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Sample records for acidic tundra mat

  1. The Contribution of Moss to Plot-Based Spectral Signals in Moist Acidic Low Arctic Tundra

    NASA Astrophysics Data System (ADS)

    May, J. L.; Beamish, A. L.

    2015-12-01

    To determine the contribution of moss to peak season normalized difference index (NDVI) field measurement of intact vegetation communities were compared to communities with individual species and litter successively removed until only the moss layer remained. Spectral measurements (n=3) were collected using a field radiometer in five upland and five lowland plots in a moist acidic tundra ecosystem at the Imnaviat Creek Watershed, North Slope Alaska. After spectral measurements were taken individual species were removed in the same order in each plot by clipping them at the moss layer. As individual species were removed NDVI values decreased. Decreases were greatest when dwarf shrub species Salix richardsonii sb. pulchra and Betula nana were removed. Notable increases in NDVI were observed once standing litter was removed. The NDVI values of the moss layer were comparable to intact vegetation communities depending on the bryophyte species composition. This suggests that the NDVI signal of moss is largely masked by vascular species but represents a significant factor missing from overall, large-scale NDVI signals. The results of this study corroborate recent data that points to the mismatch between ground based NDVI and aerial and satellite derived NDVI. This preliminary case study provides a strong basis for better characterization of the contribution of moss to NDVI for improved correction of air and space borne imagery.

  2. Complexation of Hg (II) ions with humic acids of tundra soils

    NASA Astrophysics Data System (ADS)

    Vasilevich, Roman

    2013-04-01

    Humic acids (HA) play an important role in processes of heavy metals migration, controlling their geochemical streams in environment. Accumulative and detoxification abilities of HA to heavy metals are realized by means of formation of steady complexes salycylate and pyrocatechin types. Modern researches show that HA of the Arctic and Subarctic areas are poorly enriched by aromatic frames, so and metalbinding centres. The work purpose is to study interaction mechanisms of Hg (II) ions with HA and to define tread possibilities of a tundra soils humic acids. It is established that binding ability of Hg (II) ions depends on concentration of an element, on quantity of functional groups in peripheral and nuclear parts of HA molecule as well as on a solution pH. coomplexation proceeds at pH 2.5-3.5 efficiently. On the basis of kinetic models it is shown that HA interaction with Hg (II) ions, at microconcentration of a pollutant (0.025-5.0 mkmol/dm3), has a zero order of reaction. Rate of a reaction does not depend on initial components concentration and is defined by process of Hg (II) ions diffusion to organic ligands. High correlation of a HA sorption capacity to Hg (II) ions is observed: with the nitrogen content and maintenance of amino groups (according to a 13C-NMR, element composition) and negative correlation - with degree of HA aromaticity. It testifies to primary binding of Hg (II) ions by amino-acid fragments of a HA molecule peripheral part. When concentration of Hg (II) ions increases, binding proceeds on carboxylic and phenolic groups of a molecule nuclear part. Higher order of kinetic models reaction and FTIR spectroscopy data testify to it. Comparison of FTIR spectra of HA preparations and mercury humates, shows that Hg (II) ions binding in humate complexes is carried out mainly by -COOH. Reduction of a spectral line intensity not ionized -COOH at 1700-1720 sm-1 and intensity increases of dissymetric valency vibration at 1610-1650 sm-1 diagnose increase

  3. Assembly and Succession of Iron Oxide Microbial Mat Communities in Acidic Geothermal Springs

    SciTech Connect

    Beam, Jake; Bernstein, Hans C.; Jay, Z.; Kozubal, Mark; Jennings, Ryan; Tringe, Susannah G.; Inskeep, William P.

    2016-02-15

    Iron oxide microbial mats are ubiquitous geobiological features on Earth and occur in extant acidic hot springs of Yellowstone National Park (YNP), WY, USA, and form as a result of microbial processes. The relative contribution of different organisms to the development of these mat ecosystems is of specific interest. We hypothesized that chemolithoautotrophic organisms contribute to the early development and production of Fe(III)-oxide mats, which could support later-colonizing heterotrophic microorganisms. Sterile glass slides were incubated in the outflow channels of two acidic geothermal springs in YNP, and spatiotemporal changes in Fe(III)-oxide accretion and abundance of relevant community members were measured. Lithoautotrophic Hydrogenobaculum spp. were first colonizers and the most abundant taxa identified during early successional stages (7 – 40 days). Populations of M. yellowstonensis colonized after ~ 7 days, corresponding to visible Fe(III)-oxide accretion. Heterotrophic archaea colonized after 30 days, and emerge as the dominant functional guild in mature iron oxide mats (1 – 2 cm thick) that form after 70 – 120 days. First-order rate constants of iron oxide accretion ranged from 0.05 – 0.046 day-1, and reflected the absolute amount of iron accreted. Micro- and macroscale microterracettes were identified during iron oxide mat development, and suggest that the mass transfer of oxygen limits microbial growth. This was also demonstrated using microelectrode measurements of oxygen as a function of mat depth, which showed steep gradients in oxygen from the aqueous mat interface to ~ 1 mm. The formation and succession of amorphous Fe(III)-oxide mat communities follows a predictable pattern of distinct stages and growth. The successional stages and microbial signatures observed in these extant Fe(III)-oxide mat communities may be relevant to other past or present Fe(III)-oxide mineralizing systems.

  4. Dry deposition of ammonia, nitric acid, ammonium, and nitrate to alpine tundra at Niwot Ridge, Colorado

    USGS Publications Warehouse

    Rattray, G.; Sievering, H.

    2001-01-01

    Micrometeorological measurements and ambient air samples, analyzed for concentrations of NH3, HNO3, NH4+, and NO3-, were collected at an alpine tundra site on Niwot Ridge, Colorado. The measured concentrations were extremely low and ranged between 5 and 70ngNm-3. Dry deposition fluxes of these atmospheric species were calculated using the micrometeorological gradient method. The calculated mean flux for NH3 indicates a net deposition to the surface and indicates that NH3 contributed significantly to the total N deposition to the tundra during the August-September measurement period. Our pre-measurement estimate of the compensation point for NH3 in air above the tundra was 100-200ngNm-3; thus, a net emission of NH3 was expected given the low ambient concentrations of NH3 observed. Based on our results, however, the NH3 compensation point at this alpine tundra site appears to have been at or below about 20ngNm-3. Large deposition velocities (>2cms-1) were determined for nitrate and ammonium and may result from reactions with surface-derived aerosols. Copyright (C) 2001 Elsevier Science B.V.Micrometeorological measurements and ambient air samples, analyzed for concentrations of NH3, HNO3, NH4+, and NO3-, were collected at an alpine tundra site on Niwot Ridge, Colorado. The measured concentrations were extremely low and ranged between 5 and 70 ng N m-3. Dry deposition fluxes of these atmospheric species were calculated using the micrometeorological gradient method. The calculated mean flux for NH3 indicates a net deposition to the surface and indicates that NH3 contributed significantly to the total N deposition to the tundra during the August-September measurement period. Our pre-measurement estimate of the compensation point for NH3 in air above the tundra was 100-200 ng N m-3; thus, a net emission of NH3 was expected given the low ambient concentrations of NH3 observed. Based on our results, however, the NH3 compensation point at this alpine tundra site appears to

  5. Assembly and Succession of Iron Oxide Microbial Mat Communities in Acidic Geothermal Springs.

    PubMed

    Beam, Jacob P; Bernstein, Hans C; Jay, Zackary J; Kozubal, Mark A; Jennings, Ryan deM; Tringe, Susannah G; Inskeep, William P

    2016-01-01

    Biomineralized ferric oxide microbial mats are ubiquitous features on Earth, are common in hot springs of Yellowstone National Park (YNP, WY, USA), and form due to direct interaction between microbial and physicochemical processes. The overall goal of this study was to determine the contribution of different community members to the assembly and succession of acidic high-temperature Fe(III)-oxide mat ecosystems. Spatial and temporal changes in Fe(III)-oxide accretion and the abundance of relevant community members were monitored over 70 days using sterile glass microscope slides incubated in the outflow channels of two acidic geothermal springs (pH = 3-3.5; temperature = 68-75°C) in YNP. Hydrogenobaculum spp. were the most abundant taxon identified during early successional stages (4-40 days), and have been shown to oxidize arsenite, sulfide, and hydrogen coupled to oxygen reduction. Iron-oxidizing populations of Metallosphaera yellowstonensis were detected within 4 days, and reached steady-state levels within 14-30 days, corresponding to visible Fe(III)-oxide accretion. Heterotrophic archaea colonized near 30 days, and emerged as the dominant functional guild after 70 days and in mature Fe(III)-oxide mats (1-2 cm thick). First-order rate constants of Fe(III)-oxide accretion ranged from 0.046 to 0.05 day(-1), and in situ microelectrode measurements showed that the oxidation of Fe(II) is limited by the diffusion of O2 into the Fe(III)-oxide mat. The formation of microterracettes also implicated O2 as a major variable controlling microbial growth and subsequent mat morphology. The assembly and succession of Fe(III)-oxide mat communities follows a repeatable pattern of colonization by lithoautotrophic organisms, and the subsequent growth of diverse organoheterotrophs. The unique geochemical signatures and micromorphology of extant biomineralized Fe(III)-oxide mats are also useful for understanding other Fe(II)-oxidizing systems.

  6. Assembly and Succession of Iron Oxide Microbial Mat Communities in Acidic Geothermal Springs

    PubMed Central

    Beam, Jacob P.; Bernstein, Hans C.; Jay, Zackary J.; Kozubal, Mark A.; Jennings, Ryan deM.; Tringe, Susannah G.; Inskeep, William P.

    2016-01-01

    Biomineralized ferric oxide microbial mats are ubiquitous features on Earth, are common in hot springs of Yellowstone National Park (YNP, WY, USA), and form due to direct interaction between microbial and physicochemical processes. The overall goal of this study was to determine the contribution of different community members to the assembly and succession of acidic high-temperature Fe(III)-oxide mat ecosystems. Spatial and temporal changes in Fe(III)-oxide accretion and the abundance of relevant community members were monitored over 70 days using sterile glass microscope slides incubated in the outflow channels of two acidic geothermal springs (pH = 3–3.5; temperature = 68–75°C) in YNP. Hydrogenobaculum spp. were the most abundant taxon identified during early successional stages (4–40 days), and have been shown to oxidize arsenite, sulfide, and hydrogen coupled to oxygen reduction. Iron-oxidizing populations of Metallosphaera yellowstonensis were detected within 4 days, and reached steady-state levels within 14–30 days, corresponding to visible Fe(III)-oxide accretion. Heterotrophic archaea colonized near 30 days, and emerged as the dominant functional guild after 70 days and in mature Fe(III)-oxide mats (1–2 cm thick). First-order rate constants of Fe(III)-oxide accretion ranged from 0.046 to 0.05 day−1, and in situ microelectrode measurements showed that the oxidation of Fe(II) is limited by the diffusion of O2 into the Fe(III)-oxide mat. The formation of microterracettes also implicated O2 as a major variable controlling microbial growth and subsequent mat morphology. The assembly and succession of Fe(III)-oxide mat communities follows a repeatable pattern of colonization by lithoautotrophic organisms, and the subsequent growth of diverse organoheterotrophs. The unique geochemical signatures and micromorphology of extant biomineralized Fe(III)-oxide mats are also useful for understanding other Fe(II)-oxidizing systems. PMID:26913020

  7. Tundra plant uptake of amino acid and NH{sub 4}{sup +} nitrogen in situ: Plants compete well for amino acid N{sup 1}

    SciTech Connect

    Schimel, J.P.; Chapin, F.S. III

    1996-10-01

    Traditional models of nutrient cycling assume that soil microorganisms must decompose organic matter, releasing inorganic N, to make N available to plants. Several lines of evidence have raised doubts about this assumption in arctic tundra, but no firm evidence existed. Here we demonstrate that Eriophorum vaginatum and Carex aquatilis, two tundra sedges, compete well for glycine and asparate N relative to NH{sub 4}{sup +} in situ. At relatively high concentrations (25 {mu}g N/g soil), during the peak of the season, E. vaginatum took up amino acid N more rapidly than NH{sub 4}{sup +}, while later in the season and at lower concentrations (2-4 {mu}g N/g soil) both E. vaginatum and C. aqualtilis took up glycine N and NH{sub 4}{sup +} at similar rates. These results are incompatible with a simple mechanism of amino acid mineralization followed by plant uptake of the released N. These results indicate that these tundra plants have active mechanisms for enhancing their access to amino acid N in situ. 18 refs., 4 tabs.

  8. Influence of BRDF on NDVI and biomass estimations of Alaska Arctic tundra

    NASA Astrophysics Data System (ADS)

    Buchhorn, Marcel; Raynolds, Martha K.; Walker, Donald A.

    2016-12-01

    Satellites provide the only practical source of data for estimating biomass of large and remote areas such as the Alaskan Arctic. Researchers have found that the normalized difference vegetation index (NDVI) correlates well with biomass sampled on the ground. However, errors in NDVI and biomass estimates due to bidirectional reflectance distribution function (BRDF) effects are not well reported in the literature. Sun-sensor-object geometries and sensor band-width affect the BRDF, and formulas relating NDVI to ground-sampled biomass vary between projects. We examined the effects of these different variables on five studies that estimated above-ground tundra biomass of two common arctic vegetation types that dominate the Alaska tundra, moist acidic tussock tundra (MAT) and moist non-acidic tundra (MNT). We found that biomass estimates were up to 33% (excluding extremes) more sensitive than NDVI to BRDF effects. Variation between the sensors resulted in differences in NDVI of under 3% over all viewing geometries, and wider bands were more stable in their biomass estimates than narrow bands. MAT was more sensitive than MNT to BRDF effects due to irregularities in surface reflectance created by the tussocks. Finally, we found that studies that sampled only a narrow range of biomass and NDVI produced equations that were more difficult to correct for BRDF effects.

  9. Seasonal variation in soil nitrogen availability across a fertilization chronosequence in moist acidic tundra

    NASA Astrophysics Data System (ADS)

    McLaren, J. R.; Gough, L.; Weintraub, M. N.

    2012-12-01

    Changes in global climate may result in altered timing of seasonal events including the timing of the spring-thaw and fall freeze-up. In addition to this changing seasonality, arctic environments are experiencing overall increases in nutrient availability caused by climate warming resulting in alterations of plant species composition, such as the observed increases in the abundance of deciduous shrubs. Changing species composition may have large effects on nutrient dynamics in the surrounding ecosystem because of documented differences in how particular plant species influence soil nutrient availability. Although we have some idea of how plant identity influences soil nutrients, soil biogeochemical processes are strongly seasonal, and we have a poor understanding of how plant identity, or nutrient levels, may influence these seasonal patterns. We examined the responses of moist acidic tundra to experimentally increased soil nutrient availability and the accompanying increase in shrub abundance at the Arctic Long Term Ecological Research (LTER) site at Toolik Lake, Alaska. We examined a chrono-sequence of long-term fertilization experiments, composed of experiments fertilized for 5, 15 and 22 years, which has resulted in increasing shrub density with time since fertilization. The fertilized plots receive both nitrogen (N, 10 g/m2/yr) and phosphorus (5 g/m2/yr) annually following snowmelt. In the 2011 growing season we measured variation in soil available N weekly, including measures of ammonium (NH4), nitrate (NO3) and total free amino acids (TFAA). We found that differences between fertilized and control plots depended strongly on both the seasonal timing of measurements, as well as the duration of the fertilization treatment. Early in the growing season fertilization resulted in large increases in available soil N (both NH4 and NO3) across the entire chronosequence. As the season progressed, however, older fertilized plots show evidence of N saturation, where

  10. Interactions between spring temperatures and snow cover alter plant-soil nutrient feedbacks in moist acidic arctic tundra

    NASA Astrophysics Data System (ADS)

    Weintraub, M. N.; Steltzer, H.; Sullivan, P.; Darrouzet-Nardi, A.; Schimel, J.; Wallenstein, M. D.; Livensperger, C.; Segal, A. D.

    2012-12-01

    A significant spring warming trend has been observed across the arctic, resulting in higher spring temperatures and earlier snowmelt. These climate changes have the potential to alter arctic soil carbon (C) and nitrogen (N) dynamics because they can significantly influence both plant growth and decomposition during the growing season. These changes are of particular concern because arctic tundra soils contain large stores of C and may act as a significant CO2 source with warming. To determine how changes in the timing of snowmelt and higher spring temperatures affect plant growth and soil nutrient dynamics, we conducted a factorial accelerated snowmelt and warming experiment in a moist acidic tundra plant community in the Alaskan arctic. We measured changes plant phenology and growth, and soil nutrient dynamics in response to these manipulations to determine the implications of earlier snowmelt and warming. We hypothesized that accelerated snowmelt would allow plants to start growing earlier, resulting in earlier root growth and plant N uptake from these nutrient poor soils, potentially exacerbating N limitation to decomposer microorganisms and reducing their activities. Contrary to our predictions, we observed delayed and reduced root growth in response to accelerated snowmelt, without similar reductions in aboveground productivity. We also found that warming in combination with accelerated snowmelt alleviated the inhibition of root growth, suggesting that low air temperatures following snowmelt may have inhibited plant growth, as plants were unprotected from swings in air temperature without the insulating snowpack. Furthermore, we found that greater root growth was associated with elevated, not reduced, soil N availability, which was also opposite to our predictions. These results suggest that C-rich root exudates stimulate microbial N acquisition and can actually increase N availability even as roots and microbes are taking up more N. This implies that as long

  11. Distribution of Major Chlorogenic Acids and Related Compounds in Brazilian Green and Toasted Ilex paraguariensis (Maté) Leaves.

    PubMed

    Lima, Juliana de Paula; Farah, Adriana; King, Benjamin; de Paulis, Tomas; Martin, Peter R

    2016-03-23

    Ilex paraguariensis (maté) is one of the best sources of chlorogenic acids (CGA) in nature. When leaves are toasted, some isomers are partly transformed into 1,5-γ-quinolactones (CGL). Both CGA and CGL are important contributors to the brew's flavor and are thought to contribute to human health. In this study, we quantified 9 CGA, 2 CGL, and caffeic acid in 20 samples of dried green and toasted maté that are commercially available in Brazil. Total CGA content in green maté varied from 8.7 to 13.2 g/100 g, dry weight (dw). Caffeic acid content varied from 10.8 to 13.5 mg/100 g dw, respectively. Content in toasted maté varied from 1.5 to 4.6 g/100 g and from 1.5 to 7.2 mg/100 g dw, respectively. Overall, caffeoylquinic acid isomers (CQA) were the most abundant CGA in both green and toasted maté, followed by dicaffeoylquinic acids (diCQA) and feruloylquinic acids (FQA). These classes accounted for 58.5%, 40.0%, and 1.5% of CGA, respectively, in green maté and 76.3%, 20.7%, and 3.0%, respectively, in toasted maté. Average contents of 3-caffeoylquinolactone (3-CQL) and 4-caffeoylquinolactone (4-CQL) in commercial toasted samples were 101.5 mg/100 g and 61.8 mg/100 g dw, respectively. These results show that, despite overall losses during the toasting process, CGA concentrations are still substantial in toasted leaves, compared to other food sources of CGA and phenolic compounds in general. In addition to evaluating commercial samples, investigation of changes in CGA profile and formation of 1,5-γ-quinolactones was performed in experimental maté toasting.

  12. Spectral indices for remote sensing of phytomass and deciduous shrub changes in Alaskan arctic tundra

    NASA Astrophysics Data System (ADS)

    Kushida, K.; Hobara, S.; Tsuyuzaki, S.; Watanabe, M.; Harada, K.; Kim, Y.; Shaver, G. R.; Fukuda, M.

    2010-12-01

    The relationships between spectral indices, phytomass, and plant functional types were determined by using field observations of a moist acidic tundra (MAT) and a moist non-acidic tundra (MNT) in the Toolik Lake Long Term Ecological Research (LTER) site and a sedge-shrub tundra (SS) in the Arctic National Wildlife Refuge, Alaska, USA. For the MAT and MNT observations, among aboveground phytomass, aboveground vascular phytomass, and vascular plant green phytomass, vascular plant green phytomass was the most sensitive to an exponential function of the normalized difference vegetation index (NDVI). The coefficient of determination (R2) was 0.73. Vascular plant carbon and nitrogen were estimated with exponential functions of NDVI (R2 of 0.57 and 0.53, respectively). For the MAT, MNT, and SS observations, vascular plant green phytomass was more strongly correlated with an exponential function of NDVI (ENDVI, R2 of 0.62) than any other spectral indices. On the other hand, for deciduous shrub green phytomass, the strongest correlation was with a product of an exponential function of NDVI and a spectral index (MIR - RED)/(MIR + RED) (DSSI, R2 of 0.60). Here, MIR and RED denote the bands with wavelengths 2.09-2.35 and 0.63-0.69 µm, respectively. As a result of a regression analysis, 41% of the ENDVI variance and 60% of the DSSI variance were explained by deciduous shrub green phytomass. Up to 38% of the ENDVI variance and up to 10% of the DSSI variance were explained by green phytomass of evergreen shrubs and graminoids, and phytomass of mosses/lichens. These spectral indices were applicable to evaluating tundra plant community changes.

  13. Evaluation of gallic acid loaded zein sub-micron electrospun fibre mats as novel active packaging materials.

    PubMed

    Neo, Yun Ping; Swift, Simon; Ray, Sudip; Gizdavic-Nikolaidis, Marija; Jin, Jianyong; Perera, Conrad O

    2013-12-01

    The applicability of gallic acid loaded zein (Ze-GA) electrospun fibre mats towards potential active food packaging material was evaluated. The surface chemistry of the electrospun fibre mats was determined using X-ray photon spectroscopy (XPS). The electrospun fibre mats showed low water activity and whitish colour. Thermogravimetric analysis (TGA) and Attenuated Total Reflectance-Fourier Transform Infrared (ATR-FTIR) spectroscopy revealed the stability of the fibre mats over time. The Ze-GA fibre mats displayed similar rapid release profiles, with Ze-GA 20% exhibiting the fastest release rate in water as compared to the others. Gallic acid diffuses from the electrospun fibres in a Fickian diffusion manner and the data obtained exhibited a better fit to Higuchi model. L929 fibroblast cells were cultured on the electrospun fibres to demonstrate the absence of cytotoxicity. Overall, the Ze-GA fibre mats demonstrated antibacterial activity and properties consistent with those considered desirable for active packaging material in the food industry.

  14. Differential ecophysiological response of deciduous shrubs and a graminoid to long-term experimental snow reductions and additions in moist acidic tundra, Northern Alaska.

    PubMed

    Pattison, Robert R; Welker, Jeffrey M

    2014-02-01

    Changes in winter precipitation that include both decreases and increases in winter snow are underway across the Arctic. In this study, we used a 14-year experiment that has increased and decreased winter snow in the moist acidic tussock tundra of northern Alaska to understand impacts of variation in winter snow depth on summer leaf-level ecophysiology of two deciduous shrubs and a graminoid species, including: instantaneous rates of leaf gas exchange, and δ(13)C, δ(15)N, and nitrogen (N) concentrations of Betula nana, Salix pulchra, and Eriophorum vaginatum. Leaf-level measurements were complemented by measurements of canopy leaf area index (LAI) and depth of thaw. Reductions in snow lowered summer leaf photosynthesis, conductance, and transpiration rates by up to 40% compared to ambient and deep snow conditions for Eriophorum vaginatum, and reduced Salix pulchra conductance and transpiration by up to 49%. In contrast, Betula nana exhibited no changes in leaf gas exchange in response to lower or deeper snow. Canopy LAI increased with added snow, while reduced winter snow resulted in lower growing season soil temperatures and reduced thaw depths. Our findings indicate that the spatial and temporal variability of future snow depth will have individualistic consequences for leaf-level C fixation and water flux by tundra species, and that these responses will be manifested over the longer term by changes in canopy traits, depth of thaw, soil C and N processes, and trace gas (CO2 and H2O) exchanges between the tundra and the atmosphere.

  15. Acidisoma tundrae gen. nov., sp. nov. and Acidisoma sibiricum sp. nov., two acidophilic, psychrotolerant members of the Alphaproteobacteria from acidic northern wetlands.

    PubMed

    Belova, Svetlana E; Pankratov, Timofei A; Detkova, Ekaterina N; Kaparullina, Elena N; Dedysh, Svetlana N

    2009-09-01

    Three obligately aerobic, heterotrophic bacteria, designated strains WM1T, TPB606T and TPB621, were isolated from acidic Sphagnum-dominated tundra and Siberian wetlands in Russia. Cells of these isolates were Gram-negative, non-motile coccobacilli that occurred singly, in pairs or in chains, and were covered by large capsules. The novel strains were moderately acidophilic and psychrotolerant organisms capable of growth at pH 3.0-7.6 and 2-30 degrees C. Cells contained numerous intracellular poly-beta-hydroxybutyrate granules (3-4 per cell). The major cellular fatty acid was cyclo C19:0omega8c and the predominant quinone was Q-10. Strains TPB606T and TPB621, isolated from Siberian wetland, possessed almost identical 16S rRNA gene sequences and shared 97.2% sequence similarity with tundra strain WM1T. The three strains were shown to belong to the Alphaproteobacteria, but were related only distantly to the type strains of acidophilic bacteria Acidisphaera rubrifaciens (93.4-94.3% 16S rRNA gene sequence similarity), Rhodopila globiformis (92.2-93.3%), and members of the genera Acidiphilium (91.3-93%) and Acidocella (91.8-92.4%). The DNA G+C contents of the novel strains were 60.5-61.9 mol%. The low levels of DNA-DNA relatedness (37%) and a number of phenotypic differences between the Siberian strains TPB606T and TPB621 and the tundra strain WM1T indicated that they represent two separate species. As the three isolates are clearly distinct from all recognized acidophilic members of the Alphaproteobacteria, they are considered to represent two novel species of a new genus, for which the names Acidisoma tundrae gen. nov., sp. nov. and Acidisoma sibiricum sp. nov. are proposed. The type strain of Acidisoma sibiricum is TPB606T (=DSM 21000T=VKM B-2487T) and the type strain of Acidisoma tundrae is WM1T (=DSM 19999T=VKM B-2488T).

  16. MAT1A variants modulate the effect of dietary fatty acids on plasma homocysteine concentrations and DNA damage

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Dietary n-3 polyunsaturated fatty acids (PUFA) are associated with decreased plasma homocysteine (Hcy), an important biomarker for cardiovascular disease. Methionine adenosyltransferase (MAT1A) is an enzyme involved in formation of form S-adenosylmethionine during methionine metabolism. The objectiv...

  17. Characterization of humic acids from tundra soils of northern Western Siberia by electron paramagnetic resonance spectroscopy

    NASA Astrophysics Data System (ADS)

    Chukov, S. N.; Ejarque, E.; Abakumov, E. V.

    2017-01-01

    Humic acids from polar soils—cryozems (Cryosols), gleyezems (Gleysols), and peat soils (Histosols)—have been studied by electron paramagnetic resonance spectroscopy. First information was acquired on the content of free radicals in humic acids from polar soils for the northern regions of Western Siberia (Gydan Peninsula, Belyi Island). It was found that polar soils are characterized by higher contents of free radicals than other zonal soils. This is related to the lower degree of humification of organic matter and the enhanced hydromorphism under continuous permafrost conditions. The low degree of organic matter humification in the cryolithozone was confirmed by the increased content of free radicals as determined by electron paramagnetic resonance, which indicates a low biothermodynamic stability of organic matter.

  18. Developments in absorptive glass mat separators for cycling applications and 36 V lead-acid batteries

    NASA Astrophysics Data System (ADS)

    Toniazzo, V.; Lambert, U.

    The major markets for valve-regulated lead-acid (VRLA) batteries are undergoing a radical upheaval. In particular, the telecommunications industry requires more reliable power supplies, and the familiar 12 V electrical system in cars will probably be soon replaced by a 36/42 V system, or by other electrical systems if part of the automotive market is taken over by hybrid electrical vehicles (HEVs). In order to meet these new challenges and enable VRLA batteries to provide a satisfactory life in float and cycling applications in the telecommunication field, or in the high-rate-partial-state-of-charge service required by both 36/42 V automobiles and HEVs, the lead-acid battery industry has to improve substantially the quality of present VRLA batteries based on absorptive glass mat (AGM) technology. Therefore, manufacturing steps and cell components have to be optimized, especially AGM separators as these are key components for better production yields and battery performance. This paper shows how the optimal segregation of the coarse and fine fibres in an AGM separator structure can improve greatly the properties of the material. The superior capillarity, springiness and mechanical properties of the 100% glass Amerglass multilayer separator compared with commercial monolayer counterparts with the same specific surface-area is highlighted.

  19. Vertical distribution of bacterial community is associated with the degree of soil organic matter decomposition in the active layer of moist acidic tundra.

    PubMed

    Kim, Hye Min; Lee, Min Jin; Jung, Ji Young; Hwang, Chung Yeon; Kim, Mincheol; Ro, Hee-Myong; Chun, Jongsik; Lee, Yoo Kyung

    2016-11-01

    The increasing temperature in Arctic tundra deepens the active layer, which is the upper layer of permafrost soil that experiences repeated thawing and freezing. The increasing of soil temperature and the deepening of active layer seem to affect soil microbial communities. Therefore, information on soil microbial communities at various soil depths is essential to understand their potential responses to climate change in the active layer soil. We investigated the community structure of soil bacteria in the active layer from moist acidic tundra in Council, Alaska. We also interpreted their relationship with some relevant soil physicochemical characteristics along soil depth with a fine scale (5 cm depth interval). The bacterial community structure was found to change along soil depth. The relative abundances of Acidobacteria, Gammaproteobacteria, Planctomycetes, and candidate phylum WPS-2 rapidly decreased with soil depth, while those of Bacteroidetes, Chloroflexi, Gemmatimonadetes, and candidate AD3 rapidly increased. A structural shift was also found in the soil bacterial communities around 20 cm depth, where two organic (upper Oi and lower Oa) horizons are subdivided. The quality and the decomposition degree of organic matter might have influenced the bacterial community structure. Besides the organic matter quality, the vertical distribution of bacterial communities was also found to be related to soil pH and total phosphorus content. This study showed the vertical change of bacterial community in the active layer with a fine scale resolution and the possible influence of the quality of soil organic matter on shaping bacterial community structure.

  20. Geoarchaeota: a new candidate phylum in the Archaea from high-temperature acidic iron mats in Yellowstone National Park

    SciTech Connect

    Kozubal, Mark; Romine, Margaret F.; Jennings, Ryan; Jay, Z.; Tringe, Susannah G.; Rusch, Douglas B.; Beam, Jake; McCue, Lee Ann; Inskeep, William P.

    2013-03-01

    Geothermal systems in Yellowstone National Park (YNP) provide an outstanding opportunity to understand the origin and evolution of metabolic processes necessary for life in extreme environments including low pH, high temperature, low oxygen and elevated concentrations of reduced iron. Previous phylogenetic studies of acidic ferric iron mats from YNP have revealed considerable diversity of uncultivated and undescribed archaea. The goal of this study was to obtain replicate de novo genome assemblies for a dominant archaeal population inhabiting acidic iron oxide mats in YNP. Detailed analysis of conserved ribosomal and informational processing genes indicate that the replicate assemblies represent a new phylum-level lineage referred to here as 'novel archaeal group 1 (NAG1)'. The NAG1 organisms contain pathways necessary for the catabolism of peptides and complex carbohydrates as well as a bacterial-like Form I CO dehydrogenase complex likely used for energy conservation. Moreover, this novel population contains genes involved in metabolism of oxygen including a Type A heme copper oxidase, a bd-type terminal oxidase and a putative oxygen sensing protoglobin. NAG1 has a variety of unique bacterial-like cofactor biosynthesis and transport genes and a Type3-like CRISPR system. Discovery of NAG1 is critical to our understanding of microbial community structure and function in extant thermophilic iron mats of YNP, and will provide insight regarding the evolution of Archaea in early Earth environments that may have important analogues active in YNP today.

  1. Geoarchaeota: a new candidate phylum in the Archaea from high-temperature acidic iron mats in Yellowstone National Park.

    PubMed

    Kozubal, Mark A; Romine, Margaret; Jennings, Ryan deM; Jay, Zack J; Tringe, Susannah G; Rusch, Doug B; Beam, Jacob P; McCue, Lee Ann; Inskeep, William P

    2013-03-01

    Geothermal systems in Yellowstone National Park (YNP) provide an outstanding opportunity to understand the origin and evolution of metabolic processes necessary for life in extreme environments including low pH, high temperature, low oxygen and elevated concentrations of reduced iron. Previous phylogenetic studies of acidic ferric iron mats from YNP have revealed considerable diversity of uncultivated and undescribed archaea. The goal of this study was to obtain replicate de novo genome assemblies for a dominant archaeal population inhabiting acidic iron-oxide mats in YNP. Detailed analysis of conserved ribosomal and informational processing genes indicates that the replicate assemblies represent a new candidate phylum within the domain Archaea referred to here as 'Geoarchaeota' or 'novel archaeal group 1 (NAG1)'. The NAG1 organisms contain pathways necessary for the catabolism of peptides and complex carbohydrates as well as a bacterial-like Form I carbon monoxide dehydrogenase complex likely used for energy conservation. Moreover, this novel population contains genes involved in the metabolism of oxygen including a Type A heme copper oxidase, a bd-type terminal oxidase and a putative oxygen-sensing protoglobin. NAG1 has a variety of unique bacterial-like cofactor biosynthesis and transport genes and a Type3-like CRISPR system. Discovery of NAG1 is critical to our understanding of microbial community structure and function in extant thermophilic iron-oxide mats of YNP, and will provide insight regarding the evolution of Archaea in early Earth environments that may have important analogs active in YNP today.

  2. Electrospun ultra-fine cellulose acetate fibrous mats containing tannic acid-Fe(3+) complexes.

    PubMed

    Yang, Weiqiao; Sousa, Ana M M; Fan, Xuetong; Jin, Tony; Li, Xihong; Tomasula, Peggy M; Liu, LinShu

    2017-02-10

    Cellulose acetate (CA) fibrous mats with improved mechanical and antioxidant properties were produced by a simple, scalable and cost-effective electrospinning method. Fibers loaded with small amounts of TA-Fe(3+) complexes showed an increase in tensile strength of ∼117% when compared to that of neat CA and were more resistant than those loaded with TA alone. The water uptake of the fibers increased upon TA or TA-Fe(3+) incorporation while their thermal behavior was only slightly affected. Fibrous mats loaded with TA-Fe(3+) showed comparable antioxidant activity with that of CA/TA mats, and a much slower TA release. These results suggest that TA-Fe(3+) complexes can be incorporated into electrospun CA fibers to improve their mechanical properties and antioxidant activity which may be of interest for the development of active packaging that can extend the shelf life of perishable foods.

  3. Influence of layer-by-layer assembled electrospun poly (L-lactic acid) nanofiber mats on the bioactivity of endothelial cells

    NASA Astrophysics Data System (ADS)

    Wu, Keke; Zhang, Xiazhi; Yang, Wufeng; Liu, Xiaoyan; Jiao, Yanpeng; Zhou, Changren

    2016-12-01

    Electrospun poly(L-lactic acid) (PLLA) nanofiber mats were successfully modified by deposition of multilayers with chitosan (CS), heparin (Hep) and graphene oxide (GO) through electrostatic layer-by-layer (LBL) self-assembly method. In this study, the surface properties of PLLA nanofiber mats before and after modification were investigated via scanning electron microscope (SEM), atomic force microscopy (AFM), attenuated total reflectance fourier transformation infrared spectroscopy (ATR-FTIR), X-ray photoelectron spectroscopy (XPS) and water contact angle measurement. In addition, the cytocompatibility of the modified PLLA nanofiber mats were investigated by testing endothelial cells compatibility, including cell attachment, cell proliferation and cell cycle. The results revealed that the surfaces of modified PLLA nanofiber mats become much rougher, stifiness and the hydrophilicity of the LBL modified PLLA nanofiber mats were improved compared to original PLLA one. Moreover, the modified PLLA nanofiber mats had promoted the endothelial cells viability attachment significantly. Besides, we studied the PLLA nanofiber mats on the expression of necrosis factor (TNF-α), interleukine-1β (IL-1β), monocyte chemoattractant protein-1 (MCP-1) and vascular cell adhesion molecule-1 (VCAM-1) in endothelial cells. The results showed that modified PLLA nanofiber mats had inhibited the inflammatory response to some extent.

  4. Belowground plant biomass allocation in tundra ecosystems and its relationship with temperature

    NASA Astrophysics Data System (ADS)

    Wang, Peng; Heijmans, Monique M. P. D.; Mommer, Liesje; van Ruijven, Jasper; Maximov, Trofim C.; Berendse, Frank

    2016-05-01

    Climate warming is known to increase the aboveground productivity of tundra ecosystems. Recently, belowground biomass is receiving more attention, but the effects of climate warming on belowground productivity remain unclear. Enhanced understanding of the belowground component of the tundra is important in the context of climate warming, since most carbon is sequestered belowground in these ecosystems. In this study we synthesized published tundra belowground biomass data from 36 field studies spanning a mean annual temperature (MAT) gradient from -20 °C to 0 °C across the tundra biome, and determined the relationships between different plant biomass pools and MAT. Our results show that the plant community biomass-temperature relationships are significantly different between above and belowground. Aboveground biomass clearly increased with MAT, whereas total belowground biomass and fine root biomass did not show a significant increase over the broad MAT gradient. Our results suggest that biomass allocation of tundra vegetation shifts towards aboveground in warmer conditions, which could impact on the carbon cycling in tundra ecosystems through altered litter input and distribution in the soil, as well as possible changes in root turnover.

  5. Soil bacterial community and functional shifts in response to altered snowpack in moist acidic tundra of northern Alaska

    NASA Astrophysics Data System (ADS)

    Ricketts, Michael P.; Poretsky, Rachel S.; Welker, Jeffrey M.; Gonzalez-Meler, Miquel A.

    2016-09-01

    Soil microbial communities play a central role in the cycling of carbon (C) in Arctic tundra ecosystems, which contain a large portion of the global C pool. Climate change predictions for Arctic regions include increased temperature and precipitation (i.e. more snow), resulting in increased winter soil insulation, increased soil temperature and moisture, and shifting plant community composition. We utilized an 18-year snow fence study site designed to examine the effects of increased winter precipitation on Arctic tundra soil bacterial communities within the context of expected ecosystem response to climate change. Soil was collected from three pre-established treatment zones representing varying degrees of snow accumulation, where deep snow ˜ 100 % and intermediate snow ˜ 50 % increased snowpack relative to the control, and low snow ˜ 25 % decreased snowpack relative to the control. Soil physical properties (temperature, moisture, active layer thaw depth) were measured, and samples were analysed for C concentration, nitrogen (N) concentration, and pH. Soil microbial community DNA was extracted and the 16S rRNA gene was sequenced to reveal phylogenetic community differences between samples and determine how soil bacterial communities might respond (structurally and functionally) to changes in winter precipitation and soil chemistry. We analysed relative abundance changes of the six most abundant phyla (ranging from 82 to 96 % of total detected phyla per sample) and found four (Acidobacteria, Actinobacteria, Verrucomicrobia, and Chloroflexi) responded to deepened snow. All six phyla correlated with at least one of the soil chemical properties (% C, % N, C : N, pH); however, a single predictor was not identified, suggesting that each bacterial phylum responds differently to soil characteristics. Overall, bacterial community structure (beta diversity) was found to be associated with snow accumulation treatment and all soil chemical properties

  6. Sulfonic Acid- and Lithium Sulfonate-Grafted Poly(Vinylidene Fluoride) Electrospun Mats As Ionic Liquid Host for Electrochromic Device and Lithium-Ion Battery.

    PubMed

    Zhou, Rui; Liu, Wanshuang; Leong, Yew Wei; Xu, Jianwei; Lu, Xuehong

    2015-08-05

    Electrospun polymer nanofibrous mats loaded with ionic liquids (ILs) are promising nonvolatile electrolytes with high ionic conductivity. The large cations of ILs are, however, difficult to diffuse into solid electrodes, making them unappealing for application in some electrochemical devices. To address this issue, a new strategy is used to introduce proton conduction into an IL-based electrolyte. Poly(vinylidene fluoride-co-hexafluoropropylene) (P(VDF-HFP)) copolymer is functionalized with sulfonic acid through covalent attachment of taurine. The sulfonic acid-grafted P(VDF-HFP) electrospun mats consist of interconnected nanofibers, leading to remarkable improvement in dimensional stability of the mats. IL-based polymer electrolytes are prepared by immersing the modified mats in 1-butyl-3-methylimidazolium tetrafluoroborate (BMIM(+)BF4(-)). It is found that the SO3(-) groups can have Lewis acid-base interactions with the cations (BMIM(+)) of IL to promote the dissociation of ILs, and provide additional proton conduction, resulting in significantly improved ionic conductivity. Using this novel electrolyte, polyaniline-based electrochromic devices show higher transmittance contrast and faster switching behavior. Furthermore, the sulfonic acid-grafted P(VDF-HFP) electrospun mats can also be lithiated, giving additional lithium ion conduction for the IL-based electrolyte, with which Li/LiCoO2 batteries display enhanced C-rate performance.

  7. Contrasting denitrifier communities relate to contrasting N2O emission patterns from acidic peat soils in arctic tundra.

    PubMed

    Palmer, Katharina; Biasi, Christina; Horn, Marcus A

    2012-05-01

    Cryoturbated peat circles (that is, bare surface soil mixed by frost action; pH 3-4) in the Russian discontinuous permafrost tundra are nitrate-rich 'hotspots' of nitrous oxide (N(2)O) emissions in arctic ecosystems, whereas adjacent unturbated peat areas are not. N(2)O was produced and subsequently consumed at pH 4 in unsupplemented anoxic microcosms with cryoturbated but not in those with unturbated peat soil. Nitrate, nitrite and acetylene stimulated net N(2)O production of both soils in anoxic microcosms, indicating denitrification as the source of N(2)O. Up to 500 and 10 μM nitrate stimulated denitrification in cryoturbated and unturbated peat soils, respectively. Apparent maximal reaction velocities of nitrite-dependent denitrification were 28 and 18 nmol N(2)O g(DW)(-1) h(-1), for cryoturbated and unturbated peat soils, respectively. Barcoded amplicon pyrosequencing of narG, nirK/nirS and nosZ (encoding nitrate, nitrite and N(2)O reductases, respectively) yielded ≈49 000 quality-filtered sequences with an average sequence length of 444 bp. Up to 19 species-level operational taxonomic units were detected per soil and gene, many of which were distantly related to cultured denitrifiers or environmental sequences. Denitrification-associated gene diversity in cryoturbated and in unturbated peat soils differed. Quantitative PCR (inhibition-corrected per DNA extract) revealed higher copy numbers of narG in cryoturbated than in unturbated peat soil. Copy numbers of nirS were up to 1000 × higher than those of nirK in both soils, and nirS nirK(-1) copy number ratios in cryoturbated and unturbated peat soils differed. The collective data indicate that the contrasting N(2)O emission patterns of cryoturbated and unturbated peat soils are associated with contrasting denitrifier communities.

  8. Contrasting denitrifier communities relate to contrasting N2O emission patterns from acidic peat soils in arctic tundra

    PubMed Central

    Palmer, Katharina; Biasi, Christina; Horn, Marcus A

    2012-01-01

    Cryoturbated peat circles (that is, bare surface soil mixed by frost action; pH 3–4) in the Russian discontinuous permafrost tundra are nitrate-rich ‘hotspots' of nitrous oxide (N2O) emissions in arctic ecosystems, whereas adjacent unturbated peat areas are not. N2O was produced and subsequently consumed at pH 4 in unsupplemented anoxic microcosms with cryoturbated but not in those with unturbated peat soil. Nitrate, nitrite and acetylene stimulated net N2O production of both soils in anoxic microcosms, indicating denitrification as the source of N2O. Up to 500 and 10 μ nitrate stimulated denitrification in cryoturbated and unturbated peat soils, respectively. Apparent maximal reaction velocities of nitrite-dependent denitrification were 28 and 18 nmol N2O gDW−1 h−1, for cryoturbated and unturbated peat soils, respectively. Barcoded amplicon pyrosequencing of narG, nirK/nirS and nosZ (encoding nitrate, nitrite and N2O reductases, respectively) yielded ≈49 000 quality-filtered sequences with an average sequence length of 444 bp. Up to 19 species-level operational taxonomic units were detected per soil and gene, many of which were distantly related to cultured denitrifiers or environmental sequences. Denitrification-associated gene diversity in cryoturbated and in unturbated peat soils differed. Quantitative PCR (inhibition-corrected per DNA extract) revealed higher copy numbers of narG in cryoturbated than in unturbated peat soil. Copy numbers of nirS were up to 1000 × higher than those of nirK in both soils, and nirS nirK−1 copy number ratios in cryoturbated and unturbated peat soils differed. The collective data indicate that the contrasting N2O emission patterns of cryoturbated and unturbated peat soils are associated with contrasting denitrifier communities. PMID:22134649

  9. Benthic plant communities in acidic Lake Colden, New York: Sphagnum and the algal mat

    SciTech Connect

    Hendrey, G R; Vertucci, J A

    1980-03-01

    Lake Colden, in the central Adirondack Mountains of New York State is botanically similar to acidified lakes in Sweden. Acidification of some Swedish lakes has been associated with an expansion of Sphagnum, primarily in shallow, sheltered littoral areas but also to depths of 18m. During a brief botanical survey on 24-25 July 1979, we observed a dense meadow of Sphagnum pylaesii around much of the shoreline of Lake Colden. Plant community composition was determined by a visual estimate of cover along a single typical transect and through underwater photography on 28-29 August 1979. Water samples were collected and returned to our laboratory for analyses several days later. Sample pH was determined by potentiometry and alkalinity by multiple end point titrations. Biomass samples were also taken of the Sphagnum mat community and dry weight was determined. Chemical content of plant tissue was analyzed.

  10. Improving cytoactive of endothelial cell by introducing fibronectin to the surface of poly L-Lactic acid fiber mats via dopamine.

    PubMed

    Yang, Wufeng; Zhang, Xiazhi; Wu, Keke; Liu, Xiaoyan; Jiao, Yanpeng; Zhou, Changren

    2016-12-01

    A simple but straightforward approach was reported to prepare fiber mats modified with fibronectin (Fn) protein for endothelial cells activity study. Based on the self-polymerization and strong adhesion feature of dopamine, poly L-Lactic acid (PLLA) fibers mat was modified via simply immersing them into dopamine solution for 16h. Subsequently, Fn was immobilized onto the fiber mats surface by the coupling reactive polydopamine (PDA) layer and Fn. Attenuated total reflectance Fourier transform infrared (ATR-FTIR) spectroscopy and X-ray photoelectron spectroscopy (XPS) were used to determine the chemical compositions of fiber mats surface, which confirmed the successful immobilization of PDA and Fn molecules on the fiber surface. Scanning electronic microscopy (SEM) was used to observe the surface morphology changes after modification with PDA and Fn. The data of water contact angle showed that the hydrophilicity of the fiber mats was improved after surface modification. The data of in vitro cell culture proved that the PDA and Fn modified surface significantly enhanced the adhesion, proliferation and cell activity of endothelial cells on the fiber mats. And the release of tumor necrosis factor-α (TNF-α) by endothelial cells on the modified surface was suppressed compared to that on culture plate and PLLA film at 2 and 4days, while the secretion of interleukin-1β (IL-1β) was increased compared to that on culture plate and PLLA film at 2days.

  11. Soil bacterial community shifts in response to vegetation and soil temperature change in moist acidic tundra of Northern Alaska

    NASA Astrophysics Data System (ADS)

    Ricketts, M. P.; Gonzalez-Meler, M. A.

    2013-12-01

    The effects of rising temperatures on Earth's ecosystems remain largely unknown and are an active area of research. In temperate systems, plant species often respond directly to climate forcing factors causing complex cascading effects in ecosystem C and nutrient cycling. Similarly, in the Arctic tundra, shifts in aboveground species composition and distribution have been observed in response to warming and other climate change factors, following increases in active layer depth and soil temperature. These abiotic changes provide soil microorganisms access to previously unavailable soil organic matter via thawing soils and increases soil microbial mineralization rates, suggesting that soil microorganisms may be eliciting the plant response. It is hypothesized that this release of nutrients may be providing a competitive advantage to N rich woody species, such as dwarf birch and diamond-leaf willow, over grassy species such as cottongrass tussock. Here we examine how microbial communities respond to increases in soil thermal insulation and vegetative change caused by the accumulation of winter precipitation at a snowfence installed in 1998 at Toolik Field Station, Alaska. In addition to soil temperature, increased snow depth also results in increased surface moisture, soil temperature, and active layer depth. Bacterial phylogenies and relative abundances from soils collected in August of 2012 were determined by sequencing 16S rRNA genes and analyzed using the QIIME software package. We found many significant relative abundance shifts between snow depth treatments (deep, intermediate, low) and soil depths (organic, transition, mineral), most notable of which include in an increase in Deltaproteobacteria in the deep treatment zones, a decrease in Alphaproteobacteria with increased soil depth, and a marked increase in Chloroflexi Anaerolineae (a green non-sulfur bacteria found in a wide range of habitats) in the deep treatment and mineral layers. Other interesting

  12. Revegetation of Alaskan Disturbed Sites by Native Tundra Species.

    DTIC Science & Technology

    1986-07-06

    In Press. Ecyomycorrihizal fungi of Salix rotundifolia Trautv. III. Resynthesized mycorrihizal-om-plexes and their surface phosphatase activity. Can. J...sedge seedlings. In addition, the organic mat may harbor mycorrhizal fungi that enhance seedling growth. (ii) Fertilizers should only be applied if...production in two tundra communities. Canadian Journal of Botany 52:103-116. Herbein, S.B. 1981. Soil phosphatases: Factors affecting enzyme activity in

  13. New York's TUNDRA.

    ERIC Educational Resources Information Center

    Kalinowski, Thomas

    1983-01-01

    Found at the summit of some of the highest peaks of New York State's Adirondack Mountains are low-growing plants similar, and in many cases, identical to plants growing in the Arctic. Describes these plants and the environment in which they are found. Includes a color plate of alpine tundra plants. (Author/JN)

  14. Water-soluble organic acids in cryomorphic peat soils of the southeastern Bol'shezemel'skaya tundra

    NASA Astrophysics Data System (ADS)

    Shamrikova, E. V.; Kaverin, D. A.; Pastukhov, A. V.; Lapteva, E. M.; Kubik, O. S.; Punegov, V. V.

    2015-03-01

    The composition of the water extracts, the pH, and the weight concentrations of the total organic carbon and low-molecular-weight organic acids in seasonally thawed and perennially frozen horizons of cryomorphic peat soils have been determined. The quantitative analysis of the acids converted to trimethylsilyl derivatives has been performed by gas chromatography and chromato-mass spectroscopy. Hydroxypropanoic, propanoic, and hydroxyethanoic acids are the prevailing acids (30-50, 10-20, and 10% of the total acids, respectively). Malic, glyceric, hexadionic, trihydroxybutanoic, ribonic, and other acids have also been detected. It has been shown that the differences in the genesis of the peat deposits significantly affect the composition and content of water-soluble organic compounds in soils on the soil-profile and landscape levels.

  15. Mercury methylation in Sphagnum moss mats and its association with sulfate-reducing bacteria in an acidic Adirondack forest lake wetland.

    PubMed

    Yu, Ri-Qing; Adatto, Isaac; Montesdeoca, Mario R; Driscoll, Charles T; Hines, Mark E; Barkay, Tamar

    2010-12-01

    Processes leading to the bioaccumulation of methylmercury (MeHg) in northern wetlands are largely unknown. We have studied various ecological niches within a remote, acidic forested lake ecosystem in the southwestern Adirondacks, NY, to discover that mats comprised of Sphagnum moss were a hot spot for mercury (Hg) and MeHg accumulation (190.5 and 18.6 ng g⁻¹ dw, respectively). Furthermore, significantly higher potential methylation rates were measured in Sphagnum mats as compared with other sites within Sunday Lake's ecosystem. Although MPN estimates showed a low biomass of sulfate-reducing bacteria (SRB), 2.8 × 10⁴ cells mL⁻¹ in mat samples, evidence consisting of (1) a twofold stimulation of potential methylation by the addition of sulfate, (2) a significant decrease in Hg methylation in the presence of the sulfate reduction inhibitor molybdate, and (3) presence of dsrAB-like genes in mat DNA extracts, suggested that SRB were involved in Hg methylation. Sequencing of dsrB genes indicated that novel SRB, incomplete oxidizers including Desulfobulbus spp. and Desulfovibrio spp., and syntrophs dominated the sulfate-reducing guild in the Sphagnum moss mat. Sphagnum, a bryophyte dominating boreal peatlands, and its associated microbial communities appear to play an important role in the production and accumulation of MeHg in high-latitude ecosystems.

  16. Turbulent transports over tundra

    NASA Technical Reports Server (NTRS)

    Fitzjarrald, David R.; Moore, Kathleen E.

    1992-01-01

    An extensive period of eddy correlation surface flux measurements was conducted at a site distant from the coast on the western Alaskan tundra. The surface exchange of heat and moisture over tundra during the summer was limited by a strong resistance to transfer from the upper soil layer through the ground cover, with canopy resistances to evaporation observed to be approximately 200 s/m. Though July 1988 was anomalously warm and dry in the region and August was close to normal temperature and rainfall, there was no appreciable difference in the canopy resistance between the periods. During the dry sunny period at the end of July, the observed evaporation rate was 2 mm/d. High canopy resistance led to an approximate equipartition of net radiation between latent and sensible heat, each accounting for 40 percent of the available energy, with heat balance apparently going into soil heat flux.

  17. Vitamin-loaded electrospun cellulose acetate nanofiber mats as transdermal and dermal therapeutic agents of vitamin A acid and vitamin E.

    PubMed

    Taepaiboon, Pattama; Rungsardthong, Uracha; Supaphol, Pitt

    2007-09-01

    The present contribution reports the use of mats of electrospun cellulose acetate (CA; acetyl content=39.8%; Mw=30,000 Da) nanofibers as carriers for delivery of the model vitamins, all-trans retinoic acid or vitamin A acid (Retin-A) and alpha-tocopherol or vitamin E (Vit-E). The amounts of Vit-E and Retin-A loaded in the base CA solution [17% w/v in 2:1 v/v acetone/N,N-dimethylacetamide (DMAc)] were 5 and 0.5 wt% (based on the weight of CA), respectively. Cross-sectionally round and smooth fibers were obtained. The average diameters of these fibers ranged between 247 and 265 nm. The total immersion of the vitamin-loaded as-spun CA fiber mats in the acetate buffer solutions containing either 0.5 vol % Tween 80 or 0.5 vol % Tween 80 and 10 vol % methanol was used to arrive at the cumulative release of the vitamins from the fiber mat samples. The same was also conducted on the vitamin-loaded solution-cast CA films for comparison. In most cases, the vitamin-loaded as-spun fiber mats exhibited a gradual and monotonous increase in the cumulative release of the vitamins over the test periods (i.e., 24 h for Vit-E-loaded samples and 6 h for Retin-A-loaded ones), while the corresponding as-cast films exhibited a burst release of the vitamins.

  18. Osteogenesis of human adipose-derived stem cells on poly(dopamine)-coated electrospun poly(lactic acid) fiber mats.

    PubMed

    Lin, Chi-Chang; Fu, Shu-Juan

    2016-01-01

    Electrospinning is a versatile technique to generate large quantities of micro- or nano-fibers from a wide variety of shapes and sizes of polymer. The aim of this study is to develop functionalized electrospun nano-fibers and use a mussel-inspired surface coating to regulate adhesion, proliferation and differentiation of human adipose-derived stem cells (hADSCs). We prepared poly(lactic acid) (PLA) fibers coated with polydopamine (PDA). The morphology, chemical composition, and surface properties of PDA/PLA were characterized by SEM and XPS. PDA/PLA modulated hADSCs' responses in several ways. Firstly, adhesion and proliferation of hADSCs cultured on PDA/PLA were significantly enhanced relative to those on PLA. Increased focal adhesion kinase (FAK) and collagen I levels and enhanced cell attachment and cell cycle progression were observed upon an increase in PDA content. In addition, the ALP activity and osteocalcin of hADSCs cultured on PDA/PLA were significantly higher than seen in those cultured on a pure PLA mat. Moreover, hADSCs cultured on PDA/PLA showed up-regulation of the ang-1 and vWF proteins associated with angiogenesis differentiation. Our results demonstrate that the bio-inspired coating synthetic degradable PLA polymer can be used as a simple technique to render the surfaces of synthetic biodegradable fibers, thus enabling them to direct the specific responses of hADSCs.

  19. Amplification of electrolyte uptake in the absorptive glass mat (AGM) separator for valve regulated lead acid (VRLA) batteries

    NASA Astrophysics Data System (ADS)

    Kumar, Vijay; Kameswara Rao, P. V.; Rawal, Amit

    2017-02-01

    Absorptive glass mat (AGM) separators are widely used for valve regulated lead acid (VRLA) batteries due to their remarkable fiber and structural characteristics. Discharge performance and recharge effectiveness of VRLA batteries essentially rely on the distribution and saturation levels of the electrolyte within the AGM separator. Herein, we report an analytical model for predicting the wicking characteristics of AGM battery separators under unconfined and confined states. The model of wicking behavior of AGM is based upon Fries and Dreyer's approach that included the effect of gravity component which was neglected in classic Lucas-Washburn's model. In addition, the predictive model of wicking accounted for realistic structural characteristics of AGM via orientation averaging approach. For wicking under confined state, the structural parameters have been updated under defined level of compressive stresses based upon the constitutive equation derived for a planar network of fibers in AGM under transverse loading conditions. A comparison has been made between the theoretical models and experimental results of wicking behavior under unconfined and confined states. Most importantly, the presented work has highlighted the questionable validity of classic Lucas-Washburn model for predicting the wicking characteristics of AGM separator over longer time duration.

  20. Stress-Survival Gene Identification From an Acid Mine Drainage Algal Mat Community

    NASA Astrophysics Data System (ADS)

    Urbina-Navarrete, J.; Fujishima, K.; Paulino-Lima, I. G.; Rothschild-Mancinelli, B.; Rothschild, L. J.

    2014-12-01

    Microbial communities from acid mine drainage environments are exposed to multiple stressors to include low pH, high dissolved metal loads, seasonal freezing, and desiccation. The microbial and algal communities that inhabit these niche environments have evolved strategies that allow for their ecological success. Metagenomic analyses are useful in identifying species diversity, however they do not elucidate the mechanisms that allow for the resilience of a community under these extreme conditions. Many known or predicted genes encode for protein products that are unknown, or similarly, many proteins cannot be traced to their gene of origin. This investigation seeks to identify genes that are active in an algal consortium during stress from living in an acid mine drainage environment. Our approach involves using the entire community transcriptome for a functional screen in an Escherichia coli host. This approach directly targets the genes involved in survival, without need for characterizing the members of the consortium.The consortium was harvested and stressed with conditions similar to the native environment it was collected from. Exposure to low pH (< 3.2), high metal load, desiccation, and deep freeze resulted in the expression of stress-induced genes that were transcribed into messenger RNA (mRNA). These mRNA transcripts were harvested to build complementary DNA (cDNA) libraries in E. coli. The transformed E. coli were exposed to the same stressors as the original algal consortium to select for surviving cells. Successful cells incorporated the transcripts that encode survival mechanisms, thus allowing for selection and identification of the gene(s) involved. Initial selection screens for freeze and desiccation tolerance have yielded E. coli that are 1 order of magnitude more resistant to freezing (0.01% survival of control with no transcript, 0.2% survival of E. coli with transcript) and 3 orders of magnitude more resistant to desiccation (0.005% survival of

  1. Biogeochemistry of Microbial Mats

    NASA Technical Reports Server (NTRS)

    DesMarais, David J.; DeVincenizi, D. (Technical Monitor)

    2002-01-01

    The hierarchical organization of microbial ecosystems determines the rates of processes that shape Earth's environment, define the stage upon which major evolutionary events occurred, and create biosignatures in sediments and atmospheres. In cyanobacterial mats, oxygenic photosynthesis provides energy, organic substrates and oxygen to the ecosystem. Incident light changes with depth in the mat, both in intensity and spectral composition, and counteracting gradients of oxygen and sulfide shape the chemical microenvironment. A combination of benefits and hazards of light, oxygen and sulfide promotes the allocation of the various essential mat processes between light and dark periods and to various depths in the mat. Microliters produce hydrogen, small organic acids, nitrogen and sulfur species. Such compounds fuel a flow of energy and electrons in these ecosystems and thus shape interactions between groups of microorganisms. Coordinated observations of population distribution, abundance, and activity for an entire community are making fundamental questions in ecology accessible. These questions address those factors that sustain the remarkable diversity of microorganisms that are now being revealed by molecular techniques. These questions also target the processes that shape the various kinds of biosignatures that we will seek, both in ancient rocks from Earth and Mars, and in atmospheres of distant planets beyond our Solar System.

  2. A Facile Approach for the Mass Production of Submicro/Micro Poly (Lactic Acid) Fibrous Mats and Their Cytotoxicity Test towards Neural Stem Cells

    PubMed Central

    2016-01-01

    Despite many of the studies being conducted, the electrospinning of poly (lactic acid) (PLA), dissolved in its common solvents, is difficult to be continuously processed for mass production. This is due to the polymer solution droplet drying. Besides, the poor stretching capability of the polymer solution limits the production of small diameter fibers. To address these issues, we have examined the two following objectives: first, using an appropriate solvent system for the mass production of fibrous mats with fine-tunable fiber diameters; second, nontoxicity of the mats towards Neural Stem Cell (NSC). To this aim, TFA (trifluoroacetic acid) was used as a cosolvent, in a mixture with DCM (dichloromethane), and the solution viscosity, surface tension, electrical conductivity, and the continuity of the electrospinning process were compared with the solutions prepared with common single solvents. The binary solvent facilitated PLA electrospinning, resulting in a long lasting, stable electrospinning condition, due to the low surface tension and high conductivity of the binary-solvent system. The fiber diameter was tailored from nano to micro by varying effective parameters and examined by scanning electron microscopy (SEM) and image-processing software. Laminin-coated electrospun mats supported NSC expansion and spreading, as examined using AlamarBlue assay and fluorescent microscopy, respectively. PMID:27699177

  3. Paenibacillus tundrae sp. nov. and Paenibacillus xylanexedens sp. nov., Psychrotolerant, Xylan-Degrading, Bacteria from Alaskan Tundra

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Psychrotolerant, xylan-degrading, strains of bacteria were isolated from soil beneath moist non-acidic and acidic tundra in northern Alaska. Phylogenetic analysis based on 16S rRNA gene sequences revealed that each strain belonged to the genus Paenibacillus. The highest levels of 16S rRNA gene sim...

  4. USE OF PHOSPHOLIPID FATTY ACID PROFILES TO STUDY THE MICROBIAL COMPOSITION OF CYANOBACTERIAL MATS IN CABO ROJO SOLAR SALTERNS

    EPA Science Inventory

    The Cabo Rojo Saltern located in the West side of Puerto Rico is a hypersaline ecosystem that consists of crystallizer ponds surrounded by series of cyanobacterial mats. Although this ecosystem harbors a variety of microorganisms not much is known about their identity and relati...

  5. Micro-structural design and function of an improved absorptive glass mat (AGM) separator for valve-regulated lead-acid batteries

    NASA Astrophysics Data System (ADS)

    Nakayama, Y.; Kishimoto, K.; Sugiyama, S.; Sakaguchi, S.

    Two important properties of absorptive glass mat (AGM) separators are examined in order to design optimum separators for advanced valve-regulated lead-acid (VRLA) batteries. Acid stratification in the separator depends on its micro-glass-fibre diameter, and it is found that the extent of stratification can be estimated based on hydrodynamics theory. Decreasing the plate-group pressure of the separator in the wetted state is also investigated, and it is considered that the phenomenon is caused by the balance between the fibre strength and the surface tension of acid solution. Given these results, the way to design AGM separators according to purpose has been identified. Accordingly, a new AGM separator has been developed and this functions both to suppress stratification and to maintain plate-group pressure.

  6. Enhanced proliferation and osteogenic differentiation of mesenchymal stem cells on graphene oxide-incorporated electrospun poly(lactic-co-glycolic acid) nanofibrous mats.

    PubMed

    Luo, Yu; Shen, He; Fang, Yongxiang; Cao, Yuhua; Huang, Jie; Zhang, Mengxin; Dai, Jianwu; Shi, Xiangyang; Zhang, Zhijun

    2015-03-25

    Currently, combining biomaterial scaffolds with living stem cells for tissue regeneration is a main approach for tissue engineering. Mesenchymal stem cells (MSCs) are promising candidates for musculoskeletal tissue repair through differentiating into specific tissues, such as bone, muscle, and cartilage. Thus, successfully directing the fate of MSCs through factors and inducers would improve regeneration efficiency. Here, we report the fabrication of graphene oxide (GO)-doped poly(lactic-co-glycolic acid) (PLGA) nanofiber scaffolds via electrospinning technique for the enhancement of osteogenic differentiation of MSCs. GO-PLGA nanofibrous mats with three-dimensional porous structure and smooth surface can be readily produced via an electrospinning technique. GO plays two roles in the nanofibrous mats: first, it enhances the hydrophilic performance, and protein- and inducer-adsorption ability of the nanofibers. Second, the incorporated GO accelerates the human MSCs (hMSCs) adhesion and proliferation versus pure PLGA nanofiber and induces the osteogenic differentiation. The incorporating GO scaffold materials may find applications in tissue engineering and other fields.

  7. Above- and belowground responses of Arctic tundra ecosystems to altered soil nutrients and mammalian herbivory.

    PubMed

    Gough, Laura; Moore, John C; Shaver, Gauis R; Simpson, Rodney T; Johnson, David R

    2012-07-01

    Theory and observation indicate that changes in the rate of primary production can alter the balance between the bottom-up influences of plants and resources and the top-down regulation of herbivores and predators on ecosystem structure and function. The exploitation ecosystem hypothesis (EEH) posited that as aboveground net primary productivity (ANPP) increases, the additional biomass should support higher trophic levels. We developed an extension of EEH to include the impacts of increases in ANPP on belowground consumers in a similar manner as aboveground, but indirectly through changes in the allocation of photosynthate to roots. We tested our predictions for plants aboveground and for phytophagous nematodes and their predators belowground in two common arctic tundra plant communities subjected to 11 years of increased soil nutrient availability and/or exclusion of mammalian herbivores. The less productive dry heath (DH) community met the predictions of EEH aboveground, with the greatest ANPP and plant biomass in the fertilized plots protected from herbivory. A palatable grass increased in fertilized plots while dwarf evergreen shrubs and lichens declined. Belowground, phytophagous nematodes also responded as predicted, achieving greater biomass in the higher ANPP plots, whereas predator biomass tended to be lower in those same plots (although not significantly). In the higher productivity moist acidic tussock (MAT) community, aboveground responses were quite different. Herbivores stimulated ANPP and biomass in both ambient and enriched soil nutrient plots; maximum ANPP occurred in fertilized plots exposed to herbivory. Fertilized plots became dominated by dwarf birch (a deciduous shrub) and cloudberry (a perennial forb); under ambient conditions these two species coexist with sedges, evergreen dwarf shrubs, and Sphagnum mosses. Phytophagous nematodes did not respond significantly to changes in ANPP, although predator biomass was greatest in control plots. The

  8. Changes in tundra vascular plant biomass over thirty years at Imnavait Creek, Alaska.

    NASA Astrophysics Data System (ADS)

    Bret-Harte, M. S.; Euskirchen, E. S.; Edgar, C.; Huebner, D. C.; Okano, K.; Tucker, C.; Genet, H.; Ray, P. M.; Shaver, G. R.

    2014-12-01

    Understanding the magnitude of, and controls over, CO2 and water fluxes in arctic ecosystems is essential for accurate assessment and prediction of their responses to climate change. In 2013, we harvested vegetation and soils in the most common plant community types located in the source areas for fluxes measured by eddy covariance towers located in three representative Alaska tundra ecosystems along a toposequence (a ridge site composed of heath tundra and moist non-acidic tundra, a mid-slope site composed of moist acidic tussock tundra, and a valley bottom fen site composed of wet sedge tundra and moist acidic tundra) at Imnavait Creek, Alaska. While the purpose of this harvest was to relate biomass and production to estimates of overall net ecosystem CO2 exchange (NEE), gross primary productivity (GPP) and ecosystem respiration (ER) obtained by micrometeorological methods, it also afforded an opportunity to compare with biomass harvests done in the 1980s in moist acidic tundra at Imnavait Creek; there have been no other harvests than ours at Imnavait since then. Our data showed that plant biomass and production were greatest in the tussock tundra at the mid-slope tower, and least in the wet sedge community at the fen tower, while plant diversity was greatest in the communities at the ridge site. Aboveground biomass of vascular plants in our 2013 harvest in moist acidic tundra was nearly three times higher than that measured approximately thirty years earlier in three harvests of nearby areas at Imnavait Creek, due to an increase in the biomass of shrubs and graminoids. Comparison with other biomass harvests from the vicinity of Toolik Field Station indicate that vascular plant biomass in moist acidic tundra has increased over this time period, with the greatest increase evident by the mid-1990s, and a more gradual increase through to the present time, despite no obvious increase in air temperature as seen in data from nearby climate stations. These data will be

  9. Mat2exo

    SciTech Connect

    2012-09-11

    MAT2EXO is a program which translates mesh data from Matlab mat-file format to Exodus II format. This tool is the inverse of the commonly used tool exo2mat which translates Exodus II data to the Matlab mat-file format. These tools provide a means for preprocessing an Exodus II model file or postprocessing an Exodus II results file using Matlab

  10. [The gene pool of native inhabitants of the Samburg tundra].

    PubMed

    Osipova, L P; Posukh, O L; Ivakin, E A; Kriukov, Iu A; Karafet, T M

    1996-06-01

    This study continues a series of investigations of the gene pool of native Siberian ethnic groups. In a population of Tundra Nentsi (Northern Samoyeds) and a group of Komi-Zyryans (Finno-Ugrian) (Samburg settlement, Tyumenskaya oblast, Yamalo-Nenetskii Autonomous okrug), gene markers of the following genetic systems were studied: blood groups (ABO, MNSs, Rhesus, Kell, Duffy, and P), erythrocyte acid phosphatase (AcP), phosphoglucomutase 1 (PGM 1), haptoglobin (Hp), and transferrin (Tf). The population of Samburg Tundra Nentsi was shown to have a close genetic relationship with the "core" of the Forest Nentsi population. In Northern Samoyeds, three carriers of the rare allele K (blood group Kell) were found for the first time. It is suggested that this allele was transferred into the population of Tundra Nentsi from Komi. Samburg Tundra Nentsi are found to have the maximum frequency of the allele PGM 1 (Posphoglucomutase 1) among aboriginal populations of northern Asia. Analysis of original data and the literature revealed a significant genetic distance between the Komi and Northern Samoyed populations. It was shown that Samburg Komi occupy an intermediate position between the clusters of Nenets populations and Finno-Ugrians (Komi) living in Komi Republic.

  11. Seasonal variation of ecosystem respiration delta 13C in response to experimental permafrost thaw and vegetation removal in moist acidic tundra

    NASA Astrophysics Data System (ADS)

    Mauritz, M.; Pegoraro, E.; Salmon, V. G.; Natali, S.; Schuur, E.

    2015-12-01

    Permafrost soils store twice as much carbon (C) as is contained in the atmosphere and about one-third of global soil C. Under a warmer future climate, permafrost is expected to thaw and decompose, releasing C to the atmosphere, further amplifying global warming. However, studies show that warmer arctic temperatures promote plant growth, in addition to stimulating losses from the soil C pool. Using delta 13C of ecosystem respiration (Reco) during the seasonal cycle of active layer thaw, we seek to understand the effect of permafrost thaw on the relative contributions from microbial decomposition of soil C and more recently fixed, plant-dominated C. We measured weekly CO2 flux rates and delta 13C of Reco from experimentally warmed plots with rapid permafrost thaw and control thaw. Vegetation removal plots, in un-warmed tundra, were monitored to isolate the seasonal contributions from soil alone. We expected delta 13C to be dominated by plant activity in vegetated plots, particularly in areas with greater permafrost thaw because they have highest plant biomass. In vegetation removal plots we expected to see greater contribution from deep soil as seasonal thaw progressed. From May to July delta 13C was extremely variable early in the growing season, but became more uniform as vegetation greened and thaw deepened. In vegetated plots CO2 fluxes doubled, but remained constant in vegetation removal plots. This indicates that, with thaw, microbes had access to a more spatially uniform C substrate, but this had little effect on the magnitude of CO2 flux. Overall delta 13C in rapidly thawed plots was least enriched (-29.4 ‰), control plots intermediate (-28.9 ‰), and vegetation removal plots were most enriched (-28.5 ‰). This suggests that in vegetation removal plots microbes used more decomposed soil C as substrate, and much of the increase in CO2 flux in vegetated plots was the result of C recently fixed and contributed by plants.

  12. Aboveground and belowground responses to nutrient additions and herbivore exclusion in Arctic tundra ecosystems in northern Alaska

    NASA Astrophysics Data System (ADS)

    Moore, J. C.; Gough, L.; Simpson, R.; Johnson, D. R.

    2011-12-01

    The Arctic has experienced significant increased regional warming over the past 30 years. Warming generally increases tundra soil nutrient availability by creating a more favorable environment for plant growth, decomposition and nutrient mineralization. Aboveground there has been a "greening" of the Arctic with increased net primary productivity (NPP), and an increase in woody vegetation. Concurrent with the changes aboveground has been an increase in root growth at lower depths and a loss of soil organic C (40 -100 g C m-2 yr-1). Given that arctic soils contain 14% of the global soil C pool, understanding the mechanisms behind shifts of this magnitude that are changing arctic soils from a net sink to a net source of atmospheric C is critical. We took an integrated multi-trophic level approach to examine how altering soil nutrients and mammalian herbivore activity affects vegetation, soil fauna, and microbial communities as well as soil physical characteristics in moist acidic (MAT) and dry heath (DH) tundra. Our work was conducted at the Arctic LTER site in northern Alaska. We sampled the nutrient (controls and annual N+P additions) and herbivore (controls and exclosures) manipulations established in 1996 after 10 years of treatment. Models that incorporated the biomass estimates from the field were used to characterize the trophic structure of the belowground food web and to estimate carbon flux among soil organisms and C-mineralization rates. Both MAT and DH exhibited significant increases in NPP and root growth and changes in vegetation structure with transitions from a mixed community to deciduous shrubs in MAT and from lichens to grasses and shrubs in DH, with nutrient additions and herbivore exclosures. Belowground responses to the treatments were dependent on ecosystem type, but exposed alterations in trophic structure that included changes in microbial biomass, the establishment of microbivorous enchytreaids, increases in root-feeding nematodes, and

  13. Controls over nutrient flow through plants and microbes in Arctic tundra. Final report

    SciTech Connect

    Schimel, J.

    1994-02-01

    Ecosystem productivity in the Arctic is strongly controlled by N availability to plants. Thus, disturbances to the Arctic system are likely to have their greatest impacts by altering the supply of nutrients to plants. Thus, to understand the dynamics of Arctic tundra, a complete understanding of the controls on N cycling in tundra soils is necessary. This project focused on understanding nutrient dynamics in arctic tussock tundra, specifically evaluating the role of microbial uptake and competition for nutrients as a control on plant N-uptake. The project consisted of several major components: Short- and long-term partitioning of NH{sub 4}{sup +} in tussock tundra (1990--1991); Measurement of NH{sub 4}{sup +} uptake rates by Eriophorum vaginatum and by soil microbes; Determination of microbial NH{sub 4}{sup +} and NO{sub 3}{minus} uptake kinetics; and Determination of the partitioning of NH{sub 4}{sup +} and amino acids between E. vaginatum and soil microbes.

  14. Deposition of ozone to tundra

    SciTech Connect

    Jacob, D.J.; Fan, S.M.; Wofsy, S.C.; Spiro, P.A.; Bakwin, P.S.; Ritter, J.A.; Browell, E.V.; Gregory, G.L.; Fitzjarrald, D.R.; Moore, K.E. NASA, Langley Research Center, Hampton, VA New York State Univ., Albany )

    1992-10-01

    Eddy correlation measurements of O3 deposition fluxes to tundra during the Arctic Boundary Layer Expedition (ABLE 3A) are reported. The mean O[sub 3] deposition velocity was 0.24 cm/s in the daytime and 0.12 cm/s at night. The day-to-day difference in deposition velocity was driven by both atmospheric stability and surface reactivity. The mean surface resistance to O[sub 3] deposition was 2.6 s/cm in the daytime and 3.4 s/cm at night. The relatively low surface resistance at night is attributed to light-insensitive uptake of O[sub 3] at dry upland tundra surfaces. The small day-tonight difference in surface resistance is attributed to additional stomatal uptake by wet meadow tundra plants in the daytime. The mean O[sub 3] deposition flux to the world north of 60 deg N in July-August is estimated at 8.2 x 10 exp 10 molecules/sq cm/s. Suppression of photochemical loss by small anthropogenic inputs of nitrogen oxides could have a major effect on O[sub 3] concentrations in the summertime Arctic troposphere. 34 refs.

  15. Deposition of ozone to tundra

    NASA Technical Reports Server (NTRS)

    Jacob, D. J.; Fan, S.-M.; Wofsy, S. C.; Spiro, P. A.; Bakwin, P. S.; Ritter, J. A.; Browell, E. V.; Gregory, G. L.; Fitzjarrald, D. R.; Moore, K. E.

    1992-01-01

    Eddy correlation measurements of O3 deposition fluxes to tundra during the Arctic Boundary Layer Expedition (ABLE 3A) are reported. The mean O3 deposition velocity was 0.24 cm/s in the daytime and 0.12 cm/s at night. The day-to-day difference in deposition velocity was driven by both atmospheric stability and surface reactivity. The mean surface resistance to O3 deposition was 2.6 s/cm in the daytime and 3.4 s/cm at night. The relatively low surface resistance at night is attributed to light-insensitive uptake of O3 at dry upland tundra surfaces. The small day-tonight difference in surface resistance is attributed to additional stomatal uptake by wet meadow tundra plants in the daytime. The mean O3 deposition flux to the world north of 60 deg N in July-August is estimated at 8.2 x 10 exp 10 molecules/sq cm/s. Suppression of photochemical loss by small anthropogenic inputs of nitrogen oxides could have a major effect on O3 concentrations in the summertime Arctic troposphere.

  16. Isoprene emissions from a tundra ecosystem

    NASA Astrophysics Data System (ADS)

    Potosnak, M. J.; Baker, B. M.; LeStourgeon, L.; Disher, S. M.; Griffin, K. L.; Bret-Harte, M. S.

    2012-10-01

    Whole-system fluxes of isoprene from a~moist acidic tundra ecosystem and leaf-level emission rates of isoprene from a common species (Salix pulchra) in that same ecosystem were measured during three separate field campaigns. The field campaigns were conducted during the summers of 2005, 2010 and 2011 and took place at the Toolik Field Station (68.6° N, 149.6° W) on the north slope of the Brooks Range in Alaska, USA. The maximum rate of whole-system isoprene flux measured was over 1.2 mg C m-2 h-1 with an air temperature of 22 ° C and a PAR level over 1500 μmol m-2 s-1. Leaf-level isoprene emission rates for S. pulchra averaged 12.4 nmol m-2 s-1 (27.4 μg C gdw-1 h-1) extrapolated to standard conditions (PAR = 1000 μmol m-2 s-1 and leaf temperature = 30° C). Leaf-level isoprene emission rates were well characterized by the Guenther algorithm for temperature, but less so for light. Chamber measurements from a nearby moist acidic tundra ecosystem with less S. pulchra emitted significant amounts of isoprene, but at lower rates (0.45 mg C m-2 h-1). Comparison of our results to predictions from a global model found broad agreement, but a detailed analysis revealed some significant discrepancies. An atmospheric chemistry box model predicts that the observed isoprene emissions have a significant impact on Arctic atmospheric chemistry, including the hydroxyl radical (OH). Our results support the prediction that isoprene emissions from Arctic ecosystems will increase with global climate change.

  17. Isoprene emissions from a tundra ecosystem

    NASA Astrophysics Data System (ADS)

    Potosnak, M. J.; Baker, B. M.; LeStourgeon, L.; Disher, S. M.; Griffin, K. L.; Bret-Harte, M. S.; Starr, G.

    2013-02-01

    Whole-system fluxes of isoprene from a moist acidic tundra ecosystem and leaf-level emission rates of isoprene from a common species (Salix pulchra) in that same ecosystem were measured during three separate field campaigns. The field campaigns were conducted during the summers of 2005, 2010 and 2011 and took place at the Toolik Field Station (68.6° N, 149.6° W) on the north slope of the Brooks Range in Alaska, USA. The maximum rate of whole-system isoprene flux measured was over 1.2 mg C m-2 h-1 with an air temperature of 22 °C and a PAR level over 1500 μmol m-2 s-1. Leaf-level isoprene emission rates for S. pulchra averaged 12.4 nmol m-2 s-1 (27.4 μg C gdw-1 h-1) extrapolated to standard conditions (PAR = 1000 μmol m-2 s-1 and leaf temperature = 30 °C). Leaf-level isoprene emission rates were well characterized by the Guenther algorithm for temperature with published coefficients, but less so for light. Chamber measurements from a nearby moist acidic tundra ecosystem with little S. pulchra emitted significant amounts of isoprene, but at lower rates (0.45 mg C m-2 h-1) suggesting other significant isoprene emitters. Comparison of our results to predictions from a global model found broad agreement, but a detailed analysis revealed some significant discrepancies. An atmospheric chemistry box model predicts that the observed isoprene emissions have a significant impact on Arctic atmospheric chemistry, including a reduction of hydroxyl radical (OH) concentrations. Our results support the prediction that isoprene emissions from Arctic ecosystems will increase with global climate change.

  18. Gelled electrolytes for use in absorptive glass mat valve-regulated lead-acid (AGM VRLA) batteries working under 100% depth of discharge conditions

    NASA Astrophysics Data System (ADS)

    Tantichanakul, Titiporn; Chailapakul, Orawon; Tantavichet, Nisit

    2011-10-01

    Gelled electrolytes prepared from fumed silica for use in absorptive glass mat valve-regulated lead-acid (AGM VRLA) batteries and the effect of veratraldehyde addition on the electrochemical behavior and performance of AGM VRLA batteries are investigated. Cyclic voltammetry is used to investigate differences in the electrochemical behaviors of nongelled and gelled electrolytes and between gelled electrolytes with and without veratraldehyde. Battery performance is tested under 100% depth of discharge (100% DoD) conditions at both low- (0.1 C) and high- (1 C) rate discharges. The addition of silica or veratraldehyde does not affect the main reaction of the lead-acid batteries but tends to suppress the hydrogen evolution reaction. AGM VRLA batteries with gelled electrolytes have a higher discharge capacity and longer cycle life than the conventional nongel AGM VRLA batteries. The addition of 0.005% (w/v) veratraldehyde further improves battery performance, but higher (0.01%, w/v) veratraldehyde concentrations reduce it and correlate with the enhanced growth of lead sulfate crystals. The AGM VRLA battery prepared from a gelled electrolyte containing 0.005% (w/v) veratraldehyde provides the best battery performance in every operating temperature studied (0-60 °C).

  19. Microbial iron oxidation in the Arctic tundra and its implications for biogeochemical cycling.

    PubMed

    Emerson, David; Scott, Jarrod J; Benes, Joshua; Bowden, William B

    2015-12-01

    The role that neutrophilic iron-oxidizing bacteria play in the Arctic tundra is unknown. This study surveyed chemosynthetic iron-oxidizing communities at the North Slope of Alaska near Toolik Field Station (TFS) at Toolik Lake (lat 68.63, long -149.60). Microbial iron mats were common in submerged habitats with stationary or slowly flowing water, and their greatest areal extent is in coating plant stems and sediments in wet sedge meadows. Some Fe-oxidizing bacteria (FeOB) produce easily recognized sheath or stalk morphotypes that were present and dominant in all the mats we observed. The cool water temperatures (9 to 11°C) and reduced pH (5.0 to 6.6) at all sites kinetically favor microbial iron oxidation. A microbial survey of five sites based on 16S rRNA genes found a predominance of Proteobacteria, with Betaproteobacteria and members of the family Comamonadaceae being the most prevalent operational taxonomic units (OTUs). In relative abundance, clades of lithotrophic FeOB composed 5 to 10% of the communities. OTUs related to cyanobacteria and chloroplasts accounted for 3 to 25% of the communities. Oxygen profiles showed evidence for oxygenic photosynthesis at the surface of some mats, indicating the coexistence of photosynthetic and FeOB populations. The relative abundance of OTUs belonging to putative Fe-reducing bacteria (FeRB) averaged around 11% in the sampled iron mats. Mats incubated anaerobically with 10 mM acetate rapidly initiated Fe reduction, indicating that active iron cycling is likely. The prevalence of iron mats on the tundra might impact the carbon cycle through lithoautotrophic chemosynthesis, anaerobic respiration of organic carbon coupled to iron reduction, and the suppression of methanogenesis, and it potentially influences phosphorus dynamics through the adsorption of phosphorus to iron oxides.

  20. Microbial Iron Oxidation in the Arctic Tundra and Its Implications for Biogeochemical Cycling

    PubMed Central

    Scott, Jarrod J.; Benes, Joshua; Bowden, William B.

    2015-01-01

    The role that neutrophilic iron-oxidizing bacteria play in the Arctic tundra is unknown. This study surveyed chemosynthetic iron-oxidizing communities at the North Slope of Alaska near Toolik Field Station (TFS) at Toolik Lake (lat 68.63, long −149.60). Microbial iron mats were common in submerged habitats with stationary or slowly flowing water, and their greatest areal extent is in coating plant stems and sediments in wet sedge meadows. Some Fe-oxidizing bacteria (FeOB) produce easily recognized sheath or stalk morphotypes that were present and dominant in all the mats we observed. The cool water temperatures (9 to 11°C) and reduced pH (5.0 to 6.6) at all sites kinetically favor microbial iron oxidation. A microbial survey of five sites based on 16S rRNA genes found a predominance of Proteobacteria, with Betaproteobacteria and members of the family Comamonadaceae being the most prevalent operational taxonomic units (OTUs). In relative abundance, clades of lithotrophic FeOB composed 5 to 10% of the communities. OTUs related to cyanobacteria and chloroplasts accounted for 3 to 25% of the communities. Oxygen profiles showed evidence for oxygenic photosynthesis at the surface of some mats, indicating the coexistence of photosynthetic and FeOB populations. The relative abundance of OTUs belonging to putative Fe-reducing bacteria (FeRB) averaged around 11% in the sampled iron mats. Mats incubated anaerobically with 10 mM acetate rapidly initiated Fe reduction, indicating that active iron cycling is likely. The prevalence of iron mats on the tundra might impact the carbon cycle through lithoautotrophic chemosynthesis, anaerobic respiration of organic carbon coupled to iron reduction, and the suppression of methanogenesis, and it potentially influences phosphorus dynamics through the adsorption of phosphorus to iron oxides. PMID:26386054

  1. Absorptive glass mat separator surface modification and its influence on the heat generation in valve-regulated lead-acid battery

    NASA Astrophysics Data System (ADS)

    Drenchev, Boris; Dimitrov, Mitko; Boev, Victor; Aleksandrova, Albena

    2015-04-01

    This paper presents the results from a comparative study between two types of valve-regulated lead-acid battery cells, with uncoated and polymer composite coated absorptive glass mat (AGM) separators. The volt-ampere characteristics of the studied cells, recorded at different ambient temperatures, show that the cells with polymer coated separators have significantly lower overcharge (recombinant) current than the cells with conventional untreated AGM separator. During overcharge, the higher recombinant current in the cells with plain separator leads to higher cell temperature than that of the cells with polymer coated AGM separator. The possibility to avoid thermal runaway (TR) is also illustrated during polarization of the cells at 2.65 V. After 320 h, a conventional cell has C/4 current (trend to TR), while the cells with composite coating sustain low (C/26) constant current for long period of time (at least 650 h). The cycle life test indicates stable operation of the cells with coated separator, while the conventional cell reaches high recombinant current and thus, it is susceptible to thermal runaway phenomena.

  2. Isolate-specific effects of ultraviolet radiation on photosynthesis, growth and mycosporine-like amino acids in the microbial mat-forming cyanobacterium Microcoleus chthonoplastes.

    PubMed

    Pattanaik, Bagmi; Roleda, Michael Y; Schumann, Rhena; Karsten, Ulf

    2008-03-01

    Microcoleus chthonoplastes constitutes one of the dominant microorganisms in intertidal microbial mat communities. In the laboratory, the effects of repeated daily exposure to ultraviolet radiation (16:8 light:dark cycle) was investigated in unicyanobacterial cultures isolated from three different localities (Baltic Sea = WW6; North Sea = STO and Brittany = BRE). Photosynthesis and growth were measured in time series (12-15 days) while UV-absorbing mycosporine-like amino acids (MAAs) and cellular integrity were determined after 12 and 3 days exposure to three radiation treatments [PAR (22 mumol photon m(-2) s(-1)) = P; PAR + UV-A (8 W m(-2)) = PA; PAR + UV-A + UV-B (0.4 W m(-2)) = PAB]. Isolate-specific responses to UVR were observed. The proximate response to radiation stress after 1-day treatment showed that isolate WW6 was the most sensitive to UVR. However, repeated exposure to radiation stress indicated that photosynthetic efficiency (F (v)/F (m)) of WW6 acclimated to UVR. Conversely, although photosynthesis in STO exhibited lower reduction in F (v)/F (m) during the first day, the values declined over time. The BRE isolate was the most tolerant to radiation stress with the lowest reduction in F (v)/F (m )sustained over time. While photosynthetic efficiencies of different isolates were able to acclimate to UVR, growth did not. The discrepancy seems to be due to the higher cell density used for photosynthesis compared to the growth measurement. Apparently, the cell density used for photosynthesis was not high enough to offer self-shading protection because cellular damage was also observed in those filaments under UVR. Most likely, the UVR acclimation of photosynthesis reflects predominantly the performance of the surviving cells within the filaments. Different strategies were observed in MAAs synthesis. Total MAAs content in WW6 was not significantly different between all the radiation treatments. In contrast, the additional fluence of UV-A and UV

  3. Micro-hybrid electric vehicle application of valve-regulated lead-acid batteries in absorbent glass mat technology: Testing a partial-state-of-charge operation strategy

    NASA Astrophysics Data System (ADS)

    Schaeck, S.; Stoermer, A. O.; Hockgeiger, E.

    The BMW Group has launched two micro-hybrid functions in high volume models in order to contribute to reduction of fuel consumption in modern passenger cars. Both the brake energy regeneration (BER) and the auto-start-stop function (ASSF) are based on the conventional 14 V vehicle electrical system and current series components with only little modifications. An intelligent control algorithm of the alternator enables recuperative charging in braking and coasting phases, known as BER. By switching off the internal combustion engine at a vehicle standstill the idling fuel consumption is effectively reduced by ASSF. By reason of economy and package a lead-acid battery is used as electrochemical energy storage device. The BMW Group assembles valve-regulated lead-acid (VRLA) batteries in absorbent glass mat (AGM) technology in the micro-hybrid electrical power system since special challenges arise for the batteries. By field data analysis a lower average state-of-charge (SOC) due to partial state-of-charge (PSOC) operation and a higher cycling rate due to BER and ASSF are confirmed in this article. Similar to a design of experiment (DOE) like method we present a long-term lab investigation. Two types of 90 Ah VRLA AGM batteries are operated with a test bench profile that simulates the micro-hybrid vehicle electrical system under varying conditions. The main attention of this lab testing is focused on capacity loss and charge acceptance over cycle life. These effects are put into context with periodically refresh charging the batteries in order to prevent accelerated battery aging due to hard sulfation. We demonstrate the positive effect of refresh chargings concerning preservation of battery charge acceptance. Furthermore, we observe moderate capacity loss over 90 full cycles both at 25 °C and at 3 °C battery temperature.

  4. Changes in tundra vascular plant biomass over thirty years at Imnavait Creek, Alaska, and current ecosystem C and N dynamics.

    NASA Astrophysics Data System (ADS)

    Bret-Harte, M. S.; Shaver, G. R.; Euskirchen, E. S.; Huebner, D. C.; Drew, J. W.; Cherry, J. E.; Edgar, C.

    2015-12-01

    Understanding the magnitude of, and controls over, carbon fluxes in arctic ecosystems is essential for accurate assessment and prediction of their responses to climate change. In 2013, we harvested vegetation and soils in the most common plant community types in source areas for fluxes measured by eddy covariance towers located in three representative Alaska tundra ecosystems along a toposequence (a ridge site of heath tundra and moist non-acidic tundra, a mid-slope site of moist acidic tussock tundra, and a valley bottom site of wet sedge tundra and moist acidic tussock tundra) at Imnavait Creek, Alaska. This harvest sought to relate biomass, production, composition, and C and N stocks in soil and vegetation, to estimates of net ecosystem CO2 exchange obtained by micrometeorological methods. Soil C and N stocks in the seasonally unfrozen soil layer were greatest in the wet sedge community, and least in the heath community. In contrast, moist acidic tussock tundra at the valley bottom site had the highest C and N stocks in vascular plant biomass, while nearby wet sedge tundra had the lowest. Overall, soil C:N ratio was highest in moist acidic tussock tundra at the mid-slope site. Aboveground biomass of vascular plants in moist acidic tundra at the mid-slope site was nearly three times higher than that measured thirty years earlier in vegetation harvests of nearby areas at Imnavait Creek. Other harvests from sites near Toolik Field Station suggest that vascular plant biomass in moist acidic tundra has increased in multiple sites over this time period. Increased biomass in the mid-1990s corresponds with a switch from mostly negative to mostly positive spatially-averaged air temperature anomalies in the climate record. All our sites have been annual net sources of CO2 to the atmosphere over nine years of measurement, but in the last two years, the valley bottom site has been a particularly strong source, due to CO2 losses in fall and winter that correspond with a

  5. Methane Suppression: The Impacts of Fe(III) and Humic Acids on Net Methane Flux from Arctic Tundra Wetlands in Alaska and Finland (Invited)

    NASA Astrophysics Data System (ADS)

    Lipson, D.; Miller, K.; Lai, C.

    2013-12-01

    Arctic soils contain large reservoirs of carbon (C) that are vulnerable to loss from climatic warming. However the potential global impacts of this C depend on whether it is lost primarily in the form of methane (CH4) or carbon dioxide (CO2), two gases with very different greenhouse warming potentials. In anaerobic environments, the relative production of CH4 vs. CO2 may be controlled by the presence of alternative terminal electron acceptors, which allow more thermodynamically favorable anaerobic respiratory pathways to dominate over methanogenesis. This work investigated how the addition of terminal electron acceptors, ferric iron (Fe(III)) and humic acids, affected net CH4 fluxes from high-latitude wetland ecosystems. We conducted two manipulative field experiments in Barrow, Alaska (71° N) and Finnish Lapland (69° N). The ecosystem in Barrow was known from previous studies to be rich in Fe(III) and to harbor a microbial community that is dominated by Fe(III)- and humic acid-reducing microorganisms. The role of these alternative electron acceptors had not previously been studied at the Finnish site. CH4 and CO2 fluxes were measured using a portable trace gas analyzer from experimental plots, before and after amendments with Fe(III) (in the chelated form, ferric nitrilotriacetic acid), humic acids, or water as a control. Both in the ecosystem with permafrost and naturally high levels of soil Fe (Barrow, AK) and in the ecosystem with no permafrost and naturally low levels of soil Fe (Petsikko, Finland), the addition of the alternative electron acceptors Fe(III) and humic acids significantly reduced net CH4 flux. CO2 fluxes were not significantly altered by the treatments. The reduction in CH4 flux persisted for at least several weeks post-treatment. There was no significant difference between the reduction caused by humic acids versus that from Fe(III). These results show that the suppression of CH4 flux by Fe(III) and humic acids is a widespread phenomenon that

  6. Biogeochemical modeling of tundra recovery following thermal erosion of permafrost

    NASA Astrophysics Data System (ADS)

    Pearce, A. R.; Rastetter, E. B.; Bowden, W. B.

    2011-12-01

    We simulate the biogeochemical recovery of tundra from a thermal erosion disturbance using the Multiple Element Limitation model (MEL) and compare model results with soil organic matter and nutrient chemistry measurements collected across a chronosequence of thermal erosion features. Thermal erosion of permafrost initially depletes the tundra of much of its vegetation and shallow soil organic matter. However, several decades later, there is often little distinguishing these scars from the surrounding undisturbed tundra. As thermal erosion features become more abundant on the arctic landscape, we desire to understand how the pools of carbon and nutrients rebuild after these disturbances. MEL is a plot-scale, process-based model that optimizes the acquisition of eight resources (light, water, CO2, PO4, NH4, NO3, DON and N-fixation) by vegetation based on how much of each is required and the effort needed to acquire it. Model output includes pool sizes of carbon, nitrogen and phosphorus in vegetation, litter, young soil organic matter and old soil organic matter and the fluxes among these pools over time. This calibration of MEL, operating on a daily timestep, was created with published data collected at or near the Toolik Field Station (Toolik Lake, AK, USA) from moist acidic tussock tundra sites. We corroborate our calibration with data from plot manipulations (N and P fertilization, greenhouse, and shade house) performed as part of the NSF Arctic LTER project. The initial conditions for the recovery simulations reflect post-failure observations of some of the variation in soil organic matter, and soil and water nutrient chemistry. With sufficient nutrients from residual soil or supplied in soil water from upslope, the model indicates that vegetation can recover within several decades, but recovery of C and nutrients lost from soils may take hundreds of years.

  7. Hypersaline Microbial Mat Lipid Biomarkers

    NASA Technical Reports Server (NTRS)

    Jahnke, Linda L.; Embaye, Tsegereda; Turk, Kendra A.; Summons, Roger E.

    2002-01-01

    Lipid biomarkers and compound specific isotopic abundances are powerful tools for studies of contemporary microbial ecosystems. Knowledge of the relationship of biomarkers to microbial physiology and community structure creates important links for understanding the nature of early organisms and paleoenvironments. Our recent work has focused on the hypersaline microbial mats in evaporation ponds at Guerrero Negro, Baja California Sur, Mexico. Specific biomarkers for diatoms, cyanobacteria, archaea, green nonsulfur (GNS), sulfate reducing, sulfur oxidizing and methanotrophic bacteria have been identified. Analyses of the ester-bound fatty acids indicate a highly diverse microbial community, dominated by photosynthetic organisms at the surface. The delta C-13 of cyanobacterial biomarkers such as the monomethylalkanes and hopanoids are consistent with the delta C-13 measured for bulk mat (-10%o), while a GNS biomarker, wax esters (WXE), suggests a more depleted delta C-13 for GNS biomass (-16%o). This isotopic relationship is different than that observed in mats at Octopus Spring, Yellowstone National Park (YSNP) where GNS appear to grow photoheterotrophic ally. WXE abundance, while relatively low, is most pronounced in an anaerobic zone just below the cyanobacterial layer. The WXE isotope composition at GN suggests that these bacteria utilize photoautotrophy incorporating dissolved inorganic carbon (DIC) via the 3-hydroxypropionate pathway using H2S or H2.

  8. ProMat

    SciTech Connect

    2008-06-12

    ProMAT is a software tool for statistically analyzing data from enzyme-linked immunosorbent assay microarray experiments. The software estimates standard curves, sample protein concentrations and their uncertainties for multiple assays. ProMAT generates a set of comprehensive figures for assessing results and diagnosing process quality. The tool is available for Windows or Mac, and is distributed as open-source Java and R code

  9. Consumption of atmospheric methane by tundra soils

    NASA Technical Reports Server (NTRS)

    Whalen, S. C.; Reeburgh, W. S.

    1990-01-01

    The results of field and laboratory experiments on methane consumption by tundra soils are reported. For methane concentrations ranging from below to well above ambient, moist soils are found to consume methane rapidly; in nonwaterlogged soils, equilibration with atmospheric methane is fast relative to microbial oxidation. It is concluded that lowering of the water table in tundra as a resulting from a warmer, drier climate will decrease methane fluxes and could cause these areas to provide negative feedback for atmospheric methane.

  10. Tundra Rehabilitation in Alaska's Arctic

    NASA Astrophysics Data System (ADS)

    Lynn, L. A.

    2012-12-01

    Oil exploration in Alaska's Arctic has been conducted for more than 40 years, resulting in over 3,640 ha of gravel fill placed for roads, pads, and airstrips to support the industry. Likewise, tundra disturbance from burying power lines and by tundra vehicle travel are also common. Rehabilitation of disturbed sites began around 2002, with well over 150 ha that has been previously treated or is currently being rehabilitated. Two primary goals of rehabilitation efforts have been 1) revegetation by indigenous species, and 2) limiting thermokarst. Early efforts were concerned that removing gravel and having exposed bare ground would lead to extensive subsidence and eolian erosion. Native grass cultivars (e.g. Poa glauca, Arctagrostis latifolia, and Festuca rubra) were seeded to create vegetation cover quickly with the expectation that these grasses would survive only temporarily. The root masses and leaf litter were also expected to trap indigenous seed to enhance natural recolonization by indigenous plants. Due to the remote location of these sites, many of which are only accessible by helicopter, most are visited only two to three times following cultivation treatments, providing a limited data pool. At many sites, the total live seeded grass cover declined about 15% over the first 5¬-6 years (from around 30% to 15% cover), while total live indigenous vascular cover increased from no or trace cover to an average of 10% cover in that time. Cover of indigenous vascular plants at sites that were not seeded with native grass cultivars averaged just less than 10% after 10 years, showing no appreciable difference between the two approaches. Final surface elevations at the sites affect local hydrology and soil moisture. Other factors that influence the success of vegetation cover are proximity to the Arctic coast (salt effects), depth of remaining gravel, and changes in characteristics of the near-surface soil. Further development of rehabilitation techniques and the

  11. MatMCNP

    SciTech Connect

    2015-10-19

    A code for generating MCNP material cards (MatMCNP) has been written and verified for naturally occurring, stable isotopes. The program allows for material specification as either atomic or weight percent (fractions). MatMCNP also permits the specification of enriched lithium, boron, and/or uranium. In addition to producing the material cards for MCNP, the code calculates the atomic (or number) density in atoms/barn-cm as well as the multiplier that should be used to convert neutron and gamma fluences into dose in the material specified.

  12. Mortality in tundra swans Cygnus columbianus

    USGS Publications Warehouse

    Bartonek, J.C.; Serie, J.R.; Converse, K.A.

    1991-01-01

    Our paper identifies and examines the significance of hunting and non-hunting mortality affecting the Eastern Population (EP) and Western Population (WP) (see Serie & Bartonek 1991a) of Tundra Swans. Sport hunting (Serie & Bartonek 1991b), native subsistence hunting (Copp 1989, Stewart & Bernier 1989), malicious shooting (McKelvey & MacNeill 1981), avian cholera (Friend et al. 1981, Schroeder 1983), ecto- and endoparasites (Trauger & Bartonek 1977, Woebeser 1981), lead poisoning (Sherwood 1960, Friend et al. 1981), collision (Willard 1978), and drowning (Miller et al. 1986) have been documented as being direct or indirect causes of mortality in fledged Tundra Swans; but their relative importance remains unknown.

  13. [Regional and extra-local pollen in tundra pollen samples].

    PubMed

    Vasil'chuk, A K

    2005-01-01

    Patterns of pollen spectra formation in the tundra zone of Eurasia were considered. Changes in total pollen concentration were traced in subfossil pollen samples of the tundra zone. The data on subfossil pollen spectra were used to evaluate the proportion between local and regional plus extra-local components of tundra pollen samples as well as the changes in concentration of pollen of Scots and Siberian stone pines as well as of tree and shrub birches. The diameter of dwarf birch pollen was determined in different tundra subzones of Western Siberia. The role of extra-local and regional pollen was considered for all vegetation subzones of tundra.

  14. Research on dynamics of tundra ecosystems and their potential response to energy research development. Progress report, 1 April 1982-March 1983

    SciTech Connect

    Oechel, W.C.

    1983-02-15

    Bryophyte species distributions were analyzed with respect to microtopography at an alpine tundra site in central Alaska which is dominated by tussocks of Eriophorum vaginatum. Bryophyte distributions were found to be significantly correlated with slope but not with azimuth. Different types of tussocks and hollows and mats between tussocks also supported different bryophyte floras. Water loss resistances of three species of moss did not account for differences in their distributions.

  15. Modeling the effects of organic nitrogen uptake by plants on the carbon cycling of boreal forest and tundra ecosystems

    NASA Astrophysics Data System (ADS)

    Zhu, Q.; Zhuang, Q.

    2013-12-01

    Boreal forest and tundra are the major ecosystems in the northern high latitudes in which a large amount of carbon is stored. These ecosystems are nitrogen-limited due to slow mineralization rate of the soil organic nitrogen. Recently, abundant field studies have found that organic nitrogen is another important nitrogen supply for boreal forest and tundra ecosystems. In this study, we incorporated a mechanism that allowed boreal plants to uptake small molecular amino acids into a process-based biogeochemical model, the Terrestrial Ecosystem Model (TEM), to evaluate the impact of organic nitrogen uptake on ecosystem carbon cycling. The new version of the model was evaluated for both boreal forest and tundra sites. We found that the modeled organic nitrogen uptake accounted for 36-87% of total nitrogen uptake by plants in tundra ecosystems and 26-50% for boreal forests, suggesting that tundra ecosystem might have more relied on the organic form of nitrogen than boreal forests. The simulated monthly gross ecosystem production (GPP) and net ecosystem production (NEP) tended to be larger with the new version of the model since the plant uptake of organic nitrogen alleviated the soil nitrogen limitation especially during the growing season. The sensitivity study indicated that the most important factors controlling the plant uptake of organic nitrogen was the soil amino acid diffusion coefficient (De) in our model, suggesting that the organic nitrogen uptake by plants is likely to be regulated by the edaphic characteristics of diffusion. The model uncertainty due to uncertain parameters associated with organic nitrogen uptake of the tundra ecosystem was larger than the boreal forest ecosystems. This study suggests that considering the organic nitrogen uptake by plants is important to carbon modeling of boreal forest and tundra ecosystems.

  16. Methane flux time series for tundra environments

    SciTech Connect

    Whalen, S.C.; Reeburgh, W.E. )

    1988-12-01

    Seasonal measurements of net methane flux were made at permanent sites representing important components of arctic tundra. The sites include Eriophorum tussocks, intertussock depressions, moss-covered areas, and Carex stands. Methane fluxes showed high diel, seasonal, intra site, and between site variability. Eriophorum tussocks and Carex dominated methane release to the atmosphere, with mean annual net methane fluxes of 8.05 + or{minus}2.50 g CH{sub 4}/sq m and 4.88 + or{minus}0.73 g CH{sub 4}/sq m, respectively. Methane fluxes form the moss sites and intertussock depressions were much lower. Over 90% of the mean annual methane flux from the Eriophorum, intertussock depressions, and Carex sites occurred between thaw and freeze-up. Some 40% of the mean annual methane flux from the moss sites occurred during winter. Composite methane fluxes for tussock tundra and Carex-dominated wet meadow tundra environments were produced by weighting measured component fluxes according to areal coverage. Tussock and wet meadow tundra account for an estimated global methane emission of 19-33 Tg/yr. 39 refs., 7 figs., 2 tabs.

  17. Stochastic daily modeling of arctic tundra ecosystems

    NASA Astrophysics Data System (ADS)

    Erler, A.; Epstein, H. E.; Frazier, J.

    2011-12-01

    ArcVeg is a dynamic vegetation model that has simulated interannual variability of production and abundance of arctic tundra plant types in previous studies. In order to address the effects of changing seasonality on tundra plant community composition and productivity, we have uniquely adapted the model to operate on the daily timescale. Each section of the model-weather generation, nitrogen mineralization, and plant growth dynamics-are driven by daily fluctuations in simulated temperature conditions. These simulation dynamics are achieved by calibrating stochastic iterative loops and mathematical functions with raw field data. Air temperature is the fundamental driver in the model, parameterized by climate data collected in the field across numerous arctic tundra sites, and key daily statistics are extracted (mean and standard deviation of temperature for each day of the year). Nitrogen mineralization is calculated as an exponential function from the simulated temperature. The seasonality of plant growth is driven by the availability of nitrogen and constrained by historical patterns and dynamics of the remotely sensed normalized difference vegetation index (NDVI), as they pertain to the seasonal onset of growth. Here we describe the methods used for daily weather generation, nitrogen mineralization, and the daily competition among twelve plant functional types for nitrogen and subsequent growth. This still rather simple approach to vegetation dynamics has the capacity to generate complex relationships between seasonal patterns of temperature and arctic tundra vegetation community structure and function.

  18. MAT2A mutations predispose individuals to thoracic aortic aneurysms.

    PubMed

    Guo, Dong-chuan; Gong, Limin; Regalado, Ellen S; Santos-Cortez, Regie L; Zhao, Ren; Cai, Bo; Veeraraghavan, Sudha; Prakash, Siddharth K; Johnson, Ralph J; Muilenburg, Ann; Willing, Marcia; Jondeau, Guillaume; Boileau, Catherine; Pannu, Hariyadarshi; Moran, Rocio; Debacker, Julie; Bamshad, Michael J; Shendure, Jay; Nickerson, Deborah A; Leal, Suzanne M; Raman, C S; Swindell, Eric C; Milewicz, Dianna M

    2015-01-08

    Up to 20% of individuals who have thoracic aortic aneurysms or acute aortic dissections but who do not have syndromic features have a family history of thoracic aortic disease. Significant genetic heterogeneity is established for this familial condition. Whole-genome linkage analysis and exome sequencing of distant relatives from a large family with autosomal-dominant inheritance of thoracic aortic aneurysms variably associated with the bicuspid aortic valve was used for identification of additional genes predisposing individuals to this condition. A rare variant, c.1031A>C (p.Glu344Ala), was identified in MAT2A, which encodes methionine adenosyltransferase II alpha (MAT IIα). This variant segregated with disease in the family, and Sanger sequencing of DNA from affected probands from unrelated families with thoracic aortic disease identified another MAT2A rare variant, c.1067G>A (p.Arg356His). Evidence that these variants predispose individuals to thoracic aortic aneurysms and dissections includes the following: there is a paucity of rare variants in MAT2A in the population; amino acids Glu344 and Arg356 are conserved from humans to zebrafish; and substitutions of these amino acids in MAT Iα are found in individuals with hypermethioninemia. Structural analysis suggested that p.Glu344Ala and p.Arg356His disrupt MAT IIα enzyme function. Knockdown of mat2aa in zebrafish via morpholino oligomers disrupted cardiovascular development. Co-transfected wild-type human MAT2A mRNA rescued defects of zebrafish cardiovascular development at significantly higher levels than mRNA edited to express either the Glu344 or Arg356 mutants, providing further evidence that the p.Glu344Ala and p.Arg356His substitutions impair MAT IIα function. The data presented here support the conclusion that rare genetic variants in MAT2A predispose individuals to thoracic aortic disease.

  19. MAT2A Mutations Predispose Individuals to Thoracic Aortic Aneurysms

    PubMed Central

    Guo, Dong-chuan; Gong, Limin; Regalado, Ellen S.; Santos-Cortez, Regie L.; Zhao, Ren; Cai, Bo; Veeraraghavan, Sudha; Prakash, Siddharth K.; Johnson, Ralph J.; Muilenburg, Ann; Willing, Marcia; Jondeau, Guillaume; Boileau, Catherine; Pannu, Hariyadarshi; Moran, Rocio; Debacker, Julie; Bamshad, Michael J.; Shendure, Jay; Nickerson, Deborah A.; Leal, Suzanne M.; Raman, C.S.; Swindell, Eric C.; Milewicz, Dianna M.

    2015-01-01

    Up to 20% of individuals who have thoracic aortic aneurysms or acute aortic dissections but who do not have syndromic features have a family history of thoracic aortic disease. Significant genetic heterogeneity is established for this familial condition. Whole-genome linkage analysis and exome sequencing of distant relatives from a large family with autosomal-dominant inheritance of thoracic aortic aneurysms variably associated with the bicuspid aortic valve was used for identification of additional genes predisposing individuals to this condition. A rare variant, c.1031A>C (p.Glu344Ala), was identified in MAT2A, which encodes methionine adenosyltransferase II alpha (MAT IIα). This variant segregated with disease in the family, and Sanger sequencing of DNA from affected probands from unrelated families with thoracic aortic disease identified another MAT2A rare variant, c.1067G>A (p.Arg356His). Evidence that these variants predispose individuals to thoracic aortic aneurysms and dissections includes the following: there is a paucity of rare variants in MAT2A in the population; amino acids Glu344 and Arg356 are conserved from humans to zebrafish; and substitutions of these amino acids in MAT Iα are found in individuals with hypermethioninemia. Structural analysis suggested that p.Glu344Ala and p.Arg356His disrupt MAT IIα enzyme function. Knockdown of mat2aa in zebrafish via morpholino oligomers disrupted cardiovascular development. Co-transfected wild-type human MAT2A mRNA rescued defects of zebrafish cardiovascular development at significantly higher levels than mRNA edited to express either the Glu344 or Arg356 mutants, providing further evidence that the p.Glu344Ala and p.Arg356His substitutions impair MAT IIα function. The data presented here support the conclusion that rare genetic variants in MAT2A predispose individuals to thoracic aortic disease. PMID:25557781

  20. Contexts for change in alpine tundra

    USGS Publications Warehouse

    Malanson, George P.; Rose, Jonathan P.; Schroeder, P. Jason; Fagre, Daniel B.

    2011-01-01

    Because alpine tundra is responding to climate change, a need exists to understand the meaning of observed changes. To provide context for such interpretation, the relevance of niche and neutral theories of biogeography and the continuum and classification approaches to biogeographic description are assessed. Two extensive studies of alpine tundra, from the Indian Peaks area, Colorado and Glacier National Park, Montana, are combined. The data are ordinated to describe relations. The pattern that emerges is one of a continuum of vegetation, but with the distinctions one might expect from distant sites. The relationships of the similarity of vegetation on all possible pairs of sites to the environmental differences and geographic distances are analyzed using Mantel correlations. Because distance and environmental differences in climate between the two sites are correlated, partial correlations are weak but still significant. More advanced analyses are suggested for this environment prior to interpretation of monitoring efforts such as GLORIA.

  1. Shrub biomass, net primary production, and canopy spectral imaging (NDVI) exhibit consistent correspondence across Arctic Tundra habitats.

    NASA Astrophysics Data System (ADS)

    Flower, C. E.; Welker, J. M.; Anderson-Smith, A.; Van Hoey, N.; Whelan, C.; Gonzalez-Meler, M. A.

    2014-12-01

    Climate change is contributing to rapid vegetation shifts in the ecologically sensitive arctic tundra. These tussock grass dominated systems are shifting to tussock/woody shrub communities with cascading ecological and climate feedback consequences. This shifting vegetation composition should result in concomitant changes in carbon sequestration (net ecosystem exchange, NEE) and productivity which in turn could be manifested in "Greening" and changes in normalized difference vegetation index values (NDVI). In this study, we address the need to know the relationships between NDVI, leaf area, and shrub biomass, in part so that long-term trends in NDVI can be much more accurately interpreted as true changes in ecosystem C cycling processes. These relationships will enhance our ability to predict shifts in standing carbon mass, carbon cycling, and use historic satellite products to assess change. We sampled NEE, NDVI, leaf area and shrub (Betula spp. and Salix spp.) biomass across a shrub gradient in a dry heath and moist acidic tundra. The positive relationship between NDVI and NEE highlights the potential shifts in tundra carbon sequestration associated with woody vegetation shifts. Furthermore, strong positive linear relationships found among shrub biomass, species, leaf area, and NDVI in different tundra habitats should increase the robustness of spatial scaling. Increased productivity in sites with increased NDVI can provide a mechanism through which tundra ecosystems may respond to climate change. Improvements in our ability to detect relationships between above and belowground biomass for the dominant shrubs can strengthen our ability to predict standing biomass from satellite imagery.

  2. The unseen iceberg: plant roots in arctic tundra.

    PubMed

    Iversen, Colleen M; Sloan, Victoria L; Sullivan, Patrick F; Euskirchen, Eugenie S; McGuire, A David; Norby, Richard J; Walker, Anthony P; Warren, Jeffrey M; Wullschleger, Stan D

    2015-01-01

    Plant roots play a critical role in ecosystem function in arctic tundra, but root dynamics in these ecosystems are poorly understood. To address this knowledge gap, we synthesized available literature on tundra roots, including their distribution, dynamics and contribution to ecosystem carbon and nutrient fluxes, and highlighted key aspects of their representation in terrestrial biosphere models. Across all tundra ecosystems, belowground plant biomass exceeded aboveground biomass, with the exception of polar desert tundra. Roots were shallowly distributed in the thin layer of soil that thaws annually, and were often found in surface organic soil horizons. Root traits - including distribution, chemistry, anatomy and resource partitioning - play an important role in controlling plant species competition, and therefore ecosystem carbon and nutrient fluxes, under changing climatic conditions, but have only been quantified for a small fraction of tundra plants. Further, the annual production and mortality of fine roots are key components of ecosystem processes in tundra, but extant data are sparse. Tundra root traits and dynamics should be the focus of future research efforts. Better representation of the dynamics and characteristics of tundra roots will improve the utility of models for the evaluation of the responses of tundra ecosystems to changing environmental conditions.

  3. Plant community responses to experimental warming across the tundra biome.

    PubMed

    Walker, Marilyn D; Wahren, C Henrik; Hollister, Robert D; Henry, Greg H R; Ahlquist, Lorraine E; Alatalo, Juha M; Bret-Harte, M Syndonia; Calef, Monika P; Callaghan, Terry V; Carroll, Amy B; Epstein, Howard E; Jónsdóttir, Ingibjörg S; Klein, Julia A; Magnússon, Borgthór; Molau, Ulf; Oberbauer, Steven F; Rewa, Steven P; Robinson, Clare H; Shaver, Gaius R; Suding, Katharine N; Thompson, Catharine C; Tolvanen, Anne; Totland, Ørjan; Turner, P Lee; Tweedie, Craig E; Webber, Patrick J; Wookey, Philip A

    2006-01-31

    Recent observations of changes in some tundra ecosystems appear to be responses to a warming climate. Several experimental studies have shown that tundra plants and ecosystems can respond strongly to environmental change, including warming; however, most studies were limited to a single location and were of short duration and based on a variety of experimental designs. In addition, comparisons among studies are difficult because a variety of techniques have been used to achieve experimental warming and different measurements have been used to assess responses. We used metaanalysis on plant community measurements from standardized warming experiments at 11 locations across the tundra biome involved in the International Tundra Experiment. The passive warming treatment increased plant-level air temperature by 1-3 degrees C, which is in the range of predicted and observed warming for tundra regions. Responses were rapid and detected in whole plant communities after only two growing seasons. Overall, warming increased height and cover of deciduous shrubs and graminoids, decreased cover of mosses and lichens, and decreased species diversity and evenness. These results predict that warming will cause a decline in biodiversity across a wide variety of tundra, at least in the short term. They also provide rigorous experimental evidence that recently observed increases in shrub cover in many tundra regions are in response to climate warming. These changes have important implications for processes and interactions within tundra ecosystems and between tundra and the atmosphere.

  4. Plant community responses to experimental warming across the tundra biome

    PubMed Central

    Walker, Marilyn D.; Wahren, C. Henrik; Hollister, Robert D.; Henry, Greg H. R.; Ahlquist, Lorraine E.; Alatalo, Juha M.; Bret-Harte, M. Syndonia; Calef, Monika P.; Callaghan, Terry V.; Carroll, Amy B.; Epstein, Howard E.; Jónsdóttir, Ingibjörg S.; Klein, Julia A.; Magnússon, Borgþór; Molau, Ulf; Oberbauer, Steven F.; Rewa, Steven P.; Robinson, Clare H.; Shaver, Gaius R.; Suding, Katharine N.; Thompson, Catharine C.; Tolvanen, Anne; Totland, Ørjan; Turner, P. Lee; Tweedie, Craig E.; Webber, Patrick J.; Wookey, Philip A.

    2006-01-01

    Recent observations of changes in some tundra ecosystems appear to be responses to a warming climate. Several experimental studies have shown that tundra plants and ecosystems can respond strongly to environmental change, including warming; however, most studies were limited to a single location and were of short duration and based on a variety of experimental designs. In addition, comparisons among studies are difficult because a variety of techniques have been used to achieve experimental warming and different measurements have been used to assess responses. We used metaanalysis on plant community measurements from standardized warming experiments at 11 locations across the tundra biome involved in the International Tundra Experiment. The passive warming treatment increased plant-level air temperature by 1-3°C, which is in the range of predicted and observed warming for tundra regions. Responses were rapid and detected in whole plant communities after only two growing seasons. Overall, warming increased height and cover of deciduous shrubs and graminoids, decreased cover of mosses and lichens, and decreased species diversity and evenness. These results predict that warming will cause a decline in biodiversity across a wide variety of tundra, at least in the short term. They also provide rigorous experimental evidence that recently observed increases in shrub cover in many tundra regions are in response to climate warming. These changes have important implications for processes and interactions within tundra ecosystems and between tundra and the atmosphere. PMID:16428292

  5. The unseen iceberg: Plant roots in arctic tundra

    USGS Publications Warehouse

    Iverson, Colleen M.; Sloan, Victoria L.; Sullivan, Patrick F.; Euskirchen, E.S.; McGuire, Anthony; Norby, Richard J.; Walker, Anthony P.; Warren, Jeffrey M.; Wullschleger, Stan D.

    2015-01-01

    Plant roots play a critical role in ecosystem function in arctic tundra, but root dynamics in these ecosystems are poorly understood. To address this knowledge gap, we synthesized available literature on tundra roots, including their distribution, dynamics and contribution to ecosystem carbon and nutrient fluxes, and highlighted key aspects of their representation in terrestrial biosphere models. Across all tundra ecosystems, belowground plant biomass exceeded aboveground biomass, with the exception of polar desert tundra. Roots were shallowly distributed in the thin layer of soil that thaws annually, and were often found in surface organic soil horizons. Root traits – including distribution, chemistry, anatomy and resource partitioning – play an important role in controlling plant species competition, and therefore ecosystem carbon and nutrient fluxes, under changing climatic conditions, but have only been quantified for a small fraction of tundra plants. Further, the annual production and mortality of fine roots are key components of ecosystem processes in tundra, but extant data are sparse. Tundra root traits and dynamics should be the focus of future research efforts. Better representation of the dynamics and characteristics of tundra roots will improve the utility of models for the evaluation of the responses of tundra ecosystems to changing environmental conditions.

  6. Geochemical drivers of organic matter decomposition in Arctic tundra soils

    SciTech Connect

    Herndon, Elizabeth M.; Yang, Ziming; Graham, David E.; Wullschleger, Stan D.; Gu, Baohua; Liang, Liyuan; Bargar, John; Janot, Noemie; Regier, Tom Z.

    2015-12-07

    Climate change is warming tundra ecosystems in the Arctic, resulting in the decomposition of previously-frozen soil organic matter (SOM) and release of carbon (C) to the atmosphere; however, the processes that control SOM decomposition and C emissions remain highly uncertain. In this study, we evaluate geochemical factors that influence anaerobic production of carbon dioxide (CO2) and methane (CH4) in the active layers of four ice-wedge polygons. Surface and soil pore waters were collected during the annual thaw season over a two-year period in an area containing waterlogged, low-centered polygons and well-drained, high-centered polygons. We report spatial and seasonal patterns of dissolved gases in relation to the geochemical properties of Fe and organic C as determined using spectroscopic and chromatographic techniques. Iron was present as Fe(II) in soil solution near the permafrost boundary but enriched as Fe(III) in the middle of the active layer, similar to dissolved aromatic-C and organic acids. Dissolved CH4 increased relative to dissolved CO2 with depth and varied with soil moisture in the middle of the active layer in patterns that were positively correlated with the proportion of dissolved Fe(III) in transitional and low-centered polygon soils but negatively correlated in the drier flat- and high-centered polygons. These results suggest that microbial-mediated Fe oxidation and reduction influence respiration/fermentation of SOM and production of substrates (e.g., low-molecular-weight organic acids) for methanogenesis. As a result, we infer that geochemical differences induced by water saturation dictate microbial products of SOM decomposition, and Fe geochemistry is an important factor regulating methanogenesis in anoxic tundra soils.

  7. Geochemical drivers of organic matter decomposition in Arctic tundra soils

    DOE PAGES

    Herndon, Elizabeth M.; Yang, Ziming; Graham, David E.; ...

    2015-12-07

    Climate change is warming tundra ecosystems in the Arctic, resulting in the decomposition of previously-frozen soil organic matter (SOM) and release of carbon (C) to the atmosphere; however, the processes that control SOM decomposition and C emissions remain highly uncertain. In this study, we evaluate geochemical factors that influence anaerobic production of carbon dioxide (CO2) and methane (CH4) in the active layers of four ice-wedge polygons. Surface and soil pore waters were collected during the annual thaw season over a two-year period in an area containing waterlogged, low-centered polygons and well-drained, high-centered polygons. We report spatial and seasonal patterns ofmore » dissolved gases in relation to the geochemical properties of Fe and organic C as determined using spectroscopic and chromatographic techniques. Iron was present as Fe(II) in soil solution near the permafrost boundary but enriched as Fe(III) in the middle of the active layer, similar to dissolved aromatic-C and organic acids. Dissolved CH4 increased relative to dissolved CO2 with depth and varied with soil moisture in the middle of the active layer in patterns that were positively correlated with the proportion of dissolved Fe(III) in transitional and low-centered polygon soils but negatively correlated in the drier flat- and high-centered polygons. These results suggest that microbial-mediated Fe oxidation and reduction influence respiration/fermentation of SOM and production of substrates (e.g., low-molecular-weight organic acids) for methanogenesis. As a result, we infer that geochemical differences induced by water saturation dictate microbial products of SOM decomposition, and Fe geochemistry is an important factor regulating methanogenesis in anoxic tundra soils.« less

  8. Pathways of anaerobic organic matter decomposition in tundra soils from Barrow, Alaska

    SciTech Connect

    Herndon, Elizabeth M.; Mann, Benjamin F.; Chowdhury, Taniya Roy; Wullschleger, Stan D.; Graham, David E.; Liang, Liyuan; Gu, Baohua; Yang, Ziming

    2015-11-23

    Arctic tundra soils store a large quantity of organic carbon that is susceptible to decomposition and release to the atmosphere as methane (CH4) and carbon dioxide (CO2) under a warming climate. Anaerobic processes that generate CH4 and CO2 remain unclear because previous studies have focused on aerobic decomposition pathways. To predict releases of CO2 and CH4 from tundra soils, it is necessary to identify pathways of soil organic matter decomposition under the anoxic conditions that are prevalent in Arctic ecosystems. Here molecular and spectroscopic techniques were used to monitor biological degradation of water-extractable organic carbon (WEOC) during anoxic incubation of tundra soils from a region of continuous permafrost in northern Alaska. Organic and mineral soils from the tundra active layer were incubated at –2, +4, or +8°C for up to 60 days to mimic the short-term thaw season. Results suggest that, under anoxic conditions, fermentation converted complex organic molecules into simple organic acids that were used in concomitant Fe-reduction and acetoclastic methanogenesis reactions. Nonaromatic compounds increased over time as WEOC increased. Organic acid metabolites initially accumulated in soils but were mostly depleted by day 60 because organic acids were consumed to produce Fe(II), CO2, and CH4. We conclude that fermentation of nonprotected organic matter facilitates methanogenesis and Fe reduction reactions, and that the proportion of organic acids consumed by methanogenesis increases relative to Fe reduction with increasing temperature. As a result, the decomposition pathways observed in this study are important to consider in numerical modeling of greenhouse gas production in the Arctic.

  9. Pathways of anaerobic organic matter decomposition in tundra soils from Barrow, Alaska

    DOE PAGES

    Herndon, Elizabeth M.; Mann, Benjamin F.; Chowdhury, Taniya Roy; ...

    2015-11-23

    Arctic tundra soils store a large quantity of organic carbon that is susceptible to decomposition and release to the atmosphere as methane (CH4) and carbon dioxide (CO2) under a warming climate. Anaerobic processes that generate CH4 and CO2 remain unclear because previous studies have focused on aerobic decomposition pathways. To predict releases of CO2 and CH4 from tundra soils, it is necessary to identify pathways of soil organic matter decomposition under the anoxic conditions that are prevalent in Arctic ecosystems. Here molecular and spectroscopic techniques were used to monitor biological degradation of water-extractable organic carbon (WEOC) during anoxic incubation ofmore » tundra soils from a region of continuous permafrost in northern Alaska. Organic and mineral soils from the tundra active layer were incubated at –2, +4, or +8°C for up to 60 days to mimic the short-term thaw season. Results suggest that, under anoxic conditions, fermentation converted complex organic molecules into simple organic acids that were used in concomitant Fe-reduction and acetoclastic methanogenesis reactions. Nonaromatic compounds increased over time as WEOC increased. Organic acid metabolites initially accumulated in soils but were mostly depleted by day 60 because organic acids were consumed to produce Fe(II), CO2, and CH4. We conclude that fermentation of nonprotected organic matter facilitates methanogenesis and Fe reduction reactions, and that the proportion of organic acids consumed by methanogenesis increases relative to Fe reduction with increasing temperature. As a result, the decomposition pathways observed in this study are important to consider in numerical modeling of greenhouse gas production in the Arctic.« less

  10. MILLIMETER-SCALE GENETIC GRADIENTS AND COMMUNITY-LEVEL MOLECULAR CONVERGENCE IN A HYPERSALINE MICROBIAL MAT

    SciTech Connect

    Fenner, Marsha W; Kunin, Victor; Raes, Jeroen; Harris, J. Kirk; Spear, John R.; Walker, Jeffrey J.; Ivanova, Natalia; Mering, Christian von; Bebout, Brad M.; Pace, Norman R.; Bork, Peer; Hugenholtz, Philip

    2008-04-30

    To investigate the extent of genetic stratification in structured microbial communities, we compared the metagenomes of 10 successive layers of a phylogenetically complex hypersaline mat from Guerrero Negro, Mexico. We found pronounced millimeter-scale genetic gradients that are consistent with the physicochemical profile of the mat. Despite these gradients, all layers displayed near identical and acid-shifted isoelectric point profiles due to a molecular convergence of amino acid usage indicating that hypersalinity enforces an overriding selective pressure on the mat community.

  11. Compositions of constructed microbial mats

    DOEpatents

    Bender, Judith A.; Phillips, Peter C.

    1999-01-01

    Compositions and methods of use of constructed microbial mats, comprising cyanobacteria and purple autotrophic bacteria and an organic nutrient source, in a laminated structure, are described. The constructed microbial mat is used for bioremediation of different individual contaminants and for mixed or multiple contaminants, and for production of beneficial compositions and molecules.

  12. Validation of FRP Matting Requirements

    DTIC Science & Technology

    2016-08-01

    Civil Engineer Center to validate requirements for using Fiber Reinforced Polymer (FRP) matting as a foreign object debris cover when repairing damaged...19 2.8.2 Type B-3 polymer glue anchor...FOD cover matting solution, Fiber Reinforced Polymer (FRP), was identified as a potential replacement as the USAF airfield damage repair (ADR

  13. Effect of electrospun non-woven mats of dibutyryl chitin/poly(lactic acid) blends on wound healing in hairless mice.

    PubMed

    Jang, Seon Il; Mok, Ji Ye; Jeon, In Hwa; Park, Kwang-Hyun; Nguyen, Thuy Thi Thu; Park, Jun Seo; Hwang, Hee Min; Song, Mi-Sun; Lee, Duckhee; Chai, Kyu Yun

    2012-03-09

    The aim of this study was to examine the proliferative ability of dibutyryl chitin (DBC) on scratch wounds in HaCaT keratinocytes and to evaluate the effect of nanoporous non-woven mat (DBCNFM) on skin wound healing in hairless mice using the advantages of DBCNFM, such as high porosity and high surface area to volume. The cell spreading activity of DBC was verified through a cell spreading assay in scratched human HaCaT keratinocytes. Scratch wound experiments showed that DBC notably accelerates the spreading rate of HaCaT keratinocytes in a dose dependent manner. The molecular aspects of the healing process were also investigated by hematoxylin & eosin staining of the healed skin, displaying the degrees of reepithelialization and immunostaining on extracellular matrix synthesis and remodeling of the skin. Topical application of DBCNFM significantly reduced skin wound rank scores and increased the skin remodeling of the wounded hairless mice in a dose dependent way. Furthermore, DBCNFM notably increased the expression of the type 1 collagen and filaggrin. These results demonstrate that DBC efficiently accelerates the proliferation of HaCaT keratinocytes and DBCNFM notably increases extracellular matrix synthesis on remodeling of the skin, and these materials are a good candidate for further evaluation as an effective wound healing agent.

  14. THE ROLE OF THERMAL REGIMEN IN TUNDRA PLANT COMMUNITY RESTORATION

    EPA Science Inventory

    Mineral extraction activities in the Arctic regions of the world produce long-lasting ecological disturbances. Assisted recovery from such disturbances may require restoration of the tundra thermal regime. We transplanted plugs of entire root zone and live tundra plants to a dist...

  15. Intense, natural pollution affects Arctic tundra vegetation at the Smoking Hills, Canada

    SciTech Connect

    Freedman, B. ); Zobens, V.; Hutchinson, T.C.; Gizyn, W.I. )

    1990-04-01

    Long-term, natural emissions of sulfur dioxide and acidic aerosols have had an impact on remote tundra at the Smoking Hills. The emissions have caused plant damage by SO{sub 2} toxicity, and have severely acidified soil and freshwater. At the most intensively fumigated locations closest to the sources of emission, pollution stresses have devegetated the terrestrial ecosystem. The first plants that are encountered along a spatial gradient of decreasing pollution stress are Artemisia tilesii and Arctagrostis latifolia, which dominate a characteristic, pollution-tolerant community. Farther away at moderately polluted sites there are mixed communities with floristic elements of both fumigated and reference, unfumigated tundra. This pattern of ecosystem response to a concatenation of stresses caused by natural air and soil pollution is qualitatively similar to the damage that occurs in the vicinity of anthropogenic point sources of air pollution, such as smelters.

  16. Soil bacterial community composition altered by increased nutrient availability in Arctic tundra soils.

    PubMed

    Koyama, Akihiro; Wallenstein, Matthew D; Simpson, Rodney T; Moore, John C

    2014-01-01

    The pool of soil organic carbon (SOC) in the Arctic is disproportionally large compared to those in other biomes. This large quantity of SOC accumulated over millennia due to slow rates of decomposition relative to net primary productivity. Decomposition is constrained by low temperatures and nutrient concentrations, which limit soil microbial activity. We investigated how nutrients limit bacterial and fungal biomass and community composition in organic and mineral soils within moist acidic tussock tundra ecosystems. We sampled two experimental arrays of moist acidic tussock tundra that included fertilized and non-fertilized control plots. One array included plots that had been fertilized annually since 1989 and the other since 2006. Fertilization significantly altered overall bacterial community composition and reduced evenness, to a greater degree in organic than mineral soils, and in the 1989 compared to the 2006 site. The relative abundance of copiotrophic α-Proteobacteria and β-Proteobacteria was higher in fertilized than control soils, and oligotrophic Acidobacteria were less abundant in fertilized than control soils at the 1989 site. Fungal community composition was less sensitive to increased nutrient availability, and fungal responses to fertilization were not consistent between soil horizons and sites. We detected two ectomycorrhizal genera, Russula and Cortinarius spp., associated with shrubs. Their relative abundance was not affected by fertilization despite increased dominance of their host plants in the fertilized plots. Our results indicate that fertilization, which has been commonly used to simulate warming in Arctic tundra, has limited applicability for investigating fungal dynamics under warming.

  17. Evidence and Implications of Frequent Fires in Ancient Shrub Tundra

    SciTech Connect

    Higuera, P E; Brubaker, L B; Anderson, P M; Brown, T A; Kennedy, A T; Hu, F S

    2008-03-06

    Understanding feedbacks between terrestrial and atmospheric systems is vital for predicting the consequences of global change, particularly in the rapidly changing Arctic. Fire is a key process in this context, but the consequences of altered fire regimes in tundra ecosystems are rarely considered, largely because tundra fires occur infrequently on the modern landscape. We present paleoecological data that indicate frequent tundra fires in northcentral Alaska between 14,000 and 10,000 years ago. Charcoal and pollen from lake sediments reveal that ancient birchdominated shrub tundra burned as often as modern boreal forests in the region, every 144 years on average (+/- 90 s.d.; n = 44). Although paleoclimate interpretations and data from modern tundra fires suggest that increased burning was aided by low effective moisture, vegetation cover clearly played a critical role in facilitating the paleo-fires by creating an abundance of fine fuels. These records suggest that greater fire activity will likely accompany temperature-related increases in shrub-dominated tundra predicted for the 21st century and beyond. Increased tundra burning will have broad impacts on physical and biological systems as well as land-atmosphere interactions in the Arctic, including the potential to release stored organic carbon to the atmosphere.

  18. Recent Arctic tundra fire initiates widespread thermokarst development

    DOE PAGES

    Jones, Benjamin M.; Grosse, Guido; Arp, Christopher D.; ...

    2015-10-29

    Fire-induced permafrost degradation is well documented in boreal forests, but the role of fires in initiating thermokarst development in Arctic tundra is less well understood. Here we show that Arctic tundra fires may induce widespread thaw subsidence of permafrost terrain in the first seven years following the disturbance. Quantitative analysis of airborne LiDAR data acquired two and seven years post-fire, detected permafrost thaw subsidence across 34% of the burned tundra area studied, compared to less than 1% in similar undisturbed, ice-rich tundra terrain units. The variability in thermokarst development appears to be influenced by the interaction of tundra fire burnmore » severity and near-surface, ground-ice content. Subsidence was greatest in severely burned, ice-rich upland terrain (yedoma), accounting for -50% of the detected subsidence, despite representing only 30% of the fire disturbed study area. Microtopography increased by 340% in this terrain unit as a result of ice wedge degradation. Increases in the frequency, magnitude, and severity of tundra fires will contribute to future thermokarst development and associated landscape change in Arctic tundra regions.« less

  19. Recent Arctic tundra fire initiates widespread thermokarst development

    SciTech Connect

    Jones, Benjamin M.; Grosse, Guido; Arp, Christopher D.; Miller, Eric; Liu, Lin; Hayes, Daniel J.; Larsen, Christopher F.

    2015-10-29

    Fire-induced permafrost degradation is well documented in boreal forests, but the role of fires in initiating thermokarst development in Arctic tundra is less well understood. Here we show that Arctic tundra fires may induce widespread thaw subsidence of permafrost terrain in the first seven years following the disturbance. Quantitative analysis of airborne LiDAR data acquired two and seven years post-fire, detected permafrost thaw subsidence across 34% of the burned tundra area studied, compared to less than 1% in similar undisturbed, ice-rich tundra terrain units. The variability in thermokarst development appears to be influenced by the interaction of tundra fire burn severity and near-surface, ground-ice content. Subsidence was greatest in severely burned, ice-rich upland terrain (yedoma), accounting for -50% of the detected subsidence, despite representing only 30% of the fire disturbed study area. Microtopography increased by 340% in this terrain unit as a result of ice wedge degradation. Increases in the frequency, magnitude, and severity of tundra fires will contribute to future thermokarst development and associated landscape change in Arctic tundra regions.

  20. Recent Arctic tundra fire initiates widespread thermokarst development

    NASA Astrophysics Data System (ADS)

    Jones, Benjamin M.; Grosse, Guido; Arp, Christopher D.; Miller, Eric; Liu, Lin; Hayes, Daniel J.; Larsen, Christopher F.

    2015-10-01

    Fire-induced permafrost degradation is well documented in boreal forests, but the role of fires in initiating thermokarst development in Arctic tundra is less well understood. Here we show that Arctic tundra fires may induce widespread thaw subsidence of permafrost terrain in the first seven years following the disturbance. Quantitative analysis of airborne LiDAR data acquired two and seven years post-fire, detected permafrost thaw subsidence across 34% of the burned tundra area studied, compared to less than 1% in similar undisturbed, ice-rich tundra terrain units. The variability in thermokarst development appears to be influenced by the interaction of tundra fire burn severity and near-surface, ground-ice content. Subsidence was greatest in severely burned, ice-rich upland terrain (yedoma), accounting for ~50% of the detected subsidence, despite representing only 30% of the fire disturbed study area. Microtopography increased by 340% in this terrain unit as a result of ice wedge degradation. Increases in the frequency, magnitude, and severity of tundra fires will contribute to future thermokarst development and associated landscape change in Arctic tundra regions.

  1. The unseen iceberg: plant roots in arctic tundra

    DOE PAGES

    Iversen, Colleen M.; Sloan, Victoria L.; Sullivan, Patrick F.; ...

    2014-09-10

    Arctic tundra is characterized by short-statured plant communities underlain by carbon (C)-rich soils and permafrost. Ecosystem C and nutrient cycles in tundra are driven by complex interactions between plants and their environment. However, root dynamics are one of the least understood aspects of plant growth in the Arctic. We synthesized available literature on tundra roots and discussed their representation in terrestrial biosphere models. Belowground biomass in tundra ecosystems can be an order of magnitude larger than aboveground biomass. Data on root production and turnover in tundra is sparse, limiting our understanding of the controls over root dynamics in these systems.more » Roots are shallowly distributed in the thin layer of soil that thaws each year, and are often found in the organic horizon at the soil surface. Species-specific differences in root distribution, mycorrhizal colonization, and resource partitioning may affect plant species competition under changing climatic conditions. Model representation of belowground processes has increased in complexity over recent years, but data are desperately needed to fill the gaps in model treatment of tundra roots. Future research should focus on estimates of root production and lifespan, and interactions between roots and the surrounding soil across the diversity of tundra ecosystems in the Arctic.« less

  2. Recent Arctic tundra fire initiates widespread thermokarst development.

    PubMed

    Jones, Benjamin M; Grosse, Guido; Arp, Christopher D; Miller, Eric; Liu, Lin; Hayes, Daniel J; Larsen, Christopher F

    2015-10-29

    Fire-induced permafrost degradation is well documented in boreal forests, but the role of fires in initiating thermokarst development in Arctic tundra is less well understood. Here we show that Arctic tundra fires may induce widespread thaw subsidence of permafrost terrain in the first seven years following the disturbance. Quantitative analysis of airborne LiDAR data acquired two and seven years post-fire, detected permafrost thaw subsidence across 34% of the burned tundra area studied, compared to less than 1% in similar undisturbed, ice-rich tundra terrain units. The variability in thermokarst development appears to be influenced by the interaction of tundra fire burn severity and near-surface, ground-ice content. Subsidence was greatest in severely burned, ice-rich upland terrain (yedoma), accounting for ~50% of the detected subsidence, despite representing only 30% of the fire disturbed study area. Microtopography increased by 340% in this terrain unit as a result of ice wedge degradation. Increases in the frequency, magnitude, and severity of tundra fires will contribute to future thermokarst development and associated landscape change in Arctic tundra regions.

  3. Recent Arctic tundra fire initiates widespread thermokarst development

    PubMed Central

    Jones, Benjamin M.; Grosse, Guido; Arp, Christopher D.; Miller, Eric; Liu, Lin; Hayes, Daniel J.; Larsen, Christopher F.

    2015-01-01

    Fire-induced permafrost degradation is well documented in boreal forests, but the role of fires in initiating thermokarst development in Arctic tundra is less well understood. Here we show that Arctic tundra fires may induce widespread thaw subsidence of permafrost terrain in the first seven years following the disturbance. Quantitative analysis of airborne LiDAR data acquired two and seven years post-fire, detected permafrost thaw subsidence across 34% of the burned tundra area studied, compared to less than 1% in similar undisturbed, ice-rich tundra terrain units. The variability in thermokarst development appears to be influenced by the interaction of tundra fire burn severity and near-surface, ground-ice content. Subsidence was greatest in severely burned, ice-rich upland terrain (yedoma), accounting for ~50% of the detected subsidence, despite representing only 30% of the fire disturbed study area. Microtopography increased by 340% in this terrain unit as a result of ice wedge degradation. Increases in the frequency, magnitude, and severity of tundra fires will contribute to future thermokarst development and associated landscape change in Arctic tundra regions. PMID:26511650

  4. The unseen iceberg: plant roots in arctic tundra

    SciTech Connect

    Iversen, Colleen M.; Sloan, Victoria L.; Sullivan, Patrick F.; Euskirchen, Eugenie S.; McGuire, A. David; Norby, Richard J.; Walker, Anthony P.; Warren, Jeffrey M.; Wullschleger, Stan D.

    2014-09-10

    Arctic tundra is characterized by short-statured plant communities underlain by carbon (C)-rich soils and permafrost. Ecosystem C and nutrient cycles in tundra are driven by complex interactions between plants and their environment. However, root dynamics are one of the least understood aspects of plant growth in the Arctic. We synthesized available literature on tundra roots and discussed their representation in terrestrial biosphere models. Belowground biomass in tundra ecosystems can be an order of magnitude larger than aboveground biomass. Data on root production and turnover in tundra is sparse, limiting our understanding of the controls over root dynamics in these systems. Roots are shallowly distributed in the thin layer of soil that thaws each year, and are often found in the organic horizon at the soil surface. Species-specific differences in root distribution, mycorrhizal colonization, and resource partitioning may affect plant species competition under changing climatic conditions. Model representation of belowground processes has increased in complexity over recent years, but data are desperately needed to fill the gaps in model treatment of tundra roots. Future research should focus on estimates of root production and lifespan, and interactions between roots and the surrounding soil across the diversity of tundra ecosystems in the Arctic.

  5. Recent Arctic tundra fire initiates widespread thermokarst development

    USGS Publications Warehouse

    Jones, Benjamin M.; Grosse, Guido; Arp, Christopher D.; Miller, Eric K.; Liu, Lingli; Hayes, Daniel J.; Larsen, Christopher F.

    2015-01-01

    Fire-induced permafrost degradation is well documented in boreal forests, but the role of fires in initiating thermokarst development in Arctic tundra is less well understood. Here we show that Arctic tundra fires may induce widespread thaw subsidence of permafrost terrain in the first seven years following the disturbance. Quantitative analysis of airborne LiDAR data acquired two and seven years post-fire, detected permafrost thaw subsidence across 34% of the burned tundra area studied, compared to less than 1% in similar undisturbed, ice-rich tundra terrain units. The variability in thermokarst development appears to be influenced by the interaction of tundra fire burn severity and near-surface, ground-ice content. Subsidence was greatest in severely burned, ice-rich upland terrain (yedoma), accounting for ~50% of the detected subsidence, despite representing only 30% of the fire disturbed study area. Microtopography increased by 340% in this terrain unit as a result of ice wedge degradation. Increases in the frequency, magnitude, and severity of tundra fires will contribute to future thermokarst development and associated landscape change in Arctic tundra regions.

  6. Willow Shrub Expansion Following Tundra Fires in Arctic Alaska

    NASA Astrophysics Data System (ADS)

    Racine, C.

    2010-12-01

    Climate warming in the Arctic is predicted to result in the expansion of woody shrubs and increased frequency and size of tundra fires. How will fire influence this shrub expansion? Over a period of 32 years, following a 1977 tundra fire in the central Seward Peninsula, we sampled seven times the post-fire vegetation at eight permanently marked sites on a long (2 Km) hillslope (Nimrod Hill). We had previously sampled vegetation here in 1973 prior to the fire. By 2001, 24 years post-fire conspicuous willow shrubs (mostly Salix pulchra) had increased in numbers, size and cover over the entire slope in moist tussock-shrub tundra, well-drained heath, and wet meadow. Prior to fire, willow on this slope was largely restricted to small drainages or watertracks. Willows here have originated from both seed and vegetative resprouting - the latter mostly in moist tussock-shrub tundra from willows resprouting within one to three years post-fire. With fire-induced removal of vascular plant competition and Spagnum moss cover and litter in tussock-shrub tundra, both seedling and resprouting willows have grown rapidly to overtop tussocks by 30-40 cm. Similar rapid post-fire resprouting of willows has been observed in tussock-shrub tundra after the 2007 Anaktuvuk River tundra fire and after the 1977 tundra fires in the Noatak River basin. On Nimrod Hill the most striking willow expansion has occurred on the severely burned and well-drained backslope where willow establishment from seed 5-10 years after fire has resulted in up to 40% cover of rapidly growing willows of both upright and spreading growth form. At several sites along the slope there is evidence of continuing willow expansion from seedlings 24 to 32 years post-fire, when we might expect the effects of fire on seedbeds would have ceased. We conclude that tundra fire may promote shrub expansion in the Arctic.

  7. A field operational test on valve-regulated lead-acid absorbent-glass-mat batteries in micro-hybrid electric vehicles. Part I. Results based on kernel density estimation

    NASA Astrophysics Data System (ADS)

    Schaeck, S.; Karspeck, T.; Ott, C.; Weckler, M.; Stoermer, A. O.

    2011-03-01

    In March 2007 the BMW Group has launched the micro-hybrid functions brake energy regeneration (BER) and automatic start and stop function (ASSF). Valve-regulated lead-acid (VRLA) batteries in absorbent glass mat (AGM) technology are applied in vehicles with micro-hybrid power system (MHPS). In both part I and part II of this publication vehicles with MHPS and AGM batteries are subject to a field operational test (FOT). Test vehicles with conventional power system (CPS) and flooded batteries were used as a reference. In the FOT sample batteries were mounted several times and electrically tested in the laboratory intermediately. Vehicle- and battery-related diagnosis data were read out for each test run and were matched with laboratory data in a data base. The FOT data were analyzed by the use of two-dimensional, nonparametric kernel estimation for clear data presentation. The data show that capacity loss in the MHPS is comparable to the CPS. However, the influence of mileage performance, which cannot be separated, suggests that battery stress is enhanced in the MHPS although a battery refresh function is applied. Anyway, the FOT demonstrates the unsuitability of flooded batteries for the MHPS because of high early capacity loss due to acid stratification and because of vanishing cranking performance due to increasing internal resistance. Furthermore, the lack of dynamic charge acceptance for high energy regeneration efficiency is illustrated. Under the presented FOT conditions charge acceptance of lead-acid (LA) batteries decreases to less than one third for about half of the sample batteries compared to new battery condition. In part II of this publication FOT data are presented by multiple regression analysis (Schaeck et al., submitted for publication [1]).

  8. Capillography of Mats of Nanofibers

    NASA Technical Reports Server (NTRS)

    Noca, Flavio; Sansom, Elijah; Zhou, Jijie; Gharib, Mory

    2008-01-01

    Capillography (from the Latin capillus, 'hair', and the Greek graphein, to write ) is a recently conceived technique for forming mats of nanofibers into useful patterns. The concept was inspired by experiments on carpetlike mats of multiwalled carbon nanotubes. Capillography may have the potential to be a less-expensive, less-time-consuming alternative to electron-beam lithography as a means of nanoscale patterning for the fabrication of small devices and instruments. In capillography, one exploits the lateral capillary forces exerted on small objects that pierce the surface of a liquid. If the small objects are identical, then the forces are always attractive. Two examples of the effects of such forces are the agglomeration of small particles floating on the surface of a pond and the drawing together of hairs of a wet paintbrush upon removal of the brush from water. Because nanoscale objects brought into contact remain stuck together indefinitely due to Van der Waals forces, patterns formed by capillography remain even upon removal of the liquid. For the experiments on the mats of carbon nanotubes, a surfactant solution capable of wetting carbon nanotubes (which are ultra-hydrophobic) was prepared. The mats were wetted with the solution, then dried. Once the mats were dry, it was found that the nanotubes had become ordered into various patterns, including nestlike indentations, trenches, and various combinations thereof. It may be possible to exploit such ordering effects through controlled wetting and drying of designated portions of mats of carbon nanotubes (and, perhaps, mats of nanofibers of other materials) to obtain patterns similar to those heretofore formed by use of electron-beam lithography. For making patterns that include nestlike indentations, it has been conjectured that it could be possible to control the nesting processes by use of electrostatic fields. Further research is needed to understand the physics of the patterning processes in order to

  9. U.S. Tundra Biome-International Biological Program. U.S. Tundra Biome Publication List.

    DTIC Science & Technology

    1983-09-01

    Provisional checklist to the vascular, bryophyte , and lichen flora of Prudhoe Bay, Alaska. In Ecological Investigations of the Tundra Biome in the Prudhoe Bay...4040) /Bib 33-4561/ Rastorfer, J.R., H.J. Webster and D.K. Smith (1973) Floristic and ecologic studies of bryophytes of selected habitats at...57: 1025-1033. (2759) /Bib 31-1286/ Steere, W.C. (1976) Ecology , phytogeography, and floristics of arctic Alaskan bryophytes . Journal of Hattori

  10. A field operational test on valve-regulated lead-acid absorbent-glass-mat batteries in micro-hybrid electric vehicles. Part II. Results based on multiple regression analysis and tear-down analysis

    NASA Astrophysics Data System (ADS)

    Schaeck, S.; Karspeck, T.; Ott, C.; Weirather-Koestner, D.; Stoermer, A. O.

    2011-03-01

    In the first part of this work [1] a field operational test (FOT) on micro-HEVs (hybrid electric vehicles) and conventional vehicles was introduced. Valve-regulated lead-acid (VRLA) batteries in absorbent glass mat (AGM) technology and flooded batteries were applied. The FOT data were analyzed by kernel density estimation. In this publication multiple regression analysis is applied to the same data. Square regression models without interdependencies are used. Hereby, capacity loss serves as dependent parameter and several battery-related and vehicle-related parameters as independent variables. Battery temperature is found to be the most critical parameter. It is proven that flooded batteries operated in the conventional power system (CPS) degrade faster than VRLA-AGM batteries in the micro-hybrid power system (MHPS). A smaller number of FOT batteries were applied in a vehicle-assigned test design where the test battery is repeatedly mounted in a unique test vehicle. Thus, vehicle category and specific driving profiles can be taken into account in multiple regression. Both parameters have only secondary influence on battery degradation, instead, extended vehicle rest time linked to low mileage performance is more serious. A tear-down analysis was accomplished for selected VRLA-AGM batteries operated in the MHPS. Clear indications are found that pSoC-operation with periodically fully charging the battery (refresh charging) does not result in sulphation of the negative electrode. Instead, the batteries show corrosion of the positive grids and weak adhesion of the positive active mass.

  11. Where do the treeless tundra areas of northern highlands fit in the global biome system: toward an ecologically natural subdivision of the tundra biome.

    PubMed

    Virtanen, Risto; Oksanen, Lauri; Oksanen, Tarja; Cohen, Juval; Forbes, Bruce C; Johansen, Bernt; Käyhkö, Jukka; Olofsson, Johan; Pulliainen, Jouni; Tømmervik, Hans

    2016-01-01

    According to some treatises, arctic and alpine sub-biomes are ecologically similar, whereas others find them highly dissimilar. Most peculiarly, large areas of northern tundra highlands fall outside of the two recent subdivisions of the tundra biome. We seek an ecologically natural resolution to this long-standing and far-reaching problem. We studied broad-scale patterns in climate and vegetation along the gradient from Siberian tundra via northernmost Fennoscandia to the alpine habitats of European middle-latitude mountains, as well as explored those patterns within Fennoscandian tundra based on climate-vegetation patterns obtained from a fine-scale vegetation map. Our analyses reveal that ecologically meaningful January-February snow and thermal conditions differ between different types of tundra. High precipitation and mild winter temperatures prevail on middle-latitude mountains, low precipitation and usually cold winters prevail on high-latitude tundra, and Scandinavian mountains show intermediate conditions. Similarly, heath-like plant communities differ clearly between middle latitude mountains (alpine) and high-latitude tundra vegetation, including its altitudinal extension on Scandinavian mountains. Conversely, high abundance of snowbeds and large differences in the composition of dwarf shrub heaths distinguish the Scandinavian mountain tundra from its counterparts in Russia and the north Fennoscandian inland. The European tundra areas fall into three ecologically rather homogeneous categories: the arctic tundra, the oroarctic tundra of northern heights and mountains, and the genuinely alpine tundra of middle-latitude mountains. Attempts to divide the tundra into two sub-biomes have resulted in major discrepancies and confusions, as the oroarctic areas are included in the arctic tundra in some biogeographic maps and in the alpine tundra in others. Our analyses based on climate and vegetation criteria thus seem to resolve the long-standing biome

  12. 8. DETAIL OF QUONSET HUT SHOWING BOARDWALK ON TUNDRA CONNECTING ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    8. DETAIL OF QUONSET HUT SHOWING BOARDWALK ON TUNDRA CONNECTING QUONSET HUTS THAT DID NOT HAVE INTERCONNNECTING WOOD FRAME CORRIDORS - Fort Randall, Neuro-Psychiatric Ward, Northeast of intersection of California Boulevard & Nurse Drive, Cold Bay, Aleutian Islands, AK

  13. Carbon loss from an unprecedented Arctic tundra wildfire.

    PubMed

    Mack, Michelle C; Bret-Harte, M Syndonia; Hollingsworth, Teresa N; Jandt, Randi R; Schuur, Edward A G; Shaver, Gaius R; Verbyla, David L

    2011-07-27

    Arctic tundra soils store large amounts of carbon (C) in organic soil layers hundreds to thousands of years old that insulate, and in some cases maintain, permafrost soils. Fire has been largely absent from most of this biome since the early Holocene epoch, but its frequency and extent are increasing, probably in response to climate warming. The effect of fires on the C balance of tundra landscapes, however, remains largely unknown. The Anaktuvuk River fire in 2007 burned 1,039 square kilometres of Alaska's Arctic slope, making it the largest fire on record for the tundra biome and doubling the cumulative area burned since 1950 (ref. 5). Here we report that tundra ecosystems lost 2,016 ± 435 g C m(-2) in the fire, an amount two orders of magnitude larger than annual net C exchange in undisturbed tundra. Sixty per cent of this C loss was from soil organic matter, and radiocarbon dating of residual soil layers revealed that the maximum age of soil C lost was 50 years. Scaled to the entire burned area, the fire released approximately 2.1 teragrams of C to the atmosphere, an amount similar in magnitude to the annual net C sink for the entire Arctic tundra biome averaged over the last quarter of the twentieth century. The magnitude of ecosystem C lost by fire, relative to both ecosystem and biome-scale fluxes, demonstrates that a climate-driven increase in tundra fire disturbance may represent a positive feedback, potentially offsetting Arctic greening and influencing the net C balance of the tundra biome.

  14. Above and below ground carbon stocks in northeast Siberia tundra ecosystems: a comparison between disturbed and undisturbed areas

    NASA Astrophysics Data System (ADS)

    Weber, L. R.; Pena, H., III; Curasi, S. R.; Ramos, E.; Loranty, M. M.; Alexander, H. D.; Natali, S.

    2014-12-01

    Changes in arctic tundra vegetation have the potential to alter the regional carbon (C) budget, with feedback implications for global climate. A number of studies have documented both widespread increases in productivity as well as shifts in the dominant vegetation. In particular, shrubs have been replacing other vegetation, such as graminoids, in response to changes in their environment. Shrub expansion is thought to be facilitated by exposure of mineral soil and increased nutrient availability, which are often associated with disturbance. Such disturbances can be naturally occurring, typically associated with permafrost degradation or with direct anthropogenic causes such as infrastructure development. Mechanical disturbance associated with human development is not uncommon in tundra and will likely become more frequent as warming makes the Arctic more hospitable for resource extraction and other human activities. As such, this type of disturbance will become an increasingly important component of tundra C balance. Both increased productivity and shrub expansion have clear impacts on ecosystem C cycling through increased C uptake and aboveground (AG) storage. What is less clear, however, are the concurrent changes in belowground (BG) C storage. Here we inventoried AG and BG C stocks in disturbed and undisturbed tundra ecosystems to determine the effects of disturbance on tundra C balance. We measured differences in plant functional type, AG and BG biomass, soil C, and specific leaf area (SLA) for the dominant shrub (Salix) in 2 tundra ecosystems in northern Siberia—an undisturbed moist acidic tundra and an adjacent ecosystem that was used as a road ~50 years ago. Deciduous shrubs and grasses dominated both ecosystems, but biomass for both functional types was higher in the disturbed area. SLA was also higher inside the disturbance. Conversely, nonvascular plants and evergreen shrubs were less abundant in the disturbed area. BG plant biomass was substantially

  15. ON TEACHING ARCELLANA'S "THE MATS".

    ERIC Educational Resources Information Center

    ANDERSON, TOMMY R.

    FRANCISCO ARCELLANA'S "THE MATS," LIKE ANY WELL-CONSTRUCTED SHORT STORY, CAN SERVE AS AN IMPORTANT TEACHING DEVICE IN GUIDING STUDENTS, ESPECIALLY THOSE LEARNING ENGLISH AS A SECOND LANGUAGE, TO READ WITH UNDERSTANDING AND APPRECIATION, THE TECHNIQUES OF CONVERTING VERBALS BACK INTO VERBS, REPLACING ALL PRONOUNS WITH THEIR ANTECEDENTS IN PARALLEL…

  16. Stiffness of compressed fiber mats

    NASA Astrophysics Data System (ADS)

    Åström, J. A.; Mäkinen, J. P.; Hirvonen, H.; Timonen, J.

    2000-11-01

    We investigate, using an analytical and a numerical model, the in-plane stiffness of fiber mats. A mat is modeled by randomly depositing thin linear-elastic fibers on top of each other under the influence of an external pressure. The external pressure has the effect of bending the fibers over each other. The fibers are assumed rigidly bonded at contacts. For a low external pressure the stiffness of the mat deviates from that of its two-dimensional projection only by a geometrical factor, and the effective Poisson contraction is close to zero. For higher pressures, stiffness is governed by two competing effects and a maximum appears in the stiffness. The effective Poisson ratio is clearly negative in this range. An approximative analytical description is developed for the stiffness of mats formed under low external pressure. The stiffness is given as a function of only a few parameters: the degree of bonding, the dimensions of the fibers, the elastic constants of the fiber material, and the density of fibers.

  17. HiMAT in flight

    NASA Technical Reports Server (NTRS)

    1980-01-01

    The HiMAT (Highly Maneuverable Aircraft Technology) subscale research vehicle, seen here during a research flight, was flown by the NASA Dryden Flight Research Center, Edwards, California, from mid 1979 to January 1983. The aircraft demonstrated advanced fighter technologies that have been used in the development of many modern high performance military aircraft. Two vehicles were used in the research program conducted jointly by NASA and the Air Force Flight Dynamics Laboratory, Wright-Patterson AFB, Ohio. The two vehicles, flown a total of 26 times, provided data on the use of composites, aeroelastic tailoring, close-coupled canards and winglets. They investigated the interaction of these then-new technologies upon each other. About one-half the size of a standard manned fighter and powered by a small jet engine, the HiMAT vehicles were launched from NASA's B-52 carrier aircraft at an altitude of about 45,000 feet. They were flown remotely by a NASA research pilot from a ground station with the aid of a television camera mounted in the HiMAT cockpits. Technologies tested on the HiMAT vehicles appearing later on other aircraft include the extensive use of composites common now on military and commercial aircraft; rear-mounted wing and forward canard configuration used very successfully on the X-29 research aircraft flown at Dryden; and winglets, now used on many private and commercial aircraft to lessen wingtip drag and enhance fuel savings.

  18. Sparse Coding for Alpha Matting.

    PubMed

    Johnson, Jubin; Varnousfaderani, Ehsan Shahrian; Cholakkal, Hisham; Rajan, Deepu

    2016-07-01

    Existing color sampling-based alpha matting methods use the compositing equation to estimate alpha at a pixel from the pairs of foreground ( F ) and background ( B ) samples. The quality of the matte depends on the selected ( F,B ) pairs. In this paper, the matting problem is reinterpreted as a sparse coding of pixel features, wherein the sum of the codes gives the estimate of the alpha matte from a set of unpaired F and B samples. A non-parametric probabilistic segmentation provides a certainty measure on the pixel belonging to foreground or background, based on which a dictionary is formed for use in sparse coding. By removing the restriction to conform to ( F,B ) pairs, this method allows for better alpha estimation from multiple F and B samples. The same framework is extended to videos, where the requirement of temporal coherence is handled effectively. Here, the dictionary is formed by samples from multiple frames. A multi-frame graph model, as opposed to a single image as for image matting, is proposed that can be solved efficiently in closed form. Quantitative and qualitative evaluations on a benchmark dataset are provided to show that the proposed method outperforms the current stateoftheart in image and video matting.

  19. Sparse Coding for Alpha Matting.

    PubMed

    Johnson, Jubin; Varnousfaderani, Ehsan; Cholakkal, Hisham; Rajan, Deepu

    2016-04-21

    Existing color sampling based alpha matting methods use the compositing equation to estimate alpha at a pixel from pairs of foreground (F) and background (B) samples. The quality of the matte depends on the selected (F,B) pairs. In this paper, the matting problem is reinterpreted as a sparse coding of pixel features, wherein the sum of the codes gives the estimate of the alpha matte from a set of unpaired F and B samples. A non-parametric probabilistic segmentation provides a certainty measure on the pixel belonging to foreground or background, based on which a dictionary is formed for use in sparse coding. By removing the restriction to conform to (F,B) pairs, this method allows for better alpha estimation from multiple F and B samples. The same framework is extended to videos, where the requirement of temporal coherence is handled effectively. Here, the dictionary is formed by samples from multiple frames. A multi-frame graph model, as opposed to a single image as for image matting, is proposed that can be solved efficiently in closed form. Quantitative and qualitative evaluations on a benchmark dataset are provided to show that the proposed method outperforms current state-of-the-art in image and video matting.

  20. Organic Carbon Transformation and Mercury Methylation in Tundra Soils from Barrow Alaska

    DOE Data Explorer

    Liang, L.; Wullschleger, Stan; Graham, David; Gu, B.; Yang, Ziming

    2016-04-20

    This dataset includes information on soil labile organic carbon transformation and mercury methylation for tundra soils from Barrow, Alaska. The soil cores were collected from high-centered polygon (trough) at BEO and were incubated under anaerobic laboratory conditions at both freezing and warming temperatures for up to 8 months. Soil organic carbon including reducing sugars, alcohols, and organic acids were analyzed, and CH4 and CO2 emissions were quantified. Net production of methylmercury and Fe(II)/Fe(total) ratio were also measured and provided in this dataset.

  1. Anoxic carbon flux in photosynthetic microbial mats as revealed by metatranscriptomics.

    PubMed

    Burow, Luke C; Woebken, Dagmar; Marshall, Ian P G; Lindquist, Erika A; Bebout, Brad M; Prufert-Bebout, Leslie; Hoehler, Tori M; Tringe, Susannah G; Pett-Ridge, Jennifer; Weber, Peter K; Spormann, Alfred M; Singer, Steven W

    2013-04-01

    Photosynthetic microbial mats possess extraordinary phylogenetic and functional diversity that makes linking specific pathways with individual microbial populations a daunting task. Close metabolic and spatial relationships between Cyanobacteria and Chloroflexi have previously been observed in diverse microbial mats. Here, we report that an expressed metabolic pathway for the anoxic catabolism of photosynthate involving Cyanobacteria and Chloroflexi in microbial mats can be reconstructed through metatranscriptomic sequencing of mats collected at Elkhorn Slough, Monterey Bay, CA, USA. In this reconstruction, Microcoleus spp., the most abundant cyanobacterial group in the mats, ferment photosynthate to organic acids, CO2 and H2 through multiple pathways, and an uncultivated lineage of the Chloroflexi take up these organic acids to store carbon as polyhydroxyalkanoates. The metabolic reconstruction is consistent with metabolite measurements and single cell microbial imaging with fluorescence in situ hybridization and NanoSIMS.

  2. Electrospun chitosan/polyvinyl alcohol nanofibre mats for wound healing.

    PubMed

    Charernsriwilaiwat, Natthan; Rojanarata, Theerasak; Ngawhirunpat, Tanasait; Opanasopit, Praneet

    2014-04-01

    Chitosan (CS) aqueous salt blended with polyvinyl alcohol (PVA) nanofibre mats was prepared by electrospinning. CS was dissolved with hydroxybenzotriazole (HOBt), thiamine pyrophosphate (TPP) and ethylenediaminetetraacetic acid (EDTA) in distilled water without the use of toxic or hazardous solvents. The CS aqueous salts were blended with PVA at different weight ratios, and the effect of the solution ratios was investigated. The morphologies and mechanical and swelling properties of the generated fibres were analysed. Indirect cytotoxicity studies indicated that the CS/PVA nanofibre mats were non-toxic to normal human fibroblast cells. The CS-HOBt/PVA and CS-EDTA/PVA nanofibre mats demonstrated satisfactory antibacterial activity against both gram-positive and gram-negative bacteria, and an in vivo wound healing test showed that the CS-EDTA/PVA nanofibre mats performed better than gauze in decreasing acute wound size during the first week after tissue damage. In conclusion, the biodegradable, biocompatible and antibacterial CS-EDTA/PVA nanofibre mats have potential for use as wound dressing materials.

  3. The Extracellular Matrix in Photosynthetic Mats: A Cyanobacterial Gingerbread House

    NASA Astrophysics Data System (ADS)

    Stuart, R.; Stannard, W.; Bebout, B.; Pett-Ridge, J.; Mayali, X.; Weber, P. K.; Lipton, M. S.; Lee, J.; Everroad, R. C.; Thelen, M.

    2014-12-01

    Hypersaline laminated cyanobacterial mats are excellent model systems for investigating photoautotrophic contributions to biogeochemical cycling on a millimeter scale. These self-sustaining ecosystems are characterized by steep physiochemical gradients that fluctuate dramatically on hour timescales, providing a dynamic environment to study microbial response. However, elucidating the distribution of energy from light absorption into biomass requires a complete understanding of the various constituents of the mat. Extracellular polymeric substances (EPS), which can be composed of proteins, polysaccharides, lipids and DNA are a major component of these mats and may function in the redistribution of nutrients and metabolites within the community. To test this notion, we established a model mat-building culture for comparison with the phylogenetically diverse natural mat communities. In these two systems we determined how proteins and glycans in the matrix changed as a function of light and tracked nutrient flow from the matrix. Using mass spectrometry metaproteomics analysis, we found homologous proteins in both field and culture extracellular matrix that point to cyanobacterial turnover of amino acids, inorganic nutrients, carbohydrates and nucleic acids from the EPS. Other abundant functions identified included oxidative stress response from both the cyanobacteria and heterotrophs and cyanobacterial structural proteins that may play a role in mat cohesion. Several degradative enzymes also varied in abundance in the EPS in response to light availability, suggesting active secretion. To further test cyanobacterial EPS turnover, we generated isotopically-labeled EPS and used NanoSIMS to trace uptake of this labeled EPS. Our findings suggest Cyanobacteria may facilitate nutrient transfer to other groups, as well as uptake of their own products through degradation of EPS components. This work provides evidence for the essential roles of EPS for storage, structural

  4. Regulatory Actions - Final Mercury and Air Toxics Standards (MATS) for Power Plants

    EPA Pesticide Factsheets

    The U.S. Environmental Protection Agency (EPA) has proposed Mercury and Air Toxics Standards (MATS) for power plants to limit mercury, acid gases and other toxic pollution from power plants. This page describes Federal regulatory actions.

  5. Regulatory Actions - Proposed Mercury and Air Toxics Standards (MATS) for Power Plants

    EPA Pesticide Factsheets

    The U.S. Environmental Protection Agency (EPA) has proposed Mercury and Air Toxics Standards (MATS) for power plants to limit mercury, acid gases and other toxic pollution from power plants. This page includes supporting documentation and

  6. ProMAT: protein microarray analysis tool

    SciTech Connect

    White, Amanda M.; Daly, Don S.; Varnum, Susan M.; Anderson, Kevin K.; Bollinger, Nikki; Zangar, Richard C.

    2006-04-04

    Summary: ProMAT is a software tool for statistically analyzing data from ELISA microarray experiments. The software estimates standard curves, sample protein concentrations and their uncertainties for multiple assays. ProMAT generates a set of comprehensive figures for assessing results and diagnosing process quality. The tool is available for Windows or Mac, and is distributed as open-source Java and R code. Availability: ProMAT is available at http://www.pnl.gov/statistics/ProMAT. ProMAT requires Java version 1.5.0 and R version 1.9.1 (or more recent versions) which are distributed with the tool.

  7. Phenological response of tundra plants to background climate variation tested using the International Tundra Experiment.

    PubMed

    Oberbauer, S F; Elmendorf, S C; Troxler, T G; Hollister, R D; Rocha, A V; Bret-Harte, M S; Dawes, M A; Fosaa, A M; Henry, G H R; Høye, T T; Jarrad, F C; Jónsdóttir, I S; Klanderud, K; Klein, J A; Molau, U; Rixen, C; Schmidt, N M; Shaver, G R; Slider, R T; Totland, Ø; Wahren, C-H; Welker, J M

    2013-08-19

    The rapidly warming temperatures in high-latitude and alpine regions have the potential to alter the phenology of Arctic and alpine plants, affecting processes ranging from food webs to ecosystem trace gas fluxes. The International Tundra Experiment (ITEX) was initiated in 1990 to evaluate the effects of expected rapid changes in temperature on tundra plant phenology, growth and community changes using experimental warming. Here, we used the ITEX control data to test the phenological responses to background temperature variation across sites spanning latitudinal and moisture gradients. The dataset overall did not show an advance in phenology; instead, temperature variability during the years sampled and an absence of warming at some sites resulted in mixed responses. Phenological transitions of high Arctic plants clearly occurred at lower heat sum thresholds than those of low Arctic and alpine plants. However, sensitivity to temperature change was similar among plants from the different climate zones. Plants of different communities and growth forms differed for some phenological responses. Heat sums associated with flowering and greening appear to have increased over time. These results point to a complex suite of changes in plant communities and ecosystem function in high latitudes and elevations as the climate warms.

  8. Vertical electrical resistivity sounding (VERS) of tundra and forest tundra soils of Yamal region

    NASA Astrophysics Data System (ADS)

    Alekseev, Ivan; Kostecki, Jakub; Abakumov, Evgeny

    2017-01-01

    The aim of the study was to determine electrical resistivity peculiarities of tundra and forest tundra soils and soil-permafrost layers of the Yamal region. Measurements of electrical resistivity of soil and permafrost strata were performed with a portable device LandMapper (to a depth of 300-500 cm). These measurements allow determination of the values of apparent electrical resistivity of soils and permafrost at different depths and determination of the depths of the permafrost table on each key plot. It was found that there are several trends in vertical distribution of apparent electrical resistivity values. The first trend is a monotonous increase in electrical resistivity values to the depth. It may be explained by the increasing electrical resistivity within the soil depth in relation to the increase in permafrost density. The second trend is a sharp decrease replaced by a gradual increase in electrical resistivity values caused by changing of non-frozen friable debris to frozen massive crystalline rock. These differences were related to the type of landscape: flat lowlands composed of friable grounds underlain by permafrost or friable grounds with permafrost underlain by a rock crystalline layer.

  9. Habitat selection by tundra swans on Northern Alaska breeding grounds

    USGS Publications Warehouse

    Earnst, Susan L.; Rothe, T.

    2004-01-01

    Habitat selection by the Tundra Swan (Cygnus columbianus columbianus) was evaluated on the Colville River Delta prior to oil field development (1982-1989). Tundra Swan territories comprised a lake, used for refuge and foraging, and terrestrial habitats and ponds near the lakea??s perimeter used for foraging and nesting. Tundra swan sightings from early and late summer aerial surveys were used to investigate habitat selection at the territory and within-territory scale. At the territory or lake scale, swan sightings/lake increased with lake size, and increased from discrete to tapped (i.e., connected to a river channel) to drained lakes within size categories. Overall, 49% of the variation in swan sightings/lake was explained by lake size and type, a size-x-type interaction term, and the proportion of lake perimeter comprised of Halophytic Ponds and Halophytic Wet Meadows. At the within-territory or within-lake scale, foraging swans significantly selected Halophytic Ponds, Halophytic Wet Meadows, and Fresh Ponds relative to Uplands; nesting swans significantly selected Halophytic Ponds and significantly avoided Fresh Wet Meadows relative to Uplands. Vegetation sampling indicated that sites used by Tundra Swans on river channels and tapped lakes were significantly more likely to have Sheathed Pondweed (Potamogeton vaginatus) than control sites. The three major components of Tundra Swan diet were Carex sedges, Sheathed Pondweed, and algae, together comprising 85% of identifiable plant fragments in feces.

  10. Tundra burning in 2007 - Did sea ice retreat matter?

    NASA Astrophysics Data System (ADS)

    Alexeev, Vladimir A.; Euskirchen, Eugénie S.; Cherry, Jessica E.; Busey, Robert C.

    2015-06-01

    The goal of this study was to assess the importance of the 2007 sea ice retreat for hydrologic conditions on the Alaskan North Slope, and how this may have influenced the outbreak of tundra fires in this region. This study concentrates on two years, 2007 and 1996, with different arctic sea ice conditions and tundra fire activity. The year of 2007 is characterized by a low summer sea ice extent (second lowest) and high tundra fire activity, while 1996 had high sea ice extent, and few tundra fires. Atmospheric lateral boundary forcing from the NCEP/NCAR Reanalysis drove the Weather Research and Forecast (WRF) model, along with varying sea ice surface forcing designed to delineate the role of sea ice. WRF runs successfully reproduced the differences between 1996 and 2007. Surprisingly, replacing sea ice conditions in 1996 run by those from 2007 and vice versa (2007 run with 1996 sea ice) did not change the overall picture. The atmospheric circulation in August of 1996 included a significant low-pressure system over the Beaufort and Chukchi Seas. However, in 2007, a high-pressure system dominated the circulation over the Beaufort Sea. It is argued that this difference in large-scale patterns, rather than retreat of sea ice, was responsible for anomalously dry and warm atmospheric conditions over the North Slope in summer and autumn 2007, suitable for high tundra fire activity. Circulation in 2012 is contrasted