provides a comprehensive digital repository of all scales and all editions of USGS printed topographic maps that is easily discovered, browsed, and downloaded by the public at no cost. The HTMC provides ready access to maps that are no longer available for distribution in print. A digital file representing the original paper historical topographic map is produced for each historical map in the HTMC in georeferenced PDF (GeoPDF) format (a portable document format [PDF] with a geospatial extension).

  19. A Map of Kilometer-Scale Topographic Roughness of Mercury

    NASA Astrophysics Data System (ADS)

    Kreslavsky, M. A.; Head, J. W., III; Kokhanov, A. A.; Neumann, G. A.; Smith, D. E.; Zuber, M. T.; Kozlova, N. A.

    2014-12-01

    We present a new map of the multiscale topographic roughness of the northern circumpolar area of Mercury. The map utilizes high internal vertical precision surface ranging by the laser altimeter MLA onboard MESSENGER mission to Mercury. This map is analogous to global roughness maps that had been created by M.A.K. with collaborators for Mars (MOLA data) and the Moon (LOLA data). As measures of roughness, we used the interquartile range of along-track profile curvature at three baselines: 0.7 km, 2.8 km, and 11 km. Unlike in the cases of LOLA data for the Moon, and MOLA data for Mars, the MLA data allow high-quality roughness mapping only for a small part of the surface of the planet: the map covers 65N - 84N latitude zone, where the density of MLA data is the highest. The map captures the regional variations of the typical background topographic texture of the surface. The map shows the clear dichotomy between smooth northern plains and rougher cratered terrains. The lowered contrast of this dichotomy at the shortest (0.7 km) baseline indicates that regolith on Mercury is thicker and/or gardening processes are more intensive in comparison to the Moon, approximately by a factor of three. The map reveals sharp roughness contrasts within northern plains of Mercury that we interpret as geologic boundaries of volcanic plains of different age. In particular, the map suggests a younger volcanic plains unit inside Goethe basin and inside another unnamed stealth basin. -- Acknowledgement: Work on data processing was carried out at MIIGAiK by MAK, AAK, NAK and supported by Russian Science Foundation project 14-22-00197.

  20. Topographic maps of Serbia prior to the WWI

    NASA Astrophysics Data System (ADS)

    Kovács, B.

    2009-04-01

    Compilation of high or medium scale topographic surveys always played an important role in the geosciences of newly independent countries. Serbia formally has gained back its independency from the Turkish Empire sortly after the 1878 Congress of Berlin. The newly founded Institute of Military Geography in Beograd made efforts to complete a topographic series of 1:75,000 scale. Actually two serieses have been completed prior to the Balkan Wars of 1912-13, one with Latin and the other with the Cyrillic name descriptions, in French and Serbian languages, respectively. The scale of these map systems are identical to the Habsburg general mapping of Central Europe, covering also Serbia. As the Habsburg maps used the prime meridian of Ferro, their Serbian counterparts were using the one of Paris, which is a mere longitude shift of 20 degrees in round numbers. The geodetic basis behind the Serbian maps is probably the Habsburg triangulation in the Balkans (1871-75) - this would explain why the Vienna-centered Hermannskogel datum has been used also in Yugoslavia and Serbia even till nowadays. The French language series has red planar graphic elements (only the names, elevations and the railroad lines are written or drawn in back), blue, brown and green prints were used for waters, contours and vegetation. The Serbian language series mostly reminds to the modern maps albeit it has only three colors (black, brown and green).

  1. White Oak Creek Watershed topographic map and related materials

    SciTech Connect

    Farrow, N.D.

    1981-04-01

    On March 22, 1978 a contract was let to Accu-Air Surveys, Inc., of Seymour, Indiana, to produce a topographic map of the White Oak Creek Watershed. Working from photography and ground control surveys, Accu-Air produced a map to ORNL's specifications. The map is in four sections (N.W., N.E., S.W., S.E.) at a scale of 1:2400. Contour intervals are 5 ft (1.5 m) with accented delineations every 25 ft (7.6 m). The scribe method was used for the finished map. Planimetric features, roads, major fence lines, drainage features, and tree lines are included. The ORNL grid is the primary coordinate system which is superimposed on the state plain coordinates.

  2. Topographical mapping system for radiological and hazardous environments acceptance testing

    NASA Astrophysics Data System (ADS)

    Armstrong, Gary A.; Dochat, G. R.

    1997-09-01

    During the summer of 1996, the topographical mapping system (TMS) for hazardous and radiological environments and its accompanying three-dimensional (3-D) visualization tool, the interactive computer-enhanced remote-viewing system (ICERVS), were delivered to Oak Ridge National Laboratory (ORNL). ORNL and Mechanical Technology, Inc., performed final acceptance testing of the TMS during the next eight months. The TMS was calibrated and characterized during this period. This paper covers the calibration, characterization, and acceptance testing of the TMS. Development of the TMS and the ICERVS was initiated by the U.S. Department of Energy (DOE) for the purpose of characterization and remediation of underground storage tanks (USTs) at DOE sites across the country. DOE required a 3-D, topographical mapping system suitable for use in hazardous and radiological environments. The intended application is the mapping of the interior of USTs as part of DOE's waste characterization and remediation efforts and to obtain baseline data on the content of the storage tank interiors as well as data on changes in the tank contents and levels brought about by waste remediation steps. Initially targeted for deployment at the Hanford Washington site, the TMS is designed to be a self-contained, compact, reconfigurable system that is capable of providing rapid, variable-resolution mapping information in poorly characterized workspaces with a minimum of operator intervention.

  3. Topographic Mapping of Pluto and Charon Using New Horizons Data

    NASA Astrophysics Data System (ADS)

    Schenk, P. M.; Beyer, R. A.; Moore, J. M.; Spencer, J. R.; McKinnon, W. B.; Howard, A. D.; White, O. M.; Umurhan, O. M.; Singer, K.; Stern, S. A.; Weaver, H. A.; Young, L. A.; Ennico Smith, K.; Olkin, C.; Horizons Geology, New; Geophysics Imaging Team

    2016-06-01

    New Horizons 2015 flyby of the Pluto system has resulted in high-resolution topographic maps of Pluto and Charon, the most distant objects so mapped. DEM's over ~30% of each object were produced at 100-300 m vertical and 300-800 m spatial resolutions, in hemispheric maps and high-resolution linear mosaics. Both objects reveal more relief than was observed at Triton. The dominant 800-km wide informally named Sputnik Planum bright ice deposit on Pluto lies in a broad depression 3 km deep, flanked by dispersed mountains 3-5 km high. Impact craters reveal a wide variety of preservation states from pristine to eroded, and long fractures are several km deep with throw of 0-2 km. Topography of this magnitude suggests the icy shell of Pluto is relatively cold and rigid. Charon has global relief of at least 10 km, including ridges of 2-3 km and troughs of 3-5 km of relief. Impact craters are up to 6 km deep. Vulcan Planum consists of rolling plains and forms a topographic moat along its edge, suggesting viscous flow.

  4. Topographic Maps of Visual Spatial Attention in Human Parietal Cortex

    PubMed Central

    Silver, Michael A.; Ress, David; Heeger, David J.

    2008-01-01

    Functional magnetic resonance imaging (fMRI) was used to measure activity in human parietal cortex during performance of a visual detection task in which the focus of attention systematically traversed the visual field. Critically, the stimuli were identical on all trials (except for slight contrast changes in a fully randomized selection of the target locations) whereas only the cued location varied. Traveling waves of activity were observed in posterior parietal cortex consistent with shifts in covert attention in the absence of eye movements. The temporal phase of the fMRI signal in each voxel indicated the corresponding visual field location. Visualization of the distribution of temporal phases on a flattened representation of parietal cortex revealed at least two distinct topographically organized cortical areas within the intraparietal sulcus (IPS), each representing the contralateral visual field. Two cortical areas were proposed based on this topographic organization, which we refer to as IPS1 and IPS2 to indicate their locations within the IPS. This nomenclature is neutral with respect to possible homologies with well-established cortical areas in the monkey brain. The two proposed cortical areas exhibited relatively little response to passive visual stimulation in comparison with early visual areas. These results provide evidence for multiple topographic maps in human parietal cortex. PMID:15817643

  5. Symobls and Meaning in Topographic Maps: Some Limintations Due to Aspects of Map Design.

    ERIC Educational Resources Information Center

    Keates, J. S.

    The approach to topographic map production has been highly organized and systematic with respect to scale, projection, grid, etc., so that the user can expect a high degree of locational accuracy. Less attention has been given by cartographers to symbolic information yielded by the map. Symbolization (information reduction) is required at all…

  6. A Comparison of Spatial Analysis Methods for the Construction of Topographic Maps of Retinal Cell Density

    PubMed Central

    Garza-Gisholt, Eduardo; Hemmi, Jan M.; Hart, Nathan S.; Collin, Shaun P.

    2014-01-01

    Topographic maps that illustrate variations in the density of different neuronal sub-types across the retina are valuable tools for understanding the adaptive significance of retinal specialisations in different species of vertebrates. To date, such maps have been created from raw count data that have been subjected to only limited analysis (linear interpolation) and, in many cases, have been presented as iso-density contour maps with contour lines that have been smoothed ‘by eye’. With the use of stereological approach to count neuronal distribution, a more rigorous approach to analysing the count data is warranted and potentially provides a more accurate representation of the neuron distribution pattern. Moreover, a formal spatial analysis of retinal topography permits a more robust comparison of topographic maps within and between species. In this paper, we present a new R-script for analysing the topography of retinal neurons and compare methods of interpolating and smoothing count data for the construction of topographic maps. We compare four methods for spatial analysis of cell count data: Akima interpolation, thin plate spline interpolation, thin plate spline smoothing and Gaussian kernel smoothing. The use of interpolation ‘respects’ the observed data and simply calculates the intermediate values required to create iso-density contour maps. Interpolation preserves more of the data but, consequently includes outliers, sampling errors and/or other experimental artefacts. In contrast, smoothing the data reduces the ‘noise’ caused by artefacts and permits a clearer representation of the dominant, ‘real’ distribution. This is particularly useful where cell density gradients are shallow and small variations in local density may dramatically influence the perceived spatial pattern of neuronal topography. The thin plate spline and the Gaussian kernel methods both produce similar retinal topography maps but the smoothing parameters used may affect

  7. A comparison of spatial analysis methods for the construction of topographic maps of retinal cell density.

    PubMed

    Garza-Gisholt, Eduardo; Hemmi, Jan M; Hart, Nathan S; Collin, Shaun P

    2014-01-01

    Topographic maps that illustrate variations in the density of different neuronal sub-types across the retina are valuable tools for understanding the adaptive significance of retinal specialisations in different species of vertebrates. To date, such maps have been created from raw count data that have been subjected to only limited analysis (linear interpolation) and, in many cases, have been presented as iso-density contour maps with contour lines that have been smoothed 'by eye'. With the use of stereological approach to count neuronal distribution, a more rigorous approach to analysing the count data is warranted and potentially provides a more accurate representation of the neuron distribution pattern. Moreover, a formal spatial analysis of retinal topography permits a more robust comparison of topographic maps within and between species. In this paper, we present a new R-script for analysing the topography of retinal neurons and compare methods of interpolating and smoothing count data for the construction of topographic maps. We compare four methods for spatial analysis of cell count data: Akima interpolation, thin plate spline interpolation, thin plate spline smoothing and Gaussian kernel smoothing. The use of interpolation 'respects' the observed data and simply calculates the intermediate values required to create iso-density contour maps. Interpolation preserves more of the data but, consequently includes outliers, sampling errors and/or other experimental artefacts. In contrast, smoothing the data reduces the 'noise' caused by artefacts and permits a clearer representation of the dominant, 'real' distribution. This is particularly useful where cell density gradients are shallow and small variations in local density may dramatically influence the perceived spatial pattern of neuronal topography. The thin plate spline and the Gaussian kernel methods both produce similar retinal topography maps but the smoothing parameters used may affect the outcome.

  8. A Two-Phase Space Resection Model for Accurate Topographic Reconstruction from Lunar Imagery with PushbroomScanners

    PubMed Central

    Xu, Xuemiao; Zhang, Huaidong; Han, Guoqiang; Kwan, Kin Chung; Pang, Wai-Man; Fang, Jiaming; Zhao, Gansen

    2016-01-01

    Exterior orientation parameters’ (EOP) estimation using space resection plays an important role in topographic reconstruction for push broom scanners. However, existing models of space resection are highly sensitive to errors in data. Unfortunately, for lunar imagery, the altitude data at the ground control points (GCPs) for space resection are error-prone. Thus, existing models fail to produce reliable EOPs. Motivated by a finding that for push broom scanners, angular rotations of EOPs can be estimated independent of the altitude data and only involving the geographic data at the GCPs, which are already provided, hence, we divide the modeling of space resection into two phases. Firstly, we estimate the angular rotations based on the reliable geographic data using our proposed mathematical model. Then, with the accurate angular rotations, the collinear equations for space resection are simplified into a linear problem, and the global optimal solution for the spatial position of EOPs can always be achieved. Moreover, a certainty term is integrated to penalize the unreliable altitude data for increasing the error tolerance. Experimental results evidence that our model can obtain more accurate EOPs and topographic maps not only for the simulated data, but also for the real data from Chang’E-1, compared to the existing space resection model. PMID:27077855

  9. A Two-Phase Space Resection Model for Accurate Topographic Reconstruction from Lunar Imagery with PushbroomScanners.

    PubMed

    Xu, Xuemiao; Zhang, Huaidong; Han, Guoqiang; Kwan, Kin Chung; Pang, Wai-Man; Fang, Jiaming; Zhao, Gansen

    2016-04-11

    Exterior orientation parameters' (EOP) estimation using space resection plays an important role in topographic reconstruction for push broom scanners. However, existing models of space resection are highly sensitive to errors in data. Unfortunately, for lunar imagery, the altitude data at the ground control points (GCPs) for space resection are error-prone. Thus, existing models fail to produce reliable EOPs. Motivated by a finding that for push broom scanners, angular rotations of EOPs can be estimated independent of the altitude data and only involving the geographic data at the GCPs, which are already provided, hence, we divide the modeling of space resection into two phases. Firstly, we estimate the angular rotations based on the reliable geographic data using our proposed mathematical model. Then, with the accurate angular rotations, the collinear equations for space resection are simplified into a linear problem, and the global optimal solution for the spatial position of EOPs can always be achieved. Moreover, a certainty term is integrated to penalize the unreliable altitude data for increasing the error tolerance. Experimental results evidence that our model can obtain more accurate EOPs and topographic maps not only for the simulated data, but also for the real data from Chang'E-1, compared to the existing space resection model.

  10. Standard for the U.S. Geological Survey Historical Topographic Map Collection

    USGS Publications Warehouse

    Allord, Gregory J.; Fishburn, Kristin A.; Walter, Jennifer L.

    2014-01-01

    This document defines the digital map product of the U.S. Geological Survey (USGS) Historical Topographic Map Collection (HTMC). The HTMC is a digital archive of about 190,000 printed topographic quadrangle maps published by the USGS from the inception of the topographic mapping program in 1884 until the last paper topographic map using lithographic printing technology was published in 2006. The HTMC provides a comprehensive digital repository of all scales and all editions of USGS printed topographic maps that is easily discovered, browsed, and downloaded by the public at no cost. Each printed topographic map is scanned “as is” and captures the content and condition of each map. The HTMC provides ready access to maps that are no longer available for distribution in print. A new generation of topographic maps called “US Topo” was defined in 2009. US Topo maps, though modeled on the legacy 7.5-minute topographic maps, conform to different standards. For more information on the HTMC, see the project Web site at: http://nationalmap.gov/historical/.

  11. A Hands-On Approach to Understanding Topographic Maps and Their Construction.

    ERIC Educational Resources Information Center

    Bart, Henry Anthony

    1991-01-01

    Describes a topographic map exercise designed for lab session of two to three hours in an introductory geology course. Students are taught the basic principles of topographic map construction and are then required to make a map of a section of campus. Author claims the approach has improved student test performance and resulted in a deeper…

  12. The topographic grain concept in DEM-based geomorphometric mapping

    NASA Astrophysics Data System (ADS)

    Józsa, Edina

    2016-04-01

    A common drawback of geomorphological analyses based on digital elevation datasets is the definition of search window size for the derivation of morphometric variables. The fixed-size neighbourhood determines the scale of the analysis and mapping, which can lead to the generalization of smaller surface details or the elimination of larger landform elements. The methods of DEM-based geomorphometric mapping are constantly developing into the direction of multi-scale landform delineation, but the optimal threshold for search window size is still a limiting factor. A possible way to determine the suitable value for the parameter is to consider the topographic grain principle (Wood, W. F. - Snell, J. B. 1960, Pike, R. J. et al. 1989). The calculation is implemented as a bash shell script for GRASS GIS to determine the optimal threshold for the r.geomorphon module. The approach relies on the potential of the topographic grain to detect the characteristic local ridgeline-to-channel spacing. By calculating the relative relief values with nested neighbourhood matrices it is possible to define a break-point where the increase rate of local relief encountered by the sample is significantly reducing. The geomorphons approach (Jasiewicz, J. - Stepinski, T. F. 2013) is a cell-based DEM classification method for the identification of landform elements at a broad range of scales by using line-of-sight technique. The landforms larger than the maximum lookup distance are broken down to smaller elements therefore the threshold needs to be set for a relatively large value. On the contrary, the computational requirements and the size of the study sites determine the upper limit for the value. Therefore the aim was to create a tool that would help to determine the optimal parameter for r.geomorphon tool. As a result it would be possible to produce more objective and consistent maps with achieving the full efficiency of this mapping technique. For the thorough analysis on the

  13. Acceleration of Topographic Map Production Using Semi-Automatic DTM from Dsm Radar Data

    NASA Astrophysics Data System (ADS)

    Rizaldy, Aldino; Mayasari, Ratna

    2016-06-01

    Badan Informasi Geospasial (BIG) is government institution in Indonesia which is responsible to provide Topographic Map at several map scale. For medium map scale, e.g. 1:25.000 or 1:50.000, DSM from Radar data is very good solution since Radar is able to penetrate cloud that usually covering tropical area in Indonesia. DSM Radar is produced using Radargrammetry and Interferrometry technique. The conventional method of DTM production is using "stereo-mate", the stereo image created from DSM Radar and ORRI (Ortho Rectified Radar Image), and human operator will digitizing masspoint and breakline manually using digital stereoplotter workstation. This technique is accurate but very costly and time consuming, also needs large resource of human operator. Since DSMs are already generated, it is possible to filter DSM to DTM using several techniques. This paper will study the possibility of DSM to DTM filtering using technique that usually used in point cloud LIDAR filtering. Accuracy of this method will also be calculated using enough numbers of check points. If the accuracy meets the requirement, this method is very potential to accelerate the production of Topographic Map in Indonesia.

  14. Topographic Maps: Rediscovering an Accessible Data Source for Land Cover Change Research

    ERIC Educational Resources Information Center

    McChesney, Ron; McSweeney, Kendra

    2005-01-01

    Given some limitations of satellite imagery for the study of land cover change, we draw attention here to a robust and often overlooked data source for use in student research: USGS topographic maps. Topographic maps offer an inexpensive, rapid, and accessible means for students to analyze land cover change over large areas. We demonstrate our…

  15. Tactile Robotic Topographical Mapping Without Force or Contact Sensors

    NASA Technical Reports Server (NTRS)

    Burke, Kevin; Melko, Joseph; Krajewski, Joel; Cady, Ian

    2008-01-01

    A method of topographical mapping of a local solid surface within the range of motion of a robot arm is based on detection of contact between the surface and the end effector (the fixture or tool at the tip of the robot arm). The method was conceived to enable mapping of local terrain by an exploratory robot on a remote planet, without need to incorporate delicate contact switches, force sensors, a vision system, or other additional, costly hardware. The method could also be used on Earth for determining the size and shape of an unknown surface in the vicinity of a robot, perhaps in an unanticipated situation in which other means of mapping (e.g., stereoscopic imaging or laser scanning with triangulation) are not available. The method uses control software modified to utilize the inherent capability of the robotic control system to measure the joint positions, the rates of change of the joint positions, and the electrical current demanded by the robotic arm joint actuators. The system utilizes these coordinate data and the known robot-arm kinematics to compute the position and velocity of the end effector, move the end effector along a specified trajectory, place the end effector at a specified location, and measure the electrical currents in the joint actuators. Since the joint actuator current is approximately proportional to the actuator forces and torques, a sudden rise in joint current, combined with a slowing of the joint, is a possible indication of actuator stall and surface contact. Hence, even though the robotic arm is not equipped with contact sensors, it is possible to sense contact (albeit with reduced sensitivity) as the end effector becomes stalled against a surface that one seeks to measure.

  16. Do QEEG topographic map data have a multivariate normal distribution? Implications for tests of individual maps.

    PubMed

    Lawson, J S; Adams, S J; Brunet, D G; Criollo, M; Galin, H; MacCrimmon, D J

    1998-01-01

    The study was designed to test whether topographic map data expressed in log power units have a multivariate normal (MVN) distribution in a healthy population, and to determine if any deviation from normality poses serious difficulties for the use of standard multivariate statistical tests in assessing the significance of deformations of the map in individual cases. Data on 361 healthy adults using 20 electrodes in the classic 10/20 configuration were recorded in six frequency bands. The log-transformed power data were shown to deviate markedly from MVN. The actual distributions of multivariate tests were computed for the sample using the 'jackknife' method, and shown to deviate markedly from the F-distributions that would be expected for MVN data. These 'jackknife' sampling distributions were then used to demonstrate significant deformations in the topographic maps of a patient who had sustained traumatic head injury.

  17. Brain and human pain: topographic EEG amplitude and coherence mapping.

    PubMed

    Chen, A C; Rappelsberger, P

    1994-01-01

    Nineteen young healthy volunteers (8 males and 11 females) participated in an experimental ice-cube cold pressor test to study topographic changes of EEG parameters in response to painful stimulation. EEG was recorded with 19 electrodes and quantified by amplitude and coherence analyses. Mean amplitudes and values for local (between adjacent electrodes) and interhemispheric (between electrodes on homologous sites of both hemispheres) coherences were computed for six frequency bands. For the evaluation of changes between EEG at rest (baseline) and EEG during painful stimulation (right or left hand), non-parametric paired Wilcoxon tests were performed. The obtained descriptive error probabilities were presented in probability maps. In the behavioural pain tolerance and subjective pain ratings, no difference in gender or stimulation condition was observed. Under painful stimulation the results showed: (A) most pronounced decrease of Alpha amplitude in the central areas and some increase of high Beta amplitude; (B) increase of local coherence for Alpha and Beta 2 mainly in central regions and centro-frontal leads; and (C) increase of interhemispheric coherence for Alpha and Beta 2 in the central areas. The results of this study indicate clearly that peripheral painful stimulation is reflected by EEG changes. Decrease of EEG amplitude and simultaneous increase of EEG coherence in the central regions can be cortical correlates of human pain.

  18. Develop Advanced Nonlinear Signal Analysis Topographical Mapping System

    NASA Technical Reports Server (NTRS)

    Jong, Jen-Yi

    1997-01-01

    During the development of the SSME, a hierarchy of advanced signal analysis techniques for mechanical signature analysis has been developed by NASA and AI Signal Research Inc. (ASRI) to improve the safety and reliability for Space Shuttle operations. These techniques can process and identify intelligent information hidden in a measured signal which is often unidentifiable using conventional signal analysis methods. Currently, due to the highly interactive processing requirements and the volume of dynamic data involved, detailed diagnostic analysis is being performed manually which requires immense man-hours with extensive human interface. To overcome this manual process, NASA implemented this program to develop an Advanced nonlinear signal Analysis Topographical Mapping System (ATMS) to provide automatic/unsupervised engine diagnostic capabilities. The ATMS will utilize a rule-based Clips expert system to supervise a hierarchy of diagnostic signature analysis techniques in the Advanced Signal Analysis Library (ASAL). ASAL will perform automatic signal processing, archiving, and anomaly detection/identification tasks in order to provide an intelligent and fully automated engine diagnostic capability. The ATMS has been successfully developed under this contract. In summary, the program objectives to design, develop, test and conduct performance evaluation for an automated engine diagnostic system have been successfully achieved. Software implementation of the entire ATMS system on MSFC's OISPS computer has been completed. The significance of the ATMS developed under this program is attributed to the fully automated coherence analysis capability for anomaly detection and identification which can greatly enhance the power and reliability of engine diagnostic evaluation. The results have demonstrated that ATMS can significantly save time and man-hours in performing engine test/flight data analysis and performance evaluation of large volumes of dynamic test data.

  19. Novel Models of Visual Topographic Map Alignment in the Superior Colliculus

    PubMed Central

    El-Ghazawi, Tarek A.; Triplett, Jason W.

    2016-01-01

    The establishment of precise neuronal connectivity during development is critical for sensing the external environment and informing appropriate behavioral responses. In the visual system, many connections are organized topographically, which preserves the spatial order of the visual scene. The superior colliculus (SC) is a midbrain nucleus that integrates visual inputs from the retina and primary visual cortex (V1) to regulate goal-directed eye movements. In the SC, topographically organized inputs from the retina and V1 must be aligned to facilitate integration. Previously, we showed that retinal input instructs the alignment of V1 inputs in the SC in a manner dependent on spontaneous neuronal activity; however, the mechanism of activity-dependent instruction remains unclear. To begin to address this gap, we developed two novel computational models of visual map alignment in the SC that incorporate distinct activity-dependent components. First, a Correlational Model assumes that V1 inputs achieve alignment with established retinal inputs through simple correlative firing mechanisms. A second Integrational Model assumes that V1 inputs contribute to the firing of SC neurons during alignment. Both models accurately replicate in vivo findings in wild type, transgenic and combination mutant mouse models, suggesting either activity-dependent mechanism is plausible. In silico experiments reveal distinct behaviors in response to weakening retinal drive, providing insight into the nature of the system governing map alignment depending on the activity-dependent strategy utilized. Overall, we describe novel computational frameworks of visual map alignment that accurately model many aspects of the in vivo process and propose experiments to test them. PMID:28027309

  20. Accuracy assessment of topographic mapping using UAV image integrated with satellite images

    NASA Astrophysics Data System (ADS)

    Azmi, S. M.; Ahmad, Baharin; Ahmad, Anuar

    2014-02-01

    Unmanned Aerial Vehicle or UAV is extensively applied in various fields such as military applications, archaeology, agriculture and scientific research. This study focuses on topographic mapping and map updating. UAV is one of the alternative ways to ease the process of acquiring data with lower operating costs, low manufacturing and operational costs, plus it is easy to operate. Furthermore, UAV images will be integrated with QuickBird images that are used as base maps. The objective of this study is to make accuracy assessment and comparison between topographic mapping using UAV images integrated with aerial photograph and satellite image. The main purpose of using UAV image is as a replacement for cloud covered area which normally exists in aerial photograph and satellite image, and for updating topographic map. Meanwhile, spatial resolution, pixel size, scale, geometric accuracy and correction, image quality and information contents are important requirements needed for the generation of topographic map using these kinds of data. In this study, ground control points (GCPs) and check points (CPs) were established using real time kinematic Global Positioning System (RTK-GPS) technique. There are two types of analysis that are carried out in this study which are quantitative and qualitative assessments. Quantitative assessment is carried out by calculating root mean square error (RMSE). The outputs of this study include topographic map and orthophoto. From this study, the accuracy of UAV image is ± 0.460 m. As conclusion, UAV image has the potential to be used for updating of topographic maps.

  1. Topographic map of Mars M 25M RKN

    USGS Publications Warehouse

    ,

    2002-01-01

    the International Astronomical Union (IAU) and the International Association of Geodesy (IAG) (Seidelmann and others, 2002), these inertial coordinates were converted into the planet-fixed coordinates (longitude and latitude) used on this map. These values include the orientation of the north pole of Mars (including the effects of precession), the rotation rate of Mars, and a value for W0 of 176.630°, where W0 is the angle along the equator to the east, between the 0° meridian and the equator's intersection with the celestial equator at the standard epoch J2000.0 (Seidelmann and others, 2002). This value of W0 was chosen (Duxbury and others, 2002) in order to place the 0° meridian through the center of the small (~500 m) crater Airy-0, located in the crater Airy (de Vaucouleurs and others, 1973; Seidelmann and others, 2002). Longitude increases to the east, and latitude is planetocentric as allowed by IAU/IAG standards (Seidelmann and others, 2002) and in accordance with current NASA and USGS standards (Duxbury and others, 2002). A secondary grid (printed in red) has been added to the map as a reference to the west longitude/planetographic latitude system that is also allowed by IAU/IAG standards (Seidelmann and others, 2002) and has also been used for Mars. The figure adopted to compute this secondary grid is an oblate spheroid with an equatorial radius of 3,396.19 km and a polar radius of 3,376.2 km (Duxbury and others, 2002; Seidelmann and others, 2002). MAPPING TECHNIQUES To create the topographic base image, the original DEM produced by the MOLA team in Simple Cylindrical projection with a resolution of 64 pixels per degree was projected into the Mercator and Polar Stereographic pieces. A shaded relief was generated from each DEM with a sun angle of 30° from horizontal and a sun azimuth of 270°, as measured clockwise from north, and a vertical exaggeration of 100%. Illumination is from the west, which follows a long-standing USGS tradition for planetary maps

  2. Machine processing of Landsat MSS data and DMA topographic data for forest cover type mapping

    NASA Technical Reports Server (NTRS)

    Fleming, M. D.; Hoffer, R. M.

    1979-01-01

    A study with the objective of developing and testing techniques which utilize both digital topographic data and Landsat MSS spectral data to map forest cover types is examined. Emphasis is given to the topographic distribution model (TDM), which combines point-by-point information about forest species, elevation, slope, and aspect to quantitatively describe topographic positions. Results show the stratified random sample approach to be very effective for developing the TDM, while the use of topographic data significantly improved the overall classification accuracy of forest cover types as compared to using spectral data alone.

  3. Topographic basis and prime meridians used in historical Hungarian geological maps

    NASA Astrophysics Data System (ADS)

    Galambos, Csilla

    2010-05-01

    Similarly to other themapic map types, geological maps are almost always compiled in a pre-designed topographic base. This method was also applied in case of the historical version of geological maps; the field observations and interpretations were signed in a base topographic map. This contribution provides a short overview of the topographic bases used at the different Hungarian historical geological maps from the 18th century to the WWII. The topographic basis is a key to geo-reference these maps, allowing their GIS integration and the spatial analysis of the knowledge evolution of the Hungarian geology. A quite interesting and less discussed aspect of the geodetic background of these maps is the usage of prime meridians. The London meridian was used quite early at a geological map of Hungary, compiled by Townson (1797). Later, the prime meridian of Ferro was widely used, similarly to the maps of the continental Europe. However, the Ferro meridian is the meridian of Paris, increased by 20 degrees in round numbers. The real introduction of the Greenwich meridian occured only in the first half of the 20th century in the Hungarian topographic, thus also in the geological maps.

  4. DATA QUALIFICATION REPORT: DATA QUALIFICATION REPORT FOR 1991 1:1200 TOPOGRAPHIC MAPS FOR USE ON THE YUCCA MOUNTAIN PROJECT

    SciTech Connect

    M.F. Knop; T.A. Grant; R.W. Bonisolli

    2005-06-25

    This Data Qualification Report (DQR) is prepared in accordance with the provisions of AP-SIII.2Q, Rev. 0, ICN 3, Qualification of Unqualified Data and the Documentation of Rationale for Accepted Data and Data Qualification Plan for 1991 Topographic Maps 1:1200 Scale for use on the Yucca Mountain Project, DQP-WHS-CI-000001, Rev. 00 (BSC 2002a). This DQR presents an evaluation of a set of 90 topographic sheets at 1:1200 scale (and an associated electronic file) that covers an approximate 18 square mile area surrounding the proposed Yucca Mountain Project repository surface facilities location in Midway Valley, Nevada. These maps, that require qualification, are now being used to determine the physical characteristics of watershed sub-areas, interconnecting channels, and drainage channel cross-sections for hydrologic engineering studies of the north portal pad and vicinity. The result of this effort is to qualify one data tracking number (DTN) containing the electronic version of the mapping data. This DTN is: M09906COV98462.000. Coverage: TOP02FTS. The underlying quality assurance (QA) issue associated with these topographic maps is that the maps were originally designated as not for use in the design of items important to safety, waste isolation, and/or of programmatic importance. The maps were therefore generated outside the U.S. Department of Energy Office of Civilian Radioactive Waste Management (OCRWM) QA program. Based on a comparison with corroborating information, this report concludes that the topographic maps are qualified. The comparison found that the mapping was reasonably accurate when compared with other mapping and survey data within the coverage area of the maps. Relative map accuracy was found to be very good and suitable for the hydrologic engineering studies being considered. Absolute accuracy is good but could not be demonstrated to comply with national map accuracy standards. Point locations that require high absolute accuracy should be

  5. Vector Topographic Map Data over the BOREAS NSA and SSA in SIF Format

    NASA Technical Reports Server (NTRS)

    Knapp, David; Nickeson, Jaime; Hall, Forrest G. (Editor)

    2000-01-01

    This data set contains vector contours and other features of individual topographic map sheets from the National Topographic Series (NTS). The map sheet files were received in Standard Interchange Format (SIF) and cover the BOReal Ecosystem-Atmosphere Study (BOREAS) Northern Study Area (NSA) and Southern Study Area (SSA) at scales of 1:50,000 and 1:250,000. The individual files are stored in compressed Unix tar archives.

  6. Develop advanced nonlinear signal analysis topographical mapping system

    NASA Technical Reports Server (NTRS)

    Jong, Jen-Yi

    1993-01-01

    The SSME has been undergoing extensive flight certification and developmental testing, which involves some 250 health monitoring measurements. Under the severe temperature pressure, and dynamic environments sustained during operation, numerous major component failures have occurred, resulting in extensive engine hardware damage and scheduling losses. To enhance SSME safety and reliability, detailed analysis and evaluation of the measurements signal are mandatory to assess its dynamic characteristics and operational condition. Efficient and reliable signal detection techniques will reduce catastrophic system failure risks and expedite the evaluation of both flight and ground test data, and thereby reduce launch turn-around time. The basic objective of this contract are threefold: (1) Develop and validate a hierarchy of innovative signal analysis techniques for nonlinear and nonstationary time-frequency analysis. Performance evaluation will be carried out through detailed analysis of extensive SSME static firing and flight data. These techniques will be incorporated into a fully automated system. (2) Develop an advanced nonlinear signal analysis topographical mapping system (ATMS) to generate a Compressed SSME TOPO Data Base (CSTDB). This ATMS system will convert tremendous amounts of complex vibration signals from the entire SSME test history into a bank of succinct image-like patterns while retaining all respective phase information. A high compression ratio can be achieved to allow the minimal storage requirement, while providing fast signature retrieval, pattern comparison, and identification capabilities. (3) Integrate the nonlinear correlation techniques into the CSTDB data base with compatible TOPO input data format. Such integrated ATMS system will provide the large test archives necessary for a quick signature comparison. This study will provide timely assessment of SSME component operational status, identify probable causes of malfunction, and indicate

  7. Develop advanced nonlinear signal analysis topographical mapping system

    NASA Technical Reports Server (NTRS)

    1994-01-01

    The Space Shuttle Main Engine (SSME) has been undergoing extensive flight certification and developmental testing, which involves some 250 health monitoring measurements. Under the severe temperature, pressure, and dynamic environments sustained during operation, numerous major component failures have occurred, resulting in extensive engine hardware damage and scheduling losses. To enhance SSME safety and reliability, detailed analysis and evaluation of the measurements signal are mandatory to assess its dynamic characteristics and operational condition. Efficient and reliable signal detection techniques will reduce catastrophic system failure risks and expedite the evaluation of both flight and ground test data, and thereby reduce launch turn-around time. The basic objective of this contract are threefold: (1) develop and validate a hierarchy of innovative signal analysis techniques for nonlinear and nonstationary time-frequency analysis. Performance evaluation will be carried out through detailed analysis of extensive SSME static firing and flight data. These techniques will be incorporated into a fully automated system; (2) develop an advanced nonlinear signal analysis topographical mapping system (ATMS) to generate a Compressed SSME TOPO Data Base (CSTDB). This ATMS system will convert tremendous amount of complex vibration signals from the entire SSME test history into a bank of succinct image-like patterns while retaining all respective phase information. High compression ratio can be achieved to allow minimal storage requirement, while providing fast signature retrieval, pattern comparison, and identification capabilities; and (3) integrate the nonlinear correlation techniques into the CSTDB data base with compatible TOPO input data format. Such integrated ATMS system will provide the large test archives necessary for quick signature comparison. This study will provide timely assessment of SSME component operational status, identify probable causes of

  8. Landscape features, standards, and semantics in U.S. national topographic mapping databases

    USGS Publications Warehouse

    Varanka, Dalia

    2009-01-01

    The objective of this paper is to examine the contrast between local, field-surveyed topographical representation and feature representation in digital, centralized databases and to clarify their ontological implications. The semantics of these two approaches are contrasted by examining the categorization of features by subject domains inherent to national topographic mapping. When comparing five USGS topographic mapping domain and feature lists, results indicate that multiple semantic meanings and ontology rules were applied to the initial digital database, but were lost as databases became more centralized at national scales, and common semantics were replaced by technological terms.

  9. Mapping mean total annual precipitation in Belgium, by investigating the scale of topographic control at the regional scale

    NASA Astrophysics Data System (ADS)

    Meersmans, J.; Van Weverberg, K.; De Baets, S.; De Ridder, F.; Palmer, S. J.; van Wesemael, B.; Quine, T. A.

    2016-09-01

    Accurate precipitation maps are essential for ecological, environmental, element cycle and hydrological models that have a spatial output component. It is well known that topography has a major influence on the spatial distribution of precipitation and that increasing topographical complexity is associated with increased spatial heterogeneity in precipitation. This means that when mapping precipitation using classical interpolation techniques (e.g. regression, kriging, spline, inverse distance weighting, etc.), a climate measuring network with higher spatial density is needed in mountainous areas in order to obtain the same level of accuracy as compared to flatter regions. In this study, we present a mean total annual precipitation mapping technique that combines topographical information (i.e. elevation and slope orientation) with average total annual rain gauge data in order to overcome this problem. A unique feature of this paper is the identification of the scale at which topography influences the precipitation pattern as well as the direction of the dominant weather circulation. This method was applied for Belgium and surroundings and shows that the identification of the appropriate scale at which topographical obstacles impact precipitation is crucial in order to obtain reliable mean total annual precipitation maps. The dominant weather circulation is determined at 260°. Hence, this approach allows accurate mapping of mean annual precipitation patterns in regions characterized by rather high topographical complexity using a climate data network with a relatively low density and/or when more advanced precipitation measurement techniques, such as radar, aren't available, for example in the case of historical data.

  10. The impact of map orientation and generalisation on congestion decisions: a comparison of schematic-egocentric and topographic-allocentric maps.

    PubMed

    Crundall, David; Crundall, Elizabeth; Burnett, Gary; Shalloe, Sally; Sharples, Sarah

    2011-08-01

    Map information for drivers is usually presented in an allocentric-topographic form (as with printed maps) or in an egocentric-schematic form (as with road signs). The advent of new variable message boards on UK motorways raises the possibility of presenting road maps to reflect congestion ahead. Should these maps be allocentric-topographic or egocentric-schematic? This was assessed in an eye tracking study, with participants viewing maps of a motorway network in order to identify whether any congestion was relevant to their intended route. The schematic-egocentric maps were responded to most accurately with shorter fixation durations suggesting easier processing. In particular, the driver's entrance and intended exit from the map were attended to more in the allocentric maps. Individual differences in mental rotation ability also seem to contribute to poor performance on allocentric maps. The results favour schematic-egocentric maps for roadside congestion information, but also provide theoretical insights into map-rotation and individual differences. Statement of Relevance: This study informs designers and policy makers about optimum representations of traffic congestion on roadside variable message signs and, furthermore, demonstrates that individual differences contribute to problems with processing certain sign types. Schematic-egocentric representations of a motorway network produced the best results, as noted in behavioural and eye movement measures.

  11. THEMIS high-resolution digital terrain: Topographic and thermophysical mapping of Gusev Crater, Mars

    USGS Publications Warehouse

    Cushing, G.E.; Titus, T.N.; Soderblom, L.A.; Kirk, R.L.

    2009-01-01

    We discuss a new technique to generate high-resolution digital terrain models (DTMs) and to quantitatively derive and map slope-corrected thermophysical properties such as albedo, thermal inertia, and surface temperatures. This investigation is a continuation of work started by Kirk et al. (2005), who empirically deconvolved Thermal Emission Imaging System (THEMIS) visible and thermal infrared data of this area, isolating topographic information that produced an accurate DTM. Surface temperatures change as a function of many variables such as slope, albedo, thermal inertia, time, season, and atmospheric opacity. We constrain each of these variables to construct a DTM and maps of slope-corrected albedo, slope- and albedo-corrected thermal inertia, and surface temperatures across the scene for any time of day or year and at any atmospheric opacity. DTMs greatly facilitate analyses of the Martian surface, and the MOLA global data set is not finely scaled enough (128 pixels per degree, ???0.5 km per pixel near the equator) to be combined with newer data sets (e.g., High Resolution Imaging Science Experiment, Context Camera, and Compact Reconnaissance Imaging Spectrometer for Mars at ???0.25, ???6, and ???20 m per pixel, respectively), so new techniques to derive high-resolution DTMs are always being explored. This paper discusses our technique of combining a set of THEMIS visible and thermal infrared observations such that albedo and thermal inertia variations within the scene are eliminated and only topographic variations remain. This enables us to produce a high-resolution DTM via photoclinometry techniques that are largely free of albedo-induced errors. With this DTM, THEMIS observations, and a subsurface thermal diffusion model, we generate slope-corrected maps of albedo, thermal inertia, and surface temperatures. In addition to greater accuracy, these products allow thermophysical properties to be directly compared with topography.

  12. The Design and Product of National 1:1000000 Cartographic Data of Topographic Map

    NASA Astrophysics Data System (ADS)

    Wang, Guizhi

    2016-06-01

    National administration of surveying, mapping and geoinformation started to launch the project of national fundamental geographic information database dynamic update in 2012. Among them, the 1:50000 database was updated once a year, furthermore the 1:250000 database was downsized and linkage-updated on the basis. In 2014, using the latest achievements of 1:250000 database, comprehensively update the 1:1000000 digital line graph database. At the same time, generate cartographic data of topographic map and digital elevation model data. This article mainly introduce national 1:1000000 cartographic data of topographic map, include feature content, database structure, Database-driven Mapping technology, workflow and so on.

  13. Topographic mapping of oral structures - problems and applications in prosthodontics

    NASA Astrophysics Data System (ADS)

    Young, John M.; Altschuler, Bruce R.

    1981-10-01

    The diagnosis and treatment of malocclusion, and the proper design of restorations and prostheses, requires the determination of surface topography of the teeth and related oral structures. Surface contour measurements involve not only affected teeth, but adjacent and opposing surface contours composing a complexly interacting occlusal system. No a priori knowledge is predictable as dental structures are largely asymmetrical, non-repetitive, and non-uniform curvatures in 3-D space. Present diagnosis, treatment planning, and fabrication relies entirely on the generation of physical replicas during each stage of treatment. Fabrication is limited to materials that lend themselves to casting or coating, and to hand fitting and finishing. Inspection is primarily by vision and patient perceptual feedback. Production methods are time-consuming. Prostheses are entirely custom designed by manual methods, require costly skilled technical labor, and do not lend themselves to centralization. The potential improvement in diagnostic techniques, improved patient care, increased productivity, and cost-savings in material and man-hours that could result, if rapid and accurate remote measurement and numerical (automated) fabrication methods were devised, would be significant. The unique problems of mapping oral structures, and specific limitations in materials and methods, are reviewed.

  14. Topographic mapping flash lidar for multiple scattering, terrain, and forest mapping

    NASA Astrophysics Data System (ADS)

    Ramond, Tanya; Saiki, Eileen; Weimer, Carl; Applegate, Jeff; Hu, Yongxiang; Delker, Thomas; Ruppert, Lyle; Donley, Brian

    2011-06-01

    The Topographic Mapping Flash Lidar (TMFL) developed at Ball Aerospace combines a pushbroom format transmitter at 1064 nm with a flash focal plane receiver. The wide 20 degree field of view of the instrument enables broad swath coverage from a single laser pulse without the need for a scanning mechanism. These features make the TMFL design particularly well-suited for space flight. TMFL has been demonstrated during an airborne flight where data were gathered over a forest plot to measure tree waveforms. Topographic maps were assembled of river beds and geologic areas of high relief. The TMFL has also been used to observe multiple-scattering phenomena in clouds by illuminating a steam plume from the aircraft above. Signal was recorded off-axis from the illuminated laser line by as much as 1 degree. The TMFL study of multiple-scattering is valuable as it provides a unique way to significantly improve the calibration of measured backscatter for space lidars. Lidar backscatter was also measured from water surface and was shown to correlate with models of water surface roughness.

  15. A Topographic Image Map of the Sabrina Valles Region Including Information on Large Martian Impact Craters

    NASA Astrophysics Data System (ADS)

    Gehrke, S.; Köhring, R.; Barlow, N. G.; Gwinner, K.; Scholten, F.; Lehmann, H.; Albertz, J.

    2007-03-01

    The Catalog of Large Martian Impact Craters provides detailed information on 42,283 craters >5 km; it is planned to be integrated in the Topographic Image Map Mars 1:200,000 series. Such an update is shown in a special target map, based on HRSC data.

  16. Comparison of High Resolution Topographic Data Sources (SAR, IfSAR, and LiDAR) for Storm Surge Hazard Maps

    NASA Astrophysics Data System (ADS)

    Suarez, J. K. B.; Santiago, J. T.; Muldong, T. M. M.; Lagmay, A. M. A.; Caro, C. V.; Ramos, M.

    2014-12-01

    As an archipelagic country, the Philippines has experienced multiple storm surge threats. Moreover, the country's location, adjacent to the Pacific Ocean, results in an average of eight to nine typhoons that make landfall in a year. Storm surge hazard maps require high resolution topographic data to illustrate water inflow in the event of storm surges in vulnerable coastal areas and for accurate boundaries and coastline. Furthermore, potential hazard areas tend to be generalized in lower resolution data. The objective of this research is to compare three sources where accurate and quality storm surge hazard maps will draw bases from. For this purpose, the researcher used and compared SAR, IfSAR and LiDAR. The study involved comparing maps from different topographic data sources in Tacloban, in the province of Leyte. This area was one of the most heavily stricken areas during typhoon Haiyan where more than 6,000 people died and P34.37 billion worth of property was destroyed. In the comparison of the three sources, the following had be taken into consideration: cost of acquiring data, processing time, purpose, and the results. The research learned the following: Synthetic Aperture Radar or SAR produces data with a 30 meter resolution, while Interferometric Synthetic Aperture Radar (IfSAR) offers a resolution of 5 meters. Light Detection and Ranging (LiDAR) has the highest resolution of the three with 1 meter. In addition, higher costs are paid for more detailed topographic data. Also, processing time takes longer for finer details due to the memory of the computer units used for modelling. The sources were also evaluated on the necessity of the scale at which the maps are needed for specific purposes such as practicality and direct disaster response. Results from the maps have been validated through interviews with the locals on the experience of actual storm surges. Through this study, the researcher concluded that although LiDAR can offer a more detailed and

  17. Topographic Mapping of the Huygens Landing Site on Titan

    NASA Astrophysics Data System (ADS)

    Kirk, R. L.; Archinal, B. A.; Tomasko, M. G.; Rizk, B.; Soderblom, L. A.; Cook, D. A.; Howington-Kraus, E.; Becker, T. L.; Rosiek, M. R.; DISR Science Team

    2005-08-01

    The Huygens probe successfully accomplished the first descent and landing on Saturn's moon Titan on 2005 January 14. The onboard Descent Imager-Spectral Radiometer (DISR) experiment1 included three imaging cameras: high resolution (HRI), medium resolution (MRI), and side looking (SLI), which returned the first ever high resolution ( ˜ 60 m/pixel to a few mm/pixel) images of the surface of Titan. Approximately 596 separate images were returned. Many images, taken above ˜ 40 km, showed no surface detail due to haze; others were repeated images of the same scene from the surface. Still, about 40% of the images show surface features of Titan. We are analyzing these images photogrammetrically to derive topographic information for as much of the landing area as possible, from which detailed geologic studies can proceed. As part of this process we expect to recover a history of spacecraft pointing and position, constrained in part by altimetry and Earth-based VLBI tracking, thus providing a trajectory estimate with which other (e.g. atmospheric) data can be associated. Planned products consist of a series of image mosaics, digital elevation models, and orthomosaics, at multiple resolutions and nested within each other as appropriate. The first such products will be shown; they indicate total relief of ˜ 250 m in the higher albedo "highlands" near the landing point, with dark dendritic channels confined to the floors of canyons with side slopes up to 30 deg, indicating extremely active erosion. Later efforts will also concentrate on analyzing and merging the imaging and topographic information of these images with that of the Cassini RADAR, ISS, and VIMS imaging experiments, to develop a consistent global (horizontal and vertical) reference system for Titan to which these and future data sets can be referred. Reference: [1] M. Tomasko et al. Spc. Sci. Rev. 104, 469-551 (2002).

  18. Making Topographical Maps From SAR and Flood-Gauge Data

    NASA Technical Reports Server (NTRS)

    Imhoff, Marc Lee

    1990-01-01

    Collection of computer programs processes image data obtained by synthetic-aperture radar (SAR) along with measurements of water levels taken at selected points on ground to generate three-dimensional maps of surveyed terrain. Information in maps presented in variety of useful ways suited to study of such phenomena as flooding, damage caused by floods, flow of nutrients from forests to river and marine ecosystems, and effects of subsidence of ground or of rising sea levels.

  19. Stochastic interaction between neural activity and molecular cues in the formation of topographic maps

    PubMed Central

    Owens, Melinda T.; Feldheim, David A.; Stryker, Michael P.; Triplett, Jason W.

    2015-01-01

    SUMMARY Topographic maps in visual processing areas maintain the spatial order of the visual world. Molecular cues and neuronal activity both play critical roles in map formation, but their interaction remains unclear. Here, we demonstrate that when molecular- and activity-dependent cues are rendered nearly equal in force, they drive topographic mapping stochastically. The functional and anatomical representation of azimuth in the superior colliculus of heterozygous Islet2-EphA3 knock-in (Isl2EphA3/+) mice is variable: maps may be single, duplicated, or a combination of the two. This heterogeneity is not due to genetic differences, since map organizations in individual mutant animals often differ between colliculi. Disruption of spontaneous waves of retinal activity resulted in uniform map organization in Isl2EphA3/+ mice, demonstrating that correlated spontaneous activity is required for map heterogeneity. Computational modeling replicates this heterogeneity, revealing that molecular- and activity-dependent forces interact simultaneously and stochastically during topographic map formation. PMID:26402608

  20. Image mosaic and topographic map of the moon

    USGS Publications Warehouse

    Hare, Trent M.; Hayward, Rosalyn K.; Blue, Jennifer S.; Archinal, Brent A.

    2015-01-01

    Sheet 2: This map is based on data from the Lunar Orbiter Laser Altimeter (LOLA; Smith and others, 2010), an instrument on the National Aeronautics and Space Administration (NASA) Lunar Reconnaissance Orbiter (LRO) spacecraft (Tooley and others, 2010). The image used for the base of this map represents more than 6.5 billion measurements gathered between July 2009 and July 2013, adjusted for consistency in the coordinate system described below, and then converted to lunar radii (Mazarico and others, 2012). For the Mercator portion, these measurements were converted into a digital elevation model (DEM) with a resolution of 0.015625 degrees per pixel, or 64 pixels per degree. In projection, the pixels are 473.8 m in size at the equator. For the polar portion, the LOLA elevation points were used to create a DEM at 240 meters per pixel. A shaded relief map was generated from each DEM with a sun angle of 45° from horizontal, and a sun azimuth of 270°, as measured clockwise from north with no vertical exaggeration. The DEM values were then mapped to a global color look-up table, with each color representing a range of 1 km of elevation. For this map sheet, only larger feature names are shown. For references listed above, please open the full PDF.

  1. Ultrahigh resolution optical coherence tomography for quantitative topographic mapping of retinal and intraretinal architectural morphology

    NASA Astrophysics Data System (ADS)

    Ko, Tony H.; Hartl, Ingmar; Drexler, Wolfgang; Ghanta, Ravi K.; Fujimoto, James G.

    2002-06-01

    Quantitative, three-dimensional mapping of retinal architectural morphology was achieved using an ultrahigh resolution ophthalmic OCT system. This OCT system utilizes a broad bandwidth titanium-sapphire laser light source generating bandwidths of up to 300 nm near 800 nm center wavelength. The system enables real-time cross-sectional imaging of the retina with ~3 micrometers axial resolution. The macula and the papillomacular axis of a normal human subject were systematically mapped using a series of linear scans. Edge detection and segmentation algorithms were developed to quantify retinal and intraretinal thicknesses. Topographic mapping of the total retinal thickness and the total ganglion cell/inner plexiform layer thickness was achieved around the macula. A topographic mapping quantifying the progressive thickening of the nerve fiber layer (NFL) nasally approaching the optic disk was also demonstrated. The ability to create three-dimensional topographic mapping of retinal architectural morphology at ~3 micrometers axial resolution will be relevant for the diagnosis of many retinal diseases. The topographic quantification of these structures can serve as a powerful tool for developing algorithms and clinical scanning protocols for the screening and staging of ophthalmic diseases such as glaucoma.

  2. Can Selforganizing Maps Accurately Predict Photometric Redshifts?

    NASA Technical Reports Server (NTRS)

    Way, Michael J.; Klose, Christian

    2012-01-01

    We present an unsupervised machine-learning approach that can be employed for estimating photometric redshifts. The proposed method is based on a vector quantization called the self-organizing-map (SOM) approach. A variety of photometrically derived input values were utilized from the Sloan Digital Sky Survey's main galaxy sample, luminous red galaxy, and quasar samples, along with the PHAT0 data set from the Photo-z Accuracy Testing project. Regression results obtained with this new approach were evaluated in terms of root-mean-square error (RMSE) to estimate the accuracy of the photometric redshift estimates. The results demonstrate competitive RMSE and outlier percentages when compared with several other popular approaches, such as artificial neural networks and Gaussian process regression. SOM RMSE results (using delta(z) = z(sub phot) - z(sub spec)) are 0.023 for the main galaxy sample, 0.027 for the luminous red galaxy sample, 0.418 for quasars, and 0.022 for PHAT0 synthetic data. The results demonstrate that there are nonunique solutions for estimating SOM RMSEs. Further research is needed in order to find more robust estimation techniques using SOMs, but the results herein are a positive indication of their capabilities when compared with other well-known methods

  3. Topographic Map and Compass Use. A Teaching Packet to Supplement the Student Manual.

    ERIC Educational Resources Information Center

    Taylor, Michael

    This teacher's manual is designed to supplement the student manual for a unit of study on topographic map and compass use. The beginning section of the manual discusses (1) teaching strategy and evaluation, (2) teaching time and facilities, (3) materials and equipment required, (4) suggested field experience, (5) setting up a compass competition,…

  4. A molecular mechanism for the topographic alignment of convergent neural maps

    PubMed Central

    Savier, Elise; Eglen, Stephen J; Bathélémy, Amélie; Perraut, Martine; Pfrieger, Frank W; Lemke, Greg; Reber, Michael

    2017-01-01

    Sensory processing requires proper alignment of neural maps throughout the brain. In the superficial layers of the superior colliculus of the midbrain, converging projections from retinal ganglion cells and neurons in visual cortex must be aligned to form a visuotopic map, but the basic mechanisms mediating this alignment remain elusive. In a new mouse model, ectopic expression of ephrin-A3 (Efna3) in a subset of retinal ganglion cells, quantitatively altering the retinal EFNAs gradient, disrupts cortico-collicular map alignment onto the retino-collicular map, creating a visuotopic mismatch. Genetic inactivation of ectopic EFNA3 restores a wild-type cortico-collicular map. Theoretical analyses using a new mapping algorithm model both map formation and alignment, and recapitulate our experimental observations. The algorithm is based on an initial sensory map, the retino-collicular map, which carries intrinsic topographic information, the retinal EFNAs, to the superior colliculus. These EFNAs subsequently topographically align ingrowing visual cortical axons to the retino-collicular map. DOI: http://dx.doi.org/10.7554/eLife.20470.001 PMID:28322188

  5. Fixed-Wing Micro Aerial Vehicle for Accurate Corridor Mapping

    NASA Astrophysics Data System (ADS)

    Rehak, M.; Skaloud, J.

    2015-08-01

    In this study we present a Micro Aerial Vehicle (MAV) equipped with precise position and attitude sensors that together with a pre-calibrated camera enables accurate corridor mapping. The design of the platform is based on widely available model components to which we integrate an open-source autopilot, customized mass-market camera and navigation sensors. We adapt the concepts of system calibration from larger mapping platforms to MAV and evaluate them practically for their achievable accuracy. We present case studies for accurate mapping without ground control points: first for a block configuration, later for a narrow corridor. We evaluate the mapping accuracy with respect to checkpoints and digital terrain model. We show that while it is possible to achieve pixel (3-5 cm) mapping accuracy in both cases, precise aerial position control is sufficient for block configuration, the precise position and attitude control is required for corridor mapping.

  6. Short-term synaptic plasticity across topographic maps in the electrosensory system.

    PubMed

    Mileva, G R; Kozak, I J; Lewis, J E

    2016-03-24

    The early pathways underlying the active electric sense of the weakly electric fish Apteronotus leptorhynchus involve three parallel processing streams. An array of tuberous electroreceptors distributed over the skin provides inputs to the electrosensory lateral line lobe (ELL), forming the basis for three topographic maps: LS (lateral segment), CLS (centrolateral segment), and CMS (centromedial segment). In addition, each map receives topographically preserved inputs from a direct feedback pathway. How this feedback contributes to the distinct spatiotemporal filtering properties of ELL pyramidal neurons across maps is not clear. We used an in vitro approach to characterize short-term plasticity (STP) in the direct feedback synapses onto pyramidal neurons in each map. Our findings indicated that the dynamics of STP varied across maps in a manner that was consistent with the temporal filtering properties of pyramidal neurons in vivo. Using a modeling approach, we found that the STP of direct feedback synapses in CMS was best described by a simple facilitation-depression model. On the other hand, STP in LS was best described by synaptic facilitation with a use-dependent recovery rate. These results suggest that differential regulation of overlapping STP processes in feedback pathways can contribute to the functional specialization of topographic sensory maps.

