Science.gov

Sample records for acellular simulated body

  1. Electronic Falling Body Simulator

    ERIC Educational Resources Information Center

    Goodman, John M.

    1975-01-01

    Describes an analog electronic simulator for the motion of an object projected horizontally in a vertical acceleration field. The device features adjustable values for the horizontal speeds and "gravity." Trajectories are displayed on an oscilloscope. (Author/CP)

  2. Gravitational N-Body Simulations

    NASA Astrophysics Data System (ADS)

    Aarseth, Sverre J.

    2010-01-01

    Preface; 1. The N-body problem; 2. Predictor-corrector methods; 3. Neighbour treatments; 4. Two-body regularization; 5. Multiple regularization; 6. Tree codes; 7. Program organization; 8. Initial setup; 9. Decision-making; 10. Neighbour schemes; 11. Two-body algorithms; 12. Chain procedures; 13. Accuracy and performance; 14. Practical aspects; 15. Star clusters; 16. Galaxies; 17. Planetary systems; 18. Small-N experiments; Appendix A. Global regularization algorithms; Appendix B. Chain algorithms; Appendix C. High-order systems; Appendix D. Practical algorithms; Appendix E. KS procedures with GRAPE; Appendix F. Alternative simulation method; Appendix G. Table of symbols; Appendix H. Hermite integration method; References; Index.

  3. Gravitational N-Body Simulations

    NASA Astrophysics Data System (ADS)

    Aarseth, Sverre J.

    2003-10-01

    Preface; 1. The N-body problem; 2. Predictor-corrector methods; 3. Neighbour treatments; 4. Two-body regularization; 5. Multiple regularization; 6. Tree codes; 7. Program organization; 8. Initial setup; 9. Decision-making; 10. Neighbour schemes; 11. Two-body algorithms; 12. Chain procedures; 13. Accuracy and performance; 14. Practical aspects; 15. Star clusters; 16. Galaxies; 17. Planetary systems; 18. Small-N experiments; Appendix A. Global regularization algorithms; Appendix B. Chain algorithms; Appendix C. High-order systems; Appendix D. Practical algorithms; Appendix E. KS procedures with GRAPE; Appendix F. Alternative simulation method; Appendix G. Table of symbols; Appendix H. Hermite integration method; References; Index.

  4. Fluid simulation with articulated bodies.

    PubMed

    Kwatra, Nipun; Wojtan, Chris; Carlson, Mark; Essa, Irfan; Mucha, Peter J; Turk, Greg

    2010-01-01

    We present an algorithm for creating realistic animations of characters that are swimming through fluids. Our approach combines dynamic simulation with data-driven kinematic motions (motion capture data) to produce realistic animation in a fluid. The interaction of the articulated body with the fluid is performed by incorporating joint constraints with rigid animation and by extending a solid/fluid coupling method to handle articulated chains. Our solver takes as input the current state of the simulation and calculates the angular and linear accelerations of the connected bodies needed to match a particular motion sequence for the articulated body. These accelerations are used to estimate the forces and torques that are then applied to each joint. Based on this approach, we demonstrate simulated swimming results for a variety of different strokes, including crawl, backstroke, breaststroke, and butterfly. The ability to have articulated bodies interact with fluids also allows us to generate simulations of simple water creatures that are driven by simple controllers. PMID:19910662

  5. Cosmological N-body Simulation

    NASA Astrophysics Data System (ADS)

    Lake, George

    1994-05-01

    .90ex> }}} The ``N'' in N-body calculations has doubled every year for the last two decades. To continue this trend, the UW N-body group is working on algorithms for the fast evaluation of gravitational forces on parallel computers and establishing rigorous standards for the computations. In these algorithms, the computational cost per time step is ~ 10(3) pairwise forces per particle. A new adaptive time integrator enables us to perform high quality integrations that are fully temporally and spatially adaptive. SPH--smoothed particle hydrodynamics will be added to simulate the effects of dissipating gas and magnetic fields. The importance of these calculations is two-fold. First, they determine the nonlinear consequences of theories for the structure of the Universe. Second, they are essential for the interpretation of observations. Every galaxy has six coordinates of velocity and position. Observations determine two sky coordinates and a line of sight velocity that bundles universal expansion (distance) together with a random velocity created by the mass distribution. Simulations are needed to determine the underlying structure and masses. The importance of simulations has moved from ex post facto explanation to an integral part of planning large observational programs. I will show why high quality simulations with ``large N'' are essential to accomplish our scientific goals. This year, our simulations have N >~ 10(7) . This is sufficient to tackle some niche problems, but well short of our 5 year goal--simulating The Sloan Digital Sky Survey using a few Billion particles (a Teraflop-year simulation). Extrapolating past trends, we would have to ``wait'' 7 years for this hundred-fold improvement. Like past gains, significant changes in the computational methods are required for these advances. I will describe new algorithms, algorithmic hacks and a dedicated computer to perform Billion particle simulations. Finally, I will describe research that can be enabled by

  6. Comparison of toxicities of acellular pertussis vaccine with whole cell pertussis vaccine in experimental animals.

    PubMed

    Sato, Y; Sato, H

    1991-01-01

    There is no suitable animal model for pertussis encephalopathy in humans. In this study, we have compared the toxicity of acellular pertussis vaccine with whole cell pertussis vaccine in mice or guinea pigs. Two lots of acellular and two lots of whole cell vaccine produced in different countries were assayed in the test. 1. There was no statistical difference in mouse protective potency between these acellular or whole cell pertussis vaccines. 2. There were no differences in chemical ingredients between acellular and whole cell pertussis vaccines except for protein nitrogen content. The protein nitrogen content of whole cell vaccine was at least three times higher than that of the acellular product. 3. Anti-PT antibody productivity of the acellular vaccine was higher than that of the whole cell vaccine. 4. Anti-agglutinogen antibody productivity of the whole cell vaccine was higher than that of the acellular vaccine. 5. There was no pyrogenic activity with the acellular vaccine, but high pyrogenicity was seen with whole cell vaccine. 6. There was high body-weight decreasing toxicity in mice and guinea pigs by the whole cell vaccine. 7. The mice died when they received whole cell pertussis vaccine iv, but no deaths occurred in the mice which received acellular pertussis vaccine. PMID:1778317

  7. Simulation of Rings about Ellipsoidal Bodies

    NASA Astrophysics Data System (ADS)

    Gupta, Akash; Nadkarni-Ghosh, Sharvari; Sharma, Ishan

    2016-10-01

    Recent discovery of rings around Chariklo, a centaur orbiting the Sun (F. Braga-Ribas et al., 2014) and speculations of rings around minor planet, Chiron (Ortiz et al., 2015), Saturn's satellites, Rhea (Jones et al., 2008; Schenk et al., 2011), Iapetus (Ip, 2006) or exoplanets, suggest that rings about non-spherical bodies is perhaps a more general phenomenon than anticipated. As a first step towards understanding such systems, we examine the dynamical behavior of rings around similar bodies using N-body simulations. Our code employs the `local simulation method' (Wisdom & Tremaine, 1988; Salo, 1995) and accounts for particle interactions via collisions using Discrete Element Method (Cundall & Strack, 1978; Bhateja et al., 2016) and mutual gravitation. The central body has been modeled as an axisymmetric ellipsoid characterized by its axis ratio, or defined via characteristic frequencies (circular, vertical and epicyclic frequency) representing the gravitational field of an axisymmetric body. We vary the central body's characterizing parameter and observe the change in various ring properties like the granular temperature, impact frequency, radial width and vertical thickness. We also look into the effect on ring properties upon variation in the size of the central body-ring system. Further, we investigate the role of characteristic frequencies in dictating the ring dynamics, and how this could help in qualitatively estimating the ring dynamics about any arbitrary central body with symmetry about the equatorial plane and the axis normal to it.

  8. Laboratory Simulation Of Upper-Body Work

    NASA Technical Reports Server (NTRS)

    Lantz, R.; Vykukal, H.; Webbon, B.

    1992-01-01

    Paper describes exercise method evoking muscular, cardiovascular, respiratory, and thermoregulatory responses typical of activity involving upper body, to simulate effects of working in zero gravity in space suit. Used in research on thermoregulatory subsystem of advanced portable life-support system for space suit. Discusses requirements for simulation of zero-gravity work in space suit and describes evolution of method through three versions. In preferred version, one performs arm-crank ergometry with gimbaled body-support mechanism that react forces at feet.

  9. Bodies Falling with Air Resistance: Computer Simulation.

    ERIC Educational Resources Information Center

    Vest, Floyd

    1982-01-01

    Two models are presented. The first assumes that air resistance is proportional to the velocity of the falling body. The second assumes that air resistance is proportional to the square of the velocity. A program written in BASIC that simulates the second model is presented. (MP)

  10. A simulation method for the fruitage body

    NASA Astrophysics Data System (ADS)

    Lu, Ling; Song, Weng-lin; Wang, Lei

    2009-07-01

    An effective visual modeling for creating the fruitage body has been present. According to the geometry shape character of fruitage, we build up its face model base on ellipsoid deformation. The face model is relation with radius. We consider different radius become a face in the fruitage, and uses same method to simulate the shape of fruitage inside. The body model is formed by combine face model and radius direction. Our method can simulate virtual inter and outer structure for fruitage body. The method decreases a lot of data and increases display speed. Another, the texture model of fruitage is defined by sum of different base function. This kind of method is simple and speed. We show the feasibility of our method by creating a winter-jujube and an apricot. They include exocorp, mesocorp and endocarp. It is useful that develop virtual plant.

  11. Laboratory simulation of cratering on small bodies

    NASA Technical Reports Server (NTRS)

    Schmidt, Robert M.

    1991-01-01

    A new technique using external pressure was developed to simulate the lithostatic pressure due to self-gravity of small bodies. A 13-in. diameter cylindrical test chamber with L/D of 1 was fabricated to accommodate firing explosive charges with gas overpressures of up to 6000 psi. The chamber was hydrotested to 9000 psi. The method allows much larger scale factors that can be obtained with existing centrifuges and has the correct spherical geometry of self gravity. A simulant for jointed rock to be used in this fixture was developed using weakly cemented basalt. Various strength/pressure scaling theories can now be examined and tested.

  12. Robust three-body water simulation model

    NASA Astrophysics Data System (ADS)

    Tainter, C. J.; Pieniazek, P. A.; Lin, Y.-S.; Skinner, J. L.

    2011-05-01

    The most common potentials used in classical simulations of liquid water assume a pairwise additive form. Although these models have been very successful in reproducing many properties of liquid water at ambient conditions, none is able to describe accurately water throughout its complicated phase diagram. The primary reason for this is the neglect of many-body interactions. To this end, a simulation model with explicit three-body interactions was introduced recently [R. Kumar and J. L. Skinner, J. Phys. Chem. B 112, 8311 (2008), 10.1021/jp8009468]. This model was parameterized to fit the experimental O-O radial distribution function and diffusion constant. Herein we reparameterize the model, fitting to a wider range of experimental properties (diffusion constant, rotational correlation time, density for the liquid, liquid/vapor surface tension, melting point, and the ice Ih density). The robustness of the model is then verified by comparing simulation to experiment for a number of other quantities (enthalpy of vaporization, dielectric constant, Debye relaxation time, temperature of maximum density, and the temperature-dependent second and third virial coefficients), with good agreement.

  13. N-body simulations of star clusters

    NASA Astrophysics Data System (ADS)

    Engle, Kimberly Anne

    1999-10-01

    We investigate the structure and evolution of underfilling (i.e. non-Roche-lobe-filling) King model globular star clusters using N-body simulations. We model clusters with various underfilling factors and mass distributions to determine their evolutionary tracks and lifetimes. These models include a self-consistent galactic tidal field, mass loss due to stellar evolution, ejection, and evaporation, and binary evolution. We find that a star cluster that initially does not fill its Roche lobe can live many times longer than one that does initially fill its Roche lobe. After a few relaxation times, the cluster expands to fill its Roche lobe. We also find that the choice of initial mass function significantly affects the lifetime of the cluster. These simulations were performed on the GRAPE-4 (GRAvity PipE) special-purpose hardware with the stellar dynamics package ``Starlab.'' The GRAPE-4 system is a massively-parallel computer designed to calculate the force (and its first time derivative) due to N particles. Starlab's integrator ``kira'' employs a 4th- order Hermite scheme with hierarchical (block) time steps to evolve the stellar system. We discuss, in some detail, the design of the GRAPE-4 system and the manner in which the Hermite integration scheme with block time steps is implemented in the hardware.

  14. Acellular pertussis vaccines in China.

    PubMed

    Wang, Lichan; Lei, Dianliang; Zhang, Shumin

    2012-11-26

    In China, whole-cell pertussis (Pw) vaccines were produced in the early 1960s and acellular pertussis (Pa) vaccines were introduced in 1995. Pa vaccines have now almost completely replaced Pw vaccines in the national immunization program. To strengthen the regulation of vaccines used in China, a vaccine lot release system was established in 2001 and Pa vaccines have been included in the system since 2006. This paper mainly described the current status of production and the quality control measures in place for Pa vaccines; and analyses quality control test data accumulated between 2006 and 2010.

  15. Realistic Simulation for Body Area and Body-To-Body Networks.

    PubMed

    Alam, Muhammad Mahtab; Ben Hamida, Elyes; Ben Arbia, Dhafer; Maman, Mickael; Mani, Francesco; Denis, Benoit; D'Errico, Raffaele

    2016-01-01

    In this paper, we present an accurate and realistic simulation for body area networks (BAN) and body-to-body networks (BBN) using deterministic and semi-deterministic approaches. First, in the semi-deterministic approach, a real-time measurement campaign is performed, which is further characterized through statistical analysis. It is able to generate link-correlated and time-varying realistic traces (i.e., with consistent mobility patterns) for on-body and body-to-body shadowing and fading, including body orientations and rotations, by means of stochastic channel models. The full deterministic approach is particularly targeted to enhance IEEE 802.15.6 proposed channel models by introducing space and time variations (i.e., dynamic distances) through biomechanical modeling. In addition, it helps to accurately model the radio link by identifying the link types and corresponding path loss factors for line of sight (LOS) and non-line of sight (NLOS). This approach is particularly important for links that vary over time due to mobility. It is also important to add that the communication and protocol stack, including the physical (PHY), medium access control (MAC) and networking models, is developed for BAN and BBN, and the IEEE 802.15.6 compliance standard is provided as a benchmark for future research works of the community. Finally, the two approaches are compared in terms of the successful packet delivery ratio, packet delay and energy efficiency. The results show that the semi-deterministic approach is the best option; however, for the diversity of the mobility patterns and scenarios applicable, biomechanical modeling and the deterministic approach are better choices. PMID:27104537

  16. Realistic Simulation for Body Area and Body-To-Body Networks

    PubMed Central

    Alam, Muhammad Mahtab; Ben Hamida, Elyes; Ben Arbia, Dhafer; Maman, Mickael; Mani, Francesco; Denis, Benoit; D’Errico, Raffaele

    2016-01-01

    In this paper, we present an accurate and realistic simulation for body area networks (BAN) and body-to-body networks (BBN) using deterministic and semi-deterministic approaches. First, in the semi-deterministic approach, a real-time measurement campaign is performed, which is further characterized through statistical analysis. It is able to generate link-correlated and time-varying realistic traces (i.e., with consistent mobility patterns) for on-body and body-to-body shadowing and fading, including body orientations and rotations, by means of stochastic channel models. The full deterministic approach is particularly targeted to enhance IEEE 802.15.6 proposed channel models by introducing space and time variations (i.e., dynamic distances) through biomechanical modeling. In addition, it helps to accurately model the radio link by identifying the link types and corresponding path loss factors for line of sight (LOS) and non-line of sight (NLOS). This approach is particularly important for links that vary over time due to mobility. It is also important to add that the communication and protocol stack, including the physical (PHY), medium access control (MAC) and networking models, is developed for BAN and BBN, and the IEEE 802.15.6 compliance standard is provided as a benchmark for future research works of the community. Finally, the two approaches are compared in terms of the successful packet delivery ratio, packet delay and energy efficiency. The results show that the semi-deterministic approach is the best option; however, for the diversity of the mobility patterns and scenarios applicable, biomechanical modeling and the deterministic approach are better choices. PMID:27104537

  17. N-body simulations of γ gravity

    NASA Astrophysics Data System (ADS)

    Vargas dos Santos, Marcelo; Winther, Hans A.; Mota, David F.; Waga, Ioav

    2016-03-01

    We have investigated structure formation in the γ gravity f(R) model with N-body simulations. The γ gravity model is a proposal which, unlike other viable f(R) models, not only changes the gravitational dynamics, but can in principle also have signatures at the background level that are different from those obtained in ΛCDM (Cosmological constant, Cold Dark Matter). The aim of this paper is to study the nonlinear regime of the model in the case where, at late times, the background differs from ΛCDM. We quantify the signatures produced on the power spectrum, the halo mass function, and the density and velocity profiles. To appreciate the features of the model, we have compared it to ΛCDM and the Hu-Sawicki f(R) models. For the considered set of parameters we find that the screening mechanism is ineffective, which gives rise to deviations in the halo mass function that disagree with observations. This does not rule out the model per se, but requires choices of parameters such that | fR0 | is much smaller, which would imply that its cosmic expansion history cannot be distinguished from ΛCDM at the background level.

  18. GalevNB: GALEV for N-body simulations

    NASA Astrophysics Data System (ADS)

    Pang, Xiaoying; Olczak, Christoph; Spurzem, Rainer

    2016-02-01

    We report on GalevNB (Galev for N-body simulations), an integrated software solution that provides N-body users direct access to the software package GALEV (GALaxy EVolutionary synthesis models). GalevNB is developed for the purpose of a direct comparison between N-body simulations and observations. It converts the fundamental stellar properties of N-body simulations, i.e., stellar mass, temperature, stellar luminosity and metallicity, into observational magnitudes for a variety of filters of widely used instruments/telescopes (HST, ESO, SDSS, 2MASS), and into spectra that span from far-UV (90 Å) to near-IR (160 μm).

  19. Recent advances in acellular regenerative tissue scaffolds.

    PubMed

    Protzman, Nicole M; Brigido, Stephen A

    2015-01-01

    The management of chronic wounds is a considerable challenge for foot and ankle surgeons. The well-established tenets of adequate vascular supply, debridement with eradication of infection, and offloading must be employed in the management of all extremity wounds. Regenerative scaffolds are a viable means of reestablishing a favorable wound environment. The matrix facilitates cell migration, chemoattraction, angiogenesis, wound bed granulation, and expedited wound closure. Although studies have demonstrated success with acellular matrices, a multimodal approach should always be employed to improve healing success. Negative pressure wound therapy, compression, offloading, and antibiotics are advocated to improve outcomes. Acellular graft selection requires a multifactorial analysis, taking into consideration the specific patient and wound characteristics as well as the differences between acellular matrices. Patient age, comorbidities, activity level, and ability to comply with protocol as well as wound etiology, duration, depth, surface area, exudate, bacterial burden, location, vascular status, ischemic status, and presentation are all critical components. To effectively choose a matrix, the clinician must have a comprehensive understanding of the products available and the data validating their use. The mechanisms by which the acellular matrix accelerates wound healing and increases the likelihood of wound healing continue to be investigated. However, it is clear that these acellular biologic tissue scaffolds are incorporating into the host tissue, with resultant revascularization and cellular repopulation. Moving forward, additional investigations examining the effectiveness of acellular biologic tissue scaffolds to improve healing in complex, nondiabetic wounds are warranted.

  20. Whole body measurement systems. [for weightlessness simulation

    NASA Technical Reports Server (NTRS)

    Ogle, J. S. (Inventor)

    1973-01-01

    A system for measuring the volume and volume variations of a human body under zero gravity conditions is disclosed. An enclosed chamber having a defined volume and arranged for receiving a human body is provided with means for infrasonically varying the volume of the chamber. The changes in volume produce resultant changes in pressure, and under substantially isentropic conditions, an isentropic relationship permits a determination of gas volume which, in turn, when related to total chamber volume permits a determination of the body volume. By comparison techniques, volume changes of a human independent of gravity conditions can be determined.

  1. Comparing ballistic wounds with experiments on body simulator.

    PubMed

    Bresson, F; Franck, O

    2010-05-20

    This paper demonstrates how ballistic experiments on body simulator can bring a key information in the forensic science field. In the investigated case, a hunter was shot by accident in the back. Two hunters were suspected of having inadvertently shot towards the victim. The deadly bullet left the body and cannot be found on the scene neither in the body. The only way to discriminate the two options was to perform ballistic tests in body simulators. Even though the knowledge about body simulators is not enough advanced yet to expect accurate quantitative results, it was supposed to fully discriminate the two investigated cases as its respective impact energy are highly different (respectively 1200J and 2400J). For each investigated possibility, bullet's expansion state and body wounds were simulated. Bullet impact characteristics were determined by measuring the muzzle velocity, compute the impact velocity in the considered range (the position of each hunter is accurately known). Reloading cartridges allowed to reproduce accuretaly the corresponding velocity. The body was simulated by 3 different means in order to explore the accuracy of the simulation process. We demonstrated that the reported case is situated in a velocity/energy range in which body simulators do not need to be particularly accurate to reproduce the bullet expansion/non-expansion state. It furthermore demonstrated that only one case is compatible with the ballistic wounds of the victim. In the other case, the bullet's expansion would lead to a completely different wound shape. PMID:20074882

  2. A General Simulation Method for Multiple Bodies in Proximate Flight

    NASA Technical Reports Server (NTRS)

    Meakin, Robert L.

    2003-01-01

    Methods of unsteady aerodynamic simulation for an arbitrary number of independent bodies flying in close proximity are considered. A novel method to efficiently detect collision contact points is described. A method to compute body trajectories in response to aerodynamic loads, applied loads, and inter-body collisions is also given. The physical correctness of the methods are verified by comparison to a set of analytic solutions. The methods, combined with a Navier-Stokes solver, are used to demonstrate the possibility of predicting the unsteady aerodynamics and flight trajectories of moving bodies that involve rigid-body collisions.

  3. N-body simulations of disks. [of stellar systems

    NASA Technical Reports Server (NTRS)

    Hohl, F.

    1975-01-01

    The methods used in large-scale n-body simulations are discussed. However, the present review concentrates on results already obtained in n-body simulations using systems containing up to 200,000 simulation stars. Results are presented which show that the stability criterion developed for flattened systems applies only to truly axisymmetric instabilities. Purely stellar disks acquire rather large velocity dispersions, generally two or more times the velocity dispersion required by Toomre (1964) for axisymmetric stability. In computer simulations, the bar-forming instability can be prevented only by comparatively large velocity dispersions. However, simulations including the effects of the galactic halo and core as a fixed background field show that bar formation can be prevented for fixed halo components as large or larger than the self-consistent disk component. Experiments performed to determine the collisional relaxation time for large-scale gravitational n-body calculations show that these models are indeed 'collisionless'.

  4. Computer simulation of multigrid body dynamics and control

    NASA Technical Reports Server (NTRS)

    Swaminadham, M.; Moon, Young I.; Venkayya, V. B.

    1990-01-01

    The objective is to set up and analyze benchmark problems on multibody dynamics and to verify the predictions of two multibody computer simulation codes. TREETOPS and DISCOS have been used to run three example problems - one degree-of-freedom spring mass dashpot system, an inverted pendulum system, and a triple pendulum. To study the dynamics and control interaction, an inverted planar pendulum with an external body force and a torsional control spring was modeled as a hinge connected two-rigid body system. TREETOPS and DISCOS affected the time history simulation of this problem. System state space variables and their time derivatives from two simulation codes were compared.

  5. In vitro assessment of biodurability: acellular systems.

    PubMed Central

    de Meringo, A; Morscheidt, C; Thélohan, S; Tiesler, H

    1994-01-01

    The assessment of biodurability of man-made vitreous fibers is essential to the limitation of health hazards associated with human exposure to environments in which respirable fibers are present. In vitro acellular systems provide effective test methods of measuring fiber solubility provided care is taken to select the most suitable solvent and test conditions for the specific fiber type and dimension. PMID:7882955

  6. Human acellular dermal wound matrix: evidence and experience.

    PubMed

    Kirsner, Robert S; Bohn, Greg; Driver, Vickie R; Mills, Joseph L; Nanney, Lillian B; Williams, Marie L; Wu, Stephanie C

    2015-12-01

    A chronic wound fails to complete an orderly and timely reparative process and places patients at increased risk for wound complications that negatively impact quality of life and require greater health care expenditure. The role of extracellular matrix (ECM) is critical in normal and chronic wound repair. Not only is ECM the largest component of the dermal skin layer, but also ECM proteins provide structure and cell signalling that are necessary for successful tissue repair. Chronic wounds are characterised by their inflammatory and proteolytic environment, which degrades the ECM. Human acellular dermal matrices, which provide an ECM scaffold, therefore, are being used to treat chronic wounds. The ideal human acellular dermal wound matrix (HADWM) would support regenerative healing, providing a structure that could be repopulated by the body's cells. Experienced wound care investigators and clinicians discussed the function of ECM, the evidence related to a specific HADWM (Graftjacket(®) regenerative tissue matrix, Wright Medical Technology, Inc., licensed by KCI USA, Inc., San Antonio, TX), and their clinical experience with this scaffold. This article distills these discussions into an evidence-based and practical overview for treating chronic lower extremity wounds with this HADWM. PMID:24283346

  7. Human acellular dermal wound matrix: evidence and experience.

    PubMed

    Kirsner, Robert S; Bohn, Greg; Driver, Vickie R; Mills, Joseph L; Nanney, Lillian B; Williams, Marie L; Wu, Stephanie C

    2015-12-01

    A chronic wound fails to complete an orderly and timely reparative process and places patients at increased risk for wound complications that negatively impact quality of life and require greater health care expenditure. The role of extracellular matrix (ECM) is critical in normal and chronic wound repair. Not only is ECM the largest component of the dermal skin layer, but also ECM proteins provide structure and cell signalling that are necessary for successful tissue repair. Chronic wounds are characterised by their inflammatory and proteolytic environment, which degrades the ECM. Human acellular dermal matrices, which provide an ECM scaffold, therefore, are being used to treat chronic wounds. The ideal human acellular dermal wound matrix (HADWM) would support regenerative healing, providing a structure that could be repopulated by the body's cells. Experienced wound care investigators and clinicians discussed the function of ECM, the evidence related to a specific HADWM (Graftjacket(®) regenerative tissue matrix, Wright Medical Technology, Inc., licensed by KCI USA, Inc., San Antonio, TX), and their clinical experience with this scaffold. This article distills these discussions into an evidence-based and practical overview for treating chronic lower extremity wounds with this HADWM.

  8. Whole-body mathematical model for simulating intracranial pressure dynamics

    NASA Technical Reports Server (NTRS)

    Lakin, William D. (Inventor); Penar, Paul L. (Inventor); Stevens, Scott A. (Inventor); Tranmer, Bruce I. (Inventor)

    2007-01-01

    A whole-body mathematical model (10) for simulating intracranial pressure dynamics. In one embodiment, model (10) includes 17 interacting compartments, of which nine lie entirely outside of intracranial vault (14). Compartments (F) and (T) are defined to distinguish ventricular from extraventricular CSF. The vasculature of the intracranial system within cranial vault (14) is also subdivided into five compartments (A, C, P, V, and S, respectively) representing the intracranial arteries, capillaries, choroid plexus, veins, and venous sinus. The body's extracranial systemic vasculature is divided into six compartments (I, J, O, Z, D, and X, respectively) representing the arteries, capillaries, and veins of the central body and the lower body. Compartments (G) and (B) include tissue and the associated interstitial fluid in the intracranial and lower regions. Compartment (Y) is a composite involving the tissues, organs, and pulmonary circulation of the central body and compartment (M) represents the external environment.

  9. Robotic Simulation of Flexible-Body Spacecraft Dynamics

    NASA Technical Reports Server (NTRS)

    Brannan, Justin C.; Carignan, Craig R.

    2016-01-01

    A robotic testbed has been developed to conduct hardware-in-the-loop simulations of a robotic servicer interacting with a client satellite on-orbit. By creating an analytical model of a satellite with flexible appendages, it is possible to simulate the system response to external force and torque inputs and compare the predicted system motion to a robot mass simulator outfitted with physical appendages. This validation effort includes multiple test cases that encompass the types of interaction forces a satellite might experience during a nominal on-orbit servicing mission and aims to show the simulation's ability to capture the physical system response. After incorporating the flexible-body dynamics into the robotic mass simulator at NASA Goddard Space Flight Center (GSFC), a hardware-in-the-loop simulation can be used to characterize the potential impact of structural flexibility on an end-to-end satellite servicing mission.

  10. N-Body Simulations of Disk Galaxy Interactions

    NASA Astrophysics Data System (ADS)

    Myers, Jeannette; Messick, Garrett; The, Lih-Sin

    2004-11-01

    We present results of N-body simulations for two interacting disk galaxies. The simulated galaxies are initially modeled with parameters fitting observations of the Milky Way Galaxy. We use a four-component model of a disk, dark matter halo, spheroid, and central concentration. In our present simulations, we neglect the gas component and associated star formation. Among our analysis, we address the question of member transference from one galaxy to another. We also examine the rate of member ejections from each disk system and final configurations after the disk interactions.

  11. Discreteness noise versus force errors in N-body simulations

    NASA Technical Reports Server (NTRS)

    Hernquist, Lars; Hut, Piet; Makino, Jun

    1993-01-01

    A low accuracy in the force calculation per time step of a few percent for each particle pair is sufficient for collisionless N-body simulations. Higher accuracy is made meaningless by the dominant discreteness noise in the form of two-body relaxation, which can be reduced only by increasing the number of particles. Since an N-body simulation is a Monte Carlo procedure in which each particle-particle force is essentially random, i.e., carries an error of about 1000 percent, the only requirement is a systematic averaging-out of these intrinsic errors. We illustrate these assertions with two specific examples in which individual pairwise forces are deliberately allowed to carry significant errors: tree-codes on supercomputers and algorithms on special-purpose machines with low-precision hardware.

  12. Cartilage oligomeric matrix protein enhances the vascularization of acellular nerves

    PubMed Central

    Cui, Wei-ling; Qiu, Long-hai; Lian, Jia-yan; Li, Jia-chun; Hu, Jun; Liu, Xiao-lin

    2016-01-01

    Vascularization of acellular nerves has been shown to contribute to nerve bridging. In this study, we used a 10-mm sciatic nerve defect model in rats to determine whether cartilage oligomeric matrix protein enhances the vascularization of injured acellular nerves. The rat nerve defects were treated with acellular nerve grafting (control group) alone or acellular nerve grafting combined with intraperitoneal injection of cartilage oligomeric matrix protein (experimental group). As shown through two-dimensional imaging, the vessels began to invade into the acellular nerve graft from both anastomotic ends at day 7 post-operation, and gradually covered the entire graft at day 21. The vascular density, vascular area, and the velocity of revascularization in the experimental group were all higher than those in the control group. These results indicate that cartilage oligomeric matrix protein enhances the vascularization of acellular nerves. PMID:27127495

  13. RELAXATION IN N-BODY SIMULATIONS OF DISK GALAXIES

    SciTech Connect

    Sellwood, J. A.

    2013-06-01

    I use N-body simulations with two mass species of particles to demonstrate that disk galaxy simulations are subject to collisional relaxation at a higher rate than is widely assumed. Relaxation affects the vertical thickness of the disk most strongly, and drives the velocity ellipsoid to a moderately flattened shape similar to that observed for disk stars in the solar neighborhood. The velocity ellipsoid in simulations with small numbers of particles quickly approaches this shape, but shot noise also dominates the in-plane behavior. Simulations with higher, but reachable, numbers of particles relax slowly enough to be considered collisionless, allowing the in-plane dispersions to rise due to spiral activity without heating the vertical motions. Relaxation may have affected many previously published simulations of the formation and evolution of galaxy disks.

  14. Long-lived spiral waves in N-body simulations

    NASA Technical Reports Server (NTRS)

    Comins, Neil F.; Schroeder, Michael C.

    1989-01-01

    Results of N-body simulations of disc galaxies using a two-dimensional Cartesian N-body code are presented. Both trailing arm spirals (TAS) and leading arm spirals (LAS) were used with varieties of pitch angles and pattern speeds. LAS perturbations transferred their energy to TAS via swing amplification; TAS perturbations led to TAS arms. In both cases the spiral arms persisted for more than 5 rotation periods, but the maximum amplitude 2-armed spirals were generated by LAS perturbations. The persistence of the trailing arm spiral waves is thought to be caused by the kinematic spiral arm mechanism described by Kalnajs (1973).

  15. Model reduction in the simulation of interconnected flexible bodies

    NASA Technical Reports Server (NTRS)

    Eke, Fidelis O.; Man, Guy K.

    1988-01-01

    Given the control system specifications for a system of interconnected rigid and flexible bodies, methods now exist for determining the system modes that do not interact 'strongly' with the controller. Once these important system modes are known, there still remains the problem of determining the modes of individual bodies that should be retained, since, in the final analysis, it is the modal information at the component level that must be fed into any multibody simulation code. Systematic identification of these component modes is achieved through a two-phase matrix diagonalization process starting with judiciously chosen submatrices of the system modal matrix.

  16. A cognitive architecture for simulating bodies and minds.

    PubMed

    Nirenburg, Sergei; McShane, Marjorie; Beale, Stephen; Catizone, Roberta

    2011-01-01

    This paper presents an overview of a cognitive architecture, OntoAgent, that supports the creation and deployment of intelligent agents capable of simulating human-like abilities. The agents, which have a simulated mind and, if applicable, a simulated body, are intended to operate as members of multi-agent teams featuring both artificial and human agents. The agent architecture and its underlying knowledge resources and processors are being developed in a sufficiently generic way to support a variety of applications. In this paper we briefly describe the architecture and two applications being configured within it: the Maryland Virtual Patient (MVP) system for training medical personnel and the CLinician's ADvisor (CLAD). We organize the discussion around four aspects of agent modeling and how they are utilized in the two applications: physiological simulation, modeling an agent's knowledge and learning, decision-making and language processing.

  17. Extended Eden model reproduces growth of an acellular slime mold

    NASA Astrophysics Data System (ADS)

    Wagner, Geri; Halvorsrud, Ragnhild; Meakin, Paul

    1999-11-01

    A stochastic growth model was used to simulate the growth of the acellular slime mold Physarum polycephalum on substrates where the nutrients were confined in separate drops. Growth of Physarum on such substrates was previously studied experimentally and found to produce a range of different growth patterns [Phys. Rev. E 57, 941 (1998)]. The model represented the aging of cluster sites and differed from the original Eden model in that the occupation probability of perimeter sites depended on the time of occupation of adjacent cluster sites. This feature led to a bias in the selection of growth directions. A moderate degree of persistence was found to be crucial to reproduce the biological growth patterns under various conditions. Persistence in growth combined quick propagation in heterogeneous environments with a high probability of locating sources of nutrients.

  18. Improving initial conditions for cosmological N-body simulations

    NASA Astrophysics Data System (ADS)

    Garrison, Lehman H.; Eisenstein, Daniel J.; Ferrer, Douglas; Metchnik, Marc V.; Pinto, Philip A.

    2016-10-01

    In cosmological N-body simulations, the representation of dark matter as discrete `macroparticles' suppresses the growth of structure, such that simulations no longer reproduce linear theory on small scales near kNyquist. Marcos et al. demonstrate that this is due to sparse sampling of modes near kNyquist and that the often-assumed continuum growing modes are not proper growing modes of the particle system. We develop initial conditions (ICs) that respect the particle linear theory growing modes and then rescale the mode amplitudes to account for growth suppression. These ICs also allow us to take advantage of our very accurate N-body code ABACUS to implement second-order Lagrangian perturbation theory (2LPT) in configuration space. The combination of 2LPT and rescaling improves the accuracy of the late-time power spectra, halo mass functions, and halo clustering. In particular, we achieve 1 per cent accuracy in the power spectrum down to kNyquist, versus kNyquist/4 without rescaling or kNyquist/13 without 2LPT, relative to an oversampled reference simulation. We anticipate that our 2LPT will be useful for large simulations where fast Fourier transforms are expensive and that rescaling will be useful for suites of medium-resolution simulations used in cosmic emulators and galaxy survey mock catalogues. Code to generate ICs is available at https://github.com/lgarrison/zeldovich-PLT.

  19. Direct simulation of hypersonic flows over blunt slender bodies

    NASA Technical Reports Server (NTRS)

    Moss, J. N.; Cuda, V., Jr.

    1986-01-01

    Results of a numerical study of low-density hypersonic flow about cylindrically blunted wedges and spherically blunted cones with body half angles of 0, 5, and 10 deg are presented. Most of the transitional flow regime encountered during entry between the free molecule and continuum regimes is simulated for a reentry velocity of 7.5 km/s by including freestream conditions of 70 to 100 km. The bodies are at zero angle of incidence and have diffuse and finite catalytic surfaces. Translational, thermodynamic, and chemical nonequilibrium effects are considered in the numerical simulation by utilizing the direct simulation Monte Carlo (DSMC) method. The numerical simulations show that noncontinuum effects such as surface temperature jump, and velocity slip are evident for all cases considered. The onset of chemical dissociation occurs at a simulated altitude of 96 km for the two-dimensional configurations. Comparisons between the DSMC and continuum viscous shock-layer calculations highlight the significant difference in flowfield structure predicted by the two methods.

  20. PSDF: Particle Stream Data Format for N-body simulations

    NASA Astrophysics Data System (ADS)

    Farr, Will M.; Ames, Jeff; Hut, Piet; Makino, Junichiro; McMillan, Steve; Muranushi, Takayuki; Nakamura, Koichi; Nitadori, Keigo; Portegies Zwart, Simon

    2012-07-01

    We present a data format for the output of general N-body simulations, allowing the presence of individual time steps. By specifying a standard, different N-body integrators and different visualization and analysis programs can all share the simulation data, independent of the type of programs used to produce the data. Our Particle Stream Data Format, PSDF, is specified in YAML, based on the same approach as XML but with a simpler syntax. Together with a specification of PSDF, we provide background and motivation, as well as specific examples in a variety of computer languages. We also offer a web site from which these examples can be retrieved, in order to make it easy to augment existing codes in order to give them the option to produce PSDF output.

  1. Simulation of Wearable Antennas for Body Centric Wireless Communication

    NASA Astrophysics Data System (ADS)

    Cousin, Richard; Rütschlin, Marc; Wittig, Tilmann; Bhattacharya, Arnab

    2015-11-01

    The performance of a body area network (BAN) is strongly dependent on several parameters which make wireless communication quite challenging. For instance, the performance of the antenna itself could be affected by its geometric deformation when the structure is directly integrated into clothes. Operation of the antenna close to the human body necessitates adjusting its design for the intended applications whereas the maximum SAR value estimated in such conditions has to respect the standards. In this context, simulation tools that can take into account specific biological models offer a range of possibilities for investigating and optimizing the performance of BAN devices. Two different applications are presented here: the case of an RFID tag operating at 870 MHz, and a UWB antenna working in a frequency range between 3 and 6 GHz. The simulation tools developed by CST are used in this context to optimize the implementation of BAN devices shown in this paper.

  2. Unsteady aerodynamic simulation of multiple bodies in relative motion

    NASA Technical Reports Server (NTRS)

    Meakin, Robert L.; Suhs, Norman E.

    1989-01-01

    A prototype method for time-accurate simulation of multiple aerodynamic bodies in relative motion is presented. The method is general and features unsteady chimera domain decomposition techniques and an implicit approximately factored finite-difference procedure to solve the time-dependent thin-layer Navier-Stokes equations. The method is applied to a set of two- and three-dimensional test problems to establish spatial and temporal accuracy, quantify computational efficiency, and begin to test overall code robustness.

  3. Interpenetration free simulation of thin shell rigid bodies.

    PubMed

    English, R Elliot; Lentine, Michael; Fedkiw, Ron

    2013-06-01

    We propose a new algorithm for rigid body simulation that guarantees each body is in an interpenetration free state, both increasing the accuracy and robustness of the simulation as well as alleviating the need for ad hoc methods to separate bodies for subsequent simulation and rendering. We cleanly separate collision and contact resolution such that objects move and collide in the first step, with resting contact handled in the second step. The first step of our algorithm guarantees that each time step produces geometry that does not intersect or overlap by using an approximation to the continuous collision detection (and response) problem and, thus, is amenable to thin shells and degenerately flat objects moving at high speeds. In addition, we introduce a novel fail-safe that allows us to resolve all interpenetration without iterating to convergence. Since the first step guarantees a noninterfering state for the geometry, in the second step we propose a contact model for handling thin shells in proximity considering only the instantaneous locations at the ends of the time step. PMID:23559511

  4. Million-Body Star Cluster Simulations: Comparisons between Monte Carlo and Direct N-body

    NASA Astrophysics Data System (ADS)

    Rodriguez, Carl L.; Morscher, Meagan; Wang, Long; Chatterjee, Sourav; Rasio, Frederic A.; Spurzem, Rainer

    2016-08-01

    We present the first detailed comparison between million-body globular cluster simulations computed with a Hénon-type Monte Carlo code, CMC, and a direct N-body code, NBODY6++GPU. Both simulations start from an identical cluster model with 106 particles, and include all of the relevant physics needed to treat the system in a highly realistic way. With the two codes "frozen" (no fine-tuning of any free parameters or internal algorithms of the codes) we find good agreement in the overall evolution of the two models. Furthermore, we find that in both models, large numbers of stellar-mass black holes (>1000) are retained for 12 Gyr. Thus, the very accurate direct N-body approach confirms recent predictions that black holes can be retained in present-day, old globular clusters. We find only minor disagreements between the two models and attribute these to the small-N dynamics driving the evolution of the cluster core for which the Monte Carlo assumptions are less ideal. Based on the overwhelming general agreement between the two models computed using these vastly different techniques, we conclude that our Monte Carlo approach, which is more approximate, but dramatically faster compared to the direct N-body, is capable of producing an accurate description of the long-term evolution of massive globular clusters even when the clusters contain large populations of stellar-mass black holes.

  5. NBODY Codes: Numerical Simulations of Many-body (N-body) Gravitational Interactions

    NASA Astrophysics Data System (ADS)

    Aarseth, Sverre J.

    2011-02-01

    I review the development of direct N-body codes at Cambridge over nearly 40 years, highlighting the main stepping stones. The first code (NBODY1) was based on the simple concepts of a force polynomial combined with individual time steps, where numerical problems due to close encounters were avoided by a softened potential. Fortuitously, the elegant Kustaanheimo-Stiefel two-body regularization soon permitted small star clusters to be studied (NBODY3). Subsequent extensions to unperturbed three-body and four-body regularization proved beneficial in dealing with multiple interactions. Investigations of larger systems became possible with the Ahmad-Cohen neighbor scheme which was used more than 20 years ago for expanding universe models of 4000 galaxies (NBODY2). Combining the neighbor scheme with the regularization procedures enabled more realistic star clusters to be considered (NBODY5). After a period of simulations with no apparent technical progress, chain regularization replaced the treatment of compact subsystems (NBODY3, NBODY5). More recently, the Hermite integration method provided a major advance and has been implemented on the special-purpose HARP computers (NBODY4) together with an alternative version for workstations and supercomputers (NBODY6). These codes also include a variety of algorithms for stellar evolution based on fast lookup functions. The treatment of primordial binaries contains efficient procedures for chaotic two-body motion as well as tidal circularization, and special attention is paid to hierarchical systems and their stability. This family of N-body codes constitutes a powerful tool for dynamical simulations which is freely available to the astronomical community, and the massive effort owes much to collaborators.

  6. Acellular dermal matrix in abdominal wall reconstruction.

    PubMed

    Silverman, Ronald P

    2011-09-01

    Abdominal wall reconstruction is a complex and challenging surgical undertaking. While permanent prosthetic mesh is considered the gold standard for minimizing hernia recurrence, placement of synthetic mesh is sometimes imprudent due to contamination or risk of infection. Acellular dermal matrices (ADM) offer an exciting biologic alternative. This article provides a historical perspective on the evolution of complex ventral hernia repair leading up to and including the placement of ADM, an explanation of the biology of ADM as it relates to ventral hernia repair, and a description of the current indications, techniques, benefits, and shortcomings of its use in the abdominal wall.

  7. Simulating typical entanglement with many-body Hamiltonian dynamics

    SciTech Connect

    Nakata, Yoshifumi; Murao, Mio

    2011-11-15

    We study the time evolution of the amount of entanglement generated by one-dimensional spin-1/2 Ising-type Hamiltonians composed of many-body interactions. We investigate sets of states randomly selected during the time evolution generated by several types of time-independent Hamiltonians by analyzing the distributions of the amount of entanglement of the sets. We compare such entanglement distributions with that of typical entanglement, entanglement of a set of states randomly selected from a Hilbert space with respect to the unitarily invariant measure. We show that the entanglement distribution obtained by a time-independent Hamiltonian can simulate the average and standard deviation of the typical entanglement, if the Hamiltonian contains suitable many-body interactions. We also show that the time required to achieve such a distribution is polynomial in the system size for certain types of Hamiltonians.

  8. Simulation capability for dynamics of two-body flexible satellites

    NASA Technical Reports Server (NTRS)

    Austin, F.; Zetkov, G.

    1973-01-01

    An analysis and computer program were prepared to realistically simulate the dynamic behavior of a class of satellites consisting of two end bodies separated by a connecting structure. The shape and mass distribution of the flexible end bodies are arbitrary; the connecting structure is flexible but massless and is capable of deployment and retraction. Fluid flowing in a piping system and rigid moving masses, representing a cargo elevator or crew members, have been modeled. Connecting structure characteristics, control systems, and externally applied loads are modeled in easily replaced subroutines. Subroutines currently available include a telescopic beam-type connecting structure as well as attitude, deployment, spin and wobble control. In addition, a unique mass balance control system was developed to sense and balance mass shifts due to the motion of a cargo elevator. The mass of the cargo may vary through a large range. Numerical results are discussed for various types of runs.

  9. Dynamic mixing in magma bodies - Theory, simulations, and implications

    NASA Technical Reports Server (NTRS)

    Oldenburg, Curtis M.; Spera, Frank J.; Yuen, David A.; Sewell, Granville

    1989-01-01

    The magma-mixing process is different from the mantle mixing process in that the mixing components of magma are dynamically active, with the melt density depending strongly on composition. This paper describes simulations of time-dependent variable-viscosity double-diffusive convection which were carried out to investigate quantitatively the mixing dynamics of magma in melt-dominated magma bodies. Results show that the dynamics of double-diffusive convection can impart complex patterns of composition, through time and space. The mixing time depends nonlinearly on many factors, including heat flux driving convection, the rate of diffusion of chemical species, the relative importance of thermal and chemical buoyancy, the viscosities of the mixing components, and the shape of the magma body.

  10. Flow Simulation of N2B Hybrid Wing Body Configuration

    NASA Technical Reports Server (NTRS)

    Kim, Hyoungjin; Liou, Meng-Sing

    2012-01-01

    The N2B hybrid wing body aircraft was conceptually designed to meet environmental and performance goals for the N+2 generation transport set by the subsonic fixed wing project. In this study, flow fields around the N2B configuration is simulated using a Reynolds-averaged Navier-Stokes flow solver using unstructured meshes. Boundary conditions at engine fan face and nozzle exhaust planes are provided by response surfaces of the NPSS thermodynamic engine cycle model. The present flow simulations reveal challenging design issues arising from boundary layer ingestion offset inlet and nacelle-airframe interference. The N2B configuration can be a good test bed for application of multidisciplinary design optimization technology.

  11. CFD Approaches for Simulation of Wing-Body Stage Separation

    NASA Technical Reports Server (NTRS)

    Buning, Pieter G.; Gomez, Reynaldo J.; Scallion, William I.

    2004-01-01

    A collection of computational fluid dynamics tools and techniques are being developed and tested for application to stage separation and abort simulation for next-generation launch vehicles. In this work, an overset grid Navier-Stokes flow solver has been enhanced and demonstrated on a matrix of proximity cases and on a dynamic separation simulation of a belly-to-belly wing-body configuration. Steady cases show excellent agreement between Navier-Stokes results, Cartesian grid Euler solutions, and wind tunnel data at Mach 3. Good agreement has been obtained between Navier-Stokes, Euler, and wind tunnel results at Mach 6. An analysis of a dynamic separation at Mach 3 demonstrates that unsteady aerodynamic effects are not important for this scenario. Results provide an illustration of the relative applicability of Euler and Navier-Stokes methods to these types of problems.

  12. N-body simulations for coupled scalar-field cosmology

    SciTech Connect

    Li Baojiu; Barrow, John D.

    2011-01-15

    We describe in detail the general methodology and numerical implementation of consistent N-body simulations for coupled-scalar-field models, including background cosmology and the generation of initial conditions (with the different couplings to different matter species taken into account). We perform fully consistent simulations for a class of coupled-scalar-field models with an inverse power-law potential and negative coupling constant, for which the chameleon mechanism does not work. We find that in such cosmological models the scalar-field potential plays a negligible role except in the background expansion, and the fifth force that is produced is proportional to gravity in magnitude, justifying the use of a rescaled gravitational constant G in some earlier N-body simulation works for similar models. We then study the effects of the scalar coupling on the nonlinear matter power spectra and compare with linear perturbation calculations to see the agreement and places where the nonlinear treatment deviates from the linear approximation. We also propose an algorithm to identify gravitationally virialized matter halos, trying to take account of the fact that the virialization itself is also modified by the scalar-field coupling. We use the algorithm to measure the mass function and study the properties of dark-matter halos. We find that the net effect of the scalar coupling helps produce more heavy halos in our simulation boxes and suppresses the inner (but not the outer) density profile of halos compared with the {Lambda}CDM prediction, while the suppression weakens as the coupling between the scalar field and dark-matter particles increases in strength.

  13. Parallelizing N-Body Simulations on a Heterogeneous Cluster

    NASA Astrophysics Data System (ADS)

    Stenborg, T. N.

    2009-10-01

    This thesis evaluates quantitatively the effectiveness of a new technique for parallelising direct gravitational N-body simulations on a heterogeneous computing cluster. In addition to being an investigation into how a specific computational physics task can be optimally load balanced across the heterogeneity factors of a distributed computing cluster, it is also, more generally, a case study in effective heterogeneous parallelisation of an all-pairs programming task. If high-performance computing clusters are not designed to be heterogeneous initially, they tend to become so over time as new nodes are added, or existing nodes are replaced or upgraded. As a result, effective techniques for application parallelisation on heterogeneous clusters are needed if maximum cluster utilisation is to be achieved and is an active area of research. A custom C/MPI parallel particle-particle N-body simulator was developed, validated and deployed for this evaluation. Simulation communication proceeds over cluster nodes arranged in a logical ring and employs nonblocking message passing to encourage overlap of communication with computation. Redundant calculations arising from force symmetry given by Newton's third law are removed by combining chordal data transfer of accumulated forces with ring passing data transfer. Heterogeneity in node computation speed is addressed by decomposing system data across nodes in proportion to node computation speed, in conjunction with use of evenly sized communication buffers. This scheme is shown experimentally to have some potential in improving simulation performance in comparison with an even decomposition of data across nodes. Techniques for further heterogeneous cluster load balancing are discussed and remain an opportunity for further work.

  14. Acellular organ scaffolds for tumor tissue engineering

    NASA Astrophysics Data System (ADS)

    Guller, Anna; Trusova, Inna; Petersen, Elena; Shekhter, Anatoly; Kurkov, Alexander; Qian, Yi; Zvyagin, Andrei

    2015-12-01

    Rationale: Tissue engineering (TE) is an emerging alternative approach to create models of human malignant tumors for experimental oncology, personalized medicine and drug discovery studies. Being the bottom-up strategy, TE provides an opportunity to control and explore the role of every component of the model system, including cellular populations, supportive scaffolds and signalling molecules. Objectives: As an initial step to create a new ex vivo TE model of cancer, we optimized protocols to obtain organ-specific acellular matrices and evaluated their potential as TE scaffolds for culture of normal and tumor cells. Methods and results: Effective decellularization of animals' kidneys, ureter, lungs, heart, and liver has been achieved by detergent-based processing. The obtained scaffolds demonstrated biocompatibility and growthsupporting potential in combination with normal (Vero, MDCK) and tumor cell lines (C26, B16). Acellular scaffolds and TE constructs have been characterized and compared with morphological methods. Conclusions: The proposed methodology allows creation of sustainable 3D tumor TE constructs to explore the role of organ-specific cell-matrix interaction in tumorigenesis.

  15. Numerical Simulations of Wing-Body Junction Flows

    NASA Technical Reports Server (NTRS)

    Krishnamurthy, R.; Cagle, C.; Chandra, S.

    1996-01-01

    The goal of the research project is to contribute to the optimized design of fan bypass systems in advanced turbofan engines such as the Advanced Ducted Propulsors (ADP). The immediate objective is to perform numerical simulation of duct-strut interactions to elucidate the loss mechanisms associated with this configuration that is characteristic of ADP. These numerical simulations would complement an experimental study being undertaken at Purdue University. As the first step in the process, a numerical study of wing-body junction flow is being undertaken as it shares a number of characteristics with the duct-strut interaction flow. The presence of the characteristic horseshoe vortex and the associated secondary flow are the salient features that contribute to making this flow a challenge to predict numerically. The simulations will be performed with the NPARC code on the CRAY Y-MP platform at LeRC. The grids for the simulation have been generated using an algebraic mapping technique with a multisurface algorithm.

  16. A finite-element simulation of galvanic coupling intra-body communication based on the whole human body.

    PubMed

    Song, Yong; Zhang, Kai; Hao, Qun; Hu, Lanxin; Wang, Jingwen; Shang, Fuzhou

    2012-10-09

    Simulation based on the finite-element (FE) method plays an important role in the investigation of intra-body communication (IBC). In this paper, a finite-element model of the whole body model used for the IBC simulation is proposed and verified, while the FE simulation of the galvanic coupling IBC with different signal transmission paths has been achieved. Firstly, a novel finite-element method for modeling the whole human body is proposed, and a FE model of the whole human body used for IBC simulation was developed. Secondly, the simulations of the galvanic coupling IBC with the different signal transmission paths were implemented. Finally, the feasibility of the proposed method was verified by using in vivo measurements within the frequency range of 10 kHz-5 MHz, whereby some important conclusions were deduced. Our results indicate that the proposed method will offer significant advantages in the investigation of the galvanic coupling intra-body communication.

  17. Large-Eddy Simulation of Supersonic Axisymmetric Bluff Body Wakes

    NASA Astrophysics Data System (ADS)

    Tourbier, D.; Fasel, H. F.

    1997-11-01

    The time-dependent behavior of the turbulent wake of an axisymmetric bluff body is investigated using Large-Eddy Simulation (LES). The axisymmetric body is aligned with a supersonic free stream at a Mach number of M_∞ = 2.46 . It has been shown previously that this flow field is subject to an absolute instability for global Reynolds numbers higher than ReD = 30,000 . As a result of this instability large structures are present in the near wake and render the flow field highly unsteady. These structures have a strong influence on the global behavior of the flow field and thus on the overall drag of the body. Commonly used turbulence models (e.g. in RANS) fail to accurately describe the flow field and are inadequate for drag prediction. Preliminary LES calculations for global Reynolds numbers up to ReD = 400,000 using a Smagorinsky type subgrid-scale model with a fixed constant have shown qualitative agreement with experimental observations in terms of pressure distribution along the blunt base and magnitude of rms values in the wake. However, the model is too dissipative for most parts of the free shear layer emanating from the corner of the base and the evolution of structures in the close vicinity of the corner is suppressed. Therefore, a dynamic subgrid-scale model was implemented into the code and tested to evaluate the performance of the model for this flow configuration.

  18. Numerical Simulation of Hydrothermal Convection in Chondritic Parent Bodies

    NASA Astrophysics Data System (ADS)

    Schubert, G.; Travis, B. J.

    2004-11-01

    Chondritic meteorites are so named because they nearly all contain chondrules - small spherules of olivine and pyroxene that condensed and crystallized in the solar nebula and then combined with other material to form a matrix. Their parent bodies did not differentiate, i.e., form a crust and a core. Carbonaceous chondrites (CCs) derived from undifferentiated icy planetesimals. CCs exhibit liquid water-rock interactions. CCs contain small but significant amounts of radiogenic elements (e.g., 26Al), sufficient to warm up an initially cold planetesimal. A warmed-up phase could last millions of years. During the warmed-up phase, liquid water will form, and could evolve into a hydrothermal convective flow. Flowing water will affect the evolution of minerals. We report on results of a numerical study of the thermal evolution of CCs, considering the major factors that control heating history and possible flow, namely: permeability, radiogenic element content, and planetesimal radius. We determine the time sequence of thermal processes, length of time for a convective phase and patterns of flow, amount of fluid flow throughout the planetesimals, and sensitivity of evolution to primary parameters. We use the MAGHNUM code to simulate 3-D dynamic freezing and thawing and flow of water in a self-gravitating, permeable spherical body. Governing equations are Darcy's law, mass conservation, energy conservation, and the equation of state for water, ice and vapor mixtures. We have simulated the evolution of heating, melting of ice, subsequent flow and eventual re-freezing for several examples of carbonaceous chondrite planetesimals. We have demonstrated that hydrothermal convection should occur for a range of parameter values and would last for several millions of years. Roughly half the interior of simulated planetesimals experience water fluxes of 100--200 pore volumes. High pore volume flux facilitates extensive chemical reactions.

  19. N-Body Simulations of Galaxies in the Cluster Environment

    NASA Astrophysics Data System (ADS)

    Humphrey, Nicholas; Berrington, R. C.

    2010-01-01

    We present numerous N-body simulations of galaxy clusters consisting of up to 600,000 total particles and 50 galaxies each to characterize the evolution of galaxies in the cluster environment. These simulations were run on the Ball State University (BSU) College of Science and Humanities (CSH) 64-node Beowulf Cluster. Because the velocity dispersion (σ) is a tracer of a galaxies’ potential well and therefore its mass, we will use it to examine the mass evolution of the galaxies in the simulations by fitting a function to the σ of the galaxies. The strength of this function is its direct comparison to observational data. We further investigate the evolution of the galaxy structure parameters through the use of projected mass radii and line-of-sight (LOS) σ. Additionally, we discuss the use of alternate orbital parameters such as Vesc to investigate the potential wells of the galaxies. Our goal is to isolate the mass and luminosity evolution from the environmental effects on the evolution of elliptical galaxies. This project is a subset of a continuing study whose intent is to combine observational data with numerical techniques to study the effects of a galaxies’ environment on its mass evolution and internal dynamics.

  20. The biasing scheme in N-body simulations

    NASA Technical Reports Server (NTRS)

    Park, Changbom

    1991-01-01

    A popular prescription for the galaxy formation, i.e., identifying peaks in the linear density field as sites of galaxy formation, is numerically justified under the Cold Dark Matter cosmogony. In particular, the peak-background scheme, originally developed to simplify analytic calculations of peak properties in a Gaussian random density field, is proven to be an excellent prescription for assigning peak tracers in low-resolution N-body simulations through many statistical comparisons. It is found that statistical properties of peak tracers allocated by the peak-background scheme closely resemble those of true peaks when the background smoothing length is about three times the galaxy scale and the correspondence improves as they evolve gravitationally. It is also shown that these peak particles are indeed strongly associated with nonlinear objects that are presently collapsed.

  1. Second-order variational equations for N-body simulations

    NASA Astrophysics Data System (ADS)

    Rein, Hanno; Tamayo, Daniel

    2016-07-01

    First-order variational equations are widely used in N-body simulations to study how nearby trajectories diverge from one another. These allow for efficient and reliable determinations of chaos indicators such as the Maximal Lyapunov characteristic Exponent (MLE) and the Mean Exponential Growth factor of Nearby Orbits (MEGNO). In this paper we lay out the theoretical framework to extend the idea of variational equations to higher order. We explicitly derive the differential equations that govern the evolution of second-order variations in the N-body problem. Going to second order opens the door to new applications, including optimization algorithms that require the first and second derivatives of the solution, like the classical Newton's method. Typically, these methods have faster convergence rates than derivative-free methods. Derivatives are also required for Riemann manifold Langevin and Hamiltonian Monte Carlo methods which provide significantly shorter correlation times than standard methods. Such improved optimization methods can be applied to anything from radial-velocity/transit-timing-variation fitting to spacecraft trajectory optimization to asteroid deflection. We provide an implementation of first- and second-order variational equations for the publicly available REBOUND integrator package. Our implementation allows the simultaneous integration of any number of first- and second-order variational equations with the high-accuracy IAS15 integrator. We also provide routines to generate consistent and accurate initial conditions without the need for finite differencing.

  2. Numerical techniques for large cosmological N-body simulations

    NASA Technical Reports Server (NTRS)

    Efstathiou, G.; Davis, M.; White, S. D. M.; Frenk, C. S.

    1985-01-01

    Techniques for carrying out large N-body simulations of the gravitational evolution of clustering in the fundamental cube of an infinite periodic universe are described and compared. The accuracy of the forces derived from several commonly used particle mesh schemes is examined, showing how submesh resolution can be achieved by including short-range forces between particles by direct summation techniques. The time integration of the equations of motion is discussed, and the accuracy of the codes for various choices of 'time' variable and time step is tested by considering energy conservation as well as by direct analysis of particle trajectories. Methods for generating initial particle positions and velocities corresponding to a growing mode representation of a specified power spectrum of linear density fluctuations are described. The effects of force resolution are studied and different simulation schemes are compared. An algorithm is implemented for generating initial conditions by varying the number of particles, the initial amplitude of density fluctuations, and the initial peculiar velocity field.

  3. N-body simulations of alternative gravity models

    SciTech Connect

    Stabenau, Hans F.; Jain, Bhuvnesh

    2006-10-15

    Theories in which gravity is weaker on cosmological scales have been proposed to explain the observed acceleration of the universe. The nonlinear regime in such theories is not well studied, though it is likely that observational tests of structure formation will lie in this regime. A class of alternative gravity theories may be approximated by modifying Poisson's equation. We have run N-body simulations of a set of such models to study the nonlinear clustering of matter on 1-100 Mpc scales. We find that nonlinear gravity enhances the deviations of the power spectrum of these models from standard gravity. This occurs due to mode coupling, so that models with an excess or deficit of large-scale power (at k<0.2 Mpc{sup -1}) lead to deviations in the power spectrum at smaller scales as well (up to k{approx}1 Mpc{sup -1}), even though the linear spectra match very closely on the smaller scales. This makes it easier to distinguish such models from general relativity using the three-dimensional power spectrum probed by galaxy surveys and the weak lensing power spectrum. If the potential for light deflection is modified in the same way as the potential that affects the dark matter, then weak lensing constrains deviations from gravity even more strongly. Our simulations show that, even with a modified potential, gravitational evolution is approximately universal. Based on this, the Peacock-Dodds approach can be adapted to get an analytical fit for the nonlinear power spectra of alternative gravity models, though the recent Smith et al. formula is less successful. Our conclusions extend to models with modifications of gravity on scales of 1-20 Mpc. We also use a way of measuring projected power spectra from simulations that lowers the sample variance, so that fewer realizations are needed to reach a desired level of accuracy.

  4. Human Acellular Dermis versus Submuscular Tissue Expander Breast Reconstruction: A Multivariate Analysis of Short-Term Complications

    PubMed Central

    Davila, Armando A.; Seth, Akhil K.; Wang, Edward; Hanwright, Philip; Bilimoria, Karl; Fine, Neil

    2013-01-01

    Background Acellular dermal matrix (ADM) allografts and their putative benefits have been increasingly described in prosthesis based breast reconstruction. There have been a myriad of analyses outlining ADM complication profiles, but few large-scale, multi-institutional studies exploring these outcomes. In this study, complication rates of acellular dermis-assisted tissue expander breast reconstruction were compared with traditional submuscular methods by evaluation of the American College of Surgeon's National Surgical Quality Improvement Program (NSQIP) registry. Methods Patients who underwent immediate tissue expander breast reconstruction from 2006-2010 were identified using surgical procedure codes. Two hundred forty tracked variables from over 250 participating sites were extracted for patients undergoing acellular dermis-assisted versus submuscular tissue expander reconstruction. Thirty-day postoperative outcomes and captured risk factors for complications were compared between the two groups. Results A total of 9,159 patients underwent tissue expander breast reconstruction; 1,717 using acellular dermis and 7,442 with submuscular expander placement. Total complications and reconstruction related complications were similar in both cohorts (5.5% vs. 5.3%, P=0.68 and 4.7% vs. 4.3%, P=0.39, respectively). Multivariate logistic regression revealed body mass index and smoking as independent risk factors for reconstructive complications in both cohorts (P<0.01). Conclusions The NSQIP database provides large-scale, multi-institutional, independent outcomes for acellular dermis and submuscular breast reconstruction. Both thirty-day complication profiles and risk factors for post operative morbidity are similar between these two reconstructive approaches. PMID:23362476

  5. Hydrodynamical N-body simulations of coupled dark energy cosmologies

    NASA Astrophysics Data System (ADS)

    Baldi, Marco; Pettorino, Valeria; Robbers, Georg; Springel, Volker

    2010-04-01

    If the accelerated expansion of the Universe at the present epoch is driven by a dark energy scalar field, there may well be a non-trivial coupling between the dark energy and the cold dark matter (CDM) fluid. Such interactions give rise to new features in cosmological structure growth, like an additional long-range attractive force between CDM particles, or variations of the dark matter particle mass with time. We have implemented these effects in the N-body code GADGET-2 and present results of a series of high-resolution N-body simulations where the dark energy component is directly interacting with the CDM. As a consequence of the new physics, CDM and baryon distributions evolve differently both in the linear and in the non-linear regime of structure formation. Already on large scales, a linear bias develops between these two components, which is further enhanced by the non-linear evolution. We also find, in contrast with previous work, that the density profiles of CDM haloes are less concentrated in coupled dark energy cosmologies compared with ΛCDM, and that this feature does not depend on the initial conditions setup, but is a specific consequence of the extra physics induced by the coupling. Also, the baryon fraction in haloes in the coupled models is significantly reduced below the universal baryon fraction. These features alleviate tensions between observations and the ΛCDM model on small scales. Our methodology is ideally suited to explore the predictions of coupled dark energy models in the fully non-linear regime, which can provide powerful constraints for the viable parameter space of such scenarios.

  6. New material model for simulating large impacts on rocky bodies

    NASA Astrophysics Data System (ADS)

    Tonge, A.; Barnouin, O.; Ramesh, K.

    2014-07-01

    Large impact craters on an asteroid can provide insights into its internal structure. These craters can expose material from the interior of the body at the impact site [e.g., 1]; additionally, the impact sends stress waves throughout the body, which interrogate the asteroid's interior. Through a complex interplay of processes, such impacts can result in a variety of motions, the consequence of which may appear as lineaments that are exposed over all or portions of the asteroid's surface [e.g., 2,3]. While analytic, scaling, and heuristic arguments can provide some insight into general phenomena on asteroids, interpreting the results of a specific impact event, or series of events, on a specific asteroid geometry generally necessitates the use of computational approaches that can solve for the stress and displacement history resulting from an impact event. These computational approaches require a constitutive model for the material, which relates the deformation history of a small material volume to the average force on the boundary of that material volume. In this work, we present a new material model that is suitable for simulating the failure of rocky materials during impact events. This material model is similar to the model discussed in [4]. The new material model incorporates dynamic sub-scale crack interactions through a micro-mechanics-based damage model, thermodynamic effects through the use of a Mie-Gruneisen equation of state, and granular flow of the fully damaged material. The granular flow model includes dilatation resulting from the mutual interaction of small fragments of material (grains) as they are forced to slide and roll over each other and includes a P-α type porosity model to account for compaction of the granular material in a subsequent impact event. The micro-mechanics-based damage model provides a direct connection between the flaw (crack) distribution in the material and the rate-dependent strength. By connecting the rate

  7. Direct numerical simulation of the sea flows around blunt bodies

    NASA Astrophysics Data System (ADS)

    Matyushin, Pavel V.; Gushchin, Valentin A.

    2015-11-01

    The aim of the present paper is the demonstration of the opportunities of the mathematical modeling of the separated flows of the sea water around blunt bodies on the basis of the Navier-Stokes equations (NSE) in the Boussinesq approximation. The 3D density stratified incompressible viscous fluid flows around a sphere have been investigated by means of the direct numerical simulation (DNS) on supercomputers and the visualization of the 3D vortex structures in the wake. For solving of NSE the Splitting on physical factors Method for Incompressible Fluid flows (SMIF) with hybrid explicit finite difference scheme (second-order accuracy in space, minimum scheme viscosity and dispersion, capable for work in wide range of the Reynolds (Re) and the internal Froude (Fr) numbers and monotonous) has been developed and successfully applied. The different transitions in sphere wakes with increasing of Re (10 < Re < 500) and decreasing of Fr (0.005 < Fr < 100) have been investigated in details. Thus the classifications of the viscous fluid flow regimes around a sphere have been refined.

  8. FORMING CIRCUMBINARY PLANETS: N-BODY SIMULATIONS OF KEPLER-34

    SciTech Connect

    Lines, S.; Leinhardt, Z. M.; Paardekooper, S.; Baruteau, C.; Thebault, P.

    2014-02-10

    Observations of circumbinary planets orbiting very close to the central stars have shown that planet formation may occur in a very hostile environment, where the gravitational pull from the binary should be very strong on the primordial protoplanetary disk. Elevated impact velocities and orbit crossings from eccentricity oscillations are the primary contributors to high energy, potentially destructive collisions that inhibit the growth of aspiring planets. In this work, we conduct high-resolution, inter-particle gravity enabled N-body simulations to investigate the feasibility of planetesimal growth in the Kepler-34 system. We improve upon previous work by including planetesimal disk self-gravity and an extensive collision model to accurately handle inter-planetesimal interactions. We find that super-catastrophic erosion events are the dominant mechanism up to and including the orbital radius of Kepler-34(AB)b, making in situ growth unlikely. It is more plausible that Kepler-34(AB)b migrated from a region beyond 1.5 AU. Based on the conclusions that we have made for Kepler-34, it seems likely that all of the currently known circumbinary planets have also migrated significantly from their formation location with the possible exception of Kepler-47(AB)c.

  9. Corrosion and tribocorrosion of hafnium in simulated body fluids.

    PubMed

    Rituerto Sin, J; Neville, A; Emami, N

    2014-08-01

    Hafnium is a passive metal with good biocompatibility and osteogenesis, however, little is known about its resistance to wear and corrosion in biological environments. The corrosion and tribocorrosion behavior of hafnium and commercially pure (CP) titanium in simulated body fluids were investigated using electrochemical techniques. Cyclic polarization scans and open circuit potential measurements were performed in 0.9% NaCl solution and 25% bovine calf serum solution to assess the effect of organic species on the corrosion behavior of the metal. A pin-on-plate configuration tribometer and a three electrode electrochemical cell were integrated to investigate the tribocorrosion performance of the studied materials. The results showed that hafnium has good corrosion resistance. The corrosion density currents measured in its passive state were lower than those measured in the case of CP titanium; however, it showed a higher tendency to suffer from localized corrosion, which was more acute when imperfections were present on the surface. The electrochemical breakdown of the oxide layer was retarded in the presence of proteins. Tribocorrosion tests showed that hafnium has the ability to quickly repassivate after the oxide layer was damaged; however, it showed higher volumetric loss than CP titanium in equivalent wear-corrosion conditions. © 2013 Wiley Periodicals, Inc. J Biomed Mater Res Part B: Appl Biomater, 102B: 1157-1164, 2014.

  10. SKID: Finding Gravitationally Bound Groups in N-body Simulations

    NASA Astrophysics Data System (ADS)

    N-Body Shop

    2011-02-01

    SKID finds gravitationally bound groups in N-body simulations. The SKID program will group different types of particles depending on the type of input binary file. This could be either dark matter particles, gas particles, star particles or gas and star particles depending on what is in the input tipsy binary file. Once groups with at least a certain minimum number of members have been determined, SKID will remove particles which are not bound to the group. SKID must use the original positions of all the particles to determine whether or not particles are bound. This procedure which we call unbinding, is again dependent on the type of grouping we are dealing with. There are two cases, one for dark matter only or star particles only (case 1 unbinding), the other for inputs including gas (also stars in a dark matter environment this is case 2 unbinding). Skid version 1.3 is a much improved version of the old denmax-1.1 version. The new name was given to avoid confusion with the DENMAX program of Gelb & Bertschinger, and although it is based on the same idea it represents a substantial evolution in the method.

  11. N-body simulations of viscous instability of planetary rings

    NASA Astrophysics Data System (ADS)

    Salo, Heikki; Schmidt, Jürgen

    2010-04-01

    We study viscous instability of planetary rings in terms of N-body simulations. We show that for rings composed of fairly elastic particles (e.g. as in Hatzes et al. [Hatzes, A., Bridges, F.G., Lin, D.N.C., 1988. Collisional properties of ice spheres at low impact velocities. Mon. Not. R. Astron. Soc. 231, 1091-1115]) the instability may lead to the spontaneous formation of dense ringlets in a background of lower density. In most parts of Saturn's rings the particle collisions are probably much more dissipative, as suggested by the presence of self-gravity wakes, and classic viscous instability should be suppressed. However, our results demonstrate that the mechanism of viscous instability itself is valid. The dynamical effects of size-dependent elasticity in a system with a size distribution have never been studied before. We show that this may in principle lead to a size-selective viscous instability, small particles concentrating on ringlets against the more uniform background of large particles.

  12. Classical simulation of quantum many-body systems

    NASA Astrophysics Data System (ADS)

    Huang, Yichen

    Classical simulation of quantum many-body systems is in general a challenging problem for the simple reason that the dimension of the Hilbert space grows exponentially with the system size. In particular, merely encoding a generic quantum many-body state requires an exponential number of bits. However, condensed matter physicists are mostly interested in local Hamiltonians and especially their ground states, which are highly non-generic. Thus, we might hope that at least some physical systems allow efficient classical simulation. Starting with one-dimensional (1D) quantum systems (i.e., the simplest nontrivial case), the first basic question is: Which classes of states have efficient classical representations? It turns out that this question is quantitatively related to the amount of entanglement in the state, for states with "little entanglement'' are well approximated by matrix product states (a data structure that can be manipulated efficiently on a classical computer). At a technical level, the mathematical notion for "little entanglement'' is area law, which has been proved for unique ground states in 1D gapped systems. We establish an area law for constant-fold degenerate ground states in 1D gapped systems and thus explain the effectiveness of matrix-product-state methods in (e.g.) symmetry breaking phases. This result might not be intuitively trivial as degenerate ground states in gapped systems can be long-range correlated. Suppose an efficient classical representation exists. How can one find it efficiently? The density matrix renormalization group is the leading numerical method for computing ground states in 1D quantum systems. However, it is a heuristic algorithm and the possibility that it may fail in some cases cannot be completely ruled out. Recently, a provably efficient variant of the density matrix renormalization group has been developed for frustration-free 1D gapped systems. We generalize this algorithm to all (i.e., possibly frustrated) 1D

  13. [A study on three dimensional modeling of human body in man-machine system simulation].

    PubMed

    Wei, B; Yuan, X

    1997-12-01

    Modeling of the human body is a basic problem in human-machine system simulation. In this study a B-spline surface model of the human body was established. In the modeling, human body is split into several segments and each segment is a cubic B-spline surface. A blend surface was used to link two jointed segments. It is easy to simulate the motion of the human body by using the algorithm of axial deformation. PMID:11540444

  14. Acellular Dermal Matrix in Rotator Cuff Surgery.

    PubMed

    Cooper, Joseph; Mirzayan, Raffy

    2016-01-01

    The success of rotator cuff repair (RCR) surgery can be measured clinically (validated outcome scores, range of motion) as well as structurally (re-tear rates using imaging studies). Regardless of repair type or technique, most studies have shown that patients do well clinically. However, multiple studies have also shown that structurally, the failure rate can be very high. A variety of factors, including poor tendon quality, age over 63 years, smoking, advanced fatty infiltration into the muscle, and the inability of the tendon to heal to bone, have been implicated as the cause of the high re-tear rate in RCRs. The suture-tendon interface is felt to be the weakest link in the RCR construct, and suture pullout through the tendon is believed to be the most common method of failure. This review of the published literature seeks to determine if there is support for augmentation of RCR with acellular dermal matrices to strengthen the suture-tendon interface and reduce the re-tear rate. PMID:27552454

  15. Numerical Simulation of Floating Bodies in Extreme Free Surface Waves

    NASA Astrophysics Data System (ADS)

    Hu, Zheng Zheng; Causon, Derek; Mingham, Clive; Qiang, Ling

    2010-05-01

    and efficient. Firstly, extreme design wave conditions are generated in an empty NWT and compared with physical experiments as a precursor to calculations to investigate the survivability of the Bobber device operating in a challenging wave climate. Secondly, we consider a bench-mark test case involving in a first order regular wave maker acting on a fixed cylinder and Pelamis. Finally, a floating Bobber has been simulated under extreme wave conditions. These results will be reported at the meeting. Causon D.M., Ingram D.M., Mingham C.G., Yang G. Pearson R.V. (2000). Calculation of shallow water flows using a Cartesian cut cell approach. Advances in Water resources, 23: 545-562. Causon D.M., Ingram D.M., Mingham C.G. (2000). A Cartesian cut cell method for shallow water flows with moving boundaries. Advances in Water resources, 24: 899-911. Dalzell J.F. 1999 A note on finite depth second-order wave-wave interactions. Appl. Ocean Res. 21, 105-111. Ning D.Z., Zang J., Liu S.X. Eatock Taylor R. Teng B. & Taylor P.H. 2009 Free surface and wave kinematics for nonlinear focused wave groups. J. Ocean Engineering. Accepted. Hu Z.Z., Causon D.M., Mingham C.M. and Qian L.(2009). Numerical wave tank study of a wave energy converter in heave. Proceedlings 19th ISOPE conference, Osaka, Japan Qian L., Causon D.M. & Mingham C.G., Ingram D.M. 2006 A free-surface capturing method for two fluid flows with moving bodies. Proc. Roy. Soc. London, Vol. A 462 21-42.

  16. Bluff Body Flow Simulation Using a Vortex Element Method

    SciTech Connect

    Anthony Leonard; Phillippe Chatelain; Michael Rebel

    2004-09-30

    Heavy ground vehicles, especially those involved in long-haul freight transportation, consume a significant part of our nation's energy supply. it is therefore of utmost importance to improve their efficiency, both to reduce emissions and to decrease reliance on imported oil. At highway speeds, more than half of the power consumed by a typical semi truck goes into overcoming aerodynamic drag, a fraction which increases with speed and crosswind. Thanks to better tools and increased awareness, recent years have seen substantial aerodynamic improvements by the truck industry, such as tractor/trailer height matching, radiator area reduction, and swept fairings. However, there remains substantial room for improvement as understanding of turbulent fluid dynamics grows. The group's research effort focused on vortex particle methods, a novel approach for computational fluid dynamics (CFD). Where common CFD methods solve or model the Navier-Stokes equations on a grid which stretches from the truck surface outward, vortex particle methods solve the vorticity equation on a Lagrangian basis of smooth particles and do not require a grid. They worked to advance the state of the art in vortex particle methods, improving their ability to handle the complicated, high Reynolds number flow around heavy vehicles. Specific challenges that they have addressed include finding strategies to accurate capture vorticity generation and resultant forces at the truck wall, handling the aerodynamics of spinning bodies such as tires, application of the method to the GTS model, computation time reduction through improved integration methods, a closest point transform for particle method in complex geometrics, and work on large eddy simulation (LES) turbulence modeling.

  17. Two-body relaxation in simulated cosmological haloes

    NASA Astrophysics Data System (ADS)

    El-Zant, Amr A.

    2006-08-01

    This paper aims to quantify, in a general manner that does not directly resort to large-scale calculations, discreteness effects acting on the dynamics of dark matter haloes forming in the context of cosmological simulations. By generalizing the standard formulation of two-body relaxation to the case when the size and mass distributions are variable, and parametrizing the time evolution using established empirical relations, we find that the dynamics of a million-particle halo is noise-dominated within the inner per cent of the final virial radius. Far larger particle numbers (~108) are required for the rms perturbations to the velocity to drop to the 10per cent level there. The radial scaling of the relaxation time is simple and strong: trelax ~r2, implying that numbers >>108 are required to faithfully model the very inner regions; artificial relaxation may thus constitute an important factor, contributing to the contradictory claims concerning the persistence of a power-law density cusp to the very centre. The cores of substructure haloes can be many relaxation times old. Since relaxation first causes their expansion before recontraction occurs, it may render them either more difficult or easier to disrupt, depending on their orbital parameters. This may modify the characteristics of the subhalo distribution; and if, as suggested by several authors, it is parent-satellite interactions that determine halo profiles, the overall structure of the system may be affected. We derive simple closed form formulae for the characteristic relaxation time of both parents and satellites, and an elementary argument deducing the weak N-scaling reported by Diemand et al. when the main contribution comes from relaxing subhaloes.

  18. Challenges to acellular biological scaffold mediated skeletal muscle tissue regeneration.

    PubMed

    Corona, Benjamin T; Greising, Sarah M

    2016-10-01

    Volumetric muscle loss (VML) injuries present a complex and heterogeneous clinical problem that results in a chronic loss of muscle tissue and strength. The primary limitation to muscle tissue regeneration after VML injury is the frank loss of all native muscle constituents in the defect, especially satellite cells and the basal lamina. Recent advancements in regenerative medicine have set forth encouraging and emerging translational and therapeutic options for these devastating injuries including the surgical implantation of acellular biological scaffolds. While these biomaterials can modulate the wound environment, the existing data do not support their capacity to promote appreciable muscle fiber regeneration that can contribute to skeletal muscle tissue functional improvements. An apparent restriction of endogenous satellite cell (i.e., pax7(+)) migration to acellular biological scaffolds likely underlies this deficiency. This work critically evaluates the role of an acellular biological scaffold in orchestrating skeletal muscle tissue regeneration, specifically when used as a regenerative medicine approach for VML injury. PMID:27472161

  19. Challenges to acellular biological scaffold mediated skeletal muscle tissue regeneration.

    PubMed

    Corona, Benjamin T; Greising, Sarah M

    2016-10-01

    Volumetric muscle loss (VML) injuries present a complex and heterogeneous clinical problem that results in a chronic loss of muscle tissue and strength. The primary limitation to muscle tissue regeneration after VML injury is the frank loss of all native muscle constituents in the defect, especially satellite cells and the basal lamina. Recent advancements in regenerative medicine have set forth encouraging and emerging translational and therapeutic options for these devastating injuries including the surgical implantation of acellular biological scaffolds. While these biomaterials can modulate the wound environment, the existing data do not support their capacity to promote appreciable muscle fiber regeneration that can contribute to skeletal muscle tissue functional improvements. An apparent restriction of endogenous satellite cell (i.e., pax7(+)) migration to acellular biological scaffolds likely underlies this deficiency. This work critically evaluates the role of an acellular biological scaffold in orchestrating skeletal muscle tissue regeneration, specifically when used as a regenerative medicine approach for VML injury.

  20. Rigid Body Motion in Stereo 3D Simulation

    ERIC Educational Resources Information Center

    Zabunov, Svetoslav

    2010-01-01

    This paper addresses the difficulties experienced by first-grade students studying rigid body motion at Sofia University. Most quantities describing the rigid body are in relations that the students find hard to visualize and understand. They also lose the notion of cause-result relations between vector quantities, such as the relation between…

  1. Modal reduction strategies for interconnected flexible bodies simulation

    NASA Technical Reports Server (NTRS)

    Eke, F. O.; Man, G. K.

    1989-01-01

    Multi-body dynamics programs require characterization of each body. The Galileo spacecraft system modes to be retained were determined using available criteria, modal influence coefficients, and bode. The descent to component level was achieved via a two-phase diagonalization process starting with submatrices of truncated augmented system modal matrix.

  2. Body Constraints on Motor Simulation in Autism Spectrum Disorders

    ERIC Educational Resources Information Center

    Conson, Massimiliano; Hamilton, Antonia; De Bellis, Francesco; Errico, Domenico; Improta, Ilaria; Mazzarella, Elisabetta; Trojano, Luigi; Frolli, Alessandro

    2016-01-01

    Developmental data suggested that mental simulation skills become progressively dissociated from overt motor activity across development. Thus, efficient simulation is rather independent from current sensorimotor information. Here, we tested the impact of bodily (sensorimotor) information on simulation skills of adolescents with Autism Spectrum…

  3. Differentiation of mesenchymal stem cells into neuronal cells on fetal bovine acellular dermal matrix as a tissue engineered nerve scaffold.

    PubMed

    Feng, Yuping; Wang, Jiao; Ling, Shixin; Li, Zhuo; Li, Mingsheng; Li, Qiongyi; Ma, Zongren; Yu, Sijiu

    2014-11-15

    The purpose of this study was to assess fetal bovine acellular dermal matrix as a scaffold for supporting the differentiation of bone marrow mesenchymal stem cells into neural cells following induction with neural differentiation medium. We performed long-term, continuous observation of cell morphology, growth, differentiation, and neuronal development using several microscopy techniques in conjunction with immunohistochemistry. We examined specific neuronal proteins and Nissl bodies involved in the differentiation process in order to determine the neuronal differentiation of bone marrow mesenchymal stem cells. The results show that bone marrow mesenchymal stem cells that differentiate on fetal bovine acellular dermal matrix display neuronal morphology with unipolar and bi/multipolar neurite elongations that express neuronal-specific proteins, including βIII tubulin. The bone marrow mesenchymal stem cells grown on fetal bovine acellular dermal matrix and induced for long periods of time with neural differentiation medium differentiated into a multilayered neural network-like structure with long nerve fibers that was composed of several parallel microfibers and neuronal cells, forming a complete neural circuit with dendrite-dendrite to axon-dendrite to dendrite-axon synapses. In addition, growth cones with filopodia were observed using scanning electron microscopy. Paraffin sectioning showed differentiated bone marrow mesenchymal stem cells with the typical features of neuronal phenotype, such as a large, round nucleus and a cytoplasm full of Nissl bodies. The data suggest that the biological scaffold fetal bovine acellular dermal matrix is capable of supporting human bone marrow mesenchymal stem cell differentiation into functional neurons and the subsequent formation of tissue engineered nerve.

  4. Overlapped conic simulation of three-body trajectories

    NASA Technical Reports Server (NTRS)

    Wilson, S. W., Jr.

    1970-01-01

    Trajectory computation technique for three-body motion is based on analytical derivation and empirical validation of pseudostate theory. Application of technique yields ''overlapped conic'' trajectories with error magnitudes only 20 percent as great as those of patched conic trajectories.

  5. Exact Controllability of a Piezoelectric Body. Theory and Numerical Simulation

    SciTech Connect

    Miara, Bernadette Muench, Arnaud

    2009-06-15

    We study the exact controllability of a three-dimensional body made of a material whose constitutive law introduces an elasticity-electricity coupling. We show that a coupled elastic-electric control acting on the whole boundary of the body drives the system to rest after time large enough. Two-dimensional numerical experiments suggest that controllability can still be achieved by relaxing this restrictive condition using either both controls on a reduced support or elastic control alone.

  6. Extreme Environment Simulation - Current and New Capabilities to Simulate Venus and Other Planetary Bodies

    NASA Technical Reports Server (NTRS)

    Kremic, Tibor; Vento, Dan; Lalli, Nick; Palinski, Timothy

    2014-01-01

    Science, technology, and planetary mission communities have a growing interest in components and systems that are capable of working in extreme (high) temperature and pressure conditions. Terrestrial applications range from scientific research, aerospace, defense, automotive systems, energy storage and power distribution, deep mining and others. As the target environments get increasingly extreme, capabilities to develop and test the sensors and systems designed to operate in such environments will be required. An application of particular importance to the planetary science community is the ability for a robotic lander to survive on the Venus surface where pressures are nearly 100 times that of Earth and temperatures approach 500C. The scientific importance and relevance of Venus missions are stated in the current Planetary Decadal Survey. Further, several missions to Venus were proposed in the most recent Discovery call. Despite this interest, the ability to accurately simulate Venus conditions at a scale that can test and validate instruments and spacecraft systems and accurately simulate the Venus atmosphere has been lacking. This paper discusses and compares the capabilities that are known to exist within and outside the United States to simulate the extreme environmental conditions found in terrestrial or planetary surfaces including the Venus atmosphere and surface. The paper then focuses on discussing the recent additional capability found in the NASA Glenn Extreme Environment Rig (GEER). The GEER, located at the NASA Glenn Research Center in Cleveland, Ohio, is designed to simulate not only the temperature and pressure extremes described, but can also accurately reproduce the atmospheric compositions of bodies in the solar system including those with acidic and hazardous elements. GEER capabilities and characteristics are described along with operational considerations relevant to potential users. The paper presents initial operating results and concludes

  7. Message in the "Body": Effects of Simulation in Sentence Production

    ERIC Educational Resources Information Center

    Sato, Manami

    2010-01-01

    This study investigates the role of mental simulation in message formulation and grammatical encoding in two typologically distinct languages, English and Japanese. It examines relationships among physical motion, mental simulation, and sentence production, following the claims of Perceptual Symbol Systems (Barsalou, 1999) that people understand…

  8. Efficiency and capabilities of multi-body simulations

    NASA Technical Reports Server (NTRS)

    Vandervoort, R. J.

    1989-01-01

    Simulation efficiency and capability go hand in hand. The more capability you have the lower the efficiency will be. The efficiency and capabilities are discussed. The lesson learned about generic simulation is: Don't rule out any capabilities at the beginning, but keep each one on a switch so it can be bypassed when warranted by a specific application.

  9. The direct numerical simulations of the turbulent wakes of axisymmetric bodies

    NASA Technical Reports Server (NTRS)

    Riley, J. J.; Metcalfe, R. W.

    1978-01-01

    Results of direct numerical simulations of turbulence are compared with both laboratory data and self-similarity theory for the case of the turbulent wakes of towed, axisymmetric bodies. In general, the agreement of the simulation results with both the laboratory data and the self-similarity theory is good, although the comparisons are hampered by inadequate procedures for initializing the numerical simulations.

  10. Visualization of N-body Simulations in Virtual Worlds

    NASA Astrophysics Data System (ADS)

    Knop, Robert A.; Ames, J.; Djorgovski, G.; Farr, W.; Hut, P.; Johnson, A.; McMillan, S.; Nakasone, A.; Vesperini, E.

    2010-01-01

    We report on work to use virtual worlds for visualizing the results of N-body calculations, on three levels. First, we have written a demonstration 3-body solver entirely in the scripting language of the popularly used virtual world Second Life. Second, we have written a physics module for the open source virtual world OpenSim that performs N-body calculations as the physics engine for the server, allowing natural 3-d visualization of the solution as the solution is being performed. Finally, we give an initial report on the potential use of virtual worlds to visualize calculations which have previously been performed, or which are being performed in other processes and reported to the virtual world server. This work has been performed as part of the Meta-Institute of Computational Astrophysics (MICA). http://www.mica-vw.org

  11. Evaluation of lymphangiogenesis in acellular dermal matrix

    PubMed Central

    Cherubino, Mario; Pellegatta, Igor; Tamborini, Federico; Cerati, Michele; Sessa, Fausto; Valdatta, Luigi

    2014-01-01

    Introduction: Much attention has been directed towards understanding the phenomena of angiogenesis and lymphangiogenesis in wound healing. Thanks to the manifold dermal substitute available nowadays, wound treatment has improved greatly. Many studies have been published about angiogenesis and cell invasion in INTEGRA®. On the other hand, the development of the lymphatic network in acellular dermal matrix (ADM) is a more obscure matter. In this article, we aim to characterize the different phases of host cell invasion in ADM. Special attention was given to lymphangiogenic aspects. Materials and Methods: Among 57 rats selected to analyse the role of ADM in lymphangiogenesis, we created four groups. We performed an excision procedure on both thighs of these rats: On the left one we did not perform any action except repairing the borders of the wound; while on the right one we used INTEGRA® implant. The excision biopsy was performed at four different times: First group after 7 days, second after 14 days, third after 21 days and fourth after 28 days. For our microscopic evaluation, we used the classical staining technique of haematoxylin and eosin and a semi-quantitative method in order to evaluate cellularity counts. To assess angiogenesis and lymphangiogenesis development we employed PROX-1 Ab and CD31/PECAM for immunohistochemical analysis. Results: We found remarkable wound contraction in defects that healed by secondary intention while minor wound contraction was observed in defects treated with ADM. At day 7, optical microscopy revealed a more plentiful cellularity in the granulation tissue compared with the dermal regeneration matrix. The immunohistochemical process highlighted vascular and lymphatic cells in both groups. After 14 days a high grade of fibrosis was noticeable in the non-treated group. At day 21, both lymphatic and vascular endothelial cells were better developed in the group with a dermal matrix application. At day 28, lymphatic endothelial

  12. Direct simulation Monte Carlo and Navier-Stokes simulations of blunt body wake flows

    NASA Astrophysics Data System (ADS)

    Moss, James N.; Mitcheltree, Robert A.; Dogra, Virendra K.; Wilmoth, Richard G.

    1994-07-01

    Numerical results obtained with direct simulation Monte Carlo and Navier-Stokes methods are presented for a Mach-20 nitrogen flow about a 70-deg blunted cone. The flow conditions simuulated are those that can be obtained in existing low-density hypersonic wind tunnels. Three sets of flow conditions are considered with freestream Knudsen numbers ranging from 0.03 to 0.001. The focus is on the wake structure: how the wake structure changes as a function of rarefaction, what the afterbody levels of heating are, and to what limits the continuum models are realistic as rarefaction in the wake is progressively increased. Calculations are made with and without an afterbody sting. Results for the after body sting are emphasizes in anticipation of an experimental study for the current flow conditions and model configuration. The Navier-Stokes calculations were made with and without slip boundary conditions. Comparisons of the results obtained with the two simulation methodologies are made for both flowfield structure and surface quantities.

  13. Direct simulation Monte Carlo and Navier-Stokes simulations of blunt body wake flows

    NASA Technical Reports Server (NTRS)

    Moss, James N.; Mitcheltree, Robert A.; Dogra, Virendra K.; Wilmoth, Richard G.

    1994-01-01

    Numerical results obtained with direct simulation Monte Carlo and Navier-Stokes methods are presented for a Mach-20 nitrogen flow about a 70-deg blunted cone. The flow conditions simuulated are those that can be obtained in existing low-density hypersonic wind tunnels. Three sets of flow conditions are considered with freestream Knudsen numbers ranging from 0.03 to 0.001. The focus is on the wake structure: how the wake structure changes as a function of rarefaction, what the afterbody levels of heating are, and to what limits the continuum models are realistic as rarefaction in the wake is progressively increased. Calculations are made with and without an afterbody sting. Results for the after body sting are emphasizes in anticipation of an experimental study for the current flow conditions and model configuration. The Navier-Stokes calculations were made with and without slip boundary conditions. Comparisons of the results obtained with the two simulation methodologies are made for both flowfield structure and surface quantities.

  14. Acellular Nerve Allografts in Peripheral Nerve Regeneration: A Comparative Study

    PubMed Central

    Moore, Amy M.; MacEwan, Matthew; Santosa, Katherine B.; Chenard, Kristofer E.; Ray, Wilson Z.; Hunter, Daniel A.; Mackinnon, Susan E.; Johnson, Philip J.

    2011-01-01

    Background Processed nerve allografts offer a promising alternative to nerve autografts in the surgical management of peripheral nerve injuries where short deficits exist. Methods Three established models of acellular nerve allograft (cold-preserved, detergent-processed, and AxoGen® -processed nerve allografts) were compared to nerve isografts and silicone nerve guidance conduits in a 14 mm rat sciatic nerve defect. Results All acellular nerve grafts were superior to silicone nerve conduits in support of nerve regeneration. Detergent-processed allografts were similar to isografts at 6 weeks post-operatively, while AxoGen®-processed and cold-preserved allografts supported significantly fewer regenerating nerve fibers. Measurement of muscle force confirmed that detergent-processed allografts promoted isograft-equivalent levels of motor recovery 16 weeks post-operatively. All acellular allografts promoted greater amounts of motor recovery compared to silicone conduits. Conclusions These findings provide evidence that differential processing for removal of cellular constituents in preparing acellular nerve allografts affects recovery in vivo. PMID:21660979

  15. Computer simulation of plasma and N-body problems

    NASA Technical Reports Server (NTRS)

    Harries, W. L.; Miller, J. B.

    1975-01-01

    The following FORTRAN language computer codes are presented: (1) efficient two- and three-dimensional central force potential solvers; (2) a three-dimensional simulator of an isolated galaxy which incorporates the potential solver; (3) a two-dimensional particle-in-cell simulator of the Jeans instability in an infinite self-gravitating compressible gas; and (4) a two-dimensional particle-in-cell simulator of a rotating self-gravitating compressible gaseous system of which rectangular coordinate and superior polar coordinate versions were written.

  16. Possible role of dentin matrix in region-specific deposition of cellular and acellular extrinsic fibre cementum.

    PubMed

    Takano, Yoshiro; Sakai, Hideo; Watanabe, Eiko; Ideguchi-Ohma, Noriko; Jayawardena, Chantha K; Arai, Kazumi; Asawa, Yukiyo; Nakano, Yukiko; Shuda, Yoko; Sakamoto, Yujiro; Terashima, Tatsuo

    2003-01-01

    The mechanism whereby a region-specific deposition of the two types of cementum (cellular cementum and acellular extrinsic fibre cementum) is regulated on the growing root surface was tested using bisphosphonate-affected teeth of young rats and guinea pigs. The animals were injected subcutaneously with 8 or 10 mg P x kg body weight(-1) x day(-1) of 1-hydroxyethylidene-1,1-bisphosphonate (HEBP) for 1 or 2 weeks. In rat molars, HEBP prevented mineralization of newly formed root dentin matrix and totally inhibited de novo deposition of acellular extrinsic fibre cementum. Instead, thick cellular cementum was induced on the non-mineralized root dentin surface, irrespective of the position of the root. In both animals, cellular cementum was also induced on the non-mineralized surface of root analogue dentin in HEBP-affected incisors, where only acellular extrinsic fibre cementum is deposited under normal conditions. In normal rat molars, dentin sialoprotein (DSP) was concentrated along the dentin-cellular cementum border, but not that of dentin and acellular extrinsic fibre cementum. In HEBP-affected rat incisors, DSP was shown to penetrate through the non-mineralized dentin into the surrounding tissues, but not through the mineralized portions. These data suggest that, at the site of cellular cementum formation, putative inducing factors for cellular cementum might diffuse into the periodontal space through the newly deposited mantle dentin matrix before it is mineralized. At earlier stages of root formation, mantle dentin might mineralize more promptly not to allow such diffusion. The timing of mineralization of mantle dentin matrix might be the key determinant of the types of the cementum deposited on the growing root surface. PMID:14756246

  17. G-Guidance Interface Design for Small Body Mission Simulation

    NASA Technical Reports Server (NTRS)

    Acikmese, Behcet; Carson, John; Phan, Linh

    2008-01-01

    The G-Guidance software implements a guidance and control (G and C) algorithm for small-body, autonomous proximity operations, developed under the Small Body GN and C task at JPL. The software is written in Matlab and interfaces with G-OPT, a JPL-developed optimization package written in C that provides G-Guidance with guaranteed convergence to a solution in a finite computation time with a prescribed accuracy. The resulting program is computationally efficient and is a prototype of an onboard, real-time algorithm for autonomous guidance and control. Two thruster firing schemes are available in G-Guidance, allowing tailoring of the software for specific mission maneuvers. For example, descent, landing, or rendezvous benefit from a thruster firing at the maneuver termination to mitigate velocity errors. Conversely, ascent or separation maneuvers benefit from an immediate firing to avoid potential drift toward a second body. The guidance portion of this software explicitly enforces user-defined control constraints and thruster silence times while minimizing total fuel usage. This program is currently specialized to small-body proximity operations, but the underlying method can be generalized to other applications.

  18. On the evolution of shape in N-body simulations

    NASA Astrophysics Data System (ADS)

    Theis, Ch.; Spurzem, R.

    1999-01-01

    A database on shape evolution of direct N-body models formed out of cold, dissipationless collapse is generated using GRAPE and HARP special purpose computers. Such models are important to understand the formation of elliptical galaxies. Three dynamically distinct phases of shape evolution were found, first a fast dynamical collapse which gives rise to the radial orbit instability (ROI) and generates at its end the maximal triaxiality of the system. Subsequently, two phases of violent and two-body shape relaxation occur, which drive the system first towards axisymmetry, finally to spherical symmetry (the final state, however, is still much more concentrated than the initial model). In a sequence of models the influence of numerical and physical parameters, like particle number, softening, initial virial ratio, timestep choice, different N-body codes, are examined. We find that an improper combination of softening and particle number can produce erroneous results. Selected models were evolved on the secular timescale until they became spherically symmetric again. The secular shape relaxation time scale is shown to agree very well with the two-body relaxation time, if softening is properly taken into account for the latter. Finally, we argue, that the intermediate phase of violent shape relaxation after collapse is induced by strong core oscillations in the centre, which cause potential fluctuations, dampening out the triaxiality.

  19. Turbofan flowfield simulation using Euler equations with body forces

    NASA Technical Reports Server (NTRS)

    Pankajakshan, Ramesh; Arabshahi, Abdollah; Whitfield, David L.

    1993-01-01

    A method for flow computations around ducted propfans is presented. The approach is to use the body force terms in the three-dimensional Euler equations to model the propeller. Numerical solutions are compared with experimental data for three ducted propfan configurations for different flow conditions.

  20. Cosmological N-body simulations with suppressed variance

    NASA Astrophysics Data System (ADS)

    Angulo, Raul E.; Pontzen, Andrew

    2016-10-01

    We present and test a method that dramatically reduces variance arising from the sparse sampling of wavemodes in cosmological simulations. The method uses two simulations which are fixed (the initial Fourier mode amplitudes are fixed to the ensemble average power spectrum) and paired (with initial modes exactly out of phase). We measure the power spectrum, monopole and quadrupole redshift-space correlation functions, halo mass function and reduced bispectrum at z = 1. By these measures, predictions from a fixed pair can be as precise on non-linear scales as an average over 50 traditional simulations. The fixing procedure introduces a non-Gaussian correction to the initial conditions; we give an analytic argument showing why the simulations are still able to predict the mean properties of the Gaussian ensemble. We anticipate that the method will drive down the computational time requirements for accurate large-scale explorations of galaxy bias and clustering statistics, and facilitating the use of numerical simulations in cosmological data interpretation.

  1. Cardiovascular model for the simulation of exercise, lower body negative pressure, and tilt experiments

    NASA Technical Reports Server (NTRS)

    Croston, R. C.; Fitzjerrell, D. G.

    1974-01-01

    A mathematical model and digital computer simulation of the human cardiovascular system and its controls have been developed to simulate pulsatile dynamic responses to the cardiovascular experiments of the Skylab missions and to selected physiological stresses of manned space flight. Specific model simulations of the bicycle ergometry, lower body negative pressure, and tilt experiments have been developed and verified for 1-g response by comparison with available experimental data. The zero-g simulations of two Skylab experiments are discussed.

  2. The Million-Body Problem: Particle Simulations in Astrophysics

    ScienceCinema

    Rasio, Fred [Northwestern University

    2016-07-12

    Computer simulations using particles play a key role in astrophysics. They are widely used to study problems across the entire range of astrophysical scales, from the dynamics of stars, gaseous nebulae, and galaxies, to the formation of the largest-scale structures in the universe. The 'particles' can be anything from elementary particles to macroscopic fluid elements, entire stars, or even entire galaxies. Using particle simulations as a common thread, this talk will present an overview of computational astrophysics research currently done in our theory group at Northwestern. Topics will include stellar collisions and the gravothermal catastrophe in dense star clusters.

  3. Moving body overset grid methods for complete aircraft tiltrotor simulations

    NASA Technical Reports Server (NTRS)

    Meakin, Robert L.

    1993-01-01

    A hypothetical, but realistic, set of flight conditions for the V-22 aircraft is established to facilitate rigorous testing of a new domain connectivity algorithm, and to carry out an overset grid proof-of-concept tiltrotor simulation. Relative motion and interference effects between the V-22 airframe and rotor-blades are directly simulated within the context of an unsteady, thin-layer Navier-Stokes computation. The domain connectivity algorithm is verified to perform at rates equal to or greater than those realized previously for store-separation-like applications. The feasibility of carrying out unsteady Navier-Stokes analyses of rotorcraft problems is demonstrated.

  4. The representation of self reported affect in body posture and body posture simulation.

    PubMed

    Grammer, Karl; Fink, Bernhard; Oberzaucher, Elisabeth; Atzmüller, Michaela; Blantar, Ines; Mitteroecker, Philipp

    2004-01-01

    It is taken for granted that the non-verbal information we acquire from a person's body posture and position affects our perception of others. However, to date human postures have never been described on an empirical level. This study is the first approach to tackle the unexplored topic of human postures. We combined two approaches: traditional behavior observation and modern anthropometric analysis. Photographs of 100 participants were taken, their body postures were transferred to a three dimensional virtual environment and the occurring body angles were measured. The participants were asked to fill in a questionnaire about their current affective state. A principal component analysis with the items of the affect questionnaire (Positive Negative Affect Scales, PANAS) revealed five main factors: aversion, openness, irritation, happiness, and self-confidence. The body angles were then regressed on these factors and the respective postures were reconstructed within a virtual environment. 50 different subjects rated the reconstructed postures from the positive and negative end of the regression. We found the ratings to be valid and accurate in respect to the five factors. PMID:15571090

  5. Analytical stability and simulation response study for a coupled two-body system

    NASA Technical Reports Server (NTRS)

    Tao, K. M.; Roberts, J. R.

    1975-01-01

    An analytical stability study and a digital simulation response study of two connected rigid bodies are documented. Relative rotation of the bodies at the connection is allowed, thereby providing a model suitable for studying system stability and response during a soft-dock regime. Provisions are made of a docking port axes alignment torque and a despin torque capability for encountering spinning payloads. Although the stability analysis is based on linearized equations, the digital simulation is based on nonlinear models.

  6. Preparation of many-body states for quantum simulation

    NASA Astrophysics Data System (ADS)

    Ward, Nicholas J.; Kassal, Ivan; Aspuru-Guzik, Alán

    2009-05-01

    While quantum computers are capable of simulating many quantum systems efficiently, the simulation algorithms must begin with the preparation of an appropriate initial state. We present a method for generating physically relevant quantum states on a lattice in real space. In particular, the present algorithm is able to prepare general pure and mixed many-particle states of any number of particles. It relies on a procedure for converting from a second-quantized state to its first-quantized counterpart. The algorithm is efficient in that it operates in time that is polynomial in all the essential descriptors of the system, the number of particles, the resolution of the lattice, and the inverse of the maximum final error. This scaling holds under the assumption that the wave function to be prepared is bounded or its indefinite integral is known and that the Fock operator of the system is efficiently simulatable.

  7. Modeling and Simulation of Anchoring Processess for Small Body Exploration

    NASA Technical Reports Server (NTRS)

    Quadrelli, Marco B.; Mazahar, Hammad; Negrut, Dan

    2012-01-01

    This paper describes recent work done in modeling and simulation of anchoring processes in granular media, with applications to anchoring on a Near Earth Object (NEO), where the forces due to interactions with the regolith are much stronger than the local surface gravity field. This effort is part of a larger systems engineering capability developed at JPL to answer key questions, validate requirements, conduct key system and mission trades,and evaluate performance and risk related to NEO operations for any proposed human or robotic missions to a NEO.

  8. Simulations of Bluff Body Flow Interaction for Noise Source Modeling

    NASA Technical Reports Server (NTRS)

    Khorrami, Medi R.; Lockard David P.; Choudhari, Meelan M.; Jenkins, Luther N.; Neuhart, Dan H.; McGinley, Catherine B.

    2006-01-01

    The current study is a continuation of our effort to characterize the details of flow interaction between two cylinders in a tandem configuration. This configuration is viewed to possess many of the pertinent flow features of the highly interactive unsteady flow field associated with the main landing gear of large civil transports. The present effort extends our previous two-dimensional, unsteady, Reynolds Averaged Navier-Stokes computations to three dimensions using a quasilaminar, zonal approach, in conjunction with a two-equation turbulence model. Two distinct separation length-to-diameter ratios of L/D = 3.7 and 1.435, representing intermediate and short separation distances between the two cylinders, are simulated. The Mach 0.166 simulations are performed at a Reynolds number of Re = 1.66 105 to match the companion experiments at NASA Langley Research Center. Extensive comparisons with the measured steady and unsteady surface pressure and off-surface particle image velocimetry data show encouraging agreement. Both prominent and some of the more subtle trends in the mean and fluctuating flow fields are correctly predicted. Both computations and the measured data reveal a more robust and energetic shedding process at L/D = 3.7 in comparison with the weaker shedding in the shorter separation case of L/D = 1.435. The vortex shedding frequency based on the computed surface pressure spectra is in reasonable agreement with the measured Strouhal frequency.

  9. A simple model simulating a fan as a source of axial and circumferential body forces

    SciTech Connect

    Tzanos, C. P.; Chien, T. H.

    2002-07-01

    This software can be used in a computational fluids dynamics (CFD) code to represent a fan as a source of axial and circumferential body forces. The combined software can be used effectively in car design analyses that involve many underhood thermal management simulations. FANMOD uses as input the rotational speed of the fan, geometric fan data, and the lift and drag coefficients of the blades, and predicts the body forces generated by the fan in the axial and circumferential directions. These forces can be used as momentum forces in a CFD code to simulate the effect of the fan in an underhood thermal management simulation.

  10. A simple model simulating a fan as a source of axial and circumferential body forces

    2002-07-01

    This software can be used in a computational fluids dynamics (CFD) code to represent a fan as a source of axial and circumferential body forces. The combined software can be used effectively in car design analyses that involve many underhood thermal management simulations. FANMOD uses as input the rotational speed of the fan, geometric fan data, and the lift and drag coefficients of the blades, and predicts the body forces generated by the fan inmore » the axial and circumferential directions. These forces can be used as momentum forces in a CFD code to simulate the effect of the fan in an underhood thermal management simulation.« less

  11. Direct numerical simulation of rigid bodies in multiphase flow within an Eulerian framework

    NASA Astrophysics Data System (ADS)

    Rauschenberger, P.; Weigand, B.

    2015-06-01

    A new method is presented to simulate rigid body motion in the Volume-of-Fluid based multiphase code Free Surface 3D. The specific feature of the new method is that it works within an Eulerian framework without the need for a Lagrangian representation of rigid bodies. Several test cases are shown to prove the validity of the numerical scheme. The technique is able to conserve the shape of arbitrarily shaped rigid bodies and predict terminal velocities of rigid spheres. The instability of a falling ellipsoid is captured. Multiple rigid bodies including collisions may be considered using only one Volume-of-Fluid variable which allows to simulate the drafting, kissing and tumbling phenomena of two rigid spheres. The method can easily be extended to rigid bodies undergoing phase change processes.

  12. Air/helium ground-test simulation pertinent to the definition of slender body hypersonic aerodynamics

    NASA Technical Reports Server (NTRS)

    Woods, W. C.; Thompson, R. A.

    1993-01-01

    The capability of air/helium simulations pertinent to the definition of slender body hypersonic aerodynamics is tested, using exact inviscid analytical comparisons to characterize the Mach number and bluntness effects. Comparisons are made with experiments conducted from the 1960s through the 1980s. The results indicate no general rule for air/helium simulation. A feasibility for obtaining sufficient simulation for many types of aero/fluid dynamic studies is demonstrated.

  13. Direct numerical simulations of the turbulent wake of an axisymmetric body

    NASA Technical Reports Server (NTRS)

    Riley, J. J.; Metcalfe, R. W.

    1979-01-01

    The paper presents comparisons of results of direct numerical simulations of turbulence with both laboratory data and self-similarity theory for the case of the turbulent wakes of towed, axisymmetric bodies. In general, the agreement of the simulation results with both the laboratory data and the self-similarity theory is good, although the comparisons are hampered by inadequate procedures for initializing the numerical simulations.

  14. BIOCOMPATIBILITY OF ACELLULAR DERMAL MATRIX GRAFT EVALUATED IN CULTURE OF MURINE MACROPHAGES

    PubMed Central

    Vendramini, Ana Paula; Melo, Rafaela Fernanda; Marcantonio, Rosemary Adriana Chiérici; Carlos, Iracilda Zepone

    2006-01-01

    The acellular dermal matrix allograft has been used as an alternative to autogenous palatal mucosal graft. The aim of this study was the evaluation of the biocompatibility of an acellular dermal matrix (AlloDerm®) in culture of macrophages. For hydrogen peroxidase determination we used the method of Pick & Kesari, and the Griess method for nitric oxide determination,. Statistical analysis showed no significant difference (p ≤ 0,05) in the release of nitric oxide and hydrogen peroxide by the macrophages exposed to acellular dermal matrix and the negative control. The results suggest that acellular dermal matrix did not activate the cell inflammatory response. PMID:19089033

  15. Infection in the Nasal Tip Caused by Acellular Dermal Matrix.

    PubMed

    Lee, Kun Hee

    2015-12-01

    A 19-year-old female patient visited our clinic for rhinoplasty. She complained about her low take-off point, which was apparent in profile view, and wanted slight tip projection. She refused additional cartilage harvesting from ears or ribs but consented to the use of homologous tissue, including acellular dermal matrix, for her dorsum and tip. Septoturbinoplasty was performed, and only a very small amount of septal cartilage could be harvested. It was used as both the columellar strut and the alar rim graft. Nasal dorsum and tip were augmented with acellular dermal matrix. Three months postoperatively, she experienced a few episodes of edema and redness on her nasal tip, followed by pus exudation from the nasal skin. Six months postoperatively, she underwent revision rhinoplasty for removal of inflamed grafts, and onlay tip graft with homologous rib cartilage was performed. Nasal dorsum or tip grafts are an integral part of Asian rhinoplasty. Autogenous tissue is the gold standard for grafting materials. However, the limited availability of autogenous tissue and the preference of patients and surgeons for artificial surgical implants make Asian rhinoplasty challenging. Unavailability of autogenous cartilage and patient refusal of artificial implants led to the use of acellular dermal matrix (ADM) in the nasal dorsum and tip for this case. This is the first report of postoperative complication because of infection rather than absorption after ADM use.

  16. Infection in the Nasal Tip Caused by Acellular Dermal Matrix.

    PubMed

    Lee, Kun Hee

    2015-12-01

    A 19-year-old female patient visited our clinic for rhinoplasty. She complained about her low take-off point, which was apparent in profile view, and wanted slight tip projection. She refused additional cartilage harvesting from ears or ribs but consented to the use of homologous tissue, including acellular dermal matrix, for her dorsum and tip. Septoturbinoplasty was performed, and only a very small amount of septal cartilage could be harvested. It was used as both the columellar strut and the alar rim graft. Nasal dorsum and tip were augmented with acellular dermal matrix. Three months postoperatively, she experienced a few episodes of edema and redness on her nasal tip, followed by pus exudation from the nasal skin. Six months postoperatively, she underwent revision rhinoplasty for removal of inflamed grafts, and onlay tip graft with homologous rib cartilage was performed. Nasal dorsum or tip grafts are an integral part of Asian rhinoplasty. Autogenous tissue is the gold standard for grafting materials. However, the limited availability of autogenous tissue and the preference of patients and surgeons for artificial surgical implants make Asian rhinoplasty challenging. Unavailability of autogenous cartilage and patient refusal of artificial implants led to the use of acellular dermal matrix (ADM) in the nasal dorsum and tip for this case. This is the first report of postoperative complication because of infection rather than absorption after ADM use. PMID:26894006

  17. Simulation and study of stratified flows around finite bodies

    NASA Astrophysics Data System (ADS)

    Gushchin, V. A.; Matyushin, P. V.

    2016-06-01

    The flows past a sphere and a square cylinder of diameter d moving horizontally at the velocity U in a linearly density-stratified viscous incompressible fluid are studied. The flows are described by the Navier-Stokes equations in the Boussinesq approximation. Variations in the spatial vortex structure of the flows are analyzed in detail in a wide range of dimensionless parameters (such as the Reynolds number Re = Ud/ ν and the internal Froude number Fr = U/( Nd), where ν is the kinematic viscosity and N is the buoyancy frequency) by applying mathematical simulation (on supercomputers of Joint Supercomputer Center of the Russian Academy of Sciences) and three-dimensional flow visualization. At 0.005 < Fr < 100, the classification of flow regimes for the sphere (for 1 < Re < 500) and for the cylinder (for 1 < Re < 200) is improved. At Fr = 0 (i.e., at U = 0), the problem of diffusion-induced flow past a sphere leading to the formation of horizontal density layers near the sphere's upper and lower poles is considered. At Fr = 0.1 and Re = 50, the formation of a steady flow past a square cylinder with wavy hanging density layers in the wake is studied in detail.

  18. Unsteady transonic flow simulation on a full-span-wing-body configuration

    NASA Technical Reports Server (NTRS)

    Guruswamy, Guru P.; Goorjian, Peter M.

    1987-01-01

    The presence of a body influences both the aerodynamic and aeroelastic performance of wings. Such effects are more pronounced in the transonic regime. To accurately account for the effect of the body, particularly when the wings are experiencing asymmetric modal motions, it is necessary to model the full configuration in the nonlinear transonic regime. In this study, full-span-wing-body configurations are simulated for the first time by a theoretical method that uses the unsteady potential equations based on the small-disturbance theory. The body geometry is modeled exactly as the physical shape, instead of as a rectangular box, which has been done in the past. Steady pressure computations for wing-body configurations compare well with the available experimental data. Unsteady pressure computations when the wings are oscillating in asymmetric modes show significant influence of the body.

  19. Porcine acellular lung matrix for wound healing and abdominal wall reconstruction: A pilot study.

    PubMed

    Fernandez-Moure, Joseph S; Van Eps, Jeffrey L; Rhudy, Jessica R; Cabrera, Fernando J; Acharya, Ghanashyam S; Tasciotti, Ennio; Sakamoto, Jason; Nichols, Joan E

    2016-01-01

    Surgical wound healing applications require bioprosthetics that promote cellular infiltration and vessel formation, metrics associated with increased mechanical strength and resistance to infection. Porcine acellular lung matrix is a novel tissue scaffold known to promote cell adherence while minimizing inflammatory reactions. In this study, we evaluate the capacity of porcine acellular lung matrix to sustain cellularization and neovascularization in a rat model of subcutaneous implantation and chronic hernia repair. We hypothesize that, compared to human acellular dermal matrix, porcine acellular lung matrix would promote greater cell infiltration and vessel formation. Following pneumonectomy, porcine lungs were processed and characterized histologically and by scanning electron microscopy to demonstrate efficacy of the decellularization. Using a rat model of subcutaneou implantation, porcine acellular lung matrices (n = 8) and human acellular dermal matrices (n = 8) were incubated in vivo for 6 weeks. To evaluate performance under mechanically stressed conditions, porcine acellular lung matrices (n = 7) and human acellular dermal matrices (n = 7) were implanted in a rat model of chronic ventral incisional hernia repair for 6 weeks. After 6 weeks, tissues were evaluated using hematoxylin and eosin and Masson's trichrome staining to quantify cell infiltration and vessel formation. Porcine acellular lung matrices were shown to be successfully decellularized. Following subcutaneous implantation, macroscopic vessel formation was evident. Porcine acellular lung matrices demonstrated sufficient incorporation and showed no evidence of mechanical failure after ventral hernia repair. Porcine acellular lung matrices demonstrated significantly greater cellular density and vessel formation when compared to human acellular dermal matrix. Vessel sizes were similar across all groups. Cell infiltration and vessel formation are well-characterized metrics of incorporation

  20. Porcine acellular lung matrix for wound healing and abdominal wall reconstruction: A pilot study

    PubMed Central

    Fernandez-Moure, Joseph S; Van Eps, Jeffrey L; Rhudy, Jessica R; Cabrera, Fernando J; Acharya, Ghanashyam S; Tasciotti, Ennio; Sakamoto, Jason; Nichols, Joan E

    2016-01-01

    Surgical wound healing applications require bioprosthetics that promote cellular infiltration and vessel formation, metrics associated with increased mechanical strength and resistance to infection. Porcine acellular lung matrix is a novel tissue scaffold known to promote cell adherence while minimizing inflammatory reactions. In this study, we evaluate the capacity of porcine acellular lung matrix to sustain cellularization and neovascularization in a rat model of subcutaneous implantation and chronic hernia repair. We hypothesize that, compared to human acellular dermal matrix, porcine acellular lung matrix would promote greater cell infiltration and vessel formation. Following pneumonectomy, porcine lungs were processed and characterized histologically and by scanning electron microscopy to demonstrate efficacy of the decellularization. Using a rat model of subcutaneou implantation, porcine acellular lung matrices (n = 8) and human acellular dermal matrices (n = 8) were incubated in vivo for 6 weeks. To evaluate performance under mechanically stressed conditions, porcine acellular lung matrices (n = 7) and human acellular dermal matrices (n = 7) were implanted in a rat model of chronic ventral incisional hernia repair for 6 weeks. After 6 weeks, tissues were evaluated using hematoxylin and eosin and Masson’s trichrome staining to quantify cell infiltration and vessel formation. Porcine acellular lung matrices were shown to be successfully decellularized. Following subcutaneous implantation, macroscopic vessel formation was evident. Porcine acellular lung matrices demonstrated sufficient incorporation and showed no evidence of mechanical failure after ventral hernia repair. Porcine acellular lung matrices demonstrated significantly greater cellular density and vessel formation when compared to human acellular dermal matrix. Vessel sizes were similar across all groups. Cell infiltration and vessel formation are well-characterized metrics of incorporation

  1. Numerical simulation of tidal evolution of a viscoelastic body modelled with a mass-spring network

    NASA Astrophysics Data System (ADS)

    Frouard, Julien; Quillen, Alice C.; Efroimsky, Michael; Giannella, David

    2016-05-01

    We use a damped mass-spring model within an N-body code to simulate the tidal evolution of the spin and orbit of a self-gravitating viscoelastic spherical body moving around a point-mass perturber. The damped mass-spring model represents a Kelvin-Voigt viscoelastic solid. We measure the tidal quality function (the dynamical Love number k2 divided by the tidal quality factor Q) from the numerically computed tidal drift of the semimajor axis of the binary. The shape of k2/Q, as a function of the principal tidal frequency, reproduces the kink shape predicted by Efroimsky for the tidal response of near-spherical homogeneous viscoelastic rotators. We demonstrate that we can directly simulate the tidal evolution of spinning viscoelastic objects. In future, the mass-spring N-body model can be generalized to inhomogeneous and/or non-spherical bodies.

  2. 2HOT: An Improved Parallel Hashed Oct-Tree N-Body Algorithm for Cosmological Simulation

    DOE PAGES

    Warren, Michael S.

    2014-01-01

    We report on improvements made over the past two decades to our adaptive treecode N-body method (HOT). A mathematical and computational approach to the cosmological N-body problem is described, with performance and scalability measured up to 256k (2 18 ) processors. We present error analysis and scientific application results from a series of more than ten 69 billion (4096 3 ) particle cosmological simulations, accounting for 4×10 20 floating point operations. These results include the first simulations using the new constraints on the standard model of cosmology from the Planck satellite. Our simulations set a new standard for accuracymore » and scientific throughput, while meeting or exceeding the computational efficiency of the latest generation of hybrid TreePM N-body methods.« less

  3. Multibody Simulation Software Testbed for Small-Body Exploration and Sampling

    NASA Technical Reports Server (NTRS)

    Acikmese, Behcet; Blackmore, James C.; Mandic, Milan

    2011-01-01

    G-TAG is a software tool for the multibody simulation of a spacecraft with a robotic arm and a sampling mechanism, which performs a touch-and-go (TAG) maneuver for sampling from the surface of a small celestial body. G-TAG utilizes G-DYN, a multi-body simulation engine described in the previous article, and interfaces to controllers, estimators, and environmental forces that affect the spacecraft. G-TAG can easily be adapted for the analysis of the mission stress cases to support the design of a TAG system, as well as for comprehensive Monte Carlo simulations to analyze and evaluate a particular TAG system design. Any future small-body mission will benefit from using G-TAG, which has already been extensively used in Comet Odyssey and Galahad Asteroid New Frontiers proposals.

  4. Monte Carlo simulation of efficient data acquisition for an entire-body PET scanner

    NASA Astrophysics Data System (ADS)

    Isnaini, Ismet; Obi, Takashi; Yoshida, Eiji; Yamaya, Taiga

    2014-07-01

    Conventional PET scanners can image the whole body using many bed positions. On the other hand, an entire-body PET scanner with an extended axial FOV, which can trace whole-body uptake images at the same time and improve sensitivity dynamically, has been desired. The entire-body PET scanner would have to process a large amount of data effectively. As a result, the entire-body PET scanner has high dead time at a multiplex detector grouping process. Also, the entire-body PET scanner has many oblique line-of-responses. In this work, we study an efficient data acquisition for the entire-body PET scanner using the Monte Carlo simulation. The simulated entire-body PET scanner based on depth-of-interaction detectors has a 2016-mm axial field-of-view (FOV) and an 80-cm ring diameter. Since the entire-body PET scanner has higher single data loss than a conventional PET scanner at grouping circuits, the NECR of the entire-body PET scanner decreases. But, single data loss is mitigated by separating the axially arranged detector into multiple parts. Our choice of 3 groups of axially-arranged detectors has shown to increase the peak NECR by 41%. An appropriate choice of maximum ring difference (MRD) will also maintain the same high performance of sensitivity and high peak NECR while at the same time reduces the data size. The extremely-oblique line of response for large axial FOV does not contribute much to the performance of the scanner. The total sensitivity with full MRD increased only 15% than that with about half MRD. The peak NECR was saturated at about half MRD. The entire-body PET scanner promises to provide a large axial FOV and to have sufficient performance values without using the full data.

  5. Simulations of dipolar fluids using effective many-body isotropic interactions.

    PubMed

    Sindt, Julien O; Camp, Philip J

    2015-07-14

    The partition function of a system with pairwise-additive anisotropic dipole-dipole interactions is equal to that of a hypothetical system with many-body isotropic interactions [G. Stell, Phys. Rev. Lett. 32, 286 (1974)]. The effective many-body interactions contain n-body contributions of all orders. Each contribution is known as an expansion in terms of the particle-particle distances r, and the coefficients are temperature dependent. The leading-order two-body term is the familiar -r(-6) attraction, and the leading-order three-body term is equivalent to the Axilrod-Teller interaction. In this work, a fluid of particles with the leading-order two-body and three-body interactions is compared to an equivalent dipolar soft-sphere fluid. Molecular simulations are used to determine the conditions under which the effective many-body interactions reproduce the fluid-phase structures of the dipolar system. The effective many-body interaction works well at moderately high temperatures but fails at low temperatures where particle chaining is expected to occur. It is shown that an adjustment of the coefficients of the two-body and three-body terms leads to a good description of the structure of the dipolar fluid even in the chaining regime, due primarily to the ground-state linear configuration of the three-body Axilrod-Teller interaction. The vapor-liquid phase diagrams of systems with different Axilrod-Teller contributions are determined. As the strength of the three-body interaction is increased, the critical temperature and density both decrease and disappear completely above a threshold strength, where chaining eventually suppresses the condensation transition. PMID:26178112

  6. Advanced Line Die Forming Simulation Technology and Its Impact on Stamping Automotive Body Panels

    NASA Astrophysics Data System (ADS)

    Zhang, Jimmy; Wang, Chuantao; Xu, Siguang; Joshi, Ramesh; Goan, Norman

    2005-08-01

    Line die forming simulation and validation create tremendous business values for automotive die developments and production stamping while they pose a great technological challenge to stamping CAE community. GM Manufacturing Engineering Die Center has developed an integrated line die analysis technology to validate die lines as a productionized business process. In this process, a finished stamping body panel can be streamline analyzed with required time, accuracy, and quality. This paper presents critical issues in line die analysis, discusses technical challenges in production applications and software development, and finally demonstrates the impact of line die forming simulation and validations on automotive body styling and tooling developments.

  7. Theory of stellar population synthesis with an application to N-body simulations

    NASA Astrophysics Data System (ADS)

    Pasetto, S.; Chiosi, C.; Kawata, D.

    2012-09-01

    Aims: We present here a new theoretical approach to population synthesis. The aim is to predict colour magnitude diagrams (CMDs) for huge numbers of stars. With this method we generate synthetic CMDs for N-body simulations of galaxies. Sophisticated hydrodynamic N-body models of galaxies require equal quality simulations of the photometric properties of their stellar content. The only prerequisite for the method to work is very little information on the star formation and chemical enrichment histories, i.e. the age and metallicity of all star-particles as a function of time. The method takes into account the gap between the mass of real stars and that of the star-particles in N-body simulations, which best correspond to the mass of star clusters with different age and metallicity, i.e. a manifold of single stellar sopulations (SSP). Methods: The theory extends the concept of SSP to include the phase-space (position and velocity) of each star. Furthermore, it accelerates the building up of simulated CMD by using a database of theoretical SSPs that extends to all ages and metallicities of interest. Finally, it uses the concept of distribution functions to build up the CMD. The technique is independent of the mass resolution and the way the N-body simulation has been calculated. This allows us to generate CMDs for simulated stellar systems of any kind: from open clusters to globular clusters, dwarf galaxies, or spiral and elliptical galaxies. Results: The new theory is applied to an N-body simulation of a disc galaxy to test its performance and highlight its flexibility.

  8. A generic multi-flex-body dynamics, controls simulation tool for space station

    NASA Technical Reports Server (NTRS)

    London, Ken W.; Lee, John F.; Singh, Ramen P.; Schubele, Buddy

    1991-01-01

    An order (n) multiflex body Space Station simulation tool is introduced. The flex multibody modeling is generic enough to model all phases of Space Station from build up through to Assembly Complete configuration and beyond. Multibody subsystems such as the Mobile Servicing System (MSS) undergoing a prescribed translation and rotation are also allowed. The software includes aerodynamic, gravity gradient, and magnetic field models. User defined controllers can be discrete or continuous. Extensive preprocessing of 'body by body' NASTRAN flex data is built in. A significant aspect, too, is the integrated controls design capability which includes model reduction and analytic linearization.

  9. Robotic simulation of flexible-body spacecraft dynamics in a satellite servicing testbed

    NASA Astrophysics Data System (ADS)

    Brannan, Justin Cory

    Satellite failures that once led to end-of-life may eventually be addressed using robotic servicing platforms. The ability to model and simulate the physical interaction between two free-floating spacecraft is a key aspect of robotic servicing, and understanding how large appendages such as solar panels, antenna arrays and booms affect the combined system dynamics may be critical to mission operations. This research presents a model of the coupled rigid- and flexible-body satellite dynamics that can be implemented on a robotic satellite simulator. The coupled dynamics are validated against a commercially available dynamics software package, and robot hardware-in-the-loop tests are conducted to demonstrate how the dynamics model is able to predict the response of a robot mass simulator outfitted with physical appendages. Through both validation efforts, a flexible-body simulation is developed to observe the resulting dynamics of a given satellite system on-orbit.

  10. A method of generating initial conditions for cosmological N-body simulations

    SciTech Connect

    Joyce, M.; Levesque, D.; Marcos, B.

    2005-11-15

    We investigate the possibility of generating initial conditions for cosmological N-body simulations by simulating a system whose correlations at thermal equilibrium approximate well those of cosmological density perturbations. The system is an appropriately modified version of the standard 'one component plasma' (OCP). We show first how a well-known semianalytic method can be used to determine the potential required to produce the desired correlations, and then verify our results for some cosmological type spectra with simulations of the full molecular dynamics. The advantage of the method, compared to the standard one, is that it gives by construction an accurate representation of both the real and reciprocal space correlation properties of the theoretical model. Furthermore the distributions are also statistically homogeneous and isotropic. We discuss briefly the modifications needed to implement the method to produce configurations appropriate for large N-body simulations in cosmology, and also the generation of initial velocities in this context.

  11. Fast Generation of Ensembles of Cosmological N-Body Simulations via Mode-Resampling

    SciTech Connect

    Schneider, M D; Cole, S; Frenk, C S; Szapudi, I

    2011-02-14

    We present an algorithm for quickly generating multiple realizations of N-body simulations to be used, for example, for cosmological parameter estimation from surveys of large-scale structure. Our algorithm uses a new method to resample the large-scale (Gaussian-distributed) Fourier modes in a periodic N-body simulation box in a manner that properly accounts for the nonlinear mode-coupling between large and small scales. We find that our method for adding new large-scale mode realizations recovers the nonlinear power spectrum to sub-percent accuracy on scales larger than about half the Nyquist frequency of the simulation box. Using 20 N-body simulations, we obtain a power spectrum covariance matrix estimate that matches the estimator from Takahashi et al. (from 5000 simulations) with < 20% errors in all matrix elements. Comparing the rates of convergence, we determine that our algorithm requires {approx}8 times fewer simulations to achieve a given error tolerance in estimates of the power spectrum covariance matrix. The degree of success of our algorithm indicates that we understand the main physical processes that give rise to the correlations in the matter power spectrum. Namely, the large-scale Fourier modes modulate both the degree of structure growth through the variation in the effective local matter density and also the spatial frequency of small-scale perturbations through large-scale displacements. We expect our algorithm to be useful for noise modeling when constraining cosmological parameters from weak lensing (cosmic shear) and galaxy surveys, rescaling summary statistics of N-body simulations for new cosmological parameter values, and any applications where the influence of Fourier modes larger than the simulation size must be accounted for.

  12. The modeling of the whole human body and the simulations of the waveguide intra-body communication by using the finite-element method

    NASA Astrophysics Data System (ADS)

    Song, Yong; Chu, Yingfang; Zhang, Kai; Kang, Bangzhi; Hao, Qun

    2010-11-01

    The simulation based on the finite-element (FE) method plays an important role in the investigation of the intra-body communication (IBC). In this paper, the method for modeling the whole human body based on the finite-element method is proposed, while a finite-element model of the whole human body used for the simulations of the waveguide intra-body communication has been developed. Finally, the simulations of the waveguide IBC with different signal transmission paths have been achieved by using the developed finite-element model. Moreover, both the potential distributions and the signal attenuations of the simulation results are discussed in detail, which indicate that the proposed method and model offer the significant advantages in the theoretical analysis and the system design of the waveguide intra-body communication.

  13. Block Time Step Storage Scheme for Astrophysical N-body Simulations

    NASA Astrophysics Data System (ADS)

    Cai, Maxwell Xu; Meiron, Yohai; Kouwenhoven, M. B. N.; Assmann, Paulina; Spurzem, Rainer

    2015-08-01

    Astrophysical research in recent decades has made significant progress thanks to the availability of various N-body simulation techniques. With the rapid development of high-performance computing technologies, modern simulations have been able to use the computing power of massively parallel clusters with more than 105 GPU cores. While unprecedented accuracy and dynamical scales have been achieved, the enormous amount of data being generated continuously poses great challenges for the subsequent procedures of data analysis and archiving. In this paper, we propose an adaptive storage scheme for simulation data, inspired by the block time step (BTS) integration scheme found in a number of direct N-body integrators available nowadays, as an urgent response to these challenges. The proposed scheme, namely, the BTS storage scheme, works by minimizing the data redundancy by assigning individual output frequencies to the data as required by the researcher. As demonstrated by benchmarks, the proposed scheme is applicable to a wide variety of simulations. Despite the main focus of developing a solution for direct N-body simulation data, the methodology is transferable for grid-based or tree-based simulations where hierarchical time stepping is used.

  14. Phase II trial of whole-cell pertussis vaccine vs an acellular vaccine containing agglutinogens.

    PubMed

    Miller, E; Ashworth, L A; Robinson, A; Waight, P A; Irons, L I

    1991-01-12

    An acellular pertussis vaccine containing agglutinogens 2 and 3, pertussis toxin, and filamentous haemagglutinin was developed by the Centre for Applied Microbiology and Research in the UK. 188 infants were entered into a randomised blind trial and received either the acellular or a whole-cell vaccine, combined with diphtheria and tetanus toxoids, in a 3, 5, and 8-10 month schedule. Local reactions were similar in the two groups but significantly fewer infants had systemic symptoms after the acellular vaccine. Mean log-antibody titres to the agglutinogen and toxin components were higher with the acellular than with the whole-cell vaccine. Persistence of antibodies one year after the third dose was also better in the acellular group. PMID:1670725

  15. The Rufous Hummingbird in hovering flight -- full-body 3D immersed boundary simulation

    NASA Astrophysics Data System (ADS)

    Ferreira de Sousa, Paulo; Luo, Haoxiang; Bocanegra Evans, Humberto

    2009-11-01

    Hummingbirds are an interesting case study for the development of micro-air vehicles since they combine the high flight stability of insects with the low metabolic power per unit of body mass of bats, during hovering flight. In this study, simulations of a full-body hummingbird in hovering flight were performed at a Reynolds number around 3600. The simulations employ a versatile sharp-interface immersed boundary method recently enhanced at our lab that can treat thin membranes and solid bodies alike. Implemented on a Cartesian mesh, the numerical method allows us to capture the vortex dynamics of the wake accurately and efficiently. The whole-body simulation will allow us to clearly identify the three general patterns of flow velocity around the body of the hummingbird referred in Altshuler et al. (Exp Fluids 46 (5), 2009). One focus of the current study is to understand the interaction between the wakes of the two wings at the end of the upstroke, and how the tail actively defects the flow to contribute to pitch stability. Another focus of the study will be to identify the pair of unconnected loops underneath each wing.

  16. Whooping cough, twenty years from acellular vaccines introduction.

    PubMed

    Greco, D; Esposito, S; Tozzi, A; Pandolfi, E; Icardi, G; Giammanco, A

    2015-01-01

    Clinical pertussis resulting from infection with B. pertussis is a significant medical and public health problem, despite the huge success of vaccination that has greatly reduced its incidence. The whole cell vaccine had an undeniable success over the last 50 years, but its acceptance was strongly inhibited by fear, only partially justified, of severe side effects, but also, in the Western world, by the difficulty to enter in combination with other vaccines: today multi-vaccine formulations are essential to maintain a high vaccination coverage. The advent of acellular vaccines was greeted with enthusiasm by the public health world: in the Nineties, several controlled vaccine trials were carried out: they demonstrated a high safety and good efficacy of new vaccines. In fact, in the Western world, the acellular vaccines completely replaced the whole cells ones. In the last years, ample evidence on the variety of protection of these vaccines linked to the presence of different antigens of Bordetella pertussis was collected. It also became clear that the protection provided, on average around 80%, leaves every year a significant cohort of vaccinated susceptible even in countries with a vaccination coverage of 95%, such as Italy. Finally, it was shown that, as for the pertussis disease, protection decreases over time, to leave a proportion of adolescents and adults unprotected. Waiting for improved pertussis vaccines, the disease control today requires a different strategy that includes a booster at 5 years for infants, but also boosters for teenagers and young adults, re-vaccination of health care personnel, and possibly of pregnant women and of those who are in contact with infants (cocooning). Finally, the quest for better vaccines inevitably tends towards pertussis acellular vaccines with at least three components, which have demonstrated superior effectiveness and have been largely in use in Italy for fifteen years.

  17. Advances in Chimera Grid Tools for Multi-Body Dynamics Simulations and Script Creation

    NASA Technical Reports Server (NTRS)

    Chan, William M.

    2004-01-01

    This viewgraph presentation contains information about (1) Framework for multi-body dynamics - Geometry Manipulation Protocol (GMP), (2) Simulation procedure using Chimera Grid Tools (CGT) and OVERFLOW-2 (3) Further recent developments in Chimera Grid Tools OVERGRID, Grid modules, Script library and (4) Future work.

  18. Dynamic Simulation and Static Matching for Action Prediction: Evidence from Body Part Priming

    ERIC Educational Resources Information Center

    Springer, Anne; Brandstadter, Simone; Prinz, Wolfgang

    2013-01-01

    Accurately predicting other people's actions may involve two processes: internal real-time simulation (dynamic updating) and matching recently perceived action images (static matching). Using a priming of body parts, this study aimed to differentiate the two processes. Specifically, participants played a motion-controlled video game with…

  19. RAY-RAMSES: a code for ray tracing on the fly in N-body simulations

    NASA Astrophysics Data System (ADS)

    Barreira, Alexandre; Llinares, Claudio; Bose, Sownak; Li, Baojiu

    2016-05-01

    We present a ray tracing code to compute integrated cosmological observables on the fly in AMR N-body simulations. Unlike conventional ray tracing techniques, our code takes full advantage of the time and spatial resolution attained by the N-body simulation by computing the integrals along the line of sight on a cell-by-cell basis through the AMR simulation grid. Moroever, since it runs on the fly in the N-body run, our code can produce maps of the desired observables without storing large (or any) amounts of data for post-processing. We implemented our routines in the RAMSES N-body code and tested the implementation using an example of weak lensing simulation. We analyse basic statistics of lensing convergence maps and find good agreement with semi-analytical methods. The ray tracing methodology presented here can be used in several cosmological analysis such as Sunyaev-Zel'dovich and integrated Sachs-Wolfe effect studies as well as modified gravity. Our code can also be used in cross-checks of the more conventional methods, which can be important in tests of theory systematics in preparation for upcoming large scale structure surveys.

  20. On the inadequacies of current multi-flexible body simulation codes

    NASA Technical Reports Server (NTRS)

    Eke, Fidelis O.; Laskin, Robert A.

    1987-01-01

    DISCOS was used to simulate the spin-up of a uniform flexible beam mounted on a rigid spinning disk. The system operated well for the first few seconds but then there was a drastic rise in deflection as the whole system became unstable. Attention is given to the reason for the breakdown of DISCOS and how this affects the simulation results from DISCOS and other multiflexible-body simulation programs. It is found that a formulation option already available in DISCOS will eliminate the dramatic divergence observed in high spin regimes and give good results in low spin regimes while requiring highly simplified input data.

  1. Three-body interactions in complex fluids: Virial coefficients from simulation finite-size effects

    SciTech Connect

    Ashton, Douglas J.; Wilding, Nigel B.

    2014-06-28

    A simulation technique is described for quantifying the contribution of three-body interactions to the thermodynamical properties of coarse-grained representations of complex fluids. The method is based on a new approach for determining virial coefficients from the measured volume-dependent asymptote of a certain structural function. By comparing the third virial coefficient B{sub 3} for a complex fluid with that of an approximate coarse-grained model described by a pair potential, three body effects can be quantified. The strategy is applicable to both Molecular Dynamics and Monte Carlo simulation. Its utility is illustrated via measurements of three-body effects in models of star polymers and in highly size-asymmetrical colloid-polymer mixtures.

  2. Simulation and Analyses of Multi-Body Separation in Launch Vehicle Staging Environment

    NASA Technical Reports Server (NTRS)

    Pamadi, Bandu N.; Hotchko, Nathaniel J.; Samareh, Jamshid; Covell, Peter F.; Tartabini, Paul V.

    2006-01-01

    The development of methodologies, techniques, and tools for analysis and simulation of multi-body separation is critically needed for successful design and operation of next generation launch vehicles. As a part of this activity, ConSep simulation tool is being developed. ConSep is a generic MATLAB-based front-and-back-end to the commercially available ADAMS. solver, an industry standard package for solving multi-body dynamic problems. This paper discusses the 3-body separation capability in ConSep and its application to the separation of the Shuttle Solid Rocket Boosters (SRBs) from the External Tank (ET) and the Orbiter. The results are compared with STS-1 flight data.

  3. Random genetic simulation of the internal geometry of deltaic sand bodies

    SciTech Connect

    Hu, L.Y. ); Joseph, P. ); Dubrule, O. )

    1994-12-01

    A new stochastic approach for modeling the internal geometry of deltaic sand bodies is presented that incorporates both genetic (or process-based) and geometric aspects. The genetic aspect takes geologic concepts into account, whereas the geometric aspect reduces the number of parameters for use in applications. Sand-body models resulting from this method honor the well data. This approach is applied to model the internal architecture of an Eocene deltaic sand-body outcropping near Roda, Spain. The simulations using a few wells are compared with the geologic reference model obtained using all the outcrop and log data. The sensitivity of the simulation results is also checked with respect to the fluctuation of the input parameters.

  4. Stellar evolution in N-body simulations of disk galaxies. I

    NASA Technical Reports Server (NTRS)

    Comins, N. F.

    1983-01-01

    The Kalnajs (1972, 1976) Omega models of global mass and velocity distributions are employed in the present two-dimensional N-body simulation, which allows for a spectrum of particle masses, stellar explosions, explosion remnant interactions with an interstellar medium, and the creation of new stars from the gas. Two sequences of runs using the Omega values of 0.8 and 0.9 examine the separate and combined effects of particle mass distribution, the gravitational influence of an interstellar gas distribution on the N-body particles, and stellar evolution, allowing for stellar explosions and star formation from the gas. It is found that both Omega values' nonequilibrium results dramatically change when evolution is allowed to occur. These results call for more realistic coupled N-body and evolution simulations in order to improve the understanding of disk galaxy evolution.

  5. Global High-resolution N-body Simulation of Planet Formation. I. Planetesimal-driven Migration

    NASA Astrophysics Data System (ADS)

    Kominami, J. D.; Daisaka, H.; Makino, J.; Fujimoto, M.

    2016-03-01

    We investigated whether outward planetesimal-driven migration (PDM) takes place or not in simulations when the self-gravity of planetesimals is included. We performed N-body simulations of planetesimal disks with a large width (0.7-4 au) that ranges over the ice line. The simulations consisted of two stages. The first-stage simulations were carried out to see the runaway growth phase using the planetesimals of initially the same mass. The runaway growth took place both at the inner edge of the disk and at the region just outside the ice line. This result was utilized for the initial setup of the second-stage simulations, in which the runaway bodies just outside the ice line were replaced by the protoplanets with about the isolation mass. In the second-stage simulations, the outward migration of the protoplanet was followed by the stopping of the migration due to the increase of the random velocity of the planetesimals. Owing to this increase of random velocities, one of the PDM criteria derived in Minton & Levison was broken. In the current simulations, the effect of the gas disk is not considered. It is likely that the gas disk plays an important role in PDM, and we plan to study its effect in future papers.

  6. GalevNB: a conversion from N-body simulations to observations

    NASA Astrophysics Data System (ADS)

    Pang, Xiao-Ying; Olczak, Christoph; Guo, Di-Feng; Spurzem, Rainer; Kotulla, Ralf

    2016-03-01

    We present GalevNB (Galev for N-body simulations), a utility that converts fundamental stellar properties of N-body simulations into observational properties using the GALEV (GAlaxy EVolutionary synthesis models) package, and allowing direct comparisons between observations and N-body simulations. It works by converting fundamental stellar properties, such as stellar mass, temperature, luminosity and metallicity into observational magnitudes for a variety of filters used by mainstream instruments/telescopes, such as HST, ESO, SDSS, 2MASS, etc., and into spectra that span the range from far-UV (90 Å) to near-IR (160 μm). As an application, we use GalevNB to investigate the secular evolution of the spectral energy distribution (SED) and color magnitude diagram (CMD) of a simulated star cluster over a few hundred million years. With the results given by GalevNB we discover a UV-excess in the SED of the cluster over the whole simulation time. We also identify four candidates that contribute to the FUV peak: core helium burning stars, second asymptotic giant branch (AGB) stars, white dwarfs and naked helium stars.

  7. On the simulation of indistinguishable fermions in the many-body Wigner formalism

    SciTech Connect

    Sellier, J.M. Dimov, I.

    2015-01-01

    The simulation of quantum systems consisting of interacting, indistinguishable fermions is an incredible mathematical problem which poses formidable numerical challenges. Many sophisticated methods addressing this problem are available which are based on the many-body Schrödinger formalism. Recently a Monte Carlo technique for the resolution of the many-body Wigner equation has been introduced and successfully applied to the simulation of distinguishable, spinless particles. This numerical approach presents several advantages over other methods. Indeed, it is based on an intuitive formalism in which quantum systems are described in terms of a quasi-distribution function, and highly scalable due to its Monte Carlo nature. In this work, we extend the many-body Wigner Monte Carlo method to the simulation of indistinguishable fermions. To this end, we first show how fermions are incorporated into the Wigner formalism. Then we demonstrate that the Pauli exclusion principle is intrinsic to the formalism. As a matter of fact, a numerical simulation of two strongly interacting fermions (electrons) is performed which clearly shows the appearance of a Fermi (or exchange–correlation) hole in the phase-space, a clear signature of the presence of the Pauli principle. To conclude, we simulate 4, 8 and 16 non-interacting fermions, isolated in a closed box, and show that, as the number of fermions increases, we gradually recover the Fermi–Dirac statistics, a clear proof of the reliability of our proposed method for the treatment of indistinguishable particles.

  8. Cosmological N-body Simulation of Galaxy and Large-Scale Structure Formation: The Gravity Frontier

    NASA Astrophysics Data System (ADS)

    Klypin, Anatoly

    2015-04-01

    One of the first N-body simulations done almost 50 years ago had only 200 self-gravitating particles. Even this first baby step made substantial impact on understanding how astronomical objects should form. Now powerful supercomputers and new algorithms allow astronomers produce N-body simulations that employ up to a trillion dark matter particles and produce vital theoretical predictions regarding formation, evolution, structure and statistics of objects ranging from dwarf galaxies to clusters and superclusters of galaxies. With only gravity involved in these theoretical models, one would naively expect that by now we should know everything we need about N-body dynamics of cosmological fluctuations. Not the case. It appears that the Universe was not cooperative and gave us divergencies in the initial conditions generated during the Inflation epoch and subsequent expansion of the Universe - the infinite phase-space density and divergent density fluctuations. Ever increasing observational demands on statistics and accuracy of theoretical predictions is another driving force for more realistic and larger N-body simulations. Large current and new planned observational projects such as BOSS, eBOSS, Euclid, LSST will bring information on spatial distribution, motion, and properties of millions of galaxies at different redshifts. Direct simulations of evolution of gas and formation of stars for millions of forming galaxies will not be available for years leaving astronomers with the only option - to develop methods to combine large N-body simulations with models of galaxy formation to produce accurate theoretical predictions. I will discuss the current status of the field and directions of its development.

  9. Flow Simulation of N3-X Hybrid Wing-Body Configuration

    NASA Technical Reports Server (NTRS)

    Kim, Hyoungjin; Liou, Meng-Sing

    2013-01-01

    System studies show that a N3-X hybrid wing-body aircraft with a turboelectric distributed propulsion system using a mail-slot inlet/nozzle nacelle can meet the environmental and performance goals for N+3 generation transports (three generations beyond the current air transport technology level) set by NASA s Subsonic Fixed Wing Project. In this study, a Navier-Stokes flow simulation of N3-X on hybrid unstructured meshes was conducted, including the mail-slot propulsor. The geometry of the mail-slot propulsor was generated by a CAD (Computer-Aided Design)-free shape parameterization. A body force approach was used for a more realistic and efficient simulation of the turning and loss effects of the fan blades and the inlet-fan interactions. Flow simulation results of the N3-X demonstrates the validity of the present approach.

  10. Particle-Based Simulation of Shock-Induced Deformation of Elastic Bodies

    NASA Astrophysics Data System (ADS)

    Sakamura, Y.; Sugimoto, T.; Nakayama, K.

    Shock-induced deformations of solid bodies are of practical interest to those who are concerned with explosive processing of materials, demolition of buildings, precautions against accidental explosions, etc. In order to simulate the shock-induced deformations of solid bodies, a large number of numerical codes based on continuum mechanics, which are called hydrocodes, have been developed so far [1, 2]. When the amount of deformation is relatively small, Lagrangian hydrocodes have been used to simulate the dynamic response of shock-loaded materials. When the deformation is large, Eulerian hydrocodes have been utilized instead. This is because the computational grids distorted along with the deformation of materials in the Lagrangian approach make the simulations either inaccurate or unstable, while the Eulerian approach where grids are fixed in space can handle such large deformations of materials. On the contrary, material interfaces that are precisely defined in the Lagrangian approach are not traced exactly in the Eulerian one.

  11. On computing stress in polymer systems involving multi-body potentials from molecular dynamics simulation.

    PubMed

    Fu, Yao; Song, Jeong-Hoon

    2014-08-01

    Hardy stress definition has been restricted to pair potentials and embedded-atom method potentials due to the basic assumptions in the derivation of a symmetric microscopic stress tensor. Force decomposition required in the Hardy stress expression becomes obscure for multi-body potentials. In this work, we demonstrate the invariance of the Hardy stress expression for a polymer system modeled with multi-body interatomic potentials including up to four atoms interaction, by applying central force decomposition of the atomic force. The balance of momentum has been demonstrated to be valid theoretically and tested under various numerical simulation conditions. The validity of momentum conservation justifies the extension of Hardy stress expression to multi-body potential systems. Computed Hardy stress has been observed to converge to the virial stress of the system with increasing spatial averaging volume. This work provides a feasible and reliable linkage between the atomistic and continuum scales for multi-body potential systems.

  12. Photoabsorption spectra of argon cation clusters: Monte Carlo simulations using many-body polarization

    NASA Astrophysics Data System (ADS)

    Gascon, Jose A.; Hall, Randall W.

    2000-11-01

    A simple, semiempirical model that includes many-body polarization is used to study the ground and excited state properties of ArN+ clusters (N=3-23) at 80 K. For purposes of comparison, a model that does not include many-body polarization is used to study clusters with N=3-27. Monte Carlo simulations are used to calculate the average properties of these clusters. The model is similar to one previously used to study argon cation clusters without many-body polarization. The photoabsorption spectrum is in good agreement with experiment; in particular, the photoabsorption spectra for cluster sizes 4-10 do not show the blueshift that is seen with models that do not include many-body polarization.

  13. On computing stress in polymer systems involving multi-body potentials from molecular dynamics simulation

    SciTech Connect

    Fu, Yao E-mail: jhsong@cec.sc.edu; Song, Jeong-Hoon E-mail: jhsong@cec.sc.edu

    2014-08-07

    Hardy stress definition has been restricted to pair potentials and embedded-atom method potentials due to the basic assumptions in the derivation of a symmetric microscopic stress tensor. Force decomposition required in the Hardy stress expression becomes obscure for multi-body potentials. In this work, we demonstrate the invariance of the Hardy stress expression for a polymer system modeled with multi-body interatomic potentials including up to four atoms interaction, by applying central force decomposition of the atomic force. The balance of momentum has been demonstrated to be valid theoretically and tested under various numerical simulation conditions. The validity of momentum conservation justifies the extension of Hardy stress expression to multi-body potential systems. Computed Hardy stress has been observed to converge to the virial stress of the system with increasing spatial averaging volume. This work provides a feasible and reliable linkage between the atomistic and continuum scales for multi-body potential systems.

  14. Computational modelling of string body interaction for the violin family and simulation of wolf notes

    NASA Astrophysics Data System (ADS)

    Inácio, O.; Antunes, J.; Wright, M. C. M.

    2008-02-01

    Most theoretical studies of bowed-string instruments deal with isolated strings, pinned on fixed supports. In others, the instrument body dynamics have been accounted by using extremely simplified models of the string-body interaction through the instrument bridge. Such models have, nevertheless, been instrumental to the understanding of a very common and musically undesirable phenomenon known as the wolf note—a strong beating interplay between string and body vibrations. Cellos, bad and good, are particularly prone to this problem. In previous work, a computational method that allows efficient time-domain modelling of bowed strings based on a modal approach has been introduced. This has been extended to incorporate the complex dynamics of real-life instrument bodies, and their coupling to the string motions, using experimental dynamical body data. The string is modelled using its unconstrained modes, assuming pinned-pinned boundary conditions at the tailpiece and the nut. At the intermediary bridge location, the string-body coupling is enforced using the body impulse-response or modal data, as measured at the instrument bridge. In the present paper, this computational approach is applied to a specific cello, which provided experimental wolf-behaviour data under several bowing conditions, as well as laboratory measurements of the bridge impulse responses on which the numerical simulations were based. Interesting aspects of the string-body dynamical responses are highlighted by numerical simulations and the corresponding sounds and animations produced. Finally, a qualitative (and, when possible, quantitative) comparison of the experimental and numerical results is presented.

  15. The Impact of Initial Conditions in N-Body Simulations of Debris Discs

    NASA Astrophysics Data System (ADS)

    Thilliez, E.; Maddison, S. T.

    2015-10-01

    Numerical simulations are a crucial tool to understand the relationship between debris discs and planetary companions. As debris disc observations are now reaching unprecedented levels of precision over a wide range of wavelengths, an appropriate level of accuracy and consistency is required in numerical simulations to confidently interpret this new generation of observations. However, simulations throughout the literature have been conducted with various initial conditions often with little or no justification. In this paper, we aim to study the dependence on the initial conditions of N-body simulations modelling the interaction between a massive and eccentric planet on an exterior debris disc. To achieve this, we first classify three broad approaches used in the literature and provide some physical context for when each category should be used. We then run a series of N-body simulations, that include radiation forces acting on small grains, with varying initial conditions across the three categories. We test the influence of the initial parent body belt width, eccentricity, and alignment with the planet on the resulting debris disc structure and compare the final peak emission location, disc width and offset of synthetic disc images produced with a radiative transfer code. We also track the evolution of the forced eccentricity of the dust grains induced by the planet, as well as resonance dust trapping. We find that an initially broad parent body belt always results in a broader debris disc than an initially narrow parent body belt. While simulations with a parent body belt with low initial eccentricity (e ~ 0) and high initial eccentricity (0 < e < 0.3) resulted in similar broad discs, we find that purely secular forced initial conditions, where the initial disc eccentricity is set to the forced value and the disc is aligned with the planet, always result in a narrower disc. We conclude that broad debris discs can be modelled by using either a dynamically cold

  16. An efficient algorithm for fully resolved simulation of freely swimming bodies

    NASA Astrophysics Data System (ADS)

    Shirgaonkar, Anup; Patankar, Neelesh; Maciver, Malcolm

    2007-11-01

    There is a need to better understand the physical principles underlying the extraordinary mobility of swimming and flying animals. To that end, we present a fully resolved simulation scheme for aquatic locomotion that is sufficiently general to potentially function for small flying animals as well. The method combines the rigid particulate scheme of Patankar et al. (IJMF, 2001) with a momentum redistribution scheme to consistently solve for fluid-body forces as well as the swimming velocity. The input to the algorithm is the deforming motion of the fish body or its fins in the frame of reference of the fish. The method is designed to be efficient, parallelizable, and can be easily implemented into existing fluid dynamics codes. We demonstrate that the new method is capable of simulating variety of fish forms including flexible bodies such as an eel, or bodies with flexible fins attached to them such as the blackghost knifefish (Apteronotus albifrons). Insights into the hydrodynamics of aquatic locomotion based on our simulations will be summarized. The proposed technique is also applicable to variety of problems such as designing underwater vehicles, neuromechanical modeling, understanding the role of hydrodynamics on the evolution of fish forms, and animation.

  17. Preclinical evaluations of acellular biological conduits for peripheral nerve regeneration

    PubMed Central

    Liao, I-Chien; Wan, Hua; Qi, Shijie; Cui, Cunqi; Patel, Paarun; Sun, Wendell

    2013-01-01

    Various types of natural biological conduits have been investigated as alternatives to the current surgical standard approach for peripheral nerve injuries. Autologous nerve graft, the current gold standard for peripheral nerve damage, is limited by clinical challenges such as donor-site morbidity and limited availability. The purpose of this study was to evaluate the efficacy of using acellular xenographic conduits (nerve, artery, and dermis) for the repair of a 1.2 cm critical size defect of peripheral nerve in a rodent model. Four months post surgery, the animal group receiving acellular artery as a nerve conduit showed excellent physiological outcome in terms of the prevention of muscle atrophy and foot ulcer. Histological assessment of the bridged site revealed excellent axon regeneration, as opposed to the nonrepaired control group or the group receiving dermal conduit. Finally, the study evaluated the potential improvement via the addition of undifferentiated mesenchymal stem cells into the artery conduit during the bridging procedure. The mesenchymal stem cell–dosed artery conduit group resulted in significantly higher concentration of regenerated axons over artery conduit alone, and exhibited accelerated muscle atrophy rescue. Our results demonstrated that xenographic artery conduits promoted excellent axonal regeneration with highly promising clinical relevance. PMID:23532671

  18. Multilayered implantation using acellular dermal matrix into nude mice.

    PubMed

    Lee, Dong Won; Lee, Myung Chul; Roh, Hyun; Lee, Won Jai

    2014-12-01

    Soft tissue augmentation using acellular dermal matrix has gained popularity to overcome the shortcomings of autogenous and alloplastic materials. Sometimes it needs multilayered stacking to obtain enough volume. In this study, we investigated the efficacy of multilayered implantation using acellular dermal matrix (MatriDerm(®)) for soft tissue augmentation. MatriDerm was implanted subdermally on each side of the dorsum of nude mice (n = 20), stacked two layers thick in the control group and three layers thick in the experimental group. Alterations of thickness, degree of angiogenesis, and collagen and elastin fiber syntheses were observed over 40 days. Three-layered implantation with MatriDerm maintained its volume similarly as in two-layered implantation, although the thickness decreased after 30 days in both groups. At the early stage of implantation, angiogenesis and collagen and elastin fiber syntheses occurred fluently on the central portion, which is the farthest away from the surface in contact with the host tissue. Collagen and elastin fibers became more concentrated over time, and the original structure of MatriDerm could not be maintained due to being replaced with newly formed collagen and elastin fibers 40 days after implantation. Multilayered implantation with MatriDerm is considered appropriate for tissue ingrowth and can be used as a substitute for soft tissue augmentation.

  19. Acellular dermal matrices in breast reconstructions - a literature review.

    PubMed

    Skovsted Yde, Simon; Brunbjerg, Mette Eline; Damsgaard, Tine Engberg

    2016-08-01

    During the last two decades, acellular dermal matrices (ADM) have been more widely used in reconstructive procedures i.e. breast reconstructions. Several, both synthetic and biologic products derived from human, porcine and bovine tissue, have been introduced. Until this point postoperative complications for the acellular dermal matrices, as a group, have been the main focus. The purpose of this literature review is to summarize the current knowledge on the each biologic product used in breast reconstructions, including product specific complication frequencies. A systematic search of the literature was performed in the PubMed and EMBASE databases, identifying 55 relevant articles, mainly evidence level III. AlloDerm seems to be associated with severe complicating matters in the reconstructive process compared to other products. This could be due to the higher number of investigating studies relative to the others. The surgical area faces certain challenges comparing results, due to surgical variance, the data collection and follow-up. More well-defined guidelines and more high-evidence randomized studies could increase the overall level of evidence in this area. PMID:26881927

  20. RANS Simulation of the Heave Response of a Two-Body Floating Point Wave Absorber: Preprint

    SciTech Connect

    Yu, Y.; Li, Y.

    2011-03-01

    A preliminary study on a two-body floating wave absorbers is presented in this paper. A Reynolds-Averaged Navier-Stokes computational method is applied for analyzing the hydrodynamic heave response of the absorber in operational wave conditions. The two-body floating wave absorber contains a float section and a submerged reaction section. For validation purposes, our model is first assumed to be locked. The two sections are forced to move together with each other. The locked single body model is used in a heave decay test, where the RANS result is validated with the experimental measurement. For the two-body floating point absorber simulation, the two sections are connected through a mass-spring-damper system, which is applied to simulate the power take-off mechanism under design wave conditions. Overall, the details of the flow around the absorber and its nonlinear interaction with waves are investigated, and the power absorption efficiency of the two-body floating wave absorber in waves with a constant value spring-damper system is examined.

  1. Structure overset grid method and its applications to simulation of multi-body separation

    NASA Astrophysics Data System (ADS)

    Zhang, HaiRui; Fan, JingJing; Yuan, Wu; Zhang, WeiHua

    2015-09-01

    This paper proposes an automatic structure overset grid method, which utilizes the hole-surface optimization with one-step searching, wall-surface grid oversetting, and dynamic overset grid approaches to achieve the high adaptability of overset grids for complex multi-body aircrafts. Specifically, based on the automatic structure overset grids, the method first solves the coupling of Navier-Stokes (N-S) unsteady flow equation and 6DOF motion equation, and establishes the multi-body collision model. Then, the numerical simulation of unsteady flow for complex aircrafts' multi-body separation, the simulation of multi-body separating trajectory and the separation safety analysis are accomplished. Thus, the method can properly handle practical engineering problems including the wing/drop tank separation, aircraft/mount separation, and cluster bomb projection. Experiments show that our numerical results match well with experimental results, which demonstrates the effectiveness of our methods in solving the multi-body separation problem for aircrafts with complex shapes.

  2. Numerical simulation of a moving rigid body in a rarefied gas

    NASA Astrophysics Data System (ADS)

    Shrestha, Samir; Tiwari, Sudarshan; Klar, Axel; Hardt, Steffen

    2015-07-01

    In this paper we present a numerical scheme to simulate a moving rigid body with arbitrary shape suspended in a rarefied gas. The rarefied gas is simulated by solving the Boltzmann equation using a DSMC particle method. The motion of the rigid body is governed by the Newton-Euler equations, where the force and the torque on the rigid body are computed from the momentum transfer of the gas molecules colliding with the body. On the other hand, the motion of the rigid body influences the gas flow in its surroundings. We validate the numerical scheme by considering a moving piston problem in 1D and the Einstein relation for Brownian motion of the suspended particle in 3D. In the piston problem it is shown that the equilibrium position of the moving piston converges to the analytical solution for a wide range of Knudsen numbers. In the case of Brownian motion the translational as well as the rotational degrees of freedom are taken into account. In this case it is shown that the numerically computed translational and rotational diffusion coefficients converge to the theoretical values. Finally, the motion of an object of complex shape under the influence of a thermophoretic force is investigated.

  3. A three body dynamic simulation of a seated tractor rocket escape system for the Space Shuttle

    NASA Technical Reports Server (NTRS)

    Ondler, R. M.

    1989-01-01

    In the tractor-rocket seated-extraction candidate system for Space Shuttle Orbiter crew escape, the crewmember is pulled from his seat and away from the Orbiter via an elastic pendant, using a system of rails to guide the extraction trajectory through an opening on the window frame for flight deck crew and through the side hatch for the middeck crew. A three-body simulation has been developed to model the flight-mechanics aspects of the concept, where the three bodies are the astronaut (six DOF), the tractor rocket (six DOF), and the Shuttle Orbiter (three DOF); attention is given to crewmembers' clearance of the Orbiter structure and engine plumes.

  4. Direct simulation Monte Carlo and Navier-Stokes simulations of blunt body wake flows

    NASA Astrophysics Data System (ADS)

    Moss, James N.; Mitcheltree, Robert A.; Dogra, Virendra K.; Wilmoth, Richard G.

    1994-07-01

    Numerical results obtained with direct simulation Monte Carlo and Navier-Stokes methods are presented for a Mach-20 nitrogen flow about a 70-deg blunted cone. The flow conditions simulated are those that can be obtained in existing low-density hypersonic wind tunnels. Three sets of flow conditions are considered with freestream Knudsen numbers ranging from 0.03 to 0.001. The focus is on the wake structure: how the wake structure changes as a function of rare faction, what the afterbody levels of heating are, and to what limits the continuum models are realistic as rarefunction in the wake is progressively increased. Calculations are made with and without an afterbody sting. Results for the afterbody sting are emphasized in anticipation of an experimental study for the current flow conditions and model configuration. The Navier-Stokes calculations were made with and without slip boundary conditions. Comparisons of the results obtained with the two simulation methodologies are made for both flowfield structure and surface quantities.

  5. Direct simulation Monte Carlo and Navier-Stokes simulations of blunt body wake flows

    NASA Technical Reports Server (NTRS)

    Moss, James N.; Mitcheltree, Robert A.; Dogra, Virendra K.; Wilmoth, Richard G.

    1994-01-01

    Numerical results obtained with direct simulation Monte Carlo and Navier-Stokes methods are presented for a Mach-20 nitrogen flow about a 70-deg blunted cone. The flow conditions simulated are those that can be obtained in existing low-density hypersonic wind tunnels. Three sets of flow conditions are considered with freestream Knudsen numbers ranging from 0.03 to 0.001. The focus is on the wake structure: how the wake structure changes as a function of rare faction, what the afterbody levels of heating are, and to what limits the continuum models are realistic as rarefunction in the wake is progressively increased. Calculations are made with and without an afterbody sting. Results for the afterbody sting are emphasized in anticipation of an experimental study for the current flow conditions and model configuration. The Navier-Stokes calculations were made with and without slip boundary conditions. Comparisons of the results obtained with the two simulation methodologies are made for both flowfield structure and surface quantities.

  6. Towards Interactive Medical Content Delivery Between Simulated Body Sensor Networks and Practical Data Center.

    PubMed

    Shi, Xiaobo; Li, Wei; Song, Jeungeun; Hossain, M Shamim; Mizanur Rahman, Sk Md; Alelaiwi, Abdulhameed

    2016-10-01

    With the development of IoT (Internet of Thing), big data analysis and cloud computing, traditional medical information system integrates with these new technologies. The establishment of cloud-based smart healthcare application gets more and more attention. In this paper, semi-physical simulation technology is applied to cloud-based smart healthcare system. The Body sensor network (BSN) of system transmit has two ways of data collection and transmission. The one is using practical BSN to collect data and transmitting it to the data center. The other is transmitting real medical data to practical data center by simulating BSN. In order to transmit real medical data to practical data center by simulating BSN under semi-physical simulation environment, this paper designs an OPNET packet structure, defines a gateway node model between simulating BSN and practical data center and builds a custom protocol stack. Moreover, this paper conducts a large amount of simulation on the real data transmission through simulation network connecting with practical network. The simulation result can provides a reference for parameter settings of fully practical network and reduces the cost of devices and personnel involved. PMID:27562482

  7. Towards Interactive Medical Content Delivery Between Simulated Body Sensor Networks and Practical Data Center.

    PubMed

    Shi, Xiaobo; Li, Wei; Song, Jeungeun; Hossain, M Shamim; Mizanur Rahman, Sk Md; Alelaiwi, Abdulhameed

    2016-10-01

    With the development of IoT (Internet of Thing), big data analysis and cloud computing, traditional medical information system integrates with these new technologies. The establishment of cloud-based smart healthcare application gets more and more attention. In this paper, semi-physical simulation technology is applied to cloud-based smart healthcare system. The Body sensor network (BSN) of system transmit has two ways of data collection and transmission. The one is using practical BSN to collect data and transmitting it to the data center. The other is transmitting real medical data to practical data center by simulating BSN. In order to transmit real medical data to practical data center by simulating BSN under semi-physical simulation environment, this paper designs an OPNET packet structure, defines a gateway node model between simulating BSN and practical data center and builds a custom protocol stack. Moreover, this paper conducts a large amount of simulation on the real data transmission through simulation network connecting with practical network. The simulation result can provides a reference for parameter settings of fully practical network and reduces the cost of devices and personnel involved.

  8. Dynamics of the terrestrial planets from a large number of N-body simulations

    NASA Astrophysics Data System (ADS)

    Fischer, Rebecca A.; Ciesla, Fred J.

    2014-04-01

    The agglomeration of planetary embryos and planetesimals was the final stage of terrestrial planet formation. This process is modeled using N-body accretion simulations, whose outcomes are tested by comparing to observed physical and chemical Solar System properties. The outcomes of these simulations are stochastic, leading to a wide range of results, which makes it difficult at times to identify the full range of possible outcomes for a given dynamic environment. We ran fifty high-resolution simulations each with Jupiter and Saturn on circular or eccentric orbits, whereas most previous studies ran an order of magnitude fewer. This allows us to better quantify the probabilities of matching various observables, including low probability events such as Mars formation, and to search for correlations between properties. We produce many good Earth analogues, which provide information about the mass evolution and provenance of the building blocks of the Earth. Most observables are weakly correlated or uncorrelated, implying that individual evolutionary stages may reflect how the system evolved even if models do not reproduce all of the Solar System's properties at the end. Thus individual N-body simulations may be used to study the chemistry of planetary accretion as particular accretion pathways may be representative of a given dynamic scenario even if that simulation fails to reproduce many of the other observed traits of the Solar System.

  9. Turbine Powered Simulator Calibration and Testing for Hybrid Wing Body Powered Airframe Integration

    NASA Technical Reports Server (NTRS)

    Shea, Patrick R.; Flamm, Jeffrey D.; Long, Kurtis R.; James, Kevin D.; Tompkins, Daniel M.; Beyar, Michael D.

    2016-01-01

    Propulsion airframe integration testing on a 5.75% scale hybrid wing body model us- ing turbine powered simulators was completed at the National Full-Scale Aerodynamics Complex 40- by 80-foot test section. Four rear control surface con gurations including a no control surface de ection con guration were tested with the turbine powered simulator units to investigate how the jet exhaust in uenced the control surface performance as re- lated to the resultant forces and moments on the model. Compared to ow-through nacelle testing on the same hybrid wing body model, the control surface e ectiveness was found to increase with the turbine powered simulator units operating. This was true for pitching moment, lift, and drag although pitching moment was the parameter of greatest interest for this project. With the turbine powered simulator units operating, the model pitching moment was seen to increase when compared to the ow-through nacelle con guration indicating that the center elevon and vertical tail control authority increased with the jet exhaust from the turbine powered simulator units.

  10. Simulation of separated flow past a bluff body using Navier-Stokes equations

    NASA Technical Reports Server (NTRS)

    Ghia, K. N.; Ghia, U.; Osswald, G. A.; Liu, C. A.

    1987-01-01

    Two-dimensional flow past a bluff body is presently simulated on the basis of an analysis that employs the incompressible, unsteady Navier-Stokes equations in terms of vorticity and stream function. The fully implicit, time-marching, alternating-direction, implicit-block Gaussian elimination used is a direct method with second-order spatial accuracy; this allows it to avoid the introduction of any artificial viscosity. Attention is given to the simulation of flow past a circular cylinder with and without symmetry, requiring the use of either the half or the full cylinder, respectively.

  11. Flight-Simulated Launch-Pad-Abort-to-Landing Maneuvers for a Lifting Body

    NASA Technical Reports Server (NTRS)

    Jackson, E. Bruce; Rivers, Robert A.

    1998-01-01

    The results of an in-flight investigation of the feasibility of conducting a successful landing following a launch-pad abort of a vertically-launched lifting body are presented. The study attempted to duplicate the abort-to-land-ing trajectory from the point of apogee through final flare and included the steep glide and a required high-speed, low-altitude turn to the runway heading. The steep glide was flown by reference to ground-provided guidance. The low-altitude turn was flown visually with a reduced field- of-view duplicating that of the simulated lifting body. Results from the in-flight experiment are shown to agree with ground-based simulation results; however, these tests should not be regarded as a definitive due to performance and control law dissimilarities between the two vehicles.

  12. Comparative study of the biodegradability of porous silicon films in simulated body fluid.

    PubMed

    Peckham, J; Andrews, G T

    2015-01-01

    The biodegradability of oxidized microporous, mesoporous and macroporous silicon films in a simulated body fluid with ion concentrations similar to those found in human blood plasma were studied using gravimetry. Film dissolution rates were determined by periodically weighing the samples after removal from the fluid. The dissolution rates for microporous silicon were found to be higher than those for mesoporous silicon of comparable porosity. The dissolution rate of macroporous silicon was much lower than that for either microporous or mesoporous silicon. This is attributed to the fact that its specific surface area is much lower than that of microporous and mesoporous silicon. Using an equation adapted from [Surf. Sci. Lett. 306 (1994), L550-L554], the dissolution rate of porous silicon in simulated body fluid can be estimated if the film thickness and specific surface area are known.

  13. Simulation of the many-body dynamical quantum Hall effect in an optical lattice

    NASA Astrophysics Data System (ADS)

    Zhang, Dan-Wei; Yang, Xu-Chen

    2016-05-01

    We propose an experimental scheme to simulate the many-body dynamical quantum Hall effect with ultra-cold bosonic atoms in a one-dimensional optical lattice. We first show that the required model Hamiltonian of a spin-1/2 Heisenberg chain with an effective magnetic field and tunable parameters can be realized in this system. For dynamical response to ramping the external fields, the quantized plateaus emerge in the Berry curvature of the interacting atomic spin chain as a function of the effective spin-exchange interaction. The quantization of this response in the parameter space with the interaction-induced topological transition characterizes the many-body dynamical quantum Hall effect. Furthermore, we demonstrate that this phenomenon can be observed in practical cold atom experiments with numerical simulations.

  14. Effect of tube current modulation for dose estimation using a simulation tool on body CT examination.

    PubMed

    Kawaguchi, Ai; Matsunaga, Yuta; Kobayashi, Masanao; Suzuki, Shoichi; Matsubara, Kosuke; Chida, Koichi

    2015-12-01

    The purpose of this study was to evaluate the effect of tube current modulation for dose estimation of a body computed tomography (CT) examination using a simulation tool. The authors also compared longitudinal variations in tube current values between iterative reconstruction (IR) and filtered back-projection (FBP) reconstruction algorithms. One hundred patients underwent body CT examinations. The tube current values around 10 organ regions were recorded longitudinally from tube current information. The organ and effective doses were simulated by average tube current values and longitudinal modulated tube current values. The organ doses for the bladder and breast estimated by longitudinal modulated tube current values were 20 % higher and 25 % lower than those estimated using the average tube current values, respectively. The differences in effective doses were small (mean, 0.7 mSv). The longitudinal variations in tube current values were almost the same for the IR and FBP algorithms.

  15. NOVel Adaptive softening for collisionless N-body simulations: eliminating spurious haloes

    NASA Astrophysics Data System (ADS)

    Hobbs, Alexander; Read, Justin I.; Agertz, Oscar; Iannuzzi, Francesca; Power, Chris

    2016-05-01

    We describe a NOVel form of Adaptive softening (NOVA) for collisionless N-body simulations, implemented in the RAMSES adaptive mesh refinement code. In RAMSES - that we refer to as a `standard N-body method' - cells are only split if they contain more than eight particles (a mass refinement criterion). Here, we introduce an additional criterion that the particle distribution within each cell be sufficiently isotropic, as measured by the ratio of the maximum to minimum eigenvalues of its moment of inertia tensor: η = λmax/λmin. In this way, collapse is only refined if it occurs along all three axes, ensuring that the softening ɛ is always of order twice the largest interparticle spacing in a cell. This more conservative force softening criterion is designed to minimize spurious two-body effects, while maintaining high force resolution in collapsed regions of the flow. We test NOVA using an antisymmetric perturbed plane wave collapse (`Valinia' test) before applying it to warm dark matter (WDM) simulations. For the Valinia test, we show that - unlike the standard N-body method - NOVA produces no numerical fragmentation while still being able to correctly capture fine caustics and shells around the collapsing regions. For the WDM simulations, we find that NOVA converges significantly more rapidly than standard N-body, producing little or no spurious haloes on small scales. We will use NOVA in forthcoming papers to study the issue of halo formation below the free-streaming mass Mfs; filament stability; and to obtain new constraints on the temperature of dark matter.

  16. Assessment of simulated high-dose partial-body irradiation by PCC-R assay

    PubMed Central

    Romero, Ivonne; García, Omar; Lamadrid, Ana I.; Gregoire, Eric; González, Jorge E.; Morales, Wilfredo; Martin, Cécile; Barquinero, Joan-Francesc; Voisin, Philippe

    2013-01-01

    The estimation of the dose and the irradiated fraction of the body is important information in the primary medical response in case of a radiological accident. The PCC-R assay has been developed for high-dose estimations, but little attention has been given to its applicability for partial-body irradiations. In the present work we estimated the doses and the percentage of the irradiated fraction in simulated partial-body radiation exposures at high doses using the PCC-R assay. Peripheral whole blood of three healthy donors was exposed to doses from 0–20 Gy, with 60Co gamma radiation. To simulate partial body irradiations, irradiated and non-irradiated blood was mixed to obtain proportions of irradiated blood from 10–90%. Lymphocyte cultures were treated with Colcemid and Calyculin-A before harvest. Conventional and triage scores were performed for each dose, proportion of irradiated blood and donor. The Papworth's u test was used to evaluate the PCC-R distribution per cell. A dose-response relationship was fitted according to the maximum likelihood method using the frequencies of PCC-R obtained from 100% irradiated blood. The dose to the partially irradiated blood was estimated using the Contaminated Poisson method. A new D0 value of 10.9 Gy was calculated and used to estimate the initial fraction of irradiated cells. The results presented here indicate that by PCC-R it is possible to distinguish between simulated partial- and whole-body irradiations by the u-test, and to accurately estimate the dose from 10–20 Gy, and the initial fraction of irradiated cells in the interval from 10–90%. PMID:23596200

  17. Assessment of simulated high-dose partial-body irradiation by PCC-R assay.

    PubMed

    Romero, Ivonne; García, Omar; Lamadrid, Ana I; Gregoire, Eric; González, Jorge E; Morales, Wilfredo; Martin, Cécile; Barquinero, Joan-Francesc; Voisin, Philippe

    2013-09-01

    The estimation of the dose and the irradiated fraction of the body is important information in the primary medical response in case of a radiological accident. The PCC-R assay has been developed for high-dose estimations, but little attention has been given to its applicability for partial-body irradiations. In the present work we estimated the doses and the percentage of the irradiated fraction in simulated partial-body radiation exposures at high doses using the PCC-R assay. Peripheral whole blood of three healthy donors was exposed to doses from 0-20 Gy, with ⁶⁰Co gamma radiation. To simulate partial body irradiations, irradiated and non-irradiated blood was mixed to obtain proportions of irradiated blood from 10-90%. Lymphocyte cultures were treated with Colcemid and Calyculin-A before harvest. Conventional and triage scores were performed for each dose, proportion of irradiated blood and donor. The Papworth's u test was used to evaluate the PCC-R distribution per cell. A dose-response relationship was fitted according to the maximum likelihood method using the frequencies of PCC-R obtained from 100% irradiated blood. The dose to the partially irradiated blood was estimated using the Contaminated Poisson method. A new D₀ value of 10.9 Gy was calculated and used to estimate the initial fraction of irradiated cells. The results presented here indicate that by PCC-R it is possible to distinguish between simulated partial- and whole-body irradiations by the u-test, and to accurately estimate the dose from 10-20 Gy, and the initial fraction of irradiated cells in the interval from 10-90%.

  18. Positive Tensor Network Approach for Simulating Open Quantum Many-Body Systems.

    PubMed

    Werner, A H; Jaschke, D; Silvi, P; Kliesch, M; Calarco, T; Eisert, J; Montangero, S

    2016-06-10

    Open quantum many-body systems play an important role in quantum optics and condensed matter physics, and capture phenomena like transport, the interplay between Hamiltonian and incoherent dynamics, and topological order generated by dissipation. We introduce a versatile and practical method to numerically simulate one-dimensional open quantum many-body dynamics using tensor networks. It is based on representing mixed quantum states in a locally purified form, which guarantees that positivity is preserved at all times. Moreover, the approximation error is controlled with respect to the trace norm. Hence, this scheme overcomes various obstacles of the known numerical open-system evolution schemes. To exemplify the functioning of the approach, we study both stationary states and transient dissipative behavior, for various open quantum systems ranging from few to many bodies.

  19. Positive Tensor Network Approach for Simulating Open Quantum Many-Body Systems

    NASA Astrophysics Data System (ADS)

    Werner, A. H.; Jaschke, D.; Silvi, P.; Kliesch, M.; Calarco, T.; Eisert, J.; Montangero, S.

    2016-06-01

    Open quantum many-body systems play an important role in quantum optics and condensed matter physics, and capture phenomena like transport, the interplay between Hamiltonian and incoherent dynamics, and topological order generated by dissipation. We introduce a versatile and practical method to numerically simulate one-dimensional open quantum many-body dynamics using tensor networks. It is based on representing mixed quantum states in a locally purified form, which guarantees that positivity is preserved at all times. Moreover, the approximation error is controlled with respect to the trace norm. Hence, this scheme overcomes various obstacles of the known numerical open-system evolution schemes. To exemplify the functioning of the approach, we study both stationary states and transient dissipative behavior, for various open quantum systems ranging from few to many bodies.

  20. A Numerical Simulation of a Fishlike Body's Self-propelled C-start

    NASA Astrophysics Data System (ADS)

    Liu, G.; Yu, Y. L.; Tong, B. G.

    2011-09-01

    This paper presents a numerical method to deal with a two-dimensional deformable fishlike body's large deformation self-propelled swimming. Overset grids are employed to discretize the flow domain around the large deforming body which is simulated by a foil. The kinematics, energetics and the flow structures of a typical C-start are predicted by a coupling solution of the two-dimensional incompressible fluid dynamics and the deforming body dynamics. As a typical practice, the foil performs a C-start-like motion in stationary water based on the prescribed deforming mode. It is found that the locomotion of the foil is similar to a real fish's C-start and the hydrodynamic efficiency of this C-start model is about 29% which is close to the value calculated by the previous theoretical estimation. Particularly, a structure of three significant concentrated vortices is discovered in the wake.

  1. Attitude dynamics simulation subroutines for systems of hinge-connected rigid bodies

    NASA Technical Reports Server (NTRS)

    Fleischer, G. E.; Likins, P. W.

    1974-01-01

    Several computer subroutines are designed to provide the solution to minimum-dimension sets of discrete-coordinate equations of motion for systems consisting of an arbitrary number of hinge-connected rigid bodies assembled in a tree topology. In particular, these routines may be applied to: (1) the case of completely unrestricted hinge rotations, (2) the totally linearized case (all system rotations are small), and (3) the mixed, or partially linearized, case. The use of the programs in each case is demonstrated using a five-body spacecraft and attitude control system configuration. The ability of the subroutines to accommodate prescribed motions of system bodies is also demonstrated. Complete listings and user instructions are included for these routines (written in FORTRAN V) which are intended as multi- and general-purpose tools in the simulation of spacecraft and other complex electromechanical systems.

  2. Cartesian Off-Body Grid Adaption for Viscous Time- Accurate Flow Simulation

    NASA Technical Reports Server (NTRS)

    Buning, Pieter G.; Pulliam, Thomas H.

    2011-01-01

    An improved solution adaption capability has been implemented in the OVERFLOW overset grid CFD code. Building on the Cartesian off-body approach inherent in OVERFLOW and the original adaptive refinement method developed by Meakin, the new scheme provides for automated creation of multiple levels of finer Cartesian grids. Refinement can be based on the undivided second-difference of the flow solution variables, or on a specific flow quantity such as vorticity. Coupled with load-balancing and an inmemory solution interpolation procedure, the adaption process provides very good performance for time-accurate simulations on parallel compute platforms. A method of using refined, thin body-fitted grids combined with adaption in the off-body grids is presented, which maximizes the part of the domain subject to adaption. Two- and three-dimensional examples are used to illustrate the effectiveness and performance of the adaption scheme.

  3. The bar-halo interaction - II. Secular evolution and the religion of N-body simulations

    NASA Astrophysics Data System (ADS)

    Weinberg, Martin D.; Katz, Neal

    2007-02-01

    This paper explores resonance-driven secular evolution between a bar and dark matter halo using N-body simulations. We make direct comparisons to our analytic theory to demonstrate the great difficulty that an N-body simulation has representing these dynamics for realistic astronomical interactions. In a dark matter halo, the bar's angular momentum is coupled to the central density cusp (if present) by the inner Lindblad resonance. Owing to this angular momentum transfer and self-consistent re-equilibration, strong realistic bars WILL modify the cusp profile, lowering the central densities within about 30 per cent of the bar radius in a few bar orbits. Past results to the contrary may be the result of weak bars or numerical artefacts. The magnitude of the effect depends on many factors and we illustrate the sensitivity of the response to the dark matter profile, the bar shape and mass and the galaxy's evolutionary history. For example, if the bar length is comparable to the size of a central dark matter core, the bar may exchange angular momentum without changing its pattern speed significantly. We emphasize that this apparently simple example of secular evolution is remarkably subtle in detail and conclude that an N-body exploration of any astronomical scenario requires a deep investigation into the underlying dynamical mechanisms for that particular problem to set the necessary requirements for the simulation parameters and method (e.g. particle number and Poisson solver). Simply put, N-body simulations do not divinely reveal truth and hence their results are not infallible. They are unlikely to provide useful insight on their own, particularly for the study of even more complex secular processes such as the production of pseudo-bulges and disc heating.

  4. WINE-1: Special-Purpose Computer forN-Body Simulations with a Periodic Boundary Condition

    NASA Astrophysics Data System (ADS)

    Fukushige, Toshiyuki; Makino, Junichiro; Ito, Tomoyoshi; Okumura, Sachiko K.; Ebisuzaki, Toshikazu; Sugimoto, Daiichiro

    1993-06-01

    We have developed WINE-1 (Wave space INtegrator for Ewald method), a special-purpose computer for N-body simulations with a periodic boundary condition. In N-body simulations with a periodic boundary condition such as cosmological N-body simulations, we use the Ewald method to calculate the gravitational interaction. With the Ewald method, we can calculate the interaction more accurately than a calculation with other methods, such as the PM method, the P(3) M method, or the tree algorithm. In the Ewald method, the total force exerted on a particle is divided into contributions from real space and wave-number space so that the infinite sum can converge exponentially in both spaces. WINE is a special-purpose computer used to calculate the interaction in wave-number space. WINE is connected to a host computer via the VME bus. We have developed the first machine, WINE-1. It is made of one board having a size of 38 cm by 40 cm, on which 31 LSI chips and 46 IC chips are wire-wrapped. The peak speed of WINE-1 is equivalent to 480 Mflops. The summation in real space is calculated using a GRAPE system, another special-purpose computer for the direct calculation of the interparticle force. For example, we can perform a cosmological N-body simulation for N=80,000 (500 steps) within a week if we use GRAPE-2A for the summation in real space and WINE-1 for that in wave-number space.

  5. Three-dimensional finite element simulations of vertebral body thermal treatment (Invited Paper)

    NASA Astrophysics Data System (ADS)

    Ryan, Thomas P.; Patel, Samit J.; Morris, Ronit; Hoopes, P. J.; Bergeron, Jeffrey A.; Mahajan, Roop

    2005-04-01

    Lower back pain affects a large group of people worldwide and when in its early stages, has no viable interventional treatment. In order to avoid the eventuality of an invasive surgical procedure, which is further down the Care Pathway, an interventional treatment that is minimally invasive and arrests the patient's pain would be of tremendous clinical benefit. There is a hypothesis that if the basivertebral nerve in the vertebral body is defunctionalized, lower back pain may be lessened. To further investigate creating a means to provide localized thermal therapy, bench and animal studies were planned, but to help select the applicator configuration and placement, numerical modeling studies were undertaken. A 3D finite element model was utilized to predict the electric field pattern and power deposition pattern of radiofrequency (RF) based electrodes. Three types of tissues were modeled: 1) porcine (ex-vivo), ovine (in-vivo preclinical), and 3) human (ex-vivo, in-vivo). Two types of RF devices were simulated: 1) a pair of converging, hollow electrodes, and 2) an in-line pair of spaced-apart electrodes. Temperature distributions over time were plotted using the electric field results and the bioheat equation. Since the thermal and electrical properties of the vertebral bodies of porcine, ovine, and human tissue were not available, measurements were undertaken to capture these data to input into the model. The measurements of electrical and thermal properties of cancellous and cortical vertebral body were made over a range of temperatures. The simulation temperature results agreed with live animal and human cadaver studies. In addition, the lesion shapes predicted in the simulations matched CT and MRI studies done during the chronic ovine study, as well as histology results. In conclusion, the simulations aided in shaping and sizing the RF electrodes, as well as positioning them in the vertebral body structures to assure that the basivertebral nerve was ablated, but

  6. Unsteady aerodynamic simulation of multiple bodies in relative motion: A prototype method

    NASA Technical Reports Server (NTRS)

    Meakin, Robert L.

    1989-01-01

    A prototype method for time-accurate simulation of multiple aerodynamic bodies in relative motion is presented. The method is general and features unsteady chimera domain decomposition techniques and an implicit approximately factored finite-difference procedure to solve the time-dependent thin-layer Navier-Stokes equations. The method is applied to a set of two- and three- dimensional test problems to establish spatial and temporal accuracy, quantify computational efficiency, and begin to test overall code robustness.

  7. Modeling, simulation and optimization approaches for design of lightweight car body structures

    NASA Astrophysics Data System (ADS)

    Kiani, Morteza

    Simulation-based design optimization and finite element method are used in this research to investigate weight reduction of car body structures made of metallic and composite materials under different design criteria. Besides crashworthiness in full frontal, offset frontal, and side impact scenarios, vibration frequencies, static stiffness, and joint rigidity are also considered. Energy absorption at the component level is used to study the effectiveness of carbon fiber reinforced polymer (CFRP) composite material with consideration of different failure criteria. A global-local design strategy is introduced and applied to multi-objective optimization of car body structures with CFRP components. Multiple example problems involving the analysis of full-vehicle crash and body-in-white models are used to examine the effect of material substitution and the choice of design criteria on weight reduction. The results of this study show that car body structures that are optimized for crashworthiness alone may not meet the vibration criterion. Moreover, optimized car body structures with CFRP components can be lighter with superior crashworthiness than the baseline and optimized metallic structures.

  8. N-Body Galaxy Dynamics Simulations on a Homogeneous Beowulf Cluster

    NASA Astrophysics Data System (ADS)

    Gipson, B.; McBride, W. R.; Kornreich, D. A.

    2004-12-01

    The galactic distribution of dark matter in disk galaxies remains an important problem in astrophysics. Modern methods in determining this distribution rely heavily on N--Body simulations. To this end we have developed a variable time step Piet Hut N--Body simulator, run using MPICH on a homogeneous 12 processor (x86) Beowulf cluster. The Hut Algorithm allows for the efficient, accurate calculation of forces between millions of points in a reasonable time. Additionally, subdividing the space into octants allows for the efficient creation O(N log (N)) of mutual nearest-neighbor data for all points. Such data are necessary for the inclusion of smoothed particle hydrodynamics (gas clouds, etc) as well as for merging the frequent, tightly bound, rapidly rotating, binary systems that decrease performance in this type of simulation. Initial tests have shown strong agreement with exhaustive O(N2) calculation results. Simulating 10,000 points yielded a total relative error of 0.32% with the exhaustive case, executing in 3.3 seconds on the cluster. General system-level tests have also been performed, including determining collapse times for cold and isothermal spherical distributions; all resulting in good agreement with analytical results. Tests on the Kuz'min galactic distribution have also resulted in expected rotational rates. We discuss the oscillatory behavior of such distributions within several constant potentials with the intention of further eliciting the distribution of dark matter within our own galaxy.

  9. General relativistic N-body simulations in the weak field limit

    NASA Astrophysics Data System (ADS)

    Adamek, Julian; Daverio, David; Durrer, Ruth; Kunz, Martin

    2013-11-01

    We develop a formalism for general relativistic N-body simulations in the weak field regime, suitable for cosmological applications. The problem is kept tractable by retaining the metric perturbations to first order, the first derivatives to second order, and second derivatives to all orders, thus taking into account the most important nonlinear effects of Einstein gravity. It is also expected that any significant “backreaction” should appear at this order. We show that the simulation scheme is feasible in practice by implementing it for a plane-symmetric situation and running two test cases, one with only cold dark matter, and one which also includes a cosmological constant. For these plane-symmetric situations, the deviations from the usual Newtonian N-body simulations remain small and, apart from a nontrivial correction to the background, can be accurately estimated within the Newtonian framework. The correction to the background scale factor, which is a genuine backreaction effect, can be robustly obtained with our algorithm. Our numerical approach is also naturally suited for the inclusion of extra relativistic fields and thus for dark energy or modified gravity simulations.

  10. Real-time simulation model of the HL-20 lifting body

    NASA Technical Reports Server (NTRS)

    Jackson, E. Bruce; Cruz, Christopher I.; Ragsdale, W. A.

    1992-01-01

    A proposed manned spacecraft design, designated the HL-20, has been under investigation at Langley Research Center. Included in that investigation are flight control design and flying qualities studies utilizing a man-in-the-loop real-time simulator. This report documents the current real-time simulation model of the HL-20 lifting body vehicle, known as version 2.0, presently in use at NASA Langley Research Center. Included are data on vehicle aerodynamics, inertias, geometries, guidance and control laws, and cockpit displays and controllers. In addition, trim case and dynamic check case data is provided. The intent of this document is to provide the reader with sufficient information to develop and validate an equivalent simulation of the HL-20 for use in real-time or analytical studies.

  11. Flight simulation of a wide-body transport aircraft to evaluate MLS-RNAV procedures

    NASA Technical Reports Server (NTRS)

    Branstetter, James R.; Houck, Jacob A.; Guenther, Arlene D.

    1988-01-01

    In a collaborative effort between the Federal Aviation Administration (FAA) NASA and the U.S. Air Force, a piloted simulation was conducted to look at the issues involved with flying a large, wide-body aircraft in the airport terminal area using Microwave Landing System Area Navigation (MLS)-RNAV procedures. A variety of approach paths, departure paths, and holding patterns were evaluated during the course of the study for operational use, flight technical errors, and safety. In addition, several methods for driving the horizontal situation indicator and flight director instruments were investigated along with needle sensitivity. The ultimate goal of the simulation was to develop and verify candidate paths and procedures prior to flight tests conducted in 1986/87. Subject pilots for the simulation study were provided by the FAA, NASA, the U.S. Air Force, and the airline industry.

  12. Protection against pertussis by Takeda's acellular pertussis vaccine: household contact studies in Kawasaki City, Japan.

    PubMed

    Kato, T; Kaku, H; Arimoto, Y

    1988-01-01

    To evaluate the vaccine efficacy of an acellular pertussis vaccine which has been in clinical use in Japan since 1981, a retrospective study was performed by a questionnaire survey of secondary pertussis attacks through family contact in 146 children with pertussis diagnosed in the period from January 1981 through May 1988. In this study, Takeda's acellular vaccine which contains a high level of FHA, low level of PT and a small amount of agglutinogen, was evaluated. Secondary pertussis attacks through family contact were found in 17 of 27 siblings (62.9%) not immunized with pertussis vaccine. On the other hand, 26 siblings immunized with Takeda's acellular vaccine were exposed to pertussis through family contact and a secondary attack was seen in only one of them (3.8%). The present study revealed an efficacy rate of 93.9% for Takeda's acellular pertussis vaccine. PMID:3078808

  13. Protection against pertussis by acellular pertussis vaccines (Takeda, Japan): household contact studies in Kawasaki City, Japan.

    PubMed

    Kato, T; Goshima, T; Nakajima, N; Kaku, H; Arimoto, Y; Hayashi, F

    1989-12-01

    To evaluate the vaccine efficacy of an acellular pertussis vaccine which has been in clinical use in Japan since 1981, a retrospective study was performed by a questionnaire survey of secondary pertussis attacks through family contact in 146 children with pertussis diagnosed in the period from January 1981 through May 1988. In this study, acellular vaccine made by Takeda Pharmaceutical Company, which contains a high level of FHA (filamentous hemagglutinin), a low level of PT (pertussis toxin) and a small amount of agglutinogen, was evaluated. Secondary pertussis attacks through family contact were found in 17 of 29 siblings (58.6%) not immunized with pertussis vaccine. On the other hand, 27 siblings immunized with Takeda's acellular vaccine were exposed to pertussis through family contact and a secondary attack was seen in only one of them (3.7%). The present study revealed an efficacy rate of 93.7% for Takeda's acellular pertussis vaccine. PMID:2516396

  14. [Protection against pertussis by Japanese T type acellular pertussis vaccine: household contact study in Kawasaki City].

    PubMed

    Kato, T; Matsuyoshi, S; Goshima, T; Nakajima, N; Yamamoto, H; Arimoto, Y; Kaku, H; Hayashi, F

    1989-09-01

    To evaluate the vaccine efficacy of acellular pertussis vaccine which has been in clinical use in Japan since 1981, a retrospective study was made by a questionnaire from secondary pertussis attack through family contact in 149 children with pertussis diagnosed in the period from January 1981 through May 1988. In this study, Takeda's acellular vaccine which contains a high level of FHA, low level of PT and a small amount of agglutinogen, was evaluated. Secondary pertussis attacks through family contact were found in 17 of 29 siblings (58.6%) not immunized with pertussis vaccine. On the other hand of the siblings immunized with Takeda's acellular vaccine 27 were exposed to pertussis through family contact and a secondary attack was seen in only one of them (3.4%). The present study revealed an efficacy rate of 94.2% for the Takeda's acellular pertussis vaccine. PMID:2509597

  15. Apatite-forming ability of vinylphosphonic acid-based copolymer in simulated body fluid: effects of phosphate group content.

    PubMed

    Hamai, Ryo; Shirosaki, Yuki; Miyazaki, Toshiki

    2016-10-01

    Phosphate groups on materials surfaces are known to contribute to apatite formation upon exposure of the materials in simulated body fluid and improved affinity of the materials for osteoblast-like cells. Typically, polymers containing phosphate groups are organic matrices consisting of apatite-polymer composites prepared by biomimetic process using simulated body fluid. Ca(2+) incorporation into the polymer accelerates apatite formation in simulated body fluid owing because of increase in the supersaturation degree, with respect to apatite in simulated body fluid, owing to Ca(2+) release from the polymer. However, the effects of phosphate content on the Ca(2+) release and apatite-forming abilities of copolymers in simulated body fluid are rather elusive. In this study, a phosphate-containing copolymer prepared from vinylphosphonic acid, 2-hydroxyethyl methacrylate, and triethylene glycol dimethacrylate was examined. The release of Ca(2+) in Tris-NaCl buffer and simulated body fluid increased as the additive amount of vinylphosphonic acid increased. However, apatite formation was suppressed as the phosphate groups content increased despite the enhanced release of Ca(2+) from the polymer. This phenomenon was reflected by changes in the surface zeta potential. Thus, it was concluded that the apatite-forming ability of vinylphosphonic acid-2-hydroxyethyl methacrylate-triethylene glycol dimethacrylate copolymer treated with CaCl2 solution was governed by surface state rather than Ca(2+) release in simulated body fluid. PMID:27585911

  16. Drift trajectories of a floating human body simulated in a hydraulic model of Puget Sound.

    PubMed

    Ebbesmeyer, C C; Haglund, W D

    1994-01-01

    After a young man jumped off a 221-foot (67 meters) high bridge, the drift of the body that beached 20 miles (32 km) away at Alki Point in Seattle, Washington was simulated with a hydraulic model. Simulations for the appropriate time period were performed using a small floating bead to represent the body in the hydraulic model at the University of Washington. Bead movements were videotaped and transferred to Computer Aided Drafting (AutoCAD) charts on a personal computer. Because of strong tidal currents in the narrow passage under the bridge (The Narrows near Tacoma, WA), small changes in the time of the jump (+/- 30 minutes) made large differences in the distance the body traveled (30 miles; 48 km). Hydraulic and other types of oceanographic models may be located by contacting technical experts known as physical oceanographers at local universities, and can be utilized to demonstrate trajectories of floating objects and the time required to arrive at selected locations. Potential applications for forensic death investigators include: to be able to set geographic and time limits for searches; determine potential origin of remains found floating or beached; and confirm and correlate information regarding entry into the water and sightings of remains. PMID:8113703

  17. Drift trajectories of a floating human body simulated in a hydraulic model of Puget Sound.

    PubMed

    Ebbesmeyer, C C; Haglund, W D

    1994-01-01

    After a young man jumped off a 221-foot (67 meters) high bridge, the drift of the body that beached 20 miles (32 km) away at Alki Point in Seattle, Washington was simulated with a hydraulic model. Simulations for the appropriate time period were performed using a small floating bead to represent the body in the hydraulic model at the University of Washington. Bead movements were videotaped and transferred to Computer Aided Drafting (AutoCAD) charts on a personal computer. Because of strong tidal currents in the narrow passage under the bridge (The Narrows near Tacoma, WA), small changes in the time of the jump (+/- 30 minutes) made large differences in the distance the body traveled (30 miles; 48 km). Hydraulic and other types of oceanographic models may be located by contacting technical experts known as physical oceanographers at local universities, and can be utilized to demonstrate trajectories of floating objects and the time required to arrive at selected locations. Potential applications for forensic death investigators include: to be able to set geographic and time limits for searches; determine potential origin of remains found floating or beached; and confirm and correlate information regarding entry into the water and sightings of remains.

  18. Fast Auroral Snapshot performance using a multi-body dynamic simulation

    NASA Technical Reports Server (NTRS)

    Zimbelman, Darrell; Walker, Mary

    1993-01-01

    This paper examines the complex dynamic interaction between two 2.6 m long stacer booms, four 30 m long flexible wire booms and the attitude control system of the Fast Auroral SnapshoT (FAST) spacecraft. The FAST vehicle will nominally operate as a negative orbit spinner, positioned in a 83 deg inclination, 350 x 4200 km orbit. For this study, a three-axis, non-linear, seven body dynamic simulation is developed using the TREETOPS software package. The significance of this approach is the ability to model each component of the FAST spacecraft as an individual member and connect them together in order to better understand the dynamic coupling between structures and the control system. Both the wire and stacer booms are modeled as separate bodies attached to a rigid central body. The wire booms are oriented perpendicular to the spin axis at right angles relative to each other, whereas the stacer booms are aligned with the spin axis. The analysis consists of a comparison between the simulated in-plane and out-of-plane boom motions with theoretically derived frequencies, and an examination of the dynamic coupling between the control system and boom oscillations. Results show that boom oscillations of up to 0.36 deg are acceptable in order to meet the performance requirements. The dynamic motion is well behaved when the precession coil is operating, however, activation of the spin coil produces an erratic trend in the spin rate which approaches the spin rate requirement.

  19. Three-Body Abrasion Testing Using Lunar Dust Simulants to Evaluate Surface System Materials

    NASA Technical Reports Server (NTRS)

    Kobrick, Ryan L.; Budinski, Kenneth G.; Street, Kenneth W., Jr.; Klaus, David M.

    2010-01-01

    Numerous unexpected operational issues relating to the abrasive nature of lunar dust, such as scratched visors and spacesuit pressure seal leaks, were encountered during the Apollo missions. To avoid reoccurrence of these unexpected detrimental equipment problems on future missions to the Moon, a series of two- and three-body abrasion tests were developed and conducted in order to begin rigorously characterizing the effect of lunar dust abrasiveness on candidate surface system materials. Two-body scratch tests were initially performed to examine fundamental interactions of a single particle on a flat surface. These simple and robust tests were used to establish standardized measurement techniques for quantifying controlled volumetric wear. Subsequent efforts described in the paper involved three-body abrasion testing designed to be more representative of actual lunar interactions. For these tests, a new tribotester was developed to expose samples to a variety of industrial abrasives and lunar simulants. The work discussed in this paper describes the three-body hardware setup consisting of a rotating rubber wheel that applies a load on a specimen as a loose abrasive is fed into the system. The test methodology is based on ASTM International (ASTM) B611, except it does not mix water with the abrasive. All tests were run under identical conditions. Abraded material specimens included poly(methyl methacrylate) (PMMA), hardened 1045 steel, 6061-T6 aluminum (Al) and 1018 steel. Abrasives included lunar mare simulant JSC- 1A-F (nominal size distribution), sieved JSC-1A-F (<25 m particle diameter), lunar highland simulant NU-LHT-2M, alumina (average diameter of 50 m used per ASTM G76), and silica (50/70 mesh used per ASTM G65). The measured mass loss from each specimen was converted using standard densities to determine total wear volume in cm3. Abrasion was dominated by the alumina and the simulants were only similar to the silica (i.e., sand) on the softer materials of

  20. Nonlinear biasing and redshift-space distortions in Lagrangian resummation theory and N-body simulations

    NASA Astrophysics Data System (ADS)

    Sato, Masanori; Matsubara, Takahiko

    2011-08-01

    Understanding a behavior of galaxy biasing is crucial for future galaxy redshift surveys. One aim is to measure the baryon acoustic oscillations (BAOs) within the precision of a few percent level. Using 30 large cosmological N-body simulations for a standard ΛCDM cosmology, we study the halo biasing over a wide redshift range. We compare the simulation results with theoretical predictions proposed by Matsubara [T. Matsubara, Phys. Rev. DPRVDAQ1550-7998 78, 083519 (2008).10.1103/PhysRevD.78.083519] which naturally incorporate the halo bias and redshift-space distortions into their formalism of perturbation theory with a resummation technique via the Lagrangian picture. The power spectrum and correlation function of halos obtained from Lagrangian resummation theory (LRT) well agree with N-body simulation results on scales of BAOs. Especially nonlinear effects on the baryon acoustic peak of the halo correlation function are accurately explained both in real and redshift space. We find that nonlinearity and scale dependence of bias are fairly well reproduced by 1-loop LRT up to k=0.35hMpc-1 (z=2 and 3) within a few percent level in real space and up to k=0.1hMpc-1 (z=2) and 0.15hMpc-1 (z=3) in redshift space. Thus, the LRT is very powerful for accurately extracting cosmological information in upcoming high redshift BAO surveys.

  1. The use of the articulated total body model as a robot dynamics simulation tool

    NASA Technical Reports Server (NTRS)

    Obergfell, Louise A.; Avula, Xavier J. R.; Kalegs, Ints

    1988-01-01

    The Articulated Total Body (ATB) model is a computer sumulation program which was originally developed for the study of aircrew member dynamics during ejection from high-speed aircraft. This model is totally three-dimensional and is based on the rigid body dynamics of coupled systems which use Euler's equations of motion with constraint relations of the type employed in the Lagrange method. In this paper the use of the ATB model as a robot dynamics simulation tool is discussed and various simulations are demonstrated. For this purpose the ATB model has been modified to allow for the application of torques at the joints as functions of state variables of the system. Specifically, the motion of a robotic arm with six revolute articulations with joint torques prescribed as functions of angular displacement and angular velocity are demonstrated. The simulation procedures developed in this work may serve as valuable tools for analyzing robotic mechanisms, dynamic effects, joint load transmissions, feed-back control algorithms employed in the actuator control and end-effector trajectories.

  2. Hierarchical tree algorithm for collisional N-body simulations on GRAPE

    NASA Astrophysics Data System (ADS)

    Fukushige, Toshiyuki; Kawai, Atsushi

    2016-06-01

    We present an implementation of the hierarchical tree algorithm on the individual timestep algorithm (the Hermite scheme) for collisional N-body simulations, running on the GRAPE-9 system, a special-purpose hardware accelerator for gravitational many-body simulations. Such a combination of the tree algorithm and the individual timestep algorithm was not easy on the previous GRAPE system mainly because its memory addressing scheme was limited only to sequential access to a full set of particle data. The present GRAPE-9 system has an indirect memory addressing unit and a particle memory large enough to store all the particle data and also the tree node data. The indirect memory addressing unit stores interaction lists for the tree algorithm, which is constructed on the host computer, and, according to the interaction lists, force pipelines calculate only the interactions necessary. In our implementation, the interaction calculations are significantly reduced compared to direct N2 summation in the original Hermite scheme. For example, we can achieve about a factor 30 of speedup (equivalent to about 17 teraflops) against the Hermite scheme for a simulation of an N = 106 system, using hardware of a peak speed of 0.6 teraflops for the Hermite scheme.

  3. In Vitro Studies Evaluating Leaching of Mercury from Mine Waste Calcine Using Simulated Human Body Fluids

    PubMed Central

    2010-01-01

    In vitro bioaccessibility (IVBA) studies were carried out on samples of mercury (Hg) mine-waste calcine (roasted Hg ore) by leaching with simulated human body fluids. The objective was to estimate potential human exposure to Hg due to inhalation of airborne calcine particulates and hand-to-mouth ingestion of Hg-bearing calcines. Mine waste calcines collected from Hg mines at Almadén, Spain, and Terlingua, Texas, contain Hg sulfide, elemental Hg, and soluble Hg compounds, which constitute primary ore or compounds formed during Hg retorting. Elevated leachate Hg concentrations were found during calcine leaching using a simulated gastric fluid (as much as 6200 μg of Hg leached/g sample). Elevated Hg concentrations were also found in calcine leachates using a simulated lung fluid (as much as 9200 μg of Hg leached/g), serum-based fluid (as much as 1600 μg of Hg leached/g), and water of pH 5 (as much as 880 μg of Hg leached/g). The leaching capacity of Hg is controlled by calcine mineralogy; thus, calcines containing soluble Hg compounds contain higher leachate Hg concentrations. Results indicate that ingestion or inhalation of Hg mine-waste calcine may lead to increased Hg concentrations in the human body, especially through the ingestion pathway. PMID:20491469

  4. In vitro studies evaluating leaching of mercury from mine waste calcine using simulated human body fluids.

    PubMed

    Gray, John E; Plumlee, Geoffrey S; Morman, Suzette A; Higueras, Pablo L; Crock, James G; Lowers, Heather A; Witten, Mark L

    2010-06-15

    In vitro bioaccessibility (IVBA) studies were carried out on samples of mercury (Hg) mine-waste calcine (roasted Hg ore) by leaching with simulated human body fluids. The objective was to estimate potential human exposure to Hg due to inhalation of airborne calcine particulates and hand-to-mouth ingestion of Hg-bearing calcines. Mine waste calcines collected from Hg mines at Almaden, Spain, and Terlingua, Texas, contain Hg sulfide, elemental Hg, and soluble Hg compounds, which constitute primary ore or compounds formed during Hg retorting. Elevated leachate Hg concentrations were found during calcine leaching using a simulated gastric fluid (as much as 6200 microg of Hg leached/g sample). Elevated Hg concentrations were also found in calcine leachates using a simulated lung fluid (as much as 9200 microg of Hg leached/g), serum-based fluid (as much as 1600 microg of Hg leached/g), and water of pH 5 (as much as 880 microg of Hg leached/g). The leaching capacity of Hg is controlled by calcine mineralogy; thus, calcines containing soluble Hg compounds contain higher leachate Hg concentrations. Results indicate that ingestion or inhalation of Hg mine-waste calcine may lead to increased Hg concentrations in the human body, especially through the ingestion pathway.

  5. Nonlinear stochastic biasing of halos: Analysis of cosmological N-body simulations and perturbation theories

    NASA Astrophysics Data System (ADS)

    Sato, Masanori; Matsubara, Takahiko

    2013-06-01

    It is crucial to understand and model a behavior of galaxy biasing for future ambitious galaxy redshift surveys. Using 40 large cosmological N-body simulations for a standard ΛCDM cosmology, we study the cross-correlation coefficient between matter and the halo density field, which is an indicator of the stochasticity of bias, over a wide redshift range 0≤z≤3. The cross-correlation coefficient is important to extract information on the matter density field, e.g., by combining galaxy clustering and galaxy-galaxy lensing measurements. We compare the simulation results with integrated perturbation theory (iPT) proposed by one of the present authors and standard perturbation theory combined with a phenomenological model of local bias. The cross-correlation coefficient derived from the iPT agrees with N-body simulation results down to r˜15(10)h-1Mpc within 0.5 (1.0)% for all redshifts and halo masses we consider. The standard perturbation theory with local bias does not explain complicated behaviors on quasilinear scales at low redshifts, while roughly reproduces the general behavior of the cross-correlation coefficient on fully nonlinear scales. The iPT is powerful to predict the cross-correlation coefficient down to quasilinear regimes with a high precision.

  6. Rahman Prize Talk: Pushing the frontier in the simulation of correlated quantum many body systems

    NASA Astrophysics Data System (ADS)

    Troyer, Matthias

    Amazing progress in the simulation of correlated quantum many body systems has been achieved in the past two decades by combining significant advances in new algorithms with efficient implementations on ever faster supercomputers. This has enabled the accurate simulation of an increasing number of problems and helped settle many open questions. I will review a selection of results that my collaborators and I have worked on, from quantum phase transitions in quantum magnets, over supersolidity of bosons in lattice models and Helium-4 to recent simulations of correlated fermions and quantum gases. I will then provide an outlook to the future and discuss how in the short term analog quantum simulators can help tackle problems for which no efficient simulation algorithms exist and how in the longer term quantum computers can be used to solve many of the still open questions in the field. I will finally connect to the topic of the remainder of this symposium by touching on how the design of new topological materials will help in the construction of these quantum computers.

  7. N-body simulations of collective effects in spiral and barred galaxies

    NASA Astrophysics Data System (ADS)

    Zhang, X.

    2016-10-01

    We present gravitational N-body simulations of the secular morphological evolution of disk galaxies induced by density wave modes. In particular, we address the demands collective effects place on the choice of simulation parameters, and show that the common practice of the use of a large gravity softening parameter was responsible for the failure of past simulations to correctly model the secular evolution process in galaxies, even for those simulations where the choice of basic state allows an unstable mode to emerge, a prerequisite for obtaining the coordinated radial mass flow pattern needed for secular evolution of galaxies along the Hubble sequence. We also demonstrate that the secular evolution rates measured in our improved simulations agree to an impressive degree with the corresponding rates predicted by the recently-advanced theories of dynamically-driven secular evolution of galaxies. The results of the current work, besides having direct implications on the cosmological evolution of galaxies, also shed light on the general question of how irreversibility emerges from a nominally reversible physical system.

  8. Simulation, Modeling and Feedback Control of the flow around a Square-Back Bluff Body

    NASA Astrophysics Data System (ADS)

    Dalla Longa, Laurent; Morgans, Aimee; Imperial College London-Flow Control Team

    2015-11-01

    Because of capacity, aesthetic and comfort requirements, most road vehicles are not streamlined but blunt bluff bodies. The flow exhibits a large wake recirculation area leading to high pressure drag, which at highway speeds, represents the main source of energy loss. In this work, Large Eddy Simulations of the flow past a square-back bluff body with interacting shear layers are performed with the aim of reducing aerodynamic drag. A linear feedback control strategy is applied to increase the back face pressure and therefore obtain drag reduction. Synthetic jets located along the perimeter of the back face are used for actuation while body mounted sensors record the base pressure. System identification, via harmonic actuator forcing, is used to characterize the flow response to actuation, which is assumed to be dynamically linear. Based on the identified frequency response, a feedback controller is designed in the frequency domain which aims to either attenuate or amplify base pressure fluctuations by shaping of the sensitivity transfer function. This is first done for a D-shaped body. Current work extends this strategy to a simplified lorry geometry on which experiments were carried out recently.

  9. Effects of obesity on occupant responses in frontal crashes: a simulation analysis using human body models.

    PubMed

    Shi, Xiangnan; Cao, Libo; Reed, Matthew P; Rupp, Jonathan D; Hu, Jingwen

    2015-01-01

    The objective of this study is to investigate the effects of obesity on occupant responses in frontal crashes using whole-body human finite element (FE) models representing occupants with different obesity levels. In this study, the geometry of THUMS 4 midsize male model was varied using mesh morphing techniques with target geometries defined by statistical models of external body contour and exterior ribcage geometry. Models with different body mass indices (BMIs) were calibrated against cadaver test data under high-speed abdomen loading and frontal crash conditions. A parametric analysis was performed to investigate the effects of BMI on occupant injuries in frontal crashes based on the Taguchi method while controlling for several vehicle design parameters. Simulations of obese occupants predicted significantly higher risks of injuries to the thorax and lower extremities in frontal crashes compared with non-obese occupants, which is consistent with previous field data analyses. These higher injury risks are mainly due to the increased body mass and relatively poor belt fit caused by soft tissues for obese occupants. This study demonstrated the feasibility of using a parametric human FE model to investigate the obesity effects on occupant responses in frontal crashes.

  10. Effects of obesity on occupant responses in frontal crashes: a simulation analysis using human body models.

    PubMed

    Shi, Xiangnan; Cao, Libo; Reed, Matthew P; Rupp, Jonathan D; Hu, Jingwen

    2015-01-01

    The objective of this study is to investigate the effects of obesity on occupant responses in frontal crashes using whole-body human finite element (FE) models representing occupants with different obesity levels. In this study, the geometry of THUMS 4 midsize male model was varied using mesh morphing techniques with target geometries defined by statistical models of external body contour and exterior ribcage geometry. Models with different body mass indices (BMIs) were calibrated against cadaver test data under high-speed abdomen loading and frontal crash conditions. A parametric analysis was performed to investigate the effects of BMI on occupant injuries in frontal crashes based on the Taguchi method while controlling for several vehicle design parameters. Simulations of obese occupants predicted significantly higher risks of injuries to the thorax and lower extremities in frontal crashes compared with non-obese occupants, which is consistent with previous field data analyses. These higher injury risks are mainly due to the increased body mass and relatively poor belt fit caused by soft tissues for obese occupants. This study demonstrated the feasibility of using a parametric human FE model to investigate the obesity effects on occupant responses in frontal crashes. PMID:24666169

  11. Characterization of a lower-body exoskeleton for simulation of space-suited locomotion

    NASA Astrophysics Data System (ADS)

    Carr, Christopher E.; Newman, Dava J.

    2008-02-01

    In a previous analysis of suited and unsuited locomotion energetics, we found evidence that space suits act as springs during running. Video images from the lunar surface suggest that knee torques create, in large part, this spring effect. We hypothesized that a lower-body exoskeleton, properly constructed, could be used to simulate the knee torques of a range of space suits. Here we report characterization of a lower-body exoskeleton. Equivalent spring stiffness of each exoskeleton leg varies as a function of exoskeleton knee angle and load, and the exoskeleton joint-torque relationship closely matches the current NASA space suit, or Extravehicular Mobility Unit, knee torques in form and magnitude. We have built an exoskeleton with two physical non-linear springs, which achieve space-suit like joint-torques. Therefore space-suit legs act as springs, with this effect most pronounced when locomotion requires large changes in knee flexion such as during running.

  12. Gain in computational efficiency by vectorization in the dynamic simulation of multi-body systems

    NASA Technical Reports Server (NTRS)

    Amirouche, F. M. L.; Shareef, N. H.

    1991-01-01

    An improved technique for the identification and extraction of the exact quantities associated with the degrees of freedom at the element as well as the flexible body level is presented. It is implemented in the dynamic equations of motions based on the recursive formulation of Kane et al. (1987) and presented in a matrix form, integrating the concepts of strain energy, the finite-element approach, modal analysis, and reduction of equations. This technique eliminates the CPU intensive matrix multiplication operations in the code's hot spots for the dynamic simulation of the interconnected rigid and flexible bodies. A study of a simple robot with flexible links is presented by comparing the execution times on a scalar machine and a vector-processor with and without vector options. Performance figures demonstrating the substantial gains achieved by the technique are plotted.

  13. Molecular dynamics simulation of interparticle spacing and many-body effect in gold supracrystals.

    PubMed

    Liu, X P; Ni, Y; He, L H

    2016-04-01

    Interparticle spacing in supracrystals is a crucial parameter for photoelectric applications as it dominates the transport rates between neighboring nanoparticles (NPs). Based on large-scale molecular dynamics simulations, we calculate interparticle spacing in alkylthiol-stabilized gold supracrystals as a function of the NP size, ligand length and external pressure. The repulsive many-body interactions in the supracrystals are also quantified by comparing the interparticle spacing with that between two individual NPs at equilibrium. Our results are consistent with available experiments, and are expected to help precise control of interparticle spacing in supracrystal devices.

  14. Molecular dynamics simulation of interparticle spacing and many-body effect in gold supracrystals.

    PubMed

    Liu, X P; Ni, Y; He, L H

    2016-04-01

    Interparticle spacing in supracrystals is a crucial parameter for photoelectric applications as it dominates the transport rates between neighboring nanoparticles (NPs). Based on large-scale molecular dynamics simulations, we calculate interparticle spacing in alkylthiol-stabilized gold supracrystals as a function of the NP size, ligand length and external pressure. The repulsive many-body interactions in the supracrystals are also quantified by comparing the interparticle spacing with that between two individual NPs at equilibrium. Our results are consistent with available experiments, and are expected to help precise control of interparticle spacing in supracrystal devices. PMID:26909856

  15. Computer-Simulation Surrogates for Optimization: Application to Trapezoidal Ducts and Axisymmetric Bodies

    NASA Technical Reports Server (NTRS)

    Otto, John C.; Paraschivoiu, Marius; Yesilyurt, Serhat; Patera, Anthony T.

    1995-01-01

    Engineering design and optimization efforts using computational systems rapidly become resource intensive. The goal of the surrogate-based approach is to perform a complete optimization with limited resources. In this paper we present a Bayesian-validated approach that informs the designer as to how well the surrogate performs; in particular, our surrogate framework provides precise (albeit probabilistic) bounds on the errors incurred in the surrogate-for-simulation substitution. The theory and algorithms of our computer{simulation surrogate framework are first described. The utility of the framework is then demonstrated through two illustrative examples: maximization of the flowrate of fully developed ow in trapezoidal ducts; and design of an axisymmetric body that achieves a target Stokes drag.

  16. Effects of 17β-estradiol on emissions of greenhouse gases in simulative natural water body.

    PubMed

    Ruan, Aidong; Zhao, Ying; Liu, Chenxiao; Zong, Fengjiao; Yu, Zhongbo

    2015-05-01

    Environmental estrogens are widely spread across the world and are increasingly thought of as serious contaminators. The present study looks at the influence of different concentrations of 17β-estradiol on greenhouse gas emissions (CO2 , CH4 , and N2 O) in simulated systems to explore the relationship between environmental estrogen-pollution and greenhouse gas emissions in natural water bodies. The present study finds that 17β-estradiol pollution in simulated systems has significant promoting effects on the emissions of CH4 and CO2 , although no significant effects on N2 O emissions. The present study indicates that 17β-estradiol has different effects on the different elements cycles; the mechanism of microbial ecology is under review.

  17. Simulation of exchanges of multiple gases in bubbles in the body.

    PubMed

    Burkard, M E; Van Liew, H D

    1994-02-01

    This communication introduces a system of equations, for numerical solution, which simulates the generation, growth, and decay of bubbles. The system is an advance over previous works because it allows for simultaneous diffusion of any number of gases. Our purpose for developing the system is to gain insight into the bubbles that occur in the body in decompression sickness (DCS). We validate the calculation system by matching observed data of DCS bubbles and of large subcutaneous gas pockets in rats. We demonstrate how a temporary supersaturation and bubble formation can occur without change of ambient pressure when there is a change in the inert gas being breathed. With exposures to hypobaric environments, such as when astronauts work in space, simulations show that O2, CO2, and water vapor add appreciably to volume of bubbles and affect the diffusion of inert gas.

  18. The effect of variability in body segment parameters on joint moment using Monte Carlo simulations.

    PubMed

    Nguyen, Tam C; Reynolds, Karen J

    2014-01-01

    This study used Monte Carlo methods to simulate the effects of variability and uncertainty in inertial body segment parameters (BSPs) on joint torques calculated using inverse dynamics. The average and standard deviation values of BSPs from previously published studies were used as inputs into the Monte Carlo simulation. Data from five groups were evaluated: cadaveric subjects; living subjects (Caucasian only); female living subjects (Caucasian only); male living subjects (Caucasian only); and living subjects (non-Caucasian). The differences in BSPs observed between the different groups were statistically significant; however, using BSP variability data from these groups made little difference to the calculated joint torques. This suggests that for slow and repeatable movement such as walking, BSPs have little effect on joint moments, except for the swing phase. Even then, the magnitude of difference in the swing phase due to variability in BSPs is not much greater than the inter-trial variability. As expected, distal BSPs have little effect on proximal joint moment.

  19. Investigation on pitch system loads by means of an integral multi body simulation approach

    NASA Astrophysics Data System (ADS)

    Berroth, J.; Jacobs, G.; Kroll, T.; Schelenz, R.

    2016-09-01

    In modern horizontal axis wind turbines the rotor blades are adjusted by three individual pitch systems to control power output. The pitch system consists of either a hydraulic or an electrical actuator, the blade bearing, the rotor blade itself and the control. In case of an electrical drive a gearbox is used to transmit the high torques that are required for blade pitch angle adjustment. In this contribution a new integral multi body simulation approach is presented that enables detailed assessment of dynamic pitch system loads. The simulation results presented are compared and evaluated with measurement data of a 2 MW-class reference wind turbine. Major focus of this contribution is on the assessment of non linear tooth contact behaviour incorporating tooth backlash for the single gear stages and the impact on dynamic pitch system loads.

  20. Recent advances in numerical simulation and control of asymmetric flows around slender bodies

    NASA Technical Reports Server (NTRS)

    Kandil, Osama A.; Wong, Tin-Chee; Sharaf, Hazem H.; Liu, C. H.

    1992-01-01

    The problems of asymmetric flow around slender bodies and its control are formulated using the unsteady, compressible, thin-layer or full Navier-Stokes equations which are solved using an implicit, flux-difference splitting, finite-volume scheme. The problem is numerically simulated for both locally-conical and three-dimensional flows. The numerical applications include studies of the effects of relative incidence, Mach number and Reynolds number on the flow asymmetry. For the control of flow asymmetry, the numerical simulation cover passive and active control methods. For the passive control, the effectiveness of vertical fins placed in the leeward plane of geometric symmetry and side strakes with different orientations is studied. For the active control, the effectiveness of normal and tangential flow injection and surface heating and a combination of these methods is studied.

  1. Higher moments of primordial non-Gaussianity and N-body simulations

    SciTech Connect

    Adhikari, Saroj; Shandera, Sarah; Dalal, Neal E-mail: shandera@gravity.psu.edu

    2014-06-01

    We perform cosmological N-body simulations with non-Gaussian initial conditions generated from two independent fields. The dominant contribution to the perturbations comes from a purely Gaussian field, but we allow the second field to have local non-Gaussianity that need not be weak. This scenario allows us to adjust the relative importance of non-Gaussian contributions beyond the skewness, producing a scaling of the higher moments different from (and stronger than) the scaling in the usual single field local ansatz. We compare semi-analytic prescriptions for the non-Gaussian mass function, large scale halo bias, and stochastic bias against the simulation results. We discuss applications of this work to large scale structure measurements that can test a wider range of models for the primordial fluctuations than is usually explored.

  2. Evaluation of upper body muscle activity during cardiopulmonary resuscitation performance in simulated microgravity

    NASA Astrophysics Data System (ADS)

    Waye, A. B.; Krygiel, R. G.; Susin, T. B.; Baptista, R.; Rehnberg, L.; Heidner, G. S.; de Campos, F.; Falcão, F. P.; Russomano, T.

    2013-09-01

    Performance of efficient single-person cardiopulmonary resuscitation (CPR) is vital to maintain cardiac and cerebral perfusion during the 2-4 min it takes for deployment of advanced life support during a space mission. The aim of the present study was to investigate potential differences in upper body muscle activity during CPR performance at terrestrial gravity (+1Gz) and in simulated microgravity (μG). Muscle activity of the triceps brachii, erector spinae, rectus abdominis and pectoralis major was measured via superficial electromyography in 20 healthy male volunteers. Four sets of 30 external chest compressions (ECCs) were performed on a mannequin. Microgravity was simulated using a body suspension device and harness; the Evetts-Russomano (ER) method was adopted for CPR performance in simulated microgravity. Heart rate and perceived exertion via Borg scores were also measured. While a significantly lower depth of ECCs was observed in simulated microgravity, compared with +1Gz, it was still within the target range of 40-50 mm. There was a 7.7% decrease of the mean (±SEM) ECC depth from 48 ± 0.3 mm at +1Gz, to 44.3 ± 0.5 mm during microgravity simulation (p < 0.001). No significant difference in number or rate of compressions was found between the two conditions. Heart rate displayed a significantly larger increase during CPR in simulated microgravity than at +1Gz, the former presenting a mean (±SEM) of 23.6 ± 2.91 bpm and the latter, 76.6 ± 3.8 bpm (p < 0.001). Borg scores were 70% higher post-microgravity compressions (17 ± 1) than post +1Gz compressions (10 ± 1) (p < 0.001). Intermuscular comparisons showed the triceps brachii to have significantly lower muscle activity than each of the other three tested muscles, in both +1Gz and microgravity. As shown by greater Borg scores and heart rate increases, CPR performance in simulated microgravity is more fatiguing than at +1Gz. Nevertheless, no significant difference in muscle activity between conditions

  3. Building merger trees from cosmological N-body simulations. Towards improving galaxy formation models using subhaloes

    NASA Astrophysics Data System (ADS)

    Tweed, D.; Devriendt, J.; Blaizot, J.; Colombi, S.; Slyz, A.

    2009-11-01

    Context: In the past decade or so, using numerical N-body simulations to describe the gravitational clustering of dark matter (DM) in an expanding universe has become the tool of choice for tackling the issue of hierarchical galaxy formation. As mass resolution increases with the power of supercomputers, one is able to grasp finer and finer details of this process, resolving more and more of the inner structure of collapsed objects. This begs one to revisit time and again the post-processing tools with which one transforms particles into “invisible” dark matter haloes and from thereon into luminous galaxies. Aims: Although a fair amount of work has been devoted to growing Monte-Carlo merger trees that resemble those built from an N-body simulation, comparatively little effort has been invested in quantifying the caveats one necessarily encounters when one extracts trees directly from such a simulation. To somewhat revert the tide, this paper seeks to provide its reader with a comprehensive study of the problems one faces when following this route. Methods: The first step in building merger histories of dark matter haloes and their subhaloes is to identify these structures in each of the time outputs (snapshots) produced by the simulation. Even though we discuss a particular implementation of such an algorithm (called AdaptaHOP) in this paper, we believe that our results do not depend on the exact details of the implementation but instead extend to most if not all (sub)structure finders. To illustrate this point in the appendix we compare AdaptaHOP's results to the standard friend-of-friend (FOF) algorithm, widely utilised in the astrophysical community. We then highlight different ways of building merger histories from AdaptaHOP haloes and subhaloes, contrasting their various advantages and drawbacks. Results: We find that the best approach to (sub)halo merging histories is through an analysis that goes back and forth between identification and tree building

  4. Maps of CMB lensing deflection from N-body simulations in Coupled Dark Energy Cosmologies

    SciTech Connect

    Carbone, Carmelita; Baldi, Marco; Baccigalupi, Carlo E-mail: marco.baldi5@unibo.it E-mail: bacci@sissa.it

    2013-09-01

    We produce lensing potential and deflection-angle maps in order to simulate the weak gravitational lensing of the Cosmic Microwave Background (CMB) via ray-tracing through the COupled Dark Energy Cosmological Simulations (CoDECS), the largest suite of N-body simulations to date for interacting Dark Energy cosmologies. The constructed maps faithfully reflect the N-body cosmic structures on a range of scales going from the arcminute to the degree scale, limited only by the resolution and extension of the simulations. We investigate the variation of the lensing pattern due to the underlying Dark Energy (DE) dynamics, characterised by different background and perturbation behaviours as a consequence of the interaction between the DE field and Cold Dark Matter (CDM). In particular, we study in detail the results from three cosmological models differing in the background and perturbations evolution at the epoch in which the lensing cross section is most effective, corresponding to a redshift of ∼ 1, with the purpose to isolate their imprints in the lensing observables, regardless of the compatibility of these models with present constraints. The scenarios investigated here include a reference ΛCDM cosmology, a standard coupled DE (cDE) scenario, and a ''bouncing'' cDE scenario. For the standard cDE scenario, we find that typical differences in the lensing potential result from two effects: the enhanced growth of linear CDM density fluctuations with respect to the ΛCDM case, and the modified nonlinear dynamics of collapsed structures induced by the DE-CDM interaction. As a consequence, CMB lensing highlights the DE impact in the cosmological expansion, even in the degenerate case where the amplitude of the linear matter density perturbations, parametrised through σ{sub 8}, is the same in both the standard cDE and ΛCDM cosmologies. For the ''bouncing'' scenario, we find that the two opposite behaviours of the lens density contrast and of the matter abundance lead to

  5. Speeding up N-body simulations of modified gravity: Vainshtein screening models

    SciTech Connect

    Barreira, Alexandre; Bose, Sownak; Li, Baojiu E-mail: sownak.bose@durham.ac.uk

    2015-12-01

    We introduce and demonstrate the power of a method to speed up current iterative techniques for N-body modified gravity simulations. Our method is based on the observation that the accuracy of the final result is not compromised if the calculation of the fifth force becomes less accurate, but substantially faster, in high-density regions where it is relatively weak due to screening. We focus on the nDGP model which employs Vainshtein screening, and test our method by running AMR simulations in which the fifth force on the finer levels of the mesh (high density) is not obtained iteratively, but instead interpolated from coarser levels. The calculation of the standard gravity component of the force still employs the full AMR structure. We show that the impact this has on the matter power spectrum is below 1% for k < 5h/Mpc at 0z = , and even smaller at higher redshift. The impact on halo properties is also small (∼< 3% for abundance, profiles, mass; and ∼< 0.05% for positions and velocities). The method can boost the performance of modified gravity simulations by more than a factor of 10. This allows them to run on timescales similar to GR simulations and to push them to resolution levels that were previously hard to achieve.

  6. N-body simulations with generic non-Gaussian initial conditions II: halo bias

    NASA Astrophysics Data System (ADS)

    Wagner, Christian; Verde, Licia

    2012-03-01

    We present N-body simulations for generic non-Gaussian initial conditions with the aim of exploring and modelling the scale-dependent halo bias. This effect is evident on very large scales requiring large simulation boxes. In addition, the previously available prescription to implement generic non-Gaussian initial conditions has been improved to keep under control higher-order terms which were spoiling the power spectrum on large scales. We pay particular attention to the differences between physical, inflation-motivated primordial bispectra and their factorizable templates, and to the operational definition of the non-Gaussian halo bias (which has both a scale-dependent and an approximately scale-independent contributions). We find that analytic predictions for both the non-Gaussian halo mass function and halo bias work well once a fudge factor (which was introduced before but still lacks convincing physical explanation) is calibrated on simulations. The halo bias remains therefore an extremely promising tool to probe primordial non-Gaussianity and thus to give insights into the physical mechanism that generated the primordial perturbations. The simulation outputs and tables of the analytic predictions will be made publicly available via the non-Gaussian comparison project web site http://icc.ub.edu/~liciaverde/NGSCP.html.

  7. Algorithm for simulation of quantum many-body dynamics using dynamical coarse-graining

    SciTech Connect

    Khasin, M.; Kosloff, R.

    2010-04-15

    An algorithm for simulation of quantum many-body dynamics having su(2) spectrum-generating algebra is developed. The algorithm is based on the idea of dynamical coarse-graining. The original unitary dynamics of the target observables--the elements of the spectrum-generating algebra--is simulated by a surrogate open-system dynamics, which can be interpreted as weak measurement of the target observables, performed on the evolving system. The open-system state can be represented by a mixture of pure states, localized in the phase space. The localization reduces the scaling of the computational resources with the Hilbert-space dimension n by factor n{sup 3/2}(ln n){sup -1} compared to conventional sparse-matrix methods. The guidelines for the choice of parameters for the simulation are presented and the scaling of the computational resources with the Hilbert-space dimension of the system is estimated. The algorithm is applied to the simulation of the dynamics of systems of 2x10{sup 4} and 2x10{sup 6} cold atoms in a double-well trap, described by the two-site Bose-Hubbard model.

  8. Characterization of the cosmological nonlinear path of single galaxies in N-body Simulations

    NASA Astrophysics Data System (ADS)

    Stalder Díaz, Diego Herbin; Rosa, Reinaldo; Clua, Esteban; Campanharo, Andriana

    Turbulent-like behaviour is an important and recent ingredient in the investigation of large scale structure formation in the observable universe [1,2]. Recently, an established statistical method was used to demonstrate the importance of considering chaotic advection (or Lagrange turbulence) in combination with gravitational instabilities in the LambdaCDM simulations performed from the Virgo Consortium (VC). However, the Hubble volumes simulated from GADGET-VC algoritm have some limitations for direct lagrangian data analysis due to the large amount of data and no real time computation for particle kinetic velocity along the dark matter structure evolution. We use our COsmic LAgrangian TUrbulence Simulator (COLATUS) [3], based on GPU/CUDA technology, to perform gravitational Cosmological N-body simulations and tracking the particles paths. In this work we discuss the chaotic advection behavior of tracers galaxies based on the angular velocity fluctuation analysis of single particles during its trajectory to the gravitational collapse of super clusters at low redshifts. [1] Caretta et al., A&A doi:10.1051/0004-6361:20079105 [2] Rosa et al., CCP doi: 10.1016/j.cpc.2008.11.018 [3] Stalder et al., AIP doi: 10.1063/1.4756992

  9. Robust human body model injury prediction in simulated side impact crashes.

    PubMed

    Golman, Adam J; Danelson, Kerry A; Stitzel, Joel D

    2016-01-01

    This study developed a parametric methodology to robustly predict occupant injuries sustained in real-world crashes using a finite element (FE) human body model (HBM). One hundred and twenty near-side impact motor vehicle crashes were simulated over a range of parameters using a Toyota RAV4 (bullet vehicle), Ford Taurus (struck vehicle) FE models and a validated human body model (HBM) Total HUman Model for Safety (THUMS). Three bullet vehicle crash parameters (speed, location and angle) and two occupant parameters (seat position and age) were varied using a Latin hypercube design of Experiments. Four injury metrics (head injury criterion, half deflection, thoracic trauma index and pelvic force) were used to calculate injury risk. Rib fracture prediction and lung strain metrics were also analysed. As hypothesized, bullet speed had the greatest effect on each injury measure. Injury risk was reduced when bullet location was further from the B-pillar or when the bullet angle was more oblique. Age had strong correlation to rib fractures frequency and lung strain severity. The injuries from a real-world crash were predicted using two different methods by (1) subsampling the injury predictors from the 12 best crush profile matching simulations and (2) using regression models. Both injury prediction methods successfully predicted the case occupant's low risk for pelvic injury, high risk for thoracic injury, rib fractures and high lung strains with tight confidence intervals. This parametric methodology was successfully used to explore crash parameter interactions and to robustly predict real-world injuries.

  10. Biomineralization of hydroxyapatite in silver ion-exchanged nanocrystalline ZSM-5 zeolite using simulated body fluid.

    PubMed

    Kaur, Balwinder; Srivastava, Rajendra; Satpati, Biswarup; Kondepudi, Kanthi Kiran; Bishnoi, Mahendra

    2015-11-01

    Silver ion-exchanged nanocrystalline zeolite (Ag-Nano-ZSM-5) and silver ion-exchanged conventional zeolite (Ag-ZSM-5) were synthesized. Zeolites were incubated in simulated body fluid at 310K for different time periods to grow hydroxyapatite in their matrixes. Significant large amount of hydroxyapatite was grown in Ag-Nano-ZSM-5 matrix after incubation in simulated body fluid when compared to Ag-ZSM-5. The resultant material was characterized using X-ray diffraction, N2-adsorption, scanning/transmission electron microscopy, energy dispersive X-ray, and inductively coupled plasma analysis. Mechanical properties such as compressive modulus, compressive strength, and strain at failure of the parent materials were evaluated. Biocompatibility assays suggested that Ag-Nano-ZSM-5 and hydroxyapatite grown in Ag-Nano-ZSM-5 were compatible and did not impose any toxicity to RAW 264.7 cells macrophase and Caco2 cells suggesting considerable potential for biomedical applications such as bone implants.

  11. The behaviour of selected yttrium containing bioactive glass microspheres in simulated body environments.

    PubMed

    Cacaina, D; Ylänen, H; Simon, S; Hupa, M

    2008-03-01

    The study aims at the manufacture and investigation of biodegradable glass microspheres incorporated with yttrium potentially useful for radionuclide therapy of cancer. The glass microspheres in the SiO2-Na2O-P2O5-CaO-K2O-MgO system containing yttrium were prepared by conventional melting and flame spheroidization. The behaviour of the yttrium silicate glass microspheres was investigated under in vitro conditions using simulated body fluid (SBF) and Tris buffer solution (TBS), for different periods of time, according to half-life time of the Y-90. The local structure of the glasses and the effect of yttrium on the biodegradability process were evaluated by Fourier Transform Infrared (FT-IR) spectroscopy and Back Scattered Electron Imaging of Scanning Electron Microscopy (BEI-SEM) equipped with Energy Dispersive X-ray (EDX) analysis. UV-VIS spectrometry and Inductively Coupled Plasma Mass Spectrometry (ICP-MS) was used for analyzing the release behaviour of silica and yttrium in the two used solutions. The results indicate that the addition of yttrium to a bioactive glass increases its structural stability which therefore, induced a different behaviour of the glasses in simulated body environments.

  12. Simulated evolution of the vertebral body based on basic multicellular unit activities.

    PubMed

    Wang, Chao; Zhang, Chunqiu; Han, Jingyun; Wu, Han; Fan, Yubo

    2011-07-01

    A numerical model based on the theory of bone remodeling is proposed to predict the evolution of trabecular bone architecture within the vertebral body and to investigate the process of degeneration in vertebral bone. In this study, particular attention is paid on the description of microstructure changes during the aging process. To take into account the effect of basic multicellular units (BMUs), a set of computational algorithms has been developed. It is assumed that BMU activation probability depends on the state of damaged bone tissue (damage accumulation, ω), which is evaluated according to previous research concerning bone fatigue damage. Combining these algorithms with the finite-element method (FEM), the microstructure of vertebral bone has been predicted for up to 8 simulated years. Moreover, biomechanical material properties have been monitored to investigate the changes of vertebral bone with age. This study shows that the simulation based on BMU activities has the potential to define and predict the morphological evolution of the vertebral body. It can be concluded that the novel algorithms incorporating the coupled effects of both adaptive remodeling and microdamage remodeling could be utilized to gain greater insight into the mechanism of bone loss in the elderly population.

  13. Evolution of star cluster systems in isolated galaxies: first results from direct N-body simulations

    NASA Astrophysics Data System (ADS)

    Rossi, L. J.; Bekki, K.; Hurley, J. R.

    2016-11-01

    The evolution of star clusters is largely affected by the tidal field generated by the host galaxy. It is thus in principle expected that under the assumption of a `universal' initial cluster mass function the properties of the evolved present-day mass function of star cluster systems should show a dependence on the properties of the galactic environment in which they evolve. To explore this expectation, a sophisticated model of the tidal field is required in order to study the evolution of star cluster systems in realistic galaxies. Along these lines, in this work we first describe a method developed for coupling N-body simulations of galaxies and star clusters. We then generate a data base of galaxy models along the Hubble sequence and calibrate evolutionary equations to the results of direct N-body simulations of star clusters in order to predict the clusters' mass evolution as function of the galactic environment. We finally apply our methods to explore the properties of evolved `universal' initial cluster mass functions and any dependence on the host galaxy morphology and mass distribution. The preliminary results show that an initial power-law distribution of the masses `universally' evolves into a lognormal distribution, with the properties correlated with the stellar mass and stellar mass density of the host galaxy.

  14. Robust human body model injury prediction in simulated side impact crashes.

    PubMed

    Golman, Adam J; Danelson, Kerry A; Stitzel, Joel D

    2016-01-01

    This study developed a parametric methodology to robustly predict occupant injuries sustained in real-world crashes using a finite element (FE) human body model (HBM). One hundred and twenty near-side impact motor vehicle crashes were simulated over a range of parameters using a Toyota RAV4 (bullet vehicle), Ford Taurus (struck vehicle) FE models and a validated human body model (HBM) Total HUman Model for Safety (THUMS). Three bullet vehicle crash parameters (speed, location and angle) and two occupant parameters (seat position and age) were varied using a Latin hypercube design of Experiments. Four injury metrics (head injury criterion, half deflection, thoracic trauma index and pelvic force) were used to calculate injury risk. Rib fracture prediction and lung strain metrics were also analysed. As hypothesized, bullet speed had the greatest effect on each injury measure. Injury risk was reduced when bullet location was further from the B-pillar or when the bullet angle was more oblique. Age had strong correlation to rib fractures frequency and lung strain severity. The injuries from a real-world crash were predicted using two different methods by (1) subsampling the injury predictors from the 12 best crush profile matching simulations and (2) using regression models. Both injury prediction methods successfully predicted the case occupant's low risk for pelvic injury, high risk for thoracic injury, rib fractures and high lung strains with tight confidence intervals. This parametric methodology was successfully used to explore crash parameter interactions and to robustly predict real-world injuries. PMID:26158552

  15. Peculiar velocities in redshift space: formalism, N-body simulations and perturbation theory

    SciTech Connect

    Okumura, Teppei; Seljak, Uroš; Vlah, Zvonimir; Desjacques, Vincent E-mail: useljak@berkeley.edu E-mail: Vincent.Desjacques@unige.ch

    2014-05-01

    Direct measurements of peculiar velocities of galaxies and clusters of galaxies can in principle provide explicit information on the three dimensional mass distribution, but this information is modulated by the fact that velocity field is sampled at galaxy positions, and is thus probing galaxy momentum. We derive expressions for the cross power spectrum between the density and momentum field and the auto spectrum of the momentum field in redshift space, by extending the distribution function method to these statistics. The resulting momentum cross and auto power spectra in redshift space are expressed as infinite sums over velocity moment correlators in real space, as is the case for the density power spectrum in redshift space. We compute each correlator using Eulerian perturbation theory (PT) and halo biasing model and compare the resulting redshift-space velocity statistics to those measured from N-body simulations for both dark matter and halos. We find that in redshift space linear theory predictions for the density-momentum cross power spectrum as well as for the momentum auto spectrum fail to predict the N-body results at very large scales. On the other hand, our nonlinear PT prediction for these velocity statistics, together with real-space power spectrum for dark matter from simulations, improves the accuracy for both dark matter and halos. We also present the same analysis in configuration space, computing the redshift-space pairwise mean infall velocities and velocity correlation function and compare to nonlinear PT.

  16. Biomineralization of hydroxyapatite in silver ion-exchanged nanocrystalline ZSM-5 zeolite using simulated body fluid.

    PubMed

    Kaur, Balwinder; Srivastava, Rajendra; Satpati, Biswarup; Kondepudi, Kanthi Kiran; Bishnoi, Mahendra

    2015-11-01

    Silver ion-exchanged nanocrystalline zeolite (Ag-Nano-ZSM-5) and silver ion-exchanged conventional zeolite (Ag-ZSM-5) were synthesized. Zeolites were incubated in simulated body fluid at 310K for different time periods to grow hydroxyapatite in their matrixes. Significant large amount of hydroxyapatite was grown in Ag-Nano-ZSM-5 matrix after incubation in simulated body fluid when compared to Ag-ZSM-5. The resultant material was characterized using X-ray diffraction, N2-adsorption, scanning/transmission electron microscopy, energy dispersive X-ray, and inductively coupled plasma analysis. Mechanical properties such as compressive modulus, compressive strength, and strain at failure of the parent materials were evaluated. Biocompatibility assays suggested that Ag-Nano-ZSM-5 and hydroxyapatite grown in Ag-Nano-ZSM-5 were compatible and did not impose any toxicity to RAW 264.7 cells macrophase and Caco2 cells suggesting considerable potential for biomedical applications such as bone implants. PMID:26255163

  17. When clusters collide - A numerical Hydro/N-body simulation of merging galaxy clusters

    NASA Technical Reports Server (NTRS)

    Roettiger, Kurt; Burns, Jack; Loken, Chris

    1993-01-01

    A 3D numerical simulation of two merging clusters of galaxies, using a hybrid Hydro/N-body code, is presented. The hydrodynamics of the code is solved by an Eulerian finite difference method. Initial results disclose that the X-ray emission of the dominant cluster becomes elongated and broadened; heating occurs at the core of the dominant cluster as a result of multiple shocks, and high velocity gas motions within the intracluster medium. It is predicted that clusters which have undergone recent mergers and do not have cooling flows will have high peculiar gas velocities and that the shocks and turbulence generated during the merger may power cluster-wide radio halos. Prolonged high-velocity gas motions through the dominant cluster core possibly play a major role in the formation and shaping of wide-angle tailed radio sources associated with central dominant galaxies. The N-body component of the simulation reveals the subcluster to be dispersed as it passes through the dominant cluster.

  18. Quantum Simulation with Circuit-QED Lattices: from Elementary Building Blocks to Many-Body Theory

    NASA Astrophysics Data System (ADS)

    Zhu, Guanyu

    Recent experimental and theoretical progress in superconducting circuits and circuit QED (quantum electrodynamics) has helped to develop high-precision techniques to control, manipulate, and detect individual mesoscopic quantum systems. A promising direction is hence to scale up from individual building blocks to form larger-scale quantum many-body systems. Although realizing a scalable fault-tolerant quantum computer still faces major barriers of decoherence and quantum error correction, it is feasible to realize scalable quantum simulators with state-of-the-art technology. From the technological point of view, this could serve as an intermediate stage towards the final goal of a large-scale quantum computer, and could help accumulating experience with the control of quantum systems with a large number of degrees of freedom. From the physical point of view, this opens up a new regime where condensed matter systems can be simulated and studied, here in the context of strongly correlated photons and two-level systems. In this thesis, we mainly focus on two aspects of circuit-QED based quantum simulation. First, we discuss the elementary building blocks of the quantum simulator, in particular a fluxonium circuit coupled to a superconducting resonator. We show the interesting properties of the fluxonium circuit as a qubit, including the unusual structure of its charge matrix elements. We also employ perturbation theory to derive the effective Hamiltonian of the coupled system in the dispersive regime, where qubit and the photon frequencies are detuned. The observables predicted with our theory, including dispersive shifts and Kerr nonlinearity, are compared with data from experiments, such as homodyne transmission and two-tone spectroscopy. These studies also relate to the problem of detection in a circuit-QED quantum simulator. Second, we study many-body physics of circuit-QED lattices, serving as quantum simulators. In particular, we focus on two different

  19. The GENGA Code: Gravitational Encounters in N-body simulations with GPU Acceleration.

    NASA Astrophysics Data System (ADS)

    Grimm, Simon; Stadel, Joachim

    2013-07-01

    We present a GPU (Graphics Processing Unit) implementation of a hybrid symplectic N-body integrator based on the Mercury Code (Chambers 1999), which handles close encounters with a very good energy conservation. It uses a combination of a mixed variable integration (Wisdom & Holman 1991) and a direct N-body Bulirsch-Stoer method. GENGA is written in CUDA C and runs on NVidia GPU's. The GENGA code supports three simulation modes: Integration of up to 2048 massive bodies, integration with up to a million test particles, or parallel integration of a large number of individual planetary systems. To achieve the best performance, GENGA runs completely on the GPU, where it can take advantage of the very fast, but limited, memory that exists there. All operations are performed in parallel, including the close encounter detection and grouping independent close encounter pairs. Compared to Mercury, GENGA runs up to 30 times faster. Two applications of GENGA are presented: First, the dynamics of planetesimals and the late stage of rocky planet formation due to planetesimal collisions. Second, a dynamical stability analysis of an exoplanetary system with an additional hypothetical super earth, which shows that in some multiple planetary systems, additional super earths could exist without perturbing the dynamical stability of the other planets (Elser et al. 2013).

  20. Investigation of the regenerative capacity of an acellular porcine medial meniscus for tissue engineering applications.

    PubMed

    Stapleton, Thomas W; Ingram, Joanne; Fisher, John; Ingham, Eileen

    2011-01-01

    Previously, we have described the development of an acellular porcine meniscal scaffold. The aims of this study were to determine the immunocompatibility of the scaffold and capacity for cellular attachment and infiltration to gain insight into its potential for meniscal repair and replacement. Porcine menisci were decellularized by exposing the tissue to freeze-thaw cycles, incubation in hypotonic tris buffer, 0.1% (w/v) sodium dodecyl sulfate in hypotonic buffer plus protease inhibitors, nucleases, hypertonic buffer followed by disinfection using 0.1% (v/v) peracetic, and final washing in phosphate-buffered saline. In vivo immunocompatibility was assessed after implantation of the acellular meniscal scaffold subcutaneously into galactosyltransferase knockout mice for 3 months in comparison to fresh and acellular tissue treated with α-galactosidase (negative control). The cellular infiltrates in the explants were assessed by histology and characterized using monoclonal antibodies against: CD3, CD4, CD34, F4/80, and C3c. Static culture was used to assess the potential of acellular porcine meniscal scaffold to support the attachment and infiltration of primary human dermal fibroblasts and primary porcine meniscal cells in vitro. The explants were surrounded by capsules that were more pronounced for the fresh meniscal tissue compared to the acellular tissues. Cellular infiltrates compromised mononuclear phagocytes, CD34-positive cells, and nonlabeled fibroblastic cells. T-lymphocytes were sparse in all explanted tissue types and there was no evidence of C3c deposition. The analysis revealed an absence of a specific immune response to all of the implanted tissues. Acellular porcine meniscus was shown to be capable of supporting the attachment and infiltration of primary human fibroblasts and primary porcine meniscal cells. In conclusion, acellular porcine meniscal tissue exhibits excellent immunocompatibility and potential for cellular regeneration in the longer term.

  1. Dynamic modeling and simulation of multi-body systems using the Udwadia-Kalaba theory

    NASA Astrophysics Data System (ADS)

    Zhao, Han; Zhen, Shengchao; Chen, Ye-Hwa

    2013-09-01

    Laboratory experiments were conducted for falling U-chain, but explicit analytic form of the general equations of motion was not presented. Several modeling methods were developed for fish robots, however they just focused on the whole fish’s locomotion which does little favor to understand the detailed swimming behavior of fish. Udwadia-Kalaba theory is used to model these two multi-body systems and obtain explicit analytic equations of motion. For falling U-chain, the mass matrix is non-singular. Second-order constraints are used to get the constraint force and equations of motion and the numerical simulation is conducted. Simulation results show that the chain tip falls faster than the freely falling body. For fish robot, two-joint Carangiform fish robot is focused on. Quasi-steady wing theory is used to approximately calculate fluid lift force acting on the caudal fin. Based on the obtained explicit analytic equations of motion (the mass matrix is singular), propulsive characteristics of each part of the fish robot are obtained. Through these two cases of U chain and fish robot, how to use Udwadia-Kalaba equation to obtain the dynamical model is shown and the modeling methodology for multi-body systems is presented. It is also shown that Udwadia-Kalaba theory is applicable to systems whether or not their mass matrices are singular. In the whole process of applying Udwadia-Kalaba equation, Lagrangian multipliers and quasi-coordinates are not used. Udwadia-Kalaba theory is creatively applied to dynamical modeling of falling U-chain and fish robot problems and explicit analytic equations of motion are obtained.

  2. Curvilinear Immersed Boundary Method for Simulating Fluid Structure Interaction with Complex 3D Rigid Bodies

    PubMed Central

    Borazjani, Iman; Ge, Liang; Sotiropoulos, Fotis

    2010-01-01

    The sharp-interface CURVIB approach of Ge and Sotiropoulos [L. Ge, F. Sotiropoulos, A Numerical Method for Solving the 3D Unsteady Incompressible Navier-Stokes Equations in Curvilinear Domains with Complex Immersed Boundaries, Journal of Computational Physics 225 (2007) 1782–1809] is extended to simulate fluid structure interaction (FSI) problems involving complex 3D rigid bodies undergoing large structural displacements. The FSI solver adopts the partitioned FSI solution approach and both loose and strong coupling strategies are implemented. The interfaces between immersed bodies and the fluid are discretized with a Lagrangian grid and tracked with an explicit front-tracking approach. An efficient ray-tracing algorithm is developed to quickly identify the relationship between the background grid and the moving bodies. Numerical experiments are carried out for two FSI problems: vortex induced vibration of elastically mounted cylinders and flow through a bileaflet mechanical heart valve at physiologic conditions. For both cases the computed results are in excellent agreement with benchmark simulations and experimental measurements. The numerical experiments suggest that both the properties of the structure (mass, geometry) and the local flow conditions can play an important role in determining the stability of the FSI algorithm. Under certain conditions unconditionally unstable iteration schemes result even when strong coupling FSI is employed. For such cases, however, combining the strong-coupling iteration with under-relaxation in conjunction with the Aitken’s acceleration technique is shown to effectively resolve the stability problems. A theoretical analysis is presented to explain the findings of the numerical experiments. It is shown that the ratio of the added mass to the mass of the structure as well as the sign of the local time rate of change of the force or moment imparted on the structure by the fluid determine the stability and convergence of the

  3. Simulations and experiments on the ignition probability in turbulent premixed bluff-body flames

    NASA Astrophysics Data System (ADS)

    Sitte, Michael Philip; Bach, Ellen; Kariuki, James; Bauer, Hans-Jörg; Mastorakos, Epaminondas

    2016-05-01

    The ignition characteristics of a premixed bluff-body burner under lean conditions were investigated experimentally and numerically with a physical model focusing on ignition probability. Visualisation of the flame with a 5 kHz OH* chemiluminescence camera confirmed that successful ignitions were those associated with the movement of the kernel upstream, consistent with previous work on non-premixed systems. Performing many separate ignition trials at the same spark position and flow conditions resulted in a quantification of the ignition probability Pign, which was found to decrease with increasing distance downstream of the bluff body and a decrease in equivalence ratio. Flows corresponding to flames close to the blow-off limit could not be ignited, although such flames were stable if reached from a richer already ignited condition. A detailed comparison with the local Karlovitz number and the mean velocity showed that regions of high Pign are associated with low Ka and negative bulk velocity (i.e. towards the bluff body), although a direct correlation was not possible. A modelling effort that takes convection and localised flame quenching into account by tracking stochastic virtual flame particles, previously validated for non-premixed and spray ignition, was used to estimate the ignition probability. The applicability of this approach to premixed flows was first evaluated by investigating the model's flame propagation mechanism in a uniform turbulence field, which showed that the model reproduces the bending behaviour of the ST-versus-u‧ curve. Then ignition simulations of the bluff-body burner were carried out. The ignition probability map was computed and it was found that the model reproduces all main trends found in the experimental study.

  4. A Complication Analysis of 2 Acellular Dermal Matrices in Prosthetic-based Breast Reconstruction

    PubMed Central

    Page, Eugenia K.; Hart, Alexandra; Rudderman, Randall; Carlson, Grant W.; Losken, Albert

    2016-01-01

    Background: Acellular dermal matrices (ADM) are now routine in postmastectomy prosthetic-based breast reconstruction. The goal of the current study was to compare the complications of 2 ADM products—AlloDerm and Cortiva. Methods: A retrospective analysis of prosthetic-based breast reconstruction in Atlanta, Ga., over 5 years. Inclusion criteria were the use of the ADM types (AlloDerm or Cortiva) and use of a tissue expander or implant. Statistical analysis compared group demographics, risk factors, and early complications. Results: Of the 298 breast reconstructions, 174 (58.4%) used AlloDerm and 124 (41.6%) used Cortiva. There was no difference in overall complication frequency (16 AlloDerm and 18 Cortiva; P = 0.195). Within specific categories, there was a difference in mastectomy skin flap necrosis, but, based on further regression analysis, this was attributable to differences in body mass index (P = 0.036). Furthermore, there were no differences in the rates of infection (6 AlloDerm and 5 Cortiva; P = 1.0), seroma/hematoma (9 AlloDerm and 7 Cortiva; P = 1.0), or drain duration (13.2 day AlloDerm and 14.2 day Cortiva, P = 0.2). By using a general estimating equation for binomial logistical regression, it was found that only current tobacco use (P = 0.033) was a significant predictor for a complication. Trending predictors were body mass index (P = 0.074) and age (P = 0.093). The type of matrix was not a significant predictor for any of the recorded complication (P = 0.160). Conclusions: Although AlloDerm is well established, we have shown that Cortiva has an equivalent complication frequency. Future work will focus on long-term outcome measures and histological evaluation of vascularization and integration. PMID:27536479

  5. Numerical methods for the simulation of complex multi-body flows with applications for the integrated Space Shuttle vehicle

    NASA Technical Reports Server (NTRS)

    Chan, William M.

    1992-01-01

    The following papers are presented: (1) numerical methods for the simulation of complex multi-body flows with applications for the Integrated Space Shuttle vehicle; (2) a generalized scheme for 3-D hyperbolic grid generation; (3) collar grids for intersecting geometric components within the Chimera overlapped grid scheme; and (4) application of the Chimera overlapped grid scheme to simulation of Space Shuttle ascent flows.

  6. Comparative biological activities of acellular pertussis vaccines produced by Kitasato.

    PubMed

    Watanabe, M; Izumiya, K; Sato, T; Yoshino, K; Nakagawa, N; Ohoishi, M; Hoshino, M

    1991-04-01

    The quality of 14 lots of acellular pertussis-diphtheria-tetanus (AC-PDT) vaccines manufactured by the Kitasato Institute during the period 1987-1990 were investigated. The geometric means of HSU, LPU, and BWDU were 0.078, 0.257, and 7.33 per ml respectively. The potency was higher than 14 IU per ml. These results indicated the consistency of the Kitasato AC-PDT vaccines. The antibody response to the AC-PDT vaccines was measured in primary and secondary vaccinated mice by ELISA. IgG antibody response to FHA and PT was obtained in all immunized mice (P less than 0.001) after the primary injection. In contrast, IgG antibody response to fimbriae 2 showed a significant titer rise (P less than 0.001) after the booster injection. The results indicated that the Kitasato AC-P vaccines consisted of protein, PT and FHA as the major antigens, and a little agglutinogen as the minor antigen. PMID:1798236

  7. Characterization of co-purified acellular pertussis vaccines.

    PubMed

    Xu, Yinghua; Tan, Yajun; Asokanathan, Catpagavalli; Zhang, Shumin; Xing, Dorothy; Wang, Junzhi

    2015-01-01

    Whole-cell pertussis vaccines (WPVs) have been completely replaced by the co-purified acellular vaccines (APVs) in China. To date few laboratory studies were reported for co-purified APVs in terms of their antigenic composition and protective immune responses. To further understand the antigenic composition in co-purified APVs, in the present study 2-dimensional gel electrophoresis-based proteomic technology was used to analyze the composition of co-purified APVs. The results showed that besides the main antigens pertussis toxin (PT) and filamentous hemagglutinin (FHA), co-purified APVs also contained pertactin (PRN), fimbriae (FIM) 2and3 and other minor protein antigens. Of the 9 proteins identified, 3 were differentially presented in products from manufacturer 1 and manufacturer 2. Compared with WPVs and purified APVs, co-purified APVs induced a mixed Th1/Th2 immune response with more toward to a Th1 response than the purified APVs in this study. These results hint that different immune mechanisms might be involved in protection induced by co-purified and purified APVs.

  8. Characterization of co-purified acellular pertussis vaccines

    PubMed Central

    Xu, Yinghua; Tan, Yajun; Asokanathan, Catpagavalli; Zhang, Shumin; Xing, Dorothy; Wang, Junzhi

    2015-01-01

    Whole-cell pertussis vaccines (WPVs) have been completely replaced by the co-purified acellular vaccines (APVs) in China. To date few laboratory studies were reported for co-purified APVs in terms of their antigenic composition and protective immune responses. To further understand the antigenic composition in co-purified APVs, in the present study 2-dimensional gel electrophoresis-based proteomic technology was used to analyze the composition of co-purified APVs. The results showed that besides the main antigens pertussis toxin (PT) and filamentous hemagglutinin (FHA), co-purified APVs also contained pertactin (PRN), fimbriae (FIM) 2and3 and other minor protein antigens. Of the 9 proteins identified, 3 were differentially presented in products from manufacturer 1 and manufacturer 2. Compared with WPVs and purified APVs, co-purified APVs induced a mixed Th1/Th2 immune response with more toward to a Th1 response than the purified APVs in this study. These results hint that different immune mechanisms might be involved in protection induced by co-purified and purified APVs. PMID:25610957

  9. `Grandeur in this view of life': N-body simulation models of the Galactic habitable zone

    NASA Astrophysics Data System (ADS)

    Vukotić, B.; Steinhauser, D.; Martinez-Aviles, G.; Ćirković, M. M.; Micic, M.; Schindler, S.

    2016-07-01

    We present an isolated Milky-Way-like simulation in the GADGET2 N-body smoothed particle hydrodynamics (SPH) code. The Galactic disc star formation rate (SFR) surface densities and a stellar mass indicative of the Solar neighbourhood are used as thresholds to model the distribution of stellar mass in life-friendly environments. SFR and stellar component density are calculated by averaging the GADGET2 particle properties on a 2D grid mapped on the Galactic plane. The peak values for possibly habitable stellar mass surface density move from 10 to 15 kpc cylindrical galactocentric distance in a 10-Gyr simulated time span. At 10 Gyr, the simulation results imply the following. Stellar particles that have spent almost all of their lifetime in habitable-friendly conditions typically reside at ˜16 kpc from the Galactic Centre and are ˜3 Gyr old. Stellar particles that have spent ≥90 per cent of their 4-5 Gyr long lifetime in habitable-friendly conditions are also predominantly found in the outskirts of the Galactic disc. Fewer than 1 per cent of these particles can be found at a typical Solar system galactocentric distance of 8-10 kpc. Our results imply that the evolution of an isolated spiral galaxy is likely to result in galactic civilizations emerging at the outskirts of the galactic disc around stellar hosts younger than the Sun.

  10. N-body simulations of terrestrial planet formation under the influence of a hot Jupiter

    SciTech Connect

    Ogihara, Masahiro; Kobayashi, Hiroshi; Inutsuka, Shu-ichiro E-mail: ogihara@nagoya-u.jp

    2014-06-01

    We investigate the formation of multiple-planet systems in the presence of a hot Jupiter (HJ) using extended N-body simulations that are performed simultaneously with semianalytic calculations. Our primary aims are to describe the planet formation process starting from planetesimals using high-resolution simulations, and to examine the dependences of the architecture of planetary systems on input parameters (e.g., disk mass, disk viscosity). We observe that protoplanets that arise from oligarchic growth and undergo type I migration stop migrating when they join a chain of resonant planets outside the orbit of an HJ. The formation of a resonant chain is almost independent of our model parameters, and is thus a robust process. At the end of our simulations, several terrestrial planets remain at around 0.1 AU. The formed planets are not equal mass; the largest planet constitutes more than 50% of the total mass in the close-in region, which is also less dependent on parameters. In the previous work of this paper, we have found a new physical mechanism of induced migration of the HJ, which is called a crowding-out. If the HJ opens up a wide gap in the disk (e.g., owing to low disk viscosity), crowding-out becomes less efficient and the HJ remains. We also discuss angular momentum transfer between the planets and disk.

  11. Direct Large-Scale N-Body Simulations of Planetesimal Dynamics

    NASA Astrophysics Data System (ADS)

    Richardson, Derek C.; Quinn, Thomas; Stadel, Joachim; Lake, George

    2000-01-01

    We describe a new direct numerical method for simulating planetesimal dynamics in which N˜10 6 or more bodies can be evolved simultaneously in three spatial dimensions over hundreds of dynamical times. This represents several orders of magnitude improvement in resolution over previous studies. The advance is made possible through modification of a stable and tested cosmological code optimized for massively parallel computers. However, owing to the excellent scalability and portability of the code, modest clusters of workstations can treat problems with N˜10 5 particles in a practical fashion. The code features algorithms for detection and resolution of collisions and takes into account the strong central force field and flattened Keplerian disk geometry of planetesimal systems. We demonstrate the range of problems that can be addressed by presenting simulations that illustrate oligarchic growth of protoplanets, planet formation in the presence of giant planet perturbations, the formation of the jovian moons, and orbital migration via planetesimal scattering. We also describe methods under development for increasing the timescale of the simulations by several orders of magnitude.

  12. ATOMISTIC SIMULATIONS OF DIFFUSIONAL CREEP IN A NANOCRYSTALLINE BODY-CENTERED CUBIC MATERIAL

    SciTech Connect

    Paul C. Millett; Tapan Desai; Vesselin Yamakov; Dieter Wolf

    2008-08-01

    Molecular dynamics (MD) simulations are used to study diffusion-accommodated creep deformation in nanocrystalline molybdenum, a body-centered cubic metal. In our simulations, the microstructures are subjected to constant-stress loading at levels below the dislocation nucleation threshold and at high temperatures (i.e., T > 0.75Tmelt), thereby ensuring that the overall deformation is indeed attributable to atomic self-diffusion. The initial microstructures were designed to consist of hexagonally shaped columnar grains bounded by high-energy asymmetric tilt grain boundaries (GBs). Remarkably the creep rates, which exhibit a double-exponential dependence on temperature and a double power-law dependence on grain size, indicate that both GB diffusion in the form of Coble creep and lattice diffusion in the form of Nabarro–Herring creep contribute to the overall deformation. For the first time in an MD simulation, we observe the formation and emission of vacancies from high-angle GBs into the grain interiors, thus enabling bulk diffusion.

  13. Driving Competence in Mild Dementia with Lewy Bodies: In Search of Cognitive Predictors Using Driving Simulation

    PubMed Central

    Yamin, Stephanie; Stinchcombe, Arne; Gagnon, Sylvain

    2015-01-01

    Driving is a multifactorial behaviour drawing on multiple cognitive, sensory, and physical systems. Dementia is a progressive and degenerative neurological condition that impacts the cognitive processes necessary for safe driving. While a number of studies have examined driving among individuals with Alzheimer's disease, less is known about the impact of Dementia with Lewy Bodies (DLB) on driving safety. The present study compared simulated driving performance of 15 older drivers with mild DLB with that of 21 neurologically healthy control drivers. DLB drivers showed poorer performance on all indicators of simulated driving including an increased number of collisions in the simulator and poorer composite indicators of overall driving performance. A measure of global cognitive function (i.e., the Mini Mental State Exam) was found to be related to the overall driving performance. In addition, measures of attention (i.e., Useful Field of View, UFOV) and space processing (Visual Object and Space Perception, VOSP, Test) correlated significantly with a rater's assessment of driving performance. PMID:26713169

  14. Shock-Generated Cosmic Rays in AMR Hydro/N-body Cosmological Simulations

    NASA Astrophysics Data System (ADS)

    Skillman, Samuel W.; O'Shea, B. W.; Hallman, E. J.; Burns, J. O.; Norman, M. L.

    2007-12-01

    Shock waves in cosmological simulations arise due to supersonic accretion onto large scale structures such as filaments and galaxy clusters as well as from complex flows within the clusters themselves. Along with thermal dissipation due to shock heating, cosmic rays can be generated through diffusive shock acceleration (DSA). By using the results from one-dimensional DSA simulations, we compute the energy dissipation into non-thermal cosmic ray particles from shocks. This cosmic ray pressure is found to be a significant fraction of the total thermal pressure, suggesting that in order to perform precision cosmological studies with galaxy clusters, this additional non-thermal physics must be included. Here we present new numerical simulations using a Hydro/N-body Adaptive Mesh Refinement (AMR) code, ENZO, to analyze cosmic ray generation. Whereas previous analyses have been performed on a fixed grid or within individual galaxy clusters, we are able for the first time to study cosmic ray generation over a spatial dynamic range of up to 2^8. In addition, a shock-finding algorithm has been developed that does not rely on studying shock waves in each of the three coordinate directions separately. Instead, our algorithm casts a ray in the direction of the shock propagation and then determines the Mach number using Rankine-Hyugenot jump conditions for the adiabatic gas.

  15. Experimental quantum simulations of many-body physics with trapped ions.

    PubMed

    Schneider, Ch; Porras, Diego; Schaetz, Tobias

    2012-02-01

    Direct experimental access to some of the most intriguing quantum phenomena is not granted due to the lack of precise control of the relevant parameters in their naturally intricate environment. Their simulation on conventional computers is impossible, since quantum behaviour arising with superposition states or entanglement is not efficiently translatable into the classical language. However, one could gain deeper insight into complex quantum dynamics by experimentally simulating the quantum behaviour of interest in another quantum system, where the relevant parameters and interactions can be controlled and robust effects detected sufficiently well. Systems of trapped ions provide unique control of both the internal (electronic) and external (motional) degrees of freedom. The mutual Coulomb interaction between the ions allows for large interaction strengths at comparatively large mutual ion distances enabling individual control and readout. Systems of trapped ions therefore exhibit a prominent system in several physical disciplines, for example, quantum information processing or metrology. Here, we will give an overview of different trapping techniques of ions as well as implementations for coherent manipulation of their quantum states and discuss the related theoretical basics. We then report on the experimental and theoretical progress in simulating quantum many-body physics with trapped ions and present current approaches for scaling up to more ions and more-dimensional systems.

  16. Large eddy simulation of the flow around bluff body with drag reduction device

    NASA Astrophysics Data System (ADS)

    Al-Anazi, Khalid Qaied

    This thesis focuses on the use of LES to simulate the flow around elliptical bluff body with blunt trailing edge fitted with open base cavity. The main objective of this study is to determine the effects of the cavity on the drag of the body. A secondary but important objective is to demonstrate that LES can provide accurate representation of the flow around this bluff body. Moreover, LES results can complement the available experimental results in order to provide a much better understanding of the flow. The simulations were carried out at a Reynolds number of 2.6×104 based on the height of the body using Spalart-Allmaras RANS model while the LES were performed using Smagorinsky dynamic model. A grid-independence test was conducted using three grids which contain 0.85M, 1.3M and 1.7M cells, respectively. This test shows that the results are grid-independent. The LES results predicted the mean flow field in the near wake with good accuracy as compared to the experimental mean flow field obtained. The base pressure results show that the base pressure coefficient for the base model was around -0.56, which agrees well with the experimental results .By attaching the cavity, the base pressure has increased. The increase in base pressure coefficient was around 44% using 1/3 h cavity and this agrees well with the experimental measurements. The RANS predicted drag coefficient of 0.56 for the base model and 0.471 for the cavity model. This represents a difference of 8% for the base model and 34% for the cavity model when compared with experiment drag coefficients (0.61 for the base model and 0.35 for the cavity model). For the LES, the drag coefficient of the base model was around 0.65 (6.5% difference) and using the cavity, the drag coefficient was reduced to around 0.37 (5.74% difference). Details of the mean velocity components have been compared with experimental data at various locations in the wake region of the flow. Observation on the comparison between LES and

  17. Angiogenic response induced by acellular brain scaffolds grafted onto the chick embryo chorioallantoic membrane.

    PubMed

    Ribatti, Domenico; Conconi, Maria Teresa; Nico, Beatrice; Baiguera, Silvia; Corsi, Patrizia; Parnigotto, Pier Paolo; Nussdorfer, Gastone G

    2003-10-31

    The repair and regeneration of injured tissues and organs depend on the re-establishment of the blood flow needed for cellular infiltration and metabolic support. Among the various materials used in tissue reconstruction, acellular scaffolds have recently been utilized. In this study, we investigated the angiogenic response induced by acellular brain scaffolds implanted in vivo onto the chick embryo chorioallantoic membrane (CAM), a useful model for such investigations. The results show that acellular brain scaffolds are able to induce a strong angiogenic response, comparable to that of fibroblast growth factor-2 (FGF-2), a well known angiogenic cytokine. The response may be considered dependent on a direct angiogenic effect exerted by the scaffold, because no inflammatory infiltrate was detectable in CAM's mesenchyme beneath the implant. Acellular brain scaffolds might induce the release of endogenous angiogenic factors, such as FGF-2 and vascular endothelial growth factor (VEGF) released from the extracellular matrix of the developing CAM. In addition, the angiogenic response may depend, in part, also on the presence in the acellular matrix of transforming growth factor beta 1 (TGFbeta1).

  18. N-BODY SIMULATION OF PLANETESIMAL FORMATION THROUGH GRAVITATIONAL INSTABILITY AND COAGULATION. II. ACCRETION MODEL

    SciTech Connect

    Michikoshi, Shugo; Kokubo, Eiichiro; Inutsuka, Shu-ichiro E-mail: kokubo@th.nao.ac.j

    2009-10-01

    The gravitational instability of a dust layer is one of the scenarios for planetesimal formation. If the density of a dust layer becomes sufficiently high as a result of the sedimentation of dust grains toward the midplane of a protoplanetary disk, the layer becomes gravitationally unstable and spontaneously fragments into planetesimals. Using a shearing box method, we performed local N-body simulations of gravitational instability of a dust layer and subsequent coagulation without gas and investigated the basic formation process of planetesimals. In this paper, we adopted the accretion model as a collision model. A gravitationally bound pair of particles is replaced by a single particle with the total mass of the pair. This accretion model enables us to perform long-term and large-scale calculations. We confirmed that the formation process of planetesimals is the same as that in the previous paper with the rubble pile models. The formation process is divided into three stages: the formation of nonaxisymmetric structures; the creation of planetesimal seeds; and their collisional growth. We investigated the dependence of the planetesimal mass on the simulation domain size. We found that the mean mass of planetesimals formed in simulations is proportional to L {sup 3/2} {sub y}, where L{sub y} is the size of the computational domain in the direction of rotation. However, the mean mass of planetesimals is independent of L{sub x} , where L{sub x} is the size of the computational domain in the radial direction if L{sub x} is sufficiently large. We presented the estimation formula of the planetesimal mass taking into account the simulation domain size.

  19. Charge-dependent many-body exchange and dispersion interactions in combined QM/MM simulations

    NASA Astrophysics Data System (ADS)

    Kuechler, Erich R.; Giese, Timothy J.; York, Darrin M.

    2015-12-01

    Accurate modeling of the molecular environment is critical in condensed phase simulations of chemical reactions. Conventional quantum mechanical/molecular mechanical (QM/MM) simulations traditionally model non-electrostatic non-bonded interactions through an empirical Lennard-Jones (LJ) potential which, in violation of intuitive chemical principles, is bereft of any explicit coupling to an atom's local electronic structure. This oversight results in a model whereby short-ranged exchange-repulsion and long-ranged dispersion interactions are invariant to changes in the local atomic charge, leading to accuracy limitations for chemical reactions where significant atomic charge transfer can occur along the reaction coordinate. The present work presents a variational, charge-dependent exchange-repulsion and dispersion model, referred to as the charge-dependent exchange and dispersion (QXD) model, for hybrid QM/MM simulations. Analytic expressions for the energy and gradients are provided, as well as a description of the integration of the model into existing QM/MM frameworks, allowing QXD to replace traditional LJ interactions in simulations of reactive condensed phase systems. After initial validation against QM data, the method is demonstrated by capturing the solvation free energies of a series of small, chlorine-containing compounds that have varying charge on the chlorine atom. The model is further tested on the SN2 attack of a chloride anion on methylchloride. Results suggest that the QXD model, unlike the traditional LJ model, is able to simultaneously obtain accurate solvation free energies for a range of compounds while at the same time closely reproducing the experimental reaction free energy barrier. The QXD interaction model allows explicit coupling of atomic charge with many-body exchange and dispersion interactions that are related to atomic size and provides a more accurate and robust representation of non-electrostatic non-bonded QM/MM interactions.

  20. Charge-dependent many-body exchange and dispersion interactions in combined QM/MM simulations.

    PubMed

    Kuechler, Erich R; Giese, Timothy J; York, Darrin M

    2015-12-21

    Accurate modeling of the molecular environment is critical in condensed phase simulations of chemical reactions. Conventional quantum mechanical/molecular mechanical (QM/MM) simulations traditionally model non-electrostatic non-bonded interactions through an empirical Lennard-Jones (LJ) potential which, in violation of intuitive chemical principles, is bereft of any explicit coupling to an atom's local electronic structure. This oversight results in a model whereby short-ranged exchange-repulsion and long-ranged dispersion interactions are invariant to changes in the local atomic charge, leading to accuracy limitations for chemical reactions where significant atomic charge transfer can occur along the reaction coordinate. The present work presents a variational, charge-dependent exchange-repulsion and dispersion model, referred to as the charge-dependent exchange and dispersion (QXD) model, for hybrid QM/MM simulations. Analytic expressions for the energy and gradients are provided, as well as a description of the integration of the model into existing QM/MM frameworks, allowing QXD to replace traditional LJ interactions in simulations of reactive condensed phase systems. After initial validation against QM data, the method is demonstrated by capturing the solvation free energies of a series of small, chlorine-containing compounds that have varying charge on the chlorine atom. The model is further tested on the SN2 attack of a chloride anion on methylchloride. Results suggest that the QXD model, unlike the traditional LJ model, is able to simultaneously obtain accurate solvation free energies for a range of compounds while at the same time closely reproducing the experimental reaction free energy barrier. The QXD interaction model allows explicit coupling of atomic charge with many-body exchange and dispersion interactions that are related to atomic size and provides a more accurate and robust representation of non-electrostatic non-bonded QM/MM interactions.

  1. Charge-dependent many-body exchange and dispersion interactions in combined QM/MM simulations.

    PubMed

    Kuechler, Erich R; Giese, Timothy J; York, Darrin M

    2015-12-21

    Accurate modeling of the molecular environment is critical in condensed phase simulations of chemical reactions. Conventional quantum mechanical/molecular mechanical (QM/MM) simulations traditionally model non-electrostatic non-bonded interactions through an empirical Lennard-Jones (LJ) potential which, in violation of intuitive chemical principles, is bereft of any explicit coupling to an atom's local electronic structure. This oversight results in a model whereby short-ranged exchange-repulsion and long-ranged dispersion interactions are invariant to changes in the local atomic charge, leading to accuracy limitations for chemical reactions where significant atomic charge transfer can occur along the reaction coordinate. The present work presents a variational, charge-dependent exchange-repulsion and dispersion model, referred to as the charge-dependent exchange and dispersion (QXD) model, for hybrid QM/MM simulations. Analytic expressions for the energy and gradients are provided, as well as a description of the integration of the model into existing QM/MM frameworks, allowing QXD to replace traditional LJ interactions in simulations of reactive condensed phase systems. After initial validation against QM data, the method is demonstrated by capturing the solvation free energies of a series of small, chlorine-containing compounds that have varying charge on the chlorine atom. The model is further tested on the SN2 attack of a chloride anion on methylchloride. Results suggest that the QXD model, unlike the traditional LJ model, is able to simultaneously obtain accurate solvation free energies for a range of compounds while at the same time closely reproducing the experimental reaction free energy barrier. The QXD interaction model allows explicit coupling of atomic charge with many-body exchange and dispersion interactions that are related to atomic size and provides a more accurate and robust representation of non-electrostatic non-bonded QM/MM interactions. PMID

  2. Charge-dependent many-body exchange and dispersion interactions in combined QM/MM simulations

    SciTech Connect

    Kuechler, Erich R.; Giese, Timothy J.; York, Darrin M.

    2015-12-21

    Accurate modeling of the molecular environment is critical in condensed phase simulations of chemical reactions. Conventional quantum mechanical/molecular mechanical (QM/MM) simulations traditionally model non-electrostatic non-bonded interactions through an empirical Lennard-Jones (LJ) potential which, in violation of intuitive chemical principles, is bereft of any explicit coupling to an atom’s local electronic structure. This oversight results in a model whereby short-ranged exchange-repulsion and long-ranged dispersion interactions are invariant to changes in the local atomic charge, leading to accuracy limitations for chemical reactions where significant atomic charge transfer can occur along the reaction coordinate. The present work presents a variational, charge-dependent exchange-repulsion and dispersion model, referred to as the charge-dependent exchange and dispersion (QXD) model, for hybrid QM/MM simulations. Analytic expressions for the energy and gradients are provided, as well as a description of the integration of the model into existing QM/MM frameworks, allowing QXD to replace traditional LJ interactions in simulations of reactive condensed phase systems. After initial validation against QM data, the method is demonstrated by capturing the solvation free energies of a series of small, chlorine-containing compounds that have varying charge on the chlorine atom. The model is further tested on the S{sub N}2 attack of a chloride anion on methylchloride. Results suggest that the QXD model, unlike the traditional LJ model, is able to simultaneously obtain accurate solvation free energies for a range of compounds while at the same time closely reproducing the experimental reaction free energy barrier. The QXD interaction model allows explicit coupling of atomic charge with many-body exchange and dispersion interactions that are related to atomic size and provides a more accurate and robust representation of non-electrostatic non-bonded QM

  3. The shape of the invisible halo: N-body simulations on parallel supercomputers

    SciTech Connect

    Warren, M.S.; Zurek, W.H. ); Quinn, P.J. . Mount Stromlo and Siding Spring Observatories); Salmon, J.K. )

    1990-01-01

    We study the shapes of halos and the relationship to their angular momentum content by means of N-body (N {approximately} 10{sup 6}) simulations. Results indicate that in relaxed halos with no apparent substructure: (i) the shape and orientation of the isodensity contours tends to persist throughout the virialised portion of the halo; (ii) most ({approx}70%) of the halos are prolate; (iii) the approximate direction of the angular momentum vector tends to persist throughout the halo; (iv) for spherical shells centered on the core of the halo the magnitude of the specific angular momentum is approximately proportional to their radius; (v) the shortest axis of the ellipsoid which approximates the shape of the halo tends to align with the rotation axis of the halo. This tendency is strongest in the fastest rotating halos. 13 refs., 4 figs.

  4. Measured force on elongated bodies in a simulated low-Earth orbit environment

    SciTech Connect

    Maldonado, C. A.; Ketsdever, A. D.; Gimelshein, S. F.

    2014-12-09

    An overview of the development of a magnetically filtered atomic oxygen plasma source and the application of the source to study low-Earth orbit drag on elongated bodies is presented. Plasma diagnostics show that the magnetic filter plasma source produces atomic oxygen ions (O{sup +}) with streaming energies equivalent to the relative orbital environment of approximately 5eV and can supply the appropriate density for LEO simulation. Previous research has demonstrated that momentum transfer between ions and metal surfaces is equivalent to the momentum transfer expected for neutral molecules with similar energy, due to charge exchange occurring prior to momentum transfer. Total drag measurements of aluminum cuboid geometries of varying length to diameter ratios immersed in the extracted plasma plume are presented as a function of streaming ion energy.

  5. Visualizing a Large-Scale Structure of Production Network by N-Body Simulation

    NASA Astrophysics Data System (ADS)

    Fujiwara, Y.

    Our recent study of a nation-wide production network uncovered acommunity structure, namely how firms are connected by supplier-customer links into tightly-knit groups with high density in intra-groups and with lower connectivity in inter-groups. Here we propose a method to visualize the community structure by a graph layout based on a physical analogy. The layout can be calculated in a practical computation-time and is possible to be accelerated by a special-purpose device of GRAPE (gravity pipeline) developed for astrophysical N-body simulation. We show that the method successfully identifies the communities in a hierarchical way by applying it to the manufacturing sector comprising tenth million nodes and a half million edges. In addition, we discuss several limitations of this method, and propose a possible way to avoid all those problems.

  6. Deposition of hydroxyapatite on SiC nanotubes in simulated body fluid.

    PubMed

    Taguchi, Tomitsugu; Miyazaki, Toshiki; Iikubo, Satoshi; Yamaguchi, Kenji

    2014-01-01

    SiC nanotubes can become candidate reinforcement materials for dental and orthopedic implants due to their light weight and excellent mechanical properties. However, the development of bioactive SiC materials has not been reported. In this study, hydroxyapatites were found on SiC nanotubes treated with NaOH and subsequently HCl solution after soaking in simulated body fluid. On the other hand, hydroxyapatites did not deposit on as-received SiC nanotubes, the SiC nanotubes with NH4OH solution treatment and SiC bulk materials with NaOH and subsequently HCl solution treatment. Therefore, we succeeded in the development of bioactive SiC nanotubes by downsizing SiC materials to nanometer size and treating with NaOH and subsequently HCl solutions for the first time.

  7. CIRCUMBINARY PLANET FORMATION IN THE KEPLER-16 SYSTEM. I. N-BODY SIMULATIONS

    SciTech Connect

    Meschiari, Stefano

    2012-06-10

    The recently discovered circumbinary planets (Kepler-16 b, Kepler 34-b, Kepler 35-b) represent the first direct evidence of the viability of planet formation in circumbinary orbits. We report on the results of N-body simulations investigating planetesimal accretion in the Kepler-16 b system, focusing on the range of impact velocities under the influence of both stars' gravitational perturbation and friction from a putative protoplanetary disk. Our results show that planet formation might be effectively inhibited for a large range in semimajor axis (1.75 {approx}< a{sub P} {approx}< 4 AU), suggesting that the planetary core must have either migrated from outside 4 AU or formed in situ very close to its current location.

  8. REBOUNDx: A library for adding additional effects to N-body simulations

    NASA Astrophysics Data System (ADS)

    Tamayo, Daniel; Rein, Hanno; Shi, Pengshuai

    2016-05-01

    Many astrophysical applications involve additional perturbations beyond point-source gravity. We have recently developed REBOUNDx, a library for adding such effects in numerical simulations with the open-source N-body package REBOUND. Various implementations have different numerical properties that in general depend on the underlying integrator employed. In particular, I will discuss adding velocity-dependent/dissipative effects to widely used symplectic integrators, and how one can estimate the introduced numerical errors using the operator-splitting formalism traditionally applied to symplectic integrators. Finally, I will demonstrate how to use the code, and how the Python wrapper we have developed for REBOUND/REBOUNDx makes it easy to interactively leverage powerful analysis, visualization and parallelization libraries.

  9. Digital quantum simulation of many-body non-Markovian dynamics

    NASA Astrophysics Data System (ADS)

    Sweke, R.; Sanz, M.; Sinayskiy, I.; Petruccione, F.; Solano, E.

    2016-08-01

    We present an algorithmic method for the digital quantum simulation of many-body locally indivisible non-Markovian open quantum systems. It consists of two parts: first, a Suzuki-Lie-Trotter decomposition of the global system propagator into the product of subsystem propagators, which may not be quantum channels, and second, an algorithmic procedure for the implementation of the subsystem propagators through unitary operations and measurements on a dilated space. By providing rigorous error bounds for the relevant Suzuki-Lie-Trotter decomposition, we are able to analyze the efficiency of the method, and connect it with an appropriate measure of the local indivisibility of the system. In light of our analysis, the proposed method is expected to be experimentally achievable for a variety of interesting cases.

  10. Unsteady Navier-Stokes simulation of the canard-wing-body ramp motion

    NASA Technical Reports Server (NTRS)

    Tu, Eugene L.; Obayashi, Shigeru; Guruswamy, Guru P.

    1993-01-01

    A time-accurate thin-layer Navier-Stokes simulation of the unsteady flowfield is performed for a typical canard-wing-body configuration undergoing ramp motions. The computations are made at a transonic Mach number of 0.90 and for ramp angles from 0 to 15 degrees. Accuracy is determined by comparisons with steady-state experimental data and with spatial and time-step refinement studies. During the ramp motion, the computational results show improved dynamic lift performance and a strong canard-wing interaction for the canard-on configuration. Formation of the canard leading-edge vortex is inhibited in the early stages of the ramp motion. An analysis performed on the transient flowfield after the ramp motion ends shows that the canard vortex rapidly gains strength and vortex breakdown eventually occurs. These characteristics of the canard vortex have significant influences on wing performance.

  11. Sub-discretized surface model with application to contact mechanics in multi-body simulation

    SciTech Connect

    Johnson, S; Williams, J

    2008-02-28

    The mechanics of contact between rough and imperfectly spherical adhesive powder grains are often complicated by a variety of factors, including several which vary over sub-grain length scales. These include several traction factors that vary spatially over the surface of the individual grains, including high energy electron and acceptor sites (electrostatic), hydrophobic and hydrophilic sites (electrostatic and capillary), surface energy (general adhesion), geometry (van der Waals and mechanical), and elasto-plastic deformation (mechanical). For mechanical deformation and reaction, coupled motions, such as twisting with bending and sliding, as well as surface roughness add an asymmetry to the contact force which invalidates assumptions for popular models of contact, such as the Hertzian and its derivatives, for the non-adhesive case, and the JKR and DMT models for adhesive contacts. Though several contact laws have been offered to ameliorate these drawbacks, they are often constrained to particular loading paths (most often normal loading) and are relatively complicated for computational implementation. This paper offers a simple and general computational method for augmenting contact law predictions in multi-body simulations through characterization of the contact surfaces using a hierarchically-defined surface sub-discretization. For the case of adhesive contact between powder grains in low stress regimes, this technique can allow a variety of existing contact laws to be resolved across scales, allowing for moments and torques about the contact area as well as normal and tangential tractions to be resolved. This is especially useful for multi-body simulation applications where the modeler desires statistical distributions and calibration for parameters in contact laws commonly used for resolving near-surface contact mechanics. The approach is verified against analytical results for the case of rough, elastic spheres.

  12. Study of variation in human upper body parameters and motion for use in robotics based simulation.

    PubMed

    Lura, Derek J; Carey, Stephanie L; Dubey, Rajiv V

    2013-01-01

    This paper reviews the variations in human upper body motion of subjects completing activities of daily living. This study was completed to serve as a reference to evaluate the quality of simulated of human motion. In this paper we define the variation in motion as the variation in subjects' parameters (link lengths), joint angles, and hand positions, for a given task. All of these variations are related by forward kinematic equations. Motion data from eight healthy right hand dominant adults performing three activities of daily living (brushing hair, drinking from a cup, and opening a door) were collected using an eight camera Vicon motion analysis system. Subject parameters were calculated using relative positions of functional joint center locations between segments. Joint angles were calculated by Euler angle rotations between body segments. Hand position was defined as the origin of the hand frame relative to the pelvis frame. The variance of recorded human motion was analyzed based on the standard deviations of subject parameters, joint angles, and hand positions. Variances in joint angles were found to be similar in magnitude to root mean squared error of kinematics based motion simulation. To evaluate the relative variance, the forward kinematic solutions of the trials were found after removing subject parameter variance and reducing joint angle variance. The variance in the forward kinematic solution was then compared to the recorded hand position variance. Reductions in subject parameter and joint angle variance produced a proportionally much smaller reduction in the calculated hand position variance. Using the average instead of individual subject parameters had only a small impact on hand position variance. Modifying joint angles to reduce variance had a greater impact on the calculated hand position variance than using average subject parameters, but was still a relatively small change. Future work will focus on using these results to create formalized

  13. Simulated Body Fluid Nucleation of Three-Dimensional Printed Elastomeric Scaffolds for Enhanced Osteogenesis.

    PubMed

    Castro, Nathan J; Tan, Wilhelmina Nanrui; Shen, Charlie; Zhang, Lijie Grace

    2016-07-01

    Osseous tissue defects caused by trauma present a common clinical problem. Although traditional clinical procedures have been successfully employed, several limitations persist with regards to insufficient donor tissue, disease transmission, and inadequate host-implant integration. Therefore, this work aims to address current limitations regarding inadequate host tissue integration through the use of a novel elastomeric material for three-dimensional (3D) printing biomimetic and bioactive scaffolds. A novel thermoplastic polyurethane-based elastomeric composite filament (Gel-Lay) was used to manufacture porous scaffolds. In an effort to render the scaffolds more bioactive, the flexible scaffolds were subsequently incubated in simulated body fluid at various time points and evaluated for enhanced mechanical properties along with the effects on cell adhesion, proliferation, and 3-week osteogenesis. This work is the first reported use of a novel class of flexible elastomeric materials for the manufacture of 3D printed bioactive scaffold fabrication allowing efficient and effective nucleation of hydroxyapatite (HA) leading to increased nanoscale surface roughness while retaining the bulk geometry of the predesigned structure. Scaffolds with interconnected microfibrous filaments of ∼260 μm were created and nucleated in simulated body fluid that facilitated cell adhesion and spreading after only 24 h in culture. The porous structure further allowed efficient nucleation, exchange of nutrients, and metabolic waste removal during new tissue formation. Through the incorporation of osteoconductive HA, human fetal osteoblast adhesion and differentiation were greatly enhanced thus setting the tone for further exploration of this novel material for biomedical and tissue regenerative applications. PMID:27298115

  14. The GENGA code: gravitational encounters in N-body simulations with GPU acceleration

    SciTech Connect

    Grimm, Simon L.; Stadel, Joachim G.

    2014-11-20

    We describe an open source GPU implementation of a hybrid symplectic N-body integrator, GENGA (Gravitational ENcounters with Gpu Acceleration), designed to integrate planet and planetesimal dynamics in the late stage of planet formation and stability analyses of planetary systems. GENGA uses a hybrid symplectic integrator to handle close encounters with very good energy conservation, which is essential in long-term planetary system integration. We extended the second-order hybrid integration scheme to higher orders. The GENGA code supports three simulation modes: integration of up to 2048 massive bodies, integration with up to a million test particles, or parallel integration of a large number of individual planetary systems. We compare the results of GENGA to Mercury and pkdgrav2 in terms of energy conservation and performance and find that the energy conservation of GENGA is comparable to Mercury and around two orders of magnitude better than pkdgrav2. GENGA runs up to 30 times faster than Mercury and up to 8 times faster than pkdgrav2. GENGA is written in CUDA C and runs on all NVIDIA GPUs with a computing capability of at least 2.0.

  15. A Multirate Variable-timestep Algorithm for N-body Solar System Simulations with Collisions

    NASA Astrophysics Data System (ADS)

    Sharp, P. W.; Newman, W. I.

    2016-03-01

    We present and analyze the performance of a new algorithm for performing accurate simulations of the solar system when collisions between massive bodies and test particles are permitted. The orbital motion of all bodies at all times is integrated using a high-order variable-timestep explicit Runge-Kutta Nyström (ERKN) method. The variation in the timestep ensures that the orbital motion of test particles on eccentric orbits or close to the Sun is calculated accurately. The test particles are divided into groups and each group is integrated using a different sequence of timesteps, giving a multirate algorithm. The ERKN method uses a high-order continuous approximation to the position and velocity when checking for collisions across a step. We give a summary of the extensive testing of our algorithm. In our largest simulation—that of the Sun, the planets Earth to Neptune and 100,000 test particles over 100 million years—the relative error in the energy after 100 million years was of the order of 10-11.

  16. Physicochemical properties and mineralization assessment of porous polymethylmethacrylate cement loaded with hydroxyapatite in simulated body fluid.

    PubMed

    Sa, Yue; Yang, Fang; de Wijn, Joost R; Wang, Yining; Wolke, Joop G C; Jansen, John A

    2016-04-01

    The aim of this study was to evaluate the effect of carboxymethylcellulose (CMC) as a pore generator and hydroxyapatite (HA) as an osteoconductive agent on the physicochemical properties and in-vitro mineralization ability of porous polymethylmethacrylate (PMMA) cement. To this end, various compositions of PMMA cements, which differed in amount of millimeter-sized hydroxyapatite (HA) particles and CMC hydrogel, were prepared and immersed into simulated body fluid (SBF) for 0, 7, 14, 21 and 28 days. It was demonstrated that the incorporation of CMC hydrogel decreased the maximum temperature of cement to the normal body temperature and prolonged the handling time during polymerization. Further, the amount of CMC was responsible for the creation of porosity and interconnectivity, which in turn determined the final mechanical properties of cements. The loaded HA particles enhanced the potential bioactivity of cement for bone ingrowth. Albeit different amount of HA particles influenced their final exposures on the surface of cured cement, all of the three amounts of HA did not weaken the final mechanical properties of cements. The data here suggests that the HA particle loaded porous PMMA cement can serve as the promising candidate for bone reconstruction.

  17. Evaluation of microwave landing system approaches in a wide-body transport simulator

    NASA Technical Reports Server (NTRS)

    Summers, L. G.; Feather, J. B.

    1992-01-01

    The objective of this study was to determine the suitability of flying complex curved approaches using the microwave landing system (MLS) with a wide-body transport aircraft. Fifty pilots in crews of two participated in the evaluation using a fixed-base simulator that emulated an MD-11 aircraft. Five approaches, consisting of one straight-in approach and four curved approaches, were flown by the pilots using a flight director. The test variables include the following: (1) manual and autothrottles; (2) wind direction; and (3) type of navigation display. The navigation display was either a map or a horizontal situation indicator (HSI). A complex wind that changed direction and speed with altitude, and included moderate turbulence, was used. Visibility conditions were Cat 1 or better. Subjective test data included pilot responses to questionnaires and pilot comments. Objective performance data included tracking accuracy, position error at decision height, and control activity. Results of the evaluation indicate that flying curved MLS approaches with a wide-body transport aircraft is operationally acceptable, depending upon the length of the final straight segment and the complexity of the approach.

  18. Tissue engineering of the small intestine by acellular collagen sponge scaffold grafting.

    PubMed

    Hori, Y; Nakamura, T; Matsumoto, K; Kurokawa, Y; Satomi, S; Shimizu, Y

    2001-01-01

    Tissue engineering of the small intestine will prove a great benefit to patients suffering from short bowel disease. However cell seeding in tissue engineering, such as fetal cell use, is accompanied by problems of ethical issues, rejection, and short supply. To overcome these problems, we carried out an experimental study on tissue engineering of the small intestine by acellular collagen sponge scaffold grafting. We resected the 5 cm long jejunum from beagle dogs and reconstructed it by acellular collagen sponge grafting with a silicon tube stent. The graft was covered with the omentum. At 1 month after operation, the silicon stent was removed endoscopically. Animals were sacrificed 1 and 4 months after operation, and were examined microscopically. Neo-intestinal regeneration was observed and the intestinal mucosa covered the luminal side of the regenerated intestine across the anastomosis. Thus, the small intestine was regenerated by tissue engineering technology using an acellular collagen sponge scaffold.

  19. Pertactin deficient Bordetella pertussis present a better fitness in mice immunized with an acellular pertussis vaccine.

    PubMed

    Hegerle, N; Dore, G; Guiso, N

    2014-11-20

    Bordetella pertussis is the etiologic agent of whooping cough and has been the target of vaccination for over fifty years. The latest strategies include the use of acellular pertussis vaccines that induce specific immunity against few virulence factors amongst which pertactin is included in three and five component acellular pertussis vaccines. Recently, it has been reported that B. pertussis clinical isolates loose the production of this adhesin in regions reaching high vaccine coverage with vaccines targeting this virulence factor. We here demonstrate that isolates not producing pertactin are capable of sustaining longer infection as compared to pertactin producing isolates in an in vivo model of acellular pertussis immunization. Loosing pertactin production might thus provide a selective advantage to these isolates in this background, which could account for the upraise in prevalence of these pertactin deficient isolates in the population.

  20. Acellular comet assay: a tool for assessing variables influencing the alkaline comet assay.

    PubMed

    Kennedy, Erin K; McNamee, James P; Prud'homme Lalonde, Louise; Jones, Trevor; Wilkinson, Diana

    2012-01-01

    In this study, an acellular modification to the alkaline comet assay to further evaluate key variables within the assay that may influence the outcome of genotoxicity studies is described. This acellular comet assay can detect differences of 0.2 Gy of (60)Co gamma-ray radiation between 0 and 1 Gy and differences of 1 Gy between 0 and 8 Gy; thus, this assay is applicable for a wide range of DNA damage levels. It is also shown that DNA damage from different radiation energies was not significantly different from (60)Co gamma-ray. This assay displayed a statistical increase in DNA damage due to uncontrolled exposure to natural light; however, the slope of the dose-response curve for light-exposed samples was similar to that for samples protected from light. A comparison of the alkaline comet assay with the acellular comet assay allowed for the intrinsic repair capacity of the alkaline comet assay to be quantified.

  1. The Formation of Asteroid Satellites: Numerical Simulations Using SPH and N-body Models

    NASA Astrophysics Data System (ADS)

    Durda, D. D.; Bottke, W. F.; Asphaug, E.; Richardson, D. C.

    2001-11-01

    The exciting discoveries of what is now a growing suite of asteroid satellites have renewed interest in the diversity of collisional mechanisms that may lead to the formation of small-body satellites and binary pairs. Understanding how asteroid satellites form is important because they hold important clues to the collisional environment of the asteroid population, and models of their formation may provide constraints on internal structures of asteroids beyond those possible from observations of satellite orbital properties alone. Since collisions are the dominant evolutionary process affecting asteroids, it is plausible that these satellites are by-products of cratering and/or catastrophic disruption events. Basic analytic arguments and preliminary numerical investigations have identified several collisional processes as plausible formation mechanisms; these include: (1) mutual capture following catastrophic disruption, (2) rotational fission due to glancing impact and spin-up, and (3) reaccretion in orbit of ejecta from large, non-catastrophic impacts. We will present initial results, focused on scenario (1), from a planned systematic investigation directed toward mapping out the parameter space of these three collisional mechanisms. Our work takes advantage of state-of-the-art numerical tools that have not been applied in previous asteroid satellite work. These include: (1) smooth-particle hydrodynamics (SPH) codes, which accurately model the pressures, temperatures, and energies of asteroid-asteroid impacts, and (2) efficient N-body codes which can track the trajectories of tens-of-thousands of individual collision fragments in an expedient manner. Simulations using SPH codes are used to model the various impact phases between colliding asteroids. Once the relevant portions of the impact phase are complete (crater formation/ejecta flow fields established with no further fragmentation/damage), the outcomes of the SPH models are handed off as the initial

  2. Simulation Study of Surface and Body Waves in a Magnetized Bounded Plasma.

    NASA Astrophysics Data System (ADS)

    Sultana, Dilruba

    The problem of wave propagation in a magnetized plasma slab has been studied by particle simulation of plasma. In our model, a warm homogeneous plasma slab is bounded by vacuum on two sides. Using a 2-D electrostatic particle code, we simulated two different cases. For the sharp boundary case with wave propagation perpendicular to the external field, two branches of surface waves are found to exist. A theoretical analysis showed that the discreteness of the modes is due to the quantization condition imposed by the boundary. A generalized surface mode which is damped in time appears below the second cyclotron harmonic and it is found that by specifying the complex frequency in the Bernstein wave dispersion relation, the wavelength and attenuation in the direction normal to the slab is predicted accurately. Short time scale phase mixing, damping and recurrence phenomena of Bernstein body modes are also observed. Oblique propagation of the waves are studied by the magnetic field perpendicular to the plasma -vacuum interface. For the free boundary model, the confinement is provided by fixed ion plus the magnetic field. Wave propagation was studied with and without an external magnetic field applied parallel to the slab boundaries. Among the interesting features observed in the case is a continuous spectrum with long wavelength parallel to the boundary (k _{y}lambda_{de} = 0). Transition layer effect is studied and compared with the rigid wall. The dispersion characteristics of the body wave spectrum remain unchanged. They also show the same type of initial phase mixing, damping and recurrence phenomena as for the sharp boundary. The surface wave spectrum shows remarkable differences. The cold plasma surface modes appear nearly at the same frequency. A very low frequency oscillation localized within the transition layer is also observed for all the two-dimensional modes. For the case of the unmagnetized plasma, only a discrete set of body waves appear above the plasma

  3. Large eddy simulation of forced ignition of an annular bluff-body burner

    SciTech Connect

    Subramanian, V.; Domingo, P.; Vervisch, L.

    2010-03-15

    The optimization of the ignition process is a crucial issue in the design of many combustion systems. Large eddy simulation (LES) of a conical shaped bluff-body turbulent nonpremixed burner has been performed to study the impact of spark location on ignition success. This burner was experimentally investigated by Ahmed et al. [Combust. Flame 151 (2007) 366-385]. The present work focuses on the case without swirl, for which detailed measurements are available. First, cold-flow measurements of velocities and mixture fractions are compared with their LES counterparts, to assess the prediction capabilities of simulations in terms of flow and turbulent mixing. Time histories of velocities and mixture fractions are recorded at selected spots, to probe the resolved probability density function (pdf) of flow variables, in an attempt to reproduce, from the knowledge of LES-resolved instantaneous flow conditions, the experimentally observed reasons for success or failure of spark ignition. A flammability map is also constructed from the resolved mixture fraction pdf and compared with its experimental counterpart. LES of forced ignition is then performed using flamelet fully detailed tabulated chemistry combined with presumed pdfs. Various scenarios of flame kernel development are analyzed and correlated with typical flow conditions observed in this burner. The correlations between, velocities and mixture fraction values at the sparking time and the success or failure of ignition, are then further discussed and analyzed. (author)

  4. An Integrated Simulation of a Wing-Body Combination for a Hovering Drosophila

    NASA Astrophysics Data System (ADS)

    Sahin, Mehmet; Dilek, Ezgi; Erzincanli, Belkis

    2015-11-01

    The parallel large-scale unstructured finite volume method based on an Arbitrary Lagrangian-Eulerian (ALE) formulation has been applied in order to investigate the near wake structure of a hovering Drosophila flight. DISTENE MeshGems-Hexa algorithm based on the octree method is used to generate the all hexahedral mesh for the wing-body combination. The mesh deformation algorithm is based on the indirect radial basis function (RBF) method at each time level while avoiding remeshing in order to enhance numerical robustness. The large-scale numerical simulations are carried out for a flapping Drosophila in hover flight. The λ2-criterion proposed by Jeong and Hussain (1995) is used for investigating the time variation of the Eulerian coherent structures in the near wake. In addition, the Lagrangian coherent structures is also investigated using finite-time Lyapunov exponents (FTLE) fields. The present simulations reveal highly detailed near wake topology for a hovering Drosophila. This is very useful in terms of understanding physics in biological flights which can provide a very useful tool for designing bio-inspired MAVs. The authors acknowledge financial support from Turkish National Scientific and Technical Research Council (TUBITAK) through project numbers 111M332 and 214M293.

  5. Fabrication of DNA/Hydroxyapatite nanocomposites by simulated body fluid for gene delivery

    SciTech Connect

    Takeshita, Takayuki; Okamoto, Masami

    2015-05-22

    The hydroxyapatite (HA) formation on the surface of DNA molecules in simulated body fluid (SBF) was examined. The osteoconductivity is estimated using SBF having ion concentrations approximately equal to those of human blood plasma. After immersion for 4 weeks in SBF at 36.5 °C, the HA crystallites possessing 1-14 micrometer in diameter grew on the surface of DNA molecules. The leaf flake-like and spherical shapes morphologies were observed through scanning electron microscopy analysis. Original peaks of both of DNA and HA were characterized by fourier transform infrared spectroscopy. The Ca/P ratio (1.1-1.5) in HA was estimated by energy dispersive X-ray analysis. After biomineralization, the calculated weight ratio of DNA/HA was 18/82 by thermogravimetry/differential thermal analysis. The molecular orbital computer simulation has been used to probe the interaction of DNA with two charge-balancing ions, CaOH{sup +} and CaH{sub 2}PO{sub 4}{sup +}. The adsorption enthalpy of the two ions on DNA having negative value was the evidence for the interface in mineralization of HA in SBF.

  6. Confrontation of top-hat spherical collapse against dark halos from cosmological N-body simulations

    NASA Astrophysics Data System (ADS)

    Suto, Daichi; Kitayama, Tetsu; Osato, Ken; Sasaki, Shin; Suto, Yasushi

    2016-02-01

    The top-hat spherical collapse model (TSC) is one of the most fundamental analytical frameworks to describe the non-linear growth of cosmic structure. TSC has motivated, and been widely applied in, various investigations even in the current era of precision cosmology. While numerous studies exist to examine its validity against numerical simulations in a statistical fashion, there are few analyses which compare the TSC dynamics in an individual object-wise basis, which is what we attempt in the present paper. We extract 100 halos at z = 0 from a cosmological N-body simulation according to the conventional TSC criterion for the spherical over-density. Then we trace back their spherical counterparts at earlier epochs. Just prior to the turn-around epoch of the halos, their dynamics are well approximated by TSC, but their turn-around epochs are systematically delayed and the virial radii are larger by ˜20% on average relative to the TSC predictions. We find that this systematic deviation can mainly be ascribed to the non-uniformity/inhomogeneity of dark matter density profiles and the non-zero velocity dispersions, both of which are neglected in TSC. In particular, the inside-out collapse and shell-crossing of dark matter halos play an important role in generating the significant velocity dispersion. The implications of the present result are briefly discussed.

  7. Preliminary subsonic aerodynamic model for simulation studies of the HL-20 lifting body

    NASA Technical Reports Server (NTRS)

    Jackson, E. Bruce; Cruz, Christopher I.

    1992-01-01

    A nonlinear, six-degree-of-freedom aerodynamic model for an early version of the HL-20 lifting body is described and compared with wind tunnel data upon which it is based. Polynomial functions describing most of the aerodynamic parameters are given and tables of these functions are presented. Techniques used to arrive at these functions are described. Basic aerodynamic coefficients were modeled as functions of angles of attack and sideslip. Vehicle lateral symmetry was assumed. Compressibility (Mach) effects were ignored. Control-surface effectiveness was assumed to vary linearly with angle of deflection and was assumed to be invariant with the angle of sideslip. Dynamic derivatives were obtained from predictive aerodynamic codes. Landing-gear and ground effects were scaled from Space Shuttle data. The model described is provided to support pilot-in-the-loop simulation studies of the HL-20. By providing the data in tabular format, the model is suitable for the data interpolation architecture of many existing engineering simulation facilities. Because of the preliminary nature of the data, however, this model is not recommended for study of the absolute performance of the HL-20.

  8. N-body simulations of the Carina dSph in MOND

    NASA Astrophysics Data System (ADS)

    Angus, G. W.; Gentile, G.; Diaferio, A.; Famaey, B.; van der Heyden, K. J.

    2014-05-01

    The classical dwarf spheroidals (dSphs) provide a critical test for Modified Newtonian Dynamics (MOND) because they are observable satellite galactic systems with low internal accelerations and low, but periodically varying, external acceleration. This varying external gravitational field is not commonly found acting on systems with low internal acceleration. Using Jeans modelling, Carina in particular has been demonstrated to require a V-band mass-to-light ratio greater than 5, which is the nominal upper limit for an ancient stellar population. We run MOND N-body simulations of a Carina-like dSph orbiting the Milky Way to test if dSphs in MOND are stable to tidal forces over the Hubble time and if those same tidal forces artificially inflate their velocity dispersions and therefore their apparent mass-to-light ratio. We run many simulations with various initial total masses for Carina and Galactocentric orbits (consistent with proper motions), and compare the simulation line-of-sight velocity dispersions (losVDs) with the observed losVDs of Walker et al. We find that the dSphs are stable, but that the tidal forces are not conducive to artificially inflating the losVDs. Furthermore, the range of mass-to-light ratios that best reproduces the observed losVDs of Carina is 5.3 to 5.7 and circular orbits are preferred to plunging orbits. Therefore, some tension still exists between the required mass-to-light ratio for the Carina dSph in MOND and those expected from stellar population synthesis models. It remains to be seen whether a careful treatment of the binary population or triaxiality might reduce this tension.

  9. A toy model to test the accuracy of cosmological N-body simulations

    NASA Astrophysics Data System (ADS)

    Sylos Labini, F.

    2013-04-01

    The evolution of an isolated over-density represents a useful toy model to test the accuracy of a cosmological N-body code in the non-linear regime as it is approximately equivalent to that of a truly isolated cloud of particles, with same density profile and velocity distribution, in a non-expanding background. This is the case as long as the system size is smaller than the simulation box side, so that its interaction with the infinite copies can be neglected. In such a situation, the over-density rapidly undergoes to a global collapse forming a quasi stationary state in virial equilibrium. However, by evolving the system with a cosmological code (GADGET) for a sufficiently long time, a clear deviation from such quasi-equilibrium configuration is observed. This occurs in a time tLI that depends on the values of the simulation numerical parameters such as the softening length and the time-stepping accuracy, i.e. it is a numerical artifact related to the limited spatial and temporal resolutions. The analysis of the Layzer-Irvine cosmic energy equation confirms that this deviation corresponds to an unphysical dynamical regime. By varying the numerical parameters of the simulation and the physical parameters of the system we show that the unphysical behaviour originates from badly integrated close scatterings of high-velocity particles. We find that, while the structure may remain virialized in the unphysical regime, its density and velocity profiles are modified with respect to the quasi-equilibrium configurations, converging, however, to well defined shapes, the former characterised by a Navarro Frenk White-type behaviour.

  10. High-Resolution N-Body Simulation of Lunar Accretion from an Impact-Generated Disk

    NASA Astrophysics Data System (ADS)

    Kokubo, E.; Ida, S.; Makino, J.

    1998-01-01

    We present the high-resolution N-body calculation of the lunar accretion from a circumterrestrial disk of debris generated by a giant impact on Earth. Our calculation is inspired by pioneering work, which was the first published N-body calculation of lunar accretion from an impact-generated disk. They modeled the disk by 1000 1500 particles, which were not enough to see the evolution of the spatial structure of the disk. By using the special-purpose computer for N-body problem HARP, we use 10,000 30,000 particles for the disk. The particle disk is modeled by the power-law surface density distribution and the power-law mass distribution. We use the 4th- order Hermite integrator for time integration. Mutual gravitational interactions among all particles are calculated by HARP. The normal and tangential components of the coefficient of restitution are 0.01-0.1 and 1, respectively. When two particles collide, we merge them if their rebound velocity is less than their surface escape velocity and the sum of their radii is smaller than 70% of their Hill radii, which corresponds to the fact that the two particles are outside their Roche limit. We also perform simulations without artificial accretion in which large bound particle aggregates are formed outside the Roche limit. The aggregates are often deformed or sometimes disrupted by Earth's tidal force. The results of our simulations suggest that the approximate treatment of accretion is generally valid. We follow the evolution of the disk for 1000 TK about 10 months, where TK is the Kepler period at the distance of the classical Roche limit. The typical outcome of the simulation is the formation of one large moon on a nearly circular orbit just outside the Roche limit. The result hardly depends on the initial condition of the disk as long as the disk is compact; in other words, most of the disk's mass exists inside the Roche limit. The evolution of f the dis is summarized as follows: (1) The disk shrinks through the

  11. [Pertussis vaccines: acellular versus whole cell. Perhaps a return to the past?].

    PubMed

    Cofré, José

    2015-10-01

    The resurgence of pertussis in the world and in our country has questioned the effectiveness of cellular and acellular vaccines. The reason why pertussis has not been controlled or eliminated after 70 years of implementation of the vaccination is probably multifactorial. This article, on the basis of questions and answers, describes the benefits and limitations of both cellular and acellular vaccines and suggests new strategies of vaccination in childhood. It is a fact that the currently applied vaccination does not eliminate the circulation of Bordetella pertussis in the community. Perhaps the introduction of vaccines with live B. pertussis, inhalation, will be able to eliminate the disease around the world. PMID:26633113

  12. Histochemical and morphological studies on a new type of acellular cartilage.

    PubMed

    Junqueira, L C; Toledo, O M; Montes, G S

    1983-01-01

    A new type of cartilage was found participating in a valve-like system inside the conus arteriosus of the fresh water sting ray, Potamotrygon sp.. This cartilage possesses no chondrocytes and its matrix is perforated by vascular channels that ramify dendritically forming canaliculi. The acellular cartilage does not possess perichondrium but, rather, it is attached to a basement membrane-like structure. The cartilaginous matrix contains collagen fibrils that strongly interact with the chondroitin sulfate of the ground substance. The histochemical and biochemical findings suggest that not all of the glycosaminoglycans present in the acellular cartilage are bound to protein cores to form proteoglycans. PMID:6407464

  13. Plastic Surgery and Acellular Dermal Matrix: Highlighting Trends from 1999 to 2013.

    PubMed

    Daar, David A; Gandy, Jessica R; Clark, Emily G; Mowlds, Donald S; Paydar, Keyianoosh Z; Wirth, Garrett A

    2016-05-01

    The last decade has ushered in a rapidly expanding global discussion regarding acellular dermal matrix (ADM) applications, economic analyses, technical considerations, benefits, and risks, with recent emphasis on ADM use in breast surgery. This study aims to evaluate global trends in ADM research using bibliometric analysis. The top nine Plastic Surgery journals were determined by impact factor (IF). Each issue of the nine journals between 1999 and 2013 was accessed to compile a database of articles discussing ADM. Publications were further classified by IF, authors' geographic location, study design, and level of evidence (LOE, I-V). Productivity index and productivity share were calculated for each region. In total, 256 ADM articles were accessed. The annual global publication volume increased significantly by 4.2 (0.87) articles per year (p<0.001), with a mean productivity index of 36.3 (59.0). The mean impact factor of the nine journals increased significantly from 0.61 (0.11) to 2.47 (0.99) from 1993 to 2013 (p<0.001). Despite this increase in the global ADM literature, the majority of research was of weaker LOE (level I: 2.29% and level II: 9.17%). USA contributed the most research (87%), followed by Asia (4.76%) and Western Europe (4.71%). USA contributed the greatest volume of research. Regarding clinical application of ADM, the majority of publications focused on ADM use in breast surgery, specifically breast reconstruction (154 articles, 60.2%). The majority of research was of lower LOE; thus, efforts should be made to strengthen the body of literature, particularly with regard to cost analysis.

  14. Plastic Surgery and Acellular Dermal Matrix: Highlighting Trends from 1999 to 2013.

    PubMed

    Daar, David A; Gandy, Jessica R; Clark, Emily G; Mowlds, Donald S; Paydar, Keyianoosh Z; Wirth, Garrett A

    2016-05-01

    The last decade has ushered in a rapidly expanding global discussion regarding acellular dermal matrix (ADM) applications, economic analyses, technical considerations, benefits, and risks, with recent emphasis on ADM use in breast surgery. This study aims to evaluate global trends in ADM research using bibliometric analysis. The top nine Plastic Surgery journals were determined by impact factor (IF). Each issue of the nine journals between 1999 and 2013 was accessed to compile a database of articles discussing ADM. Publications were further classified by IF, authors' geographic location, study design, and level of evidence (LOE, I-V). Productivity index and productivity share were calculated for each region. In total, 256 ADM articles were accessed. The annual global publication volume increased significantly by 4.2 (0.87) articles per year (p<0.001), with a mean productivity index of 36.3 (59.0). The mean impact factor of the nine journals increased significantly from 0.61 (0.11) to 2.47 (0.99) from 1993 to 2013 (p<0.001). Despite this increase in the global ADM literature, the majority of research was of weaker LOE (level I: 2.29% and level II: 9.17%). USA contributed the most research (87%), followed by Asia (4.76%) and Western Europe (4.71%). USA contributed the greatest volume of research. Regarding clinical application of ADM, the majority of publications focused on ADM use in breast surgery, specifically breast reconstruction (154 articles, 60.2%). The majority of research was of lower LOE; thus, efforts should be made to strengthen the body of literature, particularly with regard to cost analysis. PMID:27579264

  15. Plastic Surgery and Acellular Dermal Matrix: Highlighting Trends from 1999 to 2013

    PubMed Central

    Daar, David A; Gandy, Jessica R; Clark, Emily G; Mowlds, Donald S; Paydar, Keyianoosh Z; Wirth, Garrett A

    2016-01-01

    The last decade has ushered in a rapidly expanding global discussion regarding acellular dermal matrix (ADM) applications, economic analyses, technical considerations, benefits, and risks, with recent emphasis on ADM use in breast surgery. This study aims to evaluate global trends in ADM research using bibliometric analysis. The top nine Plastic Surgery journals were determined by impact factor (IF). Each issue of the nine journals between 1999 and 2013 was accessed to compile a database of articles discussing ADM. Publications were further classified by IF, authors’ geographic location, study design, and level of evidence (LOE, I-V). Productivity index and productivity share were calculated for each region. In total, 256 ADM articles were accessed. The annual global publication volume increased significantly by 4.2 (0.87) articles per year (p<0.001), with a mean productivity index of 36.3 (59.0). The mean impact factor of the nine journals increased significantly from 0.61 (0.11) to 2.47 (0.99) from 1993 to 2013 (p<0.001). Despite this increase in the global ADM literature, the majority of research was of weaker LOE (level I: 2.29% and level II: 9.17%). USA contributed the most research (87%), followed by Asia (4.76%) and Western Europe (4.71%). USA contributed the greatest volume of research. Regarding clinical application of ADM, the majority of publications focused on ADM use in breast surgery, specifically breast reconstruction (154 articles, 60.2%). The majority of research was of lower LOE; thus, efforts should be made to strengthen the body of literature, particularly with regard to cost analysis. PMID:27579264

  16. Characterization of 17-4 PH stainless steel foam for biomedical applications in simulated body fluid and artificial saliva environments.

    PubMed

    Mutlu, Ilven; Oktay, Enver

    2013-04-01

    Highly porous 17-4 PH stainless steel foam for biomedical applications was produced by space holder technique. Metal release and weight loss from 17-4 PH stainless steel foams was investigated in simulated body fluid and artificial saliva environments by static immersion tests. Inductively coupled plasma-mass spectrometer was employed to measure the concentrations of various metal ions released from the 17-4 PH stainless steel foams into simulated body fluids and artificial saliva. Effect of immersion time and pH value on metal release and weight loss in simulated body fluid and artificial saliva were determined. Pore morphology, pore size and mechanical properties of the 17-4 PH stainless steel foams were close to human cancellous bone.

  17. The dynamics of charged particles in the near wake of a very negatively charged body - Laboratory experiment and numerical simulation

    NASA Technical Reports Server (NTRS)

    Morgan, M. Alvin; Chan, Chung; Cooke, David L.; Tautz, Maurice F.

    1989-01-01

    A numerical simulation that is cylindrical in configuration space and three-dimensional in velocity space has been initiated to test a model for the near-wake dynamics of a very negatively charged body, with reference to the plasma environment around spacecraft. The simulation parameters were closely matched to those of a laboratory experiment so that the results can be compared directly. The laboratory study showed that the electrons and ions can display different temporal features in the filling-in of the wake; and that they can both be found within one body diameter of an object with a highly negative body potential. It was also found that the temperature of the electrons in the very near wake could be somewhat colder than the ambient value, suggesting the possibility of a filtering mechanism being operative there. The simulation results to date largely corroborate the density findings.

  18. The many-body Wigner Monte Carlo method for time-dependent ab-initio quantum simulations

    SciTech Connect

    Sellier, J.M. Dimov, I.

    2014-09-15

    The aim of ab-initio approaches is the simulation of many-body quantum systems from the first principles of quantum mechanics. These methods are traditionally based on the many-body Schrödinger equation which represents an incredible mathematical challenge. In this paper, we introduce the many-body Wigner Monte Carlo method in the context of distinguishable particles and in the absence of spin-dependent effects. Despite these restrictions, the method has several advantages. First of all, the Wigner formalism is intuitive, as it is based on the concept of a quasi-distribution function. Secondly, the Monte Carlo numerical approach allows scalability on parallel machines that is practically unachievable by means of other techniques based on finite difference or finite element methods. Finally, this method allows time-dependent ab-initio simulations of strongly correlated quantum systems. In order to validate our many-body Wigner Monte Carlo method, as a case study we simulate a relatively simple system consisting of two particles in several different situations. We first start from two non-interacting free Gaussian wave packets. We, then, proceed with the inclusion of an external potential barrier, and we conclude by simulating two entangled (i.e. correlated) particles. The results show how, in the case of negligible spin-dependent effects, the many-body Wigner Monte Carlo method provides an efficient and reliable tool to study the time-dependent evolution of quantum systems composed of distinguishable particles.

  19. High-order large-eddy simulation of flow over the ``Ahmed body'' car model

    NASA Astrophysics Data System (ADS)

    Minguez, M.; Pasquetti, R.; Serre, E.

    2008-09-01

    The structure of the turbulent flow over a simplified automotive model, the Ahmed body (S. R. Ahmed and G. Ramm, SAE Paper No. 8403001, 1984) with a 25° slanted back face, is investigated using high-order large-eddy simulations (LESs) at Reynolds number Re =768000. The numerical approach is carried out with a multidomain spectral Chebyshev-Fourier solver and the bluff body is modeled with a pseudopenalization method. The LES capability is implemented thanks to a spectral vanishing viscosity (SVV) technique, with particular attention to the near wall region. Such a SVV-LES approach is extended for the first time to an industrial three-dimensional turbulent flow over a complex geometry. In order to better understand the interactions between flow separations and the dynamic behavior of the released vortex wake, a detailed analysis of the flow structures is provided. The topology of the flow is well captured showing a partial separation of the boundary layer over the slanted face and the occurrence of two strong contrarotating trailing vortices expanding farther in the wake. The interactions of these large vortices with smaller structures reminiscent of horseshoe vortices, within the shear layer over the slanted face, form large helical structures providing strong unsteady phenomena in the wake. Mean velocity fields and turbulence statistics show a global agreement with the reference experiments of Lienhart et al. (DGLR Fach Symposium der AG SRAB, Stuttgart University, 15-17 November 2000). In order to provide a deeper insight into the nature of turbulence, the flow is analyzed using power spectra and the invariant theory of turbulence of Lumley [Adv. Appl. Mech. 18, 123 (1978)].

  20. FLY. A parallel tree N-body code for cosmological simulations

    NASA Astrophysics Data System (ADS)

    Antonuccio-Delogu, V.; Becciani, U.; Ferro, D.

    2003-10-01

    FLY is a parallel treecode which makes heavy use of the one-sided communication paradigm to handle the management of the tree structure. In its public version the code implements the equations for cosmological evolution, and can be run for different cosmological models. This reference guide describes the actual implementation of the algorithms of the public version of FLY, and suggests how to modify them to implement other types of equations (for instance, the Newtonian ones). Program summary Title of program: FLY Catalogue identifier: ADSC Program summary URL: http://cpc.cs.qub.ac.uk/summaries/ADSC Program obtainable from: CPC Program Library, Queen's University of Belfast, N. Ireland Computer for which the program is designed and others on which it has been tested: Cray T3E, Sgi Origin 3000, IBM SP Operating systems or monitors under which the program has been tested: Unicos 2.0.5.40, Irix 6.5.14, Aix 4.3.3 Programming language used: Fortran 90, C Memory required to execute with typical data: about 100 Mwords with 2 million-particles Number of bits in a word: 32 Number of processors used: parallel program. The user can select the number of processors >=1 Has the code been vectorized or parallelized?: parallelized Number of bytes in distributed program, including test data, etc.: 4615604 Distribution format: tar gzip file Keywords: Parallel tree N-body code for cosmological simulations Nature of physical problem: FLY is a parallel collisionless N-body code for the calculation of the gravitational force. Method of solution: It is based on the hierarchical oct-tree domain decomposition introduced by Barnes and Hut (1986). Restrictions on the complexity of the program: The program uses the leapfrog integrator schema, but could be changed by the user. Typical running time: 50 seconds for each time-step, running a 2-million-particles simulation on an Sgi Origin 3800 system with 8 processors having 512 Mbytes RAM for each processor. Unusual features of the program: FLY

  1. Constraints on dark matter particles from theory, galaxy observations, and N-body simulations

    SciTech Connect

    Boyanovsky, D.; Vega, H. J. de; Sanchez, N. G.

    2008-02-15

    Mass bounds on dark matter (DM) candidates are obtained for particles that decouple in or out of equilibrium while ultrarelativistic with arbitrary isotropic and homogeneous distribution functions. A coarse grained Liouville invariant primordial phase-space density D is introduced which depends solely on the distribution function at decoupling. The density D is explicitly computed and combined with recent photometric and kinematic data on dwarf spheroidal satellite galaxies in the Milky Way (dShps) and the observed DM density today yielding upper and lower bounds on the mass, primordial phase-space densities, and velocity dispersion of the DM candidates. Combining these constraints with recent results from N-body simulations yields estimates for the mass of the DM particles in the range of a few keV. We establish in this way a direct connection between the microphysics of decoupling in or out of equilibrium and the constraints that the particles must fulfill to be suitable DM candidates. If chemical freeze-out occurs before thermal decoupling, light bosonic particles can Bose condense. We study such Bose-Einstein condensate (BEC) as a dark matter candidate. It is shown that, depending on the relation between the critical (T{sub c}) and decoupling (T{sub d}) temperatures, a BEC light relic could act as cold DM but the decoupling scale must be higher than the electroweak scale. The condensate hastens the onset of the nonrelativistic regime and tightens the upper bound on the particle's mass. A nonequilibrium scenario which describes particle production and partial thermalization, sterile neutrinos produced out of equilibrium, and other DM models is analyzed in detail and the respective bounds on mass, primordial phase-space density, and velocity dispersion are obtained. Thermal relics with m{approx}few keV that decouple when ultrarelativistic and sterile neutrinos produced resonantly or nonresonantly lead to a primordial phase-space density compatible with cored d

  2. Singularity free N-body simulations called 'Dynamic Universe Model' don't require dark matter

    NASA Astrophysics Data System (ADS)

    Naga Parameswara Gupta, Satyavarapu

    For finding trajectories of Pioneer satellite (Anomaly), New Horizons satellite going to Pluto, the Calculations of Dynamic Universe model can be successfully applied. No dark matter is assumed within solar system radius. The effect on the masses around SUN shows as though there is extra gravitation pull toward SUN. It solves the Dynamics of Extra-solar planets like Planet X, satellite like Pioneer and NH for 3-Position, 3-velocity 3-accelaration for their masses, considering the complex situation of Multiple planets, Stars, Galaxy parts and Galaxy centre and other Galaxies Using simple Newtonian Physics. It already solved problems Missing mass in Galaxies observed by galaxy circular velocity curves successfully. Singularity free Newtonian N-body simulations Historically, King Oscar II of Sweden an-nounced a prize to a solution of N-body problem with advice given by Güsta Mittag-Leffler in 1887. He announced `Given a system of arbitrarily many mass points that attract each according to Newton's law, under the assumption that no two points ever collide, try to find a representation of the coordinates of each point as a series in a variable that is some known function of time and for all of whose values the series converges uniformly.'[This is taken from Wikipedia]. The announced dead line that time was1st June 1888. And after that dead line, on 21st January 1889, Great mathematician Poincaré claimed that prize. Later he himself sent a telegram to journal Acta Mathematica to stop printing the special issue after finding the error in his solution. Yet for such a man of science reputation is important than money. [ Ref Book `Celestial mechanics: the waltz of the planets' By Alessandra Celletti, Ettore Perozzi, page 27]. He realized that he has been wrong in his general stability result! But till now nobody could solve that problem or claimed that prize. Later all solutions resulted in singularities and collisions of masses, given by many people

  3. Immunogenicity and safety of a monovalent, multicomponent acellular pertussis vaccine in 15 month-6-year-old German children. Monovalent Acellular Pertussis Vaccine Study Group.

    PubMed

    Stehr, K; Heininger, U; Uhlenbusch, R; Angersbach, P; Hackell, J; Eckhardt, T

    1995-03-01

    Immunization against pertussis has been re-recommended for healthy children in Germany in 1991. In addition the former restriction of immunizing only in the first 2 years of life was abolished. In children born before 1991 immunization rates against pertussis were 15% or less. With the new recommendations physicians are now faced with an increasing demand of parents for catch-up vaccinations in these children. Since they were immunized against diphtheria and tetanus previously monovalent pertussis vaccines are needed for this indication. Therefore a monovalent, multicomponent acellular pertussis vaccine was studied in 249 German children 15 months to 6 years of age. Three doses were administered at 6-10 week intervals. Reactogenicity and antibody responses against the vaccine antigens pertussis toxin (PT), filamentous haemagglutinin (FHA), 69-kd antigen (pertactin) and fimbriae-2 (agglutinogen) were investigated. Local and systemic reactions were minimal in frequency and severity. Antibody responses against all vaccine antigens were pronounced with 93%-100% of vaccinees demonstrating at least four fold titre rises above pre-immunization after the third dose. These findings indicate that this monovalent, multicomponent acellular pertussis vaccine with excellent immunogenicity and low reactogenicity is an appropriate candidate for closing immunization gaps in older children in countries with previously low vaccination rates against pertussis. Based on the results of this study the monovalent acellular pertussis vaccine was licensed in Germany in January 1994. PMID:7758519

  4. Simulations of dusty plasmas using a special-purpose computer system designed for gravitational N-body problems

    SciTech Connect

    Yamamoto, K.; Mizuno, Y.; Hibino, S.; Inuzuka, H.; Cao, Y.; Liu, Y.; Yazawa, K.

    2006-01-15

    Simulations of dusty plasmas were performed using GRAPE-6, a special-purpose computer designed for gravitational N-body problems. The collective behavior of dust particles, which are injected into the plasma, was studied by means of three-dimensional computer simulations. As an example of a dusty plasma simulation, experiments on Coulomb crystals in plasmas are simulated. Formation of a quasi-two-dimensional Coulomb crystal has been observed under typical laboratory conditions. Another example was to simulate movement of dust particles in plasmas under microgravity conditions. Fully three-dimensional spherical structures of dust clouds have been observed. For the simulation of a dusty plasma in microgravity with 3x10{sup 4} particles, GRAPE-6 can perform the whole operation 1000 times faster than by using a Pentium 4 1.6 GHz processor.

  5. Unsteady Euler/Lagrange simulation of a confined bluff-body gas-solid turbulent flow

    NASA Astrophysics Data System (ADS)

    Chrigui, Mouldi; Hidouri, Ammar; Sadiki, Amsini; Janicka, Johannes

    2013-10-01

    An unsteady Euler-Lagrangian approach is adopted to predict the gaseous carrier and disperse phases flow dynamics. The turbulence is captured using two different methods, i.e. the unsteady Reynolds averaging based numerical simulation (URANS) and the large eddy simulation (LES). In the latter one, the dynamic Smagorinsky approach is used to model the sub-grid scale stresses. The time-dependent solid particle and gas phase flow properties of a confined bluff-body turbulent flow including two-way coupling effects are evaluated through comparisons with experimental data. The configuration under study features an important recirculation zone and has a mass loading of 22%. So, collision effects are not considered while tracking the disperse phase that consists of glass beads. A thermodynamically consistent turbulence modulation approach is applied for the determination of the source terms that account for the effect of particles on the turbulence level of the carrier phase. Within the URANS technique the dispersion of particles is captured by the Markov sequence approach; this model is modified by integrating a drift factor term while modeling the pressure gradient. A particular emphasis is put on the disperse phase feedback on the carrier phase and coupling procedure within each Eulerian time step along with an unsteady coupling of both codes, the (Eulerian) FASTEST3D and the (Lagrangian) LAG3D codes. Quantitative results of the disperse phase properties as well as those of the carrier phase are presented at different positions around the recirculation zone. The numerical results using both, the LES and/or the URANS delivered comparable results that agree reasonably with experimental data. However, a slight advantage of LES over URANS could be observed.

  6. Navier-Stokes Simulation of the Canard-Wing-Body Longitudinal Dynamic Stability Characteristics

    NASA Technical Reports Server (NTRS)

    Tu, Eugene L.; VanDalsem, William R. (Technical Monitor)

    1996-01-01

    Many modern aircraft are canard-configured for aircraft control and improved aerodynamic performance. Canards can often enhance aircraft cruise performance, maneuverability and agility. For close-coupled canard configurations, the aerodynamic interaction between the canard and wing significantly changes the flow characteristics of the wing. In unsteady flow, such changes in the flow structure and performance of wings can be quite pronounced. Accurate modeling of the unsteady aerodynamics is essential for potential CFD design and analysis of such configurations. A time-accurate numerical simulation is performed to study the unsteady aerodynamic interaction between a canard and wing with emphasis on the effects of the canard on the configuration's dynamic response characteristics. The thin-layer Reynolds-averaged Navier-Stokes Equations with various turbulence models are used in this study. Computations are made on a generic, analytically-defined, close-coupled canard-wing-body configuration which has been the subject of numerous previously published experimental studies during the 1970's to mid-80's. More recently, a series of steady-flow simulations has been performed and published by the author. In the current study, the configuration is given prescribed ramp and oscillatory motions in order to predict characteristics such as the damping-in-pitch and oscillatory longitudinal stability parameters. The current computations are made at high-subsonic and transonic Mach numbers, moderate angles-of- attack from -4 to 20 degrees, and at various pitch rates and reduced frequencies. Comparisons of pressures and integrated force quantities (e.g. lift, drag, pitching moment and selected dynamic parameters) are made with other published computational results and available experimental data. Results showing the unsteady effects of the canard on surface pressures, integrated forces, canard-wing vortex interaction and vortex breakdown will be presented.

  7. Impact disruption of gravity-dominated bodies: New simulation data and scaling

    NASA Astrophysics Data System (ADS)

    Movshovitz, N.; Nimmo, F.; Korycansky, D. G.; Asphaug, E.; Owen, J. M.

    2016-09-01

    We present results from a suite of 169 hydrocode simulations of collisions between planetary bodies with radii from 100 to 1000 km. The simulation data are used to derive a simple scaling law for the threshold for catastrophic disruption, defined as a collision that leads to half the total colliding mass escaping the system post impact. For a target radius 100 ≤ RT ≤ 1000km and a mass MT and a projectile radius rp ≤ RT and mass mp we find that a head-on impact with velocity magnitude v is catastrophic if the kinetic energy of the system in the center of mass frame, K = 0.5MTmpv2 /(MT +mp) , exceeds a threshold value K* that is a few times U =(3 / 5) G MT2/RT +(3 / 5) G mp2 /rp + GMTmp /(RT +rp) , the gravitational binding energy of the system at the moment of impact; G is the gravitational constant. In all head-on collision runs we find K* =(5.5 ± 2.9) U . Oblique impacts are catastrophic when the fraction of kinetic energy contained in the volume of the projectile intersecting the target during impact exceeds ∼2 K* for 30° impacts and ∼3.5 K* for 45° impacts. We compare predictions made with this scaling to those made with existing scaling laws in the literature extrapolated from numerical studies on smaller targets. We find significant divergence between predictions where in general our results suggest a lower threshold for disruption except for highly oblique impacts with rp ≪ RT. This has implications for the efficiency of collisional grinding in the asteroid belt (Morbidelli et al., [2009] Icarus, 204, 558-573), Kuiper belt (Greenstreet et al., [2015] Icarus, 258, 267-288), and early Solar System accretion (Chambers [2013], Icarus, 224, 43-56).

  8. N-body simulations of planet formation: understanding exoplanet system architectures

    NASA Astrophysics Data System (ADS)

    Coleman, Gavin; Nelson, Richard

    2015-12-01

    Observations have demonstrated the existence of a significant population of compact systems comprised of super-Earths and Neptune-mass planets, and a population of gas giants that appear to occur primarily in either short-period (<10 days) or longer period (>100 days) orbits. The broad diversity of system architectures raises the question of whether or not the same formation processes operating in standard disc models can explain these planets, or if different scenarios are required instead to explain the widely differing architectures. To explore this issue, we present the results from a comprehensive suite of N-body simulations of planetary system formation that include the following physical processes: gravitational interactions and collisions between planetary embryos and planetesimals; type I and II migration; gas accretion onto planetary cores; self-consistent viscous disc evolution and disc removal through photo-evaporation. Our results indicate that the formation and survival of compact systems of super-Earths and Neptune-mass planets occur commonly in disc models where a simple prescription for the disc viscosity is assumed, but such models never lead to the formation and survival of gas giant planets due to migration into the star. Inspired in part by the ALMA observations of HL Tau, and by MHD simulations that display the formation of long-lived zonal flows, we have explored the consequences of assuming that the disc viscosity varies in both time and space. We find that the radial structuring of the disc leads to conditions in which systems of giant planets are able to form and survive. Furthermore, these giants generally occupy those regions of the mass-period diagram that are densely populated by the observed gas giants, suggesting that the planet traps generated by radial structuring of protoplanetary discs may be a necessary ingredient for forming giant planets.

  9. Study of Nickel Ion Release in Simulated Body Fluid from C+-IMPLANTED Nickel Titanium Alloy

    NASA Astrophysics Data System (ADS)

    Shafique, Muhammad Ahsan; Murtaza, G.; Saadat, Shahzad; Zaheer, Zeeshan; Shahnawaz, Muhammad; Uddin, Muhammad K. H.; Ahmad, Riaz

    2016-05-01

    Nickel ion release from NiTi shape memory alloy is an issue for biomedical applications. This study was planned to study the effect of C+ implantation on nickel ion release and affinity of calcium phosphate precipitation on NiTi alloy. Four annealed samples are chosen for the present study; three samples with oxidation layer and the fourth without oxidation layer. X-ray diffraction (XRD) spectra reveal amorphization with ion implantation. Proton-induced X-ray emission (PIXE) result shows insignificant increase in Ni release in simulated body fluid (SBF) and calcium phosphate precipitation up to 8×1013ions/cm2. Then Nickel contents show a sharp increase for greater ion doses. Corrosion potential decreases by increasing the dose but all the samples passivate after the same interval of time and at the same level of VSCE in ringer lactate solution. Hardness of samples initially increases at greater rate (up to 8×1013ions/cm2) and then increases with lesser rate. It is found that 8×1013ions/cm2 (≈1014) is a safer limit of implantation on NiTi alloy, this limit gives us lesser ion release, better hardness and reasonable hydroxyapatite incubation affinity.

  10. Corrosion fatigue behavior of a biocompatible ultrafine-grained niobium alloy in simulated body fluid.

    PubMed

    Rubitschek, F; Niendorf, T; Karaman, I; Maier, H J

    2012-01-01

    The present study reports on the corrosion fatigue behavior of ultrafine-grained (UFG) Niobium 2 wt-% Zirconium (NbZr) alloy in simulated body fluid (SBF). The alloy was processed using multipass equal channel angular processing at room temperature, resulting in a favorable combination of high strength and ductility along with superior biocompatibility and excellent corrosion resistance. Electrochemical measurements revealed stable passive behavior in SBF saline solutions, similar to conventional Ti-6Al-4V alloy. High-cycle fatigue tests showed no alteration in the crack initiation behavior due to the SBF environment, and an absence of pitting and corrosion products. More severe test conditions were obtained in the fatigue crack growth experiments in saline environments. Crack growth rates in UFG NbZr were marginally increased in SBF as compared to laboratory air at a constant test frequency of 20 Hz. Upon a 100 fold decrease in the test frequency, slightly higher crack growth rates were observed only in the near-threshold region. Such excellent corrosion and corrosion fatigue properties of UFG NbZr recommend it as an attractive new material for biomedical implants.

  11. Numerical Simulation of High Intensity Focused Ultrasound Therapy with Volume Model of Human Body

    NASA Astrophysics Data System (ADS)

    Okita, Kohei; Sugiyama, Kazuyasu; Ono, Kenji; Takagi, Shu; Matsumoto, Yoichiro

    2010-03-01

    The development of the HIFU therapy for the deeply placed cancer has been desired. On problem is the displacement of the focal point due to the inhomogeneity of human body. The objectives are to realize the appropriate phase control of an array transducer and to support the preoperative planning of HIFU therapy by the computational prediction of treatment regions. Our approach is to solve the mass and momentum equations for mixture with the equation of state of media. The heat equation with a heat source of a viscous dissipation is solved to estimate the ablation region of tissue. The ablation, i.e., the heat denaturation of protein, is modeled as a phase transition by the phase field model. The HIFU therapy with a bowl-shape array transducer for a liver cancer is simulated. As the result with a phase control, we obtain a clear focus which is closer to a target point than the focus without a phase control, when the ultrasound propagates through lib bones. In addition, the development of the ablation region is reproduced numerically.

  12. Surface Behavior of Bioactive Glass of Si-Na-Ca-P System in Simulated Body Fluid

    NASA Astrophysics Data System (ADS)

    Ma, Jie; Chen, Chuanzhong; Wang, Diangang; Dang, Xing; Bao, Ruiliang; Yao, Liang

    Glass of the Si-Na-Ca-P system has been synthesized by normal melting and annealing technique. The obtained glass powders and annealed blocks were showed to be amorphous by X-ray diffraction (XRD). The thermal properties of glasses were analyzed by differential scanning calorimetry (DSC), it showed that the glass transformation temperature (Tg) was 556.3°C. The behavior of annealed glass discs in simulated body fluid solution (SBF) was studied in polyethylene containers at a constant temperature of 37°C for different time up to 14 days. The changes in the surface morphology and composition were observed by electronic probe microanalyzer (EPMA) associated with energy dispersive spectroscopy (EDS). Glass surface changed quickly as soon as immersion took place, and after longer soaking time, it showed different superimposed internal and external layers, which were identified as SiO2-rich and CaO-P2O5-rich layers, and on the external layer, spherical particles were also discovered.

  13. Dependence of ion concentration in simulated body fluid on apatite precipitation on titania surface

    NASA Astrophysics Data System (ADS)

    Sakaguchi, Akira; Nakano, Masayuki; Hieda, Junko; Ohtake, Naoto; Akasaka, Hiroki

    2015-08-01

    Titanium and its alloys are used as biomaterials, because of their high biocompatibility. Apatite precipitates on a titania surface in vivo, and living bone and titanium alloy are coupled through the thin apatite layer. The initial precipitation behavior of apatite on titania in simulated body fluid (SBF) solutions was evaluated and the effect of inorganic ions in the SBF was investigated. Measurement using the SPR phenomenon was used to evaluate the initial apatite precipitation. An SBF containing approximately equal ion concentrations to those in blood plasma was added to a titania surface and the SPR profile was obtained, from which the initial apatite precipitation rate was found to be 1.14 nm/h. Furthermore, the relationship between the inorganic concentration and the precipitation rate was determined for SBFs with different Na+ and Ca2+ concentrations. Apatite precipitation did not occur in the SBF with a low Na+ concentration, whereas the initial apatite precipitation rate in the SBF that did not contain Ca2+ was 0.32 nm/h. According to these results, Ca2+ has little effect on the initial apatite precipitation. In the initial reaction of apatite precipitation, sodium titanate is formed by the absorption of Na+. Next, calcium titanate precipitates upon the substitution of Na+ with Ca2+. Finally, Na+, phosphate ions and hydroxyl ions are attracted to the surface and apatite is formed. Thus, the rate-limiting factor in the initial nucleation of apatite is the Na+ concentration.

  14. Tribological behavior study on Ti-Nb-Sn/hydroxyapatite composites in simulated body fluid solution.

    PubMed

    Chen, Yuyong; Wang, Xiaopeng; Xu, Lijuan; Liu, Zhiguang; Kee, Do Woo

    2012-06-01

    In this study, Ti-35Nb-2.5Sn/xhydroxyapatite (HA) composites were sintered by pulse current activated sintering (PCAS) from powders milled for different time. These sintered composites were expected to be potential biomaterials. Ca(3)(PO(4))(2) phase which could increase hardness of sintered composites was found in the Ti-35Nb-2.5Sn/15HA composite sintered from 12 h milled powders. The sintered composites had low elastic modulus (18∼26 GPa) and high compression strength. Due to the importance of friction and wear in biomaterials application, the tribological behavior of sintered composites was studied in simulated body fluid (SBF) solution. Results revealed that milling time and HA content of powders could affect wear properties of sintered composites. The major wear mechanism was abrasive wear in the wear test. The wear rate and friction coefficient decreased when milling time and HA content of powders increased. The lowest friction coefficient (0.1223) was obtained in the Ti-35Nb-2.5Sn/15HA composite sintered from 12 h milled powders, and this composite had superior wear resistance. PMID:22520422

  15. Many-body dissipative particle dynamics simulation of liquid/vapor and liquid/solid interactions

    SciTech Connect

    Arienti, Marco; Pan, Wenxiao; Li, Xiaoyi; Karniadakis, George E.

    2011-05-27

    The combination of short-range repulsive and long-range attractive forces in Many-body Dissipative Particle Dynamics (MDPD) is examined at a vapor/liquid and liquid/solid interface. Based on the radial distribution of the virial pressure in a drop at equilibrium, a systematic study is carried out to characterize the sensitivity of the surface tension coefficient with respect to the inter-particle interaction parameters. For the first time, this study highlights the approximately cubic dependence of the surface tension coefficient on the bulk density of the fluid. In capillary flow, MDPD solutions are shown to satisfy the condition on the wavelength of an axial disturbance leading to the pinch-off of a cylindrical liquid thread. Correctly, no pinch-off occurs below the cutoff wavelength. MDPD is augmented by a set of bell-shaped weight functions to model interaction with a solid wall. There, hydrophilic and hydrophobic behaviors, including the occurrence of slip in the latter, are reproduced using a modification in the weight function that avoids particle clustering. Finally, the dynamics of droplets entering an inverted Y-shaped fracture junction is correctly captured in simulations parameterized by the Bond number, proving the flexibility of MDPD in modeling interface-dominated flows.

  16. Many-body dissipative particle dynamics simulation of liquid/vapor and liquid/solid interactions

    NASA Astrophysics Data System (ADS)

    Arienti, Marco; Pan, Wenxiao; Li, Xiaoyi; Karniadakis, George

    2011-05-01

    The combination of short-range repulsive and long-range attractive forces in many-body dissipative particle dynamics (MDPD) is examined at a vapor/liquid and liquid/solid interface. Based on the radial distribution of the virial pressure in a drop at equilibrium, a systematic study is carried out to characterize the sensitivity of the surface tension coefficient with respect to the inter-particle interaction parameters. For the first time, the approximately cubic dependence of the surface tension coefficient on the bulk density of the fluid is evidenced. In capillary flow, MDPD solutions are shown to satisfy the condition on the wavelength of an axial disturbance leading to the pinch-off of a cylindrical liquid thread; correctly, no pinch-off occurs below the cutoff wavelength. Moreover, in an example that illustrates the cascade of fluid dynamics behaviors from potential to inertial-viscous to stochastic flow, the dynamics of the jet radius is consistent with the power law predictions of asymptotic analysis. To model interaction with a solid wall, MDPD is augmented by a set of bell-shaped weight functions; hydrophilic and hydrophobic behaviors, including the occurrence of slip in the latter, are reproduced using a modification in the weight function that avoids particle clustering. The dynamics of droplets entering an inverted Y-shaped fracture junction is shown to be correctly captured in simulations parametrized by the Bond number, confirming the flexibility of MDPD in modeling interface-dominated flows.

  17. N-body simulations with a cosmic vector for dark energy

    NASA Astrophysics Data System (ADS)

    Carlesi, Edoardo; Knebe, Alexander; Yepes, Gustavo; Gottlöber, Stefan; Jiménez, Jose Beltrán.; Maroto, Antonio L.

    2012-07-01

    We present the results of a series of cosmological N-body simulations of a vector dark energy (VDE) model, performed using a suitably modified version of the publicly available GADGET-2 code. The set-ups of our simulations were calibrated pursuing a twofold aim: (1) to analyse the large-scale distribution of massive objects and (2) to determine the properties of halo structure in this different framework. We observe that structure formation is enhanced in VDE, since the mass function at high redshift is boosted up to a factor of 10 with respect to Λ cold dark matter (ΛCDM), possibly alleviating tensions with the observations of massive clusters at high redshifts and early reionization epoch. Significant differences can also be found for the value of the growth factor, which in VDE shows a completely different behaviour, and in the distribution of voids, which in this cosmology are on average smaller and less abundant. We further studied the structure of dark matter haloes more massive than 5 × 1013 h-1 M⊙, finding that no substantial difference emerges when comparing spin parameter, shape, triaxiality and profiles of structures evolved under different cosmological pictures. Nevertheless, minor differences can be found in the concentration-mass relation and the two-point correlation function, both showing different amplitudes and steeper slopes. Using an additional series of simulations of a ΛCDM scenario with the same ? and σ8 used in the VDE cosmology, we have been able to establish whether the modifications induced in the new cosmological picture were due to the particular nature of the dynamical dark energy or a straightforward consequence of the cosmological parameters. On large scales, the dynamical effects of the cosmic vector field can be seen in the peculiar evolution of the cluster number density function with redshift, in the shape of the mass function, in the distribution of voids and on the characteristic form of the growth index γ(z). On

  18. Repair of a Gingival Fenestration Using an Acellular Dermal Matrix Allograft.

    PubMed

    Breault, Lawrence G; Brentson, Raquel C; Fowler, Edward B; Bisch, Frederick C

    2016-01-01

    A case report illustrating the successful treatment of a gingival fenestration with an acellular dermal matrix (ADM) allograft. After 2½ months of healing, the ADM was completely integrated into the soft tissues of the mandibular anterior gingiva with complete resolution of the gingival fenestration, resulting in excellent gingival esthetics. PMID:26874103

  19. One-stage human acellular nerve allograft reconstruction for digital nerve defects

    PubMed Central

    Li, Xue-yuan; Hu, Hao-liang; Fei, Jian-rong; Wang, Xin; Wang, Tian-bing; Zhang, Pei-xun; Chen, Hong

    2015-01-01

    Human acellular nerve allografts have a wide range of donor origin and can effectively avoid nerve injury in the donor area. Very little is known about one-stage reconstruction of digital nerve defects. The present study observed the feasibility and effectiveness of human acellular nerve allograft in the reconstruction of < 5-cm digital nerve defects within 6 hours after injury. A total of 15 cases of nerve injury, combined with nerve defects in 18 digits from the Department of Emergency were enrolled in this study. After debridement, digital nerves were reconstructed using human acellular nerve allografts. The patients were followed up for 6–24 months after reconstruction. Mackinnon-Dellon static two-point discrimination results showed excellent and good rates of 89%. Semmes-Weinstein monofilament test demonstrated that light touch was normal, with an obvious improvement rate of 78%. These findings confirmed that human acellular nerve allograft for one-stage reconstruction of digital nerve defect after hand injury is feasible, which provides a novel trend for peripheral nerve reconstruction. PMID:25788927

  20. Computer Simulation and Analysis on Flow Characteristics and Distribution Patterns of Polymethylmethacrylate in Lumbar Vertebral Body and Vertebral Pedicle

    PubMed Central

    Liu, Da; Liu, Xu-li; Zhang, Bo; Liao, Dong-fa; Li, Zhi-qiang; Zhou, Jiang-jun; Kang, Xia; Zheng, Wei; Lei, Wei

    2015-01-01

    This study was designed to analyze the flow and distribution of polymethylmethacrylate (PMMA) in vertebral body through computer simulation. Cadaveric lumbar vertebrae were scanned through electron beam tomography (EBT). The data was imported into Mimics software to build computational model. Vertebral body center and junction of pedicle and vertebral body were chosen as injection points. Silicone oil with viscosity of 100,000 cSt matching with PMMA bone cement was chosen for injection. The flow and distribution of silicone oil were analyzed using Fluent software. In vertebral body, silicone oil formed a circle-like shape centered by injection point on transverse and longitudinal sections, finally forming a sphere-like shape as a whole. Silicone oil diffused along lateral and posterior walls forming a circle-like shape on transverse section centered by injection point in pedicle, eventually forming a sphere-like shape as a whole. This study demonstrated that silicone oil flowed and diffused into a circle-like shape centered by injection point and finally formed a sphere-like shape as a whole in both vertebral body and pedicle. The flow and distribution of silicon oil in computational model could simulate PMMA distribution in vertebral body. It may provide theoretical evidence to reduce PMMA leakage risk during percutaneous vertebroplasty. PMID:26770969

  1. Numerical simulation of the wake variation due to the change of after-body configurations

    NASA Astrophysics Data System (ADS)

    Aoki, Kiyohira; Zhu, Ming

    1993-09-01

    Wake variation due to the difference of the after body configuration is numerically studied for the notch-back car-like body by using the finite volume method. The relationship between the wake and the drag is also investigated. Calculated results denote that the intensity of the longitudinal vortices has close relation with the pressure drag of the after-body.

  2. Acellular ostrich corneal stroma used as scaffold for construction of tissue-engineered cornea

    PubMed Central

    Liu, Xian-Ning; Zhu, Xiu-Ping; Wu, Jie; Wu, Zheng-Jie; Yin, Yong; Xiao, Xiang-Hua; Su, Xin; Kong, Bin; Pan, Shi-Yin; Yang, Hua; Cheng, Yan; An, Na; Mi, Sheng-Li

    2016-01-01

    AIM To assess acellular ostrich corneal matrix used as a scaffold to reconstruct a damaged cornea. METHODS A hypertonic saline solution combined with a digestion method was used to decellularize the ostrich cornea. The microstructure of the acellular corneal matrix was observed by transmission electron microscopy (TEM) and hematoxylin and eosin (H&E) staining. The mechanical properties were detected by a rheometer and a tension machine. The acellular corneal matrix was also transplanted into a rabbit cornea and cytokeratin 3 was used to check the immune phenotype. RESULTS The microstructure and mechanical properties of the ostrich cornea were well preserved after the decellularization process. In vitro, the methyl thiazolyl tetrazolium results revealed that extracts of the acellular ostrich corneas (AOCs) had no inhibitory effects on the proliferation of the corneal epithelial or endothelial cells or on the keratocytes. The rabbit lamellar keratoplasty showed that the transplanted AOCs were transparent and completely incorporated into the host cornea while corneal turbidity and graft dissolution occurred in the acellular porcine cornea (APC) transplantation. The phenotype of the reconstructed cornea was similar to a normal rabbit cornea with a high expression of cytokeratin 3 in the superficial epithelial cell layer. CONCLUSION We first used AOCs as scaffolds to reconstruct damaged corneas. Compared with porcine corneas, the anatomical structures of ostrich corneas are closer to those of human corneas. In accordance with the principle that structure determines function, a xenograft lamellar keratoplasty also confirmed that the AOC transplantation generated a superior outcome compared to that of the APC graft. PMID:27158598

  3. Development and characterization of acellular porcine pulmonary valve scaffolds for tissue engineering.

    PubMed

    Luo, Ji; Korossis, Sotirios A; Wilshaw, Stacy-Paul; Jennings, Louise M; Fisher, John; Ingham, Eileen

    2014-11-01

    Currently available replacement heart valves all have limitations. This study aimed to produce and characterize an acellular, biocompatible porcine pulmonary root conduit for reconstruction of the right ventricular outflow tract e.g., during Ross procedure. A process for the decellularization of porcine pulmonary roots was developed incorporating trypsin treatment of the adventitial surface of the scraped pulmonary artery and sequential treatment with hypotonic Tris buffer (HTB; 10 mM Tris pH 8.0, 0.1% (w/v) EDTA, and 10 KIU aprotinin), 0.1% (w/v) sodium dodecyl sulfate in HTB, two cycles of DNase and RNase, and sterilization with 0.1% (v/v) peracetic acid. Histology confirmed an absence of cells and retention of the gross histoarchitecture. Immunohistochemistry further confirmed cell removal and partial retention of the extracellular matrix, but a loss of collagen type IV. DNA levels were reduced by more than 96% throughout all regions of the acellular tissue and no functional genes were detected using polymerase chain reaction. Total collagen levels were retained but there was a significant loss of glycosaminoglycans following decellularization. The biomechanical, hydrodynamic, and leaflet kinematics properties were minimally affected by the process. Both immunohistochemical labeling and antibody absorption assay confirmed a lack of α-gal epitopes in the acellular porcine pulmonary roots and in vitro biocompatibility studies indicated that acellular leaflets and pulmonary arteries were not cytotoxic. Overall the acellular porcine pulmonary roots have excellent potential for development of a tissue substitute for right ventricular outflow tract reconstruction e.g., during the Ross procedure. PMID:24786313

  4. Update for nurse anesthetists. Part 6. Full-body patient simulation technology: gaining experience using a malignant hyperthermia model.

    PubMed

    Hotchkiss, M A; Mendoza, S N

    2001-02-01

    Simulation technology is extremely useful for training workers in a variety of industries. Simulation concepts have been developed and refined in full-body patient simulators. Contemporary full-body patient simulators can be used to teach the essential concepts of many healthcare professions, and they offer practice dealing with critical events, concentrating on the thought and decision-making processes related to favorable patient outcomes. Full-body patient simulators provide practitioners the opportunity to manage realistic and advanced physical findings in a variety of areas and are capable of responding to a large number of pharmacologic agents and a host of clinical interventions. The ability to combine high-fidelity educational tools with both classroom lecture and clinical experience provides nurse anesthetists the opportunity for a unique experience in a highly controlled and safe environment. Numerous technological and educational advantages and the chance for hands-on assessment and treatment of some of anesthesia's rarest and most life-threatening events provide a one-of-a-kind educational session for CRNAs.

  5. Synchronous concerted multiple-body photodissociation of oxalyl chloride explored by ab initio-based dynamics simulations.

    PubMed

    Fang, Qiu; Shen, Lin; Fang, Wei-Hai

    2013-07-14

    Photo-induced multiple body dissociation is of fundamental interest in chemistry and physics. A description of the mechanism associated with n-body (n ≥ 3) photodissociation has proven to be an intriguing and yet challenging issue in the field of chemical dynamics. Oxalyl chloride, (ClCO)2, is the sole molecule reported up to date that can undergo four-body dissociation following absorption of a single UV photon, with a rich history of mechanistic debate. In the present work, the combined electronic structure calculations and dynamics simulations have been performed at the advanced level, which provides convincing evidence for resolving the mechanistic debate. More importantly, synchronous and asynchronous concertedness were explored for the first time for the (ClCO)2 photodissociation, which is based on the simulated time constants for the C-C and C-Cl bond fissions. Upon photoexcitation of (ClCO)2 to the S1 state, the adiabatic C-C or C-Cl fission takes place with little possibility. The four-body dissociation to 2Cl((2)P) and 2CO((1)Σ) was determined to a dominant channel with its branch of ∼0.7, while the three-body dissociation to ClCO((2)A(')) + CO((1)Σ) + Cl((2)P) was predicted to play a minor role in the (ClCO)2 photodissociation at 193 nm. Both the four-body and three-body dissociations are non-adiabatic processes, which proceed in a synchronous concerted way as a result of the S1 → S0 internal conversion. There is a little possibility for two-body dissociation to occur in the S0 and S1 states. PMID:23862946

  6. Advances in Turbulent Combustion Dynamics Simulations in Bluff-Body Stabilized Flames

    NASA Astrophysics Data System (ADS)

    Tovar, Jonathan Michael

    This work examines the three main aspects of bluff-body stabilized flames: stationary combustion, lean blow-out, and thermo-acoustic instabilities. For the cases of stationary combustion and lean blow-out, an improved version of the Linear Eddy Model approach is used, while in the case of thermo-acoustic instabilities, the effect of boundary conditions on the predictions are studied. The improved version couples the Linear Eddy Model with the full-set of resolved scale Large Eddy Simulation equations for continuity, momentum, energy, and species transport. In traditional implementations the species equations are generally solved using a Lagrangian method which has some significant limitations. The novelty in this work is that the Eulerian species concentration equations are solved at the resolved scale and the Linear Eddy Model is strictly used to close the species production term. In this work, the improved Linear Eddy Model approach is applied to predict the flame properties inside the Volvo rig and it is shown to over-predict the flame temperature and normalized velocity when compared to experimental data using a premixed single step global propane reaction with an equivalence ratio of 0.65. The model is also applied to predict lean blow-out and is shown to predict a stable flame at an equivalence ratio of 0.5 when experiments achieve flame extinction at an equivalence ratio of 0.55. The improved Linear Eddy Model is, however, shown to be closer to experimental data than a comparable reactive flow simulation that uses laminar closure of the species source terms. The thermo-acoustic analysis is performed on a combustor rig designed at the Air Force Research Laboratory. The analysis is performed using a premixed single step global methane reaction for laminar reactive flow and shows that imposing a non-physical boundary condition at the rig exhaust will result in the suppression of acoustic content inside the domain and can alter the temperature contours in non

  7. Wind-tunnel investigation of the descent characteristics of bodies of revolution simulating anti-personnel bombs

    NASA Technical Reports Server (NTRS)

    Sher, S. H.

    1951-01-01

    An investigation has been conducted in the Langley 20-foot free spinning tunnel to study the relative behavior in descent of a number of homogeneous balsa bodies of revolution simulating anti-personnel bombs with a small cylindrical exploding device suspended approximately 10 feet below the bomb. The bodies of revolution included hemispherical, near-hemispherical, and near-paraboloid shapes. The ordinates of one near-paraboloid shape were specified by the Office of the Chief of Ordnance, U. S. Army. The behavior of the various bodies without the cylinder was also investigated. The results of the investigation indicated that several of the bodies descended vertically with their longitudinal axis, suspension line, and small cylinder in a vertical attitude,. However, the body, the ordinates of which had been specified by the Office of the Chief of Ordnance, U. S. Army, oscillated considerably from a vertical attitude while descending and therefore appeared unsuitable for its intended use. The behavior of this body became satisfactory when its center of gravity was moved well forward from its original position. In general, the results indicated that the descent characteristics of the bodies of revolution become more favorable as their shapes approached that of a hemisphere.

  8. Reproducibility of a continuous ramp lower body negative pressure protocol for simulating hemorrhage

    PubMed Central

    Kay, Victoria L; Rickards, Caroline A

    2015-01-01

    Central hypovolemia elicited by application of lower body negative pressure (LBNP) has been used extensively to simulate hemorrhage in human subjects. Traditional LBNP protocols incorporate progressive steps in pressure held for specific time intervals. The aim of this study was to assess the reproducibility of applying continuous LBNP at a constant rate until presyncope to replicate actual bleeding. During two trials (≥4 weeks intervening), LBNP was applied at a rate of 3 mmHg/min in 18 healthy human subjects (12M; 6F) until the onset of presyncopal symptoms. Heart rate (HR), mean arterial pressure (MAP), stroke volume (SV), total peripheral resistance (TPR), mean middle and posterior cerebral artery velocities (MCAv, PCAv), and cerebral oxygen saturation (ScO2) were measured continuously. Time to presyncope (TTPS) and hemodynamic responses were compared between the two trials. TTPS (1649 ± 98 sec vs. 1690 ± 88 sec; P = 0.47 [t-test]; r = 0.77) and the subsequent magnitude of central hypovolemia (%Δ SV −54 ± 4% vs. −53 ± 4%; P = 0.55) were similar between trials. There were no statistically distinguishable differences at either baseline (P ≥ 0.17) or presyncope between trials for HR, MAP, TPR, mean MCAv, mean PCAv, or ScO2 (P ≥ 0.19). The rate of change from baseline to presyncope for all hemodynamic responses was also similar between trials (P ≥ 0.12). Continuous LBNP applied at a rate of 3 mmHg/min was reproducible in healthy human subjects, eliciting similar reductions in central blood volume and subsequent reflex hemodynamic responses. PMID:26607173

  9. Oral Factors Affecting Titanium Elution and Corrosion: An In Vitro Study Using Simulated Body Fluid

    PubMed Central

    Suito, Hideki; Iwawaki, Yuki; Goto, Takaharu; Tomotake, Yoritoki; Ichikawa, Tetsuo

    2013-01-01

    Objectives Ti, which is biocompatible and resistant to corrosion, is widely used for dental implants, particularly in patients allergic to other materials. However, numerous studies have reported on Ti allergy and the in vitro corrosion of Ti. This study investigated the conditions that promote the elution of Ti ions from Ti implants. Methods Specimens of commercially pure Ti, pure nickel, a magnetic alloy, and a gold alloy were tested. Each specimen was immersed in a simulated body fluid (SBF) whose pH value was controlled (2.0, 3.0, 5.0, 7.4, and 9.0) using either hydrochloric or lactic acid. The parameters investigated were the following: duration of immersion, pH of the SBF, contact with a dissimilar metal, and mechanical stimulus. The amounts of Ti ions eluted were measured using a polarized Zeeman atomic absorption spectrophotometer. Results Eluted Ti ions were detected after 24 h (pH of 2.0 and 3.0) and after 48 h (pH of 9.0). However, even after 4 weeks, eluted Ti ions were not detected in SBF solutions with pH values of 5.0 and 7.4. Ti elution was affected by immersion time, pH, acid type, mechanical stimulus, and contact with a dissimilar metal. Elution of Ti ions in a Candida albicans culture medium was observed after 72 h. Significance Elution of Ti ions in the SBF was influenced by its pH and by crevice corrosion. The results of this study elucidate the conditions that lead to the elution of Ti ions in humans, which results in implant corrosion and Ti allergy. PMID:23762461

  10. Supermassive Black Hole Growth and Merger Rates from Cosmological N-body Simulations

    SciTech Connect

    Micic, Miroslav; Holley-Bockelmann, Kelly; Sigurdsson, Steinn; Abel, Tom; /SLAC

    2007-10-29

    Understanding how seed black holes grow into intermediate and supermassive black holes (IMBHs and SMBHs, respectively) has important implications for the duty-cycle of active galactic nuclei (AGN), galaxy evolution, and gravitational wave astronomy. Most studies of the cosmological growth and merger history of black holes have used semianalytic models and have concentrated on SMBH growth in luminous galaxies. Using high resolution cosmological N-body simulations, we track the assembly of black holes over a large range of final masses - from seed black holes to SMBHs - over widely varying dynamical histories. We used the dynamics of dark matter halos to track the evolution of seed black holes in three different gas accretion scenarios. We have found that growth of a Sagittarius A* - size SMBH reaches its maximum mass M{sub SMBH}={approx}10{sup 6}M{sub {circle_dot}} at z{approx}6 through early gaseous accretion episodes, after which it stays at near constant mass. At the same redshift, the duty-cycle of the host AGN ends, hence redshift z=6 marks the transition from an AGN to a starburst galaxy which eventually becomes the Milky Way. By tracking black hole growth as a function of time and mass, we estimate that the IMBH merger rate reaches a maximum of R{sub max}=55 yr{sup -1} at z=11. From IMBH merger rates we calculate N{sub ULX}=7 per Milky Way type galaxy per redshift in redshift range 2 {approx}< z {approx}< 6.

  11. N-body simulations of oligarchic growth of Mars: Implications for Hf-W chronology

    NASA Astrophysics Data System (ADS)

    Morishima, Ryuji; Golabek, Gregor J.; Samuel, Henri

    2013-03-01

    Dauphas and Pourmand [2011. Hf-W-Th evidence for rapid growth of Mars and its status as a planetary embryo. Nature 473, 489-492] estimated the accretion timescale of Mars to be 1 .8-1.0+0.9 Myr from the W isotopes of Martian meteorites. This timescale was derived assuming perfect metal-silicate equilibration between the impactor and the target's mantle. However, in the case of a small impactor most likely only a fraction of the target's mantle is involved in the equilibration, while only a small part of the impactor's core equilibrates in the case of a giant impact. We examined the effects of imperfect equilibration using results of high-resolution N-body simulations for the oligarchic growth stage. These effects were found to be small as long as a planetary embryo has a deep liquid magma ocean during its accretion. The effect due to partial involvement of the target's mantle in equilibration is small due to the low metal-silicate partition coefficient for W suggested from the low Hf/W ratio of the Martian mantle. The effect due to partial involvement of the impactor's core is also small because a large fraction of the embryo mass is delivered from small planetesimals, which are likely to fully equilibrate in the deep magma ocean on the embryo. The accretion timescale of Mars estimated by the Hf-W chronology is shorter than that expected for the minimum mass solar nebula model as long as more than 10% of each impactor's core re-equilibrates with the Martian mantle and the final stages of accretion are prolonged. This probably indicates that accretion of Mars rapidly proceeded due to solid and gas surface densities significantly larger than those for the minimum mass solar nebula or due to accretion of small fragments or pebbles.

  12. TRIS buffer in simulated body fluid distorts the assessment of glass-ceramic scaffold bioactivity.

    PubMed

    Rohanová, Dana; Boccaccini, Aldo Roberto; Yunos, Darmawati Mohamad; Horkavcová, Diana; Březovská, Iva; Helebrant, Aleš

    2011-06-01

    The paper deals with the characterisation of the bioactive phenomena of glass-ceramic scaffold derived from Bioglass® (containing 77 wt.% of crystalline phases Na(2)O·2CaO·3SiO(2) and CaO·SiO(2) and 23 wt.% of residual glass phase) using simulated body fluid (SBF) buffered with tris-(hydroxymethyl) aminomethane (TRIS). A significant effect of the TRIS buffer on glass-ceramic scaffold dissolution in SBF was detected. To better understand the influence of the buffer, the glass-ceramic scaffold was exposed to a series of in vitro tests using different media as follows: (i) a fresh liquid flow of SBF containing tris (hydroxymethyl) aminomethane; (ii) SBF solution without TRIS buffer; (iii) TRIS buffer alone; and (iv) demineralised water. The in vitro tests were provided under static and dynamic arrangements. SBF buffered with TRIS dissolved both the crystalline and residual glass phases of the scaffold and a crystalline form of hydroxyapatite (HAp) developed on the scaffold surface. In contrast, when TRIS buffer was not present in the solutions only the residual glassy phase dissolved and an amorphous calcium phosphate (Ca-P) phase formed on the scaffold surface. It was confirmed that the TRIS buffer primarily dissolved the crystalline phase of the glass-ceramic, doubled the dissolving rate of the scaffold and moreover supported the formation of crystalline HAp. This significant effect of the buffer TRIS on bioactive glass-ceramic scaffold degradation in SBF has not been demonstrated previously and should be considered when analysing the results of SBF immersion bioactivity tests of such systems.

  13. High fidelity quasi steady-state aerodynamic model effects on race vehicle performance predictions using multi-body simulation

    NASA Astrophysics Data System (ADS)

    Mohrfeld-Halterman, J. A.; Uddin, M.

    2016-07-01

    We described in this paper the development of a high fidelity vehicle aerodynamic model to fit wind tunnel test data over a wide range of vehicle orientations. We also present a comparison between the effects of this proposed model and a conventional quasi steady-state aerodynamic model on race vehicle simulation results. This is done by implementing both of these models independently in multi-body quasi steady-state simulations to determine the effects of the high fidelity aerodynamic model on race vehicle performance metrics. The quasi steady state vehicle simulation is developed with a multi-body NASCAR Truck vehicle model, and simulations are conducted for three different types of NASCAR race tracks, a short track, a one and a half mile intermediate track, and a higher speed, two mile intermediate race track. For each track simulation, the effects of the aerodynamic model on handling, maximum corner speed, and drive force metrics are analysed. The accuracy of the high-fidelity model is shown to reduce the aerodynamic model error relative to the conventional aerodynamic model, and the increased accuracy of the high fidelity aerodynamic model is found to have realisable effects on the performance metric predictions on the intermediate tracks resulting from the quasi steady-state simulation.

  14. Numerical simulation of rotating body movement in medium with various densities

    NASA Astrophysics Data System (ADS)

    Tenenev, Valentin A.; Korolev, Stanislav A.; Rusyak, Ivan G.

    2016-10-01

    The paper proposes an approach to calculate the motion of rotating bodies in resisting medium by solving the Kirchhoff equations of motion in a coordinate system moving with the body and in determination of aerodynamic characteristics of the body with a given geometry by solving the Navier-Stokes equations. We present the phase trajectories of the perturbed motion of a rotating projectile in media with different densities: gas and liquid.

  15. Chaotic versus nonchaotic stochastic dynamics in Monte Carlo simulations: a route for accurate energy differences in N-body systems.

    PubMed

    Assaraf, Roland; Caffarel, Michel; Kollias, A C

    2011-04-15

    We present a method to efficiently evaluate small energy differences of two close N-body systems by employing stochastic processes having a stability versus chaos property. By using the same random noise, energy differences are computed from close trajectories without reweighting procedures. The approach is presented for quantum systems but can be applied to classical N-body systems as well. It is exemplified with diffusion Monte Carlo simulations for long chains of hydrogen atoms and molecules for which it is shown that the long-standing problem of computing energy derivatives is solved. PMID:21568537

  16. Attitude dynamics simulation subroutines for systems of hinge-connected rigid bodies with nonrigid appendages

    NASA Technical Reports Server (NTRS)

    Fleischer, G. E.; Likins, P. W.

    1975-01-01

    Three computer subroutines designed to solve the vector-dyadic differential equations of rotational motion for systems that may be idealized as a collection of hinge-connected rigid bodies assembled in a tree topology, with an optional flexible appendage attached to each body are reported. Deformations of the appendages are mathematically represented by modal coordinates and are assumed small. Within these constraints, the subroutines provide equation solutions for (1) the most general case of unrestricted hinge rotations, with appendage base bodies nominally rotating at a constant speed, (2) the case of unrestricted hinge rotations between rigid bodies, with the restriction that those rigid bodies carrying appendages are nominally nonspinning, and (3) the case of small hinge rotations and nominally nonrotating appendages. Sample problems and their solutions are presented to illustrate the utility of the computer programs.

  17. Comparison of Intrinsic Alignment of Galaxies in MassiveBlack-II Hydroynamic and N-body Simulations

    NASA Astrophysics Data System (ADS)

    Tenneti, Ananth; Mandelbaum, Rachel; DiMatteo, Tiziana; Khandai, Nishikanta

    2015-01-01

    The intrinsic alignment of galaxies with the large-scale density field is an important astrophysical systematic in upcoming weak lensing surveys whilst offering insights into galaxy formation and evolution. We compare the intrinsic alignments of galaxies in the cosmological hydrodynamic MassiveBlack-II (MBII) simulation that includes stellar matter and AGN feedback, in a volume of (100h-1Mpc)3 with that of a dark matter only N-body simulation (DMO) performed with the same volume, resolution, cosmological parameters, and initial conditions. For subhalos matched in the two simulations, we find that the axis ratios of the dark matter subhalos of MBII, obtained using the reduced inertia tensor are larger, meaning that subhalos in MB-II are rounder than in the DMO simulation. The shapes of stellar matter in subhalos of MBII are more misaligned with the shapes of dark matter in the corresponding subhalos of the DMO simulation when compared to the misalignment with dark matter shapes of MBII. The fractional change in the mean misalignment angle is larger in galaxies of low mass and it varies from ~ 37% - 13% as we go from low to high mass galaxies. Similarly, the projected intrinsic alignment density-shape correlation function, wδ+ for the shapes of galaxies in the MBII simulation is smaller in comparison to the wδ+ obtained using shapes of dark matter subhalos in DMO with larger decrease at low mass thresholds. These results are necessary if we wish to map the intrinsic alignments from hydrodynamic simulations onto large mock catalogs based on N-body simulations that will be used by upcoming surveys to interpret weak lensing measurements.

  18. Degradation behavior of hydroxyapatite/poly(lactic-co-glycolic) acid nanocomposite in simulated body fluid

    SciTech Connect

    Liuyun, Jiang; Chengdong, Xiong; Lixin, Jiang; Lijuan, Xu

    2013-10-15

    Graphical abstract: In this manuscript, we initiated a systematic study to investigate the effect of HA on thermal properties, inner structure, reduction of mechanical strength, surface morphology and the surface deposit of n-HA/PLGA composite with respect to the soaking time. The results showed that n-HA played an important role in improving the degradation behavior of n-HA/PLGA composite, which can accelerate the degradation of n-HA/PLGA composite and endow it with bioactivity, after n-HA was detached from PLGA during the degradation, so that n-HA/PLGA composite may have a more promising prospect of the clinical application than pure PLGA as bone fracture internal fixation materials, and the results would be of reference significance to predict the in vivo degradation and biological properties. - Highlights: • Effect of n-HA on degradation behavior of n-HA/PLGA composite was investigated. • Degradation behaviors of n-HA/PLGA and PLGA were carried out in SBF for 6 months. • Viscosity, thermal properties, inner structure and bending strength were tested. • n-HA can accelerate the degradation and endows it with bioactivity. - Abstract: To investigate the effect of hydroxyapatite(HA) on the degradation behavior of hydroxyapatite/poly(lactic-co-glycolic) acid (HA/PLGA) nanocomposite, the degradation experiment of n-HA/PLGA composite and pure PLGA were carried out by soaking in simulated body fluid(SBF) at 37 °C for 1, 2, 4 and 6 months. The change of intrinsic viscosity, thermal properties, inner structure, bending strength reduction, surface morphology and the surface deposit of n-HA/PLGA composite and pure PLGA with respect to the soaking time were investigated by means of UbbeloHde Viscometer, differential scanning calorimeter (DSC), scanning electron microscope(SEM), electromechanical universal tester, a conventional camera and X-ray diffraction (XRD). The results showed that n-HA played an important role in improving the degradation behavior of n

  19. Surface structure and biocompatibility of demineralized dentin matrix granules soaked in a simulated body fluid

    NASA Astrophysics Data System (ADS)

    Akazawa, Toshiyuki; Murata, Masaru; Hino, Jun; Nagano, Futami; Shigyo, Tatsuhiro; Nomura, Takafumi; Inano, Hiroyuki; Itabashi, Kohji; Yamagishi, Tohru; Nakamura, Katsuo; Takahashi, Touru; Iida, Shunji; Kashiwazaki, Haruhiko

    2012-12-01

    Demineralized dentin matrix (DDM) granules with excellent biocompatibility were easily prepared using unnecessary human teeth by a new cooling-pulverizing and demineralizing technique. Extracted human teeth were pulverized together with saline ice at 12,000 rpm-rotation number of a ZrO2 blade for 30 s in a ZrO2 vessel. The pulverized granules exhibited the particle size distribution of 0.5-2 mm that was efficient for regeneration of alveolar bone. The (Ca/P) ratios of the granules were 1.60-1.66, which were close to the stoichiometric value of 1.67 for standard hydroxyapatite (HAp). Small amounts of Na+ and Mg2+ ions present at less than 1% were detected. The pulverized granules were dissolved with stirring under 500 rpm for 10-60 min in 2.0%-HNO3 solutions to obtain partial or complete DDM granules. As the dissolution time increased, crystallinity of HAp phase lowered and asperity on surfaces of the granules became outstanding due to elution of mineral components. At the dissolution of 60 min, the pulverizing granules were completely demineralized and the weight decreased to about one-fifth. To improve surface activity of the DDM granules without denaturation of bone growth factors, the DDM granules were soaked at 309.5 K and pH 7.40 in a simulated body fluid (SBF). HAp microcrystals were gradually precipitated on surfaces of the DDM granules with increasing the soaking time. Different morphology of the precipitates was observed, depending on the demineralization situation of the pulverized granules. For the DDM with low dissolution efficiency of 42%, porous bone-like apatites at 24 h after the soaking and fiber-oriented aggregates at 144 h were recognized. The bioactive DDM granules were implanted into the subcutaneous tissues of the back region of rats. At 4 weeks after the implantation, bio-absorption by comparatively small amounts of multi-giant cells was recognized around the surface layers of DDM granules.

  20. A Biodegradation Study of SBA-15 Microparticles in Simulated Body Fluid and in Vivo.

    PubMed

    Choi, Youngjin; Lee, Jung Eun; Lee, Jung Heon; Jeong, Ji Hoon; Kim, Jaeyun

    2015-06-16

    Mesoporous silica has received considerable attention as a drug delivery vehicle because of its large surface area and large pore volume for loading drugs and large biomolecules. Recently, mesoporous silica microparticles have shown potential as a three-dimensional vaccine platform for modulating dendritic cells via spontaneous assembly of microparticles in a specific region after subcutaneous injection. For further in vivo applications, the biodegradation behavior of mesoporous silica microparticles must be studied and known. Until now, most biodegradation studies have focused on mesoporous silica nanoparticles (MSNs); here, we report the biodegradation of hexagonally ordered mesoporous silica, SBA-15, with micrometer-sized lengths (∼32 μm with a high aspect ratio). The degradation of SBA-15 microparticles was investigated in simulated body fluid (SBF) and in mice by analyzing the structural change over time. SBA-15 microparticles were found to degrade in SBF and in vivo. The erosion of SBA-15 under biological conditions led to a loss of the hysteresis loop in the nitrogen adsorption/desorption isotherm and fingerprint peaks in small-angle X-ray scattering, specifically indicating a degradation of ordered mesoporous structure. Via comparison to previous results of degradation of MSNs in SBF, SBA-15 microparticles degraded faster than MCM-41 nanoparticles presumably because SBA-15 microparticles have a pore size (∼8 nm) and a pore volume larger than those of MCM-41 mesoporous silica. The surface functional groups, the residual amounts of organic templates, and the hydrothermal treatment during the synthesis could affect the rate of degradation of SBA-15. In in vivo testing, previous studies focused on the evaluation of toxicity of mesoporous silica particles in various organs. In contrast, we studied the change in the physical properties of SBA-15 microparticles depending on the duration after subcutaneous injection. The pristine SBA-15 microparticles injected

  1. Laboratory Simulated Impact Shock on Ices relevant to Planetary icy Bodies

    NASA Astrophysics Data System (ADS)

    Nna Mvondo, D.; Khare, B. N.; McKay, C. P.; Ishihara, T.

    2006-12-01

    Several icy satellites of the outer planets show impact cratering features and it is recognised that this process may have played a crucial role in the formation and evolution of icy bodies. The effect of impact by extraterrestrial objects into the surface is commonly related to physical changes. Most of the research applied to impacts on ices has been developed to study and understand the cratering formation process and their physical, geophysical characteristics. Chemical changes and synthesis occurring on icy planetary surfaces are generally explained by the influence of UV photons and high-energy charged particles on ices. Nonetheless, impact process onto ices could be a source of local or global endogenic process and could be especially advantageous as an efficient energy source for driving interesting chemistry. Impacts can ensure that icy surfaces are eventually exposed, for a limited period of time, to aqueous melt in impact craters and ejecta and one can imagine that impurities included in the ice may undergo hydrolysis and other reactions under such conditions. Upon impact, the kinetic energy of the bolide is transferred to the ground liberating a great deal of stress energy which could initiate in situ a diverse series of chemical reactions in the fracture zone beneath the crater (Borucki et al., 2002; Jones and Lewis, 1987). Here we present a new approach testing in laboratory the chemistry conducted by impacts into planetary ices and we report the first experimental results. We have irradiated with a powerful pulsed laser icy mixtures of pure water ices containing CO2, Na2CO3, CH3OH and CH3OH / (NH4)2SO4 at 77K. GC-MS and FTIR analyses show that hydrogen peroxide, carbon monoxide and methanol are formed in irradiated H2O / CO2 ices. Ice containing sodium carbonate generates under simulated impact CO and CO2 which are also produced in impacted H2O / CH3OH and H2O / CH3OH / (NH4)2SO4 ices. But, in both latter icy mixtures, methane and more complex

  2. Electrochemical behaviour of Ti-Ni SMA and Co-Cr alloys in dynamic Tyrode's simulated body fluid.

    PubMed

    Liang, Chenghao; Zheng, Runfen; Huang, Naibao; Wu, Bo

    2010-05-01

    The electrochemical behaviour of Ti-Ni shape memory alloy and Co-Cr alloys were investigated in dynamic Tyrode's simulated body fluid on a Model CP6 Potentiostat/Galvanostat. The results indicated that, for all alloys, the anodic dissolution and the pitting sensitivity increased with the flow rate of the Tyrode's solution increasing while the open-circuit potentials and pitting corrosion potentials decreased with the Tyrode's solution increasing. Pitting corrosion of Ti-Ni alloy was easier than Co-Cr alloys. Since the solution's flow enhanced oxygen transform and made it easy to reach the surface of electrodes, the plateau of oxygen diffusion control was diminished. All these indicated that the cathodic reduction and the corrosion reaction, which was controlled by the electrochemical mass transport process, were all accelerated in dynamic Tyrode's simulated body fluid.

  3. Study report on combining diagnostic and therapeutic considerations with subsystem and whole-body simulation

    NASA Technical Reports Server (NTRS)

    Furukawa, S.

    1975-01-01

    Current applications of simulation models for clinical research described included tilt model simulation of orthostatic intolerance with hemorrhage, and modeling long term circulatory circulation. Current capabilities include: (1) simulation of analogous pathological states and effects of abnormal environmental stressors by the manipulation of system variables and changing inputs in various sequences; (2) simulation of time courses of responses of controlled variables by the altered inputs and their relationships; (3) simulation of physiological responses of treatment such as isotonic saline transfusion; (4) simulation of the effectiveness of a treatment as well as the effects of complication superimposed on an existing pathological state; and (5) comparison of the effectiveness of various treatments/countermeasures for a given pathological state. The feasibility of applying simulation models to diagnostic and therapeutic research problems is assessed.

  4. Importance of Three-Body Interactions in Molecular Dynamics Simulations of Water Demonstrated with the Fragment Molecular Orbital Method.

    PubMed

    Pruitt, Spencer R; Nakata, Hiroya; Nagata, Takeshi; Mayes, Maricris; Alexeev, Yuri; Fletcher, Graham; Fedorov, Dmitri G; Kitaura, Kazuo; Gordon, Mark S

    2016-04-12

    The analytic first derivative with respect to nuclear coordinates is formulated and implemented in the framework of the three-body fragment molecular orbital (FMO) method. The gradient has been derived and implemented for restricted second-order Møller-Plesset perturbation theory, as well as for both restricted and unrestricted Hartree-Fock and density functional theory. The importance of the three-body fully analytic gradient is illustrated through the failure of the two-body FMO method during molecular dynamics simulations of a small water cluster. The parallel implementation of the fragment molecular orbital method, its parallel efficiency, and its scalability on the Blue Gene/Q architecture up to 262,144 CPU cores are also discussed.

  5. Use of an acellular flowable dermal replacement scaffold on lower extremity sinus tract wounds: a retrospective series.

    PubMed

    Brigido, Stephen A; Schwartz, Edward; McCarroll, Raymond; Hardin-Young, Janet

    2009-04-01

    A novel injectable human dermal matrix has been developed for the treatment of complex diabetic sinus tract wounds. Bioengineered grafts are commercially available that have been somewhat effective in treating chronic wounds such as diabetic foot ulcers; however, these bioengineered grafts are only available in sheet form. These therapies are less effective in treating complex or irregularly shaped wounds that demonstrate tunnels or extensions into deep soft tissue. One acellular graft (GRAFTJACKET, Matrix, Wright Medical Technology, Arlington, Tennessee) that has been shown to effectively treat open wounds is also available in a micronized form (GRAFTJACKET Xpress Scaffold, Wright Medical Technology). This human dermal graft forms a flowable soft tissue scaffold that can be delivered via syringe into tunneling wounds. In this retrospective series, 12 patients with deep tunneling wounds were treated with GRAFTJACKET Xpress Scaffold and followed for 12 weeks. Complete wound healing was achieved in 10 of 12 patients within the 12-week evaluation. The average time to complete healing was 8.5 weeks, whereas the average time to depth healing was 7.8 weeks. The data from the study suggest that this injectable human dermal matrix has unique properties that allow it to facilitate healing of complex tunneling diabetic foot ulcers. The material is easy to prepare and inject into the wound, thereby preventing the necessity of extensive surgical exposure. The matrix supports neo-subcutaneous tissue formation and allows the body to rapidly repair these wounds.

  6. Adverse effects of tetanus toxoid, reduced diphtheria toxoid, and acellular pertussis vaccine in 6- to 7-year-old children.

    PubMed

    Wei, Sung-Hsi; Chao, Yen-Nan; Huang, Song-En; Lee, Tsuey-Feng; Chang, Luan-Yin

    2011-02-01

    Although the safety profile of tetanus toxoid, reduced diphtheria toxoid, and acellular pertussis (Tdap) vaccines in adolescents and adults has been documented, few data have reported about their adverse events in children. Healthy 6- to 7-year-old children who were immunized with Tdap vaccine were evaluated for adverse events on Days 1, 2, 4, and 7 postimmunization. Information of sex, body mass index (BMI), and previous diphtheria-pertussis-tetanus (DPT) immunization history was obtained and evaluated for the association with the adverse events. A total of 243 6- to 7-year-old children were immunized with Tdap. Among the 243 children immunized, remarkable adverse events included redness more than or equal to 10 mm in 47 (19%) children, induration more than or equal to 10 mm in 57 (23%), tenderness in 130 (53%), and fever in 12 (5%). Redness and induration resolved in 7 days and fever resolved on Day 4. The adverse events were not associated with gender, BMI above the mean value, or the type of fourth DPT immunization. Adverse events after Tdap vaccination were mild and dissolved within 7 days in 6- to 7-year-old children.

  7. Laboratory simulation of the structure of disturbed zones around bodies in space

    NASA Technical Reports Server (NTRS)

    Stone, N. H.; Oran, W. A.; Samir, U.

    1974-01-01

    Description of laboratory studies of certain aspects of the spacecraft/space plasma interaction regarding, in particular, the near and intermediate wake regions. The plasma wind tunnel facilities and the diagnostic techniques employed in these tests are described. Results are obtained which concern the variation of the normalized ion flux with normalized distance along the wake axis downstream from a conducting spherical body, the variation of the normalized width of the disturbed region with normalized distance downstream from the body center, and the location of the point of maximum ion current enhancement as a function of body potential.

  8. Computer simulations of comet- and asteroidlike bodies passing through the Venusian atmosphere: Preliminary results on atmospheric and ground shock effects

    NASA Technical Reports Server (NTRS)

    Roddy, D.; Hatfield, D.; Hassig, P.; Rosenblatt, M.; Soderblom, L.; Dejong, E.

    1992-01-01

    We have completed computer simulations that model shock effects in the venusian atmosphere caused during the passage of two cometlike bodies 100 m and 1000 m in diameter and an asteroidlike body 10 km in diameter. Our objective is to examine hypervelocity-generated shock effects in the venusian atmosphere for bodies of different types and sizes in order to understand the following: (1) their deceleration and depth of penetration through the atmosphere; and (2) the onset of possible ground-surface shock effects such as splotches, craters, and ejecta formations. The three bodies were chosen to include both a range of general conditions applicable to Venus as well as three specific cases of current interest. These calculations use a new multiphase computer code (DICE-MAZ) designed by California Research & Technology for shock-dynamics simulations in complex environments. The code was tested and calibrated in large-scale explosion, cratering, and ejecta research. It treats a wide range of different multiphase conditions, including material types (vapor, melt, solid), particle-size distributions, and shock-induced dynamic changes in velocities, pressures, temperatures (internal energies), densities, and other related parameters, all of which were recorded in our calculations.

  9. Electrochemical Investigations of Polycaprolactone-Coated AZ31 Mg Alloy in Earle's Balance Salt Solution and Conventional Simulated Body Fluid

    NASA Astrophysics Data System (ADS)

    Wilke, Benjamin M.; Zhang, Lei

    2016-06-01

    Polycaprolactone (PCL) coating has been shown to increase the corrosion resistance of magnesium alloys when exposed to a simulated body fluid. A PCL dip coating was applied to AZ31 Mg alloy. Samples were immersed in both Earle's Balance Salt Solution (EBSS) and conventional simulated body fluids (c-SBF) up to 14 days. Microscopic morphology, electrochemical impedance spectroscopy, and potentiodynamic polarization tests were performed to evaluate the corrosion behavior changes of PCL coatings against immersion times in EBSS and c-SBF as compared to the uncoated AZ31 substrate. PCL-coated samples demonstrated improved corrosion resistance compared to bare AZ31 in both EBSS and c-SBF, indicating that the PCL coating exhibited good corrosion protection of AZ31 in simulated body fluid. Samples immersed in EBSS showed significantly higher electrochemical impedance values and slower corrosion progression as compared to the samples in c-SBF, because of the decreased chloride content and CO2 buffering mechanism of the EBSS.

  10. The use of finite elements to model soil/track interactions in coupled multi-body dynamic simulations: Is real time simulation feasible?

    SciTech Connect

    Canfield, T.R.; Murray, M.J.

    1992-05-01

    Finite element methods (FEM) employing the arbitrary Lagrangian-Eulerian (ALE) formulation may be used to model soil in contact with the wheels or the tracks of vehicles in off-road mobility simulations. Coupling ALE finite element methods with recursive multi-body dynamics may allow real-time simulation of vehicles off-road provided sufficient computational resources are available. The requirements of these approach will be discussed with emphasis on parallel implementation. Estimates of expected performance are calculated based on the current trend in the development of advanced computer architectures. Factors important in estimating the feasibility of using finite element methodology in real time will be considered. Among these factors are the element size, the number of elements and the rate of computation, as well as the physical requirements of the simulations.

  11. The use of finite elements to model soil/track interactions in coupled multi-body dynamic simulations: Is real time simulation feasible

    SciTech Connect

    Canfield, T.R. ); Murray, M.J. )

    1992-05-01

    Finite element methods (FEM) employing the arbitrary Lagrangian-Eulerian (ALE) formulation may be used to model soil in contact with the wheels or the tracks of vehicles in off-road mobility simulations. Coupling ALE finite element methods with recursive multi-body dynamics may allow real-time simulation of vehicles off-road provided sufficient computational resources are available. The requirements of these approach will be discussed with emphasis on parallel implementation. Estimates of expected performance are calculated based on the current trend in the development of advanced computer architectures. Factors important in estimating the feasibility of using finite element methodology in real time will be considered. Among these factors are the element size, the number of elements and the rate of computation, as well as the physical requirements of the simulations.

  12. JSPAM: A restricted three-body code for simulating interacting galaxies

    NASA Astrophysics Data System (ADS)

    Wallin, J. F.; Holincheck, A. J.; Harvey, A.

    2016-07-01

    Restricted three-body codes have a proven ability to recreate much of the disturbed morphology of actual interacting galaxies. As more sophisticated n-body models were developed and computer speed increased, restricted three-body codes fell out of favor. However, their supporting role for performing wide searches of parameter space when fitting orbits to real systems demonstrates a continuing need for their use. Here we present the model and algorithm used in the JSPAM code. A precursor of this code was originally described in 1990, and was called SPAM. We have recently updated the software with an alternate potential and a treatment of dynamical friction to more closely mimic the results from n-body tree codes. The code is released publicly for use under the terms of the Academic Free License ("AFL") v. 3.0 and has been added to the Astrophysics Source Code Library.

  13. DermACELL: Human Acellular Dermal Matrix Allograft A Case Report.

    PubMed

    Cole, Windy E

    2016-03-01

    Diabetes often causes ulcers on the feet of diabetic patients. A 56-year-old, insulin-dependent, diabetic woman presented to the wound care center with a Wagner grade 3 ulcer of the right heel. She reported a 3-week history of ulceration with moderate drainage and odor and had a history of ulceration and osteomyelitis in the contralateral limb. Rigorous wound care, including hospitalization; surgical incision and drainage; intravenous antibiotic drug therapy; vacuum-assisted therapy; and a new room temperature, sterile, human acellular dermal matrix graft were used to heal the wound, save her limb, and restore her activities of daily living. This case presentation involves alternative treatment of a diabetic foot ulcer with this new acellular dermal matrix, DermACELL. PMID:27031550

  14. Prosthetic Breast Reconstruction With Acellular Dermal Matrices: Achieving Predictability and Reproducibility.

    PubMed

    Nahabedian, Maurice Y

    2016-05-01

    The use of acellular dermal matrices in the setting of prosthetic breast reconstruction has captured the attention of many plastic surgeons. The regenerative capacity of these materials has provided additional tissue support to the mastectomy skin flaps with the ultimate result of improving surgical and aesthetic outcomes. Despite the benefits, there remains a significant diversity with regard to outcomes with some surgeons reporting increased morbidity. The reasons for this are varied but ultimately related to differences in patient selection and surgical techniques. The purpose of this article is to provide strategies for using acellular dermal matrix to achieve success in a manner that is usually associated with outcomes that are predictable and reproducible. PMID:27579223

  15. Pioneering technique using Acellular Dermal Matrix in the rescue of a radiation ulcer

    PubMed Central

    NASEEM, S.; PATEL, A.D.; DEVALIA, H.

    2016-01-01

    Background Radiotherapy as an adjuvant to mastectomy is integral to the treatment of breast cancer, but can result in skin ulceration. Skin ulceration following radiotherapy is traditionally managed by removing the implant and allowing the skin to heal by secondary intention. Case report A 42-year-old woman underwent radiotherapy following a breast reconstruction. She developed a 2 x 3cm radiation ulcer. The ulcer was managed by removing the implant and performing capsulectomy. A Beckers 50 expander was placed and reinforced with acellular dermal matrix inferolaterally. At follow-up the patient had a good cosmetic outcome. Conclusion Post-radiation skin ulcers present a challenge to treat with no current standardised management. The use of acellular dermal matrix may present a new technique to promote healing in these testing cases. PMID:27142826

  16. Prosthetic Breast Reconstruction With Acellular Dermal Matrices: Achieving Predictability and Reproducibility

    PubMed Central

    2016-01-01

    Summary: The use of acellular dermal matrices in the setting of prosthetic breast reconstruction has captured the attention of many plastic surgeons. The regenerative capacity of these materials has provided additional tissue support to the mastectomy skin flaps with the ultimate result of improving surgical and aesthetic outcomes. Despite the benefits, there remains a significant diversity with regard to outcomes with some surgeons reporting increased morbidity. The reasons for this are varied but ultimately related to differences in patient selection and surgical techniques. The purpose of this article is to provide strategies for using acellular dermal matrix to achieve success in a manner that is usually associated with outcomes that are predictable and reproducible. PMID:27579223

  17. The Cellular Immune Mechanism after Transfer of Chemically Extracted Acellular Nerve Xenografts

    PubMed Central

    Lin, Xingshi; Yang, Ruojia; He, Qing; Ruan, Dike

    2013-01-01

    Severe peripheral nerve defect by injuries causing functional loss require nerve grafting. Autograft has limitations for clinical use because it results in the creation of a new nerve injury and the generation of donor site morbidity. Based on these limitations, nerve allografts and xenografts provide a readily accessible alternative strategy. The aim of the present study was to observe the immune mechanism underlying the rejection of chemically extracted acellular nerve xenografts, and further evaluate immunogenicity of chemically treated acellular nerve grafts for clinical applications. A total of 160 BALB/c mice were randomly divided into a negative contrast group (NC, 40 mice), a fresh autograft group (AG, 40 mice), a fresh xenogeneic nerve group (FXN, 40 mice) and a chemically extracted acellular xenogeneic nerve group (CEXN, 40 mice). Various types of nerve grafts were implanted into the thigh muscle of BALB/C mice in the corresponding groups. At 3, 7, 14 and 28 days post-operation, the mice (10 mice from each group) were sacrificed and their spleens were extracted. The spleens were ground into paste. The erythrocytes and other cells were lysed using distilled water and the T lymphocytes were collected. Fluorescein isothiocyanate (FITC) -labeled monoclonal antibodies (CD3, CD4, CD8, CD25, IL-2, IFN-γ and TNF-α) were then added to the solution. The Fluorescence Activated Cell Sorting (FACS) was used to determine the positivity rate of the cells combined with the monoclonal antibodies above. No significant statistical differences were observed between the CEXN, NC and AG groups, so that no obvious immune rejections were observed among the chemically extracted acellular nerve xenografts. PMID:23874771

  18. Hertwig's epithelial root sheath cell behavior during initial acellular cementogenesis in rat molars.

    PubMed

    Yamamoto, Tsuneyuki; Yamamoto, Tomomaya; Yamada, Tamaki; Hasegawa, Tomoka; Hongo, Hiromi; Oda, Kimimitsu; Amizuka, Norio

    2014-11-01

    This study was designed to examine developing acellular cementum in rat molars by immunohistochemistry, to elucidate (1) how Hertwig's epithelial root sheath disintegrates and (2) whether epithelial sheath cells transform into cementoblasts through epithelial-mesenchymal transition (EMT). Initial acellular cementogenesis was divided into three developmental stages, which can be seen in three different portions of the root: portion 1, where the epithelial sheath is intact; portion 2, where the epithelial sheath becomes fragmented; and portion 3, where acellular cementogenesis begins. Antibodies against three kinds of matrix proteinases, which degrade epithelial sheath-maintaining factors, including basement membrane and desmosomes, were used to investigate proteolytic activity of the epithelial sheath. Tissue non-specific alkaline phosphatase (TNALP) and keratin were used to investigate EMT. Epithelial sheath cells showed immunoreactivity for all three enzymes at fragmentation, which suggests that epithelial sheath disintegration is enzymatically mediated. Dental follicle cells and cementoblasts showed intense immunoreactivity for TNALP, and from portion 1 through to 3, the reaction extended from the alveolar bone-related zone to the root-related zone. Cells possessing keratin/TNALP double immunoreactivity were virtually absent. Keratin-positive epithelial sheath cells showed negligible immunoreactivity for TNALP, and epithelial cells did not appear to migrate to the dental follicle. Together, these findings suggest that a transition phenotype between epithelial cells and cementoblasts does not exist in the developing dental follicle and hence that epithelial sheath cells do not undergo EMT during initial acellular cementogenesis. In brief, this study supports the notion that cementoblasts derive from the dental follicle. PMID:24859538

  19. Control of propulsion and body lift during the first two stances of sprint running: a simulation study.

    PubMed

    Debaere, Sofie; Delecluse, Christophe; Aerenhouts, Dirk; Hagman, Friso; Jonkers, Ilse

    2015-01-01

    The aim of this study was to relate the contribution of lower limb joint moments and individual muscle forces to the body centre of mass (COM) vertical and horizontal acceleration during the initial two steps of sprint running. Start performance of seven well-trained sprinters was recorded using an optoelectronic motion analysis system and two force plates. Participant-specific torque-driven and muscle-driven simulations were conducted in OpenSim to quantify, respectively, the contributions of the individual joints and muscles to body propulsion and lift. The ankle is the major contributor to both actions during the first two stances, with an even larger contribution in the second compared to the first stance. Biarticular gastrocnemius is the main muscle contributor to propulsion in the second stance. The contribution of the hip and knee depends highly on the position of the athlete: During the first stance, where the athlete runs in a forward bending position, the knee contributes primarily to body lift and the hip contributes to propulsion and body lift. In conclusion, a small increase in ankle power generation seems to affect the body COM acceleration, whereas increases in hip and knee power generation tend to affect acceleration less.

  20. Control of propulsion and body lift during the first two stances of sprint running: a simulation study.

    PubMed

    Debaere, Sofie; Delecluse, Christophe; Aerenhouts, Dirk; Hagman, Friso; Jonkers, Ilse

    2015-01-01

    The aim of this study was to relate the contribution of lower limb joint moments and individual muscle forces to the body centre of mass (COM) vertical and horizontal acceleration during the initial two steps of sprint running. Start performance of seven well-trained sprinters was recorded using an optoelectronic motion analysis system and two force plates. Participant-specific torque-driven and muscle-driven simulations were conducted in OpenSim to quantify, respectively, the contributions of the individual joints and muscles to body propulsion and lift. The ankle is the major contributor to both actions during the first two stances, with an even larger contribution in the second compared to the first stance. Biarticular gastrocnemius is the main muscle contributor to propulsion in the second stance. The contribution of the hip and knee depends highly on the position of the athlete: During the first stance, where the athlete runs in a forward bending position, the knee contributes primarily to body lift and the hip contributes to propulsion and body lift. In conclusion, a small increase in ankle power generation seems to affect the body COM acceleration, whereas increases in hip and knee power generation tend to affect acceleration less. PMID:25798644

  1. Flow in complex domains simulated by Dissipative Particle Dynamics driven by geometry-specific body-forces

    NASA Astrophysics Data System (ADS)

    Yazdani, Alireza; Deng, Mingge; Caswell, Bruce; Karniadakis, George Em

    2016-01-01

    We demonstrate how the quality of simulations by Dissipative Particle Dynamics (DPD) of flows in complex geometries is greatly enhanced when driven by body forces suitably tailored to the geometry. In practice, the body force fields are most conveniently chosen to be the pressure gradient of the corresponding Navier-Stokes (N-S) flow. In the first of three examples, the driving-force required to yield a stagnation-point flow is derived from the pressure field of the potential flow for a lattice of counter-rotating line vortices. Such a lattice contains periodic squares bounded by streamlines with four vortices within them. Hence, the DPD simulation can be performed with periodic boundary conditions to demonstrate the value of a non-uniform driving-force without the need to model real boundaries. The second example is an irregular geometry consisting of a 2D rectangular cavity on one side of an otherwise uniform channel. The Navier-Stokes pressure field for the same geometry is obtained numerically, and its interpolated gradient is then employed as the driving-force for the DPD simulation. Finally, we present a third example, where the proposed method is applied to a complex 3D geometry of an asymmetric constriction. It is shown that in each case the DPD simulations closely reproduce the Navier-Stokes solutions. Convergence rates are found to be much superior to alternative methods; in addition, the range of convergence with respect to Reynolds number and Mach number is greatly extended.

  2. Mechanical properties of acellular mouse lungs after sterilization by gamma irradiation.

    PubMed

    Uriarte, Juan J; Nonaka, Paula N; Campillo, Noelia; Palma, Renata K; Melo, Esther; de Oliveira, Luis V F; Navajas, Daniel; Farré, Ramon

    2014-12-01

    Lung bioengineering using decellularized organ scaffolds is a potential alternative for lung transplantation. Clinical application will require donor scaffold sterilization. As gamma-irradiation is a conventional method for sterilizing tissue preparations for clinical application, the aim of this study was to evaluate the effects of lung scaffold sterilization by gamma irradiation on the mechanical properties of the acellular lung when subjected to the artificial ventilation maneuvers typical within bioreactors. Twenty-six mouse lungs were decellularized by a sodium dodecyl sulfate detergent protocol. Eight lungs were used as controls and 18 of them were submitted to a 31kGy gamma irradiation sterilization process (9 kept frozen in dry ice and 9 at room temperature). Mechanical properties of acellular lungs were measured before and after irradiation. Lung resistance (RL) and elastance (EL) were computed by linear regression fitting of recorded signals during mechanical ventilation (tracheal pressure, flow and volume). Static (Est) and dynamic (Edyn) elastances were obtained by the end-inspiratory occlusion method. After irradiation lungs presented higher values of resistance and elastance than before irradiation: RL increased by 41.1% (room temperature irradiation) and 32.8% (frozen irradiation) and EL increased by 41.8% (room temperature irradiation) and 31.8% (frozen irradiation). Similar increases were induced by irradiation in Est and Edyn. Scanning electron microscopy showed slight structural changes after irradiation, particularly those kept frozen. Sterilization by gamma irradiation at a conventional dose to ensure sterilization modifies acellular lung mechanics, with potential implications for lung bioengineering. PMID:25241281

  3. Preparation and characterization of an acellular bovine pericardium intended for manufacture of valve bioprostheses.

    PubMed

    Goissis, Gilberto; Giglioti, Aparecida de Fátima; Braile, Domingo Marcolino

    2011-05-01

    Major problems with biological heart valves post-implantation are associated with progressive structural deterioration and calcification attributed to glutaraldehyde processing, dead cells, and cell fragments present in the native tissue. In spite of these problems, glutaraldehyde still is the reagent of choice. The results with acellular matrix xenograft usually prepared by detergent treatment in association with enzymes are rather conflicting because while preserving mechanical properties, tissue morphology and collagen structure are process dependent. This work describes a chemical approach for the preparation of an acellular bovine pericardium matrix intended for the manufacture of heart valve bioprostheses. Cell removal was performed by an alkaline extraction in the presence of calcium salts for periods ranging from 6 to 48 h. The results showed that cell removal was achieved after 12 h, with swelling and negative charge increasing with processing time. Nevertheless, collagen fibril structure, ability to form fibrils, and stability to collagenase were progressive after 24-h processing. There was no denaturation of the collagen matrix. A process is described for the preparation of acellular bovine pericardium matrices with preserved fibril structure and morphology for the manufacture of cardiac valve bioprostheses and may be used in other applications for tissue reconstruction.

  4. Immunolocation of proteoglycans and bone-related noncollagenous glycoproteins in developing acellular cementum of rat molars.

    PubMed

    Yamamoto, T; Domon, T; Takahashi, S; Arambawatta, A K S; Wakita, M

    2004-09-01

    To elucidate the roles of proteoglycans of (PGs), bone sialoprotein (BSP), and osteopontin (OPN) in cementogenesis, their distribution was investigated in developing and established acellular cementum of rat molars by an immunoperoxidase method. To characterize PGs, antibodies against five species of glycosaminoglycans (GAGS), chondroitin-4-sulfate (C4S), chondroitin-6-sulfate (C6S), unsulfated chondroitin (C0S), dermatan sulfate (DS), and keratan sulfate (KS) were used. Routine histological staining was also applied. With onset of dentin mineralization, the initial cementum appeared on the dentin surface as a hematoxylin-stained fibril-poor layer. Subsequently, primitive principal fibers attached to the initial cementum. As the acellular cementum containing extrinsic fibers covered the initial cementum, the intal cementum formed the cemento-dentinal junction. Following immunohistochemistry at the earliest time of cementogenesis, the initial cementum was intensely immunoreactive for C4S, C6S, C0S, BSP, and OPN. After the initial cementum was embedded, neither the cemento-dentinal junction nor the cementum was immunoreactive for any GAG species. However, the cementum was immunoreactive for any GAG species. However, the cementum and cemento-dentinal were consistently immunoreactive for BSP. Although the cemento-dentinal junction was consistently immunoreactive for OPN, the remaining cementum showed no significant immunoreactivity. Thus, initial acellular cementogenesis requires a dense accumulation of PGs, BSP, and OPN, which may be associated with the mineralization process independently of collagen fibrils and initial principal fiber attachment. PMID:15278434

  5. Preparation and characterization of an acellular bovine pericardium intended for manufacture of valve bioprostheses.

    PubMed

    Goissis, Gilberto; Giglioti, Aparecida de Fátima; Braile, Domingo Marcolino

    2011-05-01

    Major problems with biological heart valves post-implantation are associated with progressive structural deterioration and calcification attributed to glutaraldehyde processing, dead cells, and cell fragments present in the native tissue. In spite of these problems, glutaraldehyde still is the reagent of choice. The results with acellular matrix xenograft usually prepared by detergent treatment in association with enzymes are rather conflicting because while preserving mechanical properties, tissue morphology and collagen structure are process dependent. This work describes a chemical approach for the preparation of an acellular bovine pericardium matrix intended for the manufacture of heart valve bioprostheses. Cell removal was performed by an alkaline extraction in the presence of calcium salts for periods ranging from 6 to 48 h. The results showed that cell removal was achieved after 12 h, with swelling and negative charge increasing with processing time. Nevertheless, collagen fibril structure, ability to form fibrils, and stability to collagenase were progressive after 24-h processing. There was no denaturation of the collagen matrix. A process is described for the preparation of acellular bovine pericardium matrices with preserved fibril structure and morphology for the manufacture of cardiac valve bioprostheses and may be used in other applications for tissue reconstruction. PMID:21595716

  6. Management of complex abdominal wall defects using acellular porcine dermal collagen.

    PubMed

    Chavarriaga, Luis Felipe; Lin, Edward; Losken, Albert; Cook, Michael W; Jeansonne, Louis O; White, Brent C; Sweeney, John F; Galloway, John R; Davis, S Scott

    2010-01-01

    Multiple techniques have been used for the repair of complex abdominal wall defects after recurrent incisional hernias with varying rates of success. Primary repair has been associated with high recurrence rates, and prosthetic mesh placement is contraindicated in contaminated surgical fields. The development of biologic prostheses has changed the approach to these difficult problems. This study evaluates the management of complex abdominal wall defects using acellular porcine dermal collagen. Between August 2006 and May 2007, 18 patients underwent abdominal wall reconstruction for complex defects with acellular porcine dermal collagen (CollaMend; Bard Inc., Warwick, RI). Patient demographics, preoperative risk factors, previous herniorrhaphy attempts, postoperative complications, recurrences, and long-term results were retrospectively reviewed. Records were reviewed at a mean follow up of 7.3 months; the recurrence rate was 44.4 per cent. A total of 38.9 per cent (seven of 18) developed a postoperative wound complications, including infection in 22.2 per cent (four of 18). All of the patients with infection required prosthesis removal as a result of encapsulation rather than incorporation of the biologic prosthesis. Acellular porcine dermal collagen has the potential for reconstruction of abdominal wall defects with postoperative wound occurrences comparable with other biologic materials. Encapsulation of the material was a major problem in cases with wound infection that required graft removal rather than local wound measures. Hernia recurrence and dehiscence of the graft were problems in noncompromised surgical fields.

  7. A Digital Simulation Program for Health Science Students to Follow Drug Levels in the Body

    ERIC Educational Resources Information Center

    Stavchansky, Salomon; And Others

    1977-01-01

    The Rayetheon Scientific Simulation Language (RSSL) program, an easily-used simulation on the CDC/6600 computer at the University of Texas at Austin, offers a simple method of solving differential equations on a digital computer. It is used by undergraduate biopharmaceutics-pharmacokinetics students and graduate students in all areas. (Author/LBH)

  8. A heterogeneous system based on GPU and multi-core CPU for real-time fluid and rigid body simulation

    NASA Astrophysics Data System (ADS)

    da Silva Junior, José Ricardo; Gonzalez Clua, Esteban W.; Montenegro, Anselmo; Lage, Marcos; Dreux, Marcelo de Andrade; Joselli, Mark; Pagliosa, Paulo A.; Kuryla, Christine Lucille

    2012-03-01

    Computational fluid dynamics in simulation has become an important field not only for physics and engineering areas but also for simulation, computer graphics, virtual reality and even video game development. Many efficient models have been developed over the years, but when many contact interactions must be processed, most models present difficulties or cannot achieve real-time results when executed. The advent of parallel computing has enabled the development of many strategies for accelerating the simulations. Our work proposes a new system which uses some successful algorithms already proposed, as well as a data structure organisation based on a heterogeneous architecture using CPUs and GPUs, in order to process the simulation of the interaction of fluids and rigid bodies. This successfully results in a two-way interaction between them and their surrounding objects. As far as we know, this is the first work that presents a computational collaborative environment which makes use of two different paradigms of hardware architecture for this specific kind of problem. Since our method achieves real-time results, it is suitable for virtual reality, simulation and video game fluid simulation problems.

  9. Investigation on aerodynamic characteristics of baseline-II E-2 blended wing-body aircraft with canard via computational simulation

    NASA Astrophysics Data System (ADS)

    Nasir, Rizal E. M.; Ali, Zurriati; Kuntjoro, Wahyu; Wisnoe, Wirachman

    2012-06-01

    Previous wind tunnel test has proven the improved aerodynamic charasteristics of Baseline-II E-2 Blended Wing-Body (BWB) aircraft studied in Universiti Teknologi Mara. The E-2 is a version of Baseline-II BWB with modified outer wing and larger canard, solely-designed to gain favourable longitudinal static stability during flight. This paper highlights some results from current investigation on the said aircraft via computational fluid dynamics simulation as a mean to validate the wind tunnel test results. The simulation is conducted based on standard one-equation turbulence, Spalart-Allmaras model with polyhedral mesh. The ambience of the flight simulation is made based on similar ambience of wind tunnel test. The simulation shows lift, drag and moment results to be near the values found in wind tunnel test but only within angles of attack where the lift change is linear. Beyond the linear region, clear differences between computational simulation and wind tunnel test results are observed. It is recommended that different type of mathematical model be used to simulate flight conditions beyond linear lift region.

  10. Distribution function approach to redshift space distortions. Part II: N-body simulations

    SciTech Connect

    Okumura, Teppei; Seljak, Uroš; McDonald, Patrick; Desjacques, Vincent E-mail: useljak@berkeley.edu E-mail: dvince@physik.uzh.ch

    2012-02-01

    Measurement of redshift-space distortions (RSD) offers an attractive method to directly probe the cosmic growth history of density perturbations. A distribution function approach where RSD can be written as a sum over density weighted velocity moment correlators has recently been developed. In this paper we use results of N-body simulations to investigate the individual contributions and convergence of this expansion for dark matter. If the series is expanded as a function of powers of μ, cosine of the angle between the Fourier mode and line of sight, then there are a finite number of terms contributing at each order. We present these terms and investigate their contribution to the total as a function of wavevector k. For μ{sup 2} the correlation between density and momentum dominates on large scales. Higher order corrections, which act as a Finger-of-God (FoG) term, contribute 1% at k ∼ 0.015hMpc{sup −1}, 10% at k ∼ 0.05hMpc{sup −1} at z = 0, while for k > 0.15hMpc{sup −1} they dominate and make the total negative. These higher order terms are dominated by density-energy density correlations which contributes negatively to the power, while the contribution from vorticity part of momentum density auto-correlation adds to the total power, but is an order of magnitude lower. For μ{sup 4} term the dominant term on large scales is the scalar part of momentum density auto-correlation, while higher order terms dominate for k > 0.15hMpc{sup −1}. For μ{sup 6} and μ{sup 8} we find it has very little power for k < 0.15hMpc{sup −1}, shooting up by 2–3 orders of magnitude between k < 0.15hMpc{sup −1} and k < 0.4hMpc{sup −1}. We also compare the expansion to the full 2-d P{sup ss}(k,μ), as well as to the monopole, quadrupole, and hexadecapole integrals of P{sup ss}(k,μ). For these statistics an infinite number of terms contribute and we find that the expansion achieves percent level accuracy for kμ < 0.15hMpc{sup −1} at 6-th order, but breaks down

  11. Linking long-term planetary N-body simulations with periodic orbits: application to white dwarf pollution

    NASA Astrophysics Data System (ADS)

    Antoniadou, Kyriaki I.; Veras, Dimitri

    2016-09-01

    Mounting discoveries of debris discs orbiting newly-formed stars and white dwarfs (WDs) showcase the importance of modeling the long-term evolution of small bodies in exosystems. WD debris discs are in particular thought to form from very long-term (0.1-5.0 Gyr) instability between planets and asteroids. However, the time-consuming nature of N-body integrators which accurately simulate motion over Gyrs necessitates a judicious choice of initial conditions. The analytical tools known as periodic orbits can circumvent the guesswork. Here, we begin a comprehensive analysis directly linking periodic orbits with N-body integration outcomes with an extensive exploration of the planar circular restricted three-body problem (CRTBP) with an outer planet and inner asteroid near or inside of the 2:1 mean motion resonance. We run nearly 1000 focused simulations for the entire age of the Universe (14 Gyr) with initial conditions mapped to the phase space locations surrounding the unstable and stable periodic orbits for that commensurability. In none of our simulations did the planar CRTBP architecture yield a long-timescale (≳ 0.25% of the age of the Universe) asteroid-star collision. The pericentre distance of asteroids which survived beyond this timescale (≈35 Myr) varied by at most about 60%. These results help affirm that collisions occur too quickly to explain WD pollution in the planar CRTBP 2:1 regime, and highlight the need for further periodic orbit studies with the eccentric and inclined TBP architectures and other significant orbital period commensurabilities.

  12. Numerical simulation of steady supersonic flow over spinning bodies of revolution

    NASA Technical Reports Server (NTRS)

    Sturek, W. B.; Schiff, L. B.

    1982-01-01

    A recently reported parabolized Navier-Stokes code has been employed to compute the supersonic flowfield about a spinning cone and spinning and nonspinning ogive cylinder and boattailed bodies of revolution at moderate incidence. The computations were performed for flow conditions where extensive measurements for wall pressure, boundary-layer velocity profiles, and Magnus force had been obtained. Comparisons between the computational results and experiment indicate excellent agreement for angles of attack up to 6 deg. At angles greater than 6 deg discrepancies are noted which are tentatively attributed to turbulence modeling errors. The comparisons for Magnus effects show that the code accurately predicts the effects of body shape for the selected models.

  13. An evaluation of serious neurological disorders following immunization: a comparison of whole-cell pertussis and acellular pertussis vaccines.

    PubMed

    Geier, David A; Geier, Mark R

    2004-08-01

    Serious neurological disorders reported following whole-cell pertussis in comparison to acellular pertussis vaccines were evaluated. The Vaccine Adverse Events Reporting System (VAERS) was analyzed for Emergency Department (ED) visits, life-threatening reactions, hospitalizations, disabilities, deaths, seizures, infantile spasms, encephalitis/encephalopathy, autism, Sudden Infant Death Syndrome (SIDS) and speech disorders reported with an initial onset of symptoms within 3 days following whole-cell pertussis and acellular pertussis vaccines among those residing in the US from 1997 to 1999. Controls were employed to evaluate potential biases in VAERS. Evaluations as to whether whole-cell and acellular vaccines were administered to populations of similar age and sex were undertaken because these factors might influence the study's results. Statistical increases were observed for all events examined following whole-cell pertussis vaccination in comparison to acellular pertussis vaccination, excepting cerebellar ataxia. Reporting biases were minimal in VAERS, and whole-cell and acellular pertussis vaccines were administered to populations of similar age and sex. Biologic mechanisms for the increased reactogenicity of whole-cell pertussis vaccines may stem from the fact that whole-cell pertussis vaccines contain 3,000 different proteins, whereas DTaP contains two to five proteins. Whole-cell pertussis vaccine contains known neurotoxins including: endotoxin, pertussis toxin and adenylate cyclase. Our results, and conclusions by the US Institute of Medicine, suggest an association between serious neurological disorders and whole-cell pertussis immunization. In light of the presence of a safer and at least equally efficacious acellular pertussis vaccine alternative, the Japanese and US switch to using acellular pertussis vaccine seems well justified. Other countries using whole-cell pertussis-containing vaccines should consider following suite in the near future.

  14. Combining N-body accretion simulations with partitioning experiments in a statistical model of terrestrial planet accretion and core formation

    NASA Astrophysics Data System (ADS)

    Fischer, R. A.; Ciesla, F.; Campbell, A. J.

    2014-12-01

    The terrestrial planets accreted in a series of increasingly large and violent collisions. Simultaneously, metallic cores segregated from their silicate mantles, acquiring their modern compositions through high pressure (P), high temperature (T) partitioning reactions. Here we present a model that couples these aspects of early planetary evolution, building on recent accretion simulations and experimental results. We have run 100 N-body simulations of terrestrial planet accretion, with Jupiter and Saturn on either circular (CJS) or eccentric (EJS) orbits, to gain insight into the statistics of this highly stochastic process (Fischer and Ciesla, 2014). An Earth (Mars) analogue forms in 84-92% (2-10%) of our simulations. We draw on our recent high P-T metal-silicate partitioning experiments of Ni, Co, V, Cr, Si, and O in a diamond anvil cell to 100 GPa and 5500 K. In our model, N-body simulations describe the delivery, masses, and original locations of planetary building blocks. As planets accrete, their core and mantle compositions are modified by high P-T reactions with each collision (Rubie et al., 2011). By utilizing a large number of N-body simulations, we obtain a statistical view and observe a wide range of outcomes. We use this model to predict the core compositions of Earth-like planets. For partial equilibration of the mantle at 50% of the core-mantle boundary (CMB) pressure, we find that their cores contain 6.9 ± 1.8 wt% Si and 4.8 ± 2.3 wt% O (Figure), with this uncertainty due entirely to variations in accretion history in our 100 simulations. This composition is consistent with the seismologically-inferred density of Earth's core, based on comparisons to high P-T equations of state (Fischer et al., 2011, 2014). Earth analogues experience 0.7 ± 0.1 or 0.9 ± 0.2 log units of oxidation during accretion in EJS or CJS simulations respectively, which is due to both the effects of high P-T partitioning and the temporal evolution of the Earth analogue

  15. Aqueous alteration on the parent bodies of carbonaceous chondrites: Computer simulations of late-stage oxidation

    NASA Technical Reports Server (NTRS)

    Bourcier, W. L.; Zolensky, Michael E.

    1991-01-01

    CI carbonaceous chondrites may be products of hydrous alteration of CV- or anhydrous CM-type materials. The CIs typically contain veins filled with carbonates and sulfates, probably indicating a period of late stage aqueous alteration under oxidizing conditions. To test this idea, computer simulations of aqueous alteration of CV- and CM-type carbonaceous were performed. Simulations were restricted to the oxidation of hydrous mineral assemblages produced in previous simulations in order to determine whether further reaction and oxidation results in the phyllosilicate, carbonate, sulfate and oxide vein assemblages typical of CI carbonaceous chondrites. Our simulations were performed at 1, 25, 100, and 150 C (the appropriate temperature range) for the CV and CM mineral assemblages and using the computer code EQ3/6.

  16. DSMC Simulations of Blunt Body Flows for Mars Entries: Mars Pathfinder and Mars Microprobe Capsules

    NASA Technical Reports Server (NTRS)

    Moss, James N.; Wilmoth, Richard G.; Price, Joseph M.

    1997-01-01

    The hypersonic transitional flow aerodynamics of the Mars Pathfinder and Mars Microprobe capsules are simulated with the direct simulation Monte Carlo method. Calculations of axial, normal, and static pitching coefficients were obtained over an angle of attack range comparable to actual flight requirements. Comparisons are made with modified Newtonian and free-molecular-flow calculations. Aerothermal results were also obtained for zero incidence entry conditions.

  17. Simulation of body force field effects on airfoil separation control and optimization of plasma actuator

    NASA Astrophysics Data System (ADS)

    Abdoli, A.; Mirzaee, I.; Anvari, A.; Purmahmod, N.

    2008-09-01

    Among all active flow control methods, EHD, MHD and EMHD are the only methods which operate on the basis of body force induction on flow field. The EHD plasma actuator is the proper method which has been used in various flow control applications recently. In this paper, the effects of different body force fields on different domains have been studied for separation control on NACA 0021 and the results have been discussed. The airflow velocity has been assumed to be 35 m s-1 at a post-stall angle of attack of 23°. Three different domains have been used around the airfoil to investigate body forces with different strengths and directions and those which give the best result in separation control have been obtained for each domain. It has been shown that the results could be used for optimizing the plasma actuator by manipulating its electrode configuration. Two non-dimensional numbers, Ab and Dc, have been obtained and validated by different applied body forces. These numbers have been defined for plasma actuators to show their efficiency in different applications.

  18. Monte Carlo simulation of radiation doses to human body exposed to heavy charged ion beams.

    NASA Astrophysics Data System (ADS)

    Gudowska, I.; Kopec, M.; Sobolevsky, N.

    Studies of heavy charged ion interactions with human organs are of importance for evaluation of biologically equivalent doses delivered to astronauts in long-term manned interplanetary missions and to patients undergoing radiation therapy Calculations of particle spectra energy deposition and the dose - LET distributions in tissues from primary particles and their secondaries are necessary for accurate evaluation of radiation doses to human body and the biological effects of heavy charged ions Computation methods using radiation transport codes are especially important in the prediction of radiation doses to astronauts since the dedicated experimental studies are in most cases impossible or strongly limited Calculations of the absorbed and effective doses in specific organs and tissues of human body due to irradiation by heavy charged ion beams were performed using the SHIELD-HIT 1 2 and MCNPX 3 Monte Carlo codes In these studies different ions of Z le 26 were transported through human body phantoms in the wide range of energies up to hundreds of MeV u Calculations with the MCNPX code were limited to ions of Z le 4 The mathematical anthropomorphical phantoms ADAM male and EVA female were applied in the evaluations with MCNPX whereas in the SHIELD-HIT calculations a simplified body phantom was used The track lengths differential in energy of the primary and secondary particles at different sites in the specific organs calculated by SHIELD-HIT and MCNPX are compared for proton and helium beams A careful analysis of the low- and

  19. Space Station Common Berthing Mechanism, a multi-body simulation application

    NASA Technical Reports Server (NTRS)

    Searle, Ian

    1993-01-01

    This paper discusses an application of multi-body dynamic analysis conducted at the Boeing Company in connection with the Space Station (SS) Common Berthing Mechanism (CBM). After introducing the hardware and analytical objectives we will focus on some of the day-to-day computational issues associated with this type of analysis.

  20. Numerical simulation of upstream disturbance on flows around a slender body

    NASA Technical Reports Server (NTRS)

    Degani, David; Tobak, Murray

    1993-01-01

    Numerical solutions of the thin-layer approximation of the compressible Navier-Stokes equations have been obtained for flows around an ogive-cylinder body with and without a small fixed disturbance placed upstream of the body tip. Locating the disturbance at positions in the flow field upstream of the tip provokes the same range of behavior of the asymmetric flow that was numerically produced earlier by use of a geometrical disturbance on the body tip. Results remain consistent with the presence of a convective instability mechanism, and demonstrate the potential for a precise mapping of the body's receptivity to fixed disturbances in the flow field. Numerical solutions were also obtained for the flow-field responses to impulsive upstream disturbances to determine whether there is a growing response to an asymmetric impulsive disturbance that is consistent with presence of a convective instability mechanism. Results for surface pressure are interpreted with the aid of a mathematical model. The model suggests that the observed growth of surface pressure gradient with time and distance along a ray in response to an asymmetnc impulsive disturbance is in accord with the solution of a Ginzberg-Landau equation, with distinguishing features of the solution being consistent with the convective instability mode of behavior.

  1. Nature’s Starships. II. Simulating the Synthesis of Amino Acids in Meteorite Parent Bodies

    NASA Astrophysics Data System (ADS)

    Cobb, Alyssa K.; Pudritz, Ralph E.; Pearce, Ben K. D.

    2015-08-01

    Carbonaceous chondrite meteorites are known for having high water and organic material contents, including amino acids. Here we address the origin of amino acids in the warm interiors of their parent bodies (planetesimals) within a few million years of their formation, and we connect this with the astrochemistry of their natal protostellar disks. We compute both the total amino acid abundance pattern and the relative frequencies of amino acids within the CM2 (e.g., Murchison) and CR2 chondrite subclasses based on Strecker reactions within these bodies. We match the relative frequencies to well within an order of magnitude among both CM2 and CR2 meteorites for parent body temperatures <200°C. These temperatures agree with 3D models of young planetesimal interiors. We find theoretical abundances of approximately 7 × 105 parts per billion, which is in agreement with the average observed abundance in CR2 meteorites of (4 ± 7) × 105, but an order of magnitude higher than the average observed abundance in CM2 meteorites of (2 ± 2) × 104. We find that the production of hydroxy acids could be favored over the production of amino acids within certain meteorite parent bodies (e.g., CI1, CM2) but not others (e.g., CR2). This could be due to the relatively lower NH3 abundances within CI1 and CM2 meteorite parent bodies, which leads to less amino acid synthesis. We also find that the water content in planetesimals is likely to be the main cause of variance between carbonaceous chondrites of the same subclass. We propose that amino acid abundances are primarily dependent on the ammonia and water content of planetesimals that are formed in chemically distinct regions within their natal protostellar disks.

  2. Monte Carlo simulation of the movement and detection efficiency of a whole-body counting system using a BOMAB phantom.

    PubMed

    Bento, Joana; Barros, Sílvia; Teles, Pedro; Neves, Maria; Gonçalves, Isabel; Corisco, José; Vaz, Pedro

    2012-03-01

    This study reports on the computational analysis and experimental calibration of the whole-body counting detection equipment at the Nuclear and Technological Institute (ITN) in Portugal. Two state-of-the-art Monte Carlo simulation programmes were used for this purpose: PENELOPE and MCNPX. This computational work was undertaken as part of a new set of experimental calibrations, which improved the quality standards of this study's WBC system. In these calibrations, a BOMAB phantom, one of the industry standards phantoms for WBC calibrations in internal dosimetry applications, was used. Both the BOMAB phantom and the detection system were accurately implemented in the Monte Carlo codes. The whole-body counter at ITN possesses a moving detector system, which poses a challenge for Monte Carlo simulations, as most codes only accept static configurations. The continuous detector movement was approximately described in the simulations by averaging several discrete positions of the detector throughout the movement. The computational efficiency values obtained with the two Monte Carlos codes have deviations of less than 3.2 %, and the obtained deviations between experimental and computational efficiencies are less than 5 %. This work contributes to demonstrate the great effectiveness of using computational tools for understanding the calibration of radiation detection systems used for in vivo monitoring.

  3. Thermal Gaussian molecular dynamics for quantum dynamics simulations of many-body systems: application to liquid para-hydrogen.

    PubMed

    Georgescu, Ionut; Deckman, Jason; Fredrickson, Laura J; Mandelshtam, Vladimir A

    2011-05-01

    A new method, here called thermal Gaussian molecular dynamics (TGMD), for simulating the dynamics of quantum many-body systems has recently been introduced [I. Georgescu and V. A. Mandelshtam, Phys. Rev. B 82, 094305 (2010)]. As in the centroid molecular dynamics (CMD), in TGMD the N-body quantum system is mapped to an N-body classical system. The associated both effective Hamiltonian and effective force are computed within the variational Gaussian wave-packet approximation. The TGMD is exact for the high-temperature limit, accurate for short times, and preserves the quantum canonical distribution. For a harmonic potential and any form of operator Â, it provides exact time correlation functions C(AB)(t) at least for the case of B, a linear combination of the position, x, and momentum, p, operators. While conceptually similar to CMD and other quantum molecular dynamics approaches, the great advantage of TGMD is its computational efficiency. We introduce the many-body implementation and demonstrate it on the benchmark problem of calculating the velocity time auto-correlation function for liquid para-hydrogen, using a system of up to N = 2592 particles. PMID:21548675

  4. A novel method of studying total body water content using a resonant cavity: experiments and numerical simulation.

    PubMed

    Robinson, Martin P; Clegg, Janet; Stone, Darren A

    2003-01-01

    A novel electromagnetic method of obtaining total body water is proposed, in which the water content is obtained from the dielectric properties as measured by a resonant perturbation technique. A screened room acts as a radio-frequency cavity, in our case resonating at 59 MHz, a frequency at which both real and imaginary parts of the complex permittivity of tissues are correlated to their moisture content. The presence of a human subject in the room leads to both a negative shift in the room's resonant frequency and a reduction in its Q-factor. We simulated the room and the body using the transmission line matrix (TLM) method, a computational electromagnetic code which models the problem in the time domain. Experiment and numerical model showed good agreement for two orientations of the subject. The sensitivity of the technique was investigated by measuring the response before and after the subject drank a small quantity of water, less than 2% of body mass. The resulting change in the resonant frequency was significant, and was also predicted by the numerical model. The proposed technique for studying body composition is simple, non-invasive and employs non-ionizing radio waves at low power.

  5. Simulating Non-Specific Influences of Body Posture and Temperature on Thigh-Bioimpedance Spectroscopy during Continuous Monitoring Applications

    NASA Astrophysics Data System (ADS)

    Ismail, A. H.; Leonhardt, S.

    2013-04-01

    Application of bioimpedance spectroscopy (BIS) for continuous monitoring of body fluid volumes is gaining considerable importance in personal health care. Unless laboratory conditions are applied, both whole-body or segmental BIS configurations are subject to nonspecific influences (e.g. temperature and change in body position) reducing the method's accuracy and reproducibility. In this work, a two-compartment mathematical model, which describes the thigh segment, has been adapted to simulate fluid and solute kinetics during change in body position or variation in skin temperature. The model is an improved version of our previous one offering a good tradeoff between accuracy and simplicity. It represents the kinetics of fluid redistribution, sodium-, potassium-, and protein-concentrations based on simple equations to predict the time course of BIS variations. Validity of the model was verified in five subjects (following a sequence of 7 min supine, 20 min standing, and 40 min supine). The output of the model may reduce possible influences on BIS by up to 80%.

  6. Physics-based Simulation of Human Posture Using 3D Whole Body Scanning Technology for Astronaut Space Suit Evaluation

    NASA Technical Reports Server (NTRS)

    Kim, Kyu-Jung

    2005-01-01

    Over the past few years high precision three-dimensional (3D) full body laser scanners have been developed to be used as a powerful anthropometry tool for quantification of the morphology of the human body. The full body scanner can quickly extract body characteristics in non-contact fashion. It is required for the Anthropometry and Biomechanics Facility (ABF) to have capabilities for kinematics simulation of a digital human at various postures whereas the laser scanner only allows capturing a single static posture at each time. During this summer fellowship period a theoretical study has been conducted to estimate an arbitrary posture with a series of example postures through finite element (FE) approximation and found that four-point isoparametric FE approximation would result in reasonable maximum position errors less than 5%. Subsequent pilot scan experiments demonstrated that a bead marker with a nominal size of 6 mm could be used as a marker for digitizing 3-D coordinates of anatomical landmarks for further kinematic analysis. Two sessions of human subject testing were conducted for reconstruction of an arbitrary postures from a set of example postures for each joint motion for the forearm/hand complex and the whole upper extremity.

  7. The evaluation of upper body muscle activity during the performance of external chest compressions in simulated hypogravity

    NASA Astrophysics Data System (ADS)

    Krygiel, Rebecca G.; Waye, Abigail B.; Baptista, Rafael Reimann; Heidner, Gustavo Sandri; Rehnberg, Lucas; Russomano, Thais

    2014-04-01

    BACKGROUND: This original study evaluated the electromyograph (EMG) activity of four upper body muscles: triceps brachii, erector spinae, upper rectus abdominis, and pectoralis major, while external chest compressions (ECCs) were performed in simulated Martian hypogravity using a Body Suspension Device, counterweight system, and standard full body cardiopulmonary resuscitation (CPR) mannequin. METHOD: 20 young, healthy male subjects were recruited. One hundred compressions divided into four sets, with roughly six seconds between each set to indicate 'ventilation', were performed within approximately a 1.5 minute protocol. Chest compression rate, depth and number were measured along with the subject's heart rate (HR) and rating of perceived exertion (RPE). RESULTS: All mean values were used in two-tailed t-tests using SPSS to compare +1 Gz values (control) versus simulated hypogravity values. The AHA (2005) compression standards were maintained in hypogravity. RPE and HR increased by 32% (p < 0.001) and 44% (p = 0.002), respectively, when ECCs were performed during Mars simulation, in comparison to +1 Gz. In hypogravity, the triceps brachii showed significantly less activity (p < 0.001) when compared with the other three muscles studied. The comparison of all the other muscles showed no difference at +1 Gz or in hypogravity. CONCLUSIONS: This study was among the first of its kind, however several limitations were faced which hopefully will not exist in future studies. Evaluation of a great number of muscles will allow space crews to focus on specific strengthening exercises within their current training regimes in case of a serious cardiac event in hypogravity.

  8. Simulation of millimeter-wave body images and its application to biometric recognition

    NASA Astrophysics Data System (ADS)

    Moreno-Moreno, Miriam; Fierrez, Julian; Vera-Rodriguez, Ruben; Parron, Josep

    2012-06-01

    One of the emerging applications of the millimeter-wave imaging technology is its use in biometric recognition. This is mainly due to some properties of the millimeter-waves such as their ability to penetrate through clothing and other occlusions, their low obtrusiveness when collecting the image and the fact that they are harmless to health. In this work we first describe the generation of a database comprising 1200 synthetic images at 94 GHz obtained from the body of 50 people. Then we extract a small set of distance-based features from each image and select the best feature subsets for person recognition using the SFFS feature selection algorithm. Finally these features are used in body geometry authentication obtaining promising results.

  9. Numerical simulation of vortical flow over an elliptical-body missile at high angles of attack

    NASA Technical Reports Server (NTRS)

    Newsome, R. N.; Adams, M. S.

    1986-01-01

    Numerical solutions to the Reynolds-averaged Navier-Stokes equations are given for the flow about an elliptical body missile (3:1 ellipse) at a Mach number of 2.5 and a unit Reynolds number of 6.56 x 10 to the 6th/m. At high angles of attack, the flow is dominated by large-scale free vortices which occur in the lee-side flow field due to crossflow boundary-layer separation. Emphasis is focused on the accurate prediction of the lee-side vortical flow. Solutions are presented for both symmetric and asymmetric (body rolled 45 deg) configurations at 10 deg and 20 deg angle of attack. The computed results are compared with experimental surface pressure coefficients and vapor-screen photographs. Excellent agreement is obtained in all cases.

  10. Evaluating acellular versus cellular perfusate composition during prolonged ex vivo lung perfusion after initial cold ischaemia for 24 hours.

    PubMed

    Becker, Simon; Steinmeyer, Jasmin; Avsar, Murat; Höffler, Klaus; Salman, Jawad; Haverich, Axel; Warnecke, Gregor; Ochs, Matthias; Schnapper, Anke

    2016-01-01

    Normothermic ex vivo lung perfusion (EVLP) has developed as a powerful technique to evaluate particularly marginal donor lungs prior to transplantation. In this study, acellular and cellular perfusate compositions were compared in an identical experimental setting as no consensus has been reached on a preferred technique yet. Porcine lungs underwent EVLP for 12 h on the basis of an acellular or a cellular perfusate composition after 24 h of cold ischaemia as defined organ stress. During perfusion, haemodynamic and respiratory parameters were monitored. After EVLP, the lung condition was assessed by light and transmission electron microscopy. Aerodynamic parameters did not show significant differences between groups and remained within the in vivo range during EVLP. Mean oxygenation indices were 491 ± 39 in the acellular group and 513 ± 53 in the cellular group. Groups only differed significantly in terms of higher pulmonary artery pressure and vascular resistance in the cellular group. Lung histology and ultrastructure were largely well preserved after prolonged EVLP and showed only minor structural alterations which were similarly present in both groups. Prolonged acellular and cellular EVLP for 12 h are both feasible with lungs prechallenged by ischaemic organ stress. Physiological and ultrastructural analysis showed no superiority of either acellular or cellular perfusate composition.

  11. Pressure-based high order simulations of vortex shedding behind a stationary and oscillating blunt body

    SciTech Connect

    Hung, T.C.; Wang, S.K.; Tsai, F.P.

    1996-12-01

    A pressure-based high-order upwind scheme using PISO algorithm was applied to the investigation of the vortex shedding behind a vertical plate or a circular cylinder. For stationary plate and cylinder, the vortex shedding frequency and its corresponding Strouhnal number were predicted to be in a good agreement with the data reported in literature. Once the blunt body is set to move in an oscillating mode, the vibration tends to have a synchronization effect on the vortex shedding frequency. The pressure fluctuations as well as the vortical strength were predicted to be strongly dependent on the orientation of the body motion. A body with a streamwise vibration will induce higher pressure fluctuations of the wake, presumably due to a larger relative velocity fluctuation. The transverse vibration yields relatively lower pressure fluctuations and occasionally generates unstable pattern with three vortices formed per cycle of vibration. Understanding such a complicated fluid-structure interaction process is of vital importance to prevent destructive vibrations in the design of many industrial devices including heat exchangers, offshore platforms, skyscrapers, slender aircraft wings, and many others.

  12. Corrosion behavior of chromium and oxygen plasma-modified magnesium in sulfate solution and simulated body fluid

    NASA Astrophysics Data System (ADS)

    Xu, Ruizhen; Wu, Guosong; Yang, Xiongbo; Zhang, Xuming; Wu, Zhengwei; Sun, Guangyong; Li, Guangyao; Chu, Paul K.

    2012-08-01

    Because of the unique mechanical properties and biocompatibility, magnesium and its alloys have large potential as lightweight structural materials in the industry in addition to being naturally degradable and resorbable biomaterials. However, their corrosion resistance is usually inadequate especially in an aqueous environment. In this work, pure magnesium is implanted with chromium and oxygen by plasma immersion ion implantation (PIII) and the corrosion behavior is systematically investigated in simulated body fluid and sodium sulfate solution by polarization tests and electrochemical impedance spectroscopy. Our results reveal that chromium and oxygen ion-implanted magnesium have a lower corrosion rate and exhibit less pitting corrosion in the two solutions.

  13. A whole body postural loading simulation and assessment model for workplace analysis and design.

    PubMed

    Rebelo, Francisco; Correia da Silva, K; Karwowski, Waldemar

    2012-01-01

    This study reports on the development and validation of a new computer model for simulating human postures at work, and assessing the reaction forces and bending moments in 43 human articulation joints. The proposed model estimates the intradiscal pressure in the vertebral column in response to external loading forces encountered during human interactions with work objects or processes. The model was implemented in a self-contained interactive software package. The simulation results compare favorably with the reported experimental data, and provide reasonable confidence in the quality of the model. Its characteristics and its applications in evaluating physical task performance are also discussed. PMID:23294655

  14. Computer Simulation Study of Human Locomotion with a Three-Dimensional Entire-Body Neuro-Musculo-Skeletal Model

    NASA Astrophysics Data System (ADS)

    Hase, Kazunori; Obinata, Goro

    It is essential for the biomechanical study of human walking motion to consider not only in vivo mechanical load and energy efficiency but also aspects of motor control such as walking stability. In this study, walking stability was investigated using a three-dimensional entire-body neuro-musculo-skeletal model in the computer simulation. In the computational experiments, imaginary constraints, such as no muscular system, were set in the neuro-musculo-skeletal model to investigate their influence on walking stability. The neuronal parameters were adjusted using numerical search techniques in order to adapt walking patterns to constraints on the neuro-musculo-skeletal system. Simulation results revealed that the model of the normal neuro-musculo-skeletal system yielded a higher stability than the imaginary models. Unstable walking by a model with a time delay in the neuronal system suggested significant unknown mechanisms which stabilized walking patterns that have been neglected in previous studies.

  15. Changes of body fluid and hematology in toad and their rehabilitation following intermittent exposure to simulated high altitude

    NASA Astrophysics Data System (ADS)

    Biswas, H. M.; Boral, M. C.

    1986-06-01

    Three groups of adult male toads were exposed intermittently in a decompression chamber for a daily period of 4 and 8 hours at a time for 6 consecutive days to an “altitude” of 12,000; 18,000 and 24,000 feet (3658; 5486; 7315 m) respectively. Most of the exposed animals were sacrificed immediately after the last exposure, but only a few animals experiencing 8 hours of exposure were sacrificed after a further 16 hours of exposure at normal atmospheric pressure. Eight hours of daily exposure for 6 days causes a decrease of body fluids and an increase of hematological parameters in all the altitude exposed animals compared with to the changes noted in the animals having 4 hours of daily exposure for 6 days at the same altitude levels. The animals that were exposed to pressures equivalent to altitudes of 12,000 and 18,000 feet daily for 8 hours were found to return nearly to their normal body fluids and hematological balance after 16 hours of exposure to normal atmospheric pressure, whereas the animals exposed for a similar period at an equivalent 24,000 feet failed to get back their normal balance of body fluids and hematology after 16 hours of exposure at normal atmospheric pressure. The present experiment shows that the body weight loss and changes of body fluid and hematological parameters in the toad after exposure to simulated high altitude are due not only to dehydration, but suggest that hypoxia may also have a role.

  16. A simulation of a bluff-body stabilized turbulent premixed flame using LES-PDF

    NASA Astrophysics Data System (ADS)

    Kim, Jeonglae; Pope, Stephen

    2013-11-01

    A turbulent premixed flame stabilized by a triangular cylinder as a flame-holder is simulated. The computational condition matches the Volvo experiments (Sjunnesson et al. 1992). Propane is premixed at a fuel lean condition of ϕ = 0 . 65 . For this reactive simulation, LES-PDF formulation is used, similar to Yang et al. (2012). The evolution of Lagrangian particles is simulated by solving stochastic differential equations modeling transport of the composition PDF. Mixing is modeled by the modified IEM model (Viswanathan et al. 2011). Chemical reactions are calculated by ISAT and for the good load balancing, PURAN distribution of ISAT tables is applied (Hiremath et al. 2012). To calculate resolved density, the two-way coupling (Popov & Pope 2013) is applied, solving a transport equation of resolved specific volume to reduce statistical noise. A baseline calculation shows a good agreement with the experimental measurements in turbulence statistics, temperature, and minor species mass fractions. Chemical reaction does not significantly contribute to the overall computational cost, in contrast to non-premixed flame simulations (Hiremath et al. 2013), presumably due to the restricted manifold of the purely premixed flame in the composition space.

  17. N-BODY SIMULATIONS OF SATELLITE FORMATION AROUND GIANT PLANETS: ORIGIN OF ORBITAL CONFIGURATION OF THE GALILEAN MOONS

    SciTech Connect

    Ogihara, Masahiro; Ida, Shigeru E-mail: ida@geo.titech.ac.jp

    2012-07-01

    As the number of discovered extrasolar planets has been increasing, diversity of planetary systems requires studies of new formation scenarios. It is important to study satellite formation in circumplanetary disks, which is often viewed as analogous to formation of rocky planets in protoplanetary disks. We investigated satellite formation from satellitesimals around giant planets through N-body simulations that include gravitational interactions with a circumplanetary gas disk. Our main aim is to reproduce the observable properties of the Galilean satellites around Jupiter through numerical simulations, as previous N-body simulations have not explained the origin of the resonant configuration. We performed accretion simulations based on the work of Sasaki et al., in which an inner cavity is added to the model of Canup and Ward. We found that several satellites are formed and captured in mutual mean motion resonances outside the disk inner edge and are stable after rapid disk gas dissipation, which explains the characteristics of the Galilean satellites. In addition, owing to the existence of the disk edge, a radial compositional gradient of the Galilean satellites can also be reproduced. An additional objective of this study is to discuss orbital properties of formed satellites for a wide range of conditions by considering large uncertainties in model parameters. Through numerical experiments and semianalytical arguments, we determined that if the inner edge of a disk is introduced, a Galilean-like configuration in which several satellites are captured into a 2:1 resonance outside the disk inner cavity is almost universal. In fact, such a configuration is produced even for a massive disk {approx}> 10{sup 4} g cm{sup -2} and rapid type I migration. This result implies the inevitability of a Galilean satellite formation in addition to providing theoretical predictions for extrasolar satellites. That is, we can predict a substantial number of exomoon systems in the 2

  18. New VHP-Female v. 2.0 full-body computational phantom and its performance metrics using FEM simulator ANSYS HFSS.

    PubMed

    Yanamadala, Janakinadh; Noetscher, Gregory M; Rathi, Vishal K; Maliye, Saili; Win, Htay A; Tran, Anh L; Jackson, Xavier J; Htet, Aung T; Kozlov, Mikhail; Nazarian, Ara; Louie, Sara; Makarov, Sergey N

    2015-01-01

    Simulation of the electromagnetic response of the human body relies heavily upon efficient computational models or phantoms. The first objective of this paper is to present a new platform-independent full-body electromagnetic computational model (computational phantom), the Visible Human Project(®) (VHP)-Female v. 2.0 and to describe its distinct features. The second objective is to report phantom simulation performance metrics using the commercial FEM electromagnetic solver ANSYS HFSS.

  19. Evolution and statistics of non-sphericity of dark matter halos from cosmological N-body simulation

    NASA Astrophysics Data System (ADS)

    Suto, Daichi; Kitayama, Tetsu; Nishimichi, Takahiro; Sasaki, Shin; Suto, Yasushi

    2016-10-01

    We revisit the non-sphericity of cluster-mass-scale halos from cosmological N-body simulation on the basis of triaxial modeling. In order to understand the difference between the simulation results and the conventional ellipsoidal collapse model (EC), we first consider the evolution of individual simulated halos. The major difference between EC and the simulation becomes appreciable after the turnaround epoch. Moreover, it is sensitive to the individual evolution history of each halo. Despite such strong dependence on individual halos, the resulting non-sphericity of halos exhibits weak but robust mass dependence in a statistical fashion; massive halos are more spherical up to the turnaround, but gradually become less spherical by z = 0. This is clearly inconsistent with the EC prediction: massive halos are usually more spherical. In addition, at z = 0, inner regions of the simulated halos are less spherical than outer regions; that is, the density distribution inside the halos is highly inhomogeneous and therefore not self-similar (concentric ellipsoids with the same axis ratio and orientation). This is also inconsistent with the homogeneous density distribution that is commonly assumed in EC. Since most of previous fitting formulae for the probability distribution function (PDF) of the axis ratio of triaxial ellipsoids have been constructed under the self-similarity assumption, they are not accurate. Indeed, we compute the PDF of the projected axis ratio a1/a2 directly from the simulation data without the self-similarity assumption, and find that it is very sensitive to the assumption. The latter needs to be carefully taken into account in direct comparison with observations, and therefore we provide an empirical fitting formula for the PDF of a1/a2. Our preliminary analysis suggests that the derived PDF of a1/a2 roughly agrees with the current weak-lensing observations. More importantly, the present results will be useful for future exploration of the non

  20. Mathematical Simulation of the Extraction of a Blending Agent from Cylindrical Bodies in the Semicontinuous Regime

    NASA Astrophysics Data System (ADS)

    Rudobashta, S. P.; Kosheleva, M. K.; Kartashov, É. M.

    2016-05-01

    A problem of the kinetics of extraction of a blending agent from cylindrical bodies in an apparatus of semicontinuous action (periodic for the solid phase and continuous for the liquid phase) in which the liquid phase is completely mixed was formulated and solved analytically. The kinetics of the indicated process at different specific flow rates of the liquid phase was analyzed with the use of a numerical method. Recommendations on the use of the solution obtained for calculating the kinetics of extraction of technological contaminants from textile materials in the process of their flushing are given

  1. A simulated insect diet as a water source for quail: effects on body mass and reproduction.

    PubMed

    Giuliano, W M; Lutz, R S; Patiño, R

    1995-06-01

    Compared with control birds receiving ad libitum free-water, the total water intake of male and female northern bobwhite declined when only mealworms were available as a source of water. Male northern bobwhite sustained tissue mass and reproductive function with mealworms as their only source of water. Female northern bobwhite could not sustain body, ovary, and oviduct mass, and rate of egg production with mealworms as their only source of water. We suggest that, without free-water, breeding females require a diet with a water:dry matter ratio of greater than 1:1.29 (> 44% water).

  2. Numerical simulation of turbulent coherent structures of flows past a bluff body

    NASA Astrophysics Data System (ADS)

    Yan, Chuanjun; Xu, Chenggang; Zhu, Huiling; Tan, Ming; Wang, Hongchi

    The model used to arrive at the present numerical results of unsteady, two-dimensional turbulent reacting flow past a bluff body is based on Chorin's (1973) random vortex method and a simple line interface calculation for a flame propagation algorithm. A triangular prism is used as a flame holder, and solutions for both reacting and nonreacting flows are obtained. The numerical results encompass the vorticity field, the average velocity field, turbulence statistics, flame contours, and the concentration field, revealing a Karman vortex street coherent structure and illuminating the processes of ignition, stabilization, and propagation of the premixed flame.

  3. Numerical simulation of steady supersonic flow over an ogive-cylinder-boattail body

    NASA Technical Reports Server (NTRS)

    Schiff, L. B.; Sturek, W. B.

    1980-01-01

    A recently reported parabolized Navier-Stokes code has been employed to compute the supersonic flow field surrounding an ogive-cylinder-boattail body at incidence. The computations were performed for flow conditions where an extensive series of experimental surface pressure and turbulent boundary-layer profile measurements had been obtained. Comparison between the computational results and experimental measurements for angles of attack up to 6 deg show excellent agreement. At angles greater than 6 deg discrepancies are observed which are tentatively attributed to three-dimensional turbulence modeling errors.

  4. Numerical simulation of vortex unsteadiness on a slender body at high incidence

    NASA Technical Reports Server (NTRS)

    Degani, David

    1992-01-01

    Numerical results obtained with the present3D thin-layer Navier-Stokes solver are shown to qualitatively follow experimental results. They also indicate the existence of at least two main frequencies on an ogive cylinder at 40 and 60 deg angles-of-attack: (1) a low frequency associated with fluctuations of the primary vortices, and leads to vortex shedding, and (2) a high frequency associated with shear-layer fluctuations that are concentrated in several small areas above the leeward side of the body's cylindrical portion.

  5. Multiple-body simulation with emphasis on integrated Space Shuttle vehicle

    NASA Technical Reports Server (NTRS)

    Chiu, Ing-Tsau

    1993-01-01

    The program to obtain intergrid communications - Pegasus - was enhanced to make better use of computing resources. Periodic block tridiagonal and penta-diagonal diagonal routines in OVERFLOW were modified to use a better algorithm to speed up the calculation for grids with periodic boundary conditions. Several programs were added to collar grid tools and a user friendly shell script was developed to help users generate collar grids. User interface for HYPGEN was modified to cope with the changes in HYPGEN. ET/SRB attach hardware grids were added to the computational model for the space shuttle and is currently incorporated into the refined shuttle model jointly developed at Johnson Space Center and Ames Research Center. Flow simulation for the integrated space shuttle vehicle at flight Reynolds number was carried out and compared with flight data as well as the earlier simulation for wind tunnel Reynolds number.

  6. Quantitative analysis of voids in percolating structures in two-dimensional N-body simulations

    NASA Technical Reports Server (NTRS)

    Harrington, Patrick M.; Melott, Adrian L.; Shandarin, Sergei F.

    1993-01-01

    We present in this paper a quantitative method for defining void size in large-scale structure based on percolation threshold density. Beginning with two-dimensional gravitational clustering simulations smoothed to the threshold of nonlinearity, we perform percolation analysis to determine the large scale structure. The resulting objective definition of voids has a natural scaling property, is topologically interesting, and can be applied immediately to redshift surveys.

  7. Dental ceramics coated with bioactive glass: Surface changes after exposure in a simulated body fluid under static and dynamic conditions

    NASA Astrophysics Data System (ADS)

    Papadopoulou, L.; Kontonasaki, E.; Zorba, T.; Chatzistavrou, X.; Pavlidou, E.; Paraskevopoulos, K.; Sklavounos, S.; Koidis, P.

    2003-07-01

    Bioactive materials develop a strong bond with living tissues through a carbonate-containing hydroxyapatite layer, similar to that of bone. The fabrication of a thin bioactive glass coating on dental ceramics used in metal-ceramic restorations, could provide a bioactive surface, which in combination with a tissue regenerative technique could lead to periodontal tissues attachment. The aim of this study was the in vitro investigation of the surface structure changes of dental ceramics used in metal-ceramic restorations, coated with a bioactive glass heat-treated at 950 °C, after exposure in a simulated body fluid (SBF) under two different soaking conditions. Coating of dental ceramics with a bioactive glass resulted in the formation of a stable and well bonded with the ceramic substrate thin layer. The growth of a well-attached carbonate apatite layer on their surface after immersion in a simulated body fluid is well evidenced under both experimental conditions, although in static environment the rate of apatite growth is constant and the grown layers seem to be more dense and compact compared with the respective layers observed on specimens under dynamic conditions.

  8. DYNAMICAL EVOLUTION OF THE YOUNG STARS IN THE GALACTIC CENTER: N-BODY SIMULATIONS OF THE S-STARS

    SciTech Connect

    Perets, Hagai B.; Kupi, Gabor; Alexander, Tal; Gualandris, Alessia; Merritt, David

    2009-09-10

    We use Newtonian N-body simulations to study the evolution of the orbital eccentricities of stars deposited near ({approx}<0.05 pc) the Milky Way massive black hole (MBH), starting from initial conditions motivated by two competing models for their origin: formation in a disk followed by inward migration and exchange interactions involving a binary star. The first model predicts modest eccentricities, lower than those observed in the S-star cluster, while the second model predicts higher eccentricities than observed. The Newtonian N-body simulations include a dense cluster of 10 M{sub sun} stellar-mass black holes (SBHs), expected to accumulate near the MBH by mass segregation. Perturbations from the SBHs tend to randomize the stellar orbits, partially erasing the dynamical signatures of their origin. The eccentricities of the initially highly eccentric stars evolve, in 20 Myr (the S-star lifespan), to a distribution that is consistent with the observed eccentricity distribution. In contrast, the eccentricities of the initially more circular orbits fail to evolve to the observed values in 20 Myr, arguing against the disk migration scenario. We find that 20%-30% of the S-stars are tidally disrupted by the MBH over their lifetimes, and that the S-stars are not likely to be ejected as hypervelocity stars outside the central 0.05 pc by close encounters with SBHs.

  9. Cross-sectional neck response of a total human body FE model during simulated frontal and side automobile impacts.

    PubMed

    White, Nicholas A; Moreno, Daniel P; Gayzik, F Scott; Stitzel, Joel D

    2015-01-01

    Human body finite element (FE) models are beginning to play a more prevalent role in the advancement of automotive safety. A methodology has been developed to evaluate neck response at multiple levels in a human body FE model during simulated automotive impacts. Three different impact scenarios were simulated: a frontal impact of a belted driver with airbag deployment, a frontal impact of a belted passenger without airbag deployment and an unbelted side impact sled test. Cross sections were created at each vertebral level of the cervical spine to calculate the force and moment contributions of different anatomical components of the neck. Adjacent level axial force ratios varied between 0.74 and 1.11 and adjacent level bending moment ratios between 0.55 and 1.15. The present technique is ideal for comparing neck forces and moments to existing injury threshold values, calculating injury criteria and for better understanding the biomechanical mechanisms of neck injury and load sharing during sub-injurious and injurious loading.

  10. Simulation-based joint estimation of body deformation and elasticity parameters for medical image analysis.

    PubMed

    Lee, Huai-Ping; Foskey, Mark; Niethammer, Marc; Krajcevski, Pavel; Lin, Ming

    2012-11-01

    Estimation of tissue stiffness is an important means of noninvasive cancer detection. Existing elasticity reconstruction methods usually depend on a dense displacement field (inferred from ultrasound orMR images) and known external forces.Many imaging modalities, however, cannot provide details within an organ and therefore cannot provide such a displacement field. Furthermore, force exertion and measurement can be difficult for some internal organs, making boundary forces another missing parameter. We propose a general method for estimating elasticity and boundary forces automatically using an iterative optimization framework, given the desired (target) output surface. During the optimization, the input model is deformed by the simulator, and an objective function based on the distance between the deformed surface and the target surface is minimized numerically. The optimization framework does not depend on a particular simulation method and is therefore suitable for different physical models. We show a positive correlation between clinical prostate cancer stage (a clinical measure of severity) and the recovered elasticity of the organ. Since the surface correspondence is established, our method also provides a non-rigid image registration, where the quality of the deformation fields is guaranteed, as they are computed using a physics-based simulation.

  11. Florid pustular dermatitis of breast: A case report on a unusual complication from acellular dermal matrix use

    PubMed Central

    James, Justin; Jackson, Lee; Saunders, Christobel

    2016-01-01

    Introduction Idiopathic erythematous reaction of the breast (Red breast syndrome) is a known complication following breast reconstruction with acellular dermal matrix. However pustular dermatitis like presentation is not previously known. Presentation of case We present a 42-year-old lady who developed bilateral pustular dermatitis like appearance following breast reconstruction with acellular dermal matrix slings. Though surgical washout was done, both expanders and flex HD could be preserved. Discussion Acellular dermal matrix use is the only possible explanation for such a presentation and this can be considered a variant of red breast syndrome. Conclusion Pustular dermatitis like presentation can be associated with acelluar dermal matrix use and should be considered in similar clinical presentations, since this can avoid unnecessary surgical procedures. PMID:27058152

  12. Bio-Templated Growth of Bone Minerals from Modified Simulated Body Fluid on Nanofibrous Decellularized Natural Tissues.

    PubMed

    Yang, Mingying; Wang, Jie; Zhu, Ye; Mao, Chuanbin

    2016-04-01

    Small intestine submucosal (SIS) membrane used in this study is a decellularized, naturally occurring nanofibrous scaffold derived from a submucosal layer of porcine small intestine. It is predominantly composed of type I collagen fibers. Here we studied the bio-templated growth of hydroxylapatite (HAP) bone minerals on the SIS membrane from a modified simulated body fluid (1.5 SBF) at the body temperature, namely, under a near-physiological condition, in order to evaluate its bone bioactivity, the capability of the membrane in bonding with bone tissue once implanted in vivo. Minute HAP crystals were successfully nucleated on the SIS membranes from 1.5 SBF at the body temperature. The crystals were preferentially nucleated along the collagen fibers constituting the SIS membranes. HAP was the major crystalline mineral phase formed during the whole period of time and a minor crystalline phase of tricalcium phosphate (TCP) appeared after the membranes were incubated for 96 h. We also found that the mineralization for 8 h most significantly promoted the osteogenic differentiation of rat mesenchymal stem cells (MSCs) by evaluating the formation of osteogenic markers in MSCs including alkaline phosphatase (early stage marker) as well as osteocalcin and osteopontin (late stage markers). Hence, SIS membranes show excellent bone bioactivity and once mineralized, can significantly promote the osteogenic differentiation of MSCs. PMID:27301201

  13. Molecular dynamics simulation of delamination of a stiff, body-centered-cubic crystalline film from a compliant Si substrate

    NASA Astrophysics Data System (ADS)

    Hale, L. M.; Zhou, X. W.; Zimmerman, J. A.; Moody, N. R.; Ballarini, R.; Gerberich, W. W.

    2009-10-01

    Compliant substrate technology offers an effective approach to grow high-quality multilayered films, of importance to microelectronics and microelectromechanical systems devices. By using a thin, soft substrate to relieve the mismatch strain of an epitaxial film, the critical thickness of misfit dislocation formation in the overlayer is effectively increased. Experiments have indicated that stiff films deposited onto Si substrates can delaminate at the interface. However, the atomic mechanisms of the deformation and the fracture of the films have not been well studied. Here, we have applied molecular dynamics simulations to study the delamination of a stiff body-centered-cubic crystalline film from a compliant Si substrate due to tensile loading. The observed mechanical behavior is shown to be relatively independent of small changes in temperature, loading rate, and system size. Fracture occurs at the interface between the two materials resulting in nearly atomically clean surfaces. Dislocations are seen to nucleate in the body-centered-cubic film prior to delamination. At higher strains, a phase change to a face centered cubic is observed within the body-centered-cubic film, facilitating extensive dislocation growth and interaction. The various defects that form prior to fracture are discussed and related to the mechanical properties of the system.

  14. Quantum Drude oscillator model of atoms and molecules: Many-body polarization and dispersion interactions for atomistic simulation

    NASA Astrophysics Data System (ADS)

    Jones, Andrew P.; Crain, Jason; Sokhan, Vlad P.; Whitfield, Troy W.; Martyna, Glenn J.

    2013-04-01

    Treating both many-body polarization and dispersion interactions is now recognized as a key element in achieving the level of atomistic modeling required to reveal novel physics in complex systems. The quantum Drude oscillator (QDO), a Gaussian-based, coarse grained electronic structure model, captures both many-body polarization and dispersion and has linear scale computational complexity with system size, hence it is a leading candidate next-generation simulation method. Here, we investigate the extent to which the QDO treatment reproduces the desired long-range atomic and molecular properties. We present closed form expressions for leading order polarizabilities and dispersion coefficients and derive invariant (parameter-free) scaling relationships among multipole polarizability and many-body dispersion coefficients that arise due to the Gaussian nature of the model. We show that these “combining rules” hold to within a few percent for noble gas atoms, alkali metals, and simple (first-row hydride) molecules such as water; this is consistent with the surprising success that models with underlying Gaussian statistics often exhibit in physics. We present a diagrammatic Jastrow-type perturbation theory tailored to the QDO model that serves to illustrate the rich types of responses that the QDO approach engenders. QDO models for neon, argon, krypton, and xenon, designed to reproduce gas phase properties, are constructed and their condensed phase properties explored via linear scale diffusion Monte Carlo (DMC) and path integral molecular dynamics (PIMD) simulations. Good agreement with experimental data for structure, cohesive energy, and bulk modulus is found, demonstrating a degree of transferability that cannot be achieved using current empirical models or fully ab initio descriptions.

  15. Adipose tissue regeneration in vivo using micronized acellular allogenic dermis as an injectable scaffold.

    PubMed

    Lee, Hee Young; Yang, Hyun Jin; Rhie, Jong Won; Han, Ki Talk

    2014-10-01

    Over the past few years, the clinical use of injectable artificial materials in plastic surgery has increased. In addition, autologous lipoimplantation is being performed for volume replacement of soft tissue for aesthetic purposes. In this study, acellular allogenic dermis was utilized as a scaffold for the culturing of preadipocytes, confirming the possibility of three-dimensional proliferation of progenitor cells, the eventual differentiation of stromal cells in adipose tissue into the adipocytes, and the in vivo implantation of such adipocytes to form fat tissue. Preadipocytes, recently called ASCs (adipose tissue-derived stromal/stem cells), were cultured in acellular allogenic dermis, successfully attached to the dermal particles in a three-dimensional structure, and proliferated, differentiated, and eventually formed a cluster. For the in vivo implantation, four groups were formed: the first group was cultured within the dermal scaffold for 24 h before implantation (24-h preconditioned group), the second group was induced for differentiation for 10 days before implantation (10-day preconditioned group), the third group was implanted immediately after cell propagation (nonpreconditioned group), and the control group was implanted with only dermal scaffold. In vivo implanted preadipocytes showed great differentiation into adipocytes within the dermal scaffolds. Also, the 10-day preconditioned group showed a greater volume of fat tissue compared to the 24-h preconditioned group. From these results, we confirmed that after a three-dimensional culture in acellular allogenic dermis, implanted preadipocytes formed a greater amount of fat tissue and that this could be a possible effective method for future soft tissue restoration.

  16. Reconstruction of a Recurrent First Dorsal Web Space Defect using Acellular Dermis

    PubMed Central

    Buck, Donald W.; Kloeters, Oliver; Eo, SuRak; Jones, Neil F.

    2007-01-01

    Oncologic defects of the hand can be problematic for the reconstructive surgeon. These defects may require a delay in definitive coverage until clear margins of resection can be obtained, which can result in a prolonged period of painful dressing changes and increased risk of soft-tissue infection. In addition, reconstructive options for oncologic defects are often limited to skin grafting, which can yield functional deficits secondary to contracted healing. Currently, there is no definitive method for preventing skin graft contracture; however, acellular dermis has been proposed as a biomechanical scaffold to enhance subsequent skin graft healing and slow this functionally debilitating process. Here, we present a patient with recurrent melanoma of the first dorsal web space. After re-resection of the melanoma, the 11 cm × 5 cm defect was reconstructed using acellular dermis as temporary coverage to allow ample time for permanent section results. Ten days later, after confirming negative margins of resection, a split-thickness skin graft (STSG) was applied over the vascularized neo-dermis. Follow-up clinical examination and the Disabilities of the Arm, Shoulder, and Hand (DASH) questionnaires were used to assess outcome. At 7 months, the patient had no recurrence of melanoma and a DASH functional reduction of only 6.9%. After approximately 18 months, the patient’s wounds had healed with excellent cosmetic and functional results, without any evidence of a web space contracture. These observations suggest that acellular dermis is a useful adjunct for wound coverage of the hand, particularly in areas of functional importance, such as the first dorsal web space. PMID:18780060

  17. Coloring linens with excimer lasers to simulate the body image of the Turin Shroud

    NASA Astrophysics Data System (ADS)

    Baldacchini, Giuseppe; di Lazzaro, Paolo; Murra, Daniele; Fanti, Giulio

    2008-03-01

    The body image of the Turin Shroud has not yet been explained by traditional science; so a great interest in a possible mechanism of image formation still exists. We present preliminary results of excimer laser irradiation (wavelength of 308 nm) of a raw linen fabric and of a linen cloth. The permanent coloration of both linens is a threshold effect of the laser beam intensity, and it can be achieved only in a narrow range of irradiation parameters, which are strongly dependent on the pulse width and time sequence of laser shots. We also obtained the first direct evidence of latent images impressed on linen that appear in a relatively long period (one year) after laser irradiation that at first did not generate a clear image. The results are compared with the characteristics of the Turin Shroud, reflecting the possibility that a burst of directional ultraviolet radiation may have played a role in the formation of the Shroud image.

  18. Many-body localization in a quantum simulator with programmable random disorder

    NASA Astrophysics Data System (ADS)

    Smith, J.; Lee, A.; Richerme, P.; Neyenhuis, B.; Hess, P. W.; Hauke, P.; Heyl, M.; Huse, D. A.; Monroe, C.

    2016-10-01

    When a system thermalizes it loses all memory of its initial conditions. Even within a closed quantum system, subsystems usually thermalize using the rest of the system as a heat bath. Exceptions to quantum thermalization have been observed, but typically require inherent symmetries or noninteracting particles in the presence of static disorder. However, for strong interactions and high excitation energy there are cases, known as many-body localization (MBL), where disordered quantum systems can fail to thermalize. We experimentally generate MBL states by applying an Ising Hamiltonian with long-range interactions and programmable random disorder to ten spins initialized far from equilibrium. Using experimental and numerical methods we observe the essential signatures of MBL: initial-state memory retention, Poissonian distributed energy level spacings, and evidence of long-time entanglement growth. Our platform can be scaled to more spins, where a detailed modelling of MBL becomes impossible.

  19. Navier-Stokes simulation of rotor-body flowfield in hover using overset grids

    NASA Technical Reports Server (NTRS)

    Srinivasan, G. R.; Ahmad, J. U.

    1993-01-01

    A free-wake Navier-Stokes numerical scheme and multiple Chimera overset grids have been utilized for calculating the quasi-steady hovering flowfield of a Boeing-360 rotor mounted on an axisymmetric whirl-tower. The entire geometry of this rotor-body configuration is gridded-up with eleven different overset grids. The composite grid has 1.3 million grid points for the entire flow domain. The numerical results, obtained using coarse grids and a rigid rotor assumption, show a thrust value that is within 5% of the experimental value at a flow condition of M(sub tip) = 0.63, Theta(sub c) = 8 deg, and Re = 2.5 x 10(exp 6). The numerical method thus demonstrates the feasibility of using a multi-block scheme for calculating the flowfields of complex configurations consisting of rotating and non-rotating components.

  20. Numerical simulation of vortex unsteadiness on slender bodies of revolution at large incidence

    NASA Technical Reports Server (NTRS)

    Schiff, Lewis B.; Degani, David; Gavali, Sharad

    1989-01-01

    Time-accurate, fine-grid Navier-Stokes solutions were obtained for flow over a slender ogive-cylinder body of revolution at angles of attack ranging from 10 deg to 40 deg. The results indicate the progressive growth of crossflow separation and the development of the leeward side vortex pattern with increasing incidence. The computed flows show good agreement with experimental measurements. As the angle of attack was increased, the flows become less damped, and at 40 deg a nonsteady flow exhibiting self-sustained fluctuations was observed. The nonsteadiness was linked to the presence of small-scale three-dimensional vortices moving along the primary surfaces of crossflow separation. The behavior of the fluctuations with incidence parallels the trend observed in experiments.

  1. Numerical simulation of separated and vortical flows on bodies at large angles of attack

    NASA Technical Reports Server (NTRS)

    Schiff, Lewis B.; Degani, David; Cummings, Russell M.

    1989-01-01

    Navier-Stokes computations were carried out for high-angle-of-attack flow about bodies of revolution in supersonic and subsonic flow. Numerical and physical factors affecting flow predictions are discussed. Accurate prediction of the complex three-dimensional separated flow is found to depend on using grids sufficiently fine to resolve the details of both the viscous boundary layer and the off-surface separated flow structures, and, for turbulent flow cases, use of an eddy-viscosity turbulence model which accounts for the leeward vortical flow structures. An example of high-incidence flow computed about a more complex geometry, the F-18 fighter fuselage forebody and leading edge extension, is also presented.

  2. Adjuvant neurotrophic factors in peripheral nerve repair with chondroitin sulfate proteoglycan-reduced acellular nerve allografts

    PubMed Central

    Boyer, Richard B.; Sexton, Kevin W.; Rodriguez-Feo, Charles L.; Nookala, Ratnam; Pollins, Alonda C.; Cardwell, Nancy L.; Tisdale, Keonna Y.; Nanney, Lillian B.; Shack, R. Bruce; Thayer, Wesley P.

    2014-01-01

    Background Acellular nerve allografts are now standard tools in peripheral nerve repair due to decreased donor site morbidity and operative time savings. Preparation of nerve allografts involves several steps of decellularization and modification of extracellular matrix to remove chondroitin sulfate proteoglycans (CSPGs), which have been shown to inhibit neurite outgrowth through a poorly understood mechanism involving RhoA and ECM-integrin interactions. Chondroitinase ABC (ChABC) is an enzyme that degrades CSPG molecules and has been shown to promote neurite outgrowth following injury of the central and peripheral nervous systems. Variable results following chondroitinase ABC treatment make it difficult to predict the effects of this drug in human nerve allografts, especially in the presence of native extracellular signaling molecules. Several studies have shown cross-talk between neurotrophic factor and CSPG signaling pathways, but their interaction remains poorly understood. In this study, we examined the adjuvant effects of nerve growth factor (NGF) and glial cell line-derived neurotrophic factor (GDNF) on neurite outgrowth post-injury in CSPG-reduced substrates and acellular nerve allografts. Materials and Methods E12 chicken DRG explants were cultured in medium containing ChABC, ChABC + NGF, ChABC + GDNF or control media. Explants were imaged at 3 d and neurite outgrowths measured. The rat sciatic nerve injury model involved a 1-cm sciatic nerve gap that was microsurgically repaired with ChABC pre-treated acellular nerve allografts. Prior to implantation, nerve allografts were incubated in NGF, GDNF or sterile water. Nerve histology was evaluated at 5d and 8wk post-injury. Results The addition of GDNF in vitro produced significant increase in sensory neurite length at 3 d compared to ChABC alone (P < 0.01), while NGF was not significantly different from control. In vivo adjuvant NGF produced increases in total myelinated axon count (P < 0.005) and motor axon

  3. Current opinions on indications and algorithms for acellular dermal matrix use in primary prosthetic breast reconstruction.

    PubMed

    Vu, Michael M; Kim, John Y S

    2015-06-01

    Acellular dermal matrix (ADM) is widely used in primary prosthetic breast reconstruction. Many indications and contraindications to use ADM have been reported in the literature, and their use varies by institution and surgeon. Developing rational, tested algorithms to determine when ADM is appropriate can significantly improve surgical outcomes and reduce costs associated with ADM use. We review the important indications and contraindications, and discuss the algorithms that have been put forth so far. Further research into algorithmic decision-making for ADM use will allow optimized balancing of cost with risk and benefit. PMID:26161304

  4. Current opinions on indications and algorithms for acellular dermal matrix use in primary prosthetic breast reconstruction

    PubMed Central

    Vu, Michael M.

    2015-01-01

    Acellular dermal matrix (ADM) is widely used in primary prosthetic breast reconstruction. Many indications and contraindications to use ADM have been reported in the literature, and their use varies by institution and surgeon. Developing rational, tested algorithms to determine when ADM is appropriate can significantly improve surgical outcomes and reduce costs associated with ADM use. We review the important indications and contraindications, and discuss the algorithms that have been put forth so far. Further research into algorithmic decision-making for ADM use will allow optimized balancing of cost with risk and benefit. PMID:26161304

  5. Fast Monte Carlo simulation for total body irradiation using a (60)Co teletherapy unit.

    PubMed

    Liu, Xiaodong; Lack, Danielle; Rakowski, Joseph T; Knill, Cory; Snyder, Michael

    2013-05-06

    Our institution delivers TBI using a modified Theratron 780 60Co unit. Due to limitations of our treatment planning system in calculating dose for this treatment, we have developed a fast Monte Carlo code to calculate dose distributions within the patient. The algorithm is written in C and uses voxel density information from CT images to calculate dose in heterogeneous media. To test the algorithm, film-based dose measurements were made separately in a simple water phantom with a high-density insert and a RANDO phantom and then compared to doses calculated by the Monte Carlo algorithm. In addition, a separate simulation in GEANT4 was run for the RANDO phantom and compared to both film and the in-house simulation. All results were analyzed using RIT113 film analysis software. Simulations in the water phantom accurately predict the depth of maximum dose in the phantom at 0.5 cm. The measured PDD along the central axis of the beam closely matches the PDD generated from the Monte Carlo code, deviating on average by only 3% along the depth of the water phantom. Dose measured at planes inside the high-density insert had a mean difference of 4.9% on cross-profile measurement. In the RANDO phantom, gamma pass rates vary between 91% and 99% at 3 mm, 3%, and were >99% at 5 mm, 5% for the four film planes measured. Profiles taken across the film and both simulations resulted in mean relative differences of < 2% for all profiles in each slice measured. The Monte Carlo algorithm presented here is potentially a viable method for calculating dose distributions delivered in TBI treatments at our center. While not yet refined enough to be the primary method of treatment planning, the algorithm at its current resolution determines the dose distribution for one patient within a few hours, and provides clinically useful information in planning TBI. With appropriate optimization, the Monte Carlo method presented here could potentially be implemented as a first-line treatment planning

  6. Corrosion resistance of porous NiTi biomedical alloy in simulated body fluids

    NASA Astrophysics Data System (ADS)

    Stergioudi, F.; Vogiatzis, C. A.; Pavlidou, E.; Skolianos, S.; Michailidis, N.

    2016-09-01

    The corrosion performance of two porous NiTi in physiological and Hank’s solutions was investigated by potentiodynamic polarization, cyclic polarization and impedance spectroscopy. Electric models simulating the corrosion mechanism at early stages of immersion were proposed, accounting for both microstructural observations and electrochemical results. Results indicate that both porous samples were susceptible to localized corrosion. The porosity increase (from 7% to 18%) resulted in larger and wider pore openings, thus favoring the corrosion resistance of 18% porous NiTi. Strengthening of corrosion resistance was observed in Hank’s solution. The pore morphology and micro-galvanic corrosion phenomena were determining factors affecting the corrosion resistance.

  7. An order n formulation for the motion simulation of general multi-rigid-body tree systems

    NASA Astrophysics Data System (ADS)

    Anderson, K. S.

    1993-02-01

    An algorithm is developed for formulating dynamical equations of motion in a highly efficient concurrent form. The algorithm allows for the determination of system state derivative values in O(n) operation overall for tree structures. When the algorithm is implemented using symbolic manipulation to develop the explicit dynamical equations of motion, and appropriate substitutions are made for the reoccurring intermediate variable (as is done with the SWIFT program), substantial reductions in operations count per integration step are realized. If the inherent concurrency of the equations is then exploited through application on a parallel processing system, previously unrealizable simulation speed is possible.

  8. Keeping it real: revisiting a real-space approach to running ensembles of cosmological N-body simulations

    NASA Astrophysics Data System (ADS)

    Orban, Chris

    2013-05-01

    In setting up initial conditions for ensembles of cosmological N-body simulations there are, fundamentally, two choices: either maximizing the correspondence of the initial density field to the assumed fourier-space clustering or, instead, matching to real-space statistics and allowing the DC mode (i.e. overdensity) to vary from box to box as it would in the real universe. As a stringent test of both approaches, I perform ensembles of simulations using power law and a ``powerlaw times a bump'' model inspired by baryon acoustic oscillations (BAO), exploiting the self-similarity of these initial conditions to quantify the accuracy of the matter-matter two-point correlation results. The real-space method, which was originally proposed by Pen 1997 [1] and implemented by Sirko 2005 [2], performed well in producing the expected self-similar behavior and corroborated the non-linear evolution of the BAO feature observed in conventional simulations, even in the strongly-clustered regime (σ8gtrsim1). In revisiting the real-space method championed by [2], it was also noticed that this earlier study overlooked an important integral constraint correction to the correlation function in results from the conventional approach that can be important in ΛCDM simulations with Lboxlesssim1 h-1Gpc and on scales rgtrsimLbox/10. Rectifying this issue shows that the fourier space and real space methods are about equally accurate and efficient for modeling the evolution and growth of the correlation function, contrary to previous claims. An appendix provides a useful independent-of-epoch analytic formula for estimating the importance of the integral constraint bias on correlation function measurements in ΛCDM simulations.

  9. A full body musculoskeletal model based on flexible multibody simulation approach utilised in bone strain analysis during human locomotion.

    PubMed

    Al Nazer, R; Klodowski, A; Rantalainen, T; Heinonen, A; Sievänen, H; Mikkola, A

    2011-06-01

    Load-induced strains applied to bone can stimulate its development and adaptation. In order to quantify the incident strains within the skeleton, in vivo implementation of strain gauges on the surfaces of bone is typically used. However, in vivo strain measurements require invasive methodology that is challenging and limited to certain regions of superficial bones only such as the anterior surface of the tibia. Based on our previous study [Al Nazer et al. (2008) J Biomech. 41:1036-1043], an alternative numerical approach to analyse in vivo strains based on the flexible multibody simulation approach was proposed. The purpose of this study was to extend the idea of using the flexible multibody approach in the analysis of bone strains during physical activity through integrating the magnetic resonance imaging (MRI) technique within the framework. In order to investigate the reliability and validity of the proposed approach, a three-dimensional full body musculoskeletal model with a flexible tibia was used as a demonstration example. The model was used in a forward dynamics simulation in order to predict the tibial strains during walking on a level exercise. The flexible tibial model was developed using the actual geometry of human tibia, which was obtained from three-dimensional reconstruction of MRI. Motion capture data obtained from walking at constant velocity were used to drive the model during the inverse dynamics simulation in order to teach the muscles to reproduce the motion in the forward dynamics simulation. Based on the agreement between the literature-based in vivo strain measurements and the simulated strain results, it can be concluded that the flexible multibody approach enables reasonable predictions of bone strain in response to dynamic loading. The information obtained from the present approach can be useful in clinical applications including devising exercises to prevent bone fragility or to accelerate fracture healing.

  10. Keeping it real: revisiting a real-space approach to running ensembles of cosmological N-body simulations

    SciTech Connect

    Orban, Chris

    2013-05-01

    In setting up initial conditions for ensembles of cosmological N-body simulations there are, fundamentally, two choices: either maximizing the correspondence of the initial density field to the assumed fourier-space clustering or, instead, matching to real-space statistics and allowing the DC mode (i.e. overdensity) to vary from box to box as it would in the real universe. As a stringent test of both approaches, I perform ensembles of simulations using power law and a ''powerlaw times a bump'' model inspired by baryon acoustic oscillations (BAO), exploiting the self-similarity of these initial conditions to quantify the accuracy of the matter-matter two-point correlation results. The real-space method, which was originally proposed by Pen 1997 [1] and implemented by Sirko 2005 [2], performed well in producing the expected self-similar behavior and corroborated the non-linear evolution of the BAO feature observed in conventional simulations, even in the strongly-clustered regime (σ{sub 8}∼>1). In revisiting the real-space method championed by [2], it was also noticed that this earlier study overlooked an important integral constraint correction to the correlation function in results from the conventional approach that can be important in ΛCDM simulations with L{sub box}∼<1 h{sup −1}Gpc and on scales r∼>L{sub box}/10. Rectifying this issue shows that the fourier space and real space methods are about equally accurate and efficient for modeling the evolution and growth of the correlation function, contrary to previous claims. An appendix provides a useful independent-of-epoch analytic formula for estimating the importance of the integral constraint bias on correlation function measurements in ΛCDM simulations.

  11. Size-frequency distributions of fragments from SPH/ N-body simulations of asteroid impacts: Comparison with observed asteroid families

    NASA Astrophysics Data System (ADS)

    Durda, Daniel D.; Bottke, William F.; Nesvorný, David; Enke, Brian L.; Merline, William J.; Asphaug, Erik; Richardson, Derek C.

    2007-02-01

    We investigate the morphology of size-frequency distributions (SFDs) resulting from impacts into 100-km-diameter parent asteroids, represented by a suite of 161 SPH/N-body simulations conducted to study asteroid satellite formation [Durda, D.D., Bottke, W.F., Enke, B.L., Merline, W.J., Asphaug, E., Richardson, D.C., Leinhardt, Z.M., 2004. Icarus 170, 243-257]. The spherical basalt projectiles range in diameter from 10 to 46 km (in equally spaced mass increments in logarithmic space, covering six discrete sizes), impact speeds range from 2.5 to 7 km/s (generally in 1 km/s increments), and impact angles range from 15° to 75° (nearly head-on to very oblique) in 15° increments. These modeled SFD morphologies match very well the observed SFDs of many known asteroid families. We use these modeled SFDs to scale to targets both larger and smaller than 100 km in order to gain insights into the circumstances of the impacts that formed these families. Some discrepancies occur for families with parent bodies smaller than a few tens of kilometers in diameter (e.g., 832 Karin), however, so due caution should be used in applying our results to such small families. We find that ˜20 observed main-belt asteroid families are produced by the catastrophic disruption of D >100 km parent bodies. Using these data as constraints, collisional modeling work [Bottke Jr., W.F., Durda, D.D., Nesvorný, D., Jedicke, R., Morbidelli, A., Vokrouhlický, D., Levison, H.F., 2005b. Icarus 179, 63-94] suggests that the threshold specific energy, QD∗, needed to eject 50% of the target body's mass is very close to that predicted by Benz and Asphaug [Benz, W., Asphaug, E., 1999. Icarus 142, 5-20].

  12. Clinical application of cultured epithelial autografts on acellular dermal matrices in the treatment of extended burn injuries.

    PubMed

    Fang, Taolin; Lineaweaver, William C; Sailes, Frederick C; Kisner, Carson; Zhang, Feng

    2014-11-01

    Achieving permanent replacement of skin in extensive full-thickness and deep partial-thickness burn injuries and chronic wounds remains one of the fundamental surgical problems. Presently, split-thickness skin grafts are still considered the best material for surgical repair of an excised burn wound. However, in burns that affect greater than 50% of total body surface area, the patient has insufficient areas of unaffected skin from which split-thickness skin grafts can be harvested. The use of cultured epithelial (or epidermal) autografts (CEAs) has achieved satisfactory results. But the take rate of CEAs is poor in full-thickness bed or in chronically infected area. Providing temporary cover with allograft skin, or a more permanent allodermis, may increase clinical take. This review aims to (1) describe the use of CEAs in the regeneration of the epidermis, (2) introduce the application of the acellular dermal matrices (ADMs) in the clinics, and (3) enhance understanding of the CEAs applied with ADM as an appropriate strategy to treat the extended burn injuries. The current evidence regarding the cultured epithelial cell or keratinocyte autograft and dermal grafts applied in the treatment of burn injuries was investigated with an extensive electronic and manual search (MEDLINE and EMBASE). The included literature (N=136 publications) was critically evaluated focusing on the efficacy and safety of this technique in improving the healing of the deep dermal and full-thickness burn injuries. This review concluded that the use of ADM with CEAs is becoming increasingly routine, particularly as a life-saving tool after acute thermal trauma.

  13. Model-Form Uncertainty Quantification in RANS Simulation of Wing-Body Junction Flow

    NASA Astrophysics Data System (ADS)

    Wu, Jinlong; Wang, Jianxun; Xiao, Heng

    2015-11-01

    Junction flow, known as one of the remaining challenges for computational aerodynamics, occurs when a boundary layer encounters an obstacle mounted on the surface. Previous studies have shown that the RANS models are not capable to provide satisfactory prediction. In this work, a novel open-box, physics-informed Bayesian framework is used to quantify the model-form uncertainties in RANS simulation of junction flow. The first objective is to correct the bias in RANS prediction, by utilizing several observation data. The second one is to quantify the model-form uncertainties, which can enable risk-informed decision-making. To begin with a standard RANS simulation, which is performed on a 3:2 elliptic nose and NACA0020 tail cylinder, uncertainties with empirical prior knowledge and physical constraints are directly injected into the Reynolds stresses term, and the unbiased knowledge from observation data is incorporated by an iterative ensemble Kalman method. Current results show that the bias in the quantities of interest (QoIs) of the RANS prediction, e.g., mean velocity, turbulent kinetic energy, etc, can be significantly corrected by this novel Bayesian framework. The probability density distributions of QoIs show that the model-form uncertainty can be quantified as well.

  14. A Density Functional Equation of State for Supernova Simulations with 3-body forces and Quark Gluon Plasma

    NASA Astrophysics Data System (ADS)

    Mathews, Grant J.; Meixner, Matthew; Olson, J. Pocahontas; Lan, Nguyen Q.; Dalhed, Holister E.

    2013-10-01

    We present an updated and improved equation of state (which we call the NDL EoS) for use in neutron-star structure and core-collapse supernova simulations. This EoS is begins with a framework originally developed by Bowers & Wilson, but there are numerous changes. Among them are: (1) a reformulation in the context of density functional theory; (2) the possibility of the formation of material with a net proton excess (Ye > 0 . 5); (3) an improved treatment of the nuclear statistical equilibrium and the transition to heavy nuclei as the density approaches nuclear matter density; (4) an improved treatment of the effects of pions in the regime above nuclear matter density including the incorporation of all the known mesonic and baryonic states at high temperature; (5) the effects of 3-body nuclear forces at high densities; and (6) the possibility of a first-order or crossover transition to a QCD chiral symmetry restoration and deconfinement phase at densities above nuclear matter density. This paper details the physics of, and constraints on, this new EoS and describes its implementation in numerical simulations. We show comparisons of this EoS with other equations of state commonly used in supernova collapse simulations. Work at the University of Notre Dame is supported by the U.S. Department of Energy under Nuclear Theory Grant DE-FG02-95-ER40934.

  15. Numerical Simulation of Planar and Axisymmetric Unsteady Flows Over Vibrating Bodies

    NASA Astrophysics Data System (ADS)

    Venkat, N. Kolluru

    1991-02-01

    Engineering applications of unsteady boundary layers are numerous and of great importance in hydro and aero dynamics. Relatively little research however is focussed on understanding the flow structure if the perturbations in the flow are caused by the motion of flexible boundaries rather than by time dependent variations in the flow itself. A model is therefore developed to examine the hydrodynamic characteristics of external laminar flow over an arbitrarily shaped body, a portion of which is subjected to harmonic motion. A vorticity-stream function formulation of the Navier-Stokes equations is used. A boundary fitted coordinate system is adopted to allow accurate modeling in the presence of the time dependent motion of the body surface. The flow equations are solved using a Thompson Tri Diagonal Finite Difference Algorithm. Inviscid-viscous interaction theory is used to split the model domain and save computational time. The model is tested by comparison to selected numerical, experimental or analytical results for flow over a cavity, boundary layer flow along a flat plate and time dependent flow in a channel with wavy walls. The model is then applied to predict the flow over a flat plate and circular cylinder with a section forced in simple harmonic motion. The nonlinear response of the flow is investigated for various Reynolds numbers, Re, Strouhal number, St, (ratio of the flow advective time scale to the plate or cylinder oscillation period), vibration amplitude ration, bf{H _ 0} (vibration amplitude divided by plate or cylinder vibrating section length) and the vibration mode number, n. The time varying friction (bf{C_ f}) and pressure ( bf{C_ p}) coefficients along the vibrating plate and cylinder are analyzed using Fast Fourier Transform techniques (FFT). Model results show that for low St and bf {H_ 0} the response of the external flow to the plate vibration amplitude is linear and there is little up or downstream influence. For high St, Re and bf{H_ 0

  16. N-S/DSMC hybrid simulation of hypersonic flow over blunt body including wakes

    NASA Astrophysics Data System (ADS)

    Li, Zhonghua; Li, Zhihui; Li, Haiyan; Yang, Yanguang; Jiang, Xinyu

    2014-12-01

    A hybrid N-S/DSMC method is presented and applied to solve the three-dimensional hypersonic transitional flows by employing the MPC (modular Particle-Continuum) technique based on the N-S and the DSMC method. A sub-relax technique is adopted to deal with information transfer between the N-S and the DSMC. The hypersonic flows over a 70-deg spherically blunted cone under different Kn numbers are simulated using the CFD, DSMC and hybrid N-S/DSMC method. The present computations are found in good agreement with DSMC and experimental results. The present method provides an efficient way to predict the hypersonic aerodynamics in near-continuum transitional flow regime.

  17. Integrated Simulation between Flexible Body of Catenary and Active Control Pantograph for Contact Force Variation Control

    NASA Astrophysics Data System (ADS)

    Abdullah, Mohd Azman; Michitsuji, Yohei; Nagai, Masao; Miyajima, Naoki

    Railway transport has been developed for a variety of requirements with a diversity of studies and technologies in recent years. In particular, the intercity railway transport that can be operated at speed of more than 350 km/h is the goal for the railway industry. Due to vibration and drag forces at high speed, contact force variation occurs between pantograph and catenary. This variation also causes instability in the pantograph and catenary interaction. In this study, multibody dynamics analysis is used to model the catenary. The integration of the catenary model and the pantograph model in the simulation flow produces contact force variations. A sinusoidal feed forward force and a simple feedback control force are applied to control the wave-like contact force fluctuations by means of active dampers. Evaluation of the combination of active control forces will produce optimized forces that may be able to maintain, thus improve the contact force variations.

  18. Counts-in-cells analysis of the statistical distribution in an N-body simulated universe

    NASA Astrophysics Data System (ADS)

    Ueda, Haruhiko; Yokoyama, Jun'ichi

    1996-06-01

    Evolution of the statistical distribution of the density field is investigated by means of a counts-in-cells method in a low-density cold dark matter (CDM) simulated universe. Four model distributions, namely the negative binomial distribution, the lognormal distribution, the Edgeworth series and the skewed lognormal distribution, are tested to fit the calculated distribution function, and it is shown that only the skewed lognormal distribution of second- and third-order can describe the evolution of the statistical distribution perfectly well from the initially Gaussian regime to the present stage. The effect of sparse sampling is also investigated, and we conclude that in order to reconstruct the underlying density distribution we should use a sample with a galaxy number density larger than ~0.01h^3 Mpc^-3.

  19. Testing lowered isothermal models with direct N-body simulations of globular clusters

    NASA Astrophysics Data System (ADS)

    Zocchi, Alice; Gieles, Mark; Hénault-Brunet, Vincent; Varri, Anna Lisa

    2016-10-01

    Several self-consistent models have been proposed, aiming at describing the phase-space distribution of stars in globular clusters. This study explores the ability of the recently proposed LIMEPY models to reproduce the dynamical properties of direct N-body models of a cluster in a tidal field, during its entire evolution. These dynamical models include prescriptions for the truncation and the degree of radially biased anisotropy contained in the system, allowing us to explore the interplay between the role of anisotropy and tides in various stages of the life of star clusters. We show that the amount of anisotropy in an initially tidally underfilling cluster increases in the pre-collapse phase, and then decreases with time, due to the effect of the external tidal field on its spatial truncation. This is reflected in the correspondent model parameters, and the best-fitting models reproduce the main properties of the cluster at all stages of its evolution, except for the phases immediately preceding and following core collapse. We also notice that the best-fitting LIMEPY models are significantly different from isotropic King models, especially in the first part of the evolution of the cluster. Our results put limits on the amount of radial anisotropy that can be expected for clusters evolving in a tidal field, which is important to understand other factors that could give rise to similar observational signatures, such as the presence of an intermediate-mass black hole.

  20. Navier-Stokes simulation of a close-coupled canard-wing-body configuration

    NASA Technical Reports Server (NTRS)

    Tu, Eugene L.

    1991-01-01

    The thin-layer Navier-Stokes equations are solved for the flow about a coplanar close-coupled canard-wing-body configuration at a transonic Mach number of 0.90 and at angles of attack ranging from 0 to 12 degrees. The influence of the canard on the wing flowfield, including canard-wing vortex interaction and wing vortex breakdown, is investigated. A study of canard downwash and canard leading-edge vortex effects, which are the primary mechanisms of the canard-wing interaction, is emphasized. Comparisons between the computations and experimental measurements of surface pressure coefficients, lift, drag and pitching moment data are favorable. A grid refinement study for configurations with and without canard shows that accurate results are obtained using a refined grid for angles of attack where vortex burst is present. At an angle of attack of approximately 12 deg, favorable canard-wing interaction which delays wing vortex breakdown is indicated by the computations and is in good agreement with experimental findings.

  1. Fabrication of nanotube arrays on commercially pure titanium and their apatite-forming ability in a simulated body fluid

    SciTech Connect

    Hsu, Hsueh-Chuan; Wu, Shih-Ching; Hsu, Shih-Kuang; Chang, Yu-Chen; Ho, Wen-Fu

    2015-02-15

    In this study, we investigated self-organized TiO{sub 2} nanotubes that were grown using anodization of commercially pure titanium at 5 V or 10 V in NH{sub 4}F/NaCl electrolyte. The nanotube arrays were annealed at 450 °C for 3 h to convert the amorphous nanotubes to anatase and then they were immersed in simulated body fluid at 37 °C for 0.5, 1, and 14 days. The purpose of this experiment was to evaluate the apatite-formation abilities of anodized Ti nanotubes with different tube diameters and lengths. The nanotubes that formed on the surfaces of Ti were examined using a field emission scanning electron microscope, X-ray diffraction, and X-ray photoelectron spectroscope. When the anodizing potential was increased from 5 V to 10 V, the pore diameter of the nanotube increased from approximately 24–30 nm to 35–53 nm, and the tube length increased from approximately 590 nm to 730 nm. In vitro testing of the heat-treated nanotube arrays indicated that Ca-P formation occurred after only 1 day of immersion in simulated body fluid. This result was particularly apparent in the samples that were anodized at 10 V. It was also found that the thickness of the Ca-P layer increases as the applied potential for anodized c.p. Ti increases. The average thickness of the Ca-P layer on Ti that was anodized at 5 V and 10 V was approximately 170 nm and 190 nm, respectively, after immersion in simulated body fluid for 14 days. - Highlights: • TiO{sub 2} nanotube on Ti surface was formed by anodic oxidation in a NaCl/NH{sub 4}F solution. • TiO{sub 2} layers show a tube length of 590 nm and 730 nm at 5 V and 10 V, respectively. • After soaking in SBF, Ca-P layer completely covered the entire nanotubular surfaces. • The Ca-P layer was thicker on the Ti surface anodized at 10 V.

  2. Core Formation And Gravothermal Collapse Of Self-interacting Dark Matter Halos: Monte Carlo N-body simulation versus Conducting Fluid Model

    NASA Astrophysics Data System (ADS)

    Koda, Jun; Shapiro, P. R.

    2007-12-01

    Self-interacting dark matter (SIDM) has been proposed to solve the cuspy core problem of dark matter halos in standard CDM. There are two ways to investigate the effect of the 2-body, non-gravitational, elastic collisions of SIDM, Monte-Carlo N-body simulation and a conducting fluid model. The former is a gravitational N-body simulation with a Monte Carlo algorithm for the SIDM scattering that changes the direction of N-body particles randomly according to a given scattering cross section. The latter is a system of fluid conservation equations with a thermal conduction that describes the collisional effect, which was originally invented to describe the gravothermal collapse of globular clusters. Our previous work found a significant disagreement as regards the strength of collisionality required to solve cuspy core problem. However the two methods have not been properly tested against each other. Here, we make direct comparisons between Monte Carlo N-body simulations and analytic and numerical solutions of the conducting fluid (gaseous) model, for various isolated self-interacting dark matter halos. The N-body simulations reproduce the analytical self-similar solution of gravothermal collapse in the fluid model when one free parameter, the coefficient of heat conduction C, is chosen to be 0.75. The gravothermal collapse results of the simulations agrees well with our 1D numerical hydro solutions of the fluid model within 20% for other initial conditions, including Plummer model, Hernquist profile and NFW profile. In conclusion the conducting fluid model is in reasonably good agreement with the Monte Carlo simulations for isolated halos. We will pursue the origin of the reported disagreement between two methods in a cosmological environment by comparing new N-body simulations with fully cosmological initial conditions.

  3. ESTIMATING SMALL ANGULAR SCALE COSMIC MICROWAVE BACKGROUND ANISOTROPY WITH HIGH-RESOLUTION N-BODY SIMULATIONS: WEAK LENSING

    SciTech Connect

    Fullana, M. J.; Arnau, J. V.; Thacker, R. J.; Couchman, H. M. P.; Saez, D.

    2010-03-20

    We estimate the impact of weak lensing by strongly nonlinear cosmological structures on the cosmic microwave background. Accurate calculation of large l multipoles requires N-body simulations and ray-tracing schemes with both high spatial and temporal resolution. To this end, we have developed a new code that combines a gravitational Adaptive Particle-Particle, Particle-Mesh solver with a weak-lensing evaluation routine. The lensing deviations are evaluated while structure evolves during the simulation so that all evolution steps-rather than just a few outputs-are used in the lensing computations. The new code also includes a ray-tracing procedure that avoids periodicity effects in a universe that is modeled as a three-dimensional torus in the standard way. Results from our new simulations are compared with previous ones based on Particle-Mesh simulations. We also systematically investigate the impact of box volume, resolution, and ray-tracing directions on the variance of the computed power spectra. We find that a box size of 512 h {sup -1} Mpc is sufficient to provide a robust estimate of the weak-lensing angular power spectrum in the l-interval (2000-7000). For a reaslistic cosmological model, the power [l(l + 1)C{sub l}/2pi]{sup 1/2} takes on values of a few muK in this interval, which suggests that a future detection is feasible and may explain the excess power at high l in the Berkeley-Illinois-Maryland Association and Cosmic Background Imager observations.

  4. A Regularized Galerkin Boundary Element Method (RGBEM) for Simulating Potential Flow About Zero Thickness Bodies

    SciTech Connect

    GHARAKHANI,ADRIN; WOLFE,WALTER P.

    1999-10-01

    The prediction of potential flow about zero thickness membranes by the boundary element method constitutes an integral component of the Lagrangian vortex-boundary element simulation of flow about parachutes. To this end, the vortex loop (or the panel) method has been used, for some time now, in the aerospace industry with relative success [1, 2]. Vortex loops (with constant circulation) are equivalent to boundary elements with piecewise constant variation of the potential jump. In this case, extending the analysis in [3], the near field potential velocity evaluations can be shown to be {Omicron}(1). The accurate evaluation of the potential velocity field very near the parachute surface is particularly critical to the overall accuracy and stability of the vortex-boundary element simulations. As we will demonstrate in Section 3, the boundary integral singularities, which arise due to the application of low order boundary elements, may lead to severely spiked potential velocities at vortex element centers that are near the boundary. The spikes in turn cause the erratic motion of the vortex elements, and the eventual loss of smoothness of the vorticity field and possible numerical blow up. In light of the arguments above, the application of boundary elements with (at least) a linear variation of the potential jump--or, equivalently, piecewise constant vortex sheets--would appear to be more appropriate for vortex-boundary element simulations. For this case, two strategies are possible for obtaining the potential flow field. The first option is to solve the integral equations for the (unknown) strengths of the surface vortex sheets. As we will discuss in Section 2.1, the challenge in this case is to devise a consistent system of equations that imposes the solenoidality of the locally 2-D vortex sheets. The second approach is to solve for the unknown potential jump distribution. In this case, for commonly used C{sup o} shape functions, the boundary integral is singular at

  5. Supine exercise during lower body negative pressure effectively simulates upright exercise in normal gravity

    NASA Technical Reports Server (NTRS)

    Murthy, G.; Watenpaugh, D. E.; Ballard, R. E.; Hargens, A. R.

    1994-01-01

    Exercise within a lower body negative pressure (LBNP) chamber in supine posture was compared with similar exercise against Earth's gravity (without LBNP) in upright posture in nine healthy male volunteers. We measured footward force with a force plate, pressure in soleus and tibialis anterior muscles of the leg with transducer-tipped catheters, calf volume by strain gauge plethysmography, heart rate, and systolic and diastolic blood pressures during two conditions: 1) exercise in supine posture within an LBNP chamber during 100-mmHg LBNP (exercise-LBNP) and 2) exercise in upright posture against Earth's gravity without LBNP (exercise-1 G). Subjects exercised their ankle joints (dorsi- and plantarflexions) for 5 min during exercise-LBNP and for 5 min during exercise-1 G. Mean footward force produced during exercise-LBNP (743 +/- 37 N) was similar to that produced during exercise-1 G (701 +/- 24 N). Peak contraction pressure in the antigravity soleus muscle during exercise-LBNP (115 +/- 10 mmHg) was also similar to that during exercise-1 G (103 +/- 13 mmHg). Calf volume increased significantly by 3.3 +/- 0.5% during exercise-LBNP compared with baseline values. Calf volume did not increase significantly during exercise-1 G. Heart rate was significantly higher during exercise-LBNP (99 +/- 5 beats/min) than during exercise-1 G (81 +/- 3 beats/min). These results indicate that exercise in supine posture within an LBNP chamber can produce similar musculoskeletal stress in the legs and greater systemic cardiovascular stress than exercise in the upright posture against Earth's gravity.

  6. Creation and implantation of acellular rat renal ECM-based scaffolds

    PubMed Central

    Peloso, Andrea; Ferrario, Jacopo; Maiga, Benedetta; Benzoni, Ilaria; Bianco, Carolina; Citro, Antonio; Currao, Manuela; Malara, Alessandro; Gaspari, Annalisa; Balduini, Alessandra; Abelli, Massimo; Piemonti, Lorenzo; Dionigi, Paolo; Orlando, Giuseppe; Maestri, Marcello

    2015-01-01

    Abstract Kidney transplantation is the only potentially curative treatment for patient facing end-stage renal disease, and it is now routinely used. Its use is mainly limited by the supply of transplantable donor organs, which far exceeds the demand. Regenerative medicine and tissue engineering offer promising means for overcoming this shortage. In the present study, we developed and validated a protocol for producing acellular rat renal scaffolds. Left kidneys were removed from 26 male Lewis rats (weights: 250–350 g) and decellularized by means of aortic anterograde perfusion with ionic and anionic detergents (Triton X-100 1% and SDS 1%, respectively). 19 scaffolds thus obtained (and contralateral native kidneys as controls) were deeply characterized in order to evaluate the decellularization quality, the preservation of extracellular matrix components and resultant micro-angioarchitecture structure. The other 7 were transplanted into 7 recipient rats that had undergone unilateral nephrectomy. Recipients were sacrificed on post-transplantation day 7 and the scaffolds subjected to histologic studies. The dual-detergent protocol showed, with only 5 h of perfusion per organ, to obtain thoroughly decellularized renal scaffolds consisting almost exclusively of extracellular matrix. Finally the macro- and the microarchitecture of the renal parenchyma were well preserved, and the grafts were implanted with ease. Seven days after transplant, the scaffolds were morphologically intact although all vascular structures were obstructed with thrombi. Production and implantation of acellular rat renal scaffolds is a suitable platform for further studies on regenerative medicine and tissue engineering. PMID:26186418

  7. Aseptic versus Sterile Acellular Dermal Matrices in Breast Reconstruction: An Updated Review

    PubMed Central

    Mendenhall, Shaun D.; Neumeister, Michael W.; Cederna, Paul S.; Momoh, Adeyiza O.

    2016-01-01

    Background: As the use of acellular dermal matrices in breast reconstruction has become more commonplace and efforts are made to improve on postoperative outcomes, the method of acellular dermal matrix (ADM) processing (aseptic versus sterile) has become a subject of interest. This article provides an updated overview of the critical aspects of ADM processing in addition to application of ADMs in single- and two-stage breast reconstruction, a review of the morbidity associated with ADM use, and alternatives. Methods: A literature review was performed in PubMed identifying recent systematic reviews, meta-analyses, and head-to-head comparisons on aseptically processed ADM and sterile-processed ADM in implant-based breast reconstruction. Results: Recent meta-analyses have shown a 2- to 3-fold increase in infections and tissue expander/implant explantation rates and a 3- to 4-fold increase in seroma formation compared with non-ADM reconstruction techniques. Comparisons of aseptic and sterile ADMs in multiple studies have shown no significant difference in infection rates and equivocal findings for other specific complications such as seroma formation. Conclusions: Current evidence on the impact of processing techniques that improve ADM sterility on postoperative morbidity in implant breast reconstruction is unclear. Deficiencies of the available data highlight the need for well-designed, multicenter, randomized controlled studies that will aid in optimizing outcomes in implant-based breast reconstruction. PMID:27536502

  8. Xenogeneic acellular conjunctiva matrix as a scaffold of tissue-engineered corneal epithelium.

    PubMed

    Zhao, Haifeng; Qu, Mingli; Wang, Yao; Wang, Zhenyu; Shi, Weiyun

    2014-01-01

    Amniotic membrane-based tissue-engineered corneal epithelium has been widely used in the reconstruction of the ocular surface. However, it often degrades too early to ensure the success of the transplanted corneal epithelium when treating patients with severe ocular surface disorders. In the present study, we investigated the preparation of xenogeneic acellular conjunctiva matrix (aCM) and evaluated its efficacy and safety as a scaffold of tissue-engineered corneal epithelium. Native porcine conjunctiva was decellularized with 0.1% sodium dodecyl sulfate (SDS) for 12 h at 37°C and sterilized via γ-irradiation. Compared with native conjunctiva, more than 92% of the DNA was removed, and more than 90% of the extracellular matrix components (glycosaminoglycan and collagen) remained after the decellularization treatment. Compared with denuded amniotic membrane (dAM), the aCM possessed favorable optical transmittance, tensile strength, stability and biocompatibility as well as stronger resistance to degradation both in vitro and in vivo. The corneal epithelial cells seeded on aCM formed a multilayered epithelial structure and endured longer than did those on dAM. The aCM-based tissue-engineered corneal epithelium was more effective in the reconstruction of the ocular surface in rabbits with limbal stem cell deficiency. These findings support the application of xenogeneic acellular conjunctiva matrix as a scaffold for reconstructing the ocular surface.

  9. Deficiency in acellular cementum and periodontal attachment in bsp null mice.

    PubMed

    Foster, B L; Soenjaya, Y; Nociti, F H; Holm, E; Zerfas, P M; Wimer, H F; Holdsworth, D W; Aubin, J E; Hunter, G K; Goldberg, H A; Somerman, M J

    2013-02-01

    Bone sialoprotein (BSP) is an extracellular matrix protein found in mineralized tissues of the skeleton and dentition. BSP is multifunctional, affecting cell attachment and signaling through an RGD integrin-binding region, and acting as a positive regulator for mineral precipitation by nucleating hydroxyapatite crystals. BSP is present in cementum, the hard tissue covering the tooth root that anchors periodontal ligament (PDL) attachment. To test our hypothesis that BSP plays an important role in cementogenesis, we analyzed tooth development in a Bsp null ((-/-)) mouse model. Developmental analysis by histology, histochemistry, and SEM revealed a significant reduction in acellular cementum formation on Bsp (-/-) mouse molar and incisor roots, and the cementum deposited appeared hypomineralized. Structural defects in cementum-PDL interfaces in Bsp (-/-) mice caused PDL detachment, likely contributing to the high incidence of incisor malocclusion. Loss of BSP caused progressively disorganized PDL and significantly increased epithelial down-growth with aging. Bsp (-/-) mice displayed extensive root and alveolar bone resorption, mediated by increased RANKL and the presence of osteoclasts. Results collected here suggest that BSP plays a non-redundant role in acellular cementum formation, likely involved in initiating mineralization on the root surface. Through its importance to cementum integrity, BSP is essential for periodontal function. PMID:23183644

  10. The acellular matrix (ACM) for bladder tissue engineering: A quantitative magnetic resonance imaging study.

    PubMed

    Cheng, Hai-Ling Margaret; Loai, Yasir; Beaumont, Marine; Farhat, Walid A

    2010-08-01

    Bladder acellular matrices (ACMs) derived from natural tissue are gaining increasing attention for their role in tissue engineering and regeneration. Unlike conventional scaffolds based on biodegradable polymers or gels, ACMs possess native biomechanical and many acquired biologic properties. Efforts to optimize ACM-based scaffolds are ongoing and would be greatly assisted by a noninvasive means to characterize scaffold properties and monitor interaction with cells. MRI is well suited to this role, but research with MRI for scaffold characterization has been limited. This study presents initial results from quantitative MRI measurements for bladder ACM characterization and investigates the effects of incorporating hyaluronic acid, a natural biomaterial useful in tissue-engineering and regeneration. Measured MR relaxation times (T(1), T(2)) and diffusion coefficient were consistent with increased water uptake and glycosaminoglycan content observed on biochemistry in hyaluronic acid ACMs. Multicomponent MRI provided greater specificity, with diffusion data showing an acellular environment and T(2) components distinguishing the separate effects of increased glycosaminoglycans and hydration. These results suggest that quantitative MRI may provide useful information on matrix composition and structure, which is valuable in guiding further development using bladder ACMs for organ regeneration and in strategies involving the use of hyaluronic acid.

  11. Creation and implantation of acellular rat renal ECM-based scaffolds.

    PubMed

    Peloso, Andrea; Ferrario, Jacopo; Maiga, Benedetta; Benzoni, Ilaria; Bianco, Carolina; Citro, Antonio; Currao, Manuela; Malara, Alessandro; Gaspari, Annalisa; Balduini, Alessandra; Abelli, Massimo; Piemonti, Lorenzo; Dionigi, Paolo; Orlando, Giuseppe; Maestri, Marcello

    2015-01-01

    Kidney transplantation is the only potentially curative treatment for patient facing end-stage renal disease, and it is now routinely used. Its use is mainly limited by the supply of transplantable donor organs, which far exceeds the demand. Regenerative medicine and tissue engineering offer promising means for overcoming this shortage. In the present study, we developed and validated a protocol for producing acellular rat renal scaffolds. Left kidneys were removed from 26 male Lewis rats (weights: 250-350 g) and decellularized by means of aortic anterograde perfusion with ionic and anionic detergents (Triton X-100 1% and SDS 1%, respectively). 19 scaffolds thus obtained (and contralateral native kidneys as controls) were deeply characterized in order to evaluate the decellularization quality, the preservation of extracellular matrix components and resultant micro-angioarchitecture structure. The other 7 were transplanted into 7 recipient rats that had undergone unilateral nephrectomy. Recipients were sacrificed on post-transplantation day 7 and the scaffolds subjected to histologic studies. The dual-detergent protocol showed, with only 5 h of perfusion per organ, to obtain thoroughly decellularized renal scaffolds consisting almost exclusively of extracellular matrix. Finally the macro- and the microarchitecture of the renal parenchyma were well preserved, and the grafts were implanted with ease. Seven days after transplant, the scaffolds were morphologically intact although all vascular structures were obstructed with thrombi. Production and implantation of acellular rat renal scaffolds is a suitable platform for further studies on regenerative medicine and tissue engineering. PMID:26186418

  12. Sterile acellular dermal collagen as a treatment for rippling deformity of breast.

    PubMed

    Busse, Brittany; Orbay, Hakan; Sahar, David E

    2014-01-01

    Prosthetic implants are frequently used for breast augmentation and breast reconstruction following mastectomy. Unfortunately, long-term aesthetic results of prosthetic breast restoration may be hindered by complications such as rippling, capsular contracture, and implant malposition. The advent of use of acellular dermal matrices has greatly improved the outcomes of prosthetic breast reconstruction. We describe a case of rippling deformity of breast that was treated using an acellular dermal matrix product, AlloMax. The patient presented with visible rippling of bilateral prosthetic breast implants as well as significant asymmetry of the breasts after multiple excisional biopsies for right breast ductal carcinoma in situ. A 6 × 10 cm piece of AlloMax was placed on the medial aspect of each breast between the implant and the skin flap. Follow-up was performed at 1 week, 3 months, and 1 year following the procedure. The patient recovered well from the surgery and there were no complications. At her first postoperative follow-up the patient was extremely satisfied with the result. At her 3-month and 1-year follow-up she had no recurrence of her previous deformity and no new deformity. PMID:25610697

  13. Waning vaccine immunity in teenagers primed with whole cell and acellular pertussis vaccine: recent epidemiology.

    PubMed

    Sheridan, Sarah L; Frith, Katie; Snelling, Thomas L; Grimwood, Keith; McIntyre, Peter B; Lambert, Stephen B

    2014-09-01

    The recent epidemics of pertussis (whooping cough) in parts of the USA and Australia have led to the largest numbers of annual cases reported in over half a century. These epidemics demonstrated a new pattern, with particularly high rates of disease among pre-adolescents and early adolescents. These high rates of pertussis coincided with the first cohorts vaccinated with purely acellular pertussis vaccine, which replaced whole-cell pertussis (wP) vaccine in the later 1990s in the USA and Australia. Studies undertaken during these epidemics provide new evidence of more rapid waning of acellular pertussis-containing vaccines and longer-term protection from effective wP-containing vaccines. There is evidence that receiving wP as at least the first dose of pertussis-containing vaccine provides greater and more long-lived protection, irrespective of the nature of subsequent doses. This evidence will be reviewed together with the immunobiology associated with both vaccines, and the implications for pertussis control discussed. PMID:25093268

  14. Alternatives to HIST for acellular pertussis vaccines: progress and challenges in replacement

    PubMed Central

    Arciniega, J.; Wagner, L.; Prymula, R.; Sebo, P.; Isbrucker, R.; Descampe, B.; Chapsal, J.M.; Costanzo, A.; Hendriksen, C.; Hoonaker, M.; Nelson, S.; Lidster, K.; Casey, W.; Allen, D.

    2016-01-01

    The ‘International Workshop on Alternatives to the Murine Histamine Sensitization Test for Acellular Pertussis Vaccines: Progress and Challenges in the Replacement of HIST’ was held on 24 August 2014, in Prague, Czech Republic, as a satellite meeting to the 9 th World Congress on Alternatives and Animal Use in the Life Sciences. Participants discussed the progress and challenges associated with the development, validation, and implementation of in vitro assays as replacements for the histamine sensitisation test (HIST) for acellular pertussis vaccines. Discussions focused on the consistency approach, the necessary framework for regulatory acceptance of a harmonised method, and recent international efforts towards the development of in vitro assays to replace the HIST. Workshop participants agreed that acceptable alternatives to the HIST should be based on ADP ribosylation-mediated cell intoxication and therefore that the CHO cell clustering assay, which measures cell intoxication, should be further pursued and developed as a possible replacement for the HIST. Participants also agreed to continue ongoing multinational discussions involving national and international standardisation authorities to reach consensus and to organise collaborative studies in this context for assay characterisation and calibration of reference materials. PMID:27506225

  15. Dissolution and precipitation behaviors of silicon-containing ceramic coating on Mg-Zn-Ca alloy in simulated body fluid.

    PubMed

    Pan, Yaokun; Chen, Chuanzhong; Wang, Diangang; Huang, Danlan

    2014-10-01

    We prepared Si-containing and Si-free coatings on Mg-1.74Zn-0.55Ca alloy by micro-arc oxidation. The dissolution and precipitation behaviors of Si-containing coating in simulated body fluid (SBF) were discussed. Corrosion products were characterized by scanning electron microscope (SEM), X-ray diffractometer (XRD), fourier transform infrared spectrometer (FT-IR) and X-ray photoelectron spectrometer (XPS). Electrochemical workstation, inductively coupled plasma atomic emission spectrometer (ICP-AES), flame atomic absorption spectrophotometer (AAS) and pH meter were employed to detect variations of electrochemical parameter and ions concentration respectively. Results indicate that the fast formation of calcium phosphates is closely related to the SiOx(n-) groups, which induce the heterogeneous nucleation of amorphous hydroxyapatite (HA) by sorption of calcium and phosphate ions. PMID:25174544

  16. Fluoride-containing bioactive glasses: surface reactivity in simulated body fluids solutions.

    PubMed

    Lusvardi, G; Malavasi, G; Menabue, L; Aina, V; Morterra, C

    2009-11-01

    The issue of the contribution of the addition of F to glass bioactivity is not well resolved. This work reports on the surface reactivity in different solutions (DMEM and Tris) for some potentially bioactive glasses based on the composition of 45S5 glass, in which CaF(2) is substituted alternately for (part of) CaO and Na(2)O. The reactivity of F-containing glasses has been compared with that of the reference 45S5 system. The aim of this study is to explain in detail the mechanism of formation of an apatitic crystalline phase at the interface between the inorganic material and simulated biological media. A multi-technique investigation approach proposes a set of reactions involving Ca-carbonate formation, which are somewhat different from that formerly proposed by Hench for 45S5 bioactive glass, and which occur when a F-containing glass surface is in contact with a SBF. The usefulness of IR spectroscopy in recognizing the starting step of apatite (and/or FA) formation with respect to XRD technique is well established here. PMID:19523544

  17. Evaluation of an Anthropometric Human Body Model for Simulated EVA Task Assessment

    NASA Technical Reports Server (NTRS)

    Etter, Brad

    1996-01-01

    One of the more mission-critical tasks performed in space is extravehicular activity (EVA) which requires the astronaut to be external to the station or spacecraft, and subsequently at risk from the many threats posed by space. These threats include, but are not limited to: no significant atmosphere, harmful electromagnetic radiation, micrometeoroids, and space debris. To protect the astronaut from this environment, a special EVA suit is worn which is designed to maintain a sustainable atmosphere (at 1/3 atmosphere) and provide protection against the hazards of space. While the EVA suit serves these functions well, it does impose limitations on the astronaut as a consequence of the safety it provides. Since the astronaut is in a virtual vacuum, any atmospheric pressure inside the suit serves to pressurize the suit and restricts mobility of flexible joints (such as fabric). Although some of the EVA suit joints are fixed, rotary-style joints, most of the mobility is achieved by the simple flexibility of the fabric. There are multiple layers of fabric, each of which serves a special purpose in the safety of the astronaut. These multiple layers add to the restriction of motion the astronaut experiences in the space environment. Ground-based testing is implemented to evaluate the capability of EVA-suited astronauts to perform the various tasks in space. In addition to the restriction of motion imposed by the EVA suit, most EVA activity is performed in a micro-gravity (weight less) environment. To simulate weightlessness EVA-suited testing is performed in a neutral buoyancy simulator (NBS). The NBS is composed of a large container of water (pool) in which a weightless environment can be simulated. A subject is normally buoyant in the pressurized suit; however he/she can be made neutrally buoyant with the addition of weights. In addition, most objects the astronaut must interface with in the NBS sink in water and flotation must be added to render them "weightless". The

  18. DSMC Simulation of Separated Flows About Flared Bodies at Hypersonic Conditions

    NASA Technical Reports Server (NTRS)

    Moss, James N.

    2000-01-01

    This paper describes the results of a numerical study of interacting hypersonic flows at conditions that can be produced in ground-based test facilities. The computations are made with the direct simulation Monte Carlo (DSMC) method of Bird. The focus is on Mach 10 flows about flared axisymmetric configurations, both hollow cylinder flares and double cones. The flow conditions are those for which experiments have been or will be performed in the ONERA R5Ch low-density wind tunnel and the Calspan-University of Buffalo Research Center (CUBRC) Large Energy National Shock (LENS) tunnel. The range of flow conditions, model configurations, and model sizes provides a significant range of shock/shock and shock/boundary layer interactions at low Reynolds number conditions. Results presented will highlight the sensitivity of the calculations to grid resolution, contrast the differences in flow structure for hypersonic cold flows and those of more energetic but still low enthalpy flows, and compare the present results with experimental measurements for surface heating, pressure, and extent of separation.

  19. Satellite alignment. I. Distribution of substructures and their dependence on assembly history from n-body simulations

    SciTech Connect

    Wang, Yang Ocean; Lin, W. P.; Yu, Yu; Kang, X.; Dutton, Aaron; Macciò, Andrea V. E-mail: linwp@shao.ac.cn

    2014-05-01

    Observations have shown that the spatial distribution of satellite galaxies is not random, but aligned with the major axes of central galaxies. This alignment is dependent on galaxy properties, such that red satellites are more strongly aligned than blue satellites. Theoretical work conducted to interpret this phenomenon has found that it is due to the non-spherical nature of dark matter halos. However, most studies overpredict the alignment signal under the assumption that the central galaxy shape follows the shape of the host halo. It is also not clear whether the color dependence of alignment is due to an assembly bias or an evolution effect. In this paper we study these problems using a cosmological N-body simulation. Subhalos are used to trace the positions of satellite galaxies. It is found that the shapes of dark matter halos are mis-aligned at different radii. If the central galaxy shares the same shape as the inner host halo, then the alignment effect is weaker and agrees with observational data. However, it predicts almost no dependence of alignment on the color of satellite galaxies, though the late accreted subhalos show stronger alignment with the outer layer of the host halo than their early accreted counterparts. We find that this is due to the limitation of pure N-body simulations where satellite galaxies without associated subhalos ('orphan galaxies') are not resolved. These orphan (mostly red) satellites often reside in the inner region of host halos and should follow the shape of the host halo in the inner region.

  20. A high-order adaptive Cartesian cut-cell method for simulation of compressible viscous flow over immersed bodies

    NASA Astrophysics Data System (ADS)

    Muralidharan, Balaji; Menon, Suresh

    2016-09-01

    A new adaptive finite volume conservative cut-cell method that is third-order accurate for simulation of compressible viscous flows is presented. A high-order reconstruction approach using cell centered piecewise polynomial approximation of flow quantities, developed in the past for body-fitted grids, is now extended to the Cartesian based cut-cell method. It is shown that the presence of cut-cells of very low volume results in numerical oscillations in the flow solution near the embedded boundaries when standard small cell treatment techniques are employed. A novel cell clustering approach for polynomial reconstruction in the vicinity of the small cells is proposed and is shown to achieve smooth representation of flow field quantities and their derivatives on immersed interfaces. It is further shown through numerical examples that the proposed clustering method achieves the design order of accuracy and is fairly insensitive to the cluster size. Results are presented for canonical flow past a single cylinder and a sphere at different flow Reynolds numbers to verify the accuracy of the scheme. Investigations are then performed for flow over two staggered cylinders and the results are compared with prior data for the same configuration. All the simulations are carried out with both quadratic and cubic reconstruction, and the results indicate a clear improvement with the cubic reconstruction. The new cut-cell approach with cell clustering is able to predict accurate results even at relatively low resolutions. The ability of the high-order cut-cell method in handling sharp geometrical corners and narrow gaps is also demonstrated using various examples. Finally, three-dimensional flow interactions between a pair of spheres in cross flow is investigated using the proposed cut-cell scheme. The results are shown to be in excellent agreement with past studies, which employed body-fitted grids for studying this complex case.

  1. Satellite Alignment. I. Distribution of Substructures and their Dependence on Assembly History from N-body Simulations

    NASA Astrophysics Data System (ADS)

    Wang, Y. O.; Lin, W. P.; Kang, X.; Dutton, Aaron; Yu, Yu; Macciò, Andrea V.

    2014-05-01

    Observations have shown that the spatial distribution of satellite galaxies is not random, but aligned with the major axes of central galaxies. This alignment is dependent on galaxy properties, such that red satellites are more strongly aligned than blue satellites. Theoretical work conducted to interpret this phenomenon has found that it is due to the non-spherical nature of dark matter halos. However, most studies overpredict the alignment signal under the assumption that the central galaxy shape follows the shape of the host halo. It is also not clear whether the color dependence of alignment is due to an assembly bias or an evolution effect. In this paper we study these problems using a cosmological N-body simulation. Subhalos are used to trace the positions of satellite galaxies. It is found that the shapes of dark matter halos are mis-aligned at different radii. If the central galaxy shares the same shape as the inner host halo, then the alignment effect is weaker and agrees with observational data. However, it predicts almost no dependence of alignment on the color of satellite galaxies, though the late accreted subhalos show stronger alignment with the outer layer of the host halo than their early accreted counterparts. We find that this is due to the limitation of pure N-body simulations where satellite galaxies without associated subhalos ("orphan galaxies") are not resolved. These orphan (mostly red) satellites often reside in the inner region of host halos and should follow the shape of the host halo in the inner region.

  2. Interposition Porcine Acellular Dermal Matrix Xenograft Successful Alternative in Treatment for Massive Rotator Cuff

    PubMed Central

    Neumann, Julie; Zgonis, Miltiadis H.; Reay, Kathleen Dolores; Mayer, Stephanie W.; Boggess, Blake; Toth, Alison P.

    2016-01-01

    Objectives: Despite advances in the surgical techniques of rotator cuff repair (RCR), the management of massive rotator cuff tears in shoulders without glenohumeral arthritis poses a difficult problem for surgeons. Failure of massive rotator cuff repairs range from 20-90% at one to two years postoperatively using arthrography, ultrasound, or magnetic resonance imaging. Additionally, there are inconsistent outcomes reported with debridement alone of massive rotator cuff tears as well as limitations seen with other current methods of operative intervention including arthroplasty and tendon transfers. The purpose of this prospective, comparative study was to determine if the repair of massive rotator cuff tears using an interposition porcine acellular dermal matrix xenograft improves subjective function, pain, range of motion, and strength at greater than two years follow-up. To our knowledge, this is the largest prospective series reporting outcomes of using porcine acellular dermal matrix xenograft as an interposition graft. Methods: Thirty-seven patients (37 shoulders) with an average age of 66 years (range 51-80 years) were prospectively followed for 33 months (range 23-48) following massive RCR using porcine acellular dermal matrix interposition xenograft. Subjective outcomes were measured using the Visual Analog Scale (VAS) pain score (0-10, 0 = no pain), Modified American Shoulder and Elbow Score (M-ASES), and Short-Form12 (SF-12) scores. Preoperative and postoperative objective outcome measures included active range of motion and supraspinatus and infraspinatus manual muscle strength. Postoperative outcome measures included quantitative muscle strength using a dynamometer and static and dynamic ultrasonography to assess the integrity of the repair. Results: Average VAS pain score decreased from 4.5 to 1.1 (P<0.001). Average postoperative M-ASES was 89.23. Average postoperative SF-12 was 52.6. Mean forward flexion, external and internal rotation significantly

  3. Computer Simulation Study of Human Locomotion with a Three-Dimensional Entire-Body Neuro-Musculo-Skeletal Model

    NASA Astrophysics Data System (ADS)

    Hase, Kazunori; Yamazaki, Nobutoshi

    A model having a three-dimensional entire-body structure and consisting of both the neuronal system and the musculo-skeletal system was proposed to precisely simulate human walking motion. The dynamics of the human body was represented by a 14-rigid-link system and 60 muscular models. The neuronal system was represented by three sub-systems: the rhythm generator system consisting of 32 neural oscillators, the sensory feedback system, and the peripheral system expressed by static optimization. Unknown neuronal parameters were adjusted by a numerical search method using the evaluative criterion for locomotion that was defined by a hybrid between the locomotive energy efficiency and the smoothness of the muscular tensions. The model could successfully generate continuous and three-dimensional walking patterns and stabilized walking against mechanical perturbation. The walking pattern was more stable than that of the model based on dynamic optimization, and more precise than that of the previous model based on a similar neuronal system.

  4. Structure, corrosion behavior and mechanical property of a novel poly(vinyl alcohol) composite in simulated body fluid.

    PubMed

    Li, Juan; Suo, Jinping; Zou, Peng; Jia, Lintao; Wang, Shifang

    2010-01-01

    The data for long-term drug-delivery systems are scarce compared to the short-term systems because the required research efforts are more time-consuming. In this study, we report a novel cross-linked composite based on poly(vinyl alcohol) (PVA) containing cupric ions for long-term delivery, which is helpful for contraception and trace element balance in the human body. The composition, corrosion products, crystal structure, chemical structure and mechanical stability of the composite, after being immersed in simulated body fluid (SBF) for one year, were studied by X-ray fluorescence spectroscopy (XRF), X-ray diffraction (XRD), differential scanning calorimetry (DSC), Fourier-transform infrared spectroscopy (FT-IR) and mechanical testing. The results show that no other new elements, such as P, Cl and Ca, appear on the surface of the composite and no Cu(2)O was formed after immersion in SBF for one year. The effectiveness of copper can be greatly improved and the side-effects caused by these compounds might also be eliminated. Furthermore, this novel composite exhibits long-term mechanical stability in SBF. The present in vitro long-term data suggest that this novel copper-containing composite may serve as a substitute for conventional materials of copper-containing intrauterine devices (Cu-IUDs) and as a carrier for controlled-release material in a variety of other applications.

  5. Pectus excavatum postsurgical outcome based on preoperative soft body dynamics simulation

    NASA Astrophysics Data System (ADS)

    Moreira, Antonio H. J.; Rodrigues, Pedro L.; Fonseca, Jaime; Pinho, A. C. M.; Rodrigues, Nuno F.; Correia-Pinto, Jorge; Vilaça, João L.

    2012-02-01

    Pectus excavatum is the most common congenital deformity of the anterior chest wall, in which an abnormal formation of the rib cage gives the chest a caved-in or sunken appearance. Today, the surgical correction of this deformity is carried out in children and adults through Nuss technic, which consists in the placement of a prosthetic bar under the sternum and over the ribs. Although this technique has been shown to be safe and reliable, not all patients have achieved adequate cosmetic outcome. This often leads to psychological problems and social stress, before and after the surgical correction. This paper targets this particular problem by presenting a method to predict the patient surgical outcome based on pre-surgical imagiologic information and chest skin dynamic modulation. The proposed approach uses the patient pre-surgical thoracic CT scan and anatomical-surgical references to perform a 3D segmentation of the left ribs, right ribs, sternum and skin. The technique encompasses three steps: a) approximation of the cartilages, between the ribs and the sternum, trough b-spline interpolation; b) a volumetric mass spring model that connects two layers - inner skin layer based on the outer pleura contour and the outer surface skin; and c) displacement of the sternum according to the prosthetic bar position. A dynamic model of the skin around the chest wall region was generated, capable of simulating the effect of the movement of the prosthetic bar along the sternum. The results were compared and validated with patient postsurgical skin surface acquired with Polhemus FastSCAN system.

  6. Simulation and Flight Evaluation of a Parameter Estimation Input Design Method for Hybrid-Wing-Body Aircraft

    NASA Technical Reports Server (NTRS)

    Taylor, Brian R.; Ratnayake, Nalin A.

    2010-01-01

    As part of an effort to improve emissions, noise, and performance of next generation aircraft, it is expected that future aircraft will make use of distributed, multi-objective control effectors in a closed-loop flight control system. Correlation challenges associated with parameter estimation will arise with this expected aircraft configuration. Research presented in this paper focuses on addressing the correlation problem with an appropriate input design technique and validating this technique through simulation and flight test of the X-48B aircraft. The X-48B aircraft is an 8.5 percent-scale hybrid wing body aircraft demonstrator designed by The Boeing Company (Chicago, Illinois, USA), built by Cranfield Aerospace Limited (Cranfield, Bedford, United Kingdom) and flight tested at the National Aeronautics and Space Administration Dryden Flight Research Center (Edwards, California, USA). Based on data from flight test maneuvers performed at Dryden Flight Research Center, aerodynamic parameter estimation was performed using linear regression and output error techniques. An input design technique that uses temporal separation for de-correlation of control surfaces is proposed, and simulation and flight test results are compared with the aerodynamic database. This paper will present a method to determine individual control surface aerodynamic derivatives.

  7. Tribological and corrosion behavior of friction stir processed Ti-CaP nanocomposites in simulated body fluid solution.

    PubMed

    Farnoush, Hamidreza; Abdi Bastami, Ashkan; Sadeghi, Ali; Aghazadeh Mohandesi, Jamshid; Moztarzadeh, Fathollah

    2013-04-01

    In the present study, friction stir processing was utilized to incorporate nano-hydroxyapatite particles into Ti-6Al-4V substrates to fabricate Ti-CaP nanocomposite surface layer. Microstructures of the stir zone and the fabricated Ti-CaP nanocomposite layer were analyzed using optical and scanning electron microscopy, respectively. Microhardness profile and AFM analysis of substrates were then studied. The microhardness of Ti-CaP nanocomposite layer was reached about 386 HV due to the grain refinement and the distribution of nano-hydroxyapatite particles. Potentiodynamic polarization studies showed that the Ti-CaP nanocomposite layer protected effectively the Ti-6Al-4V substrates from corroding in simulated body fluid solution. The tribological properties of the samples were studied in both dry and simulated biological conditions. The wear rate and friction coefficient decreased by friction stir processing on Ti-6Al-4V substrates. From the analysis of plotted graphs of weight loss versus sliding distance, a correlation between wear coefficient and microhardness through thickness was established. The wear mechanisms were also investigated through scanning electron microscopy. It was shown that the major mechanism was abrasive wear.

  8. Corrosion performance of MAO coatings on AZ31 Mg alloy in simulated body fluid vs. Earle's Balance Salt Solution

    NASA Astrophysics Data System (ADS)

    Wilke, Benjamin M.; Zhang, Lei; Li, Weiping; Ning, Chengyun; Chen, Cheng-fu; Gu, Yanhong

    2016-02-01

    Earle's Balance Salt Solution (EBSS) provides an alternative to the conventional simulated body fluids (c-SBF) and has been shown to better simulate the corrosion conditions in vivo. In this work, a series of tests were conducted to explore the corrosion performance of MAO-coated AZ31 samples in EBSS vs. c-SBF. Samples were produced by varying MAO process parameters and then immersed up to 21 days in both EBSS and c-SBF. The corrosion rates were evaluated by the electrochemical impedance spectroscopy and potentiodynamic scanning. Scanning electron microscope (SEM) was used to compare the progression of microcracks across the surface of the coatings. The evaluation of cross-sectional thickness showed an increase in MAO coating thickness with the process voltage. MAO samples with a thicker coating generally have higher impedance and lower current density at the initial immersion time point of 0.5 h. Samples in EBSS showed higher initial impedance and lower current density values as compared to c-SBF counterparts for all process groups. Samples in EBSS demonstrated a much slower corrosion rate than c-SBF samples because of the decreased chloride content and CO2 buffering mechanism of the EBSS.

  9. Towards quantitative control on discreteness error in the non-linear regime of cosmological N-body simulations

    NASA Astrophysics Data System (ADS)

    Joyce, M.; Marcos, B.; Baertschiger, T.

    2009-04-01

    The effects of discreteness arising from the use of the N-body method on the accuracy of simulations of cosmological structure formation are not currently well understood. In the first part of this paper, we discuss the essential question of how the relevant parameters introduced by this discretization should be extrapolated in convergence studies if the goal is to recover the Vlasov-Poisson limit. In the second part of the paper, we study numerically, and with analytical methods developed recently by us, the central issue of how finite particle density affects the precision of results above the force-smoothing scale. In particular, we focus on the precision of results for the power spectrum at wavenumbers around and above the Nyquist wavenumber, in simulations in which the force resolution is taken to be smaller than the initial interparticle spacing. Using simulations of identical theoretical initial conditions sampled on four different `pre-initial' configurations (three different Bravais lattices and a glass), we obtain a lower bound on the real discreteness error. With the guidance of our analytical results, which match extremely well this measured dispersion into the weakly non-linear regime, and of further controlled tests for dependences on the relevant discreteness parameters, we establish with confidence that the measured dispersion is not contaminated either by finite box size effects or by subtle numerical effects. Our results notably show that, at wavenumbers below the Nyquist wavenumber, the dispersion increases monotonically in time throughout the simulation, while the same is true above the Nyquist wavenumber once non-linearity sets in. For normalizations typical of cosmological simulations, we find lower bounds on errors at the Nyquist wavenumber of the order of 1 per cent, and larger above this scale. Our main conclusion is that the only way this error may be reduced below these levels at these physical scales, and indeed convergence to the

  10. Transients from initial conditions based on Lagrangian perturbation theory in N-body simulations II: the effect of the transverse mode

    SciTech Connect

    Tatekawa, Takayuki

    2014-04-01

    We study the initial conditions for cosmological N-body simulations for precision cosmology. In general, Zel'dovich approximation has been applied for the initial conditions of N-body simulations for a long time. These initial conditions provide incorrect higher-order growth. These error caused by setting up the initial conditions by perturbation theory is called transients. We investigated the impact of transient on non-Gaussianity of density field by performing cosmological N-body simulations with initial conditions based on first-, second-, and third-order Lagrangian perturbation theory in previous paper. In this paper, we evaluates the effect of the transverse mode in the third-order Lagrangian perturbation theory for several statistical quantities such as power spectrum and non-Gaussianty. Then we clarified that the effect of the transverse mode in the third-order Lagrangian perturbation theory is quite small.

  11. A comparison of theory and experiment for coupled rotor-body stability of a hingeless rotor model in hover under simulated vacuum conditions

    NASA Technical Reports Server (NTRS)

    Bousman, William G.

    1988-01-01

    Two cases were selected for correlation from an experiment that examined the aeromechanical stability of a small-scale model rotor that used tantalum rods instead of blades to simulate vacuum conditions. The first case involved body roll freedom only while the second case included body pitch and roll degrees of freedom together. Analyses from Hughes Helicopters and the U.S. Army Aeromechanics Laboratory were compared with the data and the correlations ranged from poor to good.

  12. Simulation of gait and gait initiation associated with body oscillating behavior in the gravity environment on the moon, mars and Phobos.

    PubMed

    Brenière, Y

    2001-04-01

    A double-inverted pendulum model of body oscillations in the frontal plane during stepping [Brenière and Ribreau (1998) Biol Cybern 79: 337-345] proposed an equivalent model for studying the body oscillating behavior induced by step frequency in the form of: (1) a kinetic body parameter, the natural body frequency (NBF), which contains gravity and which is invariable for humans, (2) a parametric function of frequency, whose parameter is the NBF, which explicates the amplitude ratio of center of mass to center of foot pressure oscillation, and (3) a function of frequency which simulates the equivalent torque necessary for the control of the head-arms-trunk segment oscillations. Here, this equivalent model is used to simulate the duration of gait initiation, i.e., the duration necessary to initiate and execute the first step of gait in subgravity, as well as to calculate the step frequencies that would impose the same minimum and maximum amplitudes of the oscillating responses of the body center of mass, whatever the gravity value. In particular, this simulation is tested under the subgravity conditions of the Moon, Mars, and Phobos, where gravity is 1/6, 3/8, and 1/1600 times that on the Earth, respectively. More generally, the simulation allows us to establish and discuss the conditions for gait adaptability that result from the biomechanical constraints particular to each gravity system. PMID:11324337

  13. Corrosion and Fretting Corrosion Studies of Medical Grade CoCrMo Alloy in a Clinically Relevant Simulated Body Fluid Environment

    NASA Astrophysics Data System (ADS)

    Ocran, Emmanuel K.; Guenther, Leah E.; Brandt, Jan-M.; Wyss, Urs; Ojo, Olanrewaju A.

    2015-06-01

    In modular hip implants, fretting corrosion at the head/neck and neck/stem interfaces has been identified as a major cause of early revision in hip implants, particularly those with heads larger than 32 mm. It has been found that the type of fluid used to simulate the fretting corrosion of biomedical materials is crucial for the reliability of laboratory tests. Therefore, to properly understand and effectively design against fretting corrosion damage in modular hips, there is the need to replicate the human body environment as closely as possible during in vitro testing. In this work, corrosion and fretting corrosion behavior of CoCrMo in 0.14 M NaCl, phosphate buffered saline, and in a clinically relevant novel simulated body fluid was studied using a variety of electrochemical characterization techniques and tribological experiments. Electrochemical, spectroscopy and tribo-electrochemical techniques employed include Potentiodynamic polarization, Potentiostatic polarization, Electrochemical impedance spectroscopy, X-ray photoelectron spectroscopy, augur electron spectroscopy, inductively coupled plasma mass spectroscopy, and pin-on-disk wear simulation. The presence of phosphate ions in PBS accounted for the higher corrosion rate when compared with 0.14 M NaCl and the clinically relevant novel simulated body fluid. The low corrosion rates and the nature of the protective passive film formed in the clinically relevant simulated body fluid make it suitable for future corrosion and fretting corrosion studies.

  14. Numerical Simulations Of Catastrophic Disruption Of Porous Bodies: Application To Dark-type Asteroids And Kuiper-belt Family Formation

    NASA Astrophysics Data System (ADS)

    Michel, Patrick; Jutzi, M.; Richardson, D. C.; Benz, W.

    2010-10-01

    Asteroids of dark (e.g. C, D) taxonomic classes as well as Kuiper Belt objects and comets are believed to have high porosity, not only in the form of large voids but also in the form of micro-pores. The presence of such microscale porosity introduces additional physics in the impact process. We have enhanced our 3D SPH hydrocode, used to simulate catastrophic breakups, with a model of porosity [1] and validated it at small scale by comparison with impact experiments on pumice targets [2]. Our model is now ready to be applied to a large range of problems. In particular, accounting for the gravitational phase of an impact, we can study the formation of dark-type asteroid families, such as Veritas, and Kuiper-Belt families, such as Haumea. Recently we characterized for the first time the catastrophic impact energy threshold, usually called Q*D, as a function of the target's diameter, porosity, material strength and impact speed [3]. Regarding the mentioned families, our preliminary results show that accounting for porosity leads to different outcomes that may better represent their properties and constrain their definition. In particular, for Veritas, we find that its membership may need some revision [4]. The parameter space is still large, many interesting families need to be investigated and our model will be applied to a large range of cases. PM, MJ and DCR acknowledge financial support from the French Programme National de Planétologie, NASA PG&G "Small Bodies and Planetary Collisions" and NASA under Grant No. NNX08AM39G issued through the Office of Space Science, respectively. [1] Jutzi et al. 2008. Icarus 198, 242-255; [2] Jutzi et al. 2009. Icarus 201, 802-813; [3] Jutzi et al. 2010. Fragment properties at the catastrophic disruption threshold: The effect of the parent body's internal structure, Icarus 207, 54-65; [4] Michel et al. 2010. Icarus, submitted.

  15. From planetesimals to terrestrial planets: N-body simulations including the effects of nebular gas and giant planets

    NASA Astrophysics Data System (ADS)

    Morishima, Ryuji; Stadel, Joachim; Moore, Ben

    2010-06-01

    We present results from a suite of N-body simulations that follow the formation and accretion history of the terrestrial planets using a new parallel treecode that we have developed. We initially place 2000 equal size planetesimals between 0.5 and 4.0 AU and the collisional growth is followed until the completion of planetary accretion (>100 Myr). A total of 64 simulations were carried out to explore sensitivity to the key parameters and initial conditions. All the important effect of gas in laminar disks are taken into account: the aerodynamic gas drag, the disk-planet interaction including Type I migration, and the global disk potential which causes inward migration of secular resonances as the gas dissipates. We vary the initial total mass and spatial distribution of the planetesimals, the time scale of dissipation of nebular gas (which dissipates uniformly in space and exponentially in time), and orbits of Jupiter and Saturn. We end up with 1-5 planets in the terrestrial region. In order to maintain sufficient mass in this region in the presence of Type I migration, the time scale of gas dissipation needs to be 1-2 Myr. The final configurations and collisional histories strongly depend on the orbital eccentricity of Jupiter. If today's eccentricity of Jupiter is used, then most of bodies in the asteroidal region are swept up within the terrestrial region owing to the inward migration of the secular resonance, and giant impacts between protoplanets occur most commonly around 10 Myr. If the orbital eccentricity of Jupiter is close to zero, as suggested in the Nice model, the effect of the secular resonance is negligible and a large amount of mass stays for a long period of time in the asteroidal region. With a circular orbit for Jupiter, giant impacts usually occur around 100 Myr, consistent with the accretion time scale indicated from isotope records. However, we inevitably have an Earth size planet at around 2 AU in this case. It is very difficult to obtain

  16. Modeling of body tissues for Monte Carlo simulation of radiotherapy treatments planned with conventional x-ray CT systems.

    PubMed

    Kanematsu, Nobuyuki; Inaniwa, Taku; Nakao, Minoru

    2016-07-01

    In the conventional procedure for accurate Monte Carlo simulation of radiotherapy, a CT number given to each pixel of a patient image is directly converted to mass density and elemental composition using their respective functions that have been calibrated specifically for the relevant x-ray CT system. We propose an alternative approach that is a conversion in two steps: the first from CT number to density and the second from density to composition. Based on the latest compilation of standard tissues for reference adult male and female phantoms, we sorted the standard tissues into groups by mass density and defined the representative tissues by averaging the material properties per group. With these representative tissues, we formulated polyline relations between mass density and each of the following; electron density, stopping-power ratio and elemental densities. We also revised a procedure of stoichiometric calibration for CT-number conversion and demonstrated the two-step conversion method for a theoretically emulated CT system with hypothetical 80 keV photons. For the standard tissues, high correlation was generally observed between mass density and the other densities excluding those of C and O for the light spongiosa tissues between 1.0 g cm(-3) and 1.1 g cm(-3) occupying 1% of the human body mass. The polylines fitted to the dominant tissues were generally consistent with similar formulations in the literature. The two-step conversion procedure was demonstrated to be practical and will potentially facilitate Monte Carlo simulation for treatment planning and for retrospective analysis of treatment plans with little impact on the management of planning CT systems.

  17. Modeling of body tissues for Monte Carlo simulation of radiotherapy treatments planned with conventional x-ray CT systems.

    PubMed

    Kanematsu, Nobuyuki; Inaniwa, Taku; Nakao, Minoru

    2016-07-01

    In the conventional procedure for accurate Monte Carlo simulation of radiotherapy, a CT number given to each pixel of a patient image is directly converted to mass density and elemental composition using their respective functions that have been calibrated specifically for the relevant x-ray CT system. We propose an alternative approach that is a conversion in two steps: the first from CT number to density and the second from density to composition. Based on the latest compilation of standard tissues for reference adult male and female phantoms, we sorted the standard tissues into groups by mass density and defined the representative tissues by averaging the material properties per group. With these representative tissues, we formulated polyline relations between mass density and each of the following; electron density, stopping-power ratio and elemental densities. We also revised a procedure of stoichiometric calibration for CT-number conversion and demonstrated the two-step conversion method for a theoretically emulated CT system with hypothetical 80 keV photons. For the standard tissues, high correlation was generally observed between mass density and the other densities excluding those of C and O for the light spongiosa tissues between 1.0 g cm(-3) and 1.1 g cm(-3) occupying 1% of the human body mass. The polylines fitted to the dominant tissues were generally consistent with similar formulations in the literature. The two-step conversion procedure was demonstrated to be practical and will potentially facilitate Monte Carlo simulation for treatment planning and for retrospective analysis of treatment plans with little impact on the management of planning CT systems. PMID:27300449

  18. MODELING PLANETARY SYSTEM FORMATION WITH N-BODY SIMULATIONS: ROLE OF GAS DISK AND STATISTICS COMPARED TO OBSERVATIONS

    SciTech Connect

    Liu Huigen; Zhou Jilin; Wang Su

    2011-05-10

    During the late stage of planet formation, when Mars-sized cores appear, interactions among planetary cores can excite their orbital eccentricities, accelerate their merging, and thus sculpt their final orbital architecture. This study contributes to the final assembling of planetary systems with N-body simulations, including the type I or II migration of planets and gas accretion of massive cores in a viscous disk. Statistics on the final distributions of planetary masses, semimajor axes, and eccentricities are derived and are comparable to those of the observed systems. Our simulations predict some new orbital signatures of planetary systems around solar mass stars: 36% of the surviving planets are giant planets (>10 M{sub +}). Most of the massive giant planets (>30 M{sub +}) are located at 1-10 AU. Terrestrial planets are distributed more or less evenly at <1-2 AU. Planets in inner orbits may accumulate at the inner edges of either the protostellar disk (3-5 days) or its magnetorotational instability dead zone (30-50 days). There is a planet desert in the mass-eccentricity diagram, i.e., a lack of planets with masses 0.005-0.08M{sub J} in highly eccentric orbits (e > 0.3-0.4). The average eccentricity ({approx}0.15) of the giant planets (>10 M{sub +}) is greater than that ({approx}0.05) of the terrestrial planets (<10 M{sub +}). A planetary system with more planets tends to have smaller planet masses and orbital eccentricities on average.

  19. Modeling of body tissues for Monte Carlo simulation of radiotherapy treatments planned with conventional x-ray CT systems

    NASA Astrophysics Data System (ADS)

    Kanematsu, Nobuyuki; Inaniwa, Taku; Nakao, Minoru

    2016-07-01

    In the conventional procedure for accurate Monte Carlo simulation of radiotherapy, a CT number given to each pixel of a patient image is directly converted to mass density and elemental composition using their respective functions that have been calibrated specifically for the relevant x-ray CT system. We propose an alternative approach that is a conversion in two steps: the first from CT number to density and the second from density to composition. Based on the latest compilation of standard tissues for reference adult male and female phantoms, we sorted the standard tissues into groups by mass density and defined the representative tissues by averaging the material properties per group. With these representative tissues, we formulated polyline relations between mass density and each of the following; electron density, stopping-power ratio and elemental densities. We also revised a procedure of stoichiometric calibration for CT-number conversion and demonstrated the two-step conversion method for a theoretically emulated CT system with hypothetical 80 keV photons. For the standard tissues, high correlation was generally observed between mass density and the other densities excluding those of C and O for the light spongiosa tissues between 1.0 g cm‑3 and 1.1 g cm‑3 occupying 1% of the human body mass. The polylines fitted to the dominant tissues were generally consistent with similar formulations in the literature. The two-step conversion procedure was demonstrated to be practical and will potentially facilitate Monte Carlo simulation for treatment planning and for retrospective analysis of treatment plans with little impact on the management of planning CT systems.

  20. Modeling of body tissues for Monte Carlo simulation of radiotherapy treatments planned with conventional x-ray CT systems

    NASA Astrophysics Data System (ADS)

    Kanematsu, Nobuyuki; Inaniwa, Taku; Nakao, Minoru

    2016-07-01

    In the conventional procedure for accurate Monte Carlo simulation of radiotherapy, a CT number given to each pixel of a patient image is directly converted to mass density and elemental composition using their respective functions that have been calibrated specifically for the relevant x-ray CT system. We propose an alternative approach that is a conversion in two steps: the first from CT number to density and the second from density to composition. Based on the latest compilation of standard tissues for reference adult male and female phantoms, we sorted the standard tissues into groups by mass density and defined the representative tissues by averaging the material properties per group. With these representative tissues, we formulated polyline relations between mass density and each of the following; electron density, stopping-power ratio and elemental densities. We also revised a procedure of stoichiometric calibration for CT-number conversion and demonstrated the two-step conversion method for a theoretically emulated CT system with hypothetical 80 keV photons. For the standard tissues, high correlation was generally observed between mass density and the other densities excluding those of C and O for the light spongiosa tissues between 1.0 g cm-3 and 1.1 g cm-3 occupying 1% of the human body mass. The polylines fitted to the dominant tissues were generally consistent with similar formulations in the literature. The two-step conversion procedure was demonstrated to be practical and will potentially facilitate Monte Carlo simulation for treatment planning and for retrospective analysis of treatment plans with little impact on the management of planning CT systems.

  1. Effective management of major lower extremity wounds using an acellular regenerative tissue matrix: a pilot study.

    PubMed

    Brigido, Stephen A; Boc, Steven F; Lopez, Ramon C

    2004-01-01

    Wound healing is a significant problem in orthopedics. Graftjacket tissue matrix (Wright Medical Technology, Inc, Arlington, Tenn), a novel acellular regenerative tissue matrix, has been designed to aid wound closure. A prospective, randomized study was initiated to determine the efficacy of this tissue product in wound repair compared with conventional treatment. Lower extremity wounds are refractile to healing in patients with diabetes mellitus. Therefore, researchers used diabetic foot ulcers to evaluate the efficacy of GraftJacket tissue matrix in wound repair. Only a single administration of the tissue matrix was required. After 1 month of treatment, preliminary results demonstrate that this novel tissue matrix promotes faster healing at a statistically significant rate over conventional treatment. Because wounds in this series of patients are deep and circulation around the wound is poor, the preliminary results suggest that this tissue matrix will be applicable to other types of orthopedic wounds.

  2. Gravity related behavior of the acellular slime mold Physarum polycephalum (7-IML-1)

    NASA Technical Reports Server (NTRS)

    Block, I.

    1992-01-01

    The objective of the experiment is to investigate the effect of near weightlessness on a single cell. The test object is the acellular slime mold Physarum polycephalum. This cell is composed of a network of protoplastic strands which perform rhythmic contractions in the minute range. These contractions of the strands' ectoplastic walls generate the force to drive the vigorous shuttle streaming of fluid protoplasm inside the strands (hydrostatic pressure flow). A net transport of protoplasm in one direction determines the direction of the cell's locomotion itself. In this way, gravity modifies the contraction rhythm of the strands, the streaming velocity of protoplasm in the strands, and the direction of locomotion of the whole slime mold (geotaxis). The other parts of this experiment will address the major question of how this cell, which does not possess any specialized gravireceptors, gets the information about the direction of the gravity vector. Details of the experimental setup are given.

  3. Tissue-engineered acellular small diameter long-bypass grafts with neointima-inducing activity.

    PubMed

    Mahara, Atsushi; Somekawa, Shota; Kobayashi, Naoki; Hirano, Yoshiaki; Kimura, Yoshiharu; Fujisato, Toshiya; Yamaoka, Tetsuji

    2015-07-01

    Researchers have attempted to develop efficient antithrombogenic surfaces, and yet small-caliber artificial vascular grafts are still unavailable. Here, we demonstrate the excellent patency of tissue-engineered small-caliber long-bypass grafts measuring 20-30 cm in length and having a 2-mm inner diameter. The inner surface of an acellular ostrich carotid artery was modified with a novel heterobifunctional peptide composed of a collagen-binding region and the integrin α4β1 ligand, REDV. Six grafts were transplanted in the femoral-femoral artery crossover bypass method. Animals were observed for 20 days and received no anticoagulant medication. No thrombogenesis was observed on the luminal surface and five cases were patent. In contrast, all unmodified grafts became occluded, and severe thrombosis was observed. The vascular grafts reported here are the first successful demonstrations of short-term patency at clinically applicable sizes. PMID:25941782

  4. Tetanus-diphtheria-acellular pertussis vaccination of adults in the USA.

    PubMed

    Gidengil, Courtney A; Sandora, Thomas J; Lee, Grace M

    2008-07-01

    Pertussis is an important cause of morbidity and mortality, and its incidence has been increasing in adolescents and adults over the past two decades. Waning immunity in adolescents and adults may be partially responsible. Adults can suffer significant illness from pertussis and its complications, such as pneumonia, rib fractures and syncope. Moreover, adults serve as a source of disease for infants, who are more vulnerable to severe complications and even death. The economic burden of pertussis is substantial, in terms of both medical and nonmedical costs. Fortunately, the burden of pertussis disease can now be safely and effectively reduced by vaccinating adults with tetanus-diphtheria-acellular pertussis (Tdap) vaccine. Further research is needed to elucidate the role of vaccination in pregnant women and those over 65 years of age, and also to determine whether further booster doses of Tdap are needed.

  5. Immune Responses to Pertussis Antigens in Infants and Toddlers after Immunization with Multicomponent Acellular Pertussis Vaccine

    PubMed Central

    Wang, Li; Chen, Qingxia

    2014-01-01

    Given the resurgence of pertussis despite high rates of vaccination with the diphtheria-tetanus-acellular pertussis (DTaP) vaccine, a better understanding of vaccine-induced immune responses to Bordetella pertussis is needed. We investigated the antibody, cell-mediated, and cytokine responses to B. pertussis antigens in children who received the primary vaccination series (at 2, 4, and 6 months) and first booster vaccination (at 15 to 18 months) with 5-component acellular pertussis (aP) vaccine. The majority of subjects demonstrated a 4-fold increase in antibody titer to all four pertussis antigens (pertussis toxin [PT], pertactin [PRN], filamentous hemagglutinin [FHA], and fimbriae [FIM]) following the primary series and booster vaccination. Following the primary vaccine series, the majority of subjects (52 to 67%) mounted a positive T cell proliferative response (stimulation index of ≥3) to the PT and PRN antigens, while few subjects (7 to 12%) mounted positive proliferative responses to FHA and FIM. One month after booster vaccination (age 16 to 19 months), our study revealed significant increase in gamma interferon (IFN-γ) production in response to the PT and FIM antigens, a significant increase in IL-2 production with the PT, FHA, and PRN antigens, and a lack of significant interleukin-4 (IL-4) secretion with any of the antigens. While previous reports documented a mixed Th1/Th2 or Th2-skewed response to DTaP vaccine in children, our data suggest that following the first DTaP booster, children aged 16 to 19 months have a cytokine profile consistent with a Th1 response, which is known to be essential for clearance of pertussis infection. To better define aP-induced immune responses following the booster vaccine, further studies are needed to assess cytokine responses pre- and postbooster in DTaP recipients. PMID:25253666

  6. Is Sterile Better Than Aseptic? Comparing the Microbiology of Acellular Dermal Matrices

    PubMed Central

    Klein, Gabriel M.; Nasser, Ahmed E.; Phillips, Brett T.; Gersch, Robert P.; Fourman, Mitchell S.; Lilo, Sarit E.; Fritz, Jason R.; Khan, Sami U.; Dagum, Alexander B.

    2016-01-01

    Introduction: Postoperative infections are a major complication associated with tissue-expander-based breast reconstruction. The use of acellular dermal matrix (ADM) in this surgery has been identified as a potential reservoir of infection, prompting the development of sterile ADM. Although aseptic and sterile ADMs have been investigated, no study has focused on the occurrence and clinical outcome of bacterial colonization before implantation. Methods: Samples of aseptic AlloDerm, sterile Ready-To-Use AlloDerm, and AlloMax were taken before implantation. These samples were incubated in Tryptic soy broth overnight before being streaked on Trypticase soy agar, MacConkey agar, and 5% blood agar plates for culture and incubated for 48 hours. Culture results were cross-referenced with patient outcomes for 1 year postoperatively. Results: A total of 92 samples of ADM were collected from 63 patients. There were 15 cases of postoperative surgical site infection (16.3%). Only 1 sample of ADM (AlloMax) showed growth of Escherichia coli, which was likely a result of contamination. That patient did not develop any infectious sequelae. Patient outcomes showed no difference in the incidence of seroma or infection between sterile and aseptic ADMs. Conclusions: This study evaluates the microbiology of acellular dermal matrices before use in breast reconstruction. No difference was found in the preoperative bacterial load of either aseptic or sterile ADM. No significant difference was noted in infection or seroma formation. Given these results, we believe aseptic processing used on ADMs is equivalent to sterile processing in our patient cohort in terms of clinical infection and seroma occurrence postoperatively. PMID:27482500

  7. Physiological distal drift in rat molars contributes to acellular cementum formation.

    PubMed

    Tsuchiya, Shinobu; Tsuchiya, Masahiro; Nishioka, Takashi; Suzuki, Osamu; Sasano, Yasuyuki; Igarashi, Kaoru

    2013-08-01

    Occlusal forces may induce the physiological teeth migration in humans, but there is little direct evidence. Rat molars are known to migrate distally during aging, possibly caused by occlusal forces. The purpose of this study was to determine if a reduction in occlusion would decrease teeth migration and affect associated periodontal structures such as cementum. To reduce occlusal forces, the right upper first molar (M1) in juvenile rats was extracted. The transition of the position of upper second molar (M2) and formation of M2 cementum was followed during aging. From the cephalometric analyses, upper M2 was located more anterior compared with the original position with aging after M1 extraction. Associated with this "slowing-down" of the physiological drift, cementum thickness on distal surface, but not on mesial surface, of M2 root was significantly increased. The accumulation of alizarin red as vital stain indicative of calcification, was observed in the distal cementum of M2 root only on the side of M1 extraction. Extraction of M1 that results in less functional loading, distinctly attenuates the physiological drift only in the upper dentition. The decreased physiological drift appears to activate acellular cementum formation only on distal surface of M2 root, perhaps due to reduced mechanical stress associated with the attenuated distal drift. In conclusion, the physiological distal drift in rat molars appears to be largely driven by the occlusal force and also affects the formation of acellular cementum. These findings provide additional direct evidence for an important role of occlusal forces in tooth migration. PMID:23775928

  8. Electrodeposition of HAp coatings on Ti6Al4V alloy and its electrochemical behavior in simulated body fluid solution

    NASA Astrophysics Data System (ADS)

    Thanh Dinh, Thi Mai; Thom Nguyen, Thi; Pham, Thi Nam; Phuong Nguyen, Thu; Thu Trang Nguyen, Thi; Hoang, Thai; Grossin, David; Bertrand, Ghislaine; Drouet, Christophe

    2016-06-01

    Hydroxyapatite (HAp) coatings were prepared on Ti6Al4V substrate by electrodeposition method from electrolyte solution containing Ca(NO3)2, NH4H2PO4 and NaNO3. The results show that the HAp coatings were single phase crystals of HAp. Scanning electron microscope (SEM) images present that HAp/Ti6Al4V have flake shapes which arrange to form like-coral agglomerates. In vitro test of the Ti6Al4V and HAp/Ti6Al4V in simulated body fluid (SBF) solution was investigated with different immersion times. pH of SBF solution decreased and the mass of materials increased. SEM images prove the formation of apatite on the surface of Ti6Al4V and HAp/Ti6Al4V. The corrosion current density during immersion time of substrate is always higher than the one of HAp/Ti6Al4V because the deposited HAp can protect well for the substrate.

  9. Cyclic delamination behavior of plasma-sprayed hydroxyapatite coating on Ti-6Al-4V substrates in simulated body fluid.

    PubMed

    Otsuka, Yuichi; Kawaguchi, Hayato; Mutoh, Yoshiharu

    2016-10-01

    This study aimed to clarify the effect of a simulated body fluid (SBF) on the cyclic delamination behavior of a plasma-sprayed hydroxapatite (HAp) coating. A HAp coating is deposited on the surfaces of surgical metallic materials in order to enhance the bond between human bone and such surfaces. However, the HAp coating is susceptible to delamination by cyclic loading from the patient's gait. Although hip joints are subjected to both positive and negative moments, only the effects of tensile bending stresses on vertical crack propagation behavior have been investigated. Thus, the cyclic delamination behavior of a HAp coating was observed at the stress ratio R=-1 in order to determine the effects of tensile/compressive loading on the delamination behavior. The delamination growth rate increased with SBF immersion, which decreased the delamination life. Raman spectroscopy analysis revealed that the selective phase dissolution in the HAp coating was promoted at interfaces. Finite element analysis revealed that the energy release rate Gmax showed a positive value even in cases with compressive loading, which is a driving force for the delamination of a HAp coating. A prediction model for the delamination growth life was developed that combines a fracture mechanics parameter with the assumed stress-dependent dissolution rate. The predicted delamination life matched the experimental data well in cases of lower stress amplitudes with SBF. PMID:27287152

  10. Tensor3D: A computer graphics program to simulate 3D real-time deformation and visualization of geometric bodies

    NASA Astrophysics Data System (ADS)

    Pallozzi Lavorante, Luca; Dirk Ebert, Hans

    2008-07-01

    Tensor3D is a geometric modeling program with the capacity to simulate and visualize in real-time the deformation, specified through a tensor matrix and applied to triangulated models representing geological bodies. 3D visualization allows the study of deformational processes that are traditionally conducted in 2D, such as simple and pure shears. Besides geometric objects that are immediately available in the program window, the program can read other models from disk, thus being able to import objects created with different open-source or proprietary programs. A strain ellipsoid and a bounding box are simultaneously shown and instantly deformed with the main object. The principal axes of strain are visualized as well to provide graphical information about the orientation of the tensor's normal components. The deformed models can also be saved, retrieved later and deformed again, in order to study different steps of progressive strain, or to make this data available to other programs. The shape of stress ellipsoids and the corresponding Mohr circles defined by any stress tensor can also be represented. The application was written using the Visualization ToolKit, a powerful scientific visualization library in the public domain. This development choice, allied to the use of the Tcl/Tk programming language, which is independent on the host computational platform, makes the program a useful tool for the study of geometric deformations directly in three dimensions in teaching as well as research activities.

  11. In-vitro study of the spontaneous calcification of PHEMA-based hydrogels in simulated body fluid.

    PubMed

    Zainuddin; Hill, D J T; Whittaker, A K; Chirila, T V

    2006-12-01

    In-vitro calcification of poly(2-hydroxyethyl methacrylate) (PHEMA)-based hydrogels in simulated body fluid (SBF) under a steady/batch system without agitation or stirring the solutions has been investigated. It was noted that the formation of calcium phosphate (CaP) deposits primarily proceeded through spontaneous precipitation. The CaP deposits were found both on the surface and inside the hydrogels. It appears that the effect of chemical structure or reducing the relative number of oxygen atoms in the copolymers on the degree of calcification was only important at the early stage of calcification. The morphology of the CaP deposits was observed to be spherical aggregates with a thickness of the CaP layer less than 0.5 microm. Additionally, the CaP deposits were found to be poorly crystalline or to have nano-size crystals, or to exist mostly as an amorphous phase. Characterization of the CaP phases in the deposits revealed that the deposits were comprised mainly of whitlockite [Ca(9)MgH(PO(4))7] type apatite and DCPD (CaHPO4.2H2O) as the precursors of hydroxyapatite [Ca(10)(PO(4))6(OH)2]. The presence of carbonate in the deposits was also detected during the calcification of PHEMA based hydrogels in SBF solution.

  12. Homogeneous hydride formation path in α-Zr: Molecular dynamics simulations with the charge-optimized many-body potential

    DOE PAGES

    Zhang, Yongfeng; Bai, Xian-Ming; Yu, Jianguo; Tonks, Michael R.; Noordhoek, Mark J.; Phillpot, Simon R.

    2016-06-01

    A formation path for homogeneous γ hydride formation in hcp α-Zr, from solid solution to the ζ and then the γ hydride, was demonstrated using molecular static calculations and molecular dynamic simulations with the charge-optimized many-body (COMB) potential. Hydrogen has limited solubility in α-Zr. Once the solubility limit is exceeded, the stability of solid solution gives way to that of coherent hydride phases such as the ζ hydride by planar precipitation of hydrogen. At finite temperatures, the ζ hydride goes through a partial hcp-fcc transformation via 1/3 <1¯100> slip on the basal plane, and transforms into a mixture of γmore » hydride and α-Zr. In the ζ hydride, slip on the basal plane is favored thermodynamically with negligible barrier, and is therefore feasible at finite temperatures without mechanical loading. The transformation process involves slips of three equivalent shear partials, in contrast to that proposed in the literature where only a single shear partial was involved. The adoption of multiple slip partials minimizes the macroscopic shape change of embedded hydride clusters and the shear strain accumulation in the matrix, and thus reduces the overall barrier needed for homogeneous γ hydride formation. In conclusion, this formation path requires finite temperatures for hydrogen diffusion without mechanical loading. Therefore, it should be effective at the cladding operating conditions.« less

  13. On the biodegradation performance of an Mg-Y-RE alloy with various surface conditions in simulated body fluid.

    PubMed

    Hänzi, Anja C; Gunde, Petra; Schinhammer, Michael; Uggowitzer, Peter J

    2009-01-01

    This study documents the influence of different surface conditions produced by various heat treatments on the in vitro degradation performance of an Mg-Y-RE alloy (WE43) investigated by immersion in simulated body fluid. WE43 samples were, respectively (i) annealed at 525 degrees C (plus artificial aging at 250 degrees C in one case) and afterwards polished; and (ii) polished, annealed at 500 degrees C in air and subsequently investigated in the oxidized state. Thermogravimetric analysis (TGA) indicates a mass gain during oxidation in air, following a square-root law over time. X-ray diffraction spectra imply a growing Y(2)O(3) layer upon oxidation, and Auger electron spectroscopy depth profiles show an increased oxide layer thickness which develops according to the behavior observed by TGA. Macroscopically, the degradation performance of the differently heat-treated samples can be divided into two groups. Annealed and polished samples show a fast and homogeneous degradation which slows with time. Their degradation behavior is approximated by a parabolic law. Oxidized samples exhibit a slow initial degradation rate which increases when the protection of the oxide layer is reduced. Overall, they reveal a sigmoidal degradation behavior. Here the differing degradation performances of the annealed-polished and the oxidized samples are related to the different surface conditions and explained on the basis of a depletion hypothesis.

  14. Cyclic delamination behavior of plasma-sprayed hydroxyapatite coating on Ti-6Al-4V substrates in simulated body fluid.

    PubMed

    Otsuka, Yuichi; Kawaguchi, Hayato; Mutoh, Yoshiharu

    2016-10-01

    This study aimed to clarify the effect of a simulated body fluid (SBF) on the cyclic delamination behavior of a plasma-sprayed hydroxapatite (HAp) coating. A HAp coating is deposited on the surfaces of surgical metallic materials in order to enhance the bond between human bone and such surfaces. However, the HAp coating is susceptible to delamination by cyclic loading from the patient's gait. Although hip joints are subjected to both positive and negative moments, only the effects of tensile bending stresses on vertical crack propagation behavior have been investigated. Thus, the cyclic delamination behavior of a HAp coating was observed at the stress ratio R=-1 in order to determine the effects of tensile/compressive loading on the delamination behavior. The delamination growth rate increased with SBF immersion, which decreased the delamination life. Raman spectroscopy analysis revealed that the selective phase dissolution in the HAp coating was promoted at interfaces. Finite element analysis revealed that the energy release rate Gmax showed a positive value even in cases with compressive loading, which is a driving force for the delamination of a HAp coating. A prediction model for the delamination growth life was developed that combines a fracture mechanics parameter with the assumed stress-dependent dissolution rate. The predicted delamination life matched the experimental data well in cases of lower stress amplitudes with SBF.

  15. Opportunities and constraints of presently used thermal manikins for thermo-physiological simulation of the human body.

    PubMed

    Psikuta, Agnes; Kuklane, Kalev; Bogdan, Anna; Havenith, George; Annaheim, Simon; Rossi, René M

    2016-03-01

    Combining the strengths of an advanced mathematical model of human physiology and a thermal manikin is a new paradigm for simulating thermal behaviour of humans. However, the forerunners of such adaptive manikins showed some substantial limitations. This project aimed to determine the opportunities and constraints of the existing thermal manikins when dynamically controlled by a mathematical model of human thermal physiology. Four thermal manikins were selected and evaluated for their heat flux measurement uncertainty including lateral heat flows between manikin body parts and the response of each sector to the frequent change of the set-point temperature typical when using a physiological model for control. In general, all evaluated manikins are suitable for coupling with a physiological model with some recommendations for further improvement of manikin dynamic performance. The proposed methodology is useful to improve the performance of the adaptive manikins and help to provide a reliable and versatile tool for the broad research and development domain of clothing, automotive and building engineering.

  16. Carbonated hydroxyapatite starting from calcite and different orthophosphates under moderate hydrothermal conditions: Synthesis and surface reactivity in simulated body fluid

    SciTech Connect

    Pham Minh, Doan Nzihou, Ange; Sharrock, Patrick

    2014-12-15

    Highlights: • Carbonated apatite (CAP) could be easily obtained from CaCO{sub 3} and orthophosphates. • Highest CaCO{sub 3} dissolution and apatitic carbonate content were obtained with H{sub 3}PO{sub 4}. • A-B-type CAP was formed. • The synthesized CAP was thermally stable up to 1000 °C. • This CAP showed high biomineralization activity before and after thermal treatment. - Abstract: The one-step synthesis of carbonated hydroxyapatite (CAP) using calcite and different orthophosphates was investigated in a closed batch reactor. Only orthophosphoric acid could lead to the complete decomposition of calcite particles, when the reaction temperature was set at 80 °C. On the other hand, the reaction time and the dilution of the initial calcite suspension had no significant influence on the formation of the solid products. CAP was formed as the main crystalline calcium phosphate with the carbonate content in the range of 4.2–4.6 wt.%. The thermal decarbonation of the synthesized CAP started at 750 °C but it was only significant at 1000 °C under air atmosphere. This thermal decarbonation was total at 1200 °C or above. All CAP samples and products following thermal treatments were found bioactive in the test using simulated body fluid (SBF) solution.

  17. Adding disk effects to N-body simulations with REBOUNDx: Application to overstability of resonances in exoplanet pairs

    NASA Astrophysics Data System (ADS)

    Tamayo, Daniel; Rein, Hanno; Chen, Alice; bennett, morgan

    2015-12-01

    Mean-motion resonances (MMRs) are typically stable configurations for pairs of planets. Given that planets should migrate relative to one another in their natal disk, one might expect to have found most planets locked in such MMRs. The fact that most Kepler planets are not observed in MMRs therefore requires an explanation. Goldreich and Schlichting (2014) recently argued that, in fact, due to interactions with the protoplanetary disk, planets below a threshold mass should break out of the strongest MMRs, i.e., the MMRs become overstable.While follow-up work has studied the robustness of this result to varying orbital architectures, we focus on the specific numerical implementation of the disk effects, which translates into differing physical interpretations of the planet-disk interactions. We will present how these physical choices affect the parameter space in which overstability sets in, and how certain choices can generate spurious results. We will then extend our results to general cases of broad applicability, and summarize the merits and pitfalls of these different numerical implementations of perturbations from the protoplanetary disk, particularly in tightly packed systems.We have packaged these numerical implementations into REBOUNDx, an open-source C and Python package for incorporating planet-disk interactions, as well as additional effects (like post-newtonian corrections), into N-body simulations using REBOUND. We will give a brief demo that highlights its ease of installation and use, as well as its synergy with Python's powerful plotting and scientific analysis libraries.

  18. Opportunities and constraints of presently used thermal manikins for thermo-physiological simulation of the human body

    NASA Astrophysics Data System (ADS)

    Psikuta, Agnes; Kuklane, Kalev; Bogdan, Anna; Havenith, George; Annaheim, Simon; Rossi, René M.

    2016-03-01

    Combining the strengths of an advanced mathematical model of human physiology and a thermal manikin is a new paradigm for simulating thermal behaviour of humans. However, the forerunners of such adaptive manikins showed some substantial limitations. This project aimed to determine the opportunities and constraints of the existing thermal manikins when dynamically controlled by a mathematical model of human thermal physiology. Four thermal manikins were selected and evaluated for their heat flux measurement uncertainty including lateral heat flows between manikin body parts and the response of each sector to the frequent change of the set-point temperature typical when using a physiological model for control. In general, all evaluated manikins are suitable for coupling with a physiological model with some recommendations for further improvement of manikin dynamic performance. The proposed methodology is useful to improve the performance of the adaptive manikins and help to provide a reliable and versatile tool for the broad research and development domain of clothing, automotive and building engineering.

  19. Large Eddy Simulations of forced ignition of a non-premixed bluff-body methane flame with Conditional Moment Closure

    SciTech Connect

    Triantafyllidis, A.; Mastorakos, E.; Eggels, R.L.G.M.

    2009-12-15

    Large Eddy Simulations (LES) of forced ignition of a bluff-body stabilised non-premixed methane flame using the Conditional Moment Closure (CMC) turbulent combustion model have been performed. The aim is to investigate the feasibility of the use of CMC/LES for ignition problems and to examine which, if any, of the characteristics already observed in related experiments could be predicted. A three-dimensional formulation of the CMC equation was used with simple and detailed chemical mechanisms, and sparks with different parameters (location, size) were used. It was found that the correct pattern of flame expansion and overall flame appearance were predicted with reasonable accuracy with both mechanisms, but the detailed mechanism resulted in expansion rates closer to the experiment. Moreover, the distribution of OH was predicted qualitatively accurately, with patches of high and low concentration in the recirculation zone during the ignition transient, consistent with experimental data. The location of the spark relative to the recirculation zone was found to determine the pattern of the flame propagation and the total time for the flame stabilisation. The size was also an important parameter, since it was found that the flame extinguishes when the spark is very small, in agreement with expectations from experiment. The stabilisation mechanism of the flame was dominated by the convection and sub-grid scale diffusion of hot combustion products from the recirculation zone to the cold gases that enter the burner, as revealed by analysis of the CMC equation. (author)

  20. Hydrothermal calcium modification of 316L stainless steel and its apatite forming ability in simulated body fluid.

    PubMed

    Valanezahad, Alireza; Ishikawa, Kunio; Tsuru, Kanji; Maruta, Michito; Matsuya, Shigeki

    2011-01-01

    To understand the feasibility of calcium (Ca) modification of type 316L stainless steel (316L SS) surface using hydrothermal treatment, 316L SS plates were treated hydrothermally in calcium chloride (CaCl(2)) solution. X-ray photoelectron spectroscopic analysis revealed that the surface of 316L SS plate was modified with Ca after hydrothermal treatment at 200°C. And the immobilized Ca increased with CaCl(2) concentration. However no Ca-modification was occurred for 316L SS plates treated at 100°C. When Ca-modified 316L SS plate was immersed in simulated body fluid (SBF) with ion concentrations nearly equal to those of human blood plasma, low crystalline apatite was precipitated on its surface whereas no precipitate was observed on non Ca-modified 316L SS. The results obtained in the present study indicated that hydrothermal treatment at 200°C in CaCl(2) solution is useful for Ca-modification of 316L SS, and Ca-modification plays important role for apatite precipitation in SBF.