  7. Sperry versus Hebb: Topographic mapping in Isl2/EphA3 mutant mice

    PubMed Central

    2010-01-01

    Background In wild-type mice, axons of retinal ganglion cells establish topographically precise projection to the superior colliculus of the midbrain. This means that axons of neighboring retinal ganglion cells project to the proximal locations in the target. The precision of topographic projection is a result of combined effects of molecular labels, such as Eph receptors and ephrins, and correlated neural activity. In the Isl2/EphA3 mutant mice the expression levels of molecular labels are changed. As a result the topographic projection is rewired so that the neighborhood relationships between retinal cell axons are disrupted. Results Here we study the computational model for retinocollicular connectivity formation that combines the effects of molecular labels and correlated neural activity. We argue that the effects of correlated activity presenting themselves in the form of Hebbian learning rules can facilitate the restoration of the topographic connectivity even when the molecular labels carry conflicting instructions. This occurs because the correlations in electric activity carry information about retinal cells' origin that is independent on molecular labels. We argue therefore that partial restoration of the topographic property of the retinocollicular projection observed in Isl2/EphA3 heterozygous knockin mice may be explained by the effects of correlated neural activity. We address the maps observed in Isl2/EphA3 knockin/EphA4 knockout mice in which the levels of retinal labels are uniformly reduced. These maps can be explained by either the saturation of EphA receptor mapping leading to the relative signaling model or by the reverse signaling conveyed by ephrin-As expressed by retinal axons. Conclusion According to our model, experiments in Isl2/EphA3 knock-in mice test the interactions between effects of molecular labels and correlated activity during the development of neural connectivity. Correlated activity can partially restore topographic order even

  8. Geologic and topographic maps of the Kabul South 30' x 60' quadrangle, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2010-01-01

    This report consists of two map sheets, this pamphlet, and a collection of database files. Sheet 1 is the geologic map with three highly speculative cross sections, and sheet 2 is a topographic map that comprises all the support data for the geologic map. Both maps (sheets 1 and 2) are produced at 1:100,000-scale and are provided in Geospatial PDF format that preserves the georegistration and original layering. The database files include images of the topographic hillshade (shaded relief) and color-topography files used to create the topographic maps, a copy of the Landsat image, and a gray-scale basemap. Vector data from each of the layers that comprise both maps are provided in the form of Arc/INFO shapefiles. Most of the geologic interpretations and all of the topographic data were derived exclusively from images. A variety of image types were used, and each image type corresponds to a unique view of the geology. The geologic interpretations presented here are the result of comparing and contrasting between the various images and making the best uses of the strengths of each image type. A limited amount of fieldwork, in the spring of 2004 and the fall of 2006, was carried out within the quadrangle, but all the war-related dangers present in Afghanistan restricted its scope, duration, and utility. The maps that are included in this report represent works-in-progress in that they are simply intended to be the best possible product for the time available and conditions that exist during the early phases of reconstruction in Afghanistan. This report has been funded by the United States Agency for International Development (USAID) as a part of several broader programs that USAID designed to stimulate growth in the energy and mineral sectors of the Afghan economy. The main objective is to provide maps that will be used by scientists of the Afghan Ministry of Mines, the Afghanistan Geological Survey, and the Afghan Geodesy and Cartography Head Office in their efforts

  9. Geologic and Topographic Maps of the Kabul North 30' x 60' Quadrangle, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2010-01-01

    This report consists of two map sheets, this pamphlet, and a collection of database files. Sheet 1 is the geologic map with two highly speculative cross sections, and sheet 2 is a topographic map that comprises all the support data for the geologic map. Both maps (sheets 1 and 2) are produced at 1:100,000-scale and are provided in GeoPDF format that preserves the georegistration and original layering. The database files include images of the topographic hillshade (shaded relief) and color-topography files used to create the topographic maps, a copy of the Landsat image, and a gray-scale basemap. Vector data from each of the layers that comprise both maps are provided in the form of Arc/INFO shapefiles. Most of the geologic interpretations and all of the topographic data were derived exclusively from images. A variety of image types were used, and each image type corresponds to a unique view of the geology. The geologic interpretations presented here are the result of comparing and contrasting between the various images and making the best uses of the strengths of each image type. A limited amount of fieldwork, in the spring of 2004 and the fall of 2006, was carried out within the quadrangle, but all the war-related dangers present in Afghanistan restricted its scope, duration, and utility. The maps that are included in this report represent works-in-progress in that they are simply intended to be the best possible product for the time available and conditions that exist during the early phases of reconstruction in Afghanistan. This report has been funded by the United States Agency for International Development (USAID) as a part of several broader programs that USAID designed to stimulate growth in the energy and mineral sectors of the Afghan economy. The main objective is to provide maps that will be used by scientists of the Afghan Ministry of Mines, the Afghanistan Geological Survey, and the Afghan Geodesy and Cartography Head Office in their efforts to rebuild

  10. Grids in Topographic Maps Reduce Distortions in the Recall of Learned Object Locations

    PubMed Central

    Edler, Dennis; Bestgen, Anne-Kathrin; Kuchinke, Lars; Dickmann, Frank

    2014-01-01

    To date, it has been shown that cognitive map representations based on cartographic visualisations are systematically distorted. The grid is a traditional element of map graphics that has rarely been considered in research on perception-based spatial distortions. Grids do not only support the map reader in finding coordinates or locations of objects, they also provide a systematic structure for clustering visual map information (“spatial chunks”). The aim of this study was to examine whether different cartographic kinds of grids reduce spatial distortions and improve recall memory for object locations. Recall performance was measured as both the percentage of correctly recalled objects (hit rate) and the mean distance errors of correctly recalled objects (spatial accuracy). Different kinds of grids (continuous lines, dashed lines, crosses) were applied to topographic maps. These maps were also varied in their type of characteristic areas (LANDSCAPE) and different information layer compositions (DENSITY) to examine the effects of map complexity. The study involving 144 participants shows that all experimental cartographic factors (GRID, LANDSCAPE, DENSITY) improve recall performance and spatial accuracy of learned object locations. Overlaying a topographic map with a grid significantly reduces the mean distance errors of correctly recalled map objects. The paper includes a discussion of a square grid's usefulness concerning object location memory, independent of whether the grid is clearly visible (continuous or dashed lines) or only indicated by crosses. PMID:24869486

  11. Probabilistic topographic maps from raw, full-waveform airborne LiDAR data

    NASA Astrophysics Data System (ADS)

    Jalobeanu, A.; Gonçalves, G. R.

    2011-12-01

    The main goal of the AutoProbaDTM project is to derive new methodologies to measure the topography and terrain characteristics using the latest full-waveform airborne LiDAR technology. It includes algorithmic development, implementation, and validation over a large test area. In the long run, we wish to develop techniques that are scalable and applicable to future satellite missions such as LIST (NASA Decadal Survey), to help perform efficient and accurate large-scale mapping. One of the biggest challenges is to develop fast ways to process huge volumes of raw data without compromising the accuracy and the physical consistency of the result. Over the past decades, significant progress has been made in digital elevation model (DEM) extraction and user interaction has been much reduced, however most algorithms are still supervised. Topographic surveys currently play a central role in sensor calibration and full automation is still an unsolved problem. Moreover, very few existing methods are currently able to propose a quantitative error map with the reconstructed DEM. Traditional validation and quality control only allow to check the discrepancy between the product and a set of reference points, lacking the ability to predict the actual uncertainty related to elevations at chosen locations. We plan to provide fast and automated techniques to derive topographic maps and to compute error maps as well, based on a probabilistic approach to modeling terrains and data acquisition, solving inverse problems and handling uncertainty. Bayesian inference provides a rigorous framework for model reconstruction and error propagation, treating all quantities as random, and combining sources of information optimally. In the future, the uncertainty maps shall help scientists put error bars on quantities derived from the models. In June 2011, 200 km2 of data were acquired (100 GB of binary files, half a billion waveforms) in central Portugal, over an area of geomorphological and

  12. Mapping methods for computationally efficient and accurate structural reliability

    NASA Technical Reports Server (NTRS)

    Shiao, Michael C.; Chamis, Christos C.

    1992-01-01

    Mapping methods are developed to improve the accuracy and efficiency of probabilistic structural analyses with coarse finite element meshes. The mapping methods consist of: (1) deterministic structural analyses with fine (convergent) finite element meshes, (2) probabilistic structural analyses with coarse finite element meshes, (3) the relationship between the probabilistic structural responses from the coarse and fine finite element meshes, and (4) a probabilistic mapping. The results show that the scatter of the probabilistic structural responses and structural reliability can be accurately predicted using a coarse finite element model with proper mapping methods. Therefore, large structures can be analyzed probabilistically using finite element methods.

  13. Radar Interferometer for Topographic Mapping of Glaciers and Ice Sheets

    NASA Technical Reports Server (NTRS)

    Moller, Delwyn K.; Sadowy, Gregory A.; Rignot, Eric J.; Madsen, Soren N.

    2007-01-01

    A report discusses Ka-band (35-GHz) radar for mapping the surface topography of glaciers and ice sheets at high spatial resolution and high vertical accuracy, independent of cloud cover, with a swath-width of 70 km. The system is a single- pass, single-platform interferometric synthetic aperture radar (InSAR) with an 8-mm wavelength, which minimizes snow penetration while remaining relatively impervious to atmospheric attenuation. As exhibited by the lower frequency SRTM (Shuttle Radar Topography Mission) AirSAR and GeoSAR systems, an InSAR measures topography using two antennas separated by a baseline in the cross-track direction, to view the same region on the ground. The interferometric combination of data received allows the system to resolve the pathlength difference from the illuminated area to the antennas to a fraction of a wavelength. From the interferometric phase, the height of the target area can be estimated. This means an InSAR system is capable of providing not only the position of each image point in along-track and slant range as with a traditional SAR but also the height of that point through interferometry. Although the evolution of InSAR to a millimeter-wave center frequency maximizes the interferometric accuracy from a given baseline length, the high frequency also creates a fundamental problem of swath coverage versus signal-to-noise ratio. While the length of SAR antennas is typically fixed by mass and stowage or deployment constraints, the width is constrained by the desired illuminated swath width. As the across-track beam width which sets the swath size is proportional to the wavelength, a fixed swath size equates to a smaller antenna as the frequency is increased. This loss of antenna size reduces the two-way antenna gain to the second power, drastically reducing the signal-to-noise ratio of the SAR system. This fundamental constraint of high-frequency SAR systems is addressed by applying digital beam-forming (DBF) techniques to

  14. Accurate atom-mapping computation for biochemical reactions.

    PubMed

    Latendresse, Mario; Malerich, Jeremiah P; Travers, Mike; Karp, Peter D

    2012-11-26

    The complete atom mapping of a chemical reaction is a bijection of the reactant atoms to the product atoms that specifies the terminus of each reactant atom. Atom mapping of biochemical reactions is useful for many applications of systems biology, in particular for metabolic engineering where synthesizing new biochemical pathways has to take into account for the number of carbon atoms from a source compound that are conserved in the synthesis of a target compound. Rapid, accurate computation of the atom mapping(s) of a biochemical reaction remains elusive despite significant work on this topic. In particular, past researchers did not validate the accuracy of mapping algorithms. We introduce a new method for computing atom mappings called the minimum weighted edit-distance (MWED) metric. The metric is based on bond propensity to react and computes biochemically valid atom mappings for a large percentage of biochemical reactions. MWED models can be formulated efficiently as Mixed-Integer Linear Programs (MILPs). We have demonstrated this approach on 7501 reactions of the MetaCyc database for which 87% of the models could be solved in less than 10 s. For 2.1% of the reactions, we found multiple optimal atom mappings. We show that the error rate is 0.9% (22 reactions) by comparing these atom mappings to 2446 atom mappings of the manually curated Kyoto Encyclopedia of Genes and Genomes (KEGG) RPAIR database. To our knowledge, our computational atom-mapping approach is the most accurate and among the fastest published to date. The atom-mapping data will be available in the MetaCyc database later in 2012; the atom-mapping software will be available within the Pathway Tools software later in 2012.

  15. The Topographic Mapping Flash Lidar for micro-topography of river systems

    NASA Astrophysics Data System (ADS)

    Donley, B.; Ramond, T.; Weimer, C. S.; Ruppert, L.; Delker, T.; Applegate, J.

    2010-12-01

    The Topographic Mapping Flash Lidar (TMFL) instrument built by Ball Aerospace is a pushbroom lidar operating at 1064nm that provides the ability to map the topographic structure of river beds and surrounding terrain. The receiver is a pixilated array, allowing small-scale resolution of micro-topography that is critical to understanding river dynamics and the biodiversity of the area. The instrument uses no mechanical scanning, which is a key feature allowing the design to be applicable to space flight like the NASA Decadal Survey mission LIST. The TMFL instrument has been flown on a Twin Otter aircraft. This poster will exhibit examples of river topography over dry and wet riverbeds. Examples are given of imaging a river even when partially obscured under trees in an area of high canopy density.

  16. Topographic Science

    USGS Publications Warehouse

    Poppenga, Sandra; Evans, Gayla; Gesch, Dean; Stoker, Jason M.; Queija, Vivian R.; Worstell, Bruce; Tyler, Dean J.; Danielson, Jeff; Bliss, Norman; Greenlee, Susan

    2010-01-01

    The mission of U.S. Geological Survey (USGS) Earth Resources Observation and Science (EROS) Center Topographic Science is to establish partnerships and conduct research and applications that facilitate the development and use of integrated national and global topographic datasets. Topographic Science includes a wide range of research and applications that result in improved seamless topographic datasets, advanced elevation technology, data integration and terrain visualization, new and improved elevation derivatives, and development of Web-based tools. In cooperation with our partners, Topographic Science is developing integrated-science applications for mapping, national natural resource initiatives, hazards, and global change science. http://topotools.cr.usgs.gov/.

  17. Converting Topographic Maps into Digital Form to Aid in Archeological Research in the Peten, Guatemala

    NASA Technical Reports Server (NTRS)

    Aldrich, Serena R.

    1999-01-01

    The purpose of my project was to convert a topographical map into digital form so that the data can be manipulated and easily accessed in the field. With the data in this particular format, Dr. Sever and his colleagues can highlight the specific features of the landscape that they require for their research of the ancient Mayan civilization. Digital elevation models (DEMs) can also be created from the digitized contour features adding another dimension to their research.

  18. EMPLOYING TOPOGRAPHICAL HEIGHT MAP IN COLONIC POLYP MEASUREMENT AND FALSE POSITIVE REDUCTION

    PubMed Central

    Yao, Jianhua; Li, Jiang; Summers, Ronald M.

    2008-01-01

    CT Colonography (CTC) is an emerging minimally invasive technique for screening and diagnosing colon cancers. Computer Aided Detection (CAD) techniques can increase sensitivity and reduce false positives. Inspired by the way radiologists detect polyps via 3D virtual fly-through in CTC, we borrowed the idea from geographic information systems to employ topographical height map in colonic polyp measurement and false positive reduction. After a curvature based filtering and a 3D CT feature classifier, a height map is computed for each detection using a ray-casting algorithm. We design a concentric index to characterize the concentric pattern in polyp height map based on the fact that polyps are protrusions from the colon wall and round in shape. The height map is optimized through a multi-scale spiral spherical search to maximize the concentric index. We derive several topographic features from the map and compute texture features based on wavelet decomposition. We then send the features to a committee of support vector machines for classification. We have trained our method on 394 patients (71 polyps) and tested it on 792 patients (226 polyps). Results showed that we can achieve 95% sensitivity at 2.4 false positives per patient and the height map features can reduce false positives by more than 50%. We compute the polyp height and width measurements and correlate them with manual measurements. The Pearson correlations are 0.74 (p=0.11) and 0.75 (p=0.17) for height and width, respectively. PMID:19578483

  19. Study on High Accuracy Topographic Mapping via UAV-based Images

    NASA Astrophysics Data System (ADS)

    Chi, Yun-Yao; Lee, Ya-Fen; Tsai, Shang-En

    2016-10-01

    Unmanned aerial vehicle (UAV) provides a promising tool for the acquisition of such multi-temporal aerial stereo photos and high-resolution digital surface models. Recently, the flight of UAVs operates with high degrees of autonomy by the global position system and onboard digit camera and computer. The UAV-based mapping can be obtained faster and cheaper, but its accuracy is anxious. This paper aims to identify the integration ability of high accuracy topographic map via the image of quad-rotors UAV and ground control points (GCPs). The living survey data is collected in the Errn river basins area in Tainan, Taiwan. The high accuracy UAV-based topographic in the study area is calibrated by the local coordinate of GCPs using the total station with the accuracy less than 1/2000. The comparison results show the accuracy of UAV-based topographic is accepted by overlapping. The results can be a reference for the practice works of mapping survey in earth.

  20. Determination of important topographic factors for landslide mapping analysis using MLP network.

    PubMed

    Alkhasawneh, Mutasem Sh; Ngah, Umi Kalthum; Tay, Lea Tien; Mat Isa, Nor Ashidi; Al-batah, Mohammad Subhi

    2013-01-01

    Landslide is one of the natural disasters that occur in Malaysia. Topographic factors such as elevation, slope angle, slope aspect, general curvature, plan curvature, and profile curvature are considered as the main causes of landslides. In order to determine the dominant topographic factors in landslide mapping analysis, a study was conducted and presented in this paper. There are three main stages involved in this study. The first stage is the extraction of extra topographic factors. Previous landslide studies had identified mainly six topographic factors. Seven new additional factors have been proposed in this study. They are longitude curvature, tangential curvature, cross section curvature, surface area, diagonal line length, surface roughness, and rugosity. The second stage is the specification of the weight of each factor using two methods. The methods are multilayer perceptron (MLP) network classification accuracy and Zhou's algorithm. At the third stage, the factors with higher weights were used to improve the MLP performance. Out of the thirteen factors, eight factors were considered as important factors, which are surface area, longitude curvature, diagonal length, slope angle, elevation, slope aspect, rugosity, and profile curvature. The classification accuracy of multilayer perceptron neural network has increased by 3% after the elimination of five less important factors.

  1. Lunar Topographic Mapping Using a New High Resolution Mode for the GSSR Radar

    NASA Technical Reports Server (NTRS)

    Hensley, Scott; Gurrola, Eric; Slade, Martin; Quirk, Kevin; Srinivasan, Meera; Lee, Clement; Yun, Sang-Ho; Jao, Joseph; Wilson, Barbara; De Jong, Eric; Marechal, Nick; Weintraub, Lawrence; Dickinson, Richard; Bloom, Ronald; Karamyan, Grant; Lilje, Anneliese; Harcke, Leif

    2010-01-01

    Mapping the Moon's topography using Earth based radar interferometric measurements by the Goldstone Solar System Radar (GSSR) has been done several times since the mid 1990s. In 2008 we reported at this conference the generation of lunar topographic maps having approximately 4 m height accuracy at a horizontal posting of 40 m. Since then GSSR radar has been improved to allow 40 MHz bandwidth imaging and consequently obtained images and interferograms with a resolution of about 4 m in range by 5 m in azimuth. The long synthetic aperture times of approximately 90 minutes in duration necessitated a migration from range/Doppler image formation techniques to spotlight mode processing and autofocusing methods. The improved resolution imagery should permit the generation of topographic maps with a factor of two better spatial resolution with about same height accuracy. Coupled the with the recent availability of new lidar topography maps of the lunar surface made by orbiting satellites of Japan and the United States the geodetic control of the radar generated maps products can be improved dramatically. This paper will discuss the hardware and software improvements made to the GSSR and present some of the new high resolution products.

  2. Developing Vs30 site-condition maps by combining observations with geologic and topographic constraints

    USGS Publications Warehouse

    Thompson, E.M.; Wald, D.J.

    2012-01-01

    Despite obvious limitations as a proxy for site amplification, the use of time-averaged shear-wave velocity over the top 30 m (VS30) remains widely practiced, most notably through its use as an explanatory variable in ground motion prediction equations (and thus hazard maps and ShakeMaps, among other applications). As such, we are developing an improved strategy for producing VS30 maps given the common observational constraints. Using the abundant VS30 measurements in Taiwan, we compare alternative mapping methods that combine topographic slope, surface geology, and spatial correlation structure. The different VS30 mapping algorithms are distinguished by the way that slope and geology are combined to define a spatial model of VS30. We consider the globally applicable slope-only model as a baseline to which we compare two methods of combining both slope and geology. For both hybrid approaches, we model spatial correlation structure of the residuals using the kriging-with-a-trend technique, which brings the map into closer agreement with the observations. Cross validation indicates that we can reduce the uncertainty of the VS30 map by up to 16% relative to the slope-only approach.

  3. Topographic mapping data semantics through data conversion and enhancement: Chapter 7

    USGS Publications Warehouse

    Varanka, Dalia; Carter, Jonathan; Usery, E. Lynn; Shoberg, Thomas; Edited by Ashish, Naveen; Sheth, Amit P.

    2011-01-01

    This paper presents research on the semantics of topographic data for triples and ontologies to blend the capabilities of the Semantic Web and The National Map of the U.S. Geological Survey. Automated conversion of relational topographic data of several geographic sample areas to the triple data model standard resulted in relatively poor semantic associations. Further research employed vocabularies of feature type and spatial relation terms. A user interface was designed to model the capture of non-standard terms relevant to public users and to map those terms to existing data models of The National Map through the use of ontology. Server access for the study area triple stores was made publicly available, illustrating how the development of linked data may transform institutional policies to open government data resources to the public. This paper presents these data conversion and research techniques that were tested as open linked data concepts leveraged through a user-centered interface and open USGS server access to the public.

  4. The study of the wonderful: the first topographical mapping of vision in the brain.

    PubMed

    Fishman, Ronald S

    2008-12-01

    The conception by René Descartes of the human brain, notorious as it is for placing the soul or mind in the pineal gland, had yet within it the basic idea of the brain as a highly organized mechanism with topographical sensory mapping and different functions localized in specific areas. Descartes was directly led to this idea by his appreciation of what the retinal image conceived by Johannes Kepler implied, not only for the nature of vision, but for the operation of the brain in general. The linkage between Kepler and Descartes is not widely appreciated but is one of the best examples of synergism in the history of science.

  5. Current State of Topographic Mapping of Ganymede: Squeezing the Most from JUICE

    NASA Astrophysics Data System (ADS)

    Schenk, P.; McKinnon, W. B.; Singer, K. N.; Moore, J. M.

    2014-12-01

    JUICE, ESA's planned Ganymede orbiter, and NASA's proposed Europa Clipper, won't arrive for some time, and many issues concerning Ganymede's geologic history and evolution remain. Topographic mapping will be a key component of JUICE orbital and Clipper flyby mapping and an understanding of Ganymede topography can also help guide instrument development. Topographic data for Ganymede are based almost entirely on Voyager and Galileo image analysis and are sparse. No more than 20% of the surface (which exceeds that of Mercury in area in total) is presently mappable. Both stereo (3D) and shape-from-shading (PC) are both possible (and nearly all possible DEM combinations have now been constructed). Unlike Europa, only an handful of sites are mappable using both techniques: these being mostly over the South Polar region with Voyager 2. Without stereo control, PC topography, while very useful, must be interpreted with caution. Only a handful of targeted stereo mosaics were possible from Galileo, but serendipitous Voyager-Galileo stereo greatly expands this data set. Topographic data allow determinations of RMS slope values for each terrain type, but currently only at length scales >100 m. Topographic amplitude can also be determined. Geologic units for which we have limited DEM data include: furrows, grooves, smooth and subdued grooved terrains, calderas, pit and dome craters, penepalimpsests, and palimpsests. Key science questions that can be guided by even the limited available topography include: relative elevations of smooth, grooved and dark terrains and the role of volcanic vs. tectonic resurfacing; relief of ancient degraded impact craters and the role of density and heat variations; density anomalies within or beneath the ice shell; the severity and history of thermal relaxation globally and the associated heat pulse. Here we focus on the issue of relaxation, where topographic evidence indicates that thermal relaxation reached a peak associated with bright terrain

  6. Topographic Map of Quadrangle 3262, Farah (421) and Hokumat-E-Pur-Chaman (422) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  7. Topographic Map of Quadrangle 3162, Chakhansur (603) and Kotalak (604) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  8. Topographic Map of Quadrangle 3568, Polekhomri (503) and Charikar (504) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  9. Topographic Map of Quadrangle 3362, Shin-Dand (415) and Tulak (416) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  10. Topographic Map of Quadrangle 3366, Gizab (513) and Nawer (514) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  11. Topographic Map of Quadrangle 3364, Pasa-Band (417) and Kejran (418) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  12. Topographic Map of Quadrangle 3266, Ourzgan (519) and Moqur (520) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  13. Topographic Map of Quadrangle 3166, Jaldak (701) and Maruf-Nawa (702) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  14. Topographic Map of Quadrangle 3464, Shahrak (411) and Kasi (412) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  15. Topographic Map of Quadrangle 3468, Chak Wardak Syahgerd (509) and Kabul (510) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  16. Topographic Map of Quadrangle 3564, Chahriaq (Joand) (405) and Gurziwan (406) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  17. Topographic Map of Quadrangle 3164, Lashkargah (605) and Kandahar (606) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  18. Topographic Map of Quadrangle 3462, Herat (409) and Chesht-Sharif (410) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  19. Topographic Map of Quadrangle 3264, Nawzad-Musa-Qala (423) and Dehrawat (424) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  20. Topographic Map of Quadrangle 3466, Lal-Sarjangal (507) and Bamyan (508) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  1. Topographic Map of Quadrangle 3670, Jam-Kashem (223) and Zebak (224) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  2. Analysis of local and global topographic order in mouse retinocollicular maps.

    PubMed

    Willshaw, David J; Sterratt, David C; Teriakidis, Adrianna

    2014-01-29

    We introduce the Lattice Method for the quantitative assessment of the topographic order within the pattern of connections between two structures. We apply this method to published visuocollicular mapping data obtained by Fourier-based intrinsic imaging of mouse colliculus. We find that, in maps from wild types and β2 knock-outs, at least 150 points on the colliculus are represented in the visual field in the correct relative order. In maps from animals with knock-out of the three ephrinA ligands (TKO), thought to specify the rostrocaudal axis of the map, the projection on the colliculus of each small circular area of visual field is elongated approximately rostrocaudally. Of these projections, 9% are made up of two distinct regions lying along the direction of ingrowth of retinal fibers. These are similar to the ectopic projections found in other ephrinA knock-out data. Coexisting with the ectopic projections, each TKO map contains a submap where neighbor-neighbor relations are preserved, which is ordered along both rostrocaudal and mediolateral axes, in the orientation found in wild-type maps. The submaps vary in size with order well above chance level, which can approach the order in wild-type maps. Knock-out of both β2 and two of the three ephrinAs yields maps with some order. The ordered TKO maps cannot be produced by correlated neural activity acting alone, as this mechanism is unable to specify map orientation. These results invite reassessment of the role of molecular signaling, particularly that of ephrinAs, in the formation of ordered nerve connections.

  3. Creation of next generation U.S. Geological Survey topographic maps

    USGS Publications Warehouse

    Craun, Kari J.

    2010-01-01

    The U.S. Geological Survey (USGS) is 2 years into a 3-year cycle to create new digital topographic map products for the conterminous United States from data acquired and maintained as part of The National Map databases. These products are in the traditional, USGS topographic quadrangle, 7.5-minute (latitude and longitude) cell format. The 3-year cycle was conceived to follow the acquisition of National Aerial Imagery Program (NAIP) orthorectified imagery, a key layer in the new product. In fiscal year (FY) 2009 (ending September 30, 2009), the first year of the 3-year cycle, the USGS produced 13,200 products. These initial products of the “Digital MapBeta” series had limited feature content, including only the NAIP image, some roads, geographic names, and grid and collar information. The products were created in layered georegistered Portable Document Format (PDF) files, allowing users with freely available Adobe® Reader® software to view, print, and perform simple Geographic Information System-like functions. In FY 2010 (ending September 30, 2010), the USGS produced 20,380 products. These products of the “US Topo” series added hydrography (surface water features), contours, and some boundaries. In FY 2011 (ending September 30, 2011), the USGS will complete the initial coverage with US Topo products and will add additional feature content to the maps. The design, development, and production associated with the US Topo products provide management and technical challenges for the USGS and its public and private sector partners. One challenge is the acquisition and maintenance of nationally consistent base map data from multiple sources. Another is the use of these data to create a consistent, current series of cartographic products that can be used by the broad spectrum of traditional topographic map users. Although the USGS and its partners have overcome many of these challenges, many, such as establishing and funding a sustainable base data

  4. Influence of pansharpening techniques in obtaining accurate vegetation thematic maps

    NASA Astrophysics Data System (ADS)

    Ibarrola-Ulzurrun, Edurne; Gonzalo-Martin, Consuelo; Marcello-Ruiz, Javier

    2016-10-01

    In last decades, there have been a decline in natural resources, becoming important to develop reliable methodologies for their management. The appearance of very high resolution sensors has offered a practical and cost-effective means for a good environmental management. In this context, improvements are needed for obtaining higher quality of the information available in order to get reliable classified images. Thus, pansharpening enhances the spatial resolution of the multispectral band by incorporating information from the panchromatic image. The main goal in the study is to implement pixel and object-based classification techniques applied to the fused imagery using different pansharpening algorithms and the evaluation of thematic maps generated that serve to obtain accurate information for the conservation of natural resources. A vulnerable heterogenic ecosystem from Canary Islands (Spain) was chosen, Teide National Park, and Worldview-2 high resolution imagery was employed. The classes considered of interest were set by the National Park conservation managers. 7 pansharpening techniques (GS, FIHS, HCS, MTF based, Wavelet `à trous' and Weighted Wavelet `à trous' through Fractal Dimension Maps) were chosen in order to improve the data quality with the goal to analyze the vegetation classes. Next, different classification algorithms were applied at pixel-based and object-based approach, moreover, an accuracy assessment of the different thematic maps obtained were performed. The highest classification accuracy was obtained applying Support Vector Machine classifier at object-based approach in the Weighted Wavelet `à trous' through Fractal Dimension Maps fused image. Finally, highlight the difficulty of the classification in Teide ecosystem due to the heterogeneity and the small size of the species. Thus, it is important to obtain accurate thematic maps for further studies in the management and conservation of natural resources.

  5. High-resolution multibeam mapping and submersible surveys of topographic features in the northwestern Gulf of Mexico

    USGS Publications Warehouse

    Hickerson, E.L.; Schmahl, G.P.; Weaver, D.C.; Gardner, J.V.

    2003-01-01

    The Flower Garden Banks National Marine Sanctuary (FGBNMS) and the USGS Pacific Seafloor Mapping Project mapped about 2000 km2 of the northwestern Gulf of Mexico continental shelf during June 2002, using a Kongsberg Simrad EM1000 multibeam echosounder. Mapping focused on select topographic highs thave hae been idetnnfied as biological features warranting protection from oil and gas activities by the Minerals Management Service (MMS). The base maps will be used for all future ROV and submersible missions.

  6. A VS30 map for California with geologic and topographic constraints

    USGS Publications Warehouse

    Thompson, Eric; Wald, David J.; Worden, Charles

    2014-01-01

    For many earthquake engineering applications, site response is estimated through empirical correlations with the time‐averaged shear‐wave velocity to 30 m depth (VS30). These applications therefore depend on the availability of either site‐specific VS30 measurements or VS30 maps at local, regional, and global scales. Because VS30 measurements are sparse, a proxy frequently is needed to estimate VS30 at unsampled locations. We present a new VS30 map for California, which accounts for observational constraints from multiple sources and spatial scales, such as geology, topography, and site‐specific VS30measurements. We apply the geostatistical approach of regression kriging (RK) to combine these constraints for predicting VS30. For the VS30 trend, we start with geology‐based VS30 values and identify two distinct trends between topographic gradient and the residuals from the geology VS30 model. One trend applies to deep and fine Quaternary alluvium, whereas the second trend is slightly stronger and applies to Pleistocene sedimentary units. The RK framework ensures that the resulting map of California is locally refined to reflect the rapidly expanding database of VS30 measurements throughout California. We compare the accuracy of the new mapping method to a previously developed map of VS30 for California. We also illustrate the sensitivity of ground motions to the new VS30 map by comparing real and scenario ShakeMaps with VS30 values from our new map to those for existingVS30 maps.

  7. Modeling epileptic brain states using EEG spectral analysis and topographic mapping.

    PubMed

    Direito, Bruno; Teixeira, César; Ribeiro, Bernardete; Castelo-Branco, Miguel; Sales, Francisco; Dourado, António

    2012-09-30

    Changes in the spatio-temporal behavior of the brain electrical activity are believed to be associated to epileptic brain states. We propose a novel methodology to identify the different states of the epileptic brain, based on the topographic mapping of the time varying relative power of delta, theta, alpha, beta and gamma frequency sub-bands, estimated from EEG. Using normalized-cuts segmentation algorithm, points of interest are identified in the topographic mappings and their trajectories over time are used for finding out relations with epileptogenic propagations in the brain. These trajectories are used to train a Hidden Markov Model (HMM), which models the different epileptic brain states and the transition among them. Applied to 10 patients suffering from focal seizures, with a total of 30 seizures over 497.3h of data, the methodology shows good results (an average point-by-point accuracy of 89.31%) for the identification of the four brain states--interictal, preictal, ictal and postictal. The results suggest that the spatio-temporal dynamics captured by the proposed methodology are related to the epileptic brain states and transitions involved in focal seizures.

  8. Bioclimatic and vegetation mapping of a topographically complex oceanic island applying different interpolation techniques

    NASA Astrophysics Data System (ADS)

    Garzón-Machado, Víctor; Otto, Rüdiger; del Arco Aguilar, Marcelino José

    2014-07-01

    Different spatial interpolation techniques have been applied to construct objective bioclimatic maps of La Palma, Canary Islands. Interpolation of climatic data on this topographically complex island with strong elevation and climatic gradients represents a challenge. Furthermore, meteorological stations are not evenly distributed over the island, with few stations at high elevations. We carried out spatial interpolations of the compensated thermicity index (Itc) and the annual ombrothermic Index (Io), in order to obtain appropriate bioclimatic maps by using automatic interpolation procedures, and to establish their relation to potential vegetation units for constructing a climatophilous potential natural vegetation map (CPNV). For this purpose, we used five interpolation techniques implemented in a GIS: inverse distance weighting (IDW), ordinary kriging (OK), ordinary cokriging (OCK), multiple linear regression (MLR) and MLR followed by ordinary kriging of the regression residuals. Two topographic variables (elevation and aspect), derived from a high-resolution digital elevation model (DEM), were included in OCK and MLR. The accuracy of the interpolation techniques was examined by the results of the error statistics of test data derived from comparison of the predicted and measured values. Best results for both bioclimatic indices were obtained with the MLR method with interpolation of the residuals showing the highest R 2 of the regression between observed and predicted values and lowest values of root mean square errors. MLR with correction of interpolated residuals is an attractive interpolation method for bioclimatic mapping on this oceanic island since it permits one to fully account for easily available geographic information but also takes into account local variation of climatic data.

  9. Bioclimatic and vegetation mapping of a topographically complex oceanic island applying different interpolation techniques.

    PubMed

    Garzón-Machado, Víctor; Otto, Rüdiger; del Arco Aguilar, Marcelino José

    2014-07-01

    Different spatial interpolation techniques have been applied to construct objective bioclimatic maps of La Palma, Canary Islands. Interpolation of climatic data on this topographically complex island with strong elevation and climatic gradients represents a challenge. Furthermore, meteorological stations are not evenly distributed over the island, with few stations at high elevations. We carried out spatial interpolations of the compensated thermicity index (Itc) and the annual ombrothermic Index (Io), in order to obtain appropriate bioclimatic maps by using automatic interpolation procedures, and to establish their relation to potential vegetation units for constructing a climatophilous potential natural vegetation map (CPNV). For this purpose, we used five interpolation techniques implemented in a GIS: inverse distance weighting (IDW), ordinary kriging (OK), ordinary cokriging (OCK), multiple linear regression (MLR) and MLR followed by ordinary kriging of the regression residuals. Two topographic variables (elevation and aspect), derived from a high-resolution digital elevation model (DEM), were included in OCK and MLR. The accuracy of the interpolation techniques was examined by the results of the error statistics of test data derived from comparison of the predicted and measured values. Best results for both bioclimatic indices were obtained with the MLR method with interpolation of the residuals showing the highest R2 of the regression between observed and predicted values and lowest values of root mean square errors. MLR with correction of interpolated residuals is an attractive interpolation method for bioclimatic mapping on this oceanic island since it permits one to fully account for easily available geographic information but also takes into account local variation of climatic data.

  10. Topographic map of the Coronae Montes region of Mars - MTM 500k -35/087E OMKTT

    USGS Publications Warehouse

    Rosiek, Mark R.; Redding, Bonnie L.; Galuszca, Donna M.

    2005-01-01

    This map is part of a series of topographic maps of areas of special scientific interest on Mars. The topography was compiled photogrammetrically using Viking Orbiter stereo image pairs. The contour interval is 250 m. Horizontal and vertical control was established using the USGS Mars Digital Image Model 2.0 (MDIM 2.0) and data from the Mars Orbiter Laser Altimeter (MOLA).

  11. The Use of Multiple Data Sources in the Process of Topographic Maps Updating

    NASA Astrophysics Data System (ADS)

    Cantemir, A.; Visan, A.; Parvulescu, N.; Dogaru, M.

    2016-06-01

    The methods used in the process of updating maps have evolved and become more complex, especially upon the development of the digital technology. At the same time, the development of technology has led to an abundance of available data that can be used in the updating process. The data sources came in a great variety of forms and formats from different acquisition sensors. Satellite images provided by certain satellite missions are now available on space agencies portals. Images stored in archives of satellite missions such us Sentinel, Landsat and other can be downloaded free of charge.The main advantages are represented by the large coverage area and rather good spatial resolution that enables the use of these images for the map updating at an appropriate scale. In our study we focused our research of these images on 1: 50.000 scale map. DEM that are globally available could represent an appropriate input for watershed delineation and stream network generation, that can be used as support for hydrography thematic layer update. If, in addition to remote sensing aerial photogrametry and LiDAR data are ussed, the accuracy of data sources is enhanced. Ortophotoimages and Digital Terrain Models are the main products that can be used for feature extraction and update. On the other side, the use of georeferenced analogical basemaps represent a significant addition to the process. Concerning the thematic maps, the classic representation of the terrain by contour lines derived from DTM, remains the best method of surfacing the earth on a map, nevertheless the correlation with other layers such as Hidrography are mandatory. In the context of the current national coverage of the Digital Terrain Model, one of the main concerns of the National Center of Cartography, through the Cartography and Photogrammetry Department, is represented by the exploitation of the available data in order to update the layers of the Topographic Reference Map 1:5000, known as TOPRO5 and at the

  12. The Status of Topographic Mapping in the World a Unggim-Isprs Project 2012-2015

    NASA Astrophysics Data System (ADS)

    Konecny, G.; Breitkopf, U.; Radtke, A.

    2016-06-01

    In December 2011, UNGGIM initiated a cooperative project with ISPRS to resume the former UN Secretariat studies on the status of topographic mapping in the world, conducted between 1968 and 1986. After the design of a questionnaire with 27 questions, the UNGGIM Secretariat sent the questionnaires to the UN member states. 115 replies were received from the 193 member states and regions thereof. Regarding the global data coverage and age, the UN questionnaire survey was supplemented by data from the Eastview database. For each of the 27 questions, an interactive viewer was programmed permitting the analysis of the results. The authoritative data coverage at the various scale ranges has greatly increased between 1986 and 2012. Now, a 30 % 1 : 25 000 map data coverage and a 75 % 1 : 50 000 map data coverage has been completed. Nevertheless, there is still an updating problem, as data for some countries is 10 to 30 years old. Private Industry, with Google, Microsoft and Navigation system providers, have undertaken huge efforts to supplement authoritative mapping. For critical areas on the globe, MGCP committed to military mapping at 1 : 50 000. ISPRS has decided to make such surveys a sustainable issue by establishing a working group.

  13. Concurrent and Accurate Short Read Mapping on Multicore Processors.

    PubMed

    Martínez, Héctor; Tárraga, Joaquín; Medina, Ignacio; Barrachina, Sergio; Castillo, Maribel; Dopazo, Joaquín; Quintana-Ortí, Enrique S

    2015-01-01

    We introduce a parallel aligner with a work-flow organization for fast and accurate mapping of RNA sequences on servers equipped with multicore processors. Our software, HPG Aligner SA (HPG Aligner SA is an open-source application. The software is available at http://www.opencb.org, exploits a suffix array to rapidly map a large fraction of the RNA fragments (reads), as well as leverages the accuracy of the Smith-Waterman algorithm to deal with conflictive reads. The aligner is enhanced with a careful strategy to detect splice junctions based on an adaptive division of RNA reads into small segments (or seeds), which are then mapped onto a number of candidate alignment locations, providing crucial information for the successful alignment of the complete reads. The experimental results on a platform with Intel multicore technology report the parallel performance of HPG Aligner SA, on RNA reads of 100-400 nucleotides, which excels in execution time/sensitivity to state-of-the-art aligners such as TopHat 2+Bowtie 2, MapSplice, and STAR.

  14. Accurate Mobile Urban Mapping via Digital Map-Based SLAM †

    PubMed Central

    Roh, Hyunchul; Jeong, Jinyong; Cho, Younggun; Kim, Ayoung

    2016-01-01

    This paper presents accurate urban map generation using digital map-based Simultaneous Localization and Mapping (SLAM). Throughout this work, our main objective is generating a 3D and lane map aiming for sub-meter accuracy. In conventional mapping approaches, achieving extremely high accuracy was performed by either (i) exploiting costly airborne sensors or (ii) surveying with a static mapping system in a stationary platform. Mobile scanning systems recently have gathered popularity but are mostly limited by the availability of the Global Positioning System (GPS). We focus on the fact that the availability of GPS and urban structures are both sporadic but complementary. By modeling both GPS and digital map data as measurements and integrating them with other sensor measurements, we leverage SLAM for an accurate mobile mapping system. Our proposed algorithm generates an efficient graph SLAM and achieves a framework running in real-time and targeting sub-meter accuracy with a mobile platform. Integrated with the SLAM framework, we implement a motion-adaptive model for the Inverse Perspective Mapping (IPM). Using motion estimation derived from SLAM, the experimental results show that the proposed approaches provide stable bird’s-eye view images, even with significant motion during the drive. Our real-time map generation framework is validated via a long-distance urban test and evaluated at randomly sampled points using Real-Time Kinematic (RTK)-GPS. PMID:27548175

  15. Accurate Mobile Urban Mapping via Digital Map-Based SLAM †.

    PubMed

    Roh, Hyunchul; Jeong, Jinyong; Cho, Younggun; Kim, Ayoung

    2016-08-18

    This paper presents accurate urban map generation using digital map-based Simultaneous Localization and Mapping (SLAM). Throughout this work, our main objective is generating a 3D and lane map aiming for sub-meter accuracy. In conventional mapping approaches, achieving extremely high accuracy was performed by either (i) exploiting costly airborne sensors or (ii) surveying with a static mapping system in a stationary platform. Mobile scanning systems recently have gathered popularity but are mostly limited by the availability of the Global Positioning System (GPS). We focus on the fact that the availability of GPS and urban structures are both sporadic but complementary. By modeling both GPS and digital map data as measurements and integrating them with other sensor measurements, we leverage SLAM for an accurate mobile mapping system. Our proposed algorithm generates an efficient graph SLAM and achieves a framework running in real-time and targeting sub-meter accuracy with a mobile platform. Integrated with the SLAM framework, we implement a motion-adaptive model for the Inverse Perspective Mapping (IPM). Using motion estimation derived from SLAM, the experimental results show that the proposed approaches provide stable bird's-eye view images, even with significant motion during the drive. Our real-time map generation framework is validated via a long-distance urban test and evaluated at randomly sampled points using Real-Time Kinematic (RTK)-GPS.

  16. Chemical data visualization and analysis with incremental generative topographic mapping: big data challenge.

    PubMed

    Gaspar, Héléna A; Baskin, Igor I; Marcou, Gilles; Horvath, Dragos; Varnek, Alexandre

    2015-01-26

    This paper is devoted to the analysis and visualization in 2-dimensional space of large data sets of millions of compounds using the incremental version of generative topographic mapping (iGTM). The iGTM algorithm implemented in the in-house ISIDA-GTM program was applied to a database of more than 2 million compounds combining data sets of 36 chemicals suppliers and the NCI collection, encoded either by MOE descriptors or by MACCS keys. Taking advantage of the probabilistic nature of GTM, several approaches to data analysis were proposed. The chemical space coverage was evaluated using the normalized Shannon entropy. Different views of the data (property landscapes) were obtained by mapping various physical and chemical properties (molecular weight, aqueous solubility, LogP, etc.) onto the iGTM map. The superposition of these views helped to identify the regions in the chemical space populated by compounds with desirable physicochemical profiles and the suppliers providing them. The data sets similarity in the latent space was assessed by applying several metrics (Euclidean distance, Tanimoto and Bhattacharyya coefficients) to data probability distributions based on cumulated responsibility vectors. As a complementary approach, data sets were compared by considering them as individual objects on a meta-GTM map, built on cumulated responsibility vectors or property landscapes produced with iGTM. We believe that the iGTM methodology described in this article represents a fast and reliable way to analyze and visualize large chemical databases.

  17. Dynamic topographic mapping of the human bladder during voiding using functional near-infrared spectroscopy

    NASA Astrophysics Data System (ADS)

    Macnab, Andrew; Stothers, Lynn; Shadgan, Babak

    2009-03-01

    Functional near-infrared spectroscopy (fNIRS) with multichannel instruments and grids of source-detector pairs can map regional change in oxygenation/hemodynamics. Developed for cortical brain mapping, fNIRS technology has relevance in other organs where pathology affects the microcirculation. We describe fNIRS of the human bladder for evaluation of hemodynamic change during voiding. A 5×5-cm grid with two source-detector pairs is placed on the abdomen suprapubically in an asymptomatic male. In four separate trials, after natural bladder filling NIRS-derived changes in oxyhemoglobin (O2Hb), deoxyhemoglobin (HHb), and total hemoglobin (tHb) concentration are recorded during voiding (measured via uroflow), using four channels of a four wavelength continuous wave instrument. Graphic and video images (topographic mapping software) are generated. Changes in tHb occur following permission to void that predominantly reflected variation in O2Hb; tHb peaks at maximum urine flow then falls to a nadir lasting to uroflow end. Change in fNIRS video color intensity correlates with graphic change in chromophore concentration. Color variations across the mapped area suggest regional hemodynamic variation. fNIRS bladder studies generate reproducible chromophore data consistent with single channel studies, but the dynamic color video and larger tissue area monitored potentially offer new methodology for investigating regional variations in bladder oxygenation and hemodynamics.

  18. The Topographic Data Deluge - Collecting and Maintaining Data in a 21ST Century Mapping Agency

    NASA Astrophysics Data System (ADS)

    Holland, D. A.; Pook, C.; Capstick, D.; Hemmings, A.

    2016-06-01

    In the last few years, the number of sensors and data collection systems available to a mapping agency has grown considerably. In the field, in addition to total stations measuring position, angles and distances, the surveyor can choose from hand-held GPS devices, multi-lens imaging systems or laser scanners, which may be integrated with a laptop or tablet to capture topographic data directly in the field. These systems are joined by mobile mapping solutions, mounted on large or small vehicles, or sometimes even on a backpack carried by a surveyor walking around a site. Such systems allow the raw data to be collected rapidly in the field, while the interpretation of the data can be performed back in the office at a later date. In the air, large format digital cameras and airborne lidar sensors are being augmented with oblique camera systems, taking multiple views at each camera position and being used to create more realistic 3D city models. Lower down in the atmosphere, Unmanned Aerial Vehicles (or Remotely Piloted Aircraft Systems) have suddenly become ubiquitous. Hundreds of small companies have sprung up, providing images from UAVs using ever more capable consumer cameras. It is now easy to buy a 42 megapixel camera off the shelf at the local camera shop, and Canon recently announced that they are developing a 250 megapixel sensor for the consumer market. While these sensors may not yet rival the metric cameras used by today's photogrammetrists, the rapid developments in sensor technology could eventually lead to the commoditization of high-resolution camera systems. With data streaming in from so many sources, the main issue for a mapping agency is how to interpret, store and update the data in such a way as to enable the creation and maintenance of the end product. This might be a topographic map, ortho-image or a digital surface model today, but soon it is just as likely to be a 3D point cloud, textured 3D mesh, 3D city model, or Building Information Model

  19. Topographical organization of human corpus callosum: an fMRI mapping study.

    PubMed

    Fabri, Mara; Polonara, Gabriele; Mascioli, Giulia; Salvolini, Ugo; Manzoni, Tullio

    2011-01-25

    The concept of a topographical map of the corpus callosum (CC) has emerged from human lesion studies and from anatomical tracing investigations in other mammals. Over the last few years, a rising number of researchers have been reporting functional magnetic resonance imaging (fMRI) activation in white matter, particularly the CC. In this study, the scope for describing CC topography with fMRI was explored by evoking activation through simple sensory stimulation and motor tasks. We reviewed our published and unpublished fMRI data on the cortical representation of tactile, gustatory, and visual sensitivity and of motor activation, obtained in 36 volunteers. Activation foci were consistently detected in discrete CC regions: anterior (taste stimuli), central (motor tasks), central and posterior (tactile stimuli), and splenium (visual stimuli). These findings demonstrate that the functional topography of the CC can be explored with fMRI.

  20. Integration of sewer system maps in topographically based sub-basin delineation in suburban areas

    NASA Astrophysics Data System (ADS)

    Jankowfsky, Sonja; Branger, Flora; Braud, Isabelle; Rodriguez, Fabrice

    2010-05-01

    Due to the increase of urbanization, suburban areas experience a fast change in land use. The impact of such modifications on the watershed hydrological cycle must be quantified. To achieve this goal, distributed hydrological models offer the possibility to take into account land use change, and more particularly to consider urbanized areas and anthropogenic features such as roads or ditches and their impact on the hydrological cycle. A detailed definition of the hydrographical drainage network and a corresponding delineation of sub-basins is therefore necessary as input to distributed models. Sub-basins in natural catchments are usually delineated using standard GIS based terrain analysis. The drainage network in urbanised watersheds is often modified, due to sewer systems, ditches, retention basins, etc.. Therefore, its delineation is not only determined by topography. The simple application of terrain analysis algorithms to delineate sub-basins in suburban areas can consequently lead to erroneous sub-basin borders. This study presents an improved approach for sub-basin delineation in suburban areas. It applies to small catchments connected to a sewage plant, located outside the catchment boundary. The approach assumes that subsurface flow follows topography. The method requires a digital elevation model (DEM), maps of land use, cadastre, sewer system and the location of measurement stations and retention basins. Firstly, the topographic catchment border must be defined for the concerning flow measurement station. Standard GIS based algorithms, like the d8-flow direction algorithm (O'Callaghan and Mark, 1984) can be applied using a high resolution DEM. Secondly, the artificial catchment outlets have to be determined. Each catchment has one natural outlet - the measurement station on the river- but it can have several artificial outlets towards a sewage station. Once the outlets are determined, a first approximation of the "theoretical maximal contributing area

  1. Aerial radiometric and magnetic survey: Hobbs National Topographic Map, New Mexico/Texas. Final report

    SciTech Connect

    Not Available

    1980-05-01

    The results of analyses of the airborne gamma radiation and total magnetic field survey flown for the region identified as the Hobbs National Topographic Map NI13-12 are presented in this report. The airborne data gathered are reduced by ground computer facilities to yield profile plots of the basic uranium, thorium and potassium equivalent gamma radiation intensities, ratios of these intensities, aircraft altitude above the earth's surface, total gamma ray and earth's magnetic field intensity, correlated as a function of geologic units. The distribution of data within each geologic unit, for all surveyed map lines and tie lines, has been calculated and is included. Two sets of profiled data for each line are included, with one set displaying the above-cited data. The second set includes only flight line magnetic field, temperature, pressure, altitude data plus magnetic field data as measured at a base station. A general description of the area, including descriptions of the various geologic units and the corresponding airborne data, is included also.

  2. Aerial radiometric and magnetic survey: San Antonio National Topographic Map, Texas. Final report

    SciTech Connect

    Not Available

    1980-05-01

    The results of analyses of the airborne gamma radiation and total magnetic field survey flown for the region identified as the San Antonio National Topographic Map NH14-8 are presented. The airborne data gathered are reduced by ground computer facilities to yield profile plots of the basic uranium, thorium, and potassium equivalent gamma radiation intensities, ratios of these intensities, aircraft altitude above the earth's surface, total gamma ray and earth's magnetic field intensity, correlated as a function of geologic units. The distribution of data within each geologic unit, for all surveyed map lines and tie lines, has been calculated and is included. Two sets of profiled data for each line are included, with one set displaying the above-cited data. The second set includes only flight line magnetic field, temperature, pressure, altitude data plus magnetic field data as measured at a base station. A general description of the area, including descriptions of the various geologic units and the corresponding airborne data, is included also.

  3. Topographic voltage and coherence mapping of brain potentials by means of the symbolic resonance analysis

    NASA Astrophysics Data System (ADS)

    Graben, Peter Beim; Frisch, Stefan; Fink, Andrew; Saddy, Douglas; Kurths, Jürgen

    2005-11-01

    We apply the recently developed symbolic resonance analysis to electroencephalographic measurements of event-related brain potentials (ERPs) in a language processing experiment by using a three-symbol static encoding with varying thresholds for analyzing the ERP epochs, followed by a spin-flip transformation as a nonlinear filter. We compute an estimator of the signal-to-noise ratio (SNR) for the symbolic dynamics measuring the coherence of threshold-crossing events. Hence, we utilize the inherent noise of the EEG for sweeping the underlying ERP components beyond the encoding thresholds. Plotting the SNR computed within the time window of a particular ERP component (the N400) against the encoding thresholds, we find different resonance curves for the experimental conditions. The maximal differences of the SNR lead to the estimation of optimal encoding thresholds. We show that topographic brain maps of the optimal threshold voltages and of their associated coherence differences are able to dissociate the underlying physiological processes, while corresponding maps gained from the customary voltage averaging technique are unable to do so.

  4. Evaluating the Potential of Multispectral Airborne LIDAR for Topographic Mapping and Land Cover Classification

    NASA Astrophysics Data System (ADS)

    Wichmann, V.; Bremer, M.; Lindenberger, J.; Rutzinger, M.; Georges, C.; Petrini-Monteferri, F.

    2015-08-01

    Recently multispectral LiDAR became a promising research field for enhanced LiDAR classification workflows and e.g. the assessment of vegetation health. Current analyses on multispectral LiDAR are mainly based on experimental setups, which are often limited transferable to operational tasks. In late 2014 Optech Inc. announced the first commercially available multispectral LiDAR system for airborne topographic mapping. The combined system makes synchronic multispectral LiDAR measurements possible, solving time shift problems of experimental acquisitions. This paper presents an explorative analysis of the first airborne collected data with focus on class specific spectral signatures. Spectral patterns are used for a classification approach, which is evaluated in comparison to a manual reference classification. Typical spectral patterns comparable to optical imagery could be observed for homogeneous and planar surfaces. For rough and volumetric objects such as trees, the spectral signature becomes biased by signal modification due to multi return effects. However, we show that this first flight data set is suitable for conventional geometrical classification and mapping procedures. Additional classes such as sealed and unsealed ground can be separated with high classification accuracies. For vegetation classification the distinction of species and health classes is possible.

  5. Aerial radiometric and magnetic survey: Perryton National Topographic Map, Texas/Oklahoma/Kansas. Final report

    SciTech Connect

    Not Available

    1980-05-01

    The results of analyses of the airborne gamma radiation and total magnetic field survey flown for the region identified as the Perryton National Topographic Map NJ14-10 are presented. The airborne data gathered are reduced by ground computer facilities to yield profile plots of the basic uranium, thorium and potassium equivalent gamma radiation intensities, ratios of these intensities, aircraft altitude above the earth's surface, total gamma ray and earth's magnetic field intensity, correlated as a function of geologic units. The distribution of data within each geologic unit, for all surveyed map lines and tie lines, has been calculated and is included. Two sets of profiled data for each line are included, with one set displaying the above-cited data. The second set includes only flight line magnetic field, temperature, pressure, altitude data plus magnetic field data as measured at a base station. A general description of the area, including descriptions of the various geologic units and the corresponding airborne data, is included also.

  6. Aerial radiometric and magnetic survey, San Angelo National Topographic Map: Texas, West Texas Project. Final report

    SciTech Connect

    Not Available

    1980-05-01

    The results of analyses of the airborne gamma radiation and total magnetic field survey flown for the region identified as the San Angelo National Topographic Map NH14-1 are presented. The airborne data gathered are reduced by ground computer facilities to yield profile plots of the basic uranium, thorium, and potassium equivalent gamma radiation intensities, ratios of these intensities, aircraft altitude above the earth's surface, total gamma ray and earth's magnetic field intensity, correlated as a function of geologic units. The distribution of data within each geologic unit, for all surveyed map lines and tie lines, has been calculated and is included. Two sets of profiled data for each line are included, with one set displaying the above-cited data. The second set includes only flight line magnetic field, temperature, pressure, altitude data plus magnetic field data as measured at a base station. A general description of the area, including descriptions of the various geologic units and the corresponding airborne data, is included.

  7. Aerial radiometric and magnetic survey: Quincy National Topographic map, Illinois/Missouri. Final report

    SciTech Connect

    Not Available

    1981-01-01

    The results of analyses of the airborne gamma radiation and total magnetic field survey flown for the region identified as the Quincy National Topographic Map NJ15-3 is presented in this report. The airborne data gathered is reduced by ground computer facilities to yield profile plots of the basic uranium, thorium and potassium equivalent gamma radiation intensities, ratios of these intensities, aircraft altitude above the earth's surface, total gamma ray and earth's magnet field intensity, correlated as a function of geologic units. The distribution of data within each geologic unit, for all surveyed map lines and tie lines, has been calculated and is included. Two sets of profiled data for each line are included, with one set displaying the above-cited data. The second set includes only flight line magnetic field, temperature, pressure, altitude data plus magnetic field data as measured at a base station. A general description of the area, including descriptions of the various geologic units and the corresponding airborne data, is included also.

  8. Volumetric evolution of Surtsey, Iceland, from topographic maps and scanning airborne laser altimetry

    USGS Publications Warehouse

    Garvin, J.B.; Williams, R.S.; Frawley, J.J.; Krabill, W.B.

    2000-01-01

    The volumetric evolution of Surtsey has been estimated on the basis of digital elevation models derived from NASA scanning airborne laser altimeter surveys (20 July 1998), as well as digitized 1:5,000-scale topographic maps produced by the National Land Survey of Iceland and by Norrman. Subaerial volumes have been computed from co-registered digital elevation models (DEM's) from 6 July 1968, 11 July 1975, 16 July 1993, and 20 July 1998 (scanning airborne laser altimetry), as well as true surface area (above mean sea level). Our analysis suggests that the subaerial volume of Surtsey has been reduced from nearly 0.100 km3 on 6 July 1968 to 0.075 km3 on 20 July 1998. Linear regression analysis of the temporal evolution of Surtsey's subaerial volume indicates that most of its subaerial surface will be at or below mean sea-level by approximately 2100. This assumes a conservative estimate of continuation of the current pace of marine erosion and mass-wasting on the island, including the indurated core of the conduits of the Surtur I and Surtur II eruptive vents. If the conduits are relatively resistant to marine erosion they will become sea stacks after the rest of the island has become a submarine shoal, and some portions of the island could survive for centuries. The 20 July 1998 scanning laser altimeter surveys further indicate rapid enlargement of erosional canyons in the northeastern portion of the partial tephra ring associated with Surtur I. Continued airborne and eventually spaceborne topographic surveys of Surtsey are planned to refine the inter-annual change of its subaerial volume.

  9. Spirit rover localization and topographic mapping at the landing site of Gusev crater, Mars

    USGS Publications Warehouse

    Li, R.; Archinal, B.A.; Arvidson, R. E.; Bell, J.; Christensen, P.; Crumpler, L.; Des Marais, D.J.; Di, K.; Duxbury, T.; Golombek, M.P.; Grant, J. A.; Greeley, R.; Guinn, J.; Johnson, Aaron H.; Kirk, R.L.; Maimone, M.; Matthies, L.H.; Malin, M.; Parker, T.; Sims, M.; Thompson, S.; Squyres, S. W.; Soderblom, L.A.

    2006-01-01

    By sol 440, the Spirit rover has traversed a distance of 3.76 km (actual distance traveled instead of odometry). Localization of the lander and the rover along the traverse has been successfully performed at the Gusev crater landing site. We localized the lander in the Gusev crater using two-way Doppler radio positioning and cartographic triangulations through landmarks visible in both orbital and ground images. Additional high-resolution orbital images were used to verify the determined lander position. Visual odometry and bundle adjustment technologies were applied to compensate for wheel slippage, azimuthal angle drift, and other navigation errors (which were as large as 10.5% in the Husband Hill area). We generated topographic products, including 72 ortho maps and three-dimensional (3-D) digital terrain models, 11 horizontal and vertical traverse profiles, and one 3-D crater model (up to sol 440). Also discussed in this paper are uses of the data for science operations planning, geological traverse surveys, surveys of wind-related features, and other science applications. Copyright 2006 by the American Geophysical Union.

  10. ATLAS: an airborne active linescan system for high-resolution topographic mapping

    NASA Astrophysics Data System (ADS)

    Willetts, David V.; Kightley, Peter J.; Mole, S. G.; Pearson, Guy N.; Pearson, P.; Coffey, Adrian S.; Stokes, Tim J.; Tapster, Paul R.; Westwood, M.

    2004-12-01

    High resolution ground mapping is of interest for survey and management of long linear features such as roads, railways and pipelines, and for georeferencing of areas such as flood plains for hydrological purposes. ATLAS (Airborne Topographic Laser System) is an active linescan system operating at the eyesafe wavelength of 1.5μm. Built for airborne survey, it is currently certified for use on a Twin Squirrel helicopter for operation from low levels to heights above 500 feet allowing commercial survey in built up areas. The system operates at a pulse repetition frequency of 56kHz with a line completed in 15ms, giving 36 points/m2 at the surface at the design flight speed. At each point the range to the ground is measured together with the scan angle of the system. This data is combined with a system attitude measurement from an integrated inertial navigation system and with system position derived from differential GPS data aboard the platform. A recording system captures the data with a synchronised time-stamp to enable post-processed reconstruction of a cloud of data points that will give a three-dimensional representation of the terrain, allowing the points to be located with respect to absolute Earth referenced coordinates to a precision of 5cm in three axes. This paper summarises the design, harmonisation, evaluation and performance of the system, and shows examples of survey data.

  11. Topographic Mapmaking.

    ERIC Educational Resources Information Center

    Meunier, Tony K.

    1980-01-01

    The making of topographic maps is described as a sequence of the following steps: establishment of control, photogrammetry and field operations, annotation of photographs, stereoplatting, editing, preparation of color-separation plates, and printing. Precise standards are emphasized. (Author/SA)

  12. Merged Shape from Shading and Shape from Stereo for Planetary Topographic Mapping

    NASA Astrophysics Data System (ADS)

    Tyler, Laurence; Cook, Tony; Barnes, Dave; Parr, Gerhard; Kirk, Randolph

    2014-05-01

    Digital Elevation Models (DEMs) of the Moon and Mars have traditionally been produced from stereo imagery from orbit, or from the surface landers or rovers. One core component of image-based DEM generation is stereo matching to find correspondences between images taken from different viewpoints. Stereo matchers that rely mostly on textural features in the images can fail to find enough matched points in areas lacking in contrast or surface texture. This can lead to blank or topographically noisy areas in resulting DEMs. Fine depth detail may also be lacking due to limited precision and quantisation of the pixel matching process. Shape from shading (SFS), a two dimensional version of photoclinometry, utilizes the properties of light reflecting off surfaces to build up localised slope maps, which can subsequently be combined to extract topography. This works especially well on homogeneous surfaces and can recover fine detail. However the cartographic accuracy can be affected by changes in brightness due to differences in surface material, albedo and light scattering properties, and also by the presence of shadows. We describe here experimental research for the Planetary Robotics Vision Data Exploitation EU FP7 project (PRoViDE) into using stereo generated depth maps in conjunction with SFS to recover both coarse and fine detail of planetary surface DEMs. Our Large Deformation Optimisation Shape From Shading (LDOSFS) algorithm uses image data, illumination, viewing geometry and camera parameters to produce a DEM. A stereo-derived depth map can be used as an initial seed if available. The software uses separate Bidirectional Reflectance Distribution Function (BRDF) and SFS modules for iterative processing and to make the code more portable for future development. Three BRDF models are currently implemented: Lambertian, Blinn-Phong, and Oren-Nayar. A version of the Hapke reflectance function, which is more appropriate for planetary surfaces, is under development

  13. Mapping methods for computationally efficient and accurate structural reliability

    NASA Technical Reports Server (NTRS)

    Shiao, Michael C.; Chamis, Christos C.

    1992-01-01

    Mapping methods are developed to improve the accuracy and efficiency of probabilistic structural analyses with coarse finite element meshes. The mapping methods consist of the following: (1) deterministic structural analyses with fine (convergent) finite element meshes; (2) probabilistic structural analyses with coarse finite element meshes; (3) the relationship between the probabilistic structural responses from the coarse and fine finite element meshes; and (4) a probabilistic mapping. The results show that the scatter in the probabilistic structural responses and structural reliability can be efficiently predicted using a coarse finite element model and proper mapping methods with good accuracy. Therefore, large structures can be efficiently analyzed probabilistically using finite element methods.

  14. Topographic gravity modeling for global Bouguer maps to degree 2160: Validation of spectral and spatial domain forward modeling techniques at the 10 microGal level

    NASA Astrophysics Data System (ADS)

    Hirt, Christian; Reußner, Elisabeth; Rexer, Moritz; Kuhn, Michael

    2016-09-01

    Over the past years, spectral techniques have become a standard to model Earth's global gravity field to 10 km scales, with the EGM2008 geopotential model being a prominent example. For some geophysical applications of EGM2008, particularly Bouguer gravity computation with spectral techniques, a topographic potential model of adequate resolution is required. However, current topographic potential models have not yet been successfully validated to degree 2160, and notable discrepancies between spectral modeling and Newtonian (numerical) integration well beyond the 10 mGal level have been reported. Here we accurately compute and validate gravity implied by a degree 2160 model of Earth's topographic masses. Our experiments are based on two key strategies, both of which require advanced computational resources. First, we construct a spectrally complete model of the gravity field which is generated by the degree 2160 Earth topography model. This involves expansion of the topographic potential to the 15th integer power of the topography and modeling of short-scale gravity signals to ultrahigh degree of 21,600, translating into unprecedented fine scales of 1 km. Second, we apply Newtonian integration in the space domain with high spatial resolution to reduce discretization errors. Our numerical study demonstrates excellent agreement (8 μGgal RMS) between gravity from both forward modeling techniques and provides insight into the convergence process associated with spectral modeling of gravity signals at very short scales (few km). As key conclusion, our work successfully validates the spectral domain forward modeling technique for degree 2160 topography and increases the confidence in new high-resolution global Bouguer gravity maps.

  15. Accurate construction of consensus genetic maps via integer linear programming.

    PubMed

    Wu, Yonghui; Close, Timothy J; Lonardi, Stefano

    2011-01-01

    We study the problem of merging genetic maps, when the individual genetic maps are given as directed acyclic graphs. The computational problem is to build a consensus map, which is a directed graph that includes and is consistent with all (or, the vast majority of) the markers in the input maps. However, when markers in the individual maps have ordering conflicts, the resulting consensus map will contain cycles. Here, we formulate the problem of resolving cycles in the context of a parsimonious paradigm that takes into account two types of errors that may be present in the input maps, namely, local reshuffles and global displacements. The resulting combinatorial optimization problem is, in turn, expressed as an integer linear program. A fast approximation algorithm is proposed, and an additional speedup heuristic is developed. Our algorithms were implemented in a software tool named MERGEMAP which is freely available for academic use. An extensive set of experiments shows that MERGEMAP consistently outperforms JOINMAP, which is the most popular tool currently available for this task, both in terms of accuracy and running time. MERGEMAP is available for download at http://www.cs.ucr.edu/~yonghui/mgmap.html.

  16. Application of GNSS-RTK derived topographical maps for rapid environmental monitoring: a case study of Jack Finnery Lake (Perth, Australia).

    PubMed

    Schloderer, Glen; Bingham, Matthew; Awange, Joseph L; Fleming, Kevin M

    2011-09-01

    In environmental monitoring, environmental impact assessments and environmental audits, topographical maps play an essential role in providing a means by which the locations of sampling sites may be selected, in assisting with the interpretation of physical features, and in indicating the impact or potential impact on an area due to changes in the system being monitored (e.g., spatially changing features such as wetlands). Global Navigation Satellite Systems (GNSS) are hereby presented as a rapid method for monitoring spatial changes to support environmental monitoring decisions and policies. To validate the GNSS-based method, a comparison is made of results from a small-scale topographic survey using radio-based real-time kinematic GNSS (GNSS-RTK) and total station survey methods at Jack Finnery Lake, Perth, Australia. The accuracies achieved by the total station in this study were 2 cm horizontally and 6 cm vertically, while the GNSS-RTK also achieved an accuracy of 2 cm horizontally, but only 28 cm vertically. While the GNSS-RTK measurements were less accurate in the height component compared to those from the total station method, it is still capable of achieving accuracies sufficient for a topographic map at a scale of 1:1,750 that could support environmental monitoring tasks such as identifying spatial changes in small water bodies or wetlands. The time taken to perform the survey using GNSS-RTK, however, was much shorter compared to the total station method, thereby making it quite suitable for monitoring spatial changes within an environmental context, e.g., dynamic mining activities that require rapid surveys and the updating of the monitored data at regular intervals.

  17. Mapping methods for computationally efficient and accurate structural reliability

    NASA Technical Reports Server (NTRS)

    Shiao, Michael C.; Chamis, Christos C.

    1991-01-01

    The influence of mesh coarseness in the structural reliability is evaluated. The objectives are to describe the alternatives and to demonstrate their effectiveness. The results show that special mapping methods can be developed by using: (1) deterministic structural responses from a fine (convergent) finite element mesh; (2) probabilistic distributions of structural responses from a coarse finite element mesh; (3) the relationship between the probabilistic structural responses from the coarse and fine finite element meshes; and (4) probabilistic mapping. The structural responses from different finite element meshes are highly correlated.

  18. Evaluation and parameterization of ATCOR3 topographic correction method for forest cover mapping in mountain areas

    NASA Astrophysics Data System (ADS)

    Balthazar, Vincent; Vanacker, Veerle; Lambin, Eric F.

    2012-08-01

    A topographic correction of optical remote sensing data is necessary to improve the quality of quantitative forest cover change analyses in mountainous terrain. The implementation of semi-empirical correction methods requires the calibration of model parameters that are empirically defined. This study develops a method to improve the performance of topographic corrections for forest cover change detection in mountainous terrain through an iterative tuning method of model parameters based on a systematic evaluation of the performance of the correction. The latter was based on: (i) the general matching of reflectances between sunlit and shaded slopes and (ii) the occurrence of abnormal reflectance values, qualified as statistical outliers, in very low illuminated areas. The method was tested on Landsat ETM+ data for rough (Ecuadorian Andes) and very rough mountainous terrain (Bhutan Himalayas). Compared to a reference level (no topographic correction), the ATCOR3 semi-empirical correction method resulted in a considerable reduction of dissimilarities between reflectance values of forested sites in different topographic orientations. Our results indicate that optimal parameter combinations are depending on the site, sun elevation and azimuth and spectral conditions. We demonstrate that the results of relatively simple topographic correction methods can be greatly improved through a feedback loop between parameter tuning and evaluation of the performance of the correction model.

  19. Topographic Map of the Northwest Loire Valles Region of Mars MTM 500k -15/337E OMKT

    USGS Publications Warehouse

    ,

    2003-01-01

    This map, compiled photogrammetrically from Viking Orbiter stereo image pairs, is part of a series of topographic maps of areas of special scientific interest on Mars. MTM 500k –15/337E OMKT: Abbreviation for Mars Transverse Mercator; 1:500,000 series; center of sheet latitude 15° S., longitude 337.5° E. in planetocentric coordinate system (this corresponds to –15/022; latitude 15° S., longitude 22.5° W. in planetographic coordinate system); orthophotomosaic (OM) with color coded (K) topographic contours and nomenclature (T) [Greeley and Batson, 1990]. The figure of Mars used for the computation of the map projection is an oblate spheroid (flattening of 1/176.875) with an equatorial radius of 3396.0 km and a polar radius of 3376.8 km (Kirk and others, 2000). The datum (the 0–km contour line) for elevations is defined as the equipotential surface (gravitational plus rotational) whose average value at the equator is equal to the mean radius as determined by Mars Orbiter Laser Altimeter (Smith and others, 2001). The image base for this map employs Viking Orbiter images from orbit 651. An orthophotomosaic was created on the digital photogrammetric workstation using the DTM compiled from stereo models. Integrated Software for Imagers and Spectrometers (ISIS) (Torson and Becker, 1997) provided the software to project the orthophotomosaic into the Transverse Mercator Projection.

  20. Topographic map of the Parana Valles region of Mars MTM 500k -25/337E OMKT

    USGS Publications Warehouse

    ,

    2003-01-01

    This map, compiled photogrammetrically from Viking Orbiter stereo image pairs, is part of a series of topographic maps of areas of special scientific interest on Mars. MTM 500k –25/347E OMKT: Abbreviation for Mars Transverse Mercator; 1:500,000 series; center of sheet latitude 25° S., longitude 347.5° E. in planetocentric coordinate system (this corresponds to –25/012; latitude 25° S., longitude 12.5° W. in planetographic coordinate system); orthophotomosaic (OM) with color coded (K) topographic contours and nomenclature (T) [Greeley and Batson, 1990]. The figure of Mars used for the computation of the map projection is an oblate spheroid (flattening of 1/176.875) with an equatorial radius of 3396.0 km and a polar radius of 3376.8 km (Kirk and others, 2000). The datum (the 0-km contour line) for elevations is defined as the equipotential surface (gravitational plus rotational) whose average value at the equator is equal to the mean radius as determined by Mars Orbiter Laser Altimeter (Smith and others, 2001). The image base for this map employs Viking Orbiter images from orbit 651. An orthophotomosaic was created on the digital photogrammetric workstation using the DTM compiled from stereo models. Integrated Software for Imagers and Spectrometers (ISIS) (Torson and Becker, 1997) provided the software to project the orthophotomosaic into the Transverse Mercator Projection.

  1. Rapid and Accurate Idea Transfer: Presenting Ideas with Concept Maps

    DTIC Science & Technology

    2008-07-30

    set to 61 military graduate students in four formats: liner text, hypertext, a set of Concept Maps and resources, and a PowerPoint presentation...relevant to H2. Participants The participants were 61 graduate students at Naval Postgraduate School, Monterey, California. The students were officers of...that some participants rushed the Post-test tasks due to self - and environmentally-imposed (e.g., seeing other participants’ progress) concerns about

  2. A Simple and Practical Algorithm for Accurate Gravitational Magnification Maps

    NASA Astrophysics Data System (ADS)

    Walters, S. J.; Forbes, L. K.

    2017-01-01

    In this brief communication, a new method is outlined for modelling magnification patterns on an observer's plane using a first-order approximation to the null geodesic path equations for a point mass lens. For each ray emitted from a source, an explicit calculation is made for the change in position on the observer's plane due to each lens mass. By counting the number of points in each small area of the observer's plane, the magnification at that point can be determined. This allows for a very simple and transparent algorithm. A short Matlab code sample for creating simple magnification maps due to multiple point lenses is included in an appendix.

  3. Fast and accurate mapping of Complete Genomics reads.

    PubMed

    Lee, Donghyuk; Hormozdiari, Farhad; Xin, Hongyi; Hach, Faraz; Mutlu, Onur; Alkan, Can

    2015-06-01

    Many recent advances in genomics and the expectations of personalized medicine are made possible thanks to power of high throughput sequencing (HTS) in sequencing large collections of human genomes. There are tens of different sequencing technologies currently available, and each HTS platform have different strengths and biases. This diversity both makes it possible to use different technologies to correct for shortcomings; but also requires to develop different algorithms for each platform due to the differences in data types and error models. The first problem to tackle in analyzing HTS data for resequencing applications is the read mapping stage, where many tools have been developed for the most popular HTS methods, but publicly available and open source aligners are still lacking for the Complete Genomics (CG) platform. Unfortunately, Burrows-Wheeler based methods are not practical for CG data due to the gapped nature of the reads generated by this method. Here we provide a sensitive read mapper (sirFAST) for the CG technology based on the seed-and-extend paradigm that can quickly map CG reads to a reference genome. We evaluate the performance and accuracy of sirFAST using both simulated and publicly available real data sets, showing high precision and recall rates.

  4. Role of EphA/ephrin-A signaling in the development of topographic maps in mouse corticothalamic projections

    PubMed Central

    Torii, Masaaki; Rakic, Pasko; Levitt, Pat

    2012-01-01

    Corticothalamic (CT) feedback outnumbers thalamocortical projections, and regulates sensory information processing at the level of the thalamus. It is well established that EphA7, a member of EphA receptor family, is involved in the topographic mapping of CT projections. The aim of the present study is to dissect the precise impact of EphA7 on each step of CT growth. We used in utero electroporation-mediated EphA7 overexpression in developing somatosensory CT axons to dissect EphA7/ephrin-A-dependent mechanisms involved in regulating both initial targeting and postnatal growth of the CT projections. Our data revealed that topographic maps of cortical afferents in the ventrobasal complex and medial part of the posterior complex in the thalamus become discernible shortly after birth and are fully established by the second postnatal week. This process starts with the direct ingrowth of the CT axons to the designated areas within target thalamic nuclei and by progressive increase of axonal processes in the terminal zones. Large-scale overproduction and elimination of exuberant widespread axonal branches outside the target zone was not observed. Each developmental event was coordinated by spatially and temporally different responsiveness of CT axons to the ephrin-A gradient in thalamic nuclei, as well as by the matching levels of EphA7 in CT axons and ephrin-As in thalamic nuclei. These results support the concept that the topographic connections between the maps in the cerebral cortex and corresponding thalamic nuclei are genetically pre-specified to a large extent, and established by precise spatio-temporal molecular mechanisms that involve the Eph family of genes. PMID:22821544

  5. Topographic Map of Quadrangle 3768 and 3668, Imam-Saheb (215), Rustaq (216), Baghlan (221), and Taloqan (222) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file report (OFR) number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The OFR numbers range in sequence from 1092 to 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS in cooperation with the

  6. Topographic Map of Quadrangles 3062 and 2962, Charburjak (609), Khanneshin (610), Gawdezereh (615), and Galachah (616) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  7. Topographic Map of Quadrangle 3570, Tagab-E-Munjan (505) and Asmar-Kamdesh (506) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  8. Topographic Map of Quadrangle 3566, Sang-Charak (501) and Sayghan-O-Kamard (502) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  9. South Tank Farm underground storage tank inspection using the topographical mapping system for radiological and hazardous environments

    SciTech Connect

    Armstrong, G.A.; Burks, B.L.; Hoesen, S.D. van

    1997-07-01

    During the winter of 1997 the Topographical Mapping System (TMS) for hazardous and radiological environments and the Interactive Computer-Enhanced Remote-Viewing System (ICERVS) were used to perform wall inspections on underground storage tanks (USTs) W5 and W6 of the South Tank Farm (STF) at Oak Ridge National Laboratory (ORNL). The TMS was designed for deployment in the USTs at the Hanford Site. Because of its modular design, the TMS was also deployable in the USTs at ORNL. The USTs at ORNL were built in the 1940s and have been used to store radioactive waste during the past 50 years. The tanks are constructed with an inner layer of Gunite{trademark} that has been spalling, leaving sections of the inner wall exposed. Attempts to quantify the depths of the spalling with video inspection have proven unsuccessful. The TMS surface-mapping campaign in the STF was initiated to determine the depths of cracks, crevices, and/or holes in the tank walls and to identify possible structural instabilities in the tanks. The development of the TMS and the ICERVS was initiated by DOE for the purpose of characterization and remediation of USTs at DOE sites across the country. DOE required a three-dimensional, topographical mapping system suitable for use in hazardous and radiological environments. The intended application is mapping the interiors of USTs as part of DOE`s waste characterization and remediation efforts, to obtain both baseline data on the content of the storage tank interiors and changes in the tank contents and levels brought about by waste remediation steps. Initially targeted for deployment at the Hanford Site, the TMS has been designed to be a self-contained, compact, and reconfigurable system that is capable of providing rapid variable-resolution mapping information in poorly characterized workspaces with a minimum of operator intervention.

  10. Land-based lidar mapping: a new surveying technique to shed light on rapid topographic change

    USGS Publications Warehouse

    Collins, Brian D.; Kayen, Robert

    2006-01-01

    The rate of natural change in such dynamic environments as rivers and coastlines can sometimes overwhelm the monitoring capacity of conventional surveying methods. In response to this limitation, U.S. Geological Survey (USGS) scientists are pioneering new applications of light detection and ranging (lidar), a laser-based scanning technology that promises to greatly increase our ability to track rapid topographic changes and manage their impact on affected communities.

  11. Can Self-Organizing Maps Accurately Predict Photometric Redshifts?

    NASA Astrophysics Data System (ADS)

    Way, M. J.; Klose, C. D.

    2012-03-01

    We present an unsupervised machine-learning approach that can be employed for estimating photometric redshifts. The proposed method is based on a vector quantization called the self-organizing-map (SOM) approach. A variety of photometrically derived input values were utilized from the Sloan Digital Sky Survey’s main galaxy sample, luminous red galaxy, and quasar samples, along with the PHAT0 data set from the Photo- z Accuracy Testing project. Regression results obtained with this new approach were evaluated in terms of root-mean-square error (RMSE) to estimate the accuracy of the photometric redshift estimates. The results demonstrate competitive RMSE and outlier percentages when compared with several other popular approaches, such as artificial neural networks and Gaussian process regression. SOM RMSE results (using Δz = zphot - zspec) are 0.023 for the main galaxy sample, 0.027 for the luminous red galaxy sample, 0.418 for quasars, and 0.022 for PHAT0 synthetic data. The results demonstrate that there are nonunique solutions for estimating SOM RMSEs. Further research is needed in order to find more robust estimation techniques using SOMs, but the results herein are a positive indication of their capabilities when compared with other well-known methods.

  12. Topographic map of the Tithonium Chasma Region of Mars, MTM 500k -05/277E OMKT

    USGS Publications Warehouse

    ,

    2004-01-01

    This map, compiled photogrammetrically from Viking Orbiter stereo image pairs, is part of a series of topographic maps of areas of special scientific interest on Mars. The figure of Mars used for the computation of the map projection is an oblate spheroid (flattening of 1/176.875) with an equatorial radius of 3396.0 km and a polar radius of 3376.8 km. The datum (the 0-km contour line) for elevations is defined as the equipotential surface (gravitational plus rotational) whose average value at the equator is equal to the mean radius as determined by Mars Orbiter Laser Altimeter. The projection is part of a Mars Transverse Mercator (MTM) system with 20? wide zones. For the area covered by this map sheet the central meridian is at 270? E. (70? W.). The scale factor at the central meridian of the zone containing this quadrangle is 0.9960 relative to a nominal scale of 1:500,000. Longitude increases to the east and latitude is planetocentric as allowed by IAU/IAG standards and in accordance with current NASA and USGS standards. A secondary grid (printed in red) has been added to the map as a reference to the west longitude/planetographic latitude system that is also allowed by IAU/IAG standards and has been used for previous Mars maps.

  13. Topographic Map of the West Candor Chasma Region of Mars, MTM 500k -05/282E OMKT

    USGS Publications Warehouse

    ,

    2004-01-01

    This map, compiled photogrammetrically from Viking Orbiter stereo image pairs, is part of a series of topographic maps of areas of special scientific interest on Mars. The figure of Mars used for the computation of the map projection is an oblate spheroid (flattening of 1/176.875) with an equatorial radius of 3396.0 km and a polar radius of 3376.8 km. The datum (the 0-km contour line) for elevations is defined as the equipotential surface (gravitational plus rotational) whose average value at the equator is equal to the mean radius as determined by Mars Orbiter Laser Altimeter. The projection is part of a Mars Transverse Mercator (MTM) system with 20? wide zones. For the area covered by this map sheet the central meridian is at 290? E. (70? W.). The scale factor at the central meridian of the zone containing this quadrangle is 0.9960 relative to a nominal scale of 1:500,000. Longitude increases to the east and latitude is planetocentric as allowed by IAU/IAG standards and in accordance with current NASA and USGS standards. A secondary grid (printed in red) has been added to the map as a reference to the west longitude/planetographic latitude system that is also allowed by IAU/IAG standards and has been used for previous Mars maps.

  14. Topographic Map of the Ophir and Central Candor Chasmata Region of Mars MTM 500k -05/287E OMKT

    USGS Publications Warehouse

    ,

    2004-01-01

    This map, compiled photogrammetrically from Viking Orbiter stereo image pairs, is part of a series of topographic maps of areas of special scientific interest on Mars. The figure of Mars used for the computation of the map projection is an oblate spheroid (flattening of 1/176.875) with an equatorial radius of 3396.0 km and a polar radius of 3376.8 km. The datum (the 0-km contour line) for elevations is defined as the equipotential surface (gravitational plus rotational) whose average value at the equator is equal to the mean radius as determined by Mars Orbiter Laser Altimeter. The projection is part of a Mars Transverse Mercator (MTM) system with 20? wide zones. For the area covered by this map sheet the central meridian is at 290? E. (70? W.). The scale factor at the central meridian of the zone containing this quadrangle is 0.9960 relative to a nominal scale of 1:500,000. Longitude increases to the east and latitude is planetocentric as allowed by IAU/IAG standards and in accordance with current NASA and USGS standards. A secondary grid (printed in red) has been added to the map as a reference to the west longitude/planetographic latitude system that is also allowed by IAU/IAG standards and has been used for previous Mars maps.

  15. Topographic mapping of trans-cranial magnetic stimulation data on surface rendered MR images of the brain.

    PubMed

    Singh, K D; Hamdy, S; Aziz, Q; Thompson, D G

    1997-10-01

    We present a method for the coregistration and topographic mapping of trans-cranial magnetic stimulation (TCMS) data on surface rendered images of the cortex, derived from Magnetic Resonance Images (MRI). We describe the TCMS procedure and the methods used to locate the TCM stimulation sites in the MRI coordinate system, and the algorithms needed to depict the TCMS distribution as a pseudocolour contour map on the cortical surface. The methods are validated using TCMS data from the hand (thenar) and leg (tibialis muscle). The methods used correctly depict the expected motor representations of each of these areas and we therefore propose that this technique may be used as a functional imaging tool in the investigation of cortical function in both normals and patients.

  16. AI-based technique for tracking chains of discontinuous symbols and its application to the analysis of topographic maps

    NASA Astrophysics Data System (ADS)

    Mecocci, Alessandro; Lilla, Massimiliano

    1994-12-01

    Automatic digitization of topographic maps is a very important task nowadays. Among the different elements of a topographic map discontinuous lines represent important information. Generally they are difficult to track because they show very large gaps, and abrupt direction changes. In this paper an architecture that automates the digitalization of discontinuous lines (dot-dot lines, dash-dot-dash lines, dash-asterisk lines, etc.) is presented. The tracking process must detect the elementary symbols and then concatenate these symbols into a significant chain that represents the line. The proposed architecture is composed of a common kernel, based on a suitable modification of the A* algorithm, that starts different auxiliary processes depending on the particular line to be tracked. Three auxiliary processes are considered: search strategy generation (SSG) which is responsible for the strategy used to scan the image pixels; low level symbol detection (LSD) which decides if a certain image region around the pixel selected by the SSG is an elementary symbol; cost evaluation (CE) which gives the quality of each symbol with respect to the global course of the line. The whole system has been tested on a 1:50.000 map furnished by the Istituto Geografico Militare Italiano (IGMI). The results were very good for different types of discontinuous lines. Over the whole map (i.e. about 80 Mbytes of digitized data) 95% of the elementary symbols of the lines have been correctly chained. The operator time required to correct misclassifications is a small part of the time needed to manually digitize the discontinuous lines.

  17. A new stereo topographic map of Io: Implications for geology from global to local scales

    NASA Astrophysics Data System (ADS)

    White, Oliver L.; Schenk, Paul M.; Nimmo, Francis; Hoogenboom, Trudi

    2014-06-01

    We use Voyager and Galileo stereo pairs to construct the most complete stereo digital elevation model (DEM) of Io assembled to date, controlled using Galileo limb profiles. Given the difficulty of applying these two techniques to Io due to its anomalous surface albedo properties, we have experimented extensively with the relevant procedures in order to generate what we consider to be the most reliable DEMs. Our final stereo DEM covers ~75% of the globe, and we have identified a partial system of longitudinally arranged alternating basins and swells that correlates well to the distribution of mountain and volcano concentrations. We consider the correlation of swells to volcano concentrations and basins to mountain concentrations, to imply a heat flow distribution across Io that is consistent with the asthenospheric tidal heating model of Tackley et al. (2001). The stereo DEM reveals topographic signatures of regional-scale features including Loki Patera, Ra Patera, and the Tvashtar Paterae complex, in addition to previously unrecognized features including an ~1000 km diameter depression and a >2000 km long topographic arc comprising mountainous and layered plains material.

  18. Watershed boundaries and digital elevation model of Oklahoma derived from 1:100,000-scale digital topographic maps

    USGS Publications Warehouse

    Cederstrand, J.R.; Rea, A.H.

    1995-01-01

    This document provides a general description of the procedures used to develop the data sets included on this compact disc. This compact disc contains watershed boundaries for Oklahoma, a digital elevation model, and other data sets derived from the digital elevation model. The digital elevation model was produced using the ANUDEM software package, written by Michael Hutchinson and licensed from the Centre for Resource and Environmental Studies at The Australian National University. Elevation data (hypsography) and streams (hydrography) from digital versions of the U.S. Geological Survey 1:100,000-scale topographic maps were used by the ANUDEM package to produce a hydrologically conditioned digital elevation model with a 60-meter cell size. This digital elevation model is well suited for drainage-basin delineation using automated techniques. Additional data sets include flow-direction, flow-accumulation, and shaded-relief grids, all derived from the digital elevation model, and the hydrography data set used in producing the digital elevation model. The watershed boundaries derived from the digital elevation model have been edited to be consistent with contours and streams from the U.S. Geological Survey 1:100,000-scale topographic maps. The watershed data set includes boundaries for 11-digit Hydrologic Unit Codes (watersheds) within Oklahoma, and 8-digit Hydrologic Unit Codes (cataloging units) outside Oklahoma. Cataloging-unit boundaries based on 1:250,000-scale maps outside Oklahoma for the Arkansas, Red, and White River basins are included. The other data sets cover Oklahoma, and where available, portions of 1:100,000-scale quadrangles adjoining Oklahoma.

  19. Simultaneous topographic and amperometric membrane mapping using an AFM probe integrated biosensor.

    PubMed

    Stanca, Sarmiza Elena; Csaki, Andrea; Urban, Matthias; Nietzsche, Sandor; Biskup, Christoph; Fritzsche, Wolfgang

    2011-02-15

    The investigation of the plasma membrane with intercorrelated multiparameter techniques is a prerequisite for understanding its function. Presented here, is a simultaneous electrochemical and topographic study of the cell membrane using a miniaturized amperometric enzymatic biosensor. The fabrication of this biosensor is also reported. The biosensor combines a scanning force microscopy (AFM) gold-coated cantilever and an enzymatic transducer layer of peroxidases (PODs). When these enzymes are brought in contact with the substrate, the specific redox reaction produces an electric current. The intensity of this current is detected simultaneously with the surface imaging. For sensor characterization, hydroquinone-2-carboxylic acid (HQ) is selected as an intrinsic source of H(2)O(2). HQ has been electrochemically regenerated by the reduction of antraquinone-2-carboxylic acid (AQ). The biosensor reaches the steady state value of the current intensity in 1 ± 0.2s.

  20. The Characteristic and Changes of the Event-Related Potentials (ERP) and Brain Topographic Maps before and after Treatment with rTMS in Subjective Tinnitus Patients

    PubMed Central

    Wang, Changming; Zheng, Yiqing; Zhang, Xueyuan

    2013-01-01

    Objectives To compare the event-related potentials (ERPs) and brain topographic maps characteristic and change in normal controls and subjective tinnitus patients before and after repetitive transcranial magnetic stimulation (rTMS) treatment. Methods and Participants The ERPs and brain topographic maps elicited by target stimulus were compared before and after 1-week treatment with rTMS in 20 subjective tinnitus patients and 16 healthy controls. Results Before rTMS, target stimulus elicited a larger N1 component than the standard stimuli (repeating sounds)in control group but not in tinnitus patients. Instead, the tinnitus group pre-treatment exhibited larger amplitude of N1 in response to standard stimuli than to deviant stimuli. Furthermore tinnitus patients had smaller mismatch negativity (MMN) and late discriminative negativity (LDN)component at Fz compared with the control group. After rTMS treatment, tinnitus patients showed increased N1 response to deviant stimuli and larger MMN and LDN compared with pre-treatment. The topographic maps for the tinnitus group before rTMS -treatment demonstrated global asymmetry between the left and right cerebral hemispheres with more negative activities in left side and more positive activities in right side. In contrast, the brain topographic maps for patients after rTMS-treatment and controls seem roughly symmetrical. The ERP amplitudes and brain topographic maps in post-treatment patient group showed no significant difference with those in controls. Conclusions The characterical changes in ERP and brain topographic maps in tinnitus patients maybe related with the electrophysiological mechanism of tinnitus induction and development. It can be used as an objective biomarker for the evaluation of auditory central in subjective tinnitus patients. These findings support the notion that rTMS treatment in tinnitus patients may exert a beneficial effect. PMID:23951019

  1. True-3D accentuating of grids and streets in urban topographic maps enhances human object location memory.

    PubMed

    Edler, Dennis; Bestgen, Anne-Kathrin; Kuchinke, Lars; Dickmann, Frank

    2015-01-01

    Cognitive representations of learned map information are subject to systematic distortion errors. Map elements that divide a map surface into regions, such as content-related linear symbols (e.g. streets, rivers, railway systems) or additional artificial layers (coordinate grids), provide an orientation pattern that can help users to reduce distortions in their mental representations. In recent years, the television industry has started to establish True-3D (autostereoscopic) displays as mass media. These modern displays make it possible to watch dynamic and static images including depth illusions without additional devices, such as 3D glasses. In these images, visual details can be distributed over different positions along the depth axis. Some empirical studies of vision research provided first evidence that 3D stereoscopic content attracts higher attention and is processed faster. So far, the impact of True-3D accentuating has not yet been explored concerning spatial memory tasks and cartography. This paper reports the results of two empirical studies that focus on investigations whether True-3D accentuating of artificial, regular overlaying line features (i.e. grids) and content-related, irregular line features (i.e. highways and main streets) in official urban topographic maps (scale 1/10,000) further improves human object location memory performance. The memory performance is measured as both the percentage of correctly recalled object locations (hit rate) and the mean distances of correctly recalled objects (spatial accuracy). It is shown that the True-3D accentuating of grids (depth offset: 5 cm) significantly enhances the spatial accuracy of recalled map object locations, whereas the True-3D emphasis of streets significantly improves the hit rate of recalled map object locations. These results show the potential of True-3D displays for an improvement of the cognitive representation of learned cartographic information.

  2. True-3D Accentuating of Grids and Streets in Urban Topographic Maps Enhances Human Object Location Memory

    PubMed Central

    Edler, Dennis; Bestgen, Anne-Kathrin; Kuchinke, Lars; Dickmann, Frank

    2015-01-01

    Cognitive representations of learned map information are subject to systematic distortion errors. Map elements that divide a map surface into regions, such as content-related linear symbols (e.g. streets, rivers, railway systems) or additional artificial layers (coordinate grids), provide an orientation pattern that can help users to reduce distortions in their mental representations. In recent years, the television industry has started to establish True-3D (autostereoscopic) displays as mass media. These modern displays make it possible to watch dynamic and static images including depth illusions without additional devices, such as 3D glasses. In these images, visual details can be distributed over different positions along the depth axis. Some empirical studies of vision research provided first evidence that 3D stereoscopic content attracts higher attention and is processed faster. So far, the impact of True-3D accentuating has not yet been explored concerning spatial memory tasks and cartography. This paper reports the results of two empirical studies that focus on investigations whether True-3D accentuating of artificial, regular overlaying line features (i.e. grids) and content-related, irregular line features (i.e. highways and main streets) in official urban topographic maps (scale 1/10,000) further improves human object location memory performance. The memory performance is measured as both the percentage of correctly recalled object locations (hit rate) and the mean distances of correctly recalled objects (spatial accuracy). It is shown that the True-3D accentuating of grids (depth offset: 5 cm) significantly enhances the spatial accuracy of recalled map object locations, whereas the True-3D emphasis of streets significantly improves the hit rate of recalled map object locations. These results show the potential of True-3D displays for an improvement of the cognitive representation of learned cartographic information. PMID:25679208

  3. The effect of topographic normalization on fractional tree cover mapping in tropical mountains: An assessment based on seasonal Landsat time series

    NASA Astrophysics Data System (ADS)

    Adhikari, Hari; Heiskanen, Janne; Maeda, Eduardo Eiji; Pellikka, Petri K. E.

    2016-10-01

    Free archive of georectified and atmospherically corrected Landsat satellite images create a large range of opportunities for environmental research. However, the topographic effects in images are typically normalized regionally by end-users, and it remains uncertain if this procedure is always necessary. Our objective was to assess the effect of topographic normalization on the fractional tree cover (Fcover) modelling in a tropical mountain landscape, in Southeastern Kenya. We carried out topographic normalization by C-correction for all available Landsat images between June 2012 and October 2013, and examined if normalization improves Fcover regressions. The reference Fcover was based on airborne LiDAR data. Furthermore, we tested several vegetation indices and seasonal features (annual percentiles and means), and compared three digital elevation models (DEM). Our results showed that the fit of Fcover models did not improve after topographic normalization in the case of ratio-based vegetation indices (Normalized Difference Vegetation Index, NDVI; Reduced Simple Ratio, RSR) or Tasseled Cap Greenness but improved in the case of Brightness and Wetness, particularly in the period of the lowest sun elevation. RSR was the best vegetation index to predict Fcover. Furthermore, SRTM DEM provided stronger relationship with cosine of the solar incidence angle than ASTER DEM and regional DEM based on topographic maps. We conclude that NDVI and RSR are robust against topographic effects in the tropical mountain landscapes throughout the year. However, if Tasseled Cap indices are preferred, we recommend topographic normalization using SRTM DEM.

  4. Mapping forested wetlands in the Great Zhan River Basin through integrating optical, radar, and topographical data classification techniques.

    PubMed

    Na, X D; Zang, S Y; Wu, C S; Li, W L

    2015-11-01

    Knowledge of the spatial extent of forested wetlands is essential to many studies including wetland functioning assessment, greenhouse gas flux estimation, and wildlife suitable habitat identification. For discriminating forested wetlands from their adjacent land cover types, researchers have resorted to image analysis techniques applied to numerous remotely sensed data. While with some success, there is still no consensus on the optimal approaches for mapping forested wetlands. To address this problem, we examined two machine learning approaches, random forest (RF) and K-nearest neighbor (KNN) algorithms, and applied these two approaches to the framework of pixel-based and object-based classifications. The RF and KNN algorithms were constructed using predictors derived from Landsat 8 imagery, Radarsat-2 advanced synthetic aperture radar (SAR), and topographical indices. The results show that the objected-based classifications performed better than per-pixel classifications using the same algorithm (RF) in terms of overall accuracy and the difference of their kappa coefficients are statistically significant (p<0.01). There were noticeably omissions for forested and herbaceous wetlands based on the per-pixel classifications using the RF algorithm. As for the object-based image analysis, there were also statistically significant differences (p<0.01) of Kappa coefficient between results performed based on RF and KNN algorithms. The object-based classification using RF provided a more visually adequate distribution of interested land cover types, while the object classifications based on the KNN algorithm showed noticeably commissions for forested wetlands and omissions for agriculture land. This research proves that the object-based classification with RF using optical, radar, and topographical data improved the mapping accuracy of land covers and provided a feasible approach to discriminate the forested wetlands from the other land cover types in forestry area.

  5. Mapping tropical dry forest habitats integrating landsat NDVI, Ikonos imagery, and topographic information in the Caribbean island of Mona.

    PubMed

    Martinuzzi, Sebastiáin; Gould, William A; Ramos Gonzalez, Olga M; Martinez Robles, Alma; Calle Maldonado, Paulina; Pérez-Buitrago, Néstor; Fumero Caban, José J

    2008-06-01

    Assessing the status of tropical dry forest habitats using remote sensing technologies is one of the research priorities for Neotropical forests. We developed a simple method for mapping vegetation and habitats in a tropical dry forest reserve, Mona Island, Puerto Rico, by integrating the Normalized Difference Vegetation Index (NDVI) from Landsat, topographic information, and high-resolution Ikonos imagery. The method was practical for identifying vegetation types in areas with a great variety of plant communities and complex relief, and can be adapted to other dry forest habitats of the Caribbean Islands. NDVI was useful for identifying the distribution of forests, woodlands, and shrubland, providing a natural representation of the vegetation patterns on the island. The use of Ikonos imagery allowed increasing the number of land cover classes. As a result, sixteen land-cover types were mapped over the 5500 ha area, with a kappa coefficient of accuracy equal to 79%. This map is a central piece for modeling vertebrate species distribution and biodiversity patterns by the Puerto Rico Gap Analysis Project, and it is of great value for assisting research and management actions in the island.

  6. Topographical mapping of biochemical properties of articular cartilage in the equine fetlock joint.

    PubMed

    Brama, P A; Tekoppele, J M; Bank, R A; Karssenberg, D; Barneveld, A; van Weeren, P R

    2000-01-01

    The aim of this study was to evaluate topographical differences in the biochemical composition of the extracellular matrix of articular cartilage of the normal equine fetlock joint. Water content, DNA content, glycosaminoglycan (GAG) content and a number of characteristics of the collagen network (total collagen content, levels of hydroxylysine- (Hyl) and the crosslink hydroxylysylpyridinoline, (HP) of articular cartilage in the proximal 1st phalanx (P1), distal 3rd metacarpal bone (MC), and proximal sesamoid bones (PSB) were determined in the left and right fetlock joint of 6 mature horses (age 5-9 years). Twenty-eight sites were sampled per joint, which included the clinically important areas often associated with pathology. Biochemical differences were evaluated between sampling sites and related with the predisposition for osteochondral injury and type of loading. Significant regional differences in the composition of the extracellular matrix existed within the joint. Furthermore, left and right joints exhibited biochemical differences. Typical topographic distribution patterns were observed for each parameter. In P1 the dorsal and palmar articular margin showed a significantly lower GAG content than the more centrally located sites. Collagen content and HP crosslinks were higher at the joint margins than in the central area. Also, in the MC, GAG content was significantly lower at the (dorsal) articular margin compared with the central area. Consistent with findings in P1, collagen and HP crosslinks were significantly lower in the central area compared to the (dorsal) articular margin. Biochemical and biomechanical heterogeneity of articular cartilage is supposed to reflect the different functional demands made at different sites. In the present study, GAG content was highest in the constantly loaded central areas of the joint surfaces. In contrast, collagen content and HP crosslinks were higher in areas intermittently subjected to peak loading which suggests

  7. The digital global geologic map of Mars: chronostratigraphic ages, topographic and crater morphologic characteristics, and updated resurfacing history

    USGS Publications Warehouse

    Tanaka, K.L.; Robbins, S.J.; Fortezzo, C.M.; Skinner, J.A.; Hare, T.M.

    2014-01-01

    A new global geologic map of Mars has been completed in a digital, geographic information system (GIS) format using geospatially controlled altimetry and image data sets. The map reconstructs the geologic history of Mars, which includes many new findings collated in the quarter century since the previous, Viking-based global maps were published, as well as other discoveries that were made during the course of the mapping using new data sets. The technical approach enabled consistent and regulated mapping that is appropriate not only for the map's 1:20,000,000 scale but also for its widespread use by diverse audiences. Each geologic unit outcrop includes basic attributes regarding identity, location, area, crater densities, and chronostratigraphic age. In turn, units are grouped by geographic and lithologic types, which provide synoptic global views of material ages and resurfacing character for the Noachian, Hesperian, and Amazonian periods. As a consequence of more precise and better quality topographic and morphologic data and more complete crater-density dating, our statistical comparisons identify significant refinements for how Martian geologic terrains are characterized. Unit groups show trends in mean elevation and slope that relate to geographic occurrence and geologic origin. In comparison with the previous global geologic map series based on Viking data, the new mapping consists of half the number of units due to simpler, more conservative and globally based approaches to discriminating units. In particular, Noachian highland surfaces overall have high percentages of their areas now dated as an epoch older than in the Viking mapping. Minimally eroded (i.e., pristine) impact craters ≥3 km in diameter occur in greater proportion on Hesperian surfaces. This observation contrasts with a deficit of similarly sized craters on heavily cratered and otherwise degraded Noachian terrain as well as on young Amazonian surfaces. We interpret these as reflecting the

  8. The digital global geologic map of Mars: Chronostratigraphic ages, topographic and crater morphologic characteristics, and updated resurfacing history

    NASA Astrophysics Data System (ADS)

    Tanaka, K. L.; Robbins, S. J.; Fortezzo, C. M.; Skinner, J. A.; Hare, T. M.

    2014-05-01

    A new global geologic map of Mars has been completed in a digital, geographic information system (GIS) format using geospatially controlled altimetry and image data sets. The map reconstructs the geologic history of Mars, which includes many new findings collated in the quarter century since the previous, Viking-based global maps were published, as well as other discoveries that were made during the course of the mapping using new data sets. The technical approach enabled consistent and regulated mapping that is appropriate not only for the map's 1:20,000,000 scale but also for its widespread use by diverse audiences. Each geologic unit outcrop includes basic attributes regarding identity, location, area, crater densities, and chronostratigraphic age. In turn, units are grouped by geographic and lithologic types, which provide synoptic global views of material ages and resurfacing character for the Noachian, Hesperian, and Amazonian periods. As a consequence of more precise and better quality topographic and morphologic data and more complete crater-density dating, our statistical comparisons identify significant refinements for how Martian geologic terrains are characterized. Unit groups show trends in mean elevation and slope that relate to geographic occurrence and geologic origin. In comparison with the previous global geologic map series based on Viking data, the new mapping consists of half the number of units due to simpler, more conservative and globally based approaches to discriminating units. In particular, Noachian highland surfaces overall have high percentages of their areas now dated as an epoch older than in the Viking mapping. Minimally eroded (i.e., pristine) impact craters ≥3 km in diameter occur in greater proportion on Hesperian surfaces. This observation contrasts with a deficit of similarly sized craters on heavily cratered and otherwise degraded Noachian terrain as well as on young Amazonian surfaces. We interpret these as reflecting the

  9. Assessment of drainage network extractions in a low-relief area of the Cuvelai Basin (Namibia) from multiple sources: LiDAR, topographic maps, and digital aerial orthophotographs

    NASA Astrophysics Data System (ADS)

    Persendt, F. C.; Gomez, C.

    2016-05-01

    Accurate delineation of drainage networks (DNs) is crucial for hydrological or hydraulic modelling, and the comprehension of fluvial processes. This task presents challenging aspects in complex lowland terrains with subtle relief and particularly for data poor-areas like the Cuvelai river basin (CRB), Namibia, where the present study takes place. In the CRB standard methods of drainage network extraction from low resolution gridded digital elevation models (DEMs) are unsuitable, hence airborne Light Detection and Ranging (LiDAR) solutions have been utilized. However, LiDAR also presents challenges to large areal applications, especially with a surface roughness exceeding the capacity of numerous algorithms. Indeed, LiDAR-based DEMs (2 and 50 m resolutions) need to be hydrologically corrected and smoothed to enable the extraction of scale-relevant geomorphologic features such as DNs. In the present contribution, channels from topographic maps (blue lines) were compared to those from hydrologically corrected and uncorrected LiDAR DEMs, heads-up digitized channels from high-resolution digital aerial orthophotographs, field-mapped channels and auxiliary data. The 'maximum gradient deterministic eight (D8)' GIS algorithm was applied to the corrected and uncorrected LiDAR DEMs using two network extraction methods: area threshold support and curvature/drop analysis. Different progressive flow accumulation threshold values (12) were used to delineate channels with these methods. Validation was performed between the field-mapped channels, the modelled channels and those derived from multiple sources. Additionally, spatial and quantitative analyses were performed on geomorphologic parameters and indices. The results have shown that hydrologically corrected LiDAR DEMs offer useful details for identifying low order stream segments in headwaters, while blue lines derived from the national hydrography datasets for watersheds, located in elevated and low-lying areas of the study

  10. System and Mass Storage Study for Defense Mapping Agency Topographic Center (DMATC/HC)

    DTIC Science & Technology

    1977-04-01

    Clearfield, Utah . To fulfill its mission of providing MC&G support for the land combat forces of the DOD, DMATC provides the following services...DMAAC, DMAHC, and the DMA map storage depots at Phila- delphia, Pennsylvania, and Clearfield, Utah . This remote query capability and the use of...Users include the Atlantic Richfield Corporation and Mountain Bell Telephone. 4.2.2.4 Software Impact. The software for the ATL falls into two cat

  11. Application of PALSAR-2 remote sensing data for structural geology and topographic mapping in Kelantan river basin, Malaysia

    NASA Astrophysics Data System (ADS)

    Beiranvand Pour, Amin; Hashim, Mazlan

    2016-06-01

    Natural hazards of geological origin are one of major problem during heavy monsoons rainfall in Kelantan state, peninsular Malaysia. Several landslides occur in this region are obviously connected to geological and topographical features, every year. Satellite synthetic aperture radar (SAR) data are particularly applicable for detection of geological structural and topographical features in tropical conditions. In this study, Phased Array type L-band Synthetic Aperture Radar (PALSAR-2), remote sensing data were used to identify high potential risk and susceptible zones for landslide in the Kelantan river basin. Adaptive Local Sigma filter was selected and applied to accomplish speckle reduction and preserving both edges and features in PALSAR-2 fine mode observation images. Different polarization images were integrated to enhance geological structures. Additionally, directional filters were applied to the PALSAR-2 Local Sigma resultant image for edge enhancement and detailed identification of linear features. Several faults, drainage patterns and lithological contact layers were identified at regional scale. In order to assess the results, fieldwork and GPS survey were conducted in the landslide affected zones in the Kelantan river basin. Results demonstrate the most of the landslides were associated with N-S, NNW-SSE and NE-SW trending faults, angulate drainage pattern and metamorphic and Quaternary units. Consequently, geologic structural map were produced for Kelantan river basin using recent PALSAR-2 data, which could be broadly applicable for landslide hazard assessment and delineation of high potential risk and susceptible areas. Landslide mitigation programmes could be conducted in the landslide recurrence regions for reducing catastrophes leading to economic losses and death.

  12. 2D Biotope Mapping Using Combined LIDAR, Topographic Survey And Segmented 1D Flow Modelling

    NASA Astrophysics Data System (ADS)

    Entwistle, N. S.; Heritage, G. L.; Milan, D. J.

    2009-12-01

    Reach averaged habitat availability models such as PHABSIM are limited due principally to their failure to adequately map hydraulic habitat distribution at a representative scale. A lack of morphologic data, represented in the form of sparse geometric cross-sections fails to generate the necessary detail. Advances in data collection, improved spatial modelling algorithms and the advent of cross-section based segmentation routines in 1D hydraulic models provides the opportunity to revisit the issue of hydraulic habitat mapping and modelling. This paper presents a combined technique for habitat characterisation at the sub-bar scale is presented for the River Rede, Northumberland, UK. Terrestrial LIDAR data of floodplain, banks and exposed bar surfaces at an average 0.05 m spacing are combined with sparser total station survey data of submerged morphologic features. These data are interpolated to create a uniform DEM grid at 0.2 m spacing (adequate to detect the smallest variation in hydraulic habitat in this system). The data grid were then imported into the HECRAS 1D hydraulic model to generate a 2 m spaced series of cross-sections along a 220 m sinuous single thread reach exhibiting pool - riffle point-bar morphology. The hydraulic segmentation routine then generated estimates of depth averaged flow velocity, flow depth and sub unit discharge for 40 sub-divisions of the flow width for a series of flows from 0.5 m3s-1 up to bankfull flow of approximately 9 m3s-1. The resultant hydraulic data were exported in the project coordinate system and plotted to reveal the 2D pattern of hydraulic biotopes present across the range of flows modelled. The results reveal broadly realistic patterns consistent with previous empirical studies and compare well with LIDAR based biotope maps. Analysis of the temporal pattern of biotope change indicates that biotope diversity and complexity is at a maximum at lower flows and across shallower area (riffles) and that these dominate the

  13. Integrating Physical and Topographic Information Into a Fuzzy Scheme to Map Flooded Area by SAR

    PubMed Central

    Pierdicca, Nazzareno; Chini, Marco; Pulvirenti, Luca; Macina, Flavia

    2008-01-01

    A flood mapping procedure based on a fuzzy sets theory has been developed. The method is based on the integration of Synthetic Aperture Radar (SAR) measurements with additional data on the inundated area, such as a land cover map and a digital elevation model (DEM). The information on land cover has allowed us to account for both specular reflection, typical of open water, and double bounce backscattering, typical of forested and urban areas. DEM has been exploited to include simple hydraulic considerations on the dependence of inundation probability on surface characteristics. Contextual information has been taken into account too. The proposed algorithm has been tested on a flood occurred in Italy on November 1994. A pair of ERS-1 images, collected before and after (three days later) the flood, has been used. The results have been compared with the data provided by a ground survey carried out when the flood reached its maximum extension. Despite the temporal mismatch between the survey and the post-inundation SAR image, the comparison has yielded encouraging results, with the 87% of the pixels correctly classified as inundated. PMID:27879928

  14. A Mars' Year of Topographic Mapping With The Mars Orbiter Laser Altimeter

    NASA Technical Reports Server (NTRS)

    Smith, David E.; Zuber, Maria T.

    2001-01-01

    Since the end of February 1999 the Mars Orbiter Laser Altimeter (MOLA) has been mapping the planet continuously except for a 2 month period around solar conjunction in June 2000. At the end of January 2001 the Mars Global Surveyor Spacecraft (MGS) had completed its prime Mission, one Mars year of observing the planet, and begun the Extended Mission of slightly more than 14 months. MOLA will had acquired over 530 million altimetric measurements by early 2001, and continued to work perfectly. During the Extended Mission the main objective for MOLA will be observations of the seasonal variations in the locations and altitudes of clouds, the changes in the elevations of the polar icecaps due to the deposition and sublimation Of CO2, as well as supporting NASA's search for suitable future landing sites.

  15. WM-DOVA maps for accurate polyp highlighting in colonoscopy: Validation vs. saliency maps from physicians.

    PubMed

    Bernal, Jorge; Sánchez, F Javier; Fernández-Esparrach, Gloria; Gil, Debora; Rodríguez, Cristina; Vilariño, Fernando

    2015-07-01

    We introduce in this paper a novel polyp localization method for colonoscopy videos. Our method is based on a model of appearance for polyps which defines polyp boundaries in terms of valley information. We propose the integration of valley information in a robust way fostering complete, concave and continuous boundaries typically associated to polyps. This integration is done by using a window of radial sectors which accumulate valley information to create WM-DOVA (Window Median Depth of Valleys Accumulation) energy maps related with the likelihood of polyp presence. We perform a double validation of our maps, which include the introduction of two new databases, including the first, up to our knowledge, fully annotated database with clinical metadata associated. First we assess that the highest value corresponds with the location of the polyp in the image. Second, we show that WM-DOVA energy maps can be comparable with saliency maps obtained from physicians' fixations obtained via an eye-tracker. Finally, we prove that our method outperforms state-of-the-art computational saliency results. Our method shows good performance, particularly for small polyps which are reported to be the main sources of polyp miss-rate, which indicates the potential applicability of our method in clinical practice.

  16. MOSAIK: a hash-based algorithm for accurate next-generation sequencing short-read mapping.

    PubMed

    Lee, Wan-Ping; Stromberg, Michael P; Ward, Alistair; Stewart, Chip; Garrison, Erik P; Marth, Gabor T

    2014-01-01

    MOSAIK is a stable, sensitive and open-source program for mapping second and third-generation sequencing reads to a reference genome. Uniquely among current mapping tools, MOSAIK can align reads generated by all the major sequencing technologies, including Illumina, Applied Biosystems SOLiD, Roche 454, Ion Torrent and Pacific BioSciences SMRT. Indeed, MOSAIK was the only aligner to provide consistent mappings for all the generated data (sequencing technologies, low-coverage and exome) in the 1000 Genomes Project. To provide highly accurate alignments, MOSAIK employs a hash clustering strategy coupled with the Smith-Waterman algorithm. This method is well-suited to capture mismatches as well as short insertions and deletions. To support the growing interest in larger structural variant (SV) discovery, MOSAIK provides explicit support for handling known-sequence SVs, e.g. mobile element insertions (MEIs) as well as generating outputs tailored to aid in SV discovery. All variant discovery benefits from an accurate description of the read placement confidence. To this end, MOSAIK uses a neural-network based training scheme to provide well-calibrated mapping quality scores, demonstrated by a correlation coefficient between MOSAIK assigned and actual mapping qualities greater than 0.98. In order to ensure that studies of any genome are supported, a training pipeline is provided to ensure optimal mapping quality scores for the genome under investigation. MOSAIK is multi-threaded, open source, and incorporated into our command and pipeline launcher system GKNO (http://gkno.me).

  17. A digital version of the 1970 U.S. Geological Survey topographic map of the San Francisco Bay region, three sheets, 1:125,000

    USGS Publications Warehouse

    Aitken, Douglas S.

    1997-01-01

    This Open-File report is a digital topographic map database. It contains a digital version of the 1970 U.S. Geological Survey topographic map of the San Francisco Bay Region (3 sheets), at a scale of 1:125,000. These ARC/INFO coverages are in vector format. The vectorization process has distorted characters representing letters and numbers, as well as some road and other symbols, making them difficult to read in some instances. This pamphlet serves to introduce and describe the digital data. There is no paper map included in the Open-File report. The content and character of the database and methods of obtaining it are described herein.

  18. Topographical Mapping of the Rainbow Trout (Oncorhynchus mykiss) Microbiome Reveals a Diverse Bacterial Community with Antifungal Properties in the Skin

    PubMed Central

    Lowrey, Liam; Woodhams, Douglas C.; Tacchi, Luca

    2015-01-01

    The mucosal surfaces of wild and farmed aquatic vertebrates face the threat of many aquatic pathogens, including fungi. These surfaces are colonized by diverse symbiotic bacterial communities that may contribute to fight infection. Whereas the gut microbiome of teleosts has been extensively studied using pyrosequencing, this tool has rarely been employed to study the compositions of the bacterial communities present on other teleost mucosal surfaces. Here we provide a topographical map of the mucosal microbiome of an aquatic vertebrate, the rainbow trout (Oncorhynchus mykiss). Using 16S rRNA pyrosequencing, we revealed novel bacterial diversity at each of the five body sites sampled and showed that body site is a strong predictor of community composition. The skin exhibited the highest diversity, followed by the olfactory organ, gills, and gut. Flectobacillus was highly represented within skin and gill communities. Principal coordinate analysis and plots revealed clustering of external sites apart from internal sites. A highly diverse community was present within the epithelium, as demonstrated by confocal microscopy and pyrosequencing. Using in vitro assays, we demonstrated that two Arthrobacter sp. skin isolates, a Psychrobacter sp. strain, and a combined skin aerobic bacterial sample inhibit the growth of Saprolegnia australis and Mucor hiemalis, two important aquatic fungal pathogens. These results underscore the importance of symbiotic bacterial communities of fish and their potential role for the control of aquatic fungal diseases. PMID:26209676

  19. Extraction of Knowledge from the Topographic Attentive Mapping Network and its Application in Skill Analysis of Table Tennis

    PubMed Central

    Fujii, Masanori; Maeda, Toshiyuki; Leveille, Jasmin; Tasaka, Tokio

    2017-01-01

    Abstract The Topographic Attentive Mapping (TAM) network is a biologically-inspired classifier that bears similarities to the human visual system. In case of wrong classification during training, an attentional top-down signal modulates synaptic weights in intermediate layers to reduce the difference between the desired output and the classifier’s output. When used in a TAM network, the proposed pruning algorithm improves classification accuracy and allows extracting knowledge as represented by the network structure. In this paper, sport technique evaluation of motion analysis modelled by the TAM network was discussed. The trajectory pattern of forehand strokes of table tennis players was analyzed with nine sensor markers attached to the right upper arm of players. With the TAM network, input attributes and technique rules were extracted in order to classify the skill level of players of table tennis from the sensor data. In addition, differences between the elite player, middle level player and beginner were clarified; furthermore, we discussed how to improve skills specific to table tennis from the view of data analysis. PMID:28210337

  20. Sedimentary Facies Mapping Based on Tidal Channel Network and Topographic Features

    NASA Astrophysics Data System (ADS)

    Ryu, J. H.; Lee, Y. K.; Kim, K.; Kim, B.

    2015-12-01

    Tidal flats on the west coast of Korea suffer intensive changes in their surface sedimentary facies as a result of the influence of natural and artificial changes. Spatial relationships between surface sedimentary facies distribution and benthic environments were estimated for the open-type Ganghwa tidal flat and semi closed-type Hwangdo tidal flat, Korea. In this study, we standardized the surface sedimentary facies and tidal channel index of the channel density, distance, thickness and order. To extract tidal channel information, we used remotely sensed data, such as those from the Korea Multi-Purpose Satellite (KOMPSAT)-2, KOMPSAT-3, and aerial photographs. Surface sedimentary facies maps were generated based on field data using an interpolation method.The tidal channels in each sediment facies had relatively constant meandering patterns, but the density and complexity were distinguishable. The second fractal dimension was 1.7-1.8 in the mud flat, about 1.4 in the mixed flat, and about 1.3 in the sand flat. The channel density was 0.03-0.06 m/m2 in the mud flat and less than 0.02 m/m2 in the mixed and sand flat areas of the two test areas. Low values of the tidal channel index, which indicated a simple pattern of tidal channel distribution, were identified at areas having low elevation and coarse-grained sediments. By contrast, high values of the tidal channel index, which indicated a dendritic pattern of tidal channel distribution, were identified at areas having high elevation and fine-grained sediments. Surface sediment classification based on remotely sensed data must circumspectly consider an effective critical grain size, water content, local topography, and intertidal structures.

  1. Rigorous Photogrammetric Processing of CHANG'E-1 and CHANG'E-2 Stereo Imagery for Lunar Topographic Mapping

    NASA Astrophysics Data System (ADS)

    Di, K.; Liu, Y.; Liu, B.; Peng, M.

    2012-07-01

    Chang'E-1(CE-1) and Chang'E-2(CE-2) are the two lunar orbiters of China's lunar exploration program. Topographic mapping using CE-1 and CE-2 images is of great importance for scientific research as well as for preparation of landing and surface operation of Chang'E-3 lunar rover. In this research, we developed rigorous sensor models of CE-1 and CE-2 CCD cameras based on push-broom imaging principle with interior and exterior orientation parameters. Based on the rigorous sensor model, the 3D coordinate of a ground point in lunar body-fixed (LBF) coordinate system can be calculated by space intersection from the image coordinates of con-jugate points in stereo images, and the image coordinates can be calculated from 3D coordinates by back-projection. Due to uncer-tainties of the orbit and the camera, the back-projected image points are different from the measured points. In order to reduce these inconsistencies and improve precision, we proposed two methods to refine the rigorous sensor model: 1) refining EOPs by correcting the attitude angle bias, 2) refining the interior orientation model by calibration of the relative position of the two linear CCD arrays. Experimental results show that the mean back-projection residuals of CE-1 images are reduced to better than 1/100 pixel by method 1 and the mean back-projection residuals of CE-2 images are reduced from over 20 pixels to 0.02 pixel by method 2. Consequently, high precision DEM (Digital Elevation Model) and DOM (Digital Ortho Map) are automatically generated.

  2. Topographic map of the western region of Dao Vallis in Hellas Planitia, Mars; MTM 500k -40/082E OMKT

    USGS Publications Warehouse

    Rosiek, Mark R.; Redding, Bonnie L.; Galuszka, Donna M.

    2006-01-01

    This map, compiled photogrammetrically from Viking Orbiter stereo image pairs, is part of a series of topographic maps of areas of special scientific interest on Mars. Contours were derived from a digital terrain model (DTM) compiled on a digital photogrammetric workstation using Viking Orbiter stereo image pairs with orientation parameters derived from an analytic aerotriangulation. The image base for this map employs Viking Orbiter images from orbits 406 and 363. An orthophotomosaic was created on the digital photogrammetric workstation using the DTM compiled from stereo models.

  3. The applicability of space imagery to the small-scale topographic mapping of developing countries: A case study — the Sudan

    NASA Astrophysics Data System (ADS)

    Petrie, G.; El Niweiri, A. E. H.

    After reviewing the current status of topographic mapping in Sudan, the paper considers the possible applications of space inagery to the topographic mapping of the country at 1 : 100,000 scale. A comprehensive series of tests of the geometric accuracy and interpretability of six types of space imagery taken by the Landsat MSS, RBV and TM sensors, the MOMS scanner, the ESA Metric Camera and NASA's Large Format Camera have been conducted over a test area established in the Red Sea Hills area of Sudan supplemented by further interpretation tests carried out over the area of Khartoum and the Gezira. The results of these tests are given together with those from comparative tests carried out with other images acquired by the same sensors over test areas in developed countries (UK and USA). Further collateral information on topographic mapping at 1 : 100,000 scale from SPOT imagery has been provided by the Ordnance Survey based on its tests and experience in North Yemen. The paper concludes with an analysis of the possibilities of mapping the main (non-equatorial) area of Sudan at 1 : 100,000 scale based on the results of the extensive series of tests reported in the paper and elsewhere. Consideration is also given to the infrastructure required to support such a programme.

  4. Carbene footprinting accurately maps binding sites in protein–ligand and protein–protein interactions

    PubMed Central

    Manzi, Lucio; Barrow, Andrew S.; Scott, Daniel; Layfield, Robert; Wright, Timothy G.; Moses, John E.; Oldham, Neil J.

    2016-01-01

    Specific interactions between proteins and their binding partners are fundamental to life processes. The ability to detect protein complexes, and map their sites of binding, is crucial to understanding basic biology at the molecular level. Methods that employ sensitive analytical techniques such as mass spectrometry have the potential to provide valuable insights with very little material and on short time scales. Here we present a differential protein footprinting technique employing an efficient photo-activated probe for use with mass spectrometry. Using this methodology the location of a carbohydrate substrate was accurately mapped to the binding cleft of lysozyme, and in a more complex example, the interactions between a 100 kDa, multi-domain deubiquitinating enzyme, USP5 and a diubiquitin substrate were located to different functional domains. The much improved properties of this probe make carbene footprinting a viable method for rapid and accurate identification of protein binding sites utilizing benign, near-UV photoactivation. PMID:27848959

  5. Carbene footprinting accurately maps binding sites in protein-ligand and protein-protein interactions.

    PubMed

    Manzi, Lucio; Barrow, Andrew S; Scott, Daniel; Layfield, Robert; Wright, Timothy G; Moses, John E; Oldham, Neil J

    2016-11-16

    Specific interactions between proteins and their binding partners are fundamental to life processes. The ability to detect protein complexes, and map their sites of binding, is crucial to understanding basic biology at the molecular level. Methods that employ sensitive analytical techniques such as mass spectrometry have the potential to provide valuable insights with very little material and on short time scales. Here we present a differential protein footprinting technique employing an efficient photo-activated probe for use with mass spectrometry. Using this methodology the location of a carbohydrate substrate was accurately mapped to the binding cleft of lysozyme, and in a more complex example, the interactions between a 100 kDa, multi-domain deubiquitinating enzyme, USP5 and a diubiquitin substrate were located to different functional domains. The much improved properties of this probe make carbene footprinting a viable method for rapid and accurate identification of protein binding sites utilizing benign, near-UV photoactivation.

  6. Carbene footprinting accurately maps binding sites in protein-ligand and protein-protein interactions

    NASA Astrophysics Data System (ADS)

    Manzi, Lucio; Barrow, Andrew S.; Scott, Daniel; Layfield, Robert; Wright, Timothy G.; Moses, John E.; Oldham, Neil J.

    2016-11-01

    Specific interactions between proteins and their binding partners are fundamental to life processes. The ability to detect protein complexes, and map their sites of binding, is crucial to understanding basic biology at the molecular level. Methods that employ sensitive analytical techniques such as mass spectrometry have the potential to provide valuable insights with very little material and on short time scales. Here we present a differential protein footprinting technique employing an efficient photo-activated probe for use with mass spectrometry. Using this methodology the location of a carbohydrate substrate was accurately mapped to the binding cleft of lysozyme, and in a more complex example, the interactions between a 100 kDa, multi-domain deubiquitinating enzyme, USP5 and a diubiquitin substrate were located to different functional domains. The much improved properties of this probe make carbene footprinting a viable method for rapid and accurate identification of protein binding sites utilizing benign, near-UV photoactivation.

  7. Automated construction of highly accurate meiotic mapping panels for human chromosome 7 using BINS

    SciTech Connect

    Liu, L.; Helms, C.; Dutchik, J.

    1994-09-01

    Development of a set of highly accurate meiotic breakpoint panels for the human genome based on CEPH reference pedigree genotypes and highly informative microsatellite markers will provide a valuable resource for the efficient mapping of new markers and will promote the rapid integration of physical and genetic map information. Key to the development of such a panel is the availability of a reliable set of genotypic data and automated methods for panel construction and verification. We have recently completed construction of comprehensive, microsatellite, and index linkage maps for human chromosome 7 using CEPH pedigree genotypes and CRI-MAP (with odds for marker order of 1000:1). A subset of markers used to build these maps that were typed on 40 CEPH families and rigorously checked for errors (e.g. using the Chrompics option of CRI-MAP) were selected for use to develop a set of meiotic breakpoint panels. The BINS programs has been developed to determine the locations of reliable crossovers using primary genotype data for every individual of each pedigree with the aim of creating crossover mapping panels. BINS utilizes a set of algorithms that parses out reliable and consistent data and uses these data to construct a crossover-based map. BINS has been utilized to construct a primary meiotic mapping panel for human chromosome 7. A graphical display of the breakpoint data provides an easily interpretable image and specifically highlights possible data inconsistencies (e.g. questionable double crossovers). We have used BINS and the CEPH genotypes to construct a preliminary set of panels for chromosome 7. Refinement of the panels is in progress.

  8. FANSe: an accurate algorithm for quantitative mapping of large scale sequencing reads

    PubMed Central

    Zhang, Gong; Fedyunin, Ivan; Kirchner, Sebastian; Xiao, Chuanle; Valleriani, Angelo; Ignatova, Zoya

    2012-01-01

    The most crucial step in data processing from high-throughput sequencing applications is the accurate and sensitive alignment of the sequencing reads to reference genomes or transcriptomes. The accurate detection of insertions and deletions (indels) and errors introduced by the sequencing platform or by misreading of modified nucleotides is essential for the quantitative processing of the RNA-based sequencing (RNA-Seq) datasets and for the identification of genetic variations and modification patterns. We developed a new, fast and accurate algorithm for nucleic acid sequence analysis, FANSe, with adjustable mismatch allowance settings and ability to handle indels to accurately and quantitatively map millions of reads to small or large reference genomes. It is a seed-based algorithm which uses the whole read information for mapping and high sensitivity and low ambiguity are achieved by using short and non-overlapping reads. Furthermore, FANSe uses hotspot score to prioritize the processing of highly possible matches and implements modified Smith–Watermann refinement with reduced scoring matrix to accelerate the calculation without compromising its sensitivity. The FANSe algorithm stably processes datasets from various sequencing platforms, masked or unmasked and small or large genomes. It shows a remarkable coverage of low-abundance mRNAs which is important for quantitative processing of RNA-Seq datasets. PMID:22379138

  9. FANSe: an accurate algorithm for quantitative mapping of large scale sequencing reads.

    PubMed

    Zhang, Gong; Fedyunin, Ivan; Kirchner, Sebastian; Xiao, Chuanle; Valleriani, Angelo; Ignatova, Zoya

    2012-06-01

    The most crucial step in data processing from high-throughput sequencing applications is the accurate and sensitive alignment of the sequencing reads to reference genomes or transcriptomes. The accurate detection of insertions and deletions (indels) and errors introduced by the sequencing platform or by misreading of modified nucleotides is essential for the quantitative processing of the RNA-based sequencing (RNA-Seq) datasets and for the identification of genetic variations and modification patterns. We developed a new, fast and accurate algorithm for nucleic acid sequence analysis, FANSe, with adjustable mismatch allowance settings and ability to handle indels to accurately and quantitatively map millions of reads to small or large reference genomes. It is a seed-based algorithm which uses the whole read information for mapping and high sensitivity and low ambiguity are achieved by using short and non-overlapping reads. Furthermore, FANSe uses hotspot score to prioritize the processing of highly possible matches and implements modified Smith-Watermann refinement with reduced scoring matrix to accelerate the calculation without compromising its sensitivity. The FANSe algorithm stably processes datasets from various sequencing platforms, masked or unmasked and small or large genomes. It shows a remarkable coverage of low-abundance mRNAs which is important for quantitative processing of RNA-Seq datasets.

  10. Topographic Map Reading

    DTIC Science & Technology

    1991-05-12

    iWason, 1960, Mynatt variant configurations of features in object recognition.) et al., 1977]. The chance for error is enhanced in the localization task...Machine Intelligence, 11:1121-1139, 1988. [ Mynatt et al., 1977] C. R. Mynatt , M. E. Doherty, and R. D. Tweeny. Confirmation bias in a simuiated re- search

  11. Comparative lahar hazard mapping at Volcan Citlaltépetl, Mexico using SRTM, ASTER and DTED-1 digital topographic data

    NASA Astrophysics Data System (ADS)

    Hubbard, Bernard E.; Sheridan, Michael F.; Carrasco-Núñez, Gerardo; Díaz-Castellón, Rodolfo; Rodríguez, Sergio Raúl

    2007-02-01

    In this study, we evaluated and compared the utility of spaceborne SRTM and ASTER DEMs with baseline DTED-1 "bald-earth" topography for mapping lahar inundation hazards from volcan Citlaltépetl, Mexico, a volcano which has had a history of producing debris flows of various extents. In particular, we tested the utility of these topographic datasets for resolving ancient valley-filling deposits exposed around the flanks of the volcano, for determining their magnitude using paleohydrologic methods and for forecasting their inundation limits in the future. We also use the three datasets as inputs to a GIS stream inundation flow model, LAHARZ, and compare the results. In general all three datasets, with spatial resolution of 90 m or better, were capable of resolving debris flow and lahar deposits at least 3 × 10 6 m 3 in volume or larger. Canopy- and slope-related height errors in the ASTER and SRTM DEMs limit their utility for measuring valley-filling cross-sectional area and deriving flow magnitude for the smallest deposits using a cross-sectional area to volume scaling equation. Height errors in the ASTER and SRTM DEMs also causes problems in resolving stream valley hydrography which controls lahar flow paths and stream valley morphology which controls lahar filling capacity. However, both of the two spaceborne DEM datasets are better than DTED-1 at resolving fine details in stream hydrography and erosional morphologies of volcaniclastics preserved in the valleys around the more humid, eastern flanks of the volcanic range. The results of LAHARZ flow inundation modeling using all three DEMs as inputs are remarkably similar and co-validate one another. For example, at Citlaltépetl all lahar simulations show that the city of Orizaba is the most vulnerable to flows similar in magnitude to, or larger than, one that occurred in 1920. Many of the other cities and towns illustrated are built higher up on terrace deposits of older debris flows, and are safe from all but

  12. Glaciers change over the last century, Caucasus Mountains, Georgia, observed by the old topographical maps, Landsat and ASTER satellite imagery

    NASA Astrophysics Data System (ADS)

    Tielidze, L. G.

    2015-07-01

    The study of glaciers in the Caucasus began in the first quarter of the 18th century. The first data on glaciers can be found in the works of great Georgian scientist Vakhushti Bagrationi. After almost hundred years the foreign scientists began to describe the glaciers of Georgia. Information about the glaciers of Georgia can be found in the works of W. Abich (1865), D. Freshfield (1869), G. Radde (1873), N. Dinik (1884), I. Rashevskiy (1904), A. Reinhardt (1916, 1917) etc. The first statistical information about the glaciers of Georgia are found in the catalog of the Caucasus glaciers compiled by K. Podozerskiy in 1911 (Podozerkiy, 1911). Then, in 1960s the large-scale (1:25 000, 1:50 000) topographic maps were published, which were compiled in 1955-1960 on the basis of the space images. On the basis of the mentioned maps R. Gobejishvili gave quite detailed statistical information about the glaciers of Georgia (Gobejishvili, 1989). Then in 1975 the glaciological catalog of the former USSR was published (The Catalog of Glaciers of the USSR, Vol. 8-9, 1975), where the statistical information about the glaciers of Georgia was obtained on the basis of the space images of 1970-1975. Thus, complete statistical information on the glaciers of Georgia has not been published for about last 40 years. Data obtained by us by processing of the space images of Landsat and ASTER is the latest material, which is the best tool for identification of the change in the number and area of the glaciers of Georgia during the last one century. The article presents the percentage and quantitative changes in the number and area of the glaciers of Georgia in the years of 1911-1960-1975-2014, according to the individual river basins. The air temperature course of the Georgia's high mountain weather stations has been studied. The river basins have been revealed, where there are the highest indices of the reduction in area and number of the glaciers and the reasons have been explained.

  13. Global, regional and local stratigraphy of dwarf planet (1) Ceres: results from geologic and topographic mapping using images of the Dawn camera

    NASA Astrophysics Data System (ADS)

    Wagner, Roland J.; Schmedemann, Nico; Stephan, Katrin; Jaumann, Ralf; Kneissl, Thomas; Neesemann, Adrian; Krohn, Katrin; Otto, Katharina; Preusker, Frank; Kersten, Elke; Roatsch, Thomas; Hiesinger, Harald; Williams, David A.; Yingst, Aileen; Crown, David A.; Mest, Scott C.; Raymond, Carol A.; Russell, Christopher T.

    2016-04-01

    Since its insertion into orbit around dwarf planet (1) Ceres, the camera aboard the Dawn spacecraft has been acquiring imaging data at increasing spatial resolutions from continuously lower orbit altitudes (Survey orbit, high-altitude and low-altitude mapping orbit (HAMO and LAMO, respectively)). In this paper we use global, regional and local mosaics of images from each of the various orbital phases for geologic mapping and crater counting. Geologic units are mapped according to morphology, topography, and superimposed crater frequency. Topographic information is taken from digital elevation models (DEMs). Stratigraphic positions of geologic and topographic units are obtained from their cumulative crater frequencies. Ceres' globally abundant cratered plains can be subdivided by their topographic position (high, middle, and low level) and by a generally higher or lower crater frequency (densely versus sparsely cratered plains). Large impact features and craters are mapped as separate units. Densely cratered plains were found to be the spatially most abundant units which occur at all three topographic levels, with cratering model ages ranging from ~3.7 - ~3.3 Ga. Sparsely cratered plains are on the order of ~3 Ga old. No correlation between model age and topographic level could be verified. The three large impact features Kerwan, Yalode and Urvara form an age sequence from older to younger, with cratering model ages of ~2.8 Ga, ~1.8 Ga, and 0.48 Ga respectively. Kerwan and Urvara can be used as stratigraphic markers to subdivide Ceres' stratigraphic column into the Urvaran (youngest), Kerwanan, and Pre-Kerwanan (oldest) system or period. Currently, the Dawn spacecraft is in the LAMO orbit, providing images with spatial resolutions of ~35 m/pxl. One of the first target areas to be examined in these data is the ~6 km high feature Ahuna Mons. Small craters on the summit region were measured and a model age of ~ 10 Ma was found, based on poor statistics, however. Also

  14. Accurate and unambiguous tag-to-gene mapping in serial analysis of gene expression

    PubMed Central

    Malig, Rodrigo; Varela, Cristian; Agosin, Eduardo; Melo, Francisco

    2006-01-01

    Background In this study, we present a robust and reliable computational method for tag-to-gene assignment in serial analysis of gene expression (SAGE). The method relies on current genome information and annotation, incorporation of several new features, and key improvements over alternative methods, all of which are important to determine gene expression levels more accurately. The method provides a complete annotation of potential virtual SAGE tags within a genome, along with an estimation of their confidence for experimental observation that ranks tags that present multiple matches in the genome. Results We applied this method to the Saccharomyces cerevisiae genome, producing the most thorough and accurate annotation of potential virtual SAGE tags that is available today for this organism. The usefulness of this method is exemplified by the significant reduction of ambiguous cases in existing experimental SAGE data. In addition, we report new insights from the analysis of existing SAGE data. First, we found that experimental SAGE tags mapping onto introns, intron-exon boundaries, and non-coding RNA elements are observed in all available SAGE data. Second, a significant fraction of experimental SAGE tags was found to map onto genomic regions currently annotated as intergenic. Third, a significant number of existing experimental SAGE tags for yeast has been derived from truncated cDNAs, which are synthesized through oligo-d(T) priming to internal poly-(A) regions during reverse transcription. Conclusion We conclude that an accurate and unambiguous tag mapping process is essential to increase the quality and the amount of information that can be extracted from SAGE experiments. This is supported by the results obtained here and also by the large impact that the erroneous interpretation of these data could have on downstream applications. PMID:17083742

  15. Pole Photogrammetry with AN Action Camera for Fast and Accurate Surface Mapping

    NASA Astrophysics Data System (ADS)

    Gonçalves, J. A.; Moutinho, O. F.; Rodrigues, A. C.

    2016-06-01

    High resolution and high accuracy terrain mapping can provide height change detection for studies of erosion, subsidence or land slip. A UAV flying at a low altitude above the ground, with a compact camera, acquires images with resolution appropriate for these change detections. However, there may be situations where different approaches may be needed, either because higher resolution is required or the operation of a drone is not possible. Pole photogrammetry, where a camera is mounted on a pole, pointing to the ground, is an alternative. This paper describes a very simple system of this kind, created for topographic change detection, based on an action camera. These cameras have high quality and very flexible image capture. Although radial distortion is normally high, it can be treated in an auto-calibration process. The system is composed by a light aluminium pole, 4 meters long, with a 12 megapixel GoPro camera. Average ground sampling distance at the image centre is 2.3 mm. The user moves along a path, taking successive photos, with a time lapse of 0.5 or 1 second, and adjusting the speed in order to have an appropriate overlap, with enough redundancy for 3D coordinate extraction. Marked ground control points are surveyed with GNSS for precise georeferencing of the DSM and orthoimage that are created by structure from motion processing software. An average vertical accuracy of 1 cm could be achieved, which is enough for many applications, for example for soil erosion. The GNSS survey in RTK mode with permanent stations is now very fast (5 seconds per point), which results, together with the image collection, in a very fast field work. If an improved accuracy is needed, since image resolution is 1/4 cm, it can be achieved using a total station for the control point survey, although the field work time increases.

  16. Central auditory processing during chronic tinnitus as indexed by topographical maps of the mismatch negativity obtained with the multi-feature paradigm.

    PubMed

    Mahmoudian, Saeid; Farhadi, Mohammad; Najafi-Koopaie, Mojtaba; Darestani-Farahani, Ehsan; Mohebbi, Mehrnaz; Dengler, Reinhard; Esser, Karl-Heinz; Sadjedi, Hamed; Salamat, Behrouz; Danesh, Ali A; Lenarz, Thomas

    2013-08-21

    This study aimed to compare the neural correlates of acoustic stimulus representation in the auditory sensory memory on an automatic basis between tinnitus subjects and normal hearing (NH) controls, using topographical maps of the MMNs obtained with the multi-feature paradigm. A new and faster paradigm was adopted to look for differences between 2 groups of subjects. Twenty-eight subjects with chronic subjective idiopathic tinnitus and 33 matched healthy controls were included in the study. Brain electrical activity mapping of multi-feature MMN paradigm was recorded from 32 surface scalp electrodes. Three MMN parameters for five deviants consisting frequency, intensity, duration, location and silent gap were compared between the two groups. The MMN amplitude, latency and area under the curve over a region of interest comprising: F3, F4, Fz, FC3, FC4, FCz, and Cz were computed to provide better signal to noise ratio. These three measures could differentiate the cognitive processing disturbances in tinnitus sufferers. The MMN topographic maps revealed significant differences in amplitude and area under the curve for frequency, duration and silent gap deviants in tinnitus subjects compared to NH controls. The current study provides electrophysiological evidence supporting the theory that the pre-attentive and automatic central auditory processing is impaired in individuals with chronic tinnitus. Considering the advantages offered by the MMN paradigm used here, these data might be a useful reference point for the assessment of sensory memory in tinnitus patients and it can be applied with reliability and success in treatment monitoring.

  17. Using satellite vegetation and compound topographic indices to map highly erodible cropland buffers for cellulosic biofuel crop developments in eastern Nebraska, USA

    USGS Publications Warehouse

    Gu, Yingxin; Wylie, Bruce K.

    2015-01-01

    Cultivating annual row crops in high topographic relief waterway buffers has negative environmental effects and can be environmentally unsustainable. Growing perennial grasses such as switchgrass (Panicum virgatum L.) for biomass (e.g., cellulosic biofuel feedstocks) instead of annual row crops in these high relief waterway buffers can improve local environmental conditions (e.g., reduce soil erosion and improve water quality through lower use of fertilizers and pesticides) and ecosystem services (e.g., minimize drought and flood impacts on production; improve wildlife habitat, plant vigor, and nitrogen retention due to post-senescence harvest for cellulosic biofuels; and serve as carbon sinks). The main objectives of this study are to: (1) identify cropland areas with high topographic relief (high runoff potentials) and high switchgrass productivity potential in eastern Nebraska that may be suitable for growing switchgrass, and (2) estimate the total switchgrass production gain from the potential biofuel areas. Results indicate that about 140,000 hectares of waterway buffers in eastern Nebraska are suitable for switchgrass development and the total annual estimated switchgrass biomass production for these suitable areas is approximately 1.2 million metric tons. The resulting map delineates high topographic relief croplands and provides useful information to land managers and biofuel plant investors to make optimal land use decisions regarding biofuel crop development and ecosystem service optimization in eastern Nebraska.

  18. Topographic Map of Quadrangles 3666 and 3766, Balkh (219), Mazar-I-Sharif (220), Qarqin (213), and Hazara Toghai (214) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  19. Topographic Map of Quadrangles 3770 and 3870, Maymayk (211), Jamarj-I-Bala (212), Faydz-Abad (217), and Parkhaw (218) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  20. Topographic Map of Quadrangles 3460 and 3360, Kol-I-Namaksar (407), Ghuryan (408), Kawir-I-Naizar (413), and Kohe-Mahmudo-Esmailjan (414) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  1. Topographic Map of Quadrangles 3560 and 3562, Sir-Band (402), Khawja-Jir (403), and Bala-Murghab (404) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  2. Topographic Map of Quadrangles 3260 and 3160, Dasht-E-Chahe-Mazar (419), Anardara (420), Asparan (601), and Kang (602) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  3. Topographic Map of Quadrangle 3470 and the Northern Edge of 3370, Jalal-Abad (511), Chaghasaray (512), and Northernmost Jaji-Maydan (517) Quadrangles, Afg

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  4. Topographic Map of Quadrangles 3168 and 3268, Yahya-Wona (703), Wersek (704), Khayr-Kot (521), and Urgon (522) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  5. Topographic Map of Quadrangle 3368 and Part of Quadrangle 3370, Ghazni (515), Gardez (516), and Jaji-Maydan (517) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  6. Topographic Map of Quadrangles 3060 and 2960, Qala-I-Fath (608), Malek-Sayh-Koh (613), and Gozar-E-Sah (614) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  7. Topographic Map of Quadrangles 3764 and 3664, Jalajin (117), Kham-Ab (118), Char Shangho (123), and Sheberghan (124) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  8. The potential of more accurate InSAR covariance matrix estimation for land cover mapping

    NASA Astrophysics Data System (ADS)

    Jiang, Mi; Yong, Bin; Tian, Xin; Malhotra, Rakesh; Hu, Rui; Li, Zhiwei; Yu, Zhongbo; Zhang, Xinxin

    2017-04-01

    Synthetic aperture radar (SAR) and Interferometric SAR (InSAR) provide both structural and electromagnetic information for the ground surface and therefore have been widely used for land cover classification. However, relatively few studies have developed analyses that investigate SAR datasets over richly textured areas where heterogeneous land covers exist and intermingle over short distances. One of main difficulties is that the shapes of the structures in a SAR image cannot be represented in detail as mixed pixels are likely to occur when conventional InSAR parameter estimation methods are used. To solve this problem and further extend previous research into remote monitoring of urban environments, we address the use of accurate InSAR covariance matrix estimation to improve the accuracy of land cover mapping. The standard and updated methods were tested using the HH-polarization TerraSAR-X dataset and compared with each other using the random forest classifier. A detailed accuracy assessment complied for six types of surfaces shows that the updated method outperforms the standard approach by around 9%, with an overall accuracy of 82.46% over areas with rich texture in Zhuhai, China. This paper demonstrates that the accuracy of land cover mapping can benefit from the 3 enhancement of the quality of the observations in addition to classifiers selection and multi-source data ingratiation reported in previous studies.

  9. Forest Tree Species Distribution Mapping Using Landsat Satellite Imagery and Topographic Variables with the Maximum Entropy Method in Mongolia

    NASA Astrophysics Data System (ADS)

    Hao Chiang, Shou; Valdez, Miguel; Chen, Chi-Farn

    2016-06-01

    Forest is a very important ecosystem and natural resource for living things. Based on forest inventories, government is able to make decisions to converse, improve and manage forests in a sustainable way. Field work for forestry investigation is difficult and time consuming, because it needs intensive physical labor and the costs are high, especially surveying in remote mountainous regions. A reliable forest inventory can give us a more accurate and timely information to develop new and efficient approaches of forest management. The remote sensing technology has been recently used for forest investigation at a large scale. To produce an informative forest inventory, forest attributes, including tree species are unavoidably required to be considered. In this study the aim is to classify forest tree species in Erdenebulgan County, Huwsgul province in Mongolia, using Maximum Entropy method. The study area is covered by a dense forest which is almost 70% of total territorial extension of Erdenebulgan County and is located in a high mountain region in northern Mongolia. For this study, Landsat satellite imagery and a Digital Elevation Model (DEM) were acquired to perform tree species mapping. The forest tree species inventory map was collected from the Forest Division of the Mongolian Ministry of Nature and Environment as training data and also used as ground truth to perform the accuracy assessment of the tree species classification. Landsat images and DEM were processed for maximum entropy modeling, and this study applied the model with two experiments. The first one is to use Landsat surface reflectance for tree species classification; and the second experiment incorporates terrain variables in addition to the Landsat surface reflectance to perform the tree species classification. All experimental results were compared with the tree species inventory to assess the classification accuracy. Results show that the second one which uses Landsat surface reflectance coupled

  10. Mapping of Inner and Outer Celestial Bodies Using New Global and Local Topographic Data Derived from Photogrammetric Image Processing

    NASA Astrophysics Data System (ADS)

    Karachevtseva, I. P.; Kokhanov, A. A.; Rodionova, J. F.; Zharkova, A. Yu.; Lazareva, M. S.

    2016-06-01

    New estimation of fundamental geodetic parameters and global and local topography of planets and satellites provide basic coordinate systems for mapping as well as opportunities for studies of processes on their surfaces. The main targets of our study are Europa, Ganymede, Calisto and Io (satellites of Jupiter), Enceladus (a satellite of Saturn), terrestrial planetary bodies, including Mercury, the Moon and Phobos, one of the Martian satellites. In particular, based on new global shape models derived from three-dimensional control point networks and processing of high-resolution stereo images, we have carried out studies of topography and morphology. As a visual representation of the results, various planetary maps with different scale and thematic direction were created. For example, for Phobos we have produced a new atlas with 43 maps, as well as various wall maps (different from the maps in the atlas by their format and design): basemap, topography and geomorphological maps. In addition, we compiled geomorphologic maps of Ganymede on local level, and a global hypsometric Enceladus map. Mercury's topography was represented as a hypsometric globe for the first time. Mapping of the Moon was carried out using new images with super resolution (0.5-1 m/pixel) for activity regions of the first Soviet planetary rovers (Lunokhod-1 and -2). New results of planetary mapping have been demonstrated to the scientific community at planetary map exhibitions (Planetary Maps Exhibitions, 2015), organized by MExLab team in frame of the International Map Year, which is celebrated in 2015-2016. Cartographic products have multipurpose applications: for example, the Mercury globe is popular for teaching and public outreach, the maps like those for the Moon and Phobos provide cartographic support for Solar system exploration.

  11. Using ground-based geophysics to rapidly and accurately map sub-surface acidity

    NASA Astrophysics Data System (ADS)

    Wong, Vanessa; Triantafilis, John; Johnston, Scott; Nhan, Terence; Page, Donald; Wege, Richard; Hirst, Phillip; Slavich, Peter

    2013-04-01

    sulfuric and sulfidic layers (oxidised and reduced ASS), acidic shallow groundwater, and features of the infilled palaeovalley (Triantafilis et al. 2012). Accurate soil maps with high spatial resolution are required to develop appropriate management strategies for ASS and other soil types associated with low-lying coastal floodplains. The classes identified in this study form sensible soil management zones across the study area related to defined geomorphic units. EM data can then be used to build below-ground 3D models to inform practical targeted management strategies on coastal floodplains to improve land and water quality outcomes. References Triantafilis J, Wong V, Santos FAM, Page D, Wege R (2012) Modeling the electrical conductivity of hydrogeological strata using joint-inversion of loop-loop electromagnetic data. Geophysics 77(4): WB99-WB107

  12. History of the topographic branch (division)

    USGS Publications Warehouse

    Evans, Richard T.; Frye, Helen M.

    2009-01-01

    the Pacific Coast. These expeditions were sent out by the War Department and were in charge of Army officers. It is interesting to note that such generals as George G. Meade, J.C. Fremont, Joseph E. Johnston, W.F. Smith, John Pope, A.W. Whipple, J.G. Parke, G.K. Warren, and H.L. Abbott, all officers of the Corps of Topographic Engineers, had charge of expeditions and were among our earliest map makers. Unfortunately, the data obtained by these editions were not of sufficient accuracy to serve as a basis for topographic maps of value other than in illustrating their voluminous reports. During this early period, numerous surveys were undertaken within the original Thirteen States, by the Federal government and by the States. The most important were those carried on by the U.S. Coast and Geodetic Survey, which made an accurate survey of the Atlantic Coastline and established a triangulation system that was of so high a standard as to constitute the first and only accurate data for topographic mapping obtained before the Civil War. The Coast and Geodetic Survey, while charting the coast and rivers, also mapped a strip of country extending a few miles inland, the relief being shown by means of hachures, together with contour lines, until 1846 when the first government topographic map on which the relief was shown by contours alone was made, covering an area in the vicinity of Boston Harbor. In 1835, however, the Geological and Topographical Survey of Maryland had issued a map on which the relief was shown by contours, and this is believed to be the first contoured map issued in this country. The outbreak of the Civil War stopped all mapping activities other than those needed by the U.S. Army. During the war, topographic surveys were carried on throughout the war zone under the supervision of the Corps of Engineers, the topographers being civilian employees. After the war, the country west of the Mississippi again became the center of the mapping activities

  13. Accurate determination of succinimide degradation products using high fidelity trypsin digestion peptide map analysis.

    PubMed

    Yu, X Christopher; Joe, Koman; Zhang, Yu; Adriano, Andrea; Wang, Yaning; Gazzano-Santoro, Helene; Keck, Rodney G; Deperalta, Galahad; Ling, Victor

    2011-08-01

    We report an efficient, high fidelity trypsin digestion method for peptide map analysis. This method minimizes artifacts caused by the sample preparation process, and we show its utility for the accurate determination of succinimide formation in a degraded monoclonal antibody product. A basic charge variant was detected by imaged capillary isoelectric focusing and was shown with reduced antigen binding and biological activity. Samples were reduced under denaturing conditions at pH 5.0, and digestion of the reduced protein with porcine trypsin was performed at pH 7.0 for 1 h. Following reversed phase high-performance liquid chromatography and online mass spectrometric analysis, succinimide formation was identified at Asp30 in the light chain. This result contrasts with the observation of only iso-Asp and Asp residues under conventional sample preparation conditions, which are therefore concluded to be artificially generated. The Asp30 residue is seen in the cocrystal structure model to participate in favorable charge interaction with an antigen molecule. Formation of succinimide and the resulting loss of negative charge are therefore hypothesized to be the degradation mechanism. After treatment of the degraded antibody sample to mildly alkaline pH conditions, we observed only Asp residue as the succinimide hydrolysis product and concurrent recovery of biological activity.

  14. Rapid infrared mapping for highly accurate automated histology in Barrett's oesophagus.

    PubMed

    Old, O J; Lloyd, G R; Nallala, J; Isabelle, M; Almond, L M; Shepherd, N A; Kendall, C A; Shore, A C; Barr, H; Stone, N

    2016-10-07

    Barrett's oesophagus (BE) is a premalignant condition that can progress to oesophageal adenocarcinoma. Endoscopic surveillance aims to identify potential progression at an early, treatable stage, but generates large numbers of tissue biopsies. Fourier transform infrared (FTIR) mapping was used to develop an automated histology tool for detection of BE and Barrett's neoplasia in tissue biopsies. 22 oesophageal tissue samples were collected from 19 patients. Contiguous frozen tissue sections were taken for pathology review and FTIR imaging. 45 mid-IR images were measured on an Agilent 620 FTIR microscope with an Agilent 670 spectrometer. Each image covering a 140 μm × 140 μm region was measured in 5 minutes, using a 1.1 μm(2) pixel size and 64 scans per pixel. Principal component fed linear discriminant analysis was used to build classification models based on spectral differences, which were then tested using leave-one-sample-out cross validation. Key biochemical differences were identified by their spectral signatures: high glycogen content was seen in normal squamous (NSQ) tissue, high glycoprotein content was observed in glandular BE tissue, and high DNA content in dysplasia/adenocarcinoma samples. Classification of normal squamous samples versus 'abnormal' samples (any stage of Barrett's) was performed with 100% sensitivity and specificity. Neoplastic Barrett's (dysplasia or adenocarcinoma) was identified with 95.6% sensitivity and 86.4% specificity. Highly accurate pathology classification can be achieved with FTIR measurement of frozen tissue sections in a clinically applicable timeframe.

  15. Topographical atlas sheets

    USGS Publications Warehouse

    Wheeler, George Montague

    1877-01-01

    The following topographical atlas maps, published during the year, accompany the copies of Appendix N.N. of the Annual Report of the Chief of Engineers for 1877, beinig Annual Report of Lieut. Geo. M. Wheeler, Corps of Engineers, in charge of U. S. Geographical Surveys, are in continuation of the series ninety-five in number, on a scale of 1 inch to 8 miles, embracing the territory of the United States lying west of the 100th meridian.

  16. Application of new GPS aircraft control/display system to topographic mapping of the Greenland ice cap

    NASA Technical Reports Server (NTRS)

    Wright, C. W.

    1992-01-01

    A new PC-based GPS flight management display system (GFMS) was developed for Greenland ice cap mapping during the NASA Greenland Ice Sheet mapping experiment, when a total of nine flights were made over four different flight tracks, of which two coincided with ground tracks of the ERS altimeter satellite. In this system, the GFMS inputs the GPS position data to a PC, which generates aircraft automatic pilot steering commands and a cockpit display. The display includes (1) the course deviation indicators for cross-track error and altitude, (2) the flight plan and waypoint map overlay oriented to the aircraft, and (3) various other mission-pertinent numerical data.

  17. Topographic EXAFS.

    DTIC Science & Technology

    1983-11-01

    Warrington WA4 4AD 88 12 1 2 01 2 TOPOGRAPHIC EXAFS Technical Report for Office of Naval Research Contract N00014-83-K-O468 November i983 This document...the abstract shall end with Sa. CONTRACT OR GRANT NUMBER: If eppropriate, enter en indication of the military security classification of the in- the...applicable number of the contract or grant under which formation in the paragraph, represented as (IS). (S). (C). or (U) the report was written. There

  18. Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model

    PubMed Central

    Li, Zhen; Zhang, Renyu

    2017-01-01

    Motivation Protein contacts contain key information for the understanding of protein structure and function and thus, contact prediction from sequence is an important problem. Recently exciting progress has been made on this problem, but the predicted contacts for proteins without many sequence homologs is still of low quality and not very useful for de novo structure prediction. Method This paper presents a new deep learning method that predicts contacts by integrating both evolutionary coupling (EC) and sequence conservation information through an ultra-deep neural network formed by two deep residual neural networks. The first residual network conducts a series of 1-dimensional convolutional transformation of sequential features; the second residual network conducts a series of 2-dimensional convolutional transformation of pairwise information including output of the first residual network, EC information and pairwise potential. By using very deep residual networks, we can accurately model contact occurrence patterns and complex sequence-structure relationship and thus, obtain higher-quality contact prediction regardless of how many sequence homologs are available for proteins in question. Results Our method greatly outperforms existing methods and leads to much more accurate contact-assisted folding. Tested on 105 CASP11 targets, 76 past CAMEO hard targets, and 398 membrane proteins, the average top L long-range prediction accuracy obtained by our method, one representative EC method CCMpred and the CASP11 winner MetaPSICOV is 0.47, 0.21 and 0.30, respectively; the average top L/10 long-range accuracy of our method, CCMpred and MetaPSICOV is 0.77, 0.47 and 0.59, respectively. Ab initio folding using our predicted contacts as restraints but without any force fields can yield correct folds (i.e., TMscore>0.6) for 203 of the 579 test proteins, while that using MetaPSICOV- and CCMpred-predicted contacts can do so for only 79 and 62 of them, respectively. Our contact

  19. The use of historical topographic maps in the study of forest-cover changes in Southern Romania

    NASA Astrophysics Data System (ADS)

    Imecs, Zoltán; Bartos-Elekes, Zsombor; Timár, Gábor; Magyari-Sáska, Zsolt

    2014-05-01

    In the post-communist period the term "deforestation" becomes well known in Romania. By the middle of 19th-century more than 27% of the country was covered by forests, but since then certain changes took place in this respect. The study of the phenomena can be done by the help of maps. In this regard it is very important to have old maps which can emphasize the situation from the past. As the map of Southern Romania, made about Walachia in 1864, called Charta României Meridionale is now georeferenced and accessible on the web, it can be used as a basis for such studies. Researchers are now able to make quantitative studies. In our poster we made a study of two different regions from Southern Romania: one from a mountain region and one from a plain region. Both are in the basin of Argeş river, tributary of Danube. The mountain region lies in the upper basin of Argeş river which is now occupied Vidraru artificial lake. The plain region lies on wetland and today is a natural reserve. The study regions have almost the same size (about 400 km2). In order to follow the evolution in time of the forest cover we used four data sources which covers a period of more than 150 years: Charta României Meridionale (the survey was made between 1855 and 1859); Lambert-Cholesky maps (the survey was made at the end of the 19th century); Gauss-Krüger maps (from the 1960s) and orthophotographs made in 2005. All these materials are georeferenced. With the help of GIS software we digitized the areas covered by forests in both regions. The areas were determined and compared. Using GIS techniques we can overlap the areas covered by forests, the illustrations were made this way. As a conclusion we can say that the plain region suffered important changes as the natural landscape turns into an agricultural-human landscape in the first part of the 20th century. We can say that the actual forest is preserved only because now it is a protected area. In the mountain region the territory was

  20. Aerial radiometric and magnetic survey: Marysvale detail survey, Richfield National Topographic Map sheet, Utah. Volume IV. Graphic data maps. Final report

    SciTech Connect

    Not Available

    1982-01-01

    The results of the analyses of a systematic airborne gamma radiation and total magnetic survey for the area identified as Marysvale, located in southwestern Utah, is presented in Volumes I-IV of this report. The airborne data gathered is reduced by ground computer facilities to yield profile plots of the equivalent uranium, thorium and potassium gamma radiation intensities, the ratios of these intensities, the total gamma radiation counting rate and the earth's residual magnetic field intensity. Profile plots of the aircraft's altitude above the earth's surface, the ambient temperature and pressure, and the magnetic field data measured by a base station magnetometer is presented also. An evaluation of the distribution of the radiometric data in terms of its established geochemical map units, which were derived via geochemical analysis methods, for the entire survey area has been prepared and is included. The determination of the geochemical units presented has been established principally from the analysis of the radiometric and magnetic contour maps and, more importantly, the multi-variate analysis map. A general description of the area, including descriptions of the various geologic and geochemical units, is included within the text. Volume IV contains the following maps at a scale of 1:62,500/sup 0/; flight line base maps; radiometric and magnetic contour maps; multi-variate analysis maps; geochemical analysis maps; geochemical composite maps.

  1. Comparative lahar hazard mapping at Volcan Citlaltépetl, Mexico using SRTM, ASTER and DTED-1 digital topographic data

    USGS Publications Warehouse

    Hubbard, Bernard E.; Sheridan, Michael F.; Carrasco-Nunez, Gerardo; Diaz-Castellon, Rodolfo; Rodriguez, Sergio R.

    2007-01-01

    Finally, ASTERs 60 km swath width and 8% duty cycle presents a challenge for mapping lahar inundation hazards at E–W oriented stream valleys in low-latitude areas with persistent cloud cover. However, its continued operations enhances its utility as a means for updating the continuous but one-time coverage of SRTM, and for filling voids in the SRTM dataset such as those that occur along steep-sided valleys prone to hazards from future lahars.

  2. EphA3 Expressed in the Chicken Tectum Stimulates Nasal Retinal Ganglion Cell Axon Growth and Is Required for Retinotectal Topographic Map Formation

    PubMed Central

    Rapacioli, Melina; Salierno, Marcelo; Etchenique, Roberto; Flores, Vladimir; Sanchez, Viviana; Carri, Néstor Gabriel; Scicolone, Gabriel

    2012-01-01

    Background Retinotopic projection onto the tectum/colliculus constitutes the most studied model of topographic mapping and Eph receptors and their ligands, the ephrins, are the best characterized molecular system involved in this process. Ephrin-As, expressed in an increasing rostro-caudal gradient in the tectum/colliculus, repel temporal retinal ganglion cell (RGC) axons from the caudal tectum and inhibit their branching posterior to their termination zones. However, there are conflicting data regarding the nature of the second force that guides nasal axons to invade and branch only in the caudal tectum/colliculus. The predominant model postulates that this second force is produced by a decreasing rostro-caudal gradient of EphA7 which repels nasal optic fibers and prevents their branching in the rostral tectum/colliculus. However, as optic fibers invade the tectum/colliculus growing throughout this gradient, this model cannot explain how the axons grow throughout this repellent molecule. Methodology/Principal Findings By using chicken retinal cultures we showed that EphA3 ectodomain stimulates nasal RGC axon growth in a concentration dependent way. Moreover, we showed that nasal axons choose growing on EphA3-expressing cells and that EphA3 diminishes the density of interstitial filopodia in nasal RGC axons. Accordingly, in vivo EphA3 ectodomain misexpression directs nasal optic fibers toward the caudal tectum preventing their branching in the rostral tectum. Conclusions We demonstrated in vitro and in vivo that EphA3 ectodomain (which is expressed in a decreasing rostro-caudal gradient in the tectum) is necessary for topographic mapping by stimulating the nasal axon growth toward the caudal tectum and inhibiting their branching in the rostral tectum. Furthermore, the ability of EphA3 of stimulating axon growth allows understanding how optic fibers invade the tectum growing throughout this molecular gradient. Therefore, opposing tectal gradients of repellent ephrin

  3. Rapid and Accurate T2 Mapping from Multi Spin Echo Data Using Bloch-Simulation-Based Reconstruction

    PubMed Central

    Ben-Eliezer, Noam; Sodickson, Daniel K; Block, Tobias Kai

    2014-01-01

    Purpose Quantitative T2-relaxation-based contrast has the potential to provide valuable clinical information. Practical T2-mapping, however, is impaired either by prohibitively long acquisition times or by contamination of fast multi-echo protocols by stimulated and indirect echoes. This work presents a novel post-processing approach aiming to overcome the common penalties associated with multi-echo protocols, and enabling rapid and accurate mapping of T2 relaxation values. Methods Bloch simulations are used to estimate the actual echo modulation curve (EMC) in a multi spin-echo experiment. Simulations are repeated for a range of T2 values and transmit field scales, yielding a database of simulated EMCs, which is then used to identify the T2 value whose EMC most closely matches the experimentally measured data at each voxel. Results T2 maps of both phantom and in vivo scans were successfully reconstructed, closely matching maps produced from single spin-echo data. Results were consistent over the physiological range of T2 values and across different experimental settings. Conclusion The proposed technique allows accurate T2 mapping in clinically feasible scan times, free of user- and scanner-dependent variations, while providing a comprehensive framework that can be extended to model other parameters (e.g., T1, B1+, B0, diffusion) and support arbitrary acquisition schemes. PMID:24648387

  4. Topographic pharmaco-EEG mapping of the effects of the South American psychoactive beverage ayahuasca in healthy volunteers

    PubMed Central

    Riba, Jordi; Anderer, Peter; Morte, Adelaida; Urbano, Gloria; Jané, Francesc; Saletu, Bernd; Barbanoj, Manel J

    2002-01-01

    Aims Ayahuasca is a traditional South American psychoactive beverage used in Amazonian shamanism, and in the religious ceremonies of Brazilian-based syncretic religious groups with followers in the US and several European countries. This tea contains measurable amounts of the psychotropic indole N,N-dimethyltryptamine (DMT), and β-carboline alkaloids with MAO-inhibiting properties. In a previous report we described a profile of stimulant and psychedelic effects for ayahuasca as measured by subjective report self-assessment instruments. In the present study the cerebral bioavailability and time-course of effects of ayahuasca were assessed in humans by means of topographic quantitative-electroencephalography (q-EEG), a noninvasive method measuring drug-induced variations in brain electrical activity. Methods Two doses (one low and one high) of encapsulated freeze-dried ayahuasca, equivalent to 0.6 and 0.85 mg DMT kg−1 body weight, were administered to 18 healthy volunteers with previous experience in psychedelic drug use in a double-blind crossover placebo-controlled clinical trial. Nineteen-lead recordings were undertaken from baseline to 8 h after administration. Subjective effects were measured by means of the Hallucinogen Rating Scale (HRS). Results Ayahuasca induced a pattern of psychoactive effects which resulted in significant dose-dependent increases in all subscales of the HRS, and in significant and dose-dependent modifications of brain electrical activity. Absolute power decreased in all frequency bands, most prominently in the theta band. Mean absolute power decreases (95% CI) at a representative lead (P3) 90 min after the high dose were −20.20±15.23 µV2 and −2.70±2.21 µV2 for total power and theta power, respectively. Relative power decreased in the delta (−1.20±1.31% after 120 min at P3) and theta (−3.30±2.59% after 120 min at P3) bands, and increased in the beta band, most prominently in the faster beta-3 (1.00±0.88% after 90 min at P

  5. Topographical amnesia.

    PubMed Central

    De Renzi, E; Faglioni, P; Villa, P

    1977-01-01

    The ability to learn to criterion a visually-guided stylus maze was found impaired in patients with right posterior cerebral damage, not only in comparison with controls but also with other hemisphere-damaged groups. The contribution of the corresponding left sided area to this task is dubious, and certainly not substantial. This finding points to the independent organisation of long-term spatial memory in the right posterior cerebral cortex, an inference that was further supported by the study of two cases. The first was a female patient with right temporo-parietal softening (as suggested by clinical, EEG, and brain scan data) who showed topographical amnesia and inability to learn the visual maze over 275 trials. On an extensive battery of tests she was found free from disorders of space perception, and from verbal and visual memory impairment. The second was a patient presenting with severe global amnesia who, nevertheless, had no difficulty in route finding, and reached the criterion on the maze in 31 trials. PMID:894320

  6. Visualizing the Subsurface of Soft Matter: Simultaneous Topographical Imaging, Depth Modulation, and Compositional Mapping with Triple Frequency Atomic Force Microscopy

    NASA Astrophysics Data System (ADS)

    Solares, Santiago; Ebeling, Daniel; Eslami, Babak

    2014-03-01

    Characterization of subsurface morphology and mechanical properties with nanoscale resolution and depth control is of significant interest in soft matter fields like biology and polymer science, where buried structural and compositional features can be important. However, controllably ``feeling'' the subsurface is a challenging task for which the available imaging tools are relatively limited. This presentation describes a trimodal atomic force microscopy (AFM) imaging scheme, whereby three eigenmodes of the microcantilever probe are used as separate control ``knobs'' to simultaneously measure the topography, modulate sample indentation by the tip during tip-sample impact, and map compositional contrast, respectively. This method is illustrated through computational simulation and experiments conducted on ultrathin polymer films with embedded glass nanoparticles. By actively increasing the tip-sample indentation using a higher eigenmode of the cantilever, one is able to gradually and controllably reveal glass nanoparticles that are buried tens of nanometers deep under the surface, while still being able to refocus on the surface. The authors gratefully acknowledge support from the U.S. Department of Energy (conceptual method development and experimental work, award DESC-0008115) and the U.S. National Science Foundation (computational work, award CMMI-0841840).

  7. Topographic prominence as a method for cluster identification in single-molecule localisation data.

    PubMed

    Griffié, Juliette; Boelen, Lies; Burn, Garth; Cope, Andrew P; Owen, Dylan M

    2015-11-01

    Single-molecule localisation based super-resolution fluorescence imaging produces maps of the coordinates of fluorescent molecules in a region of interest. Cluster analysis algorithms provide information concerning the clustering characteristics of these molecules, often through the generation of cluster heat maps based on local molecular density. The goal of this study was to generate a new cluster analysis method based on a topographic approach. In particular, a topographic map of the level of clustering across a region is generated based on Getis' variant of Ripley's K-function. By using the relative heights (topographic prominence, TP) of the peaks in the map, cluster characteristics can be identified more accurately than by using previously demonstrated height thresholds. Analogous to geological TP, the concepts of wet and dry TP and topographic isolation are introduced to generate binary maps. The algorithm is validated using simulated and experimental data and found to significantly outperform previous cluster identification methods. Illustration of the topographic prominence based cluster analysis algorithm.

  8. Accurate model annotation of a near-atomic resolution cryo-EM map

    PubMed Central

    Hryc, Corey F.; Chen, Dong-Hua; Afonine, Pavel V.; Jakana, Joanita; Wang, Zhao; Haase-Pettingell, Cameron; Jiang, Wen; Adams, Paul D.; King, Jonathan A.; Schmid, Michael F.; Chiu, Wah

    2017-01-01

    Electron cryomicroscopy (cryo-EM) has been used to determine the atomic coordinates (models) from density maps of biological assemblies. These models can be assessed by their overall fit to the experimental data and stereochemical information. However, these models do not annotate the actual density values of the atoms nor their positional uncertainty. Here, we introduce a computational procedure to derive an atomic model from a cryo-EM map with annotated metadata. The accuracy of such a model is validated by a faithful replication of the experimental cryo-EM map computed using the coordinates and associated metadata. The functional interpretation of any structural features in the model and its utilization for future studies can be made in the context of its measure of uncertainty. We applied this protocol to the 3.3-Å map of the mature P22 bacteriophage capsid, a large and complex macromolecular assembly. With this protocol, we identify and annotate previously undescribed molecular interactions between capsid subunits that are crucial to maintain stability in the absence of cementing proteins or cross-linking, as occur in other bacteriophages. PMID:28270620

  9. Accurate model annotation of a near-atomic resolution cryo-EM map.

    PubMed

    Hryc, Corey F; Chen, Dong-Hua; Afonine, Pavel V; Jakana, Joanita; Wang, Zhao; Haase-Pettingell, Cameron; Jiang, Wen; Adams, Paul D; King, Jonathan A; Schmid, Michael F; Chiu, Wah

    2017-03-21

    Electron cryomicroscopy (cryo-EM) has been used to determine the atomic coordinates (models) from density maps of biological assemblies. These models can be assessed by their overall fit to the experimental data and stereochemical information. However, these models do not annotate the actual density values of the atoms nor their positional uncertainty. Here, we introduce a computational procedure to derive an atomic model from a cryo-EM map with annotated metadata. The accuracy of such a model is validated by a faithful replication of the experimental cryo-EM map computed using the coordinates and associated metadata. The functional interpretation of any structural features in the model and its utilization for future studies can be made in the context of its measure of uncertainty. We applied this protocol to the 3.3-Å map of the mature P22 bacteriophage capsid, a large and complex macromolecular assembly. With this protocol, we identify and annotate previously undescribed molecular interactions between capsid subunits that are crucial to maintain stability in the absence of cementing proteins or cross-linking, as occur in other bacteriophages.

  10. Motor facilitation during action observation: topographic mapping of the target muscle and influence of the onlooker's posture.

    PubMed

    Urgesi, Cosimo; Candidi, Matteo; Fabbro, Franco; Romani, Michela; Aglioti, Salvatore M

    2006-05-01

    Transcranial magnetic stimulation (TMS) studies report that viewing a given action performed by a model activates the neural representation of the onlooker's muscles that are activated during the actual execution of the observed action. Here we sought to determine whether this mirror observation-execution facilitation reflects only muscular specificity or whether it is also influenced by postural congruency between onlooker/model body parts. We recorded motor potentials evoked by single-pulse TMS from the first dorsal interosseous (FDI) and abductor digiti minimi (ADM) muscles during observation of the right index and little finger abduction/adduction movements of models who kept their hands in a palm-down or palm-up position. Moreover, in different experiments observers kept their right hand palm down or palm up. Selective motor facilitation was observed during observation of movements that map the motor function of the targeted muscles, regardless of the posture of the observed hand. Modulation of FDI, however, was obtained only when participants kept their hand palm down; by contrast, modulation of ADM was obtained only when participants kept their hand palm up. Interestingly, electromyographic recordings showed that FDI is mostly active when index abduction/adduction movements are performed in the palm-down position, whereas ADM is mostly active when little finger abduction/adduction movements are performed in the palm-up position. Results show that the influence of the onlooker's hand posture is comparable in action execution and observation, thus indicating a fine-grain functional correspondence between these two processes.

  11. Topographical mapping of α- and β-keratins on developing chicken skin integuments: Functional interaction and evolutionary perspectives

    PubMed Central

    Wu, Ping; Ng, Chen Siang; Yan, Jie; Lai, Yung-Chih; Chen, Chih-Kuan; Lai, Yu-Ting; Wu, Siao-Man; Chen, Jiun-Jie; Luo, Weiqi; Widelitz, Randall B.; Li, Wen-Hsiung; Chuong, Cheng-Ming

    2015-01-01

    Avian integumentary organs include feathers, scales, claws, and beaks. They cover the body surface and play various functions to help adapt birds to diverse environments. These keratinized structures are mainly composed of corneous materials made of α-keratins, which exist in all vertebrates, and β-keratins, which only exist in birds and reptiles. Here, members of the keratin gene families were used to study how gene family evolution contributes to novelty and adaptation, focusing on tissue morphogenesis. Using chicken as a model, we applied RNA-seq and in situ hybridization to map α- and β-keratin genes in various skin appendages at embryonic developmental stages. The data demonstrate that temporal and spatial α- and β-keratin expression is involved in establishing the diversity of skin appendage phenotypes. Embryonic feathers express a higher proportion of β-keratin genes than other skin regions. In feather filament morphogenesis, β-keratins show intricate complexity in diverse substructures of feather branches. To explore functional interactions, we used a retrovirus transgenic system to ectopically express mutant α- or antisense β-keratin forms. α- and β-keratins show mutual dependence and mutations in either keratin type results in disrupted keratin networks and failure to form proper feather branches. Our data suggest that combinations of α- and β-keratin genes contribute to the morphological and structural diversity of different avian skin appendages, with feather-β-keratins conferring more possible composites in building intrafeather architecture complexity, setting up a platform of morphological evolution of functional forms in feathers. PMID:26598683

  12. Map and Compass Skills for the Secondary School (Understanding Topographic Maps, Developing Compass Skills, and Orienteering). Instructional Activities Series IA/S-18.

    ERIC Educational Resources Information Center

    Larkin, Robert P.

    This activity is one of a series of 17 teacher-developed instructional activities for geography at the secondary-grade level described in SO 009 140. The activity investigates the development of compass skills, map skills, and orienteering. It employs the educational-games approach. Given specific exercises and instructions, students become…

  13. Brain MAPS: an automated, accurate and robust brain extraction technique using a template library

    PubMed Central

    Leung, Kelvin K.; Barnes, Josephine; Modat, Marc; Ridgway, Gerard R.; Bartlett, Jonathan W.; Fox, Nick C.; Ourselin, Sébastien

    2011-01-01

    Whole brain extraction is an important pre-processing step in neuro-image analysis. Manual or semi-automated brain delineations are labour-intensive and thus not desirable in large studies, meaning that automated techniques are preferable. The accuracy and robustness of automated methods are crucial because human expertise may be required to correct any sub-optimal results, which can be very time consuming. We compared the accuracy of four automated brain extraction methods: Brain Extraction Tool (BET), Brain Surface Extractor (BSE), Hybrid Watershed Algorithm (HWA) and a Multi-Atlas Propagation and Segmentation (MAPS) technique we have previously developed for hippocampal segmentation. The four methods were applied to extract whole brains from 682 1.5T and 157 3T T1-weighted MR baseline images from the Alzheimer’s Disease Neuroimaging Initiative database. Semi-automated brain segmentations with manual editing and checking were used as the gold-standard to compare with the results. The median Jaccard index of MAPS was higher than HWA, BET and BSE in 1.5T and 3T scans (p < 0.05, all tests), and the 1st-99th centile range of the Jaccard index of MAPS was smaller than HWA, BET and BSE in 1.5T and 3T scans (p < 0.05, all tests). HWA and MAPS were found to be best at including all brain tissues (median false negative rate ≤ 0.010% for 1.5T scans and ≤ 0.019% for 3T scans, both methods). The median Jaccard index of MAPS were similar in both 1.5T and 3T scans, whereas those of BET, BSE and HWA were higher in 1.5T scans than 3T scans (p < 0.05, all tests). We found that the diagnostic group had a small effect on the median Jaccard index of all four methods. In conclusion, MAPS had relatively high accuracy and low variability compared to HWA, BET and BSE in MR scans with and without atrophy. PMID:21195780

  14. Generating Accurate Urban Area Maps from Nighttime Satellite (DMSP/OLS) Data

    NASA Technical Reports Server (NTRS)

    Imhoff, Marc; Lawrence, William; Elvidge, Christopher

    2000-01-01

    There has been an increasing interest by the international research community to use the nighttime acquired "city-lights" data sets collected by the US Defense Meteorological Satellite Program's Operational Linescan system to study issues relative to urbanization. Many researchers are interested in using these data to estimate human demographic parameters over large areas and then characterize the interactions between urban development , natural ecosystems, and other aspects of the human enterprise. Many of these attempts rely on an ability to accurately identify urbanized area. However, beyond the simple determination of the loci of human activity, using these data to generate accurate estimates of urbanized area can be problematic. Sensor blooming and registration error can cause large overestimates of urban land based on a simple measure of lit area from the raw data. We discuss these issues, show results of an attempt to do a historical urban growth model in Egypt, and then describe a few basic processing techniques that use geo-spatial analysis to threshold the DMSP data to accurately estimate urbanized areas. Algorithm results are shown for the United States and an application to use the data to estimate the impact of urban sprawl on sustainable agriculture in the US and China is described.

  15. Development of base maps' role in soil mapping

    NASA Astrophysics Data System (ADS)

    Miller, Brad; Brevik, Eric

    2014-05-01

    One of the ultimate goals of soil science is the production of accurate soil maps, but historically these thematic maps have relied upon base maps for positional reference and later for parameters that help predict soil properties. This presentation reviews the history of base maps and the dependence of soil mapping on them. The availability of geographic technology for producing these base maps has constrained and directed the geographic study of soil. A lack of accurate methods for determining location limited early geographic description of soils to narratives. The availability of accurate topographic maps in the late 18th century, fueled by governments' interests in documenting national boundaries and popular interest in world atlases, provided the first base maps for soil geographers. These soil maps primarily used the topographic maps as a spatial reference onto which the thematic details were drawn. Due to the late start of a systematic topographic survey in the United States, early Soil Survey maps depended upon plat maps for spatial reference. The adoption of aerial photographs in the process of soil mapping increased the role of base maps as predictive parameters. In the current geospatial revolution, global positioning systems and geographic information systems have nearly replaced the need for base maps to provide spatial reference. Today, base maps are more likely to be used as parameters in landscape models for predicting the spatial distribution of soil properties and classes. As model parameters for digital soil maps, base maps constitute the library of predictive variables and constrain the supported resolution of the soil map. This change in the relationship between base maps and the soil map is a paradigm shift that affects fundamental definitions of geography, such as scale, resolution, and detectable features. These concepts are the essential tools used to study the spatial characteristics of Earth Systems.

  16. Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment

    PubMed Central

    Shevchenko, Anna; Roguev, Assen; Schaft, Daniel; Buchanan, Luke; Habermann, Bianca; Sakalar, Cagri; Thomas, Henrik; Krogan, Nevan J; Shevchenko, Andrej; Stewart, A Francis

    2008-01-01

    Background Understanding the design logic of living systems requires the understanding and comparison of proteomes. Proteomes define the commonalities between organisms more precisely than genomic sequences. Because uncertainties remain regarding the accuracy of proteomic data, several issues need to be resolved before comparative proteomics can be fruitful. Results The Saccharomyces cerevisiae proteome presents the highest quality proteomic data available. To evaluate the accuracy of these data, we intensively mapped a proteomic environment, termed 'Chromatin Central', which encompasses eight protein complexes, including the major histone acetyltransferases and deacetylases, interconnected by twelve proteomic hyperlinks. Using sequential tagging and a new method to eliminate background, we confirmed existing data but also uncovered new subunits and three new complexes, including ASTRA, which we suggest is a widely conserved aspect of telomeric maintenance, and two new variations of Rpd3 histone deacetylase complexes. We also examined the same environment in fission yeast and found a very similar architecture based on a scaffold of orthologues comprising about two-thirds of all proteins involved, whereas the remaining one-third is less constrained. Notably, most of the divergent hyperlinks were found to be due to gene duplications, hence providing a mechanism for the fixation of gene duplications in evolution. Conclusions We define several prerequisites for comparative proteomics and apply them to examine a proteomic environment in unprecedented detail. We suggest that high resolution mapping of proteomic environments will deliver the highest quality data for comparative proteomics. PMID:19040720

  17. An accurate Galactic N(sub H) map of the north ecliptic pole

    NASA Technical Reports Server (NTRS)

    Elvis, Martin; Lockman, Felix J.; Fassnacht, C.

    1994-01-01

    The Galactic HI column density was measured at 21 min angular resolution over an 8 deg x 9 deg region centered on the north ecliptic pole. Over the region N(sub H) varies smoothly between 3 x 10(exp 20) atoms/sq cm and 8 x 10(exp 20) atoms/sq cm; some structure is seen over most of the map on an 0.5 - 1 deg scale. There are other possible sources of interstellar opacity in this direction which may add an equivalent 10(exp 20)/sq cm of HI. We evaluate the effect of uncertainties in the HI column density on implied X-ray fluxes of extragalactic objects.

  18. Oxygen-enhanced MRI accurately identifies, quantifies, and maps tumor hypoxia in preclinical cancer models

    PubMed Central

    O’Connor, James PB; Boult, Jessica KR; Jamin, Yann; Babur, Muhammad; Finegan, Katherine G; Williams, Kaye J; Little, Ross A; Jackson, Alan; Parker, Geoff JM; Reynolds, Andrew R; Waterton, John C; Robinson, Simon P

    2015-01-01

    There is a clinical need for non-invasive biomarkers of tumor hypoxia for prognostic and predictive studies, radiotherapy planning and therapy monitoring. Oxygen enhanced MRI (OE-MRI) is an emerging imaging technique for quantifying the spatial distribution and extent of tumor oxygen delivery in vivo. In OE-MRI, the longitudinal relaxation rate of protons (ΔR1) changes in proportion to the concentration of molecular oxygen dissolved in plasma or interstitial tissue fluid. Therefore, well-oxygenated tissues show positive ΔR1. We hypothesized that the fraction of tumor tissue refractory to oxygen challenge (lack of positive ΔR1, termed “Oxy-R fraction”) would be a robust biomarker of hypoxia in models with varying vascular and hypoxic features. Here we demonstrate that OE-MRI signals are accurate, precise and sensitive to changes in tumor pO2 in highly vascular 786-0 renal cancer xenografts. Furthermore, we show that Oxy-R fraction can quantify the hypoxic fraction in multiple models with differing hypoxic and vascular phenotypes, when used in combination with measurements of tumor perfusion. Finally, Oxy-R fraction can detect dynamic changes in hypoxia induced by the vasomodulator agent hydralazine. In contrast, more conventional biomarkers of hypoxia (derived from blood oxygenation-level dependent MRI and dynamic contrast-enhanced MRI) did not relate to tumor hypoxia consistently. Our results show that the Oxy-R fraction accurately quantifies tumor hypoxia non-invasively and is immediately translatable to the clinic. PMID:26659574

  19. Spatio-temporal assessment of aqueous habitat dynamics at the Danube river floodplain based on historical topographic maps and remote sensing data

    NASA Astrophysics Data System (ADS)

    Farkas-Iványi, Kinga; Mészáros, János; Pásztor, László

    2016-04-01

    The basic requirements of sustainable restoration along rivers is the detection and evaluation of the historical changes in the landscape shaping processes. Identification of historical changes and habitat dynamics are essential criteria for understanding the geomorphological response of the fluvial system to flood discharges. Danube had three main types of channel adjustment in Szigetköz at the border of Hungary and Slovakia; the anabranching river section with medium flow velocity properties, the anastomosing river section with less intensive runoff conditions, and the meandering river section, with slow flow velocity properties. Our aim was to define, which section is the most responsive for near-natural and anthropogenic changes and which is the most stubborn against them, or see if they react in the same way. The parameters of the analysis were fluvial forms, their erosion, types of vegetation and nodes of bars and islands. The analysis was based on georeferenced topographic maps and remote sensing data of eight different dates from the last 200 years. The active channel (AC = main channel + side arms + backwaters + gravel/sand bars) and the habitat composition (HC = % of individual habitat types of AC) were defined for the whole time scale for extracting the most dynamic nodes of the active zone. After we were tracing down the areas of habitat succession and regeneration, by the comparison of adjacent time periods, we concluded that the three different channel types react differently for near-natural changes (e.g. the rejuvenation of the anabranching area was twice intensive than the anastomosing river section before channelization), but react with the same processes (e.g. terrestrialisation) for anthropogenic effects. Our poster will represent these preliminary results besides used datasets and methods.

  20. Topographic Mapping of Brain Activity

    DTIC Science & Technology

    1987-10-01

    electrode. 46 STERNBERG PARADI GM RESPONSE SET ’Positive/Negatlve’ 50Across All Conditions C 5200 Ln 500 ~0 ~480 (D) CD  CLD 440 (D 420 -k -0 0...analysis. Fifteen male subjects were run using two structurally equivalent versions of the oddball task, one semantic (75% exemplars from category BIRD

  1. The South Polar Structure on Vesta from Dawn: Using Geologic, Topographic and Compositional Mapping and Planetary Analogs to Test Origin Models

    NASA Astrophysics Data System (ADS)

    Schenk, P.; Jaumann, R.; Pieters, C. M.; Neukum, G.; Schmedemann, N.; Yingst, R.; Williams, D. A.; Garry, W. B.; Buczkowski, D.; McCord, T. B.; Sykes, M. V.; O'Brien, D. P.; Blewett, D. T.; Asmar, S.; Ermakov, A.; Gaskell, R. W.; Raymond, C. A.; Polanskey, C.; Marchi, S.; Mottola, S.; Prettyman, T. H.; Roatsch, T.; Preusker, F.; Nathues, A.; DeSanctis, C.; McSween, H. Y.; Russell, C. T.

    2011-12-01

    Approach imaging of Vesta by the Dawn spacecraft (Russell et al., 2007) show that the south polar topographic anomaly first observed by HST (Thomas et al., 1997), is a complex and unique geologic structure. A dense set of concentric arcuate, cuspate, and spiral inward-facing scarps and ridges form a coherent ~460-525 km wide annular feature. This region is bounded by a set of asymmetric and discontinuous inward-facing scarps several kilometers high. The center is dominated by a large central mountain ~200 km wide and 10-15 km high. The topography is complex, broadly circular with a large circular extension to one side. Three models for the origin of this structure have been proposed. Key tests of the HST-based large impact model include impact melt and ejecta but approach imagery is not yet of sufficient resolution to unambiguously detect these. Nevertheless, comparison to large impact features on Hyperion, Rhea and Iapetus suggest a basic similarity in planform to the large central mound and arcuate inward-facing scarps on Vesta. Alternatively, the complex interior can be interpreted as the manifestation of a large downwelling mantle plume. Broadly similar structures have been observed on Miranda and Enceladus, although these lack large central mounds. The third model suggests extensive post-impact deformation of a large impact feature. Rapid rotation during impact (Jutzi and Asphaug, 2011) may also explain some of the anomalous features. Impact ejecta and global fracturing may have profoundly altered Vestan geology. Large equatorial troughs may be related to the formation process or post-impact deformation. The confirmation of any of these models and their effects will required the detailed imagery, topography, compositional (VIR and GRaND), geologic and gravity mapping observations planned by Dawn. Preliminary crater counts indicate a possible surface model age of ~3.8 Gyr for the south polar structure. However, the structure is morphologically well preserved

  2. Fast, Accurate and Automatic Ancient Nucleosome and Methylation Maps with epiPALEOMIX.

    PubMed

    Hanghøj, Kristian; Seguin-Orlando, Andaine; Schubert, Mikkel; Madsen, Tobias; Pedersen, Jakob Skou; Willerslev, Eske; Orlando, Ludovic

    2016-12-01

    The first epigenomes from archaic hominins (AH) and ancient anatomically modern humans (AMH) have recently been characterized, based, however, on a limited number of samples. The extent to which ancient genome-wide epigenetic landscapes can be reconstructed thus remains contentious. Here, we present epiPALEOMIX, an open-source and user-friendly pipeline that exploits post-mortem DNA degradation patterns to reconstruct ancient methylomes and nucleosome maps from shotgun and/or capture-enrichment data. Applying epiPALEOMIX to the sequence data underlying 35 ancient genomes including AMH, AH, equids and aurochs, we investigate the temporal, geographical and preservation range of ancient epigenetic signatures. We first assess the quality of inferred ancient epigenetic signatures within well-characterized genomic regions. We find that tissue-specific methylation signatures can be obtained across a wider range of DNA preparation types than previously thought, including when no particular experimental procedures have been used to remove deaminated cytosines prior to sequencing. We identify a large subset of samples for which DNA associated with nucleosomes is protected from post-mortem degradation, and nucleosome positioning patterns can be reconstructed. Finally, we describe parameters and conditions such as DNA damage levels and sequencing depth that limit the preservation of epigenetic signatures in ancient samples. When such conditions are met, we propose that epigenetic profiles of CTCF binding regions can be used to help data authentication. Our work, including epiPALEOMIX, opens for further investigations of ancient epigenomes through time especially aimed at tracking possible epigenetic changes during major evolutionary, environmental, socioeconomic, and cultural shifts.

  3. Fast, Accurate and Automatic Ancient Nucleosome and Methylation Maps with epiPALEOMIX

    PubMed Central

    Hanghøj, Kristian; Seguin-Orlando, Andaine; Schubert, Mikkel; Madsen, Tobias; Pedersen, Jakob Skou; Willerslev, Eske; Orlando, Ludovic

    2016-01-01

    The first epigenomes from archaic hominins (AH) and ancient anatomically modern humans (AMH) have recently been characterized, based, however, on a limited number of samples. The extent to which ancient genome-wide epigenetic landscapes can be reconstructed thus remains contentious. Here, we present epiPALEOMIX, an open-source and user-friendly pipeline that exploits post-mortem DNA degradation patterns to reconstruct ancient methylomes and nucleosome maps from shotgun and/or capture-enrichment data. Applying epiPALEOMIX to the sequence data underlying 35 ancient genomes including AMH, AH, equids and aurochs, we investigate the temporal, geographical and preservation range of ancient epigenetic signatures. We first assess the quality of inferred ancient epigenetic signatures within well-characterized genomic regions. We find that tissue-specific methylation signatures can be obtained across a wider range of DNA preparation types than previously thought, including when no particular experimental procedures have been used to remove deaminated cytosines prior to sequencing. We identify a large subset of samples for which DNA associated with nucleosomes is protected from post-mortem degradation, and nucleosome positioning patterns can be reconstructed. Finally, we describe parameters and conditions such as DNA damage levels and sequencing depth that limit the preservation of epigenetic signatures in ancient samples. When such conditions are met, we propose that epigenetic profiles of CTCF binding regions can be used to help data authentication. Our work, including epiPALEOMIX, opens for further investigations of ancient epigenomes through time especially aimed at tracking possible epigenetic changes during major evolutionary, environmental, socioeconomic, and cultural shifts. PMID:27624717

  4. Visual Mapping of Sedimentary Facies Can Yield Accurate And Geomorphically Meaningful Results at Morphological Unit to River Segment Scales

    NASA Astrophysics Data System (ADS)

    Pasternack, G. B.; Wyrick, J. R.; Jackson, J. R.

    2014-12-01

    Long practiced in fisheries, visual substrate mapping of coarse-bedded rivers is eschewed by geomorphologists for inaccuracy and limited sizing data. Geomorphologists perform time-consuming measurements of surficial grains, with the few locations precluding spatially explicit mapping and analysis of sediment facies. Remote sensing works for bare land, but not vegetated or subaqueous sediments. As visual systems apply the log2 Wentworth scale made for sieving, they suffer from human inability to readily discern those classes. We hypothesized that size classes centered on the PDF of the anticipated sediment size distribution would enable field crews to accurately (i) identify presence/absence of each class in a facies patch and (ii) estimate the relative amount of each class to within 10%. We first tested 6 people using 14 measured samples with different mixtures. Next, we carried out facies mapping for ~ 37 km of the lower Yuba River in California. Finally, we tested the resulting data to see if it produced statistically significant hydraulic-sedimentary-geomorphic results. Presence/absence performance error was 0-4% for four people, 13% for one person, and 33% for one person. The last person was excluded from further effort. For the abundance estimation performance error was 1% for one person, 7-12% for three people, and 33% for one person. This last person was further trained and re-tested. We found that the samples easiest to visually quantify were unimodal and bimodal, while those most difficult had nearly equal amounts of each size. This confirms psychological studies showing that humans have a more difficult time quantifying abundances of subgroups when confronted with well-mixed groups. In the Yuba, mean grain size decreased downstream, as is typical for an alluvial river. When averaged by reach, mean grain size and bed slope were correlated with an r2 of 0.95. At the morphological unit (MU) scale, eight in-channel bed MU types had an r2 of 0.90 between mean

  5. Topographic organizations of taste-responsive neurons in the parabrachial nucleus of C57BL/6J mice: An electrophysiological mapping study.

    PubMed

    Tokita, K; Boughter, J D

    2016-03-01

    The activities of 178 taste-responsive neurons were recorded extracellularly from the parabrachial nucleus (PbN) in the anesthetized C57BL/6J mouse. Taste stimuli included those representative of five basic taste qualities, sweet, salty, sour, bitter and umami. Umami synergism was represented by all sucrose-best and sweet-sensitive sodium chloride-best neurons. Mediolaterally the PbN was divided into medial, brachium conjunctivum (BC) and lateral subdivisions while rostrocaudally the PbN was divided into rostral and caudal subdivisions for mapping and reconstruction of recording sites. Neurons in the medial and BC subdivisions had a significantly greater magnitude of response to sucrose and to the mixture of monopotassium glutamate and inosine monophosphate than those found in the lateral subdivision. In contrast, neurons in the lateral subdivision possessed a more robust response to quinine hydrochloride. Rostrocaudally no difference was found in the mean magnitude of response. Analysis on the distribution pattern of neuron types classified by their best stimulus revealed that the proportion of neuron types in the medial vs. lateral and BC vs. lateral subdivisions was significantly different, with a greater amount of sucrose-best neurons found medially and within the BC, and a greater amount of sodium chloride-, citric acid- and quinine hydrochloride-best neurons found laterally. There was no significant difference in the neuron-type distribution between rostral and caudal PbN. We also assessed breadth of tuning in these neurons by calculating entropy (H) and noise-to-signal (N/S) ratio. The mean N/S ratio of all neurons (0.43) was significantly lower than that of H value (0.64). Neurons in the caudal PbN had a significantly higher H value than in the rostral PbN. In contrast, mean N/S ratios were not different both mediolaterally and rostrocaudally. These results suggest that although there is overlap in taste quality representation in the mouse PbN, taste

  6. A scalable and accurate method for classifying protein-ligand binding geometries using a MapReduce approach.

    PubMed

    Estrada, T; Zhang, B; Cicotti, P; Armen, R S; Taufer, M

    2012-07-01

    We present a scalable and accurate method for classifying protein-ligand binding geometries in molecular docking. Our method is a three-step process: the first step encodes the geometry of a three-dimensional (3D) ligand conformation into a single 3D point in the space; the second step builds an octree by assigning an octant identifier to every single point in the space under consideration; and the third step performs an octree-based clustering on the reduced conformation space and identifies the most dense octant. We adapt our method for MapReduce and implement it in Hadoop. The load-balancing, fault-tolerance, and scalability in MapReduce allow screening of very large conformation spaces not approachable with traditional clustering methods. We analyze results for docking trials for 23 protein-ligand complexes for HIV protease, 21 protein-ligand complexes for Trypsin, and 12 protein-ligand complexes for P38alpha kinase. We also analyze cross docking trials for 24 ligands, each docking into 24 protein conformations of the HIV protease, and receptor ensemble docking trials for 24 ligands, each docking in a pool of HIV protease receptors. Our method demonstrates significant improvement over energy-only scoring for the accurate identification of native ligand geometries in all these docking assessments. The advantages of our clustering approach make it attractive for complex applications in real-world drug design efforts. We demonstrate that our method is particularly useful for clustering docking results using a minimal ensemble of representative protein conformational states (receptor ensemble docking), which is now a common strategy to address protein flexibility in molecular docking.

  7. Topographic NMF for data representation.

    PubMed

    Xiao, Yanhui; Zhu, Zhenfeng; Zhao, Yao; Wei, Yunchao; Wei, Shikui; Li, Xuelong

    2014-10-01

    Nonnegative matrix factorization (NMF) is a useful technique to explore a parts-based representation by decomposing the original data matrix into a few parts-based basis vectors and encodings with nonnegative constraints. It has been widely used in image processing and pattern recognition tasks due to its psychological and physiological interpretation of natural data whose representation may be parts-based in human brain. However, the nonnegative constraint for matrix factorization is generally not sufficient to produce representations that are robust to local transformations. To overcome this problem, in this paper, we proposed a topographic NMF (TNMF), which imposes a topographic constraint on the encoding factor as a regularizer during matrix factorization. In essence, the topographic constraint is a two-layered network, which contains the square nonlinearity in the first layer and the square-root nonlinearity in the second layer. By pooling together the structure-correlated features belonging to the same hidden topic, the TNMF will force the encodings to be organized in a topographical map. Thus, the feature invariance can be promoted. Some experiments carried out on three standard datasets validate the effectiveness of our method in comparison to the state-of-the-art approaches.

  8. Reconstruction of late Holocene glacier retreat and relevant climatic and topographic patterns in southeastern Tibet by glacier mapping and equilibrium line altitude calculation

    NASA Astrophysics Data System (ADS)

    Loibl, David; Lehmkuhl, Frank

    2014-05-01

    Temperate glaciers in the eastern Nyainqêntanglha range, southeastern Tibet, are highly sensitive to climate change and are therefore of particular high interest for research on late Holocene changes of the monsoonal climate in High Asia. However, due to the remoteness of the area, the scarcity of empirical data, and the challenges to remote sensing work posed by cloud and snow cover, knowledge about the glacier dynamics and changes is still very limited. We applied a remote sensing approach that allowed a comprehensive regional glacier survey despite the few available data. Geomorphologic characteristics, distribution and late Holocene changes of 1964 glaciers were mapped from one of the few appropriate late summer satellite images: a Landsat ETM+ scene from September 23, 1999. The glacier dataset was subsequently parameterized by DEM supported measurements. Complex climate-relief-glacier interactions were studied in detail for three large glaciers in neighboring valleys. Despite their spatial proximity, these display strong heterogeneity in terms of catchment morphology, debris cover, and glacier characteristics. The results of this case study then provided the conceptual basis to use geomorphological evidence, i.e. trimlines and latero-frontal moraines, to obtain quantitative data on the changes since the Little Ice Age (LIA) maximum glacier advance. Statistical analysis of glacier length change revealed an average retreat of ~ 40 % and a trend towards stronger retreat for smaller glaciers. An evaluation of different methods to calculate equilibrium line altitudes (ELAs) indicates that an optimized toe-to-ridge altitude method (TRAM) outperforms other methods in settings with complex topography and a lack of mass-balance measurements. However, a large number of glacier measurements is crucial for high quality TRAM results and special attention has to be paid to different morphological glacier characteristics: debris-cover, reconstitution, valley floor

  9. Topographic Map of Quadrangles 3772, 3774, 3672, and 3674, Gaz-Khan (313), Sarhad (314), Kol-I-Chaqmaqtin (315), Khandud (319), Deh-Ghulaman (320), and Erftah (321) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  10. Topographic Map of Quadrangles 2964, 2966, 3064, and 3066, Shah-Esmail (617), Reg-Alaqadari (618), Samandkhan-Karez (713), Laki-Bander (611), Jahangir-Naweran (612), and Sreh-Chena (707) Quadrangles, Afghanistan

    USGS Publications Warehouse

    Bohannon, Robert G.

    2006-01-01

    This map was produced from several larger digital datasets. Topography was derived from Shuttle Radar Topography Mission (SRTM) 85-meter digital data. Gaps in the original dataset were filled with data digitized from contours on 1:200,000-scale Soviet General Staff Sheets (1978-1997). Contours were generated by cubic convolution averaged over four pixels using TNTmips surface-modeling capabilities. Minor artifacts resulting from the auto-contouring technique are present. Streams were auto-generated from the SRTM data in TNTmips as flow paths. Flow paths were limited in number by their Horton value on a quadrangle-by-quadrangle basis. Peak elevations were averaged over an area measuring 85 m by 85 m (represented by one pixel), and they are slightly lower than the highest corresponding point on the ground. Cultural data were extracted from files downloaded from the Afghanistan Information Management Service (AIMS) Web site (http://www.aims.org.af). The AIMS files were originally derived from maps produced by the Afghanistan Geodesy and Cartography Head Office (AGCHO). Because cultural features were not derived from the SRTM base, they do not match it precisely. Province boundaries are not exactly located. This map is part of a series that includes a geologic map, a topographic map, a Landsat natural-color-image map, and a Landsat false-color-image map for the USGS/AGS (Afghan Geological Survey) quadrangles covering Afghanistan. The maps for any given quadrangle have the same open-file number but a different letter suffix, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively. The open-file report (OFR) numbers for each quadrangle range in sequence from 1092 - 1123. The present map series is to be followed by a second series, in which the geology is reinterpreted on the basis of analysis of remote-sensing data, limited fieldwork, and library research. The second series is to be produced by the USGS

  11. Spatial Relation Predicates in Topographic Feature Semantics

    USGS Publications Warehouse

    Varanka, Dalia E.; Caro, Holly K.

    2013-01-01

    Topographic data are designed and widely used for base maps of diverse applications, yet the power of these information sources largely relies on the interpretive skills of map readers and relational database expert users once the data are in map or geographic information system (GIS) form. Advances in geospatial semantic technology offer data model alternatives for explicating concepts and articulating complex data queries and statements. To understand and enrich the vocabulary of topographic feature properties for semantic technology, English language spatial relation predicates were analyzed in three standard topographic feature glossaries. The analytical approach drew from disciplinary concepts in geography, linguistics, and information science. Five major classes of spatial relation predicates were identified from the analysis; representations for most of these are not widely available. The classes are: part-whole (which are commonly modeled throughout semantic and linked-data networks), geometric, processes, human intention, and spatial prepositions. These are commonly found in the ‘real world’ and support the environmental science basis for digital topographical mapping. The spatial relation concepts are based on sets of relation terms presented in this chapter, though these lists are not prescriptive or exhaustive. The results of this study make explicit the concepts forming a broad set of spatial relation expressions, which in turn form the basis for expanding the range of possible queries for topographical data analysis and mapping.

  12. SU-D-18C-05: Variable Bolus Arterial Spin Labeling MRI for Accurate Cerebral Blood Flow and Arterial Transit Time Mapping

    SciTech Connect

    Johnston, M; Jung, Y

    2014-06-01

    Purpose: Arterial spin labeling (ASL) is an MRI perfusion imaging method from which quantitative cerebral blood flow (CBF) maps can be calculated. Acquisition with variable post-labeling delays (PLD) and variable TRs allows for arterial transit time (ATT) mapping and leads to more accurate CBF quantification with a scan time saving of 48%. In addition, T1 and M0 maps can be obtained without a separate scan. In order to accurately estimate ATT and T1 of brain tissue from the ASL data, variable labeling durations were invented, entitled variable-bolus ASL. Methods: All images were collected on a healthy subject with a 3T Siemens Skyra scanner. Variable-bolus Psuedo-continuous ASL (PCASL) images were collected with 7 TI times ranging 100-4300ms in increments of 700ms with TR ranging 1000-5200ms. All boluses were 1600ms when the TI allowed, otherwise the bolus duration was 100ms shorter than the TI. All TI times were interleaved to reduce sensitivity to motion. Voxel-wise T1 and M0 maps were estimated using a linear least squares fitting routine from the average singal from each TI time. Then pairwise subtraction of each label/control pair and averaging for each TI time was performed. CBF and ATT maps were created using the standard model by Buxton et al. with a nonlinear fitting routine using the T1 tissue map. Results: CBF maps insensitive to ATT were produced along with ATT maps. Both maps show patterns and averages consistent with literature. The T1 map also shows typical T1 contrast. Conclusion: It has been demonstrated that variablebolus ASL produces CBF maps free from the errors due to ATT and tissue T1 variations and provides M0, T1, and ATT maps which have potential utility. This is accomplished with a single scan in a feasible scan time (under 6 minutes) with low sensivity to motion.

  13. Lambert and Mercator map projections in geology and geophysics

    NASA Astrophysics Data System (ADS)

    Williams, R. T.

    1995-04-01

    Lambert and transverse Mercator map projections are used for topographic maps published by the U.S. Geological Survey, for the American State Plane coordinate system, and for the UTM grid system. The properties and mathematical equations for these projections are summarized. Utility computer programs in FORTRAN that accurately calculate latitude and longitude from Lambert or Mercator coordinates, or the inverse, are presented.

  14. A fully automatic tool to perform accurate flood mapping by merging remote sensing imagery and ancillary data

    NASA Astrophysics Data System (ADS)

    D'Addabbo, Annarita; Refice, Alberto; Lovergine, Francesco; Pasquariello, Guido

    2016-04-01

    Flooding is one of the most frequent and expansive natural hazard. High-resolution flood mapping is an essential step in the monitoring and prevention of inundation hazard, both to gain insight into the processes involved in the generation of flooding events, and from the practical point of view of the precise assessment of inundated areas. Remote sensing data are recognized to be useful in this respect, thanks to the high resolution and regular revisit schedules of state-of-the-art satellites, moreover offering a synoptic overview of the extent of flooding. In particular, Synthetic Aperture Radar (SAR) data present several favorable characteristics for flood mapping, such as their relative insensitivity to the meteorological conditions during acquisitions, as well as the possibility of acquiring independently of solar illumination, thanks to the active nature of the radar sensors [1]. However, flood scenarios are typical examples of complex situations in which different factors have to be considered to provide accurate and robust interpretation of the situation on the ground: the presence of many land cover types, each one with a particular signature in presence of flood, requires modelling the behavior of different objects in the scene in order to associate them to flood or no flood conditions [2]. Generally, the fusion of multi-temporal, multi-sensor, multi-resolution and/or multi-platform Earth observation image data, together with other ancillary information, seems to have a key role in the pursuit of a consistent interpretation of complex scenes. In the case of flooding, distance from the river, terrain elevation, hydrologic information or some combination thereof can add useful information to remote sensing data. Suitable methods, able to manage and merge different kind of data, are so particularly needed. In this work, a fully automatic tool, based on Bayesian Networks (BNs) [3] and able to perform data fusion, is presented. It supplies flood maps

  15. (abstract) Topographic Signatures in Geology

    NASA Technical Reports Server (NTRS)

    Farr, Tom G.; Evans, Diane L.

    1996-01-01

    Topographic information is required for many Earth Science investigations. For example, topography is an important element in regional and global geomorphic studies because it reflects the interplay between the climate-driven processes of erosion and the tectonic processes of uplift. A number of techniques have been developed to analyze digital topographic data, including Fourier texture analysis. A Fourier transform of the topography of an area allows the spatial frequency content of the topography to be analyzed. Band-pass filtering of the transform produces images representing the amplitude of different spatial wavelengths. These are then used in a multi-band classification to map units based on their spatial frequency content. The results using a radar image instead of digital topography showed good correspondence to a geologic map, however brightness variations in the image unrelated to topography caused errors. An additional benefit to the use of Fourier band-pass images for the classification is that the textural signatures of the units are quantative measures of the spatial characteristics of the units that may be used to map similar units in similar environments.

  16. Transient topographical amnesia.

    PubMed Central

    Stracciari, A; Lorusso, S; Pazzaglia, P

    1994-01-01

    Ten healthy middle aged or elderly women experienced isolated episodes of topographical amnesia without an obvious aetiology. It is likely a benign cognitive disorder, similar to transient global amnesia. PMID:7964826

  17. Digital topographic map showing the extents of glacial ice and perennial snowfields at Mount Rainier, Washington, based on the LiDAR survey of September 2007 to October 2008

    USGS Publications Warehouse

    Robinson, Joel E.; Sisson, Thomas W.; Swinney, Darin D.

    2010-01-01

    In response to severe flooding in November 2006, the National Park Service contracted for a high-resolution aerial Light Detection and Ranging (LiDAR) topographic survey of Mount Rainier National Park, Washington. Due to inclement weather, this survey was performed in two stages: early September 2007 and September-October 2008. The total surveyed area of 241,585 acres includes an approximately 100-m-wide buffer zone around the Park to ensure complete coverage and adequate point densities at survey edges. Final results averaged 5.73 laser first return points/m2 over forested and high-elevation terrain, with a vertical accuracy of 3.7 cm on bare road surfaces and mean relative accuracy of 11 cm, based on comparisons between flightlines. Bare-earth topography, as developed by the contractor, is included in this release. A map of the 2007-2008 limits of glaciers and perennial snowfields was developed by digitizing 1:2,000 to 1:5,000 slope and shaded-relief images derived from the LiDAR topography. Edges of snow and exposed ice are readily seen in such images as sharp changes in surface roughness and slope. Ice mantled by moraine can be distinguished by the moraine's distinctly high roughness due to ice motion and melting, local exposures of smooth ice, and commonly by the presence of crevasses and shear boundaries. A map of the 1970 limits of ice and perennial snow was also developed by digitizing the snow and ice perimeters as depicted on the hydrologic separates used to produce the 1:24,000 topographic maps of the Mount Rainier region. These maps, produced in 1971, were derived from September 1970 aerial photographs. Boundaries between adjacent glacier systems were estimated and mapped from drainage divides, including partly emergent rock ridges, lines of diverging slope, and medial moraines. This data release contains the bare-earth LiDAR data as an ESRI grid file (DS549-Rainier_LiDAR.zip), the glacial limits derived from the USGS 1970 aerial photographs of the

  18. Transient up-regulation of retinal EphA3 and EphA5, but not ephrin-A2, coincides with re-establishment of a topographic map during optic nerve regeneration in goldfish.

    PubMed

    King, Carolyn E; Wallace, Amy; Rodger, Jennifer; Bartlett, Carole; Beazley, Lyn D; Dunlop, Sarah A

    2003-10-01

    Eph tyrosine kinase receptors and their ligands, the ephrins, play a key role in the establishment of retinotectal topography during development. Tectal up-regulation of ephrin-A2 in goldfish, coincident with the reestablishment of a retinotectal map, suggests a similar role during optic nerve regeneration. Here we report a complementary study of EphA3, EphA5 and ephrin-A2 expression in the retina. EphA3 and EphA5 are transiently up-regulated as ascending naso-temporal gradients, whereas ephrin-A2 remains uniform. The expression profiles differ from those in developing chick and mouse, suggesting that different combinations of retinal Eph receptors and ligands can generate topographic guidance information.

  19. A Rapid, Accurate, and Efficient Method to Map Heavy Metal-Contaminated Soils of Abandoned Mine Sites Using Converted Portable XRF Data and GIS.

    PubMed

    Suh, Jangwon; Lee, Hyeongyu; Choi, Yosoon

    2016-12-01

    The use of portable X-ray fluorescence (PXRF) and inductively coupled plasma atomic emission spectrometry (ICP-AES) increases the rapidity and accuracy of soil contamination mapping, respectively. In practice, it is often necessary to repeat the soil contamination assessment and mapping procedure several times during soil management within a limited budget. In this study, we have developed a rapid, inexpensive, and accurate soil contamination mapping method using a PXRF data and geostatistical spatial interpolation. To obtain a large quantity of high quality data for interpolation, in situ PXRF data analyzed at 40 points were transformed to converted PXRF data using the correlation between PXRF and ICP-AES data. The method was applied to an abandoned mine site in Korea to generate a soil contamination map for copper and was validated for investigation speed and prediction accuracy. As a result, regions that required soil remediation were identified. Our method significantly shortened the time required for mapping compared to the conventional mapping method and provided copper concentration estimates with high accuracy similar to those measured by ICP-AES. Therefore, our method is an effective way of mapping soil contamination if we consistently construct a database based on the correlation between PXRF and ICP-AES data.

  20. A Rapid, Accurate, and Efficient Method to Map Heavy Metal-Contaminated Soils of Abandoned Mine Sites Using Converted Portable XRF Data and GIS

    PubMed Central

    Suh, Jangwon; Lee, Hyeongyu; Choi, Yosoon

    2016-01-01

    The use of portable X-ray fluorescence (PXRF) and inductively coupled plasma atomic emission spectrometry (ICP-AES) increases the rapidity and accuracy of soil contamination mapping, respectively. In practice, it is often necessary to repeat the soil contamination assessment and mapping procedure several times during soil management within a limited budget. In this study, we have developed a rapid, inexpensive, and accurate soil contamination mapping method using a PXRF data and geostatistical spatial interpolation. To obtain a large quantity of high quality data for interpolation, in situ PXRF data analyzed at 40 points were transformed to converted PXRF data using the correlation between PXRF and ICP-AES data. The method was applied to an abandoned mine site in Korea to generate a soil contamination map for copper and was validated for investigation speed and prediction accuracy. As a result, regions that required soil remediation were identified. Our method significantly shortened the time required for mapping compared to the conventional mapping method and provided copper concentration estimates with high accuracy similar to those measured by ICP-AES. Therefore, our method is an effective way of mapping soil contamination if we consistently construct a database based on the correlation between PXRF and ICP-AES data. PMID:27916970

  1. Reinventing the National Topographic Database

    NASA Astrophysics Data System (ADS)

    Jakobsson, A.; Ilves, R.

    2016-06-01

    The National Land Survey (NLS) has had a digital topographic database (TDB) since 1992. Many of its features are based on the Basic Map created by M. Kajamaa in 1947, mapping first completed in 1977. The basis for the renewal of the TDB begun by investigating the value of the TDB, a study made by the Aalto University in 2014 and a study on the new TDB system 2030 published by the Ministry of Agriculture in 2015. As a result of these studies the NLS set up a programme for creating a new National Topographic Database (NTDB) in beginning of 2015. First new version should be available in 2019. The new NTDB has following key features: 1) it is based on processes where data is naturally maintained, 2) it is quality managed, 3) it has persistent Ids, 4) it supports 3D, 4D, 5) it is based on standards. The technical architecture is based on interoperable modules. A website for following the development of the NTDB can be accessed for more information: http://kmtk.maanmittauslaitos.fi/.

  2. Ultrahigh resolution topographic mapping of Mars with MRO HiRISE stereo images: Meter-scale slopes of candidate Phoenix landing sites

    USGS Publications Warehouse

    Kirk, R.L.; Howington-Kraus, E.; Rosiek, M.R.; Anderson, J.A.; Archinal, B.A.; Becker, K.J.; Cook, D.A.; Galuszka, D.M.; Geissler, P.E.; Hare, T.M.; Holmberg, I.M.; Keszthelyi, L.P.; Redding, B.L.; Delamere, W.A.; Gallagher, D.; Chapel, J.D.; Eliason, E.M.; King, R.; McEwen, A.S.

    2009-01-01

    The objectives of this paper are twofold: first, to report our estimates of the meter-to-decameter-scale topography and slopes of candidate landing sites for the Phoenix mission, based on analysis of Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC) images with a typical pixel scale of 3 m and Mars Reconnaissance Orbiter (MRO) High Resolution Imaging Science Experiment (HiRISE) images at 0.3 m pixel-1 and, second, to document in detail the geometric calibration, software, and procedures on which the photogrammetric analysis of HiRISE data is based. A combination of optical design modeling, laboratory observations, star images, and Mars images form the basis for software in the U.S. Geological Survey Integrated Software for Imagers and Spectrometers (ISIS) 3 system that corrects the images for a variety of distortions with single-pixel or subpixel accuracy. Corrected images are analyzed in the commercial photogrammetric software SOCET SET (??BAE Systems), yielding digital topographic models (DTMs) with a grid spacing of 1 m (3-4 pixels) that require minimal interactive editing. Photoclinometry yields DTMs with single-pixel grid spacing. Slopes from MOC and HiRISE are comparable throughout the latitude zone of interest and compare favorably with those where past missions have landed successfully; only the Mars Exploration Rover (MER) B site in Meridiani Planum is smoother. MOC results at multiple locations have root-mean-square (RMS) bidirectional slopes of 0.8-4.5?? at baselines of 3-10 m. HiRISE stereopairs (one per final candidate site and one in the former site) yield 1.8-2.8?? slopes at 1-m baseline. Slopes at 1 m from photoclinometry are also in the range 2-3?? after correction for image blur. Slopes exceeding the 16?? Phoenix safety limit are extremely rare. Copyright 2008 by the American Geophysical Union.

  3. A mutate-and-map strategy accurately infers the base pairs of a 35-nucleotide model RNA

    PubMed Central

    Kladwang, Wipapat; Cordero, Pablo; Das, Rhiju

    2011-01-01

    We present a rapid experimental strategy for inferring base pairs in structured RNAs via an information-rich extension of classic chemical mapping approaches. The mutate-and-map method, previously applied to a DNA/RNA helix, systematically searches for single mutations that enhance the chemical accessibility of base-pairing partners distant in sequence. To test this strategy for structured RNAs, we have carried out mutate-and-map measurements for a 35-nt hairpin, called the MedLoop RNA, embedded within an 80-nt sequence. We demonstrate the synthesis of all 105 single mutants of the MedLoop RNA sequence and present high-throughput DMS, CMCT, and SHAPE modification measurements for this library at single-nucleotide resolution. The resulting two-dimensional data reveal visually clear, punctate features corresponding to RNA base pair interactions as well as more complex features; these signals can be qualitatively rationalized by comparison to secondary structure predictions. Finally, we present an automated, sequence-blind analysis that permits the confident identification of nine of the 10 MedLoop RNA base pairs at single-nucleotide resolution, while discriminating against all 1460 false-positive base pairs. These results establish the accuracy and information content of the mutate-and-map strategy and support its feasibility for rapidly characterizing the base-pairing patterns of larger and more complex RNA systems. PMID:21239468

  4. Aerial radiometric and magnetic survey: Marysvale detail survey, Richfield National Topographic Map sheet, Utah. Volume III. Magnetic and ancillary stacked profile data. Final report

    SciTech Connect

    Not Available

    1982-01-01

    The results of the analyses of a systematic airborne gamma radiation and total magnetic survey for the area identified as Marysvale, located in southwestern Utah, is presented in Volumes I-IV of this report. The airborne data gathered is reduced by ground computer facilities to yield profile plots of the equivalent uranium, thorium and potassium gamma radiation intensities, the ratios of these intensities, the total gamma radiation counting rate and the earth's residual magnetic field intensity. Profile plots of the aircraft's altitude above the earth's surface, the ambient temperature and pressure, and the magnetic field data measured by a base station magnetometer is presented also. An evaluation of the distribution of the radiometric data in terms of its established geochemical map units, which were derived via geochemical analysis methods, for the entire survey area has been prepared and is included. The determination of the geochemical units presented has been established principally from the analysis of the radiometric and magnetic contour maps and, more importantly, the multi-variate analysis map. A general description of the area, including descriptions of the various geologic and geochemical units, is included within the text. This volume contains the 5-variable residual magnetic and ancillary stacked profile data for the entire survey area.

  5. Aerial radiometric and magnetic survey: Marysvale detail survey, Richfield National Topographic Map sheet, Utah. Volume I. General narrative report. Final report

    SciTech Connect

    Not Available

    1982-01-01

    The results of the analyses of a systematic airborne gamma radiation and total magnetic survey for the area identified as Marysvale, located in southwestern Utah, is presented in Volumes I-IV of this report. The airborne data gathered is reduced by ground computer facilities to yield profile plots of the equivalent uranium, thorium and potassium gamma radiation intensities, the ratios of these intensities, the total gamma radiation counting rate and the earth's residual magnetic field intensity. Profile plots of the aircraft's altitude above the earth's surface, the ambient temperature and pressure, and the magnetic field data measured by a base station magnetometer is presented also. An evaluation of the distribution of the radiometric data in terms of its established geochemical map units, which were derived via geochemical analysis methods, for the entire survey area has been prepared and is included. The determination of the geochemical units presented has been established principally from the analysis of the radiometric and magnetic contour maps and, more importantly, the multi-variate analysis map. A general description of the area, including descriptions of the various geologic and geochemical units, is included within the text. Volume I contains the following: flight operations; data acquisition and processing; synopsis of surface geology; geochemical data interpretation; geologic-geochemical analogy; summary and recommendations for geochemical units.

  6. Aerial radiometric and magnetic survey: Marysvale detail survey, Richfield National Topographic Map sheet, Utah. Volume II. Radiometric multi-variable stacked profile data. Final report

    SciTech Connect

    Not Available

    1982-01-01

    The results of the analyses of a systematic airborne gamma radiation and total magnetic survey for the area identified as Marysvale, located in southwestern Utah, is presented in Volumes I-IV of this report. The airborne data gathered is reduced by ground computer facilities to yield profile plots of the equivalent uranium, thorium and potassium gamma radiation intensities, the ratios of these intensities, the total gamma radiation counting rate and the earth's residual magnetic field intensity. Profile plots of the aircraft's altitude above the earth's surface, the ambient temperature and pressure, and the magnetic field data measured by a base station magnetometer is presented also. An evaluation of the distribution of the radiometric data in terms of its established geochemical map units, which were derived via geochemical analysis methods, for the entire survey area has been prepared and is included. The determination of the geochemical units presented has been established principally from the analysis of the radiometric and magnetic contour maps and, more importantly, the multi-variate analysis map. A general description of the area, including descriptions of the various geologic and geochemical units, is included within the text. Volume II contains the 10-variable radiometric stacked profile data for the entire survey area.

  7. Geological mapping of impact melt deposits at lunar complex craters Jackson and Tycho: Morphologic and topographic diversity and relation to the cratering process

    NASA Astrophysics Data System (ADS)

    Dhingra, Deepak; Head, James W.; Pieters, Carle M.

    2017-02-01

    High resolution geological mapping, aided by imagery and elevation data from the lunar reconnaissance orbiter (LRO) and Kaguya missions, has revealed the scientifically rich character of impact melt deposits at two young complex craters: Jackson (71 km) and Tycho (85 km). The morphology and distribution of mapped impact melt units provide several insights into the cratering process. We report elevation differences (>200 m) among large, coherent floor sections within a single crater and interpret them to be caused by crater wall collapse and/or large scale structural failure of the floor region. Clast-poor, smooth melt deposits are correlated with floor sections at lower elevations and likely represent ponded deposits sourced from higher elevation regions (viz. crater walls). In addition, these deposits are also located in the inferred downrange direction of the impact. Melt-coated large blocks spanning several kilometers are common on the crater floors and may represent collapsed wall sections or in some cases, subdued sections of the central peaks. Spatial trends in the mapped impact melt units at the two craters provide clues to decipher the conditions during each impact event and subsequent evolution of the crater floor.

  8. Phase Space Tomography: A Simple, Portable and Accurate Technique to Map Phase Spaces of Beams with Space Charge

    SciTech Connect

    Stratakis, D.; Kishek, R. A.; Bernal, S.; Walter, M.; Haber, I.; Fiorito, R.; Thangaraj, J. C. T.; Quinn, B.; Reiser, M.; O'Shea, P. G.; Li, H.

    2006-11-27

    In order to understand the charged particle dynamics, e.g. the halo formation, emittance growth, x-y energy transfer and coupling, knowledge of the actual phase space is needed. Other the past decade there is an increasing number of articles who use tomography to map the beam phase space and measure the beam emittance. These studies where performed at high energy facilities where the effect of space charge was neglible and therefore not considered in the analysis. This work extends the tomography technique to beams with space charge. In order to simplify the analysis linear forces where assumed. By carefully modeling the tomography process using the particle-in-cell code WARP we test the validity of our assumptions and the accuracy of the reconstructed phase space. Finally, we report experimental results of phase space mapping at the University of Maryland Electron Ring (UMER) using tomography.

  9. The geography and geology of Alaska; a summary of existing knowledge, with a section on climate, and a topographic map and description thereof

    USGS Publications Warehouse

    Brooks, A.H.; Abbe, Cleveland; Goode, R.U.

    1906-01-01

    It is the writer's purpose to describe in nontechnical language the larger geographic features and discuss their relation as far as the data available will permit. In the treatment of the geology, however, less effort will be made to make the matter acceptable to the lay reader. It is hoped, however, that a brief summary of the salient features of the geologic history' may be not without interest to the general public. If this paper serves in some measure to dispel the popular fallacies regarding Alaska and to disseminate more accurate knowledge of its geographic and geologic features, the purpose of its publication will be accomplished.

  10. A 125 year history of topographic mapping and GIS in the U.S. Geological Survey 1884-2009, part 2: 1980-2009

    USGS Publications Warehouse

    Usery, E. Lynn; Varanka, Dalia; Finn, Michael P.

    2009-01-01

    The United States Geological Survey (USGS) entered the mainstream of developments in computer-assisted technology for mapping during the 1970s. The introduction by USGS of digital line graphs (DLGs), digital elevation models (DEMs), and land use data analysis (LUDA) nationwide land-cover data provided a base for the rapid expansion of the use of GIS in the 1980s. Whereas USGS had developed the topologically structured DLG data and the Geographic Information Retrieval and Analysis System (GIRAS) for land-cover data, the Map Overlay Statistical System (MOSS), a nontopologically structured GIS software package developed by Autometric, Inc., under contract to the U.S. Fish and Wildlife Service, dominated the use of GIS by federal agencies in the 1970s. Thus, USGS data was used in MOSS, but the topological structure, which later became a requirement for GIS vector datasets, was not used in early GIS applications. The introduction of Esri's ARC/INFO in 1982 changed that, and by the end of the 1980s, topological structure for vector data was essential, and ARC/INFO was the dominant GIS software package used by federal agencies.

  11. A topographic map of sensory cell terminal arborizations in the cricket CNS; correlation with birthday and position in a sensory array.

    PubMed

    Murphey, R K; Jacklet, A; Schuster, L

    1980-05-01

    The development of a group of club-shaped sensilla called clavate hairs, located on the cerci of the cricket (Acheta domesticus), was examined morphologically. The clavate hairs are located on the base of the cercus and are thought to inform the animal of its orientation with respect to gravity. There are two groups of clavate hairs distinguished from one another by the orientation of their sockets: a dorso-medial group whose sockets are oriented perpendicular to the long axis of the cercus and a ventro-medial group inclined 45-60 degrees away from the perpendicular. The ventro-medial group consists of a series of rows of sensilla running parallel to the long axis of the cercus. By examining a cast-off exoskeleton in the scanning electron microscope and comparing it with newly developed cuticle of the subsequent instar (Fig. 3), we showed how receptors were added to the ventro-medial array of clavate hairs. The first ventral hair (#10,Fig.1) appeared in the second instar. Three more hairs were added in the third instar: two (#11 and #12) proximal to hair 10 forming the first row and one (#20) medial to 11 and initiating the second row. After the third instar on hair was usually added proximal to each row each time the specimen molted. Because of the regular positioning of hairs and their orderly addition to the array, it is possible to identify uniquely all of the hairs in the three largest rows of ventral hairs (Fig. 4). We developed a simple method for staining the neuron associated with each hair. A hair was injured by cutting off its tipe. A bubble of cobaltous acetate was then placed on the hair for 18-20 hours and only the neuron associated with the injured hair took up the stain. The synaptic terminal aborizations of identified neurons examined in this manner were unique and reproducible from specimen to specimen (Fig.6). Furthermore, there is a topographic order to the terminal aborizations. Within one row the oldest neurons project furthest into the

  12. Bodily maps of emotions

    PubMed Central

    Nummenmaa, Lauri; Glerean, Enrico; Hari, Riitta; Hietanen, Jari K.

    2014-01-01

    Emotions are often felt in the body, and somatosensory feedback has been proposed to trigger conscious emotional experiences. Here we reveal maps of bodily sensations associated with different emotions using a unique topographical self-report method. In five experiments, participants (n = 701) were shown two silhouettes of bodies alongside emotional words, stories, movies, or facial expressions. They were asked to color the bodily regions whose activity they felt increasing or decreasing while viewing each stimulus. Different emotions were consistently associated with statistically separable bodily sensation maps across experiments. These maps were concordant across West European and East Asian samples. Statistical classifiers distinguished emotion-specific activation maps accurately, confirming independence of topographies across emotions. We propose that emotions are represented in the somatosensory system as culturally universal categorical somatotopic maps. Perception of these emotion-triggered bodily changes may play a key role in generating consciously felt emotions. PMID:24379370

  13. Bodily maps of emotions.

    PubMed

    Nummenmaa, Lauri; Glerean, Enrico; Hari, Riitta; Hietanen, Jari K

    2014-01-14

    Emotions are often felt in the body, and somatosensory feedback has been proposed to trigger conscious emotional experiences. Here we reveal maps of bodily sensations associated with different emotions using a unique topographical self-report method. In five experiments, participants (n = 701) were shown two silhouettes of bodies alongside emotional words, stories, movies, or facial expressions. They were asked to color the bodily regions whose activity they felt increasing or decreasing while viewing each stimulus. Different emotions were consistently associated with statistically separable bodily sensation maps across experiments. These maps were concordant across West European and East Asian samples. Statistical classifiers distinguished emotion-specific activation maps accurately, confirming independence of topographies across emotions. We propose that emotions are represented in the somatosensory system as culturally universal categorical somatotopic maps. Perception of these emotion-triggered bodily changes may play a key role in generating consciously felt emotions.

  14. Accurate electron affinity of V and fine-structure splittings of V- via slow-electron velocity-map imaging

    NASA Astrophysics Data System (ADS)

    Fu, Xiaoxi; Luo, Zhihong; Chen, Xiaolin; Li, Jiaming; Ning, Chuangang

    2016-10-01

    We report the high-resolution photoelectron spectra of negative vanadium ions obtained via the slow-electron velocity-map imaging method. The electron affinity of V was determined to be 4255.9(18) cm-1 or 0.527 66(20) eV. The accuracy was improved by a factor of 60 with regard to the previous measurement. The fine structure of V- was well resolved: 35.9(11) (5D1), 103.8(12) (5D2), 204.17(74) (5D3), and 330.58(40) cm-1 (5D4) above the ground state 5D0, respectively.

  15. Accurate electron affinity of V and fine-structure splittings of V(-) via slow-electron velocity-map imaging.

    PubMed

    Fu, Xiaoxi; Luo, Zhihong; Chen, Xiaolin; Li, Jiaming; Ning, Chuangang

    2016-10-28

    We report the high-resolution photoelectron spectra of negative vanadium ions obtained via the slow-electron velocity-map imaging method. The electron affinity of V was determined to be 4255.9(18) cm(-1) or 0.527 66(20) eV. The accuracy was improved by a factor of 60 with regard to the previous measurement. The fine structure of V(-) was well resolved: 35.9(11) ((5)D1), 103.8(12) ((5)D2), 204.17(74) ((5)D3), and 330.58(40) cm(-1) ((5)D4) above the ground state (5)D0, respectively.

  16. Classification of Water Surfaces Using Airborne Topographic LIDAR Data

    NASA Astrophysics Data System (ADS)

    Smeeckaert, J.; Mallet, C.; David, N.

    2013-05-01

    Accurate Digital Terrain Models (DTM) are inevitable inputs for mapping areas subject to natural hazards. Topographic airborne laser scanning has become an established technique to characterize the Earth surface: lidar provides 3D point clouds allowing a fine reconstruction of the topography. For flood hazard modeling, the key step before terrain modeling is the discrimination of land and water surfaces within the delivered point clouds. Therefore, instantaneous shoreline, river borders, inland waters can be extracted as a basis for more reliable DTM generation. This paper presents an automatic, efficient, and versatile workflow for land/water classification of airborne topographic lidar data. For that purpose, a classification framework based on Support Vector Machines (SVM) is designed. First, a restricted set of features, based only 3D lidar point coordinates and flightline information, is defined. Then, the SVM learning step is performed on small but well-targeted areas thanks to an automatic region growing strategy. Finally, label probabilities given by the SVM are merged during a probabilistic relaxation step in order to remove pixel-wise misclassification. Results show that survey of millions of points are labelled with high accuracy (>95% in most cases for coastal areas, and >89% for rivers) and that small natural and anthropic features of interest are still well classified though we work at low point densities (0.5-4 pts/m2). Our approach is valid for coasts and rivers, and provides a strong basis for further discrimination of land-cover classes and coastal habitats.

  17. Accurate Breakpoint Mapping in Apparently Balanced Translocation Families with Discordant Phenotypes Using Whole Genome Mate-Pair Sequencing

    PubMed Central

    Aristidou, Constantia; Koufaris, Costas; Theodosiou, Athina; Bak, Mads; Mehrjouy, Mana M.; Behjati, Farkhondeh; Tanteles, George; Christophidou-Anastasiadou, Violetta; Tommerup, Niels

    2017-01-01

    Familial apparently balanced translocations (ABTs) segregating with discordant phenotypes are extremely challenging for interpretation and counseling due to the scarcity of publications and lack of routine techniques for quick investigation. Recently, next generation sequencing has emerged as an efficacious methodology for precise detection of translocation breakpoints. However, studies so far have mainly focused on de novo translocations. The present study focuses specifically on familial cases in order to shed some light to this diagnostic dilemma. Whole-genome mate-pair sequencing (WG-MPS) was applied to map the breakpoints in nine two-way ABT carriers from four families. Translocation breakpoints and patient-specific structural variants were validated by Sanger sequencing and quantitative Real Time PCR, respectively. Identical sequencing patterns and breakpoints were identified in affected and non-affected members carrying the same translocations. PTCD1, ATP5J2-PTCD1, CADPS2, and STPG1 were disrupted by the translocations in three families, rendering them initially as possible disease candidate genes. However, subsequent mutation screening and structural variant analysis did not reveal any pathogenic mutations or unique variants in the affected individuals that could explain the phenotypic differences between carriers of the same translocations. In conclusion, we suggest that NGS-based methods, such as WG-MPS, can be successfully used for detailed mapping of translocation breakpoints, which can also be used in routine clinical investigation of ABT cases. Unlike de novo translocations, no associations were determined here between familial two-way ABTs and the phenotype of the affected members, in which the presence of cryptic imbalances and complex chromosomal rearrangements has been excluded. Future whole-exome or whole-genome sequencing will potentially reveal unidentified mutations in the patients underlying the discordant phenotypes within each family. In

  18. Shuttle Radar Topographic Mission (SRTM) Illustration

    NASA Technical Reports Server (NTRS)

    2000-01-01

    Launched February 11, 2000, the STS-99 Shuttle Radar Topographic Mission (SRTM) was the most ambitious Earth mapping mission to date. This illustration shows the Space Shuttle Endeavour orbiting some 145 miles (233 kilometers) above Earth. With C-band and X-band outboard anternae at work, one located in the Shuttle bay and the other located on the end of a 60-meter deployable mast, the SRTM radar was able to penetrate clouds as well as provide its own illumination, independent of daylight, obtaining 3-dimentional topographic images of the world's surface up to the Arctic and Antarctic Circles. The mission completed 222 hours of around the clock radar mapping, gathering enough information to fill more than 20,000 CDs.

  19. Topographic and Morphologic Evidence for Flooding of Ganymede's Resurfaced Terrains by Low-Viscosity Water-Ice Lavas

    NASA Technical Reports Server (NTRS)

    McKinnon, W. B.; Schenk, P. M.; Moore, J. M.

    2001-01-01

    Topographic mapping in at least three distinct regions of Ganymede reveals that smooth terrains are flat and are topographically depressed. This and embayment relationships are consistent with volcanic resurfacing. Additional information is contained in the original extended abstract.

  20. GETTING LOST: TOPOGRAPHIC SKILLS IN ACQUIRED AND DEVELOPMENTAL PROSOPAGNOSIA

    PubMed Central

    Lee, Edison; Pancaroglu, Raika; Burles, Ford; Duchaine, Brad; Iaria, Giuseppe; Barton, Jason J S

    2016-01-01

    Previous studies report that acquired prosopagnosia is frequently associated with topographic disorientation. Whether this is associated with a specific anatomic subtype of prosopagnosia, how frequently it is seen with the developmental variant, and what specific topographic function is impaired to account for this problem are not known. We studied ten subjects with acquired prosopagnosia from either occipitotemporal or anterior temporal lesions and seven with developmental prosopagnosia. Subjects were given a battery of topographic tests, including house and scene recognition, the road map test, a test of cognitive map formation, and a standardized self-report questionnaire. House and/or scene recognition were frequently impaired after either occipitotemporal or anterior temporal lesions in acquired prosopagnosia. Subjects with occipitotemporal lesions were also impaired in cognitive map formation: an overlap analysis identified right fusiform and parahippocampal gyri as a likely correlate. Only one subject with acquired prosopagnosia had mild difficulty with directional orientation on the road map test. Only one subject with developmental prosopagnosia had difficulty with cognitive map formation, and none were impaired on the other tests. Scores for house and scene recognition correlated most strongly with the results of the questionnaire. We conclude that topographic disorientation in acquired prosopagnosia reflects impaired place recognition, with a contribution from poor cognitive map formation when there is occipitotemporal damage. Topographic impairments are less frequent in developmental prosopagnosia. PMID:26874939

  1. Getting lost: Topographic skills in acquired and developmental prosopagnosia.

    PubMed

    Corrow, Jeffrey C; Corrow, Sherryse L; Lee, Edison; Pancaroglu, Raika; Burles, Ford; Duchaine, Brad; Iaria, Giuseppe; Barton, Jason J S

    2016-03-01

    Previous studies report that acquired prosopagnosia is frequently associated with topographic disorientation. Whether this is associated with a specific anatomic subtype of prosopagnosia, how frequently it is seen with the developmental variant, and what specific topographic function is impaired to account for this problem are not known. We studied ten subjects with acquired prosopagnosia from either occipitotemporal or anterior temporal (AT) lesions and seven with developmental prosopagnosia. Subjects were given a battery of topographic tests, including house and scene recognition, the road map test, a test of cognitive map formation, and a standardized self-report questionnaire. House and/or scene recognition were frequently impaired after either occipitotemporal or AT lesions in acquired prosopagnosia. Subjects with occipitotemporal lesions were also impaired in cognitive map formation: an overlap analysis identified right fusiform and parahippocampal gyri as a likely correlate. Only one subject with acquired prosopagnosia had mild difficulty with directional orientation on the road map test. Only one subject with developmental prosopagnosia had difficulty with cognitive map formation, and none were impaired on the other tests. Scores for house and scene recognition correlated most strongly with the results of the questionnaire. We conclude that topographic disorientation in acquired prosopagnosia reflects impaired place recognition, with a contribution from poor cognitive map formation when there is occipitotemporal damage. Topographic impairments are less frequent in developmental prosopagnosia.

  2. Topographic Structure from Motion

    NASA Astrophysics Data System (ADS)

    Fonstad, M. A.; Dietrich, J. T.; Courville, B. C.; Jensen, J.; Carbonneau, P.

    2011-12-01

    The production of high-resolution topographic datasets is of increasing concern and application throughout the geomorphic sciences, and river science is no exception. Consequently, a wide range of topographic measurement methods have evolved. Despite the range of available methods, the production of high resolution, high quality digital elevation models (DEMs) generally requires a significant investment in personnel time, hardware and/or software. However, image-based methods such as digital photogrammetry have steadily been decreasing in costs. Initially developed for the purpose of rapid, inexpensive and easy three dimensional surveys of buildings or small objects, the "structure from motion" photogrammetric approach (SfM) is a purely image based method which could deliver a step-change if transferred to river remote sensing, and requires very little training and is extremely inexpensive. Using the online SfM program Microsoft Photosynth, we have created high-resolution digital elevation models (DEM) of rivers from ordinary photographs produced from a multi-step workflow that takes advantage of free and open source software. This process reconstructs real world scenes from SfM algorithms based on the derived positions of the photographs in three-dimensional space. One of the products of the SfM process is a three-dimensional point cloud of features present in the input photographs. This point cloud can be georeferenced from a small number of ground control points collected via GPS in the field. The georeferenced point cloud can then be used to create a variety of digital elevation model products. Among several study sites, we examine the applicability of SfM in the Pedernales River in Texas (USA), where several hundred images taken from a hand-held helikite are used to produce DEMs of the fluvial topographic environment. This test shows that SfM and low-altitude platforms can produce point clouds with point densities considerably better than airborne LiDAR, with

  3. Ontology patterns for complex topographic feature yypes

    USGS Publications Warehouse

    Varanka, Dalia E.

    2011-01-01

    Complex feature types are defined as integrated relations between basic features for a shared meaning or concept. The shared semantic concept is difficult to define in commonly used geographic information systems (GIS) and remote sensing technologies. The role of spatial relations between complex feature parts was recognized in early GIS literature, but had limited representation in the feature or coverage data models of GIS. Spatial relations are more explicitly specified in semantic technology. In this paper, semantics for topographic feature ontology design patterns (ODP) are developed as data models for the representation of complex features. In the context of topographic processes, component assemblages are supported by resource systems and are found on local landscapes. The topographic ontology is organized across six thematic modules that can account for basic feature types, resource systems, and landscape types. Types of complex feature attributes include location, generative processes and physical description. Node/edge networks model standard spatial relations and relations specific to topographic science to represent complex features. To demonstrate these concepts, data from The National Map of the U. S. Geological Survey was converted and assembled into ODP.

  4. Oil Exploration Mapping

    NASA Technical Reports Server (NTRS)

    1994-01-01

    After concluding an oil exploration agreement with the Republic of Yemen, Chevron International needed detailed geologic and topographic maps of the area. Chevron's remote sensing team used imagery from Landsat and SPOT, combining images into composite views. The project was successfully concluded and resulted in greatly improved base maps and unique topographic maps.

  5. Planetary maps

    USGS Publications Warehouse

    ,

    1992-01-01

    An important goal of the USGS planetary mapping program is to systematically map the geology of the Moon, Mars, Venus, and Mercury, and the satellites of the outer planets. These geologic maps are published in the USGS Miscellaneous Investigations (I) Series. Planetary maps on sale at the USGS include shaded-relief maps, topographic maps, geologic maps, and controlled photomosaics. Controlled photomosaics are assembled from two or more photographs or images using a network of points of known latitude and longitude. The images used for most of these planetary maps are electronic images, obtained from orbiting television cameras, various optical-mechanical systems. Photographic film was only used to map Earth's Moon.

  6. Topographic Mapping of Residual Vision by Computer

    ERIC Educational Resources Information Center

    MacKeben, Manfred

    2008-01-01

    Many persons with low vision have diseases that damage the retina only in selected areas, which can lead to scotomas (blind spots) in perception. The most frequent of these diseases is age-related macular degeneration (AMD), in which foveal vision is often impaired by a central scotoma that impairs vision of fine detail and causes problems with…

  7. Accurately mapping the location of the binding site for the interaction between hepatitis B virus X protein and cytochrome c oxidase III

    PubMed Central

    LI, DAN; DING, JIAN; CHEN, ZHIXIN; CHEN, YUN; LIN, NA; CHEN, FENGLIN; WANG, XIAOZHONG

    2015-01-01

    The hepatitis B virus (HBV) X protein (HBx) plays an important pathogenetic role in hepatocarcinoma tumorigenesis. As HBx does not have the ability to bind to double-stranded DNA (dsDNA), protein-protein interaction is crucial for HBx functions. In a previous study, we screened a novel HBx-interacting protein, the cytochrome c oxidase subunit III (COXIII). In the present study, we aimed to accurately map the location of the binding site for the interaction of HBx with COXIII. Two fragments of HBx mutants (X1 aa1-72 and X2 aa1-117) were amplified by polymerase chain reaction (PCR) and separately inserted into the pAS2-1 plasmid. PCR and gene sequencing confirmed the correct insertion of the mutant fragments in the plasmid. The tanscription of the mutant fragments in yeast cells was demonstrated by RT-PCR and western blot analysis confirmed that they were accurately translated into fusion proteins. Hybridization on solid medium and the detection of β-galactosidase (β-gal) activity indicated that the binding site for the interaction between HBx and COXIII was located between aa72 and aa117. Specific interactions between the HBxX2 protein and COXIII were verified by co-immunoprecipitation. To the best of our knowledge, this is the first study showing to demonstrate that aa72-117 in HBx is the key region for binding with COXIII. PMID:25483779

  8. Generating Solid Models from Topographical Data

    NASA Technical Reports Server (NTRS)

    Keller, John W.

    2005-01-01

    A method of generating solid models of terrain involves the conversion of topographical data into a form useable by a rapid-prototyping (RP) machine. The method was developed to enable the use of the RP machine to make solid models of Martian terrain from Mars Orbiter laser-altimeter topographical data. The method is equally applicable to the generation of models of the terrains of other astronomical bodies, including other planets, asteroids, and Earth. Topographical data describe a terrain in terms of a set of three-dimensional coordinates [e.g., Cartesian (x,y,z) or polar (latitude, longitude, radius) coordinates] of points or nodes on the terrain surface. The input data for the RP machines are required to provide a three-dimensional description, not of a single surface, but of a volume in this case, a ground volume that underlies the terrain surface. The description is required to be in the form of triangular elements that connect the nodes of all the surfaces and that completely bound the volume, with no open areas, no overlap of triangles, and no extraneous geometric elements. The software used in the present model-generation method was written in IDL - an advanced programming language that affords a number of tools, including subroutines that triangularize surfaces. The software creates a volume from the topographical surface data by adding sides to the edges of the terrain surface and joining the sides with a bottom surface. Each of the sides is triangularized by use of IDL subroutines, and then the software searches for extraneous elements and removes them. Topographical data are usually presented in a grid corresponding to polar coordinates, so that a model generated from such data is equivalent to a topographical map in Mercator projection. However an RP machine is fully capable of including the curvature of a planetary body in a model that it makes. Therefore, the software also offers a capability to transform the topographical data to a projection onto

  9. Identification of protein O-glycosylation site and corresponding glycans using liquid chromatography-tandem mass spectrometry via mapping accurate mass and retention time shift.

    PubMed

    Huang, Li-Juan; Lin, Jen-Hui; Tsai, Jung-Heng; Chu, Yen-Yin; Chen, Yen-Wen; Chen, Shun-Li; Chen, Shu-Hui

    2014-12-05

    We reported an improved combinatorial approach for identifying site-specific O-glycosylation using both glycan cleaved and non-cleaved methods. In this approach, a non-reducing β-elimination kit coupled with non-specific enzymes performed efficient digestion, O-glycan cleavage, and partial dephosphorylation without significant side reactions, thus enabling an automatic database search for the cleaved O-glycosylation or serine/threonine (S/T) phosphorylation sites. From the same sample concurrently prepared without β-elimination, the corresponding intact O-glycopeptides were mapped by accurate precursor ion mass using an in-house glycan database majorly composed of GalNAc (mucin-type) core and the retention-time shift (ΔRt). Each glycopeptide assignment was verified by the detection of glycan-specific fragments using collision-induced dissociation (CID) to estimate False Discovery Rate (FDR). Using fetuin as a model, all identified S/T elimination sites were matched to multiple intact glycopeptides with a 31% FDR. This considerably reduced to 0% FDR by ΔRt filtering. This approach was then applied to a protein mixture composed of therapeutic Factor IX and Enbrel(®) mixed with fetuin and kappa-casein. A total of 26 glycosylation sites each of which corresponds to 1-4 glycans were positively mapped and confirmed. The FDR decreased from 33% to 3.3% by ΔRt filtering and exclusion of repeated peptide tags that covered the same glycosylation sites. Moreover, the phosphorylation and O-glycosylation on the same site such as T159 of Factor IX and T170 of kappa-casein were able to be unambiguously differentiated. Thus, our approach is useful for in-depth characterization of site-specific O-glycosylation of a simple mixture such as protein-based therapeutics.

  10. Cornea Optical Topographical Scan System (COTSS)

    NASA Technical Reports Server (NTRS)

    1986-01-01

    The Cornea Optical Topographical Scan System (COTSS) is an instrument designed for use by opthalmologist to aid in performing surgical procedures such as radial keratotomy and to provide quick accurate data to aid in prescribing contact lenses and eyeglasses. A breadboard of the system was built and demonstrated in June of 1984. Additional refinements to the breadboard are needed to meet systems requirements prior to proceeding with prototype development. The present status of the COTSS instrument is given and the areas in which system refinements are required, are defined.

  11. Cornea Optical Topographical Scan System (COTSS)

    NASA Astrophysics Data System (ADS)

    1986-08-01

    The Cornea Optical Topographical Scan System (COTSS) is an instrument designed for use by opthalmologist to aid in performing surgical procedures such as radial keratotomy and to provide quick accurate data to aid in prescribing contact lenses and eyeglasses. A breadboard of the system was built and demonstrated in June of 1984. Additional refinements to the breadboard are needed to meet systems requirements prior to proceeding with prototype development. The present status of the COTSS instrument is given and the areas in which system refinements are required, are defined.

  12. Accurate and Fully Automatic Hippocampus Segmentation Using Subject-Specific 3D Optimal Local Maps Into a Hybrid Active Contour Model

    PubMed Central

    Gkontra, Polyxeni; Daras, Petros; Maglaveras, Nicos

    2014-01-01

    Assessing the structural integrity of the hippocampus (HC) is an essential step toward prevention, diagnosis, and follow-up of various brain disorders due to the implication of the structural changes of the HC in those disorders. In this respect, the development of automatic segmentation methods that can accurately, reliably, and reproducibly segment the HC has attracted considerable attention over the past decades. This paper presents an innovative 3-D fully automatic method to be used on top of the multiatlas concept for the HC segmentation. The method is based on a subject-specific set of 3-D optimal local maps (OLMs) that locally control the influence of each energy term of a hybrid active contour model (ACM). The complete set of the OLMs for a set of training images is defined simultaneously via an optimization scheme. At the same time, the optimal ACM parameters are also calculated. Therefore, heuristic parameter fine-tuning is not required. Training OLMs are subsequently combined, by applying an extended multiatlas concept, to produce the OLMs that are anatomically more suitable to the test image. The proposed algorithm was tested on three different and publicly available data sets. Its accuracy was compared with that of state-of-the-art methods demonstrating the efficacy and robustness of the proposed method. PMID:27170866

  13. Topographic representation of the human body in the occipitotemporal cortex.

    PubMed

    Orlov, Tanya; Makin, Tamar R; Zohary, Ehud

    2010-11-04

    Large-scale topographic representations of the body have long been established in the somatosensory and motor cortices. Using functional imaging, we identified a topographically organized body part map within the occipitotemporal cortex (OTC), with distinct clusters of voxels showing clear preference for different visually presented body parts. This representation was consistent both across hemispheres and participants. Using converging methods, the preference for specific body parts was demonstrated to be robust and did not merely reflect shape differences between the categories. Finally, execution of (unseen) movements with different body parts resulted in a limited topographic representation of the limbs and trunk, which partially overlapped with the visual body part map. This motor-driven activation in the OTC could not be explained solely by visual or motor imagery of the body parts. This suggests that visual and motor-related information converge within the OTC in a body part specific manner.

  14. USGS maps

    USGS Publications Warehouse

    ,

    2005-01-01

    Discover a small sample of the millions of maps produced by the U.S. Geological Survey (USGS) in its mission to map the Nation and survey its resources. This booklet gives a brief overview of the types of maps sold and distributed by the USGS through its Earth Science Information Centers (ESIC) and also available from business partners located in most States. The USGS provides a wide variety of maps, from topographic maps showing the geographic relief and thematic maps displaying the geology and water resources of the United States, to special studies of the moon and planets.

  15. Preliminary Geomorphic Map of the Kitsap Peninsula, Washington

    USGS Publications Warehouse

    Haugerud, Ralph A.

    2009-01-01

    The Kitsap Peninsula, in the center of the Puget Lowland of Washington State, has been glaciated repeatedly during the last 2 million years. This geologic history is significant to our understanding of crustal deformation, ground- and surface-water resources, the distribution of fishes, and other topics. Recent high-resolution lidar (LIght Detection And Ranging; also known as airborne laser swath mapping, or ALSM) topographic surveys of much of the Puget Lowland provide a more accurate depiction of the morphology of this forested landscape than has previously been available. More accurate morphology promises more accurate mapping of unconsolidated deposits and a more detailed earth history, particularly in this low-relief forested region where outcrops are not abundant and many deposits are similar in composition. In order to clarify the chain of observation and inference that proceeds from morphology to geologic map, this map describes the distribution of morphologic units - the 2-dimensional surfaces that bound near-surface deposits.

  16. Wall-to-Wall 1-m Topographic Coverage of the Mars Science Laboratory Candidate Landing Sites

    NASA Astrophysics Data System (ADS)

    Kirk, R. L.; Howington-Kraus, E.; Galuszka, D.; Redding, B.; Antonsen, J.; Coker, K.; Foster, E.; Hopkins, M.; Licht, A.; Fennema, A.; Calef, F.; Nuti, S.; Parker, T. J.; Golombek, M. P.

    2011-03-01

    Nearly complete 1 m/post-topographic models of the MSL landing ellipses contain more height points than the MOLA global dataset, supporting site safety validation, rover traverse planning, and assessment of the accuracy of HiRISE stereo mapping.

  17. The National Map - Orthoimagery

    USGS Publications Warehouse

    Mauck, James; Brown, Kim; Carswell, William J.

    2009-01-01

    Orthorectified digital aerial photographs and satellite images of 1-meter (m) pixel resolution or finer make up the orthoimagery component of The National Map. The process of orthorectification removes feature displacements and scale variations caused by terrain relief and sensor geometry. The result is a combination of the image characteristics of an aerial photograph or satellite image and the geometric qualities of a map. These attributes allow users to: *Measure distance *Calculate areas *Determine shapes of features *Calculate directions *Determine accurate coordinates *Determine land cover and use *Perform change detection *Update maps The standard digital orthoimage is a 1-m or finer resolution, natural color or color infra-red product. Most are now produced as GeoTIFFs and accompanied by a Federal Geographic Data Committee (FGDC)-compliant metadata file. The primary source for 1-m data is the National Agriculture Imagery Program (NAIP) leaf-on imagery. The U.S. Geological Survey (USGS) utilizes NAIP imagery as the image layer on its 'Digital- Map' - a new generation of USGS topographic maps (http://nationalmap.gov/digital_map). However, many Federal, State, and local governments and organizations require finer resolutions to meet a myriad of needs. Most of these images are leaf-off, natural-color products at resolutions of 1-foot (ft) or finer.

  18. Volunteer map data collection at the USGS

    USGS Publications Warehouse

    Eric, B. Wolf; Poore, Barbara S.; Caro, Holly K.; Matthews, Greg D.

    2011-01-01

    Since 1994, citizen volunteers have helped the U.S. Geological Survey (USGS) improve its topographic maps. Through the Earth Science Corps program, citizens were able to "adopt a quad" and collect new information and update existing map features. Until its conclusion in 2001, as many as 300 volunteers annotated paper maps which were incorporated into the USGS topographic-map revision process.

  19. Terrestrial Ecosystems - Topographic Moisture Potential of the Conterminous United States

    USGS Publications Warehouse

    Cress, Jill J.; Sayre, Roger G.; Comer, Patrick; Warner, Harumi

    2009-01-01

    As part of an effort to map terrestrial ecosystems, the U.S. Geological Survey has generated topographic moisture potential classes to be used in creating maps depicting standardized, terrestrial ecosystem models for the conterminous United States, using an ecosystems classification developed by NatureServe. A biophysical stratification approach, developed for South America and now being implemented globally, was used to model the ecosystem distributions. Substrate moisture regimes strongly influence the differentiation and distribution of terrestrial ecosystems, and therefore topographic moisture potential is one of the key input layers in this biophysical stratification. The method used to produce these topographic moisture potential classes was based on the derivation of ground moisture potential using a combination of computed topographic characteristics (CTI, slope, and aspect) and mapped National Wetland Inventory (NWI) boundaries. This method does not use climate or soil attributes to calculate relative topographic moisture potential since these characteristics are incorporated into the ecosystem model though other input layers. All of the topographic data used for this assessment were derived from the USGS 30-meter National Elevation Dataset (NED ) including the National Compound Topographic Index (CTI). The CTI index is a topographically derived measure of slope for a raster cell and the contributing area from upstream raster cells, and thus expresses potential for water flow to a point. In other words CTI data are 'a quantification of the position of a site in the local landscape', where the lowest values indicate ridges and the highest values indicate stream channels, lakes and ponds. These CTI values were compared to independent estimates of water accumulation by obtaining geospatial data from a number of sample locations representing two types of NWI boundaries: freshwater emergent wetlands and freshwater forested/shrub wetlands. Where these shorelines

  20. The Importance of Measurement Errors for Deriving Accurate Reference Leaf Area Index Maps for Validation of Moderate-Resolution Satellite LAI Products

    NASA Technical Reports Server (NTRS)

    Huang, Dong; Yang, Wenze; Tan, Bin; Rautiainen, Miina; Zhang, Ping; Hu, Jiannan; Shabanov, Nikolay V.; Linder, Sune; Knyazikhin, Yuri; Myneni, Ranga B.

    2006-01-01

    The validation of moderate-resolution satellite leaf area index (LAI) products such as those operationally generated from the Moderate Resolution Imaging Spectroradiometer (MODIS) sensor data requires reference LAI maps developed from field LAI measurements and fine-resolution satellite data. Errors in field measurements and satellite data determine the accuracy of the reference LAI maps. This paper describes a method by which reference maps of known accuracy can be generated with knowledge of errors in fine-resolution satellite data. The method is demonstrated with data from an international field campaign in a boreal coniferous forest in northern Sweden, and Enhanced Thematic Mapper Plus images. The reference LAI map thus generated is used to assess modifications to the MODIS LAI/fPAR algorithm recently implemented to derive the next generation of the MODIS LAI/fPAR product for this important biome type.

  1. Complex Topographic Feature Ontology Patterns

    USGS Publications Warehouse

    Varanka, Dalia E.; Jerris, Thomas J.

    2015-01-01

    Semantic ontologies are examined as effective data models for the representation of complex topographic feature types. Complex feature types are viewed as integrated relations between basic features for a basic purpose. In the context of topographic science, such component assemblages are supported by resource systems and found on the local landscape. Ontologies are organized within six thematic modules of a domain ontology called Topography that includes within its sphere basic feature types, resource systems, and landscape types. Context is constructed not only as a spatial and temporal setting, but a setting also based on environmental processes. Types of spatial relations that exist between components include location, generative processes, and description. An example is offered in a complex feature type ‘mine.’ The identification and extraction of complex feature types are an area for future research.

  2. Topographical pathways guide chemical microswimmers

    PubMed Central

    Simmchen, Juliane; Katuri, Jaideep; Uspal, William E.; Popescu, Mihail N.; Tasinkevych, Mykola; Sánchez, Samuel

    2016-01-01

    Achieving control over the directionality of active colloids is essential for their use in practical applications such as cargo carriers in microfluidic devices. So far, guidance of spherical Janus colloids was mainly realized using specially engineered magnetic multilayer coatings combined with external magnetic fields. Here we demonstrate that step-like submicrometre topographical features can be used as reliable docking and guiding platforms for chemically active spherical Janus colloids. For various topographic features (stripes, squares or circular posts), docking of the colloid at the feature edge is robust and reliable. Furthermore, the colloids move along the edges for significantly long times, which systematically increase with fuel concentration. The observed phenomenology is qualitatively captured by a simple continuum model of self-diffusiophoresis near confining boundaries, indicating that the chemical activity and associated hydrodynamic interactions with the nearby topography are the main physical ingredients behind the observed behaviour. PMID:26856370

  3. 47 CFR 80.757 - Topographical data.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 47 Telecommunication 5 2011-10-01 2011-10-01 false Topographical data. 80.757 Section 80.757... MARITIME SERVICES Standards for Computing Public Coast Station VHF Coverage § 80.757 Topographical data. (a... elevations from a 30 second point or better topographic data file such as those available for the...

  4. 47 CFR 80.757 - Topographical data.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 47 Telecommunication 5 2014-10-01 2014-10-01 false Topographical data. 80.757 Section 80.757... MARITIME SERVICES Standards for Computing Public Coast Station VHF Coverage § 80.757 Topographical data. (a... elevations from a 30 second point or better topographic data file such as those available for the...

  5. 47 CFR 80.757 - Topographical data.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 47 Telecommunication 5 2012-10-01 2012-10-01 false Topographical data. 80.757 Section 80.757... MARITIME SERVICES Standards for Computing Public Coast Station VHF Coverage § 80.757 Topographical data. (a... elevations from a 30 second point or better topographic data file such as those available for the...

  6. 47 CFR 80.757 - Topographical data.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 47 Telecommunication 5 2010-10-01 2010-10-01 false Topographical data. 80.757 Section 80.757... MARITIME SERVICES Standards for Computing Public Coast Station VHF Coverage § 80.757 Topographical data. (a... elevations from a 30 second point or better topographic data file such as those available for the...

  7. 47 CFR 80.757 - Topographical data.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 47 Telecommunication 5 2013-10-01 2013-10-01 false Topographical data. 80.757 Section 80.757... MARITIME SERVICES Standards for Computing Public Coast Station VHF Coverage § 80.757 Topographical data. (a... elevations from a 30 second point or better topographic data file such as those available for the...

  8. SNP-array based whole genome homozygosity mapping: a quick and powerful tool to achieve an accurate diagnosis in LGMD2 patients.

    PubMed

    Papić, Lea; Fischer, Dirk; Trajanoski, Slave; Höftberger, Romana; Fischer, Carina; Ströbel, Thomas; Schmidt, Wolfgang M; Bittner, Reginald E; Schabhüttl, Maria; Gruber, Karin; Pieber, Thomas R; Janecke, Andreas R; Auer-Grumbach, Michaela

    2011-01-01

    A large number of novel disease genes have been identified by homozygosity mapping and the positional candidate approach. In this study we used single nucleotide polymorphism (SNP) array-based, whole genome homozygosity mapping as the first step to a molecular diagnosis in the highly heterogeneous muscle disease, limb girdle muscular dystrophy (LGMD). In a consanguineous family, both affected siblings showed homozygous blocks on chromosome 15 corresponding to the LGMD2A locus. Direct sequencing of CAPN3, encoding calpain-3, identified a homozygous deletion c.483delG (p.Ile162SerfsX17). In a sporadic LGMD patient complete absence of caveolin-3 on Western blot was observed. However, a mutation in CAV3 could not be detected. Homozygosity mapping revealed a large homozygous block at the LGMD2I locus, and direct sequencing of FKRP encoding fukutin-related-protein detected the common homozygous c.826 C>A (p.Leu276Ile) mutation. Subsequent re-examination of this patient's muscle biopsy showed aberrant α-dystroglycan glycosylation. In summary, we show that whole-genome homozygosity mapping using low cost SNP arrays provides a fast and non-invasive method to identify disease-causing mutations in sporadic patients or sibs from consanguineous families in LGMD2. Furthermore, this is the first study describing that in addition to PTRF, encoding polymerase I and transcript release factor, FKRP mutations may cause secondary caveolin-3 deficiency.

  9. Infrasound and the avian navigational map

    USGS Publications Warehouse

    Hagstrum, J.T.

    2001-01-01

    Birds can accurately navigate over hundreds to thousands of kilometres, and use celestial and magnetic compass senses to orient their flight. How birds determine their location in order to select the correct homeward bearing (map sense) remains controversial, and has been attributed to their olfactory or magnetic senses. Pigeons can hear infrasound down to 0??05 Hz, and an acoustic avian map is proposed consisting of infrasonic cues radiated from steep-sided topographic features. The source of these infrasonic signals is microseisms continuously generated by interfering oceanic waves. Atmospheric processes affecting the infrasonic map cues can explain perplexing experimental results from pigeon releases. Moreover, four recent disrupted pigeon races in Europe and the north-eastern USA intersected infrasonic shock waves from the Concorde supersonic transport. Having an acoustic map might also allow clock-shifted birds to test their homeward progress and select between their magnetic and solar compasses.

  10. Digital floodplain mapping and an analysis of errors involved

    USGS Publications Warehouse

    Hamblen, C.S.; Soong, D.T.; Cai, X.

    2007-01-01

    Mapping floodplain boundaries using geographical information system (GIS) and digital elevation models (DEMs) was completed in a recent study. However convenient this method may appear at first, the resulting maps potentially can have unaccounted errors. Mapping the floodplain using GIS is faster than mapping manually, and digital mapping is expected to be more common in the future. When mapping is done manually, the experience and judgment of the engineer or geographer completing the mapping and the contour resolution of the surface topography are critical in determining the flood-plain and floodway boundaries between cross sections. When mapping is done digitally, discrepancies can result from the use of the computing algorithm and digital topographic datasets. Understanding the possible sources of error and how the error accumulates through these processes is necessary for the validation of automated digital mapping. This study will evaluate the procedure of floodplain mapping using GIS and a 3 m by 3 m resolution DEM with a focus on the accumulated errors involved in the process. Within the GIS environment of this mapping method, the procedural steps of most interest, initially, include: (1) the accurate spatial representation of the stream centerline and cross sections, (2) properly using a triangulated irregular network (TIN) model for the flood elevations of the studied cross sections, the interpolated elevations between them and the extrapolated flood elevations beyond the cross sections, and (3) the comparison of the flood elevation TIN with the ground elevation DEM, from which the appropriate inundation boundaries are delineated. The study area involved is of relatively low topographic relief; thereby, making it representative of common suburban development and a prime setting for the need of accurately mapped floodplains. This paper emphasizes the impacts of integrating supplemental digital terrain data between cross sections on floodplain delineation

  11. Topographic change detection at select archeological sites in Grand Canyon National Park, Arizona, 2007–2010

    USGS Publications Warehouse

    Collins, Brian D.; Corbett, Skye C.; Fairley, Helen C.; Minasian, Diane L.; Kayen, Robert; Dealy, Timothy P.; Bedford, David R.

    2012-01-01

    Human occupation in Grand Canyon, Arizona, dates from at least 11,000 years before present to the modern era. For most of this period, the only evidence of human occupation in this iconic landscape is provided by archeological sites. Because of the dynamic nature of this environment, many archeological sites are subject to relatively rapid topographic change. Quantifying the extent, magnitude, and cause of such change is important for monitoring and managing these archeological sites. Such quantification is necessary to help inform the continuing debate on whether and how controlled releases from Glen Canyon Dam, located immediately upstream of Grand Canyon National Park, are affecting site erosion rates, artifact transport, and archeological resource preservation along the Colorado River in Grand Canyon. Although long-term topographic change resulting from a variety of natural processes is inherent in the Grand Canyon region, continued erosion of archeological sites threatens both the archeological resources and our future ability to study evidence of past cultural habitation. Thus, this subject is of considerable interest to National Park Service managers and other stakeholders in the Glen Canyon Dam Adaptive Management Program. Understanding the causes and effects of archeological site erosion requires a knowledge of several factors, including the location, timing, and magnitude of the changes occurring in relation to archeological resources, the rates of change, and the relative contribution of potential causes. These potential causes include sediment depletion associated with managed flows from Glen Canyon Dam, site-specific weather and overland flow patterns, visitor impacts, and long-term regional climate change. To obtain this information, highly accurate, spatially specific data are needed from sites undergoing change. Using terrestrial lidar techniques, and building upon three previous surveys of archeological sites performed in 2006 and 2007, we

  12. Using maps in genealogy

    USGS Publications Warehouse

    ,

    1999-01-01

    Maps are one of many sources you may need to complete a family tree. In genealogical research, maps can provide clues to where our ancestors may have lived and where to look for written records about them. Beginners should master basic genealogical research techniques before starting to use topographic maps.

  13. A Topographic Field Trip of Washington, D.C. - A Cartographic Multimedia Application

    USGS Publications Warehouse

    ,

    1999-01-01

    The U.S. Geological Survey (USGS) has produced ?A Topographic Field Trip of Washington, D.C.,' a multimedia CD-ROM that uses topographic maps to tour Washington, D.C. Although designed for the middle school grade level, it can also be used to teach introductory topographic map reading skills to any level. Two versions of ?A Topographic Field Trip of Washington, D.C.,? are available. The first version, for Macintosh? systems only, was developed and produced as a prototype with educational resources funds and is available free of charge. The second version, for dual platforms, Macintosh?, and Windows? systems, is a sales item. The dual platform version contains improvements in content and navigational capabilities.

  14. Topographic controls on moraine distribution

    NASA Astrophysics Data System (ADS)

    Barr, Iestyn; Lovell, Harold

    2014-05-01

    Ice-marginal moraines are a foundation of our understanding of the extent and fluctuations of palaeoglaciers, and are often used as indirect proxies for palaeoclimate; this link is based on the assumption that moraine distribution is palaeoclimatically-controlled. Here, we use a dataset of ~8,500 ice-marginal moraines to assess the role played by topography in regulating their distribution, and challenge the assumption that moraines can be readily used as indirect proxies for palaeoclimate. We find evidence that topography plays an important role in moraine formation, preservation and ease of identification. At a global scale, this is reflected by 'erosional feedback', which leads to the gradual reduction in ice extent over successive glacial cycles, and the preservation of detailed moraine records. At a regional scale (e.g. the scale of individual mountain massifs), erosional feedback remains important, but other factors, such as the propensity for moraines to form at topographic 'pinning points', are also significant. At a local scale (e.g. for cirque-type glaciers), erosional feedback is less significant, but factors such as physical barriers to ice flow are important. We conclude by suggesting that: (i) palaeoclimatic significance should not automatically be attached to moraine positions; (ii) chronologically grouping (or correlating) moraines on the basis of their geospatial distribution should be undertaken with caution; (iii) where possible, topographic factors should be taken into consideration when using moraines to reconstruct the dimensions of palaeoglaciers, particularly when making links to palaeoclimate.

  15. Image processing of HCMM-satellite thermal images for superposition with other satellite imagery and topographic and thematic maps. [Upper Rhine River Valley and surrounding highlands Switzerland, Germany, and France

    NASA Technical Reports Server (NTRS)

    Gossmann, H.; Haberaecker, P. (Principal Investigator)

    1980-01-01

    The southwestern part of Central Europe between Basal and Frankfurt was used in a study to determine the accuracy with which a regionally bounded HCMM scene could be rectified with respect to a preassigned coordinate system. The scale to which excerpts from HCMM data can be sensibly enlarged and the question of how large natural structures must be in order to be identified in a satellite thermal image with the given resolution were also examined. Relief and forest and population distribution maps and a land use map derived from LANDSAT data were digitalized and adapted to a common reference system and then combined in a single multichannel data system. The control points for geometrical rectification were determined using the coordinates of the reference system. The multichannel scene was evaluated in several different manners such as the correlation of surface temperature and relief, surface temperature and land use, or surface temperature and built up areas.

  16. Publication of topographic atlas and control network of Mars

    NASA Technical Reports Server (NTRS)

    Wu, Sherman S. C.; Billideau, Jennifer S.; Spare, Beth A.

    1991-01-01

    To aid planetary studies and the planning of future Mars missions, the Topographic Atlas and Control Network for Mars will be submitted by the end of fiscal year 1992 for publication as a NASA Special Publication. It will consist of reduced versions of 108 1:2 million-scale photomosaics that show contour lines from topographic maps at the same scale, as well as precisely located control points. The control points are from the planetwide network, which is not only instrumental in the compilation of maps at various scales, but is also widely used in other research such as studies of Mars' gravity and atmosphere. An example, a combination of MC 8-NW and -SW, of the photomosaics to be included in the atlas is presented. Contour lines in the figure are at 1-km intervals. The final adjusted ground coordinates and elevations of the 77 control points shown are given in table form. The last column in the table lists the topographic datum (zero elevation) that can be used to compute the solid radius of the control point from the center of mass of Mars. The atlas will also include information such as the adjusted C-matrices of each image, descriptions of the methods used, and their accuracy, and guidelines for users.

  17. The Need for Accurate Risk Prediction Models for Road Mapping, Shared Decision Making and Care Planning for the Elderly with Advanced Chronic Kidney Disease.

    PubMed

    Stryckers, Marijke; Nagler, Evi V; Van Biesen, Wim

    2016-11-01

    As people age, chronic kidney disease becomes more common, but it rarely leads to end-stage kidney disease. When it does, the choice between dialysis and conservative care can be daunting, as much depends on life expectancy and personal expectations of medical care. Shared decision making implies adequately informing patients about their options, and facilitating deliberation of the available information, such that decisions are tailored to the individual's values and preferences. Accurate estimations of one's risk of progression to end-stage kidney disease and death with or without dialysis are essential for shared decision making to be effective. Formal risk prediction models can help, provided they are externally validated, well-calibrated and discriminative; include unambiguous and measureable variables; and come with readily applicable equations or scores. Reliable, externally validated risk prediction models for progression of chronic kidney disease to end-stage kidney disease or mortality in frail elderly with or without chronic kidney disease are scant. Within this paper, we discuss a number of promising models, highlighting both the strengths and limitations physicians should understand for using them judiciously, and emphasize the need for external validation over new development for further advancing the field.

  18. An accurate, analytical, and technology-mapped definition of the surface potential at threshold and a new postulate for the threshold voltage of MOSFETs

    NASA Astrophysics Data System (ADS)

    Sarkar, Vaskar; Dutta, Aloke K.

    2006-11-01

    A novel approach of defining the threshold voltage for long channel MOSFETs has been presented in this paper, where it has been proposed that it corresponds to the gate-to-source voltage for which the drift and diffusion components of the total drain current become equal to each other. In order to avoid the greater computation time associated with the numerical solution of these two components, an analytical expression of the surface potential, corresponding to the threshold condition, is given here, which has the same functional form as the one proposed by Tsividis. The fuzzy parameter n, appearing in this expression of the surface potential, is expressed as a function of the substrate doping density ( NA) and the oxide thickness ( tox). The threshold voltage values, obtained analytically from the relation between the surface potential at the threshold condition and the closed-form technology-mapped expression of the fuzzy parameter n, show an excellent match with those obtained from SILVACO simulations for a wide range of NA and tox, with the maximum error being only about 4%. The comparison of the percent error values of the threshold voltage obtained from this proposed model with those obtained from the other two recently proposed methods, all with respect to SILVACO simulation results, further verifies the validity of our completely analytical, mathematically simple, and straight-forward approach, proposed in this work here.

  19. Images and topographic relief at the north pole of Venus

    NASA Technical Reports Server (NTRS)

    Leberl, Franz W.; Maurice, Kelly E.; Thomas, John K.; Leff, Craig E.; Wall, Stephen D.

    1992-01-01

    The analysis of unique coverage of the north pole of Venus using a subset of 13 images from a total of about 775 synthetic aperture radar orbits during cycle 1 of the Magellan mission is reported. Images at 13 distinctly different azimuths are reported that range over 360 deg in longitude and that show the topographic relief at vastly different imaging geometries at intervals of about 20 deg. A pair of intersecting or crossing orbits is used to assess the topographic relief with stereo radargrammetric techniques, and to refine this assessment using a multiimage clinometric approach. It is shown that the pole is located in accentuated topography with elevation differences in the range of no more than 1 km. It is concluded that pinpointing the location of the pole from the overlapping images and standard mission data is accurate to within about 100 pixels or 8 km (RMS).

  20. Geologic map of Mars

    USGS Publications Warehouse

    Tanaka, Kenneth L.; Skinner, James A.; Dohm, James M.; Irwin, Rossman P.; Kolb, Eric J.; Fortezzo, Corey M.; Platz, Thomas; Michael, Gregory G.; Hare, Trent M.

    2014-01-01

    This global geologic map of Mars, which records the distribution of geologic units and landforms on the planet's surface through time, is based on unprecedented variety, quality, and quantity of remotely sensed data acquired since the Viking Orbiters. These data have provided morphologic, topographic, spectral, thermophysical, radar sounding, and other observations for integration, analysis, and interpretation in support of geologic mapping. In particular, the precise topographic mapping now available has enabled consistent morphologic portrayal of the surface for global mapping (whereas previously used visual-range image bases were less effective, because they combined morphologic and albedo information and, locally, atmospheric haze). Also, thermal infrared image bases used for this map tended to be less affected by atmospheric haze and thus are reliable for analysis of surface morphology and texture at even higher resolution than the topographic products.

  1. LULC Classification and Topographic Correction of Landsat-7 ETM+ Imagery in the Yangjia River Watershed: the Influence of DEM Resolution.

    PubMed

    Gao, Yongnian; Zhang, Wanchang

    2009-01-01

    DEM-based topographic corrections on Landsat-7 ETM+ imagery from rugged terrain, as an effective processing techniques to improve the accuracy of Land Use/Land Cover (LULC) classification as well as land surface parameter retrievals with remotely sensed data, has been frequently reported in the literature. However, few studies have investigated the exact effects of DEM with different resolutions on the correction of imagery. Taking the topographic corrections on the Landsat-7 ETM+ images acquired from the rugged terrain of the Yangjiahe river basin (P.R. China) as an example, the present work systematically investigates such issues by means of two commonly used topographic correction algorithms with the support of different spatial resolution DEMs. After the pre-processing procedures, i.e. atmospheric correction and geo-registration, were applied to the ETM+ images, two topographic correction algorithms, namely SCS correction and Minnaert correction, were applied to assess the effects of different spatial resolution DEMs obtained from two sources in the removal of topographic effects and LULC classifications. The results suggested that the topographic effects were tremendously reduced with these two algorithms under the support of different spatial resolution DEMs, and the performance of the topographic correction with the 1:50,000-topographic-map DEM was similar to that achieved using SRTM DEM. Moreover, when the same topographic correction algorithm was applied the accuracy of LULC classification after topographic correction based on 1:50,000-topographic-map DEM was similar as that based on SRTM DEM, which implies that the 90 m SRTM DEM can be used as an alternative for the topographic correction of ETM+ imagery when high resolution DEM is unavailable.

  2. Kilometer-scale topographic roughness of Mercury: Correlation with geologic features and units

    NASA Astrophysics Data System (ADS)

    Kreslavsky, Mikhail A.; Head, James W.; Neumann, Gregory A.; Zuber, Maria T.; Smith, David E.

    2014-12-01

    We present maps of the topographic roughness of the northern circumpolar area of 30 Mercury at kilometer scales. The maps are derived from range profiles obtained by the 31 Mercury Laser Altimeter (MLA) instrument onboard the MErcury Surface, Space 32 ENvironment, Geochemistry, and Ranging (MESSENGER) mission. As measures of 33 roughness, we used the interquartile range of profile curvature at three baselines: 0.7 km, 34 2.8 km, and 11 km. The maps provide a synoptic overview of variations of typical 35 topographic textures. They show a dichotomy between the smooth northern plains and 36 rougher, more heavily cratered terrains. Analysis of the scale dependence of roughness 37 indicates that the regolith on Mercury is thicker than on the Moon by approximately a 38 factor of three. Roughness contrasts within northern volcanic plains of Mercury indicate a 39 younger unit inside Goethe basin and inside another unnamed stealth basin. These new 40 data permit interplanetary comparisons of topographic roughness.

  3. Kilometer-Scale Topographic Roughness of Mercury: Correlation with Geologic Features and Units

    NASA Technical Reports Server (NTRS)

    Kreslavsky, Mikhail A.; Head, James W.; Neumann, Gregory A.; Zuber, Maria T.; Smith, David E.

    2014-01-01

    We present maps of the topographic roughness of the northern circumpolar area of Mercury at kilometer scales. The maps are derived from range profiles obtained by the Mercury Laser Altimeter (MLA) instrument onboard the MErcury Surface, Space ENvironment, GEochemistry, and Ranging (MESSENGER) mission. As measures of roughness, we used the interquartile range of profile curvature at three baselines: 0.7 kilometers, 2.8 kilometers, and 11 kilometers. The maps provide a synoptic overview of variations of typical topographic textures. They show a dichotomy between the smooth northern plains and rougher, more heavily cratered terrains. Analysis of the scale dependence of roughness indicates that the regolith on Mercury is thicker than on the Moon by approximately a factor of three. Roughness contrasts within northern volcanic plains of Mercury indicate a younger unit inside Goethe basin and inside another unnamed stealth basin. These new data permit interplanetary comparisons of topographic roughness.

  4. Mapping benefits from updated ifsar data in Alaska: improved source data enables better maps

    USGS Publications Warehouse

    Craun, Kari J.

    2015-08-06

    The U.S. Geological Survey (USGS) and partners in other Federal and State agencies are working collaboratively toward Statewide coverage of interferometric synthetic aperture radar (ifsar) elevation data in Alaska. These data will provide many benefits to a wide range of stakeholders and users. Some applications include development of more accurate and highly detailed topographic maps; improvement of surface water information included in the National Hydrography (NHD) and Watershed Boundary Datasets (WBDs); and use in scientific modeling applications such as calculating glacier surface elevation differences over time and estimating tsunami inundation areas.

  5. 47 CFR 73.312 - Topographic data.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 47 Telecommunication 4 2014-10-01 2014-10-01 false Topographic data. 73.312 Section 73.312 Telecommunication FEDERAL COMMUNICATIONS COMMISSION (CONTINUED) BROADCAST RADIO SERVICES RADIO BROADCAST SERVICES FM Broadcast Stations § 73.312 Topographic data. (a) In the preparation of the profile graphs...

  6. 47 CFR 73.312 - Topographic data.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 47 Telecommunication 4 2013-10-01 2013-10-01 false Topographic data. 73.312 Section 73.312 Telecommunication FEDERAL COMMUNICATIONS COMMISSION (CONTINUED) BROADCAST RADIO SERVICES RADIO BROADCAST SERVICES FM Broadcast Stations § 73.312 Topographic data. (a) In the preparation of the profile graphs...

  7. 47 CFR 73.312 - Topographic data.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 47 Telecommunication 4 2012-10-01 2012-10-01 false Topographic data. 73.312 Section 73.312 Telecommunication FEDERAL COMMUNICATIONS COMMISSION (CONTINUED) BROADCAST RADIO SERVICES RADIO BROADCAST SERVICES FM Broadcast Stations § 73.312 Topographic data. (a) In the preparation of the profile graphs...

  8. 47 CFR 73.312 - Topographic data.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 47 Telecommunication 4 2011-10-01 2011-10-01 false Topographic data. 73.312 Section 73.312 Telecommunication FEDERAL COMMUNICATIONS COMMISSION (CONTINUED) BROADCAST RADIO SERVICES RADIO BROADCAST SERVICES FM Broadcast Stations § 73.312 Topographic data. (a) In the preparation of the profile graphs...

  9. 47 CFR 73.312 - Topographic data.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 47 Telecommunication 4 2010-10-01 2010-10-01 false Topographic data. 73.312 Section 73.312 Telecommunication FEDERAL COMMUNICATIONS COMMISSION (CONTINUED) BROADCAST RADIO SERVICES RADIO BROADCAST SERVICES FM Broadcast Stations § 73.312 Topographic data. (a) In the preparation of the profile graphs...

  10. Map Separates

    USGS Publications Warehouse

    ,

    2001-01-01

    U.S. Geological Survey (USGS) topographic maps are printed using up to six colors (black, blue, green, red, brown, and purple). To prepare your own maps or artwork based on maps, you can order separate black-and-white film positives or negatives for any color printed on a USGS topographic map, or for one or more of the groups of related features printed in the same color on the map (such as drainage and drainage names from the blue plate.) In this document, examples are shown with appropriate ink color to illustrate the various separates. When purchased, separates are black-and-white film negatives or positives. After you receive a film separate or composite from the USGS, you can crop, enlarge or reduce, and edit to add or remove details to suit your special needs. For example, you can adapt the separates for making regional and local planning maps or for doing many kinds of studies or promotions by using the features you select and then printing them in colors of your choice.

  11. Manual and Automatic Lineament Mapping: Comparing Results

    NASA Astrophysics Data System (ADS)

    Vaz, D. A.; di Achille, G.; Barata, M. T.; Alves, E. I.

    2008-03-01

    A method for automatic lineament extraction using topographic data is applied on the Thaumasia plateau. A comparison is made between the results that are obtained from the automatic mapping approach and from a traditional tectonic lineament mapping.

  12. Mapping Venus: Modeling the Magellan Mission.

    ERIC Educational Resources Information Center

    Richardson, Doug

    1997-01-01

    Provides details of an activity designed to help students understand the relationship between astronomy and geology. Applies concepts of space research and map-making technology to the construction of a topographic map of a simulated section of Venus. (DDR)

  13. Global order and local disorder in brain maps.

    PubMed

    Rothschild, Gideon; Mizrahi, Adi

    2015-07-08

    Maps serve as a ubiquitous organizing principle in the mammalian brain. In several sensory systems, such as audition, vision, and somatosensation, topographic maps are evident throughout multiple levels of brain pathways. Topographic maps, like retinotopy and tonotopy, persist from the receptor surface up to the cortex. Other maps, such as those of orientation preference in the visual cortex, are first created in the cortex itself. Despite the prevalence of topographic maps, it is still not clear what function they subserve. Although maps are topographically smooth at the macroscale, they are often locally heterogeneous. Here, we review studies describing the anatomy and physiology of topographic maps across various spatial scales, from the smooth macroscale to the heterogeneous local microarchitecture, with emphasis on maps of the visual and auditory systems. We discuss the potential advantages of local heterogeneity in brain maps, how they reflect complex cortical connectivity, and how they may impact sensory coding and local computations.

  14. Positional Accuracy of Airborne Integrated Global Positioning and Inertial Navigation Systems for Mapping in Glen Canyon, Arizona

    USGS Publications Warehouse

    Sanchez, Richard D.; Hothem, Larry D.

    2002-01-01

    High-resolution airborne and satellite image sensor systems integrated with onboard data collection based on the Global Positioning System (GPS) and inertial navigation systems (INS) may offer a quick and cost-effective way to gather accurate topographic map information without ground control or aerial triangulation. The Applanix Corporation?s Position and Orientation Solutions for Direct Georeferencing of aerial photography was used in this project to examine the positional accuracy of integrated GPS/INS for terrain mapping in Glen Canyon, Arizona. The research application in this study yielded important information on the usefulness and limits of airborne integrated GPS/INS data-capture systems for mapping.

  15. Landslides Identification Using Airborne Laser Scanning Data Derived Topographic Terrain Attributes and Support Vector Machine Classification

    NASA Astrophysics Data System (ADS)

    Pawłuszek, Kamila; Borkowski, Andrzej

    2016-06-01

    Since the availability of high-resolution Airborne Laser Scanning (ALS) data, substantial progress in geomorphological research, especially in landslide analysis, has been carried out. First and second order derivatives of Digital Terrain Model (DTM) have become a popular and powerful tool in landslide inventory mapping. Nevertheless, an automatic landslide mapping based on sophisticated classifiers including Support Vector Machine (SVM), Artificial Neural Network or Random Forests is often computationally time consuming. The objective of this research is to deeply explore topographic information provided by ALS data and overcome computational time limitation. For this reason, an extended set of topographic features and the Principal Component Analysis (PCA) were used to reduce redundant information. The proposed novel approach was tested on a susceptible area affected by more than 50 landslides located on Rożnów Lake in Carpathian Mountains, Poland. The initial seven PCA components with 90% of the total variability in the original topographic attributes were used for SVM classification. Comparing results with landslide inventory map, the average user's accuracy (UA), producer's accuracy (PA), and overall accuracy (OA) were calculated for two models according to the classification results. Thereby, for the PCA-feature-reduced model UA, PA, and OA were found to be 72%, 76%, and 72%, respectively. Similarly, UA, PA, and OA in the non-reduced original topographic model, was 74%, 77% and 74%, respectively. Using the initial seven PCA components instead of the twenty original topographic attributes does not significantly change identification accuracy but reduce computational time.

  16. Planetary maps - Passports for the mind

    SciTech Connect

    Anderson, C.M. )

    1990-12-01

    The various types of planetary maps are reviewed. Included are basic descriptions of planimetric, topographic, geologic, and digital maps. It is noted that planimetric maps are pictorial representations of a planet's round surface flattened into a plane, such as controlled photomosaic maps and shaded relief maps. Topographic maps, those usually made with data from altimeters and stereoscopic images, have contour lines indicating the shapes and elevations of landforms. Geologic maps carry additional information about landforms, such as rock types, the processes that formed them, and their relative ages. The International Astronomical Union nomenclature system is briefly discussed, pointing out that the Union often assigns themes to areas to be mapped.

  17. Topographical map series in the Map Room of Institute and Museum of Military History in Budapest, Hungary between 1919-1945: Smaller scale series (1:100,000, 1:200,000, 1:300,000, 1:500,000, 1:750,000) of the territory of Central Europe

    NASA Astrophysics Data System (ADS)

    Jankó, A.; Bánfi, R.

    2009-04-01

    The Royal Hungarian State Mapping Institute kept the smaller scales series of the third military survey of the Austro-Hungarian Monarchy, too, so the scales 1:200,000 and 1:750,000 maps. The results of the supervisions of larger scales were transferred onto these scales, 1:200,000 and 1:750,000 maps, for the territory of Central Europe. In 1943 a scale 1:500,000 aerial map was accomplished, too, for the territory of Pannonian basin. There are many other important series in the Map Room between 1919 and 1945, including the WWII German edition 1:300,000 scale map series of Central Europe and Russia to the Ural Mts.; and a series of scale 1:100,000 for the territory of Poland and Russia between 1939-1940.

  18. Asphericity analysis using corneal wavefront and topographic meridional fits

    NASA Astrophysics Data System (ADS)

    Arba-Mosquera, Samuel; Merayo-Lloves, Jesús; de Ortueta, Diego

    2010-03-01

    The calculation of corneal asphericity as a 3-D fit renders more accurate results when it is based on the corneal wavefront aberrations rather than on the corneal topography of the principal meridians. A more accurate prediction could be obtained for hyperopic treatments compared to myopic treatments. We evaluate a method to calculate corneal asphericity and asphericity changes after refractive surgery. Sixty eyes of 15 consecutive myopic patients and 15 consecutive hyperopic patients (n=30 each) are retrospectively evaluated. Preoperative and 3-month-postoperative topographic and corneal wavefront analyses are performed using corneal topography. Ablations are performed using a laser with an aberration-free profile. Topographic changes in asphericity and corneal aberrations are evaluated for a 6-mm corneal diameter. The induction of corneal spherical aberrations and asphericity changes correlates with the achieved defocus correction. Preoperatively as well as postoperatively, asphericity calculated from the topography meridians correlates with asphericity calculated from the corneal wavefront in myopic and hyperopic treatments. A stronger correlation between postoperative asphericity and the ideally expected/predicted asphericity is obtained based on aberration-free assumptions calculated from corneal wavefront values rather than from the meridians. In hyperopic treatments, a better correlation can be obtained compared to the correlation in myopic treatments. Corneal asphericity calculated from corneal wavefront aberrations represents a 3-D fit of the corneal surface; asphericity calculated from the main topographic meridians represents a 2-D fit of the principal corneal meridians. Postoperative corneal asphericity can be calculated from corneal wavefront aberrations with higher fidelity than from corneal topography of the principal meridians. Hyperopic treatments show a greater accuracy than myopic treatments.

  19. High resolution survey for topographic surveying

    NASA Astrophysics Data System (ADS)

    Luh, L. C.; Setan, H.; Majid, Z.; Chong, A. K.; Tan, Z.

    2014-02-01

    In this decade, terrestrial laser scanner (TLS) is getting popular in many fields such as reconstruction, monitoring, surveying, as-built of facilities, archaeology, and topographic surveying. This is due the high speed in data collection which is about 50,000 to 1,000,000 three-dimensional (3D) points per second at high accuracy. The main advantage of 3D representation for the data is that it is more approximate to the real world. Therefore, the aim of this paper is to show the use of High-Definition Surveying (HDS), also known as 3D laser scanning for topographic survey. This research investigates the effectiveness of using terrestrial laser scanning system for topographic survey by carrying out field test in Universiti Teknologi Malaysia (UTM), Skudai, Johor. The 3D laser scanner used in this study is a Leica ScanStation C10. Data acquisition was carried out by applying the traversing method. In this study, the result for the topographic survey is under 1st class survey. At the completion of this study, a standard of procedure was proposed for topographic data acquisition using laser scanning systems. This proposed procedure serves as a guideline for users who wish to utilize laser scanning system in topographic survey fully.

  20. Proposal for a study of computer mapping of terrain using multispectral data from ERTS-A for the Yellowstone National Park test site

    NASA Technical Reports Server (NTRS)

    Smedes, H. W. (Principal Investigator); Root, R. R.; Roller, N. E. G.; Despain, D.

    1978-01-01

    The author has identified the following significant results. A terrain map of Yellowstone National Park showed plant community types and other classes of ground cover in what is basically a wild land. The map comprised 12 classes, six of which were mapped with accuracies of 70 to 95%. The remaining six classes had spectral reflectances that overlapped appreciably, and hence, those were mapped less accurately. Techniques were devised for quantitatively comparing the recognition map of the park with control data acquired from ground inspection and from analysis of sidelooking radar images, a thermal IR mosaic, and IR aerial photos of several scales. Quantitative analyses were made in ten 40 sq km test areas. Comparison mechanics were performed by computer with the final results displayed on line printer output. Forested areas were mapped by computer using ERTS data for less than 1/4 the cost of the conventional forest mapping technique for topographic base maps.

  1. 75 FR 42680 - Proposed Information Collection; Topographic and Bathymetric Data Survey

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-07-22

    ... each dataset will be collected to give an accurate picture of data quality and give users of the... Bathymetric Data Survey AGENCY: National Oceanic and Atmospheric Administration (NOAA), Commerce. ACTION... from our customers on the location of topographic and ] bathymetric data that are publicly...

  2. Localized damage caused by topographic amplification during the 2010 M7.0 Haiti earthquake

    USGS Publications Warehouse

    Hough, S.E.; Altidor, J.R.; Anglade, D.; Given, D.; Janvier, M.G.; Maharrey, J.Z.; Meremonte, M.; Mildor, B.S.-L.; Prepetit, C.; Yong, A.

    2010-01-01

    Local geological conditions, including both near-surface sedimentary layers and topographic features, are known to significantly influence ground motions caused by earthquakes. Microzonation maps use local geological conditions to characterize seismic hazard, but commonly incorporate the effect of only sedimentary layers. Microzonation does not take into account local topography, because significant topographic amplification is assumed to be rare. Here we show that, although the extent of structural damage in the 2010 Haiti earthquake was primarily due to poor construction, topographic amplification contributed significantly to damage in the district of Petionville, south of central Port-au-Prince. A large number of substantial, relatively well-built structures situated along a foothill ridge in this district sustained serious damage or collapse. Using recordings of aftershocks, we calculate the ground motion response at two seismic stations along the topographic ridge and at two stations in the adjacent valley. Ground motions on the ridge are amplified relative to both sites in the valley and a hard-rock reference site, and thus cannot be explained by sediment-induced amplification. Instead, the amplitude and predominant frequencies of ground motion indicate the amplification of seismic waves by a narrow, steep ridge. We suggest that microzonation maps can potentially be significantly improved by incorporation of topographic effects. ?? 2010 Macmillan Publishers Limited. All rights reserved.

  3. SU-E-J-100: The Combination of Deformable Image Registration and Regions-Of-Interest Mapping Technique to Accomplish Accurate Dose Calculation On Cone Beam Computed Tomography for Esophageal Cancer

    SciTech Connect

    Huang, B-T; Lu, J-Y

    2015-06-15

    Purpose: We introduce a new method combined with the deformable image registration (DIR) and regions-of-interest mapping (ROIM) technique to accurately calculate dose on daily CBCT for esophageal cancer. Methods: Patients suffered from esophageal cancer were enrolled in the study. Prescription was set to 66 Gy/30 F and 54 Gy/30 F to the primary tumor (PTV66) and subclinical disease (PTV54) . Planning CT (pCT) were segmented into 8 substructures in terms of their differences in physical density, such as gross target volume (GTV), venae cava superior (SVC), aorta, heart, spinal cord, lung, muscle and bones. The pCT and its substructures were transferred to the MIM software to readout their mean HU values. Afterwards, a deformable planning CT to daily KV-CBCT image registration method was then utilized to acquire a new structure set on CBCT. The newly generated structures on CBCT were then transferred back to the treatment planning system (TPS) and its HU information were overridden manually with mean HU values obtained from pCT. Finally, the treatment plan was projected onto the CBCT images with the same beam arrangements and monitor units (MUs) to accomplish dose calculation. Planning target volume (PTV) and organs at risk (OARs) from both of the pCT and CBCT were compared to evaluate the dose calculation accuracy. Results: It was found that the dose distribution in the CBCT showed little differences compared to the pCT, regardless of whether PTV or OARs were concerned. Specifically, dose variation in GTV, PTV54, PTV66, SVC, lung and heart were within 0.1%. The maximum dose variation was presented in the spinal cord, which was up to 2.7% dose difference. Conclusion: The proposed method combined with DIR and ROIM technique to accurately calculate dose distribution on CBCT for esophageal cancer is feasible.

  4. Nanomechanical and topographical imaging of living cells by atomic force microscopy with colloidal probes

    SciTech Connect

    Puricelli, Luca; Galluzzi, Massimiliano; Schulte, Carsten; Podestà, Alessandro Milani, Paolo

    2015-03-15

    Atomic Force Microscopy (AFM) has a great potential as a tool to characterize mechanical and morphological properties of living cells; these properties have been shown to correlate with cells’ fate and patho-physiological state in view of the development of novel early-diagnostic strategies. Although several reports have described experimental and technical approaches for the characterization of cellular elasticity by means of AFM, a robust and commonly accepted methodology is still lacking. Here, we show that micrometric spherical probes (also known as colloidal probes) are well suited for performing a combined topographic and mechanical analysis of living cells, with spatial resolution suitable for a complete and accurate mapping of cell morphological and elastic properties, and superior reliability and accuracy in the mechanical measurements with respect to conventional and widely used sharp AFM tips. We address a number of issues concerning the nanomechanical analysis, including the applicability of contact mechanical models and the impact of a constrained contact geometry on the measured Young’s modulus (the finite-thickness effect). We have tested our protocol by imaging living PC12 and MDA-MB-231 cells, in order to demonstrate the importance of the correction of the finite-thickness effect and the change in Young’s modulus induced by the action of a cytoskeleton-targeting drug.

  5. The effect of atmospheric and topographic correction methods on land cover classification accuracy

    NASA Astrophysics Data System (ADS)

    Vanonckelen, Steven; Lhermitte, Stefaan; Van Rompaey, Anton

    2013-10-01

    Mapping of vegetation in mountain areas based on remote sensing is obstructed by atmospheric and topographic distortions. A variety of atmospheric and topographic correction methods has been proposed to minimize atmospheric and topographic effects and should in principle lead to a better land cover classification. Only a limited number of atmospheric and topographic combinations has been tested and the effect on class accuracy and on different illumination conditions is not yet researched extensively. The purpose of this study was to evaluate the effect of coupled correction methods on land cover classification accuracy. Therefore, all combinations of three atmospheric (no atmospheric correction, dark object subtraction and correction based on transmittance functions) and five topographic corrections (no topographic correction, band ratioing, cosine correction, pixel-based Minnaert and pixel-based C-correction) were applied on two acquisitions (2009 and 2010) of a Landsat image in the Romanian Carpathian mountains. The accuracies of the fifteen resulting land cover maps were evaluated statistically based on two validation sets: a random validation set and a validation subset containing pixels present in the difference area between the uncorrected classification and one of the fourteen corrected classifications. New insights into the differences in classification accuracy were obtained. First, results showed that all corrected images resulted in higher overall classification accuracies than the uncorrected images. The highest accuracy for the full validation set was achieved after combination of an atmospheric correction based on transmittance functions and a pixel-based Minnaert topographic correction. Secondly, class accuracies of especially the coniferous and mixed forest classes were enhanced after correction. There was only a minor improvement for the other land cover classes (broadleaved forest, bare soil, grass and water). This was explained by the position

  6. A Road Rally as a Topographic Map Exercise.

    ERIC Educational Resources Information Center

    Kirchner, James Gary; Searight, Thomas Kay

    1989-01-01

    Gives driving directions for a circuitous route while asking the drivers to make observations, measurements, interpretations and to locate features. Includes an example for the LaSalle Quadrangle, Illinois, which takes about one hour to complete. (Author/MVL)

  7. EEG Topographic Mapping of Visual and Kinesthetic Imagery in Swimmers.

    PubMed

    Wilson, V E; Dikman, Z; Bird, E I; Williams, J M; Harmison, R; Shaw-Thornton, L; Schwartz, G E

    2016-03-01

    This study investigated differences in QEEG measures between kinesthetic and visual imagery of a 100-m swim in 36 elite competitive swimmers. Background information and post-trial checks controlled for the modality of imagery, swimming skill level, preferred imagery style, intensity of image and task equality. Measures of EEG relative magnitude in theta, low (7-9 Hz) and high alpha (8-10 Hz), and low and high beta were taken from 19 scalp sites during baseline, visual, and kinesthetic imagery. QEEG magnitudes in the low alpha band during the visual and kinesthetic conditions were attenuated from baseline in low band alpha but no changes were seen in any other bands. Swimmers produced more low alpha EEG magnitude during visual versus kinesthetic imagery. This was interpreted as the swimmers having a greater efficiency at producing visual imagery. Participants who reported a strong intensity versus a weaker feeling of the image (kinesthetic) had less low alpha magnitude, i.e., there was use of more cortical resources, but not for the visual condition. These data suggest that low band (7-9 Hz) alpha distinguishes imagery modalities from baseline, visual imagery requires less cortical resources than kinesthetic imagery, and that intense feelings of swimming requires more brain activity than less intense feelings.

  8. Topographic Mapping of the Synaptic Cleft into Adhesive Nanodomains

    PubMed Central

    de Arce, Karen Perez; Schrod, Nikolas; Metzbower, Sarah W. R.; Allgeyer, Edward; Kong, Geoffrey K.-W.; Tang, Aihui; Krupp, Alexander J.; Stein, Valentin; Liu, Xinran; Bewersdorf, Jörg; Blanpied, Thomas A.; Lucic, Vladan; Biederer, Thomas

    2015-01-01

    SUMMARY The cleft is an integral part of synapses, yet its macromolecular organization remains unclear. We here show that the cleft of excitatory synapses exhibits a distinct density profile as measured by cryo-electron tomography (cryo-ET). Aiming for molecular insights, we analyzed the synapse-organizing proteins SynCAM 1 and EphB2. Cryo-ET of SynCAM 1 knock-out and overexpressor synapses showed that this immunoglobulin protein shapes the cleft’s edge. In agreement, SynCAM 1 delineates the postsynaptic perimeter as determined by immuno-electron microscopy (EM) and superresolution imaging. In contrast, the EphB2 receptor tyrosine kinase is enriched deeper within the postsynaptic area. Unexpectedly, SynCAM 1 can form ensembles proximal to postsynaptic densities, and synapses containing these ensembles were larger. Postsynaptic SynCAM 1 surface puncta were not static but became enlarged after a long-term depression paradigm. These results support that the synaptic cleft is organized on a nanoscale into sub-compartments marked by distinct trans-synaptic complexes. PMID:26687224

  9. Mapping of hazard from rainfall-triggered landslides in developing countries: Examples from Honduras and Micronesia

    USGS Publications Warehouse

    Harp, E.L.; Reid, M.E.; McKenna, J.P.; Michael, J.A.

    2009-01-01

    Loss of life and property caused by landslides triggered by extreme rainfall events demonstrates the need for landslide-hazard assessment in developing countries where recovery from such events often exceeds the country's resources. Mapping landslide hazards in developing countries where the need for landslide-hazard mitigation is great but the resources are few is a challenging, but not intractable problem. The minimum requirements for constructing a physically based landslide-hazard map from a landslide-triggering storm, using the simple methods we discuss, are: (1) an accurate mapped landslide inventory, (2) a slope map derived from a digital elevation model (DEM) or topographic map, and (3) material strength properties of the slopes involved. Provided that the landslide distribution from a triggering event can be documented and mapped, it is often possible to glean enough topographic and geologic information from existing databases to produce a reliable map that depicts landslide hazards from an extreme event. Most areas of the world have enough topographic information to provide digital elevation models from which to construct slope maps. In the likely event that engineering properties of slope materials are not available, reasonable estimates can be made with detailed field examination by engineering geologists or geotechnical engineers. Resulting landslide hazard maps can be used as tools to guide relocation and redevelopment, or, more likely, temporary relocation efforts during severe storm events such as hurricanes/typhoons to minimize loss of life and property. We illustrate these methods in two case studies of lethal landslides in developing countries: Tegucigalpa, Honduras (during Hurricane Mitch in 1998) and the Chuuk Islands, Micronesia (during Typhoon Chata'an in 2002).

  10. Mapping Alpine Vegetation Location Properties by Dense Matching

    NASA Astrophysics Data System (ADS)

    Niederheiser, Robert; Rutzinger, Martin; Lamprecht, Andrea; Steinbauer, Klaus; Winkler, Manuela; Pauli, Harald

    2016-06-01

    Highly accurate 3D micro topographic mapping in mountain research demands for light equipment and low cost solutions. Recent developments in structure from motion and dense matching techniques provide promising tools for such applications. In the following, the feasibility of terrestrial photogrammetry for mapping topographic location properties of sparsely vegetated areas in selected European mountain regions is investigated. Changes in species composition at alpine vegetation locations are indicators of climate change consequences, such as the pronounced rise of average temperatures in mountains compared to the global average. Better understanding of climate change effects on plants demand for investigations on a micro-topographic scale. We use professional and consumer grade digital single-lens reflex cameras mapping 288 plots each 3 x 3 m on 18 summits in the Alps and Mediterranean Mountains within the GLORIA (GLobal Observation Research Initiative in Alpine environments) network. Image matching tests result in accuracies that are in the order of millimetres in the XY-plane and below 0.5 mm in Z-direction at the second image pyramid level. Reconstructing vegetation proves to be a challenge due to its fine and small structured architecture and its permanent movement by wind during image acquisition, which is omnipresent on mountain summits. The produced 3D point clouds are gridded to 6 mm resolution from which topographic parameters such as slope, aspect and roughness are derived. At a later project stage these parameters will be statistically linked to botanical reference data in order to conclude on relations between specific location properties and species compositions.

  11. 3-Dimensional Topographic Models for the Classroom

    NASA Technical Reports Server (NTRS)

    Keller, J. W.; Roark, J. H.; Sakimoto, S. E. H.; Stockman, S.; Frey, H. V.

    2003-01-01

    We have recently undertaken a program to develop educational tools using 3-dimensional solid models of digital elevation data acquired by the Mars Orbital Laser Altimeter (MOLA) for Mars as well as a variety of sources for elevation data of the Earth. This work is made possible by the use of rapid prototyping technology to construct solid 3-Dimensional models of science data. We recently acquired rapid prototyping machine that builds 3-dimensional models in extruded plastic. While the machine was acquired to assist in the design and development of scientific instruments and hardware, it is also fully capable of producing models of spacecraft remote sensing data. We have demonstrated this by using Mars Orbiter Laser Altimeter (MOLA) topographic data and Earth based topographic data to produce extruded plastic topographic models which are visually appealing and instantly engage those who handle them.

  12. USGS US topo maps for Alaska

    USGS Publications Warehouse

    Anderson, Becci; Fuller, Tracy

    2014-01-01

    In July 2013, the USGS National Geospatial Program began producing new topographic maps for Alaska, providing a new map series for the state known as US Topo. Prior to the start of US Topo map production in Alaska, the most detailed statewide USGS topographic maps were 15-minute 1:63,360-scale maps, with their original production often dating back nearly fifty years. The new 7.5-minute digital maps are created at 1:25,000 map scale, and show greatly increased topographic detail when compared to the older maps. The map scale and data specifications were selected based on significant outreach to various map user groups in Alaska. This multi-year mapping initiative will vastly enhance the base topographic maps for Alaska and is possible because of improvements to key digital map datasets in the state. The new maps and data are beneficial in high priority applications such as safety, planning, research and resource management. New mapping will support science applications throughout the state and provide updated maps for parks, recreation lands and villages.

  13. Updating National Topographic Data Base Using Change Detection Methods

    NASA Astrophysics Data System (ADS)

    Keinan, E.; Felus, Y. A.; Tal, Y.; Zilberstien, O.; Elihai, Y.

    2016-06-01

    The traditional method for updating a topographic database on a national scale is a complex process that requires human resources, time and the development of specialized procedures. In many National Mapping and Cadaster Agencies (NMCA), the updating cycle takes a few years. Today, the reality is dynamic and the changes occur every day, therefore, the users expect that the existing database will portray the current reality. Global mapping projects which are based on community volunteers, such as OSM, update their database every day based on crowdsourcing. In order to fulfil user's requirements for rapid updating, a new methodology that maps major interest areas while preserving associated decoding information, should be developed. Until recently, automated processes did not yield satisfactory results, and a typically process included comparing images from different periods. The success rates in identifying the objects were low, and most were accompanied by a high percentage of false alarms. As a result, the automatic process required significant editorial work that made it uneconomical. In the recent years, the development of technologies in mapping, advancement in image processing algorithms and computer vision, together with the development of digital aerial cameras with NIR band and Very High Resolution satellites, allow the implementation of a cost effective automated process. The automatic process is based on high-resolution Digital Surface Model analysis, Multi Spectral (MS) classification, MS segmentation, object analysis and shape forming algorithms. This article reviews the results of a novel change detection methodology as a first step for updating NTDB in the Survey of Israel.

  14. Topographic Controls on Landslide and Debris-Flow Mobility

    NASA Astrophysics Data System (ADS)

    McCoy, S. W.; Pettitt, S.

    2014-12-01

    Regardless of whether a granular flow initiates from failure and liquefaction of a shallow landslide or from overland flow that entrains sediment to form a debris flow, the resulting flow poses hazards to downslope communities. Understanding controls on granular-flow mobility is critical for accurate hazard prediction. The topographic form of granular-flow paths can vary significantly across different steeplands and is one of the few flow-path properties that can be readily altered by engineered control structures such as closed-type check dams. We use grain-scale numerical modeling (discrete element method simulations) of free-surface, gravity-driven granular flows to investigate how different topographic profiles with the same mean slope and total relief can produce notable differences in flow mobility due to strong nonlinearities inherent to granular-flow dynamics. We describe how varying the profile shape from planar, to convex up, to concave up, as well how varying the number, size, and location of check dams along a flow path, changes flow velocity, thickness, discharge, energy dissipation, impact force and runout distance. Our preliminary results highlight an important path dependence for this nonlinear system, show that caution should be used when predicting flow dynamics from path-averaged properties, and provide some mechanics-based guidance for engineering control structures.

  15. Topographic organization of the cerebral cortex and brain cartography.

    PubMed

    Eickhoff, Simon B; Constable, R Todd; Yeo, B T Thomas

    2017-02-20

    One of the most specific but also challenging properties of the brain is its topographic organization into distinct modules or cortical areas. In this paper, we first review the concept of topographic organization and its historical development. Next, we provide a critical discussion of the current definition of what constitutes a cortical area, why the concept has been so central to the field of neuroimaging and the challenges that arise from this view. A key aspect in this discussion is the issue of spatial scale and hierarchy in the brain. Focusing on in-vivo brain parcellation as a rapidly expanding field of research, we highlight potential limitations of the classical concept of cortical areas in the context of multi-modal parcellation and propose a revised interpretation of cortical areas building on the concept of neurobiological atoms that may be aggregated into larger units within and across modalities. We conclude by presenting an outlook on the implication of this revised concept for future mapping studies and raise some open questions in the context of brain parcellation.

  16. MGS Mars Orbiter Laser Altimeter Topographic Profile of Impact Crater

    NASA Technical Reports Server (NTRS)

    1997-01-01

    Among the myriad of interesting landforms sampled by MOLA on its first traverse across the Red Planet on 15 September 1997 is this 13-mile (21-kilometer) diameter impact crater located at 48oN. The figure shows the topography, the computed position of the spacecraft groundtrack (solid line) and the track adjusted to correct for image location error (dashed line). The topographic profile provides some of the first indications of how landscape modification has operated in Martian geologic history. The relief of the crater rim, in combination with the steepness (over 20o) of the inner crater wall, are intriguing in that most craters of this size are much more subdued. The shape of the outer ejecta blanket of the crater likely indicates impact into an H2O rich crust. Issues concerning how craters such as this can be used to understand the properties of the uppermost crust of Mars in regions where the role of water and other volatiles may be important can be addressed with the high spatial and vertical resolution topographic profiles that will be acquired by MOLA once it starts its detailed mapping of the Red Planet in March of 1998.

  17. Development of a seamless multisource topographic/bathymetric elevation model of Tampa Bay

    USGS Publications Warehouse

    Gesch, D.; Wilson, R.

    2001-01-01

    Many applications of geospatial data in coastal environments require knowledge of the nearshore topography and bathymetry. However, because existing topographic and bathymetric data have been collected independently for different purposes, it has been difficult to use them together at the land/water interface owing to differences in format, projection, resolution, accuracy, and datums. As a first step toward solving the problems of integrating diverse coastal datasets, the U.S. Geological Survey (USGS) and the National Oceanic and Atmospheric Administration (NOAA) are collaborating on a joint demonstration project to merge their data for the Tampa Bay region of Florida. The best available topographic and bathymetric data were extracted from the USGS National Elevation Dataset and the NOAA hydrographic survey database, respectively. Before being merged, the topographic and bathymetric datasets were processed with standard geographic information system tools to place them in a common horizontal reference frame. Also, a key part of the preprocessing was transformation to a common vertical reference through the use of VDatum, a new tool created by NOAA's National Geodetic Survey for vertical datum conversions. The final merged product is a seamless topographic/bathymetric model covering the Tampa Bay region at a grid spacing of 1 arc-second. Topographic LIDAR data were processed and merged with the bathymetry to demonstrate the incorporation of recent third party data sources for several test areas. A primary application of a merged topographic/bathymetric elevation model is for user-defined shoreline delineation, in which the user decides on the tidal condition (for example, low or high water) to be superimposed on the elevation data to determine the spatial position of the water line. Such a use of merged topographic/bathymetric data could lead to the development of a shoreline zone, which could reduce redundant mapping efforts by federal, state, and local agencies

  18. Topographical effects of climate dataset and their impacts on the estimation of regional net primary productivity

    NASA Astrophysics Data System (ADS)

    Sun, L. Qing; Feng, Feng X.

    2014-11-01

    In this study, we first built and compared two different climate datasets for Wuling mountainous area in 2010, one of which considered topographical effects during the ANUSPLIN interpolation was referred as terrain-based climate dataset, while the other one did not was called ordinary climate dataset. Then, we quantified the topographical effects of climatic inputs on NPP estimation by inputting two different climate datasets to the same ecosystem model, the Boreal Ecosystem Productivity Simulator (BEPS), to evaluate the importance of considering relief when estimating NPP. Finally, we found the primary contributing variables to the topographical effects through a series of experiments given an overall accuracy of the model output for NPP. The results showed that: (1) The terrain-based climate dataset presented more reliable topographic information and had closer agreements with the station dataset than the ordinary climate dataset at successive time series of 365 days in terms of the daily mean values. (2) On average, ordinary climate dataset underestimated NPP by 12.5% compared with terrain-based climate dataset over the whole study area. (3) The primary climate variables contributing to the topographical effects of climatic inputs for Wuling mountainous area were temperatures, which suggest that it is necessary to correct temperature differences for estimating NPP accurately in such a complex terrain.

  19. High-resolution global topographic index values for use in large-scale hydrological modelling

    NASA Astrophysics Data System (ADS)

    Marthews, Toby; Dadson, Simon; Lehner, Bernhard; Abele, Simon; Gedney, Nicola

    2015-04-01

    Modelling land surface water flow is of critical importance for simulating land-surface fluxes, predicting runoff and water table dynamics and for many other applications of Land Surface Models. Many approaches are based on the popular hydrology model TOPMODEL, and the most important parameter of this model is the well-known topographic index. Here we present new, high-resolution parameter maps of the topographic index for all ice-free land pixels calculated from hydrologically-conditioned HydroSHEDS data using the GA2 algorithm ('GRIDATB 2'). At 15 arc-sec resolution, these layers are four times finer than the resolution of the previously best-available topographic index layers, the Compound Topographic Index of HYDRO1k (CTI). For the largest river catchments occurring on each continent we found that, in comparison with CTI our revised values were up to 20% lower in, e.g., the Amazon. We found the highest catchment means were for the Murray-Darling and Nelson-Saskatchewan rather than for the Amazon and St. Lawrence as found from the CTI. For the majority of large catchments, however, the spread of our new GA2 index values is very similar to those of CTI, yet with more spatial variability apparent at fine scale. We believe these new index layers represent greatly-improved global-scale topographic index values and hope that they will be widely used in land surface modelling applications in the future.

  20. A review of topographic controls on moraine distribution

    NASA Astrophysics Data System (ADS)

    Barr, Iestyn D.; Lovell, Harold

    2014-12-01

    Ice-marginal moraines are often used to reconstruct the dimensions of former ice masses, which are then used as proxies for palaeoclimate. This approach relies on the assumption that the distribution of moraines in the modern landscape is an accurate reflection of former ice margin positions during climatically controlled periods of ice margin stability. However, the validity of this assumption is open to question, as a number of additional, nonclimatic factors are known to influence moraine distribution. This review considers the role played by topography in this process, with specific focus on moraine formation, preservation, and ease of identification (topoclimatic controls are not considered). Published literature indicates that the importance of topography in regulating moraine distribution varies spatially, temporally, and as a function of the ice mass type responsible for moraine deposition. In particular, in the case of ice sheets and ice caps (> 1000 km2), one potentially important topographic control on where in a landscape moraines are deposited is erosional feedback, whereby subglacial erosion causes ice masses to become less extensive over successive glacial cycles. For the marine-terminating outlets of such ice masses, fjord geometry also exerts a strong control on where moraines are deposited, promoting their deposition in proximity to valley narrowings, bends, bifurcations, where basins are shallow, and/or in the vicinity of topographic bumps. Moraines formed at the margins of ice sheets and ice caps are likely to be large and readily identifiable in the modern landscape. In the case of icefields and valley glaciers (10-1000 km2), erosional feedback may well play some role in regulating where moraines are deposited, but other factors, including variations in accumulation area topography and the propensity for moraines to form at topographic pinning points, are also likely to be important. This is particularly relevant where land-terminating glaciers

  1. Using High Resolution Balloon Photography to Provide Topographic Data

    NASA Astrophysics Data System (ADS)

    Russell, K.; Bauer, T.

    2009-12-01

    For site-scale projects, the Bureau of Reclamation has used low altitude balloon photogrammetry to obtain high-resolution photographs and detailed topographic information. These data are collected in a fraction of the time and effort it would take to obtain a similar level of detail using traditional methods. This is accomplished at a significantly reduced cost compared to flying LiDAR or aerial photography, which can be prohibitively expensive for small or medium scale projects. Low altitude balloon photogrammetry is a process where overlapping photographs and ground survey control points are input into a photogrammetry software program (AdamTechnology 3DM Analyst Mine Mapping Suite) to produce orthophotographs and digital terrain model (DTM) elevation points. To acquire the photos a digital camera is attached to an 8-foot diameter helium balloon. The balloon is tethered and flown above the location of interest. The camera is controlled remotely while a live image is transmitted to a receiver on the ground. Ground survey control is established by using GPS equipment to survey ground targets placed within the area to be photographed. There are limitations to the process. Data collection is very weather dependent; too much wind causes the balloon to be unstable. Site conditions also determine the feasibility: power lines, trees, and steep embankments can cause difficulties maneuvering the balloon. Although some of the photographs show the underwater portion of the channel; there is little agreement between GPS points and the processed DTM elevations in the channel. The balloon has been used to survey large woody debris (LWD) structures and channel morphology in the Middle Fork John Day River (central Oregon) and monitoring debris after the removal of Chiloquin Dam (Sprague River, southern Oregon). Seventeen LWD structures were installed on the Middle Fork John Day River near John Day, OR in 2007 and 2008 to provide aquatic habitat. Balloon photos were obtained in

  2. Topographic site effects: numerical studies and a possible application to the regional Newmark approach

    NASA Astrophysics Data System (ADS)

    Torgoev, Almaz; Havenith, Hans-Balder

    2015-04-01

    2D elasto-dynamic modelling of the seismic response was performed with the UDEC software (ver. 4.01, ITASCA). The numerical studies have been performed for six models constructed from real topographic settings of the landslide-prone slopes situated in the Mailuu-Suu River Valley, Southern Kyrgyzstan. The main focus of our studies was the development of proxies for a regional mapping of topographic site effects. The main parameter we studied was the Arias Intensity (Ia). This parameter is applied to the GIS-based Newmark method, which regionally maps the seismically-induced landslide susceptibility. This method performs a mapping of the Ia values via empirical attenuation laws, which mainly account for the regional geometric spreading. An input of site effects is generally not included in these laws. While total site effects normally integrate both geologic and topographic inputs, our paper focuses only on the pure topographic effects. The numerical studies showed that the amplification of the Arias Intensity depends on two main factors: the frequency content of the input signal and the site settings. The first parameter can be predicted for wide areas through attenuation laws. With respect to the impact of site settings on Ia amplification, our studies show that convex surface morphologies with a longer baseline induce amplification in the low frequency domain, while those with a shorter baseline amplify the seismic shaking in the higher frequency domain. The link between topographic site amplification and the size of a surface morphology is identified. Those developed proxies are adapted for application in conventional GIS software platforms.

  3. Topographical map series in the Map Room of Institute and Museum of Military History in Budapest, Hungary between 1919-1945: Larger scales series (1:25,000, 1:50,000, 1:75,000) in the changing territory of Hungary

    NASA Astrophysics Data System (ADS)

    Jankó, A.; Bánfi, R.

    2009-04-01

    The first independent Hungarian cartographical organization, the Hungarian Military Mapping Group (Magyar Katonai Térképező Csoport), came into being in 1919, the next organization to be established was the Royal Hungarian State Mapping Institute (Magyar Királyi Állami Térképészet) in 1922 (Institute of Military Cartography [Honvéd Térképészeti Intézet] after 1938). These authorities kept the scaling and the scale 1:25,000 sheets of the third military survey of the Austro-Hungarian Monarchy between 1869 and 1887, but its data must have been refreshed; therefore local correction (re-ambulation) and later, in 1927, a new survey were conducted. Further local corrections were initiated by 1939-1940 of the sheets of the southern and eastern borders. As a result of the revisions less than fifty per cent of Hungary's territory became surveyed. The supervised sheets were circulated in multi-colour versions while those not refreshed were issued as reprints of the third military survey in black and white editions. The results of the supervisions were transferred onto the scale 1:75,000 maps as well. During the World War II (1940-1945) in the scale 1:50,000 403 sheets were produced of Hungary (together with territories reattached to the country between 1938-1941.

  4. USGS standard quadrangle maps for emergency response

    USGS Publications Warehouse

    Moore, Laurence R.

    2009-01-01

    The 1:24,000-scale topographic quadrangle was the primary product of the U.S. Geological Survey's (USGS) National Mapping Program from 1947-1992. This map series includes about 54,000 map sheets for the conterminous United States, and is the only uniform map series ever produced that covers this area at such a large scale. This map series partially was revised under several programs, starting as early as 1968, but these programs were not adequate to keep the series current. Through the 1990s the emphasis of the USGS mapping program shifted away from topographic maps and toward more specialized digital data products. Topographic map revision dropped off rapidly after 1999, and stopped completely by 2004. Since 2001, emergency-response and homeland security requirement have revived the question of whether a standard national topographic series is needed. Emergencies such as Hurricane Katrina in 2005 and California wildfires in 2007-08 demonstrated that familiar maps are important to first responders. Maps that have a standard scale, extent, and grids help reduce confusion and save time in emergencies. Traditional maps are designed to allow the human brain to quickly process large amounts of information, and depend on artistic layout and design that cannot be fully automated. In spite of technical advances, creating a traditional, general-purpose topographic map is still expensive. Although the content and layout of traditional topographic maps probably is still desirable, the preferred packaging and delivery of maps has changed. Digital image files are now desired by most users, but to be useful to the emergency-response community, these files must be easy to view and easy to print without specialized geographic information system expertise or software.

  5. TOPOGRAPHIC SITE RESPONSE AT HARD ROCK SITES

    NASA Astrophysics Data System (ADS)

    Yong, A. K.; Hough, S. E.

    2009-12-01

    Site (material impedance) and topographic (geometric form) effects are known to be key factors that influence seismic ground motions. To characterize site effects, Yong et al. (2009) developed a terrain-based Vs30 prediction model using an automated classification method (Iwahashi and Pike, 2007) that relied on taxonomic criteria (slope gradient, local convexity and surface texture) developed from geomorphometry to identify 16 terrain types from a 1-km spatial resolution (SRTM30 data) digital elevation model of California. On the basis that the underlying framework for this model contains parameters (esp., local convexity) which aptly describe the geometry (i.e., base to height ratio) of relief features that are known to also control the behavior of ground motions (Bouchon, 1973), we extend our investigation to study topographic effects. Focusing on sites that would generally be considered “hard rock,” the classification scheme distinguishes 7 separate terrain types ranging from “moderately eroded mountains” to “well dissected alpine summits.” Observed 1-Hz amplification factors at Southern California Seismographic Network sites reveal a weak but systematic correlation with these 7 terrain types. Significant scatter is also found within each terrain type; typical standard deviations of logarithmic amplification factors are 0.2-0.3. Considering stations that have high amplification factors, we find some that have apparently been misclassified due to data resolution limitations. Many of the remaining stations with higher than expected amplifications are located on or near topographic peaks or ridges. The unusually high amplification factors at hard-rock sites, typically factors of 1.5-2, can most plausibly be explained as a topographic effect.

  6. marmap: A package for importing, plotting and analyzing bathymetric and topographic data in R.

    PubMed

    Pante, Eric; Simon-Bouhet, Benoit

    2013-01-01

    In this communication we introduce marmap, a package designed for downloading, plotting and manipulating bathymetric and topographic data in R. marmap can query the ETOPO1 bathymetry and topography database hosted by the NOAA, use simple latitude-longitude-depth data in ascii format, and take advantage of the advanced plotting tools available in R to build publication-quality bathymetric maps. Functions to query data (bathymetry, sampling information…) are available interactively by clicking on marmap maps. Bathymetric and topographic data can also be used to calculate projected surface areas within specified depth/altitude intervals, and constrain the calculation of realistic shortest path distances. Such information can be used in molecular ecology, for example, to evaluate genetic isolation by distance in a spatially-explicit framework.

  7. Identifying potential habitat for the endangered Aleutian shield fern using topographical characteristics

    USGS Publications Warehouse

    Duarte, Adam; Wolcott, Daniel M.; Chow, T. Edwin

    2012-01-01

    The Aleutian shield fern Polystichum aleuticum is endemic to the Aleutian archipelago of Alaska and is listed as endangered pursuant to the U.S. Endangered Species Act. Despite numerous efforts to discover new populations of this species, only four known populations are documented to date, and information is needed to prioritize locations for future surveys. Therefore, we incorporated topographical habitat characteristics (elevation, slope, aspect, distance from coastline, and anthropogenic footprint) found at known Aleutian shield fern locations into a Geographical Information System (GIS) model to create a habitat suitability map for the entirety of the Andreaonof Islands. A total of 18 islands contained 489.26 km2 of highly suitable and moderately suitable habitat when weighting each factor equally. This study reports a habitat suitability map for the endangered Aleutian shield fern using topographical characteristics, which can be used to assist current and future recovery efforts for the species.

  8. The U.S. Geological Survey mapping and cartographic database activities, 2006-2010

    USGS Publications Warehouse

    Craun, Kari J.; Donnelly, John P.; Allord, Gregory J.

    2011-01-01

    The U.S. Geological Survey (USGS) began systematic topographic mapping of the United States in the 1880s, beginning with scales of 1:250,000 and 1:125,000 in support of geological mapping. Responding to the need for higher resolution and more detail, the 1:62,500-scale, 15-minute, topographic map series was begun in the beginning of the 20th century. Finally, in the 1950s the USGS adopted the 1:24,000-scale, 7.5-minute topographic map series to portray even more detail, completing the coverage of the conterminous 48 states of the United States with this series in 1992. In 2001, the USGS developed the vision and concept of The National Map, a topographic database for the 21st century and the source for a new generation of topographic maps (http://nationalmap.gov/). In 2008, the initial production of those maps began with a 1:24,000-scale digital product. In a separate, but related project, the USGS began scanning the existing inventory of historical topographic maps at all scales to accompany the new topographic maps. The USGS also had developed a digital database of The National Atlas of the United States. The digital version of Atlas is now Web-available and supports a mapping engine for small scale maps of the United States and North America. These three efforts define topographic mapping activities of the USGS during the last few years and are discussed below.

  9. Topographic relationships for design rainfalls over Australia

    NASA Astrophysics Data System (ADS)

    Johnson, F.; Hutchinson, M. F.; The, C.; Beesley, C.; Green, J.

    2016-02-01

    Design rainfall statistics are the primary inputs used to assess flood risk across river catchments. These statistics normally take the form of Intensity-Duration-Frequency (IDF) curves that are derived from extreme value probability distributions fitted to observed daily, and sub-daily, rainfall data. The design rainfall relationships are often required for catchments where there are limited rainfall records, particularly catchments in remote areas with high topographic relief and hence some form of interpolation is required to provide estimates in these areas. This paper assesses the topographic dependence of rainfall extremes by using elevation-dependent thin plate smoothing splines to interpolate the mean annual maximum rainfall, for periods from one to seven days, across Australia. The analyses confirm the important impact of topography in explaining the spatial patterns of these extreme rainfall statistics. Continent-wide residual and cross validation statistics are used to demonstrate the 100-fold impact of elevation in relation to horizontal coordinates in explaining the spatial patterns, consistent with previous rainfall scaling studies and observational evidence. The impact of the complexity of the fitted spline surfaces, as defined by the number of knots, and the impact of applying variance stabilising transformations to the data, were also assessed. It was found that a relatively large number of 3570 knots, suitably chosen from 8619 gauge locations, was required to minimise the summary error statistics. Square root and log data transformations were found to deliver marginally superior continent-wide cross validation statistics, in comparison to applying no data transformation, but detailed assessments of residuals in complex high rainfall regions with high topographic relief showed that no data transformation gave superior performance in these regions. These results are consistent with the understanding that in areas with modest topographic relief, as

  10. Ephrin-A5 overexpression degrades topographic specificity in the mouse gluteus maximus muscle.

    PubMed

    Lampa, S J; Potluri, S; Norton, A S; Fusco, W; Laskowski, M B

    2004-11-25

    Motor neurons project onto specific muscles with a distinct positional bias. We have previously shown using electrophysiological techniques that overexpression of ephrin-A5 degrades this topographic map. Here, we show that positional differences in axon terminal areas, an entirely different parameter of neuromuscular topography, are also eliminated with ephrin-A5 overexpression. Therefore, we now have both morphological and electrophysiological approaches to explore the mechanisms of neuromuscular topography.

  11. Variability of land degradation along topographic transects in two Mediterranean areas

    NASA Astrophysics Data System (ADS)

    Kotb Abd-Elmabod, Sameh; Anaya-Romero, María; Phillips, Jonathan D.; Jordán, Antonio; Muñoz-Rojas, Miriam; de la Rosa, Diego

    2013-04-01

    This study aims to investigate the influence of topography, soil factors and climate conditions on land degradation along topographic transects in two Mediterranean areas: Seville (southern Spain) and El-Fayoum (northern Egypt). Elevation and slope gradient information from both study sites were obtained from Shuttle Radar Topography Mission (SRTM) data, processed using ENVI 4.7. Additionally, topographic transects were developed using ArcGIS 10 software. To represent the highest variability in elevation, lithology, soil and land use in each site, one representative topographic transect from El-Fayoum and two topographic transects from Seville were selected. Soil characteristics along each of the topographic transect were obtained by mapping land surveying and laboratory analyses data. MicroLEIS DSS (Pantanal and Raizal submodels) was used to assess soil contamination with phosphorus, nitrogen, heavy metals and pesticides and water erosion vulnerability along the topographic transects for each study site using soil data, including depth, texture, drainage, carbonate content, salinity, sodium saturation, organic matter content and acidity (pH). Additionally, monthly average values of climate variables (mean temperature, maximum and minimum rainfall and number of rainy days) have been used. The results obtained by Raizal and Pantanal models suggest that lower elevation areas from transects show low vulnerability classes in both degradation processes (water erosion and soil contamination), when compared to uplands. The variation of climate conditions and soil factors along the Seville and El-Fayoum transects were responsible for the observed variability in both soil degradation processes (erosion and contamination). Key words: MicroLEIS DSS, soil degradation, soil factors, topography, DEM

  12. A geostatistical approach to mapping site response spectral amplifications

    USGS Publications Warehouse

    Thompson, E.M.; Baise, L.G.; Kayen, R.E.; Tanaka, Y.; Tanaka, H.

    2010-01-01

    If quantitative estimates of the seismic properties do not exist at a location of interest then the site response spectral amplifications must be estimated from data collected at other locations. Currently, the most common approach employs correlations of site class with maps of surficial geology. Analogously, correlations of site class with topographic slope can be employed where the surficial geology is unknown. Our goal is to identify and validate a method to estimate site response with greater spatial resolution and accuracy for regions where additional effort is warranted. This method consists of three components: region-specific data collection, a spatial model for interpolating seismic properties, and a theoretical method for computing spectral amplifications from the interpolated seismic properties. We consider three spatial interpolation schemes: correlations with surficial geology, termed the geologic trend (GT), ordinary kriging (OK), and kriging with a trend (KT). We estimate the spectral amplifications from seismic properties using the square root of impedance method, thereby linking the frequency-dependent spectral amplifications to the depth-dependent seismic properties. Thus, the range of periods for which this method is applicable is limited by the depth of exploration. A dense survey of near-surface S-wave slowness (Ss) throughout Kobe, Japan shows that the geostatistical methods give more accurate estimates of Ss than the topographic slope and GT methods, and the OK and KT methods perform equally well. We prefer the KT model because it can be seamlessly integrated with geologic maps that cover larger regions. Empirical spectral amplifications show that the region-specific data achieve more accurate estimates of observed median short-period amplifications than the topographic slope method. ?? 2010 Elsevier B.V.

  13. Development of Waterfall Cliff Face: An Implication from Multitemporal High-definition Topographic Data

    NASA Astrophysics Data System (ADS)

    Hayakawa, Y. S.; Obanawa, H.

    2015-12-01

    Bedrock knickpoints (waterfalls) often act as erosional front in bedrock rivers, whose geomorphological processes are various. In waterfalls with vertical cliffs, both fluvial erosion and mass movement are feasible to form the landscape. Although morphological changes of such steep cliffs are sometimes visually observed, quantitative and precise measurements of their spatiotemporal distribution have been limited due to poor accessibility to such cliffs. For the clarification of geomorphological processes in such cliffs, multi-temporal mapping of the cliff face at a high resolution can be advantaged by short-range remote sensing approaches. Here we carry out multi-temporal terrestrial laser scanning (TLS), as well as structure-from-motion multi-view stereo (SfM-MVS) photogrammetry based on unmanned aerial system (UAS) for accurate topographic mapping of cliffs around a waterfall. The study site is Kegon Falls in central Japan, having a vertical drop of surface water from top of its overhanging cliff and groundwater outflows from its lower portions. The bedrock consists of alternate layers of jointed andesite lava and conglomerates. The latest major rockfall in 1986 caused approximately 8-m recession of the waterfall lip. Three-dimensional changes of the rock surface were detected by multi-temporal measurements by TLS over years, showing the portions of small rockfalls and surface lowering in the bedrock. Erosion was frequently observed in relatively weak the conglomerates layer, whereas small rockfalls were often found in the andesite layers. Wider areas of the waterfall and cliff were also measured by UAS-based SfM-MVS photogrammetry, improving the mapping quality of the cliff morphology. Point clouds are also projected on a vertical plane to generate a digital elevation model (DEM), and cross-sectional profiles extracted from the DEM indicate the presence of a distinct, 5-10-m deep depression in the cliff face. This appears to have been formed by freeze-thaw and

  14. CONMAP - USGS MARINE MAPPING PROGRAM.

    USGS Publications Warehouse

    Escowitz, Edward C.

    1985-01-01

    The U. S. Geological Survey has commenced a marine mapping program, CONMAP (the Continental Margin Maps), which is supported by, and dependent on, a foundation of digital data-bases. The goal of the program's first phase is to prepare a series of maps that completely cover the Exclusive Economic Zone. The maps will be prepared using an Albers' Conic Equal-Area Projection at a scale of 1:1,000,000. An initial product of CONMAP will be a series of base map panels portraying the topographic and bathymetric relief, political boundaries and key geographic locations. Additional maps will be prepared which portray other data types and analytical themes.

  15. Forest Canopy Cover and Height from MISR in Topographically Complex Southwestern US Landscape Assessed with High Quality Reference Data

    NASA Technical Reports Server (NTRS)

    Chopping, Mark; North, Malcolm; Chen, Jiquan; Schaaf, Crystal B.; Blair, J. Bryan; Martonchik, John V.; Bull, Michael A.

    2012-01-01

    This study addresses the retrieval of spatially contiguous canopy cover and height estimates in southwestern USforests via inversion of a geometric-optical (GO) model against surface bidirectional reflectance factor (BRF) estimates from the Multi-angle Imaging SpectroRadiometer (MISR). Model inversion can provide such maps if good estimates of the background bidirectional reflectance distribution function (BRDF) are available. The study area is in the Sierra National Forest in the Sierra Nevada of California. Tree number density, mean crown radius, and fractional cover reference estimates were obtained via analysis of QuickBird 0.6 m spatial resolution panchromatic imagery usingthe CANopy Analysis with Panchromatic Imagery (CANAPI) algorithm, while RH50, RH75 and RH100 (50, 75, and 100 energy return) height data were obtained from the NASA Laser Vegetation Imaging Sensor (LVIS), a full waveform light detection and ranging (lidar) instrument. These canopy parameters were used to drive a modified version of the simple GO model (SGM), accurately reproducing patterns ofMISR 672 nm band surface reflectance (mean RMSE 0.011, mean R2 0.82, N 1048). Cover and height maps were obtained through model inversion against MISR 672 nm reflectance estimates on a 250 m grid.The free parameters were tree number density and mean crown radius. RMSE values with respect to reference data for the cover and height retrievals were 0.05 and 6.65 m, respectively, with of 0.54 and 0.49. MISR can thus provide maps of forest cover and height in areas of topographic variation although refinements are required to improve retrieval precision.

  16. Improving the spatial representation of soil properties and hydrology using topographically derived watershed model initialization processes

    NASA Astrophysics Data System (ADS)

    Easton, Z. M.; Fuka, D.; Collick, A.; Kleinman, P. J. A.; Auerbach, D.; Sommerlot, A.; Wagena, M. B.

    2015-12-01

    Topography exerts critical controls on many hydrologic, geomorphologic, and environmental biophysical processes. Unfortunately many watershed modeling systems use topography only to define basin boundaries and stream channels and do not explicitly account for the topographic controls on processes such as soil genesis, soil moisture distributions and hydrological response. We develop and demonstrate a method that uses topography to spatially adjust soil morphological and soil hydrological attributes [soil texture, depth to the C-horizon, saturated conductivity, bulk density, porosity, and the field capacities at 33kpa (~ field capacity) and 1500kpa (~ wilting point) tensions]. In order to test the performance of the method the topographical adjusted soils and standard SSURGO soil (available at 1:20,000 scale) were overlaid on soil pedon pit data in the Grasslands Soil and Water Research Lab in Resiel, TX. The topographically adjusted soils exhibited significant correlations with measurements from the soil pits, while the SSURGO soil data showed almost no correlation to measured data. We also applied the method to the Grasslands Soil and Water Research watershed using the Soil and Water Assessment Tool (SWAT) model to 15 separate fields as a proxy to propagate changes in soil properties into field scale hydrological responses. Results of this test showed that the topographically adjusted soils resulted better model predictions of field runoff in 50% of the field, with the SSURGO soils preforming better in the remainder of the fields. However, the topographically adjusted soils generally predicted baseflow response more accurately, reflecting the influence of these soil properties on non-storm responses. These results indicate that adjusting soil properties based on topography can result in more accurate soil characterization and, in some cases improve model performance.

  17. High-resolution global topographic index values for use in large-scale hydrological modelling

    NASA Astrophysics Data System (ADS)

    Marthews, T. R.; Dadson, S. J.; Lehner, B.; Abele, S.; Gedney, N.

    2015-01-01

    Modelling land surface water flow is of critical importance for simulating land surface fluxes, predicting runoff and water table dynamics and for many other applications of Land Surface Models. Many approaches are based on the popular hydrology model TOPMODEL (TOPography-based hydrological MODEL), and the most important parameter of this model is the well-known topographic index. Here we present new, high-resolution parameter maps of the topographic index for all ice-free land pixels calculated from hydrologically conditioned HydroSHEDS (Hydrological data and maps based on SHuttle Elevation Derivatives at multiple Scales) data using the GA2 algorithm (GRIDATB 2). At 15 arcsec resolution, these layers are 4 times finer than the resolution of the previously best-available topographic index layers, the compound topographic index of HYDRO1k (CTI). For the largest river catchments occurring on each continent we found that, in comparison with CTI our revised values were up to 20% lower in, e.g. the Amazon. We found the highest catchment means were for the Murray-Darling and Nelson-Saskatchewan rather than for the Amazon and St. Lawrence as found from the CTI. For the majority of large catchments, however, the spread of our new GA2 index values is very similar to those of CTI, yet with more spatial variability apparent at fine scale. We believe these new index layers represent greatly improved global-scale topographic index values and hope that they will be widely used in land surface modelling applications in the future.

  18. Cartographic mapping study

    NASA Technical Reports Server (NTRS)

    Wilson, C.; Dye, R.; Reed, L.

    1982-01-01

    The errors associated with planimetric mapping of the United States using satellite remote sensing techniques are analyzed. Assumptions concerning the state of the art achievable for satellite mapping systems and platforms in the 1995 time frame are made. An analysis of these performance parameters is made using an interactive cartographic satellite computer model, after first validating the model using LANDSAT 1 through 3 performance parameters. An investigation of current large scale (1:24,000) US National mapping techniques is made. Using the results of this investigation, and current national mapping accuracy standards, the 1995 satellite mapping system is evaluated for its ability to meet US mapping standards for planimetric and topographic mapping at scales of 1:24,000 and smaller.

  19. Topographic control of sorted circle morphology on Svalbard

    NASA Astrophysics Data System (ADS)

    Voigt, Joana; Hauber, Ernst; Reiss, Dennis; Hiesinger, Harald; Johnsson, Andreas; van Gasselt, Stephan; Balme, Matt; Head, Jim; de Verra, Jean-Pierre; Steinbrügge, Gregor; Jaumann, Ralf

    2015-04-01

    Patterned ground is a typical phenomenon in polar, subpolar and alpine regions [1]. As it is commonly (but not necessarily!) related to freeze-thaw cycles, its presence on Mars could possibly point to locations and periods where and when liquid water existed in the recent past [2]. Sorted circles are a class of patterned ground that was tentatively identified in Elysium Planitia (Mars) [3], but this interpretation has been challenged on the basis of physical considerations [4]. Without direct access to potential patterned ground on Mars, the analysis of terrestrial analogues can inform the interpretation of Martian landforms. Svalbard (Norway) offers a wide variety of permafrost features that are morphologically analogous to Martian cold-climate landforms [5]. It hosts some of the best examples of sorted circles on Earth, which are located on the westernmost tip of Brøgger peninsula, on a broad strand flat that is characterized by a series of postglacial beach ridges [6]. Here we report on our analysis of sorted circle morphology (especially their plan-view shape, i.e. their "roundness" or ellipticity) and its correlation with local topography (slopes, curvature). Sorted circle morphology was determined from HRSC-AX images (for details on the flight campaign and image properties see ref [5]) and through field work. Topographic information comes from a 50 cm gridded DEM derived from HRSC-AX stereo images. We measured sorted circle morphology (ellipticity, azimuth of major axis) along a WNW-ESE traverse that runs from the inland towards the sea and is oriented perpendicular to the local beach ridge trend. Selected areas with homogeneous sorted circle appearance were visually mapped, and compared to the average slope, aspect, and the calculated topographic wetness index (TWI). Furthermore the whole traverse was classified into four different morphologies of the sorted patterned ground (sorted circles, sorted "ellipses", sorted nets and areas without patterned ground

  20. Exploring the Influence of Topographic Correction and SWIR Spectral Information Inclusion on Burnt Scars Detection From High Resolution EO Imagery: A Case Study Using ASTER imagery

    NASA Astrophysics Data System (ADS)

    Said, Yahia A.; Petropoulos, George; Srivastava, Prashant K.

    2014-05-01

    Information on burned area estimates is of key importance in environmental and ecological studies as well as in fire management including damage assessment and planning of post-fire recovery of affected areas. Earth Observation (EO) provides today the most efficient way in obtaining such information in a rapid, consistent and cost-effective manner. The present study aimed at exploring the effect of topographic correction to the burnt area delineation in conditions characteristic of a Mediterranean environment using ASTER high resolution multispectral remotely sensed imagery. A further objective was to investigate the potential added-value of the inclusion of the shortwave infrared (SWIR) bands in improving the retrievals of burned area cartography from the ASTER data. In particular the capability of the Maximum Likelihood (ML), the Support Vector Machines (SVMs) and Object-based Image Analysis (OBIA) classification techniques has been examined herein for the purposes of our study. As a case study is used a typical Mediterranean site on which a fire event occurred in Greece during the summer of 2007, for which post-fire ASTER imagery has been acquired. Our results indicated that the combination of topographic correction (ortho-rectification) with the inclusion of the SWIR bands returned the most accurate results in terms of burnt area mapping. In terms of image processing methods, OBIA showed the best results and found as the most promising approach for burned area mapping with least absolute difference from the validation polygon followed by SVM and ML. All in all, our study provides an important contribution to the understanding of the capability of high resolution imagery such as that from ASTER sensor and corroborates the usefulness particularly of the topographic correction as an image processing step when in delineating the burnt areas from such data. It also provides further evidence that use of EO technology can offer an effective practical tool for the

  1. Despeckling SRTM And Other Topographic Data With A Denoising Algorithm

    NASA Astrophysics Data System (ADS)

    Stevenson, J. A.; Sun, X.; Mitchell, N. C.

    2012-12-01

    Noise in topographic data obscures features and increases error in geomorphic products calculated from DEMs. DEMs produced by radar remote sensing, such as SRTM, are frequently used for geomorphological studies, they often contain speckle noise which may significantly lower the quality of geomorphometric analyses. We introduce here an algorithm that denoises three-dimensional objects while preserving sharp features. It is free to download and simple to use. In this study the algorithm is applied to topographic data (synthetic landscapes, SRTM, TOPSAR) and the results are compared against using a mean filter, using LiDAR data as ground truth for the natural datasets. The level of denoising is controlled by two parameters: the threshold (T) that controls the sharpness of the features to be preserved, and the number of iterations (n) that controls how much the data are changed. The optimum settings depend on the nature of the topography and of the noise to be removed, but are typically in the range T = 0.87-0.99 and n = 1-10. If the threshold is too high, noise is preserved. A lower threshold setting is used where noise is spatially uncorrelated (e.g. TOPSAR), whereas in some other datasets (e.g. SRTM), where filtering of the data during processing has introduced spatial correlation to the noise, higher thresholds can be used. Compared to those filtered to an equivalent level with a mean filter, data smoothed by the denoising algorithm of Sun et al. [Sun, X., Rosin, P.L., Martin, R.R., Langbein, F.C., 2007. Fast and effective feature-preserving mesh denoising. IEEE Transactions on Visualisation and Computer Graphics 13, 925-938] are closer to the original data and to the ground truth. Changes to the data are smaller and less correlated to topographic features. Furthermore, the feature-preserving nature of the algorithm allows significant smoothing to be applied to flat areas of topography while limiting the alterations made in mountainous regions, with clear benefits

  2. Despeckling SRTM and other topographic data with a denoising algorithm

    NASA Astrophysics Data System (ADS)

    Stevenson, John A.; Sun, Xianfang; Mitchell, Neil C.

    2010-01-01

    Noise in topographic data obscures features and increases error in geomorphic products calculated from DEMs. DEMs produced by radar remote sensing, such as SRTM, are frequently used for geomorphological studies, they often contain speckle noise which may significantly lower the quality of geomorphometric analyses. We introduce here an algorithm that denoises three-dimensional objects while preserving sharp features. It is free to download and simple to use. In this study the algorithm is applied to topographic data (synthetic landscapes, SRTM, TOPSAR) and the results are compared against using a mean filter, using LiDAR data as ground truth for the natural datasets. The level of denoising is controlled by two parameters: the threshold ( T) that controls the sharpness of the features to be preserved, and the number of iterations ( n) that controls how much the data are changed. The optimum settings depend on the nature of the topography and of the noise to be removed, but are typically in the range T = 0.87-0.99 and n = 1-10. If the threshold is too high, noise is preserved. A lower threshold setting is used where noise is spatially uncorrelated (e.g. TOPSAR), whereas in some other datasets (e.g. SRTM), where filtering of the data during processing has introduced spatial correlation to the noise, higher thresholds can be used. Compared to those filtered to an equivalent level with a mean filter, data smoothed by the denoising algorithm of Sun et al. [Sun, X., Rosin, P.L., Martin, R.R., Langbein, F.C., 2007. Fast and effective feature-preserving mesh denoising. IEEE Transactions on Visualisation and Computer Graphics 13, 925-938.] are closer to the original data and to the ground truth. Changes to the data are smaller and less correlated to topographic features. Furthermore, the feature-preserving nature of the algorithm allows significant smoothing to be applied to flat areas of topography while limiting the alterations made in mountainous regions, with clear

  3. UAV photogrammetry for topographic monitoring of coastal areas

    NASA Astrophysics Data System (ADS)

    Gonçalves, J. A.; Henriques, R.

    2015-06-01

    Coastal areas suffer degradation due to the action of the sea and other natural and human-induced causes. Topographical changes in beaches and sand dunes need to be assessed, both after severe events and on a regular basis, to build models that can predict the evolution of these natural environments. This is an important application for airborne LIDAR, and conventional photogrammetry is also being used for regular monitoring programs of sensitive coastal areas. This paper analyses the use of unmanned aerial vehicles (UAV) to map and monitor sand dunes and beaches. A very light plane (SwingletCam) equipped with a very cheap, non-metric camera was used to acquire images with ground resolutions better than 5 cm. The Agisoft Photoscan software was used to orientate the images, extract point clouds, build a digital surface model and produce orthoimage mosaics. The processing, which includes automatic aerial triangulation with camera calibration and subsequent model generation, was mostly automated. To achieve the best positional accuracy for the whole process, signalised ground control points were surveyed with a differential GPS receiver. Two very sensitive test areas on the Portuguese northwest coast were analysed. Detailed DSMs were obtained with 10 cm grid spacing and vertical accuracy (RMS) ranging from 3.5 to 5.0 cm, which is very similar to the image ground resolution (3.2-4.5 cm). Where possible to assess, the planimetric accuracy of the orthoimage mosaics was found to be subpixel. Within the regular coastal monitoring programme being carried out in the region, UAVs can replace many of the conventional flights, with considerable gains in the cost of the data acquisition and without any loss in the quality of topographic and aerial imagery data.

  4. Elements of the Chicxulub Impact Structure as revealed in SRTM and surface GPS topographic data

    NASA Astrophysics Data System (ADS)

    Kobrick, M.; Kinsland, G. L.; Sanchez, G.; Cardador, M. H.

    2003-04-01

    Pope et al have utilized elevations from the Petroleos Mexicanos (PEMEX) gravity data files to show that the main component of the surface expression of the Chicxu-lub Impact Structure is a roughly semi-circular, low-relief depression about 90 km in diameter. They also identified other topographic features and the elements of the buried impact which possibly led to the development of these features. Kinsland et al presented a connection between these topographic anomalies, small gravity anomalies and buried structure of the impact. Shaded relief images from recently acquired SRTM elevation data clearly show the circular depression of the crater and the moat/cenote ring. In addition we can readily identify Inner trough 1, Inner trough 2 and Outer trough as defined by Pope et al. The agreement between the topographic maps of Pope et al, Kinsland et al and SRTM data are remarkable considering that the distribution and types of data in the sets are so different. We also have ground topographic data collected with a special "autonomous differ-ential GPS" system during summer 2002. Profiles from these data generally agree with both the gravity data based topographic maps and profiles extracted from the SRTM data. Preliminary analyses of our new data, SRTM and GPS, have uncovered features not previously recognized: 1) as shown by the GPS data the moat/cenote ring consists of two distinct depressions separated by about 10 km...perhaps separate ring faults, 2) in the SRTM data over the southern part of the crater and on southward for perhaps 20 km beyond the moat/ cenote ring there exists a pattern, as yet unexplained, of roughly concentric topographic features whose center lies at about 21deg 40min N and 89deg 25min W, about 50km NNE of the moat/cenote ring center. The corroboration and better definition of the previously recognized topographic features yielded by the two new forms of data strengthens the cases for these fea-tures and for their relevance to the underlying

  5. Topographic quantitative EEG amplitude in recovered alcoholics.

    PubMed

    Pollock, V E; Schneider, L S; Zemansky, M F; Gleason, R P; Pawluczyk, S

    1992-05-01

    Topographic measures of electroencephalographic (EEG) amplitude were used to compare recovered alcoholics (n = 14) with sex- and age-matched control subjects. Delta, alpha, and beta activity did not distinguish the groups, but regional differences in theta distribution did. Recovered alcoholics showed more uniform distributions of theta amplitudes in bilateral anterior and posterior regions compared with controls. Because a minimum of 5 years had elapsed since the recovered alcoholic subjects fulfilled DSM-III-R criteria for alcohol abuse or dependence, it is unlikely these EEG theta differences reflect the effects of withdrawal.

  6. A brief history of topographical anatomy.

    PubMed

    Standring, Susan

    2016-07-01

    This brief history of topographical anatomy begins with Egyptian medical papyri and the works known collectively as the Greco-Arabian canon, the time line then moves on to the excitement of discovery that characterised the Renaissance, the increasing regulatory and legislative frameworks introduced in the 18th and 19th centuries, and ends with a consideration of the impact of technology that epitomises the period from the late 19th century to the present day. This paper is based on a lecture I gave at the Winter Meeting of the Anatomical Society in Cambridge in December 2015, when I was awarded the Anatomical Society Medal.

  7. Ground Surface Visualization Using Red Relief Image Map for a Variety of Map Scales

    NASA Astrophysics Data System (ADS)

    Chiba, T.; Hasi, B.

    2016-06-01

    There are many methods to express topographical features of ground surface. In which, contour map has been the traditional method and along with development of digital data, surface model such as shaded relief map has been using for ground surface expression. Recently, data acquisition has been developed very much quick, demanding more advanced visualization method to express ground surface so as to effectively use the high quality data. In this study, the authors using the Red Relief Image Map (RRIM, Chiba et al., 2008) to express ground surface visualization for a variety of map scales. The authors used 30 m mesh data of SRTM to show the topographical features of western Mongolian and micro-topographical features of ground surface in tectonically active regions of Japan. The results show that, compared to traditional and other similar methods, the RRIM can express ground surface more precisely and 3-dimensionally, suggested its advanced usage for many fields of topographical visualization.

  8. Topographic Rossby Waves Generated by Tropical Cyclones

    NASA Astrophysics Data System (ADS)

    Dukhovskoy, D. S.; Morey, S. L.

    2013-05-01

    Analytical and numerical studies suggest that given appropriate slope, the ocean responds to a tropical storm with low-frequency motions trapped over a continental slope, the Coastal Trapped Waves. The presented study is focused on Topographic Rossby Waves (TRW), sub-inertial oscillations propagating over a sloping bottom. Generation and propagation of TRW under barotropic (Continental Shelf Waves or Shelf Waves) and baroclinic (Bottom Trapped Waves) approximations are discussed. A real-case model study of a storm surge in Apalachee Bay, northeastern Gulf of Mexico during Hurricane Dennis (July, 2005) is presented to demonstrate the role of the shelf waves in coastal inundation. The presentation also discusses excitation of baroclinic bottom-intensified wave motions on the continental slope by a tropical cyclone. An idealized model experiment demonstrates that a continental shelf that (1) responds to a storm as a baroclinic ocean and (2) has a slope steep enough to dominate the planetary β-effect (but small enough to prevent internal Kelvin-type modes) can support baroclinic topographic waves.

  9. Delineation, characterization, and classification of topographic eminences

    NASA Astrophysics Data System (ADS)

    Sinha, Gaurav

    Topographic eminences are defined as upwardly rising, convex shaped topographic landforms that are noticeably distinct in their immediate surroundings. As opposed to everyday objects, the properties of a topographic eminence are dependent not only on how it is conceptualized, but is also intrinsically related to its spatial extent and its relative location in the landscape. In this thesis, a system for automated detection, delineation and characterization of topographic eminences based on an analysis of digital elevation models is proposed. Research has shown that conceptualization of eminences (and other landforms) is linked to the cultural and linguistic backgrounds of people. However, the perception of stimuli from our physical environment is not subject to cultural or linguistic bias. Hence, perceptually salient morphological and spatial properties of the natural landscape can form the basis for generically applicable detection and delineation of topographic eminences. Six principles of cognitive eminence modeling are introduced to develop the philosophical foundation of this research regarding eminence delineation and characterization. The first step in delineating eminences is to automatically detect their presence within digital elevation models. This is achieved by the use of quantitative geomorphometric parameters (e.g., elevation, slope and curvature) and qualitative geomorphometric features (e.g., peaks, passes, pits, ridgelines, and valley lines). The process of eminence delineation follows that of eminence detection. It is posited that eminences may be perceived either as monolithic terrain objects, or as composites of morphological parts (e.g., top, bottom, slope). Individual eminences may also simultaneously be conceived as comprising larger, higher order eminence complexes (e.g., mountain ranges). Multiple algorithms are presented for the delineation of simple and complex eminences, and the morphological parts of eminences. The proposed eminence

  10. Diagnostic value of computerized EEG topographic analysis in epilepsy (preliminary data).

    PubMed

    Rogozea, R; Florea-Ciocoiu, V

    1993-01-01

    A computerized EEG topographic analysis (CETA) was carried out in 69 epileptics in order to evaluate the diagnostic value of such an investigation compared to that of the routine interictal EEG. The spectral frequency analysis of the bioelectrical activity in these patients was accomplished both by the fast Fourier transform and by the autoregression method. The obtained data were used for the spatial analysis of the electrical activity which was performed both by the interhemispheric coherence technique and by the color-coded topographic mapping in frequency bands. The data analysis showed that in 58 (84.1%) of the epileptics in whom routine EEG evidenced focal interictal bioelectrical abnormalities CETA also showed such abnormalities. However, CETA revealed focal abnormalities also in 8 (72.7%) out of the 11 epileptics in whom interictal EEG was interpreted as normal. The data analysis also showed that CETA was more efficient than EEG in the detection of focal abnormalities in the epilepsy with slow graphic elements, in the partial epilepsy, in the epilepsy with late onset and in the therapy-resistant epilepsy. The focal abnormalities evidenced by CETA were more expanded than those evidenced by routine EEG and the topographic maps indicated the focal involvement of a significant number of frequency bands. Considering the results, the authors make some appreciation regarding the diagnostic values of CETA in epilepsy.

  11. Exploring the topographic evolution of cinder cones

    NASA Astrophysics Data System (ADS)

    Arrowsmith, R.; Zibart, S.; Gleeman, E.; Alfano, F.; Clarke, A. B.; De'Michieli Vitturi, M.; Dekko, R.

    2013-12-01

    The simple original form and monogenetic character of cinder cones make them interesting targets for the study of landscape evolution. Topographic metrics such as cone height-width ratios and histograms of topographic slope yield useful and portable characterizations of cinder cone relative ages. We explored the topographic evolution of cinder cones by simulating surface processes using numerical and physical experimentation approaches and by collecting high resolution topography over exemplary elements of the San Francisco Volcanic field in northern Arizona. We identified a clear distinction in cone form development between those composed of transport-limited cinder only and those with a capping hard agglutinated rim. We employed a fully 2 dimensional numerical implementation of non linear diffusion with spatially variable transport rates. The agglutinate was idealized as an annulus of diminished transport rate. In the laboratory, we used a simple erosion model consisting of fine mist over a cone of fine sand. The agglutinate was represented with a spray adhesive cap. Non-agglutinated cones show a steady decrease in height and increase in width over time, resulting in a lower height-to-width ratios and greater rounding of profiles than agglutinated cones. The presence of an agglutinate top lessens the degree of rounding, producing a concave profile with a resistant 'neck' as the cone flank erodes, in contrast with non-agglutinated cones which develop into convex-concave profiles. The resistant agglutinate protects itself and the material directly underneath it from erosion; this material stays in place while the sediments around it are transported downslope. The slope distributions start out as bimodal: flat and angle of repose. In the non-agglutinated case, the rounding of the cone and broadening of the base produces a more continuous slope distribution with overall progressive slope decrease from the angle of repose and slope increase from the flat base. The

  12. Biodiversity and Topographic Complexity: Modern and Geohistorical Perspectives.

    PubMed

    Badgley, Catherine; Smiley, Tara M; Terry, Rebecca; Davis, Edward B; DeSantis, Larisa R G; Fox, David L; Hopkins, Samantha S B; Jezkova, Tereza; Matocq, Marjorie D; Matzke, Nick; McGuire, Jenny L; Mulch, Andreas; Riddle, Brett R; Roth, V Louise; Samuels, Joshua X; Strömberg, Caroline A E; Yanites, Brian J

    2017-03-01

    Topographically complex regions on land and in the oceans feature hotspots of biodiversity that reflect geological influences on ecological and evolutionary processes. Over geologic time, topographic diversity gradients wax and wane over millions of years, tracking tectonic or climatic history. Topographic diversity gradients from the present day and the past can result from the generation of species by vicariance or from the accumulation of species from dispersal into a region with strong environmental gradients. Biological and geological approaches must be integrated to test alternative models of diversification along topographic gradients. Reciprocal illumination among phylogenetic, phylogeographic, ecological, paleontological, tectonic, and climatic perspectives is an emerging frontier of biogeographic research.

  13. Topographic separation of two sympatric palms in the central Amazon - does dispersal play a role?

    NASA Astrophysics Data System (ADS)

    Gomes de Freitas, Cintia; Capellotto Costa, Flávia Regina; Svenning, Jens-Christian; Balslev, Henrik

    2012-02-01

    Despite broadly overlapping geographic distributions in the central Amazon basin, two congeneric palm species (Attalea attaleoides and Attalea microcarpa) have topographically separated distributions on a local scale in Reserva Ducke near Manaus. Our aim here was to determine if this local scale separation can be linked to (1) seedling stage specialization to different habitat conditions of the two species, and/or (2) environmentally-controlled seed dispersal. We assessed the role of these potential drivers by mapping the local distribution of the two species over a 25-km2 grid and testing for correlation to seed removal and seed germination patterns using seed sowing experiments. 360 seeds of each species were sown in 30 uniformly distributed plots (12 seeds of each species in each plot), and seed removal and germination were subsequently monitored. Adult populations of the two species showed opposite distribution patterns linked to topography. However, there was little evidence for specialization to different habitat conditions at the seedling stage: after 11 months, 26.1% of seeds of A. microcarpa had germinated along the entire topographic gradient, albeit with a tendency toward higher germination in more inclined areas. For A. attaleoides, only 2.2% seeds had germinated, and again along the entire topographic gradient. In contrast, there was evidence for environmentally-controlled seed dispersal: for both species, seed removal was higher in flat areas. Presence of adults did not affect germination or seed removal. Our results suggest that topographically differentiated distributions of A. attaleoides and A. microcarpa may be reinforced by steep slope avoidance by their seed dispersers. A direct environmental control mechanism remains to be identified to explain the consistent topographic associations, but our results show that this mechanism does not work at the seed germination stage.

  14. A remote sensing investigation of elevated sub-horizontal topographic surfaces in the Wichita Mountains, Oklahoma

    NASA Astrophysics Data System (ADS)

    Xue, Liang

    Multiple elevated horizontal to sub-horizontal topographic surfaces are present in the Wichita Mountains, Oklahoma. Elevated topographic surfaces, developed primarily on granite bedrock with gentle slopes of 0.5 to 7°,were investigated using 1) Digital Elevation Models (DEMs) extracted from NAD 27 UTM coordinates, 2) Google Earth imagery, and 3) USGS topographic maps. In the western Wichita Mountains prominent topographic surfaces at elevations of 720 +/- 5 m, 685 +/- 5 m, and 660 +/- 5 m are well preserved on at least four different mountains (e.g., Solder's Peak, King Mt.) and can be correlated with similar surfaces on at least seven different mountains (e.g., Mt. Scott, North Mt.) in the eastern Wichita Mountains. A less well developed surface at 585 +/-5 m is present in the eastern Wichita Mountains and may not be preserved in the western Wichita Mountains. These surfaces are interpreted to be relict pediments or remnants of a more extensive peneplain subsequently dissected as a result of long term time integrated changes in base level, climate, and/or tectonic uplift. Correlation of elevated sub-horizontal surfaces between the western and eastern Wichita Mountains suggests the Wichita Mountains basement behaved as a coherent crustal block since Mid Cenozoic. The presence of multiple elevated, sub-horizontal, regional topographic surfaces throughout the Wichita Mountains complicates direct correlation of these surfaces to the Southern High Plains peneplain using either a linear regression or an exponential fit along a line of projection. Thus, a finer resolution of the timing for individual elevated surfaces in the Wichita Mountains needs to be established.

  15. Topographic characterization of unworn contact lenses assessed by atomic force microscopy and wavelet transform.

    PubMed

    Ţălu, Ştefan; StȨpień, Krzysztof; Caglayan, Mustafa Oguzhan

    2015-11-01

    This paper analyses the three-dimensional (3-D) surface morphology of optic surface of unworn contact lenses (CLs) using atomic force microscopy (AFM) and wavelet transform. Refractive powers of all lens samples were 2.50 diopters. Topographic images were acquired in contact mode in air-conditioned medium (35% RH, 23°C). Topographic measurements were taken over a 5 µm × 5 µm area with 512 pixel resolution. Resonance frequency of the tip was 65 kHz. The 3-D surface morphology of CL unworn samples revealed (3-D) micro-textured surfaces that can be analyzed using (AFM) and wavelet transform. AFM and wavelet transform are accurate and sensitive tools that may assist CL manufacturers in developing CLs with optimal surface characteristics.

  16. Incorporating the effect of DEM resolution and accuracy for improved flood inundation mapping

    NASA Astrophysics Data System (ADS)

    Saksena, Siddharth; Merwade, Venkatesh

    2015-11-01

    Topography plays a major role in determining the accuracy of flood inundation areas. However, many areas in the United States and around the world do not have access to high quality topographic data in the form of Digital Elevation Models (DEM). For such areas, an improved understanding of the effects of DEM properties such as horizontal resolution and vertical accuracy on flood inundation maps may eventually lead to improved flood inundation modeling and mapping. This study attempts to relate the errors arising from DEM properties such as spatial resolution and vertical accuracy to flood inundation maps, and then use this relationship to create improved flood inundation maps from coarser resolution DEMs with low accuracy. The results from the five stream reaches used in this study show that water surface elevations (WSE) along the stream and the flood inundation area have a linear relationship with both DEM resolution and accuracy. This linear relationship is then used to extrapolate the water surface elevations from coarser resolution DEMs to get water surface elevations corresponding to a finer resolution DEM. Application of this approach show that improved results can be obtained from flood modeling by using coarser and less accurate DEMs, including public domain datasets such as the National Elevation Dataset and Shuttle Radar Topography Mission (SRTM) DEMs. The improvement in the WSE and its application to obtain better flood inundation maps is dependent on the study reach characteristics such as land use, valley shape, reach length and width. Application of the approach presented in this study on more reaches may lead to development of guidelines for flood inundation mapping using coarser resolution and less accurate topographic datasets.

  17. Friction Anisotropy with Respect to Topographic Orientation

    PubMed Central

    Yu, Chengjiao; Wang, Q. Jane

    2012-01-01

    Friction characteristics with respect to surface topographic orientation were investigated using surfaces of different materials and fabricated with grooves of different scales. Scratching friction tests were conducted using a nano-indentation-scratching system with the tip motion parallel or perpendicular to the groove orientation. Similar friction anisotropy trends were observed for all the surfaces studied, which are (1) under a light load and for surfaces with narrow grooves, the tip motion parallel to the grooves offers higher friction coefficients than does that perpendicular to them, (2) otherwise, equal or lower friction coefficients are found under this motion. The influences of groove size relative to the diameter of the mating tip (as a representative asperity), surface contact stiffness, contact area, and the characteristic stiction length are discussed. The appearance of this friction anisotropy is independent of material; however, the boundary and the point of trend transition depend on material properties. PMID:23248751

  18. Topographic Response to the Yakutat Block Collision

    NASA Technical Reports Server (NTRS)

    Stock, Joann M.

    2000-01-01

    The principal objective of this grant and this research were to investigate the topographic development of an active glaciated orogenic belt in southern Alaska as that development relates to patterns of erosion and crustal deformation. A specific objective of the research was to investigate feedbacks between mountain building, orographic affects on climate, and patterns of exhumation and rock uplift. To that end, an orogen-scale analysis of topography was conducted with the aid of digital elevation models, magnitudes and patterns of crustal deformation were compiled from existing literature, present and past climate patterns were constrained using the modern and past distribution of glaciers, and styles, magnitudes, and extent of erosion were constrained with observations from the 1998 field season.

  19. Unique topographic distribution of greyhound nonsuppurative meningoencephalitis.

    PubMed

    Terzo, Eloisa; McConnell, J Fraser; Shiel, Robert E; McAllister, Hester; Behr, Sebastien; Priestnall, Simon L; Smith, Ken C; Nolan, Catherine M; Callanan, John J

    2012-01-01

    Greyhound nonsuppurative meningoencephalitis is an idiopathic breed-associated fatal meningoencephalitis with lesions usually occurring within the rostral cerebrum. This disorder can only be confirmed by postmortem examination, with a diagnosis based upon the unique topography of inflammatory lesions. Our purpose was to describe the magnetic resonance (MR) imaging features of this disease. Four Greyhounds with confirmed Greyhound nonsuppurative meningoencephalitis were evaluated by MR imaging. Lesions predominantly affected the olfactory lobes and bulbs, frontal, and frontotemporal cortical gray matter, and caudate nuclei bilaterally. Fluid attenuation inversion recovery (FLAIR) and T2 weighted spin-echo (T2W) sequences were most useful to assess the nature, severity, extension, and topographic pattern of lesions. Lesions were predominantly T2-hyperintense and T1-isointense with minimal or absent contrast enhancement.

  20. Topographic optical profilometry of steep slope micro-optical transparent surfaces.

    PubMed

    Antón, Juan Carlos Martínez; Alonso, Jose; Pedrero, Jose Antonio Gómez

    2015-04-06

    Optical profilometers based on light reflection may fail at surfaces presenting steep slopes and highly curved features. Missed light, interference and diffraction at steps, peaks and valleys are some of the reasons. Consequently, blind areas or profile artifacts may be observed when using common reflection micro-optical profilometers (confocal, scanning interferometers, etc…). The Topographic Optical Profilometry by Absorption in Fluids (TOPAF) essentially avoids these limitations. In this technique an absorbing fluid fills the gap between a reference surface and the surface to profile. By comparing transmission images at two different spectral bands we obtain a reliable topographic map of the surface. In this contribution we develop a model to obtain the profile under micro-optical observation, where high numerical aperture (NA) objectives are mandatory. We present several analytical and experimental results, validating the technique's capabilities for profiling steep slopes and highly curved micro-optical surfaces with nanometric height resolution.

  1. Implications of topographic relief on the brittle-to-plastic boundary beneath the southern Central Range, Taiwan

    NASA Astrophysics Data System (ADS)

    Cavallotti, C. J.; Lewis, J. C.

    2015-12-01

    The result of the ongoing arc-continent collision between the Eurasian (EU) and Philippine Sea (PSP) plates, Taiwan is an important tool in understanding the real time mechanics of the mountain building process. We show an apparent gap in seismicity beneath Taiwan's Southern Central Range that may represent the presence of a volume of rock lacking the shear strength required to record brittle processes. A spatially accurate 3D map was created, utilizing data recorded for over 8000 seismic events beneath Taiwan and the surrounding area, and shows an elongate aseismic volume trending northeast southwest generally parallel to the topographic grain of the island. Published P-wave data shows an area nearly coincident with the aseismic zone with lower velocities at depths of 7.5km in the west to nearly 40km in the east which suggests a difference in density (and rheology) from the surrounding, seismically active, areas. Strain inversions assuming a micropolar model for crustal deformation suggest systematic changes in strain tensor geometry from east to west across the hypothesized density boundary. Preliminary results indicate that seismogenic strain along the western margin of the aseismic zone accommodates crustal thinning with stretching oblique to the orogen. In contrast, on the east side of the aseismic zone we see crustal thickening with minimum stretching (shortening) subparallel to PSP-EU motion. The profound change in strain geometry suggests that the asiesmic zone is a partially ductile volume of rock caused by interactions of the EU and PSP beneath Taiwan. We hypothesize that if the rheology contrast is sufficient, higher spatial resolution inversions may reveal that events near the seismic/aseismic interface exhibit Andersonian-like behavior wherein one principal strain axis would lie orthogonal at any given point to a surface mapped to this boundary. Alternatively, if the contrast is smaller the inverted strain geometries may vary systematically and provide

  2. Accurate Finite Difference Algorithms

    NASA Technical Reports Server (NTRS)

    Goodrich, John W.

    1996-01-01

    Two families of finite difference algorithms for computational aeroacoustics are presented and compared. All of the algorithms are single step explicit methods, they have the same order of accuracy in both space and time, with examples up to eleventh order, and they have multidimensional extensions. One of the algorithm families has spectral like high resolution. Propagation with high order and high resolution algorithms can produce accurate results after O(10(exp 6)) periods of propagation with eight grid points per wavelength.

  3. Accurate monotone cubic interpolation

    NASA Technical Reports Server (NTRS)

    Huynh, Hung T.

    1991-01-01

    Monotone piecewise cubic interpolants are simple and effective. They are generally third-order accurate, except near strict local extrema where accuracy degenerates to second-order due to the monotonicity constraint. Algorithms for piecewise cubic interpolants, which preserve monotonicity as well as uniform third and fourth-order accuracy are presented. The gain of accuracy is obtained by relaxing the monotonicity constraint in a geometric framework in which the median function plays a crucial role.

  4. A Neural Basis for Developmental Topographic Disorientation

    PubMed Central

    Aminoff, Elissa M.; Kastner, Sabine; Behrmann, Marlene

    2015-01-01

    Developmental topographic disorientation (DTD) is a life-long condition in which affected individuals are severely impaired in navigating around their environment. Individuals with DTD have no apparent structural brain damage on conventional imaging and the neural mechanisms underlying DTD are currently unknown. Using functional and diffusion tensor imaging, we present a comprehensive neuroimaging study of an individual, J.N., with well defined DTD. J.N. has intact scene-selective responses in the parahippocampal place area (PPA), transverse occipital sulcus, and retrosplenial cortex (RSC), key regions associated with scene perception and navigation. However, detailed fMRI studies probing selective tuning properties of these regions, as well as functional connectivity, suggest that J.N.'s RSC has an atypical response profile and an atypical functional coupling to PPA compared with human controls. This deviant functional profile of RSC is not due to compromised structural connectivity. This comprehensive examination suggests that the RSC may play a key role in navigation-related processing and that an alteration of the RSC's functional properties may serve as the neural basis for DTD. SIGNIFICANCE STATEMENT Individuals with developmental topographic disorientation (DTD) have a life-long impairment in spatial navigation in the absence of brain damage, neurological conditions, or basic perceptual or memory deficits. Although progress has been made in identifying brain regions that subserve normal navigation, the neural basis of DTD is unknown. Using functional and structural neuroimaging and detailed statistical analyses, we investigated the brain regions typically involved in navigation and scene processing in a representative DTD individual, J.N. Although scene-selective regions were identified, closer scrutiny indicated that these areas, specifically the retrosplenial cortex (RSC), were functionally disrupted in J.N. This comprehensive examination of a

  5. The topographic signature of anthropogenic geomorphic processes

    NASA Astrophysics Data System (ADS)

    Tarolli, P.; Sofia, G.

    2014-12-01

    Within an abiotic-dominated context, geomorphologic patterns and dynamics are single expressions of trade-offs between the physical resistance forces, and the mechanical and chemical forces related to climate and erosion. Recently, however, it has become essential for the geomorphological community to take into account also biota as a fundamental geomorphologic agent acting from local to regional scales. However, while there is a recent flourishing literature about the impacts of vegetation on geomorphic processes, the study of anthropogenic pressure on geomorphology is still at its early stages. Humans are indeed among the most prominent geomorphic agents, redistributing land surface, and causing drastic changes to the geomorphic organization of the landscape (e.g. intensive agriculture, urbanization), with direct consequences on land degradation and watershed response. The reconstruction or identification of artificial or anthropogenic topographies, therefore, provides a mechanism for quantifying anthropogenic changes to the landscape systems in the context of the Anthropocene epoch. High-resolution topographic data derived from the recent remote sensing technologies (e.g. lidar, SAR, SfM), offer now new opportunities to recognize better understand geomorphic processes from topographic signatures, especially in engineered landscapes where the direct anthropic alteration of processes is significant. It is possible indeed to better recognize human-induced geomorphic and anthropogenic features (e.g. road networks, agricultural terraces), and the connected erosion. The study presented here may allow improved understanding and targeted mitigation of the processes driving geomorphic changes during urban development and help guide future research directions for development-based watershed studies. Human society is deeply affecting the environment with consequences on the landscape. It is therefore fundamental to establish greater management control over the Earth

  6. Topographic models for predicting malaria vector breeding habitats: potential tools for vector control managers

    PubMed Central

    2013-01-01

    predictability of habitat types varied. Drains, foot-prints, puddles and swamp habitat types were most predictable. Conclusions Both SRTM and ASTER models had similar predictive potentials, which were sufficiently accurate to predict vector habitats. The free availability of these DEMs suggests that topographic predictive models could be widely used by vector control managers in Africa to complement malaria control strategies. PMID:23324389

  7. Previously Unrecognized Large Lunar Impact Basins Revealed by Topographic Data

    NASA Technical Reports Server (NTRS)

    Frey, Herbert V.

    2008-01-01

    The discovery of a large population of apparently buried impact craters on Mars, revealed as Quasi- Circular Depressions (QCDs) in Mars Orbiting Laser Altimeter (MOLA) data [1,2,3] and as Circular Thin Areas (CTAs) [4] in crustal thickness model data [5] leads to the obvious question: are there unrecognized impact features on the Moon and other bodies in the solar system? Early analysis of Clementine topography revealed several large impact basins not previously known [6,7], so the answer certainly is "Yes." How large a population of previously undetected impact basins, their size frequency distribution, and how much these added craters and basins will change ideas about the early cratering history and Late Heavy Bombardment on the Moon remains to be determined. Lunar Orbiter Laser Altimeter (LOLA) data [8] will be able to address these issues. As a prelude, we searched the state-of-the-art global topographic grid for the Moon, the Unified Lunar Control Net (ULCN) [9] for evidence of large impact features not previously recognized by photogeologic mapping, as summarized by Wilhelms [lo].

  8. Proposed classification for topographic patterns seen after penetrating keratoplasty

    PubMed Central

    Karabatsas, C.; Cook, S.; Sparrow, J.

    1999-01-01

    AIMS—To create a clinically useful classification for post-keratoplasty corneas based on corneal topography.
METHODS—A total of 360 topographic maps obtained with the TMS-1, from 95 eyes that had undergone penetrating keratoplasty (PKP), were reviewed independently by two examiners in a masked fashion, and were categorised according to a proposed classification scheme.
RESULTS—A high interobserver agreement (88% in the first categorisation) was achieved. At 12 months post-PKP, a regular astigmatic pattern was observed in 20/85 cases (24%). This was subclassified as oval in three cases (4%), oblate symmetric bow tie in six cases (7%), prolate asymmetric bow tie in six cases (7%), and oblate asymmetric bow tie in five cases (6%). An irregular astigmatic pattern was observed in 61/85 cases (72%), subclassified as prolate irregular in five cases (6%), oblate irregular in four cases (5%), mixed in seven cases (8%), steep/flat in 11 cases (13%), localised steepness in 16 cases (19%), and triple pattern in three cases (4%). Regular astigmatic patterns were associated with significantly higher astigmatism measurements. The surface asymmetry index was significantly lower in the regular astigmatic patterns.
CONCLUSIONS—In post-PKP corneas, the prevalence of irregular astigmatism is about double that of regular astigmatism, with a trend for increase of the irregular patterns over time.

 Keywords: keratoplasty; corneal topography; astigmatism PMID:10434860

  9. Topographic approach to the study of the human body.

    PubMed

    Burykh, Michael P

    2004-07-01

    Recent developments in medical imaging techniques such as ultrasound, computed tomography (CT), and magnetic resonance imaging (MRI) have been explosive. These modalities provide 3D information about the human body and assess tissue damage in various pathological conditions. To complement the diagnostic usefulness of these imaging techniques, we have designed a system of topographic coordinates based on the principles of global projection cartography in which lines of latitude and longitudes are assigned to the surface of the human body. We designated the median sagittal plane as corresponding to the Greenwich Meridian (zero longitude) in global cartography. From the median sagittal plane (M0), vertical lines of longitude or "great circles" divide the body into 12 zones that are 30 degrees apart. Parallel lines of latitude are assigned according to surface anatomy landmarks. Studying the 3D reconstruction of anatomical structures is important for: 1) devising a system of coordinates; 2) allowing biomedical measurements to be made; and 3) drawing maps that may be useful in some clinical procedures (e.g., biopsies).

  10. Deep Meridional Circulation in the Southern Ocean is Topographically Controlled

    NASA Astrophysics Data System (ADS)

    Chapman, Christopher; Sallée, Jean-Baptiste

    2016-04-01

    The Southern Ocean fundamentally influences the Earth's climate through it's strong control over the deep meridional circulation. This circulation moves vast amounts of mass, heat and tracers, acting to redistribute them throughout the global ocean. However, due to its complex dynamics and a lack of observations, the Southern Ocean's deep circulation is poorly understood. We present a new interpretation of the deep circulation by using a network of Lagrangian autonomous floats to derive the first observation-based maps of the deep meridional flow. Contrary to most existing studies that employ a quasi 2-dimensional framework, we find fluxes are strongly localised near large topographic features, with alternating northward and southward fluxes effectively cancelling each other, leaving a small residual that contributes to the total flux. A simple force-balance indicates that the dynamics that give rise to these fluxes occur due to steering of the large-scale Antarctic Circumpolar Current by the bottom topography. Finally, we discuss the implications of this work, noting that strongly localised fluxes which yield a small yet important net meridional flux, will influence the redistribution of heat and tracers within and between ocean basins, water mass transformation and the deep storage of CO2.

  11. Corneal topographic changes in healthy siblings of patients with keratoconus

    PubMed Central

    Besharati, Mohammad Reza; Shoja, Mohammad Reza; Manaviat, Masoud Reza; Kheirandish, Maryam; Rad, Maasome Zare

    2010-01-01

    AIM To describe the involvement in relatives of keratoconus (KCN) patients with corneal topography map. METHODS A total of 150 siblings of 300 eyes of 75 KCN patients referred to corneal clinic were studied and experienced complete slit-lamp, refraction examinations and topographic cornea maps provided by videophotoker-atography. ANOVA, Fisher exact and Chi-square tests performed to compare of results. RESULTS Of 150 siblings, 56% were female and 44% were male with average age of 21 (range 15-39) years. KCN and suspect KCN diagnosed in 12.3% and 6.6% respectively. The central keratometry (CK) was 46.5±4.51 dioptr (D) in KCN and 45.66±1.52D in suspect KCN. Inferior-superior value (I-S) was 3.51±2.5D in KCN and 1.56±1.22D in suspect KCN. In KCN condition the oval pattern was 67.6% (n=25) and Round pattern detected 32.4% (n=12). In suspect KCN these patterns detected 90% and 10% respectively. Refractive errors in KCN were -7.5 to +1.25 dioptr (-1.25±1.83), in suspect KCN 0.45 to -4.2 dioptr (-0.68±0.76) and in healthy group 2.75 to -7.5 dioptr (-0.6±1.12). Astigmatism was mild in 22.7%, moderate and sever astigmatism in 18.3% in KCN and suspect KCN CONCLUSION Increasing KCN condition in healthy siblings of KCN patients shows require to screening plan to early diagnose and cautionly treatment of contact lens in these individuals. PMID:22553522

  12. ORTHOPHOTOQUAD MAPPING PROGRAM FOR ALASKA.

    USGS Publications Warehouse

    Plasker, James R.

    1985-01-01

    The U. S. Geological Survey (USGS) is the lead civilian mapping agency in the United States and is responsible for creating and maintaining numerous map series. In Alaska the standard topographic map series is at a scale of 1:63,360, and maps at that scale have been available from the USGS since the late 1940's. In 1981 USGS initiated production of orthophotoquads of Alaska, also at a scale of 1:63,360 to be compatible with the topographic map series. An orthophotoquad (OQ) is prepared from a rectified or differentially rectified and scaled black-and-white photographic image published in quadrangle format. The current status of the Alaska OQ program is summarized and sample OQ's are illustrated. Engineering applications of orthophotoquads are discussed, with an emphasis on their use in the on-shore and near-shore areas. A combination of orthophoto imagery and topographic line maps is described as a planning and engineering tool. Sources of map separates and orthophotoquads are provided.

  13. Maps of Quadrangle 3262, Farah (421) and Hokumat-E-Pur-Chaman (422) Quadrangles, Afghanistan

    USGS Publications Warehouse

    ,

    2007-01-01

    By selecting one of the four series options shown below, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively, the user will be taken to that map.

  14. Maps of Quadrangle 3162, Chakhansur (603) and Kotalak (604) Quadrangles, Afghanistan

    USGS Publications Warehouse

    ,

    2007-01-01

    By selecting one of the four series options shown below, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively, the user will be taken to that map.

  15. Maps of Quadrangle 3568, Polekhomri (503) and Charikar (504) Quadrangles, Afghanistan

    USGS Publications Warehouse

    ,

    2007-01-01

    By selecting one of the four series options shown below, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively, the user will be taken to that map.

  16. Maps of Quadrangle 3466, Lal-Sarjangal (507) and Bamyan (508) Quadrangles, Afghanistan

    USGS Publications Warehouse

    ,

    2007-01-01

    By selecting one of the four series options shown below, namely, -A, -B, -C, and -D for the geologic, topographic, Landsat natural-color, and Landsat false-color maps, respectively, the user will be taken to that map.

  17. 19. John and James Dobson Carpet Mills, West parcel, topographical ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    19. John and James Dobson Carpet Mills, West parcel, topographical plan, 1986. Barton and Martin, Engineers. 'Topographical Plan for Dobson Mills.' Prepared for Rouse Urban Housing, Inc., Philadelphia, Pennsylvania, 1986. - John & James Dobson Carpet Mill (West Parcel), 4041-4055 Ridge Avenue, Philadelphia, Philadelphia County, PA

  18. Increasing the availability of national mapping products.

    USGS Publications Warehouse

    Roney, J.I.; Ogilvie, B.C.

    1981-01-01

    A discussion of the means employed by the US Geological Survey to facilitate map usage, covering aspects of project Map Accessibility Program including special rolled and folded map packaging, new market testing, parks and campgrounds program, expanded map dealer program, new booklet-type State sales index and catalog and new USGS map reference code. The USGS is seen as the producer of a tremendous nation-wide inventory of topographic and related map products available in unprecedented types, formats and scales, and as endeavouring to increase access to its products. The new USGS map reference code is appended. -J.C.Stone

  19. Topographic and Air-Photo Lineaments in Various Locations Related to Geothermal Exploration in Colorado

    DOE Data Explorer

    Zehner, Richard

    2012-02-01

    Title: Topographic and Air-Photo Lineaments in Various Locations Related to Geothermal Exploration in Colorado Tags: Colorado, lineaments, air-photo, geothermal Summary: These line shapefiles trace apparent topographic and air-photo lineaments in various counties in Colorado. It was made in order to identify possible fault and fracture systems that might be conduits for geothermal fluids, as part of a DOE reconnaissance geothermal exploration program. Description: Geothermal fluids commonly utilize fault and fractures in competent rocks as conduits for fluid flow. Geothermal exploration involves finding areas of high near-surface temperature gradients, along with a suitable “plumbing system” that can provide the necessary permeability. Geothermal power plants can sometimes be built where temperature and flow rates are high. This line shapefile is an attempt to use desktop GIS to delineate possible faults and fracture orientations and locations in highly prospective areas prior to an initial site visit. Geochemical sampling and geologic mapping could then be centered around these possible faults and fractures. To do this, georeferenced topographic maps and aerial photographs were utilized in an existing GIS, using ESRI ArcMap 10.0 software. The USA_Topo_Maps and World_Imagery map layers were chosen from the GIS Server at server.arcgisonline.com, using a UTM Zone 13 NAD27 projection. This line shapefile was then constructed over that which appeared to be through-going structural lineaments in both the aerial photographs and topographic layers, taking care to avoid manmade features such as roads, fence lines, and utility right-of-ways. Still, it is unknown what actual features these lineaments, if they exist, represent. Although the shapefiles are arranged by county, not all areas within any county have been examined for lineaments. Work was focused on either satellite thermal infrared anomalies, known hot springs or wells, or other evidence of geothermal systems

  20. Accurate taxonomic assignment of short pyrosequencing reads.

    PubMed

    Clemente, José C; Jansson, Jesper; Valiente, Gabriel

    2010-01-01

    Ambiguities in the taxonomy dependent assignment of pyrosequencing reads are usually resolved by mapping each read to the lowest common ancestor in a reference taxonomy of all those sequences that match the read. This conservative approach has the drawback of mapping a read to a possibly large clade that may also contain many sequences not matching the read. A more accurate taxonomic assignment of short reads can be made by mapping each read to the node in the reference taxonomy that provides the best precision and recall. We show that given a suffix array for the sequences in the reference taxonomy, a short read can be mapped to the node of the reference taxonomy with the best combined value of precision and recall in time linear in the size of the taxonomy subtree rooted at the lowest common ancestor of the matching sequences. An accurate taxonomic assignment of short reads can thus be made with about the same efficiency as when mapping each read to the lowest common ancestor of all matching sequences in a reference taxonomy. We demonstrate the effectiveness of our approach on several metagenomic datasets of marine and gut microbiota.

  1. Geological assessing of urban environments with a systematic mapping survey: The 1:5000 urban geological map of Catalonia

    NASA Astrophysics Data System (ADS)

    Vilà, Miquel; Pi, Roser; Cirés, Jordi; de Paz, Ana; Berástegui, Xavier

    2010-05-01

    The ground features of urban areas and the geologic processes that operate on them are, in general, strongly altered from their natural original condition as a result of anthropogenic activities. Assessing the stability of the ground, the flooding areas, and, the health risk as a consequence of soil pollution, are, among others, fundamental topics of urban areas that require a better understanding. The development of systematic urban geological mapping projects provides valuable resources to address these issues. Since 2007, the Institut Geologic de Catalunya (IGC) runs an urban geological mapping project, to provide accurate geologic information of county capitals and towns of more than 10000 inhabitants of Catalonia. The urban zones of 131 towns will be surveyed for this project, totalizing an area of about 2200 km2 to be mapped in 15 years. According to the 2008 census, the 82 % of the population of Catalonia (7.242.458 inhabitants) lives in the areas to be mapped in this project. The mapping project integrates in a GIS environment the following subjects: - Data from pre-existing geotechnical reports, historical geological and topographical maps and, from historical aerial photographs. - Data from available borehole databases. - Geological characterization of outcrops inside the urban network and neighbouring areas. - Geological, chemical and physical characterisation of representative rocks, sediments and soils. - Ortophotographs (0.5 m pixel size) and digital elevation models (5 meter grid size) made from historical aerial photographs, to depict land use changes, artificial deposits and geomorphological elements that are either hidden or destroyed by urban sprawl. - Detailed geological mapping of quaternary sediments, subsurface bedrock and artificial deposits. - Data from subsurface prospection in areas with insufficient or confuse data. - 3D modelling of the main geological surfaces such as the top of the pre-quaternary basement. All the gathered data is

  2. Neural Activity during Voluntary Movements in Each Body Representation of the Intracortical Microstimulation-Derived Map in the Macaque Motor Cortex

    PubMed Central

    Kunori, Nobuo; Murata, Yumi

    2016-01-01

    In order to accurately interpret experimental data using the topographic body map identified by conventional intracortical microstimulation (ICMS), it is important to know how neurons in each division of the map respond during voluntary movements. Here we systematically investigated neuronal responses in each body representation of the ICMS map during a reach-grasp-retrieval task that involves the movements of multiple body parts. The topographic body map in the primary motor cortex (M1) generally corresponds to functional divisions of voluntary movements; neurons at the recording sites in each body representation with movement thresholds of 10 μA or less were differentially activated during the task, and the timing of responses was consistent with the movements of the body part represented. Moreover, neurons in the digit representation responded differently for the different types of grasping. In addition, the present study showed that neural activity depends on the ICMS current threshold required to elicit body movements and the location of the recording on the cortical surface. In the ventral premotor cortex (PMv), no correlation was found between the response properties of neurons and the body representation in the ICMS map. Neural responses specific to forelimb movements were often observed in the rostral part of PMv, including the lateral bank of the lower arcuate limb, in which ICMS up to 100 μA evoked no detectable movement. These results indicate that the physiological significance of the ICMS-derived maps is different between, and even within, areas M1 and PMv. PMID:27494282

  3. Considerations on geomorphological maps for territorial planning in the Modena Apennines (Northern Italy)

    NASA Astrophysics Data System (ADS)

    Castaldini, D.; Ghinoi, A.; Maccaferri, A.

    2012-02-01

    This contribution shows, through some examples, that the current instability processes sometimes do not completely correspond (concerning presence, location, state of activity and/or extent) with those mapped by PTCP Hydrogeological Hazard Maps, which is the document used by the Province Administration for its territorial planning. The differences highlighted are due to different causes. One of them is the fact that the PTCP Hydrogeological Hazard Maps are practically derived from the Regional Geological maps in which superficial deposits have secondary importance, while bedrock and structural-tectonic aspects are given the highest relevance. Another cause is represented by the very active and intense geomorphological dynamics of the Apennines which may produce or reactivate instability conditions. An important aspect to underline is that the PTCP Hydrogeological Hazard Maps identify areas with planning constraints, which have effects at a municipal scale; it does so by starting from a cartographical basis whose primary aim is not the definition of instability processes and whose updating is not homogeneous. Taking into account this aspect, the PTCP Hydrogeological Hazard Maps should be updated not only on the base of traditional geological mapping, but also following the criteria of detailed geomorphological mapping which can precisely define the genesis, dynamics and morphometry of instability phenomena. An important consideration, in relation to territorial planning, is that the PTCP Hydrogeological Hazard Maps should be used just as a "base document", which requires more necessary detailed deepening at the municipal scale, accomplished through accurate geomorphological mapping, at least for the areas that are going to be urbanized. The geomorphological mapping should also update those elements of the landscape which could have changed from the official topographic base map. Detailed geomorphological mapping, possibly undertaken with the methodology proposed in

  4. Accurate quantum chemical calculations

    NASA Technical Reports Server (NTRS)

    Bauschlicher, Charles W., Jr.; Langhoff, Stephen R.; Taylor, Peter R.

    1989-01-01

    An important goal of quantum chemical calculations is to provide an understanding of chemical bonding and molecular electronic structure. A second goal, the prediction of energy differences to chemical accuracy, has been much harder to attain. First, the computational resources required to achieve such accuracy are very large, and second, it is not straightforward to demonstrate that an apparently accurate result, in terms of agreement with experiment, does not result from a cancellation of errors. Recent advances in electronic structure methodology, coupled with the power of vector supercomputers, have made it possible to solve a number of electronic structure problems exactly using the full configuration interaction (FCI) method within a subspace of the complete Hilbert space. These exact results can be used to benchmark approximate techniques that are applicable to a wider range of chemical and physical problems. The methodology of many-electron quantum chemistry is reviewed. Methods are considered in detail for performing FCI calculations. The application of FCI methods to several three-electron problems in molecular physics are discussed. A number of benchmark applications of FCI wave functions are described. Atomic basis sets and the development of improved methods for handling very large basis sets are discussed: these are then applied to a number of chemical and spectroscopic problems; to transition metals; and to problems involving potential energy surfaces. Although the experiences described give considerable grounds for optimism about the general ability to perform accurate calculations, there are several problems that have proved less tractable, at least with current computer resources, and these and possible solutions are discussed.

  5. A structural fabric defined by topographic lineaments: Correlation with Tertiary deformation of Ellesmere and Axel Heiberg Islands, Canadian Arctic

    NASA Technical Reports Server (NTRS)

    Oakey, Gordon

    1994-01-01

    Digital topographic contours from four 1:250000 scale maps have been gridded to produce a digital elevation model for part of Ellesmere and Axel Heiberg islands in the Canadian Arctic Islands. Gradient calculations were used to define both east and west dipping slopes defining a pattern of lineaments that have been compared with mapped geological structures. In ice-covered areas, where geological mapping was not possible, well-defined topographic lineaments have been identified and are correlated to extensions of major structural features. The northeast-southwest patterns of both topographic lineaments and mapped structures are strongly unimodal and support a single compressive event oriented at 67 deg west of north. This orientation is coincidental with the convergence direction calculated from the kinematic poles of rotation for Greenland relative to North America between 56 and 35 Ma. A minor secondary peak at 70 east of north is observed for thrust and normal fault solutions and is not directly related to the predicted convergence direction. Whether this represents a unique phase of deformation or is a subcomponent of a single event is not known. The agreement of structural components, lineament orientations, and convergence direction suggests an overwhelming over print of Eurekan deformation on any preexisting structural fabric. This study confirms, for the first time, an excellent compatibility between geological and geophysical constraints for the timing and geometry of the Eurekan orogeny.

  6. The topographical model of multiple sclerosis

    PubMed Central

    Cook, Karin; De Nino, Scott; Fletcher, Madhuri

    2016-01-01

    Relapses and progression contribute to multiple sclerosis (MS) disease course, but neither the relationship between them nor the spectrum of clinical heterogeneity has been fully characterized. A hypothesis-driven, biologically informed model could build on the clinical phenotypes to encompass the dynamic admixture of factors underlying MS disease course. In this medical hypothesis, we put forth a dynamic model of MS disease course that incorporates localization and other drivers of disability to propose a clinical manifestation framework that visualizes MS in a clinically individualized way. The topographical model encapsulates 5 factors (localization of relapses and causative lesions; relapse frequency, severity, and recovery; and progression rate), visualized utilizing dynamic 3-dimensional renderings. The central hypothesis is that, like symptom recrudescence in Uhthoff phenomenon and pseudoexacerbations, progression clinically recapitulates prior relapse symptoms and unmasks previously silent lesions, incrementally revealing underlying lesion topography. The model uses real-time simulation software to depict disease course archetypes and illuminate several well-described but poorly reconciled phenomena including the clinical/MRI paradox and prognostic significance of lesion location and burden on disease outcomes. Utilization of this model could allow for earlier and more clinically precise identification of progressive MS and predictive implications can be empirically tested. PMID:27648465

  7. Topographic amplification across a taiwanese ridge

    NASA Astrophysics Data System (ADS)

    Rault, Claire; Meunier, Patrick; Burtin, Arnaud; Marc, Odin; Weian Chao, Vvn; Wu, Yih-Min; Hovius, Niels

    2016-04-01

    A line of 6 broadband seismometers have been deployed across a ridge in the Hualien County (Eastern Taiwan) in order to study topographic amplification. Since March 2015, the network has been continuously recording waves incoming from the Taiwanese regional seismicity. The hill is well approximated by a triangular topography of 3600m in length by 900m in height. We present a preliminary analysis performed over a dozen of earthquakes selected from the Seismic Taiwanese catalog (CWBSN). We show that most of the Uphill records exhibit a systematic amplification of seismic waves (peak to peak of particle velocity) in the relevant frequency band [0.5-2Hz]. By contrast, energy within the larger frequency band [6-20Hz] reflects local site effects induced by the soil layer. We report amplification ratios ranging from ranging from 1.2 to 3 and from 1.8 to 4 for P and S waves respectively. We show that amplification processes at the top strongly depend on the parameter α defined as the angle between the azimuth of incoming wave and the azimuth of the ridge divide.

  8. A gimbal platform stabilization for topographic applications

    SciTech Connect

    Michele, Mangiameli Giuseppe, Mussumeci

    2015-03-10

    The aim of this work is the stabilization of a Gimbal platform for optical sensors acquisitions in topographic applications using mobile vehicles. The stabilization of the line of sight (LOS) consists in tracking the command velocity in presence of nonlinear noise due to the external environment. The hardware architecture is characterized by an Ardupilot platform that allows the control of both the mobile device and the Gimbal. Here we developed a new approach to stabilize the Gimbal platform, which is based on neural network. For the control system, we considered a plant that represents the transfer function of the servo system control model for an inertial stabilized Gimbal platform. The transductor used in the feed-back line control is characterized by the Rate Gyro transfer function installed onboard of Ardupilot. For the simulation and investigation of the system performance, we used the Simulink tool of Matlab. Results show that the hardware/software approach is efficient, reliable and cheap for direct photogrammetry, as well as for general purpose applications using mobile vehicles.

  9. Integrated biomechanical and topographical surface characterization (IBTSC)

    NASA Astrophysics Data System (ADS)

    Löberg, Johanna; Mattisson, Ingela; Ahlberg, Elisabet

    2014-01-01

    In an attempt to reduce the need for animal studies in dental implant applications, a new model has been developed which combines well-known surface characterization methods with theoretical biomechanical calculations. The model has been named integrated biomechanical and topographical surface characterization (IBTSC), and gives a comprehensive description of the surface topography and the ability of the surface to induce retention strength with bone. IBTSC comprises determination of 3D-surface roughness parameters by using 3D-scanning electron microscopy (3D-SEM) and atomic force microscopy (AFM), and calculation of the ability of different surface topographies to induce retention strength in bone by using the local model. Inherent in this integrated approach is the use of a length scale analysis, which makes it possible to separate different size levels of surface features. The IBTSC concept is tested on surfaces with different level of hierarchy, induced by mechanical as well as chemical treatment. Sequential treatment with oxalic and hydrofluoric acid results in precipitated nano-sized features that increase the surface roughness and the surface slope on the sub-micro and nano levels. This surface shows the highest calculated shear strength using the local model. The validity, robustness and applicability of the IBTSC concept are demonstrated and discussed.

  10. Basis and methods of NASA airborne topographic mapper lidar surveys for coastal studies

    USGS Publications Warehouse

    Brock, John C.; Wright, C. Wayne; Sallenger, Asbury H.; Krabill, William B.; Swift, Robert N.

    2002-01-01

    This paper provides an overview of the basic principles of airborne laser altimetry for surveys of coastal topography, and describes the methods used in the acquisition and processing of NASA Airborne Topographic Mapper (ATM) surveys that cover much of the conterminous US coastline. This form of remote sensing, also known as "topographic lidar", has undergone extremely rapid development during the last two decades, and has the potential to contribute within a wide range of coastal scientific investigations. Various airborne laser surveying (ALS) applications that are relevant to coastal studies are being pursued by researchers in a range of Earth science disciplines. Examples include the mapping of "bald earth" land surfaces below even moderately dense vegetation in studies of geologic framework and hydrology, and determination of the vegetation canopy structure, a key variable in mapping wildlife habitats. ALS has also proven to be an excellent method for the regional mapping of geomorphic change along barrier island beaches and other sandy coasts due to storms or long-term sedimentary processes. Coastal scientists are adopting ALS as a basic method in the study of an array of additional coastal topics. ALS can provide useful information in the analysis of shoreline change, the prediction and assessment of landslides along seacliffs and headlands, examination of subsidence causing coastal land loss, and in predicting storm surge and tsunami inundation.

  11. Topographic Phase Recovery from Stacked ERS Interferometry and a Low-Resolution Digital Elevation Model

    NASA Technical Reports Server (NTRS)

    Sandwell, David T.; Sichoix, Lydie; Frey, Herbert V. (Technical Monitor)

    2000-01-01

    A hybrid approach to topographic recovery from ERS interferometry is developed and assessed. Tropospheric/ionospheric artifacts, imprecise orbital information, and layover are key issues in recovering topography and surface deformation from repeat-pass interferometry. Previously, we developed a phase gradient approach to stacking interferograms to reduce these errors and also to reduce the short-wavelength phase noise (see Sandwell arid Price [1998] and Appendix A). Here the method is extended to use a low-resolution digital elevation model to constrain long-wavelength phase errors and an iteration scheme to minimize errors in the computation of phase gradient. We demonstrate the topographic phase recovery on 16-m postings using 25 ERS synthetic aperture radar images from an area of southern California containing 2700 m of relief. On the basis of a comparison with 81 GPS monuments, the ERS derived topography has a typical absolute accuracy of better than 10 m except in areas of layover. The resulting topographic phase enables accurate two-pass, real-time interferometry even in mountainous areas where traditional phase unwrapping schemes fail. As an example, we form a topography-free (127-m perpendicular baseline) interferogram spanning 7.5 years; fringes from two major earthquakes and a seismic slip on the San Andreas Fault are clearly isolated.

  12. Development of a grid-cell topographic surface for Okefenokee Swamp, Georgia

    USGS Publications Warehouse

    Loftin, C.S.; Rasberry, W.; Kitchens, W.M.

    2000-01-01

    The Okefenokee Swamp is a 160,000 ha freshwater wetland in Southeast Georgia, USA that developed in a landscape basin. Hydrologic variability across the swamp suggests that water-surface elevations are not uniform across the swamp. The topographic surface map discussed herein was developed to describe the swamp topography at local to landscape scales and relate the swamp peat- and sand-surface elevations to elevation above mean sea level. These data were then used to relate water-surface elevations across the swamp so that the swamp hydrologic environment could be described spatially and temporally with a spatial hydrology model. The swamp was divided into 5 sub-basins that reflect similar seasonal hydrodynamics but also indicate local conditions unique to the basins. Topographic gradient influences water-level dynamics in the western swamp (2 sub-basins), which is dominated by the Suwannee River floodplain. The eastern swamp (3 sub-basins) is terraced, and the regional hydrology is driven less by topographic gradient and more by precipitation and evapotranspiration volumes. The relatively steep gradient and berm and lake features in the western swamp's Suwannee River floodplain limit the spatial extent of the Suwannee River sill's effects, whereas system sensitivities to evapotranspiration rates are more important drivers of hydrology in the eastern swamp.

  13. Generation of topographic terrain models utilizing synthetic aperture radar and surface level data

    NASA Technical Reports Server (NTRS)

    Imhoff, Marc L. (Inventor)

    1991-01-01

    Topographical terrain models are generated by digitally delineating the boundary of the region under investigation from the data obtained from an airborne synthetic aperture radar image and surface elevation data concurrently acquired either from an airborne instrument or at ground level. A set of coregistered boundary maps thus generated are then digitally combined in three dimensional space with the acquired surface elevation data by means of image processing software stored in a digital computer. The method is particularly applicable for generating terrain models of flooded regions covered entirely or in part by foliage.

  14. Retinal topography maps in R: New tools for the analysis and visualization of spatial retinal data

    PubMed Central

    Cohn, Brian A.; Collin, Shaun P.; Wainwright, Peter C.; Schmitz, Lars

    2015-01-01

    Retinal topography maps are a widely used tool in vision science, neuroscience, and visual ecology, providing an informative visualization of the spatial distribution of cell densities across the retinal hemisphere. Here, we introduce Retina, an R package for computational mapping, inspection of topographic model fits, and generation of average maps. Functions in Retina take cell count data obtained from retinal wholemounts using stereology software. Accurate visualizations and comparisons between different eyes have been difficult in the past, because of deformation and incisions of retinal wholemounts. We account for these issues by incorporation of the R package Retistruct, which results in a retrodeformation of the wholemount into a hemispherical shape, similar to the original eyecup. The maps are generated by thin plate splines, after the data were transformed into a two-dimensional space with an azimuthal equidistant plot projection. Retina users can compute retinal topography maps independent of stereology software choice and assess model fits with a variety of diagnostic plots. Functionality of Retina also includes species average maps, an essential feature for interspecific analyses. The Retina package will facilitate rigorous comparative studies in visual ecology by providing a robust quantitative approach to generate retinal topography maps. PMID:26230981

  15. BIOACCESSIBILITY TESTS ACCURATELY ESTIMATE ...

    EPA Pesticide Factsheets

    Hazards of soil-borne Pb to wild birds may be more accurately quantified if the bioavailability of that Pb is known. To better understand the bioavailability of Pb to birds, we measured blood Pb concentrations in Japanese quail (Coturnix japonica) fed diets containing Pb-contaminated soils. Relative bioavailabilities were expressed by comparison with blood Pb concentrations in quail fed a Pb acetate reference diet. Diets containing soil from five Pb-contaminated Superfund sites had relative bioavailabilities from 33%-63%, with a mean of about 50%. Treatment of two of the soils with P significantly reduced the bioavailability of Pb. The bioaccessibility of the Pb in the test soils was then measured in six in vitro tests and regressed on bioavailability. They were: the “Relative Bioavailability Leaching Procedure” (RBALP) at pH 1.5, the same test conducted at pH 2.5, the “Ohio State University In vitro Gastrointestinal” method (OSU IVG), the “Urban Soil Bioaccessible Lead Test”, the modified “Physiologically Based Extraction Test” and the “Waterfowl Physiologically Based Extraction Test.” All regressions had positive slopes. Based on criteria of slope and coefficient of determination, the RBALP pH 2.5 and OSU IVG tests performed very well. Speciation by X-ray absorption spectroscopy demonstrated that, on average, most of the Pb in the sampled soils was sorbed to minerals (30%), bound to organic matter 24%, or present as Pb sulfate 18%. Ad

  16. Topographic Change of the Dichotomy Boundary Suggested by Crustal Inversion

    NASA Technical Reports Server (NTRS)

    Neumann, G. A.

    2004-01-01

    Linear negative gravity anomalies in Acidalia Planitia along the eastern edge of Tempe Terra and along the northern edge of Arabia Terra have been noted in Mars Global Surveyor gravity fields. Once proposed to represent buried fluvial channels, it is now believed that these gravity troughs mainly arise from partial compensation of the hemispheric dichotomy topographic scarp. A recent inversion for crustal structure finds that mantle compensation of the scarp is offset from the present-day topographic expression of the dichotomy boundary. The offset suggests that erosion or other forms of mass wasting occurred after lithosphere thickened and no longer accomodated topographic change through viscous relaxation.

  17. Hydrological Networks and Associated Topographic Variation as Templates for the Spatial Organization of Tropical Forest Vegetation

    PubMed Central

    Detto, Matteo; Muller-Landau, Helene C.; Mascaro, Joseph; Asner, Gregory P.

    2013-01-01

    An understanding of the spatial variability in tropical forest structure and biomass, and the mechanisms that underpin this variability, is critical for designing, interpreting, and upscaling field studies for regional carbon inventories. We investigated the spatial structure of tropical forest vegetation and its relationship to the hydrological network and associated topographic structure across spatial scales of 10–1000 m using high-resolution maps of LiDAR-derived mean canopy profile height (MCH) and elevation for 4930 ha of tropical forest in central Panama. MCH was strongly associated with the hydrological network: canopy height was highest in areas of positive convexity (valleys, depressions) close to channels draining 1 ha or more. Average MCH declined strongly with decreasing convexity (transition to ridges, hilltops) and increasing distance from the nearest channel. Spectral analysis, performed with wavelet decomposition, showed that the variance in MCH had fractal similarity at scales of ∼30–600 m, and was strongly associated with variation in elevation, with peak correlations at scales of ∼250 m. Whereas previous studies of topographic correlates of tropical forest structure conducted analyses at just one or a few spatial grains, our study found that correlations were strongly scale-dependent. Multi-scale analyses of correlations of MCH with slope, aspect, curvature, and Laplacian convexity found that MCH was most strongly related to convexity measured at scales of 20–300 m, a topographic variable that is a good proxy for position with respect to the hydrological network. Overall, our results support the idea that, even in these mesic forests, hydrological networks and associated topographical variation serve as templates upon which vegetation is organized over specific ranges of scales. These findings constitute an important step towards a mechanistic understanding of these patterns, and can guide upscaling and downscaling. PMID:24204610

  18. Correlation between visual function and refractive, topographic, pachymetric and aberrometric data in eyes with keratoconus

    PubMed Central

    Bayraktar Bilen, Neslihan; Hepsen, Ibrahim F.; Arce, Carlos G.

    2016-01-01

    AIM To analyze the relationship between two visual functions and refractive, topographic, pachymetric and aberrometric indicators in eyes with keratoconus. METHODS Corrected distance visual acuity (CDVA), and letter contrast sensitivity (CS) were correlated with refraction, corneal topography, pachymetry, and total corneal wavefront data prospectively in 71 eyes with keratoconus. The topographic indices assessed were simulated keratometry for the flattest and steepest meridians (SimK1 and SimK2), posterior steeper K (Ks), elevation value in best-fit sphere (BFS) maps, squared eccentricity (Є2), aspheric asymmetric index (AAI), pachymetry, thickness progression index (TPI), the amount of pachymetric decentralization (APD), and GalileiTM-keratoconus indices. RESULTS The mean CDVA (expressed as logMAR) were 0.25±0.21. The mean CS was 1.25±0.46. The spherical refraction correlated well with CDVA (r=-0.526, P<0.001). From topographic indices, SRI correlated with CS (r=-0.695), and IAI with CS (r=-0.672) (P<0.001 for all). Root mean square (RMS) was 4.3±1.81 µm, spherical aberration (SA) was -0.4±0.67 µm, vertical and horizontal coma were -2.1±1.47 and -0.4±0.72 µm. All wavefront data (except horizontal coma), AAI, Є2 and maximum BFS correlated significantly with the visual function (P≤0.001 for all). CONCLUSION In this study, CS is more affected than CDVA as a visual function. The quantity and quality of vision is significantly correlated with well-known and new topographic indices. There is not a significant correlation between visual function and pachymetric parameters. The significantly correlated indices can be used in staging keratoconus and to follow the outcome of a treatment. PMID:27588266

  19. Hydrological networks and associated topographic variation as templates for the spatial organization of tropical forest vegetation.

    PubMed

    Detto, Matteo; Muller-Landau, Helene C; Mascaro, Joseph; Asner, Gregory P

    2013-01-01

    An understanding of the spatial variability in tropical forest structure and biomass, and the mechanisms that underpin this variability, is critical for designing, interpreting, and upscaling field studies for regional carbon inventories. We investigated the spatial structure of tropical forest vegetation and its relationship to the hydrological network and associated topographic structure across spatial scales of 10-1000 m using high-resolution maps of LiDAR-derived mean canopy profile height (MCH) and elevation for 4930 ha of tropical forest in central Panama. MCH was strongly associated with the hydrological network: canopy height was highest in areas of positive convexity (valleys, depressions) close to channels draining 1 ha or more. Average MCH declined strongly with decreasing convexity (transition to ridges, hilltops) and increasing distance from the nearest channel. Spectral analysis, performed with wavelet decomposition, showed that the variance in MCH had fractal similarity at scales of ∼30-600 m, and was strongly associated with variation in elevation, with peak correlations at scales of ∼250 m. Whereas previous studies of topographic correlates of tropical forest structure conducted analyses at just one or a few spatial grains, our study found that correlations were strongly scale-dependent. Multi-scale analyses of correlations of MCH with slope, aspect, curvature, and Laplacian convexity found that MCH was most strongly related to convexity measured at scales of 20-300 m, a topographic variable that is a good proxy for position with respect to the hydrological network. Overall, our results support the idea that, even in these mesic forests, hydrological networks and associated topographical variation serve as templates upon which vegetation is organized over specific ranges of scales. These findings constitute an important step towards a mechanistic understanding of these patterns, and can guide upscaling and downscaling.

  20. MAPPING IN MICRONESIA.

    USGS Publications Warehouse

    Olsen, Randle W.; Swinnerton, J.R.

    1984-01-01

    The U. S. Geological Survey has recently completed a series of new topographic maps of Micronesia in cooperation with the Trust Territory of the Pacific Islands, the Federal agency administering the islands. Monocolor 1:10,000-scale manuscripts were compiled, from which 1:25,000-scale metric quadrangles were derived with symbology consistent with USGS quadrangle mapping. The publication of these new maps coincides with the impending political changes resulting from self-determination referendums held in Micronesia. Local sources have helped considerably with field logistics and resolution of geographic name controversies. Technical aspects of this project included development of tropical feature symbology, location of cadastral subdivisions and associated boundaries and mapping of many outlying coral reefs.

  1. Leveraging LIDAR-derived Point Clouds for Topographic Characterization

    NASA Astrophysics Data System (ADS)

    Velasquez, C.; Glenn, N. F.; Ames, D. P.

    2010-12-01

    Velásquez, C. F., Glenn, N. F., Ames, D. P. Acquisition of accurate x, y and z coordinates of terrain information throughout large geographic areas is possible with Light Detection and Ranging (LiDAR) technology. The mass of points (or point cloud) remotely acquired with airborne LiDAR sensors, for instance, are used for the creation of quality digital models of terrain. Extraction of hydrological features such as channel networks from digital terrain models is a common task. This task is generally conducted by means of implementing software tools that analyze raster structures for representation of terrain surfaces. Exploring the feasibility of directly and effectively extracting land cover features from a point cloud deserves due attention given both the proliferation of LiDAR data availability and the potential for the information to overcome some disadvantages that are intrinsic to the raster structure. Pursuing an alternative mode to leveraging LiDAR data for hydrologic applications is, therefore, the subject motivating the current research. A methodology for extraction of concave-shaped terrain surfaces is proposed. These features, relevant to hydrological applications, are extracted by means of implementing a convolution operation that is conducted on the x, y, and z coordinates of the point cloud and with an adapted construct for a zero-sum kernel function. The mass of points that are topographically lower of what is referred to as a zero-crossing level appear to reasonably well delineate concave-shaped landforms. The proposed method is, therefore, of merit to further investigation.

  2. Topographic and Stochastic Influences on Pahoehoe Lava Lobe Emplacement

    NASA Technical Reports Server (NTRS)

    Hamilton, Christopher W.; Glaze, Lori S.; James, Mike R.; Baloga, Stephen M.

    2013-01-01

    A detailed understanding of pahoehoe emplacement is necessary for developing accurate models of flow field development, assessing hazards, and interpreting the significance of lava morphology on Earth and other planetary surfaces. Active pahoehoe lobes on Kilauea Volcano, Hawaii, were examined on 21-26 February 2006 using oblique time-series stereo-photogrammetry and differential global positioning system (DGPS) measurements. During this time, the local discharge rate for peripheral lava lobes was generally constant at 0.0061 +/- 0.0019 m3/s, but the areal coverage rate of the lobes exhibited a periodic increase every 4.13 +/- 0.64 minutes. This periodicity is attributed to the time required for the pressure within the liquid lava core to exceed the cooling induced strength of its margins. The pahoehoe flow advanced through a series of down slope and cross-slope breakouts, which began as approximately 0.2 m-thick units (i.e., toes) that coalesced and inflated to become approximately meter-thick lobes. The lobes were thickest above the lowest points of the initial topography and above shallow to reverse facing slopes, defined relative to the local flow direction. The flow path was typically controlled by high-standing topography, with the zone directly adjacent to the final lobe margin having an average relief that was a few centimeters higher than the lava inundated region. This suggests that toe-scale topography can, at least temporarily, exert strong controls on pahoehoe flow paths by impeding the lateral spreading of the lobe. Observed cycles of enhanced areal spreading and inflated lobe morphology are also explored using a model that considers the statistical likelihood of sequential breakouts from active flow margins and the effects of topographic barriers.

  3. The periepiglottic space: topographic relations and histological organisation.

    PubMed Central

    Reidenbach, M M

    1996-01-01

    Important aspects of histological organisation and topographic relations of the pre-epiglottic space are not fully understood. This region was therefore reinvestigated in plastinated serial sections of 19 human adult specimens. The cranial part of the pre-epiglottic space is homogenously filled with adipose tissue and extends around the epiglottis in a horseshoe fashion. Therefore, the term periepiglottic space (PES) is a more accurate description of this region. The cranial border of the PES is constituted by the hyoepiglottic membrane, which extends between the epiglottis and the tongue, and the hyoepiglottic ligament. The ligament consists of a cranial fibre layer anchored within the lingual muscles, and a caudal layer attached to the hyoid bone. Anterior to the lingual surface of the epiglottis, both fibre layers become apposed to form a dense collagenous mass, which may stabilise the epiglottis during deglutition. Contractions of the infrahyoid muscles will be transmitted to the thyrohyoid membrane anterior to the PES by numerous collagenous septa which originate from the membrane and radiate into the muscles. In contrast, the pre-epiglottic adipose tissue is not connected to the thyrohyoid membrane. The caudal part of the PES is subdivided by two paramedian sagittal collagenous septa. They include a medial compartment bordered by the epiglottis posteriorly and the thyroepiglottic ligament inferiorly. The two lateral subdivisions of the PES extend between the glands of the vestibular folds and towards the aryepiglottic folds, but a distinct confining collagenous layer is absent there. Posterolaterally, the PES is separated from the paraglottic space by the thyroarytenoid muscle and by a cranial extension of the fibrous sheet of the muscle. This collagenous tissue is often split into several layers and displays gaps which may facilitate the spread of malignancies. Images Fig. 2 Fig. 3 Fig. 4 Fig. 5 Fig. 6 Fig. 7 Fig. 8 PMID:8655405

  4. Accurate spectral color measurements

    NASA Astrophysics Data System (ADS)

    Hiltunen, Jouni; Jaeaeskelaeinen, Timo; Parkkinen, Jussi P. S.

    1999-08-01

    Surface color measurement is of importance in a very wide range of industrial applications including paint, paper, printing, photography, textiles, plastics and so on. For a demanding color measurements spectral approach is often needed. One can measure a color spectrum with a spectrophotometer using calibrated standard samples as a reference. Because it is impossible to define absolute color values of a sample, we always work with approximations. The human eye can perceive color difference as small as 0.5 CIELAB units and thus distinguish millions of colors. This 0.5 unit difference should be a goal for the precise color measurements. This limit is not a problem if we only want to measure the color difference of two samples, but if we want to know in a same time exact color coordinate values accuracy problems arise. The values of two instruments can be astonishingly different. The accuracy of the instrument used in color measurement may depend on various errors such as photometric non-linearity, wavelength error, integrating sphere dark level error, integrating sphere error in both specular included and specular excluded modes. Thus the correction formulas should be used to get more accurate results. Another question is how many channels i.e. wavelengths we are using to measure a spectrum. It is obvious that the sampling interval should be short to get more precise results. Furthermore, the result we get is always compromise of measuring time, conditions and cost. Sometimes we have to use portable syste or the shape and the size of samples makes it impossible to use sensitive equipment. In this study a small set of calibrated color tiles measured with the Perkin Elmer Lamda 18 and the Minolta CM-2002 spectrophotometers are compared. In the paper we explain the typical error sources of spectral color measurements, and show which are the accuracy demands a good colorimeter should have.

  5. Landsliding, topographic variables and location of cultural terraces in Slovenia

    NASA Astrophysics Data System (ADS)

    Komac, Blaž; Zorn, Matija

    2015-04-01

    For a large number of people living in hilly regions of Slovenia cultural terraces are important landscape elements. We know from previous studies that as many as half of vineyard terraces are built in areas which are highly susceptible to landslides, and a quarter in low landslide susceptibility areas. The contribution will present links between landslide susceptibility in terraced areas in Slovenia. Landslides are frequent element of cultural terraces-landscape. In Slovenia they are frequent in hilly and mountainous regions. The position of landslide areas is strongly influenced by the topography and thus indirectly by the construction of cultural terraces. They trigger during and after terraces construction when the drainage system is altered. Thus, agricultural activity leads to instability of slopes, and increases the production costs. Links between landsliding (Zorn and Komac 2004; 2008; 2009) and cultural terraces were determined using the geographic information systems. For the territory of Slovenia, we have already created landslide susceptibility map (Zorn and Komac 2004; 2008), while here we determined the correlation between landslides, topographic variables and location of cultural terraces. To achieve this aim, all areas of cultural terraces in Slovenia were digitized at the scale of 1:10,000. References Zorn, M., Komac B. 2004: Deterministic modeling of landslide and rockfall risk. Acta geographica Slovenica 44 (2), pp. 53-10. DOI: 10.3986/AGS44203 Zorn, M., Komac, B. 2008: Zemeljski plazovi v Sloveniji (Landslides in Slovenia). Georitem 8. Ljubljana: ZRC Publishing. Zorn, M., Komac, B. 2009: The importance of landsliding in a flysch geomorphic system: The example of the Gori\\vska brda Hills (W Slovenia). Zeitschrift für Geomorphologie N. F., Suppl. 56 (3), pp. 53-79. DOI: 10.1127/0372-8854/2012/S-00104

  6. Topographical estimation of visual population receptive fields by FMRI.

    PubMed

    Lee, Sangkyun; Papanikolaou, Amalia; Keliris, Georgios A; Smirnakis, Stelios M

    2015-02-03

    Visual cortex is retinotopically organized so that neighboring populations of cells map to neighboring parts of the visual field. Functional magnetic resonance imaging allows us to estimate voxel-based population receptive fields (pRF), i.e., the part of the visual field that activates the cells within each voxel. Prior, direct, pRF estimation methods(1) suffer from certain limitations: 1) the pRF model is chosen a-priori and may not fully capture the actual pRF shape, and 2) pRF centers are prone to mislocalization near the border of the stimulus space. Here a new topographical pRF estimation method(2) is proposed that largely circumvents these limitations. A linear model is used to predict the Blood Oxygen Level-Dependent (BOLD) signal by convolving the linear response of the pRF to the visual stimulus with the canonical hemodynamic response function. PRF topography is represented as a weight vector whose components represent the strength of the aggregate response of voxel neurons to stimuli presented at different visual field locations. The resulting linear equations can be solved for the pRF weight vector using ridge regression(3), yielding the pRF topography. A pRF model that is matched to the estimated topography can then be chosen post-hoc, thereby improving the estimates of pRF parameters such as pRF-center location, pRF orientation, size, etc. Having the pRF topography available also allows the visual verification of pRF parameter estimates allowing the extraction of various pRF properties without having to make a-priori assumptions about the pRF structure. This approach promises to be particularly useful for investigating the pRF organization of patients with disorders of the visual system.

  7. 12. Historic American Buildings Survey Topographic Survey of Cosmos Club, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    12. Historic American Buildings Survey Topographic Survey of Cosmos Club, 1950, by Bernard Locroft, Civil Engineer (Showing Grounds as They Were at End of Sumner Welles Era) SITE PLAN - Townsend House, 2121 Massachusetts Avenue Northwest, Washington, District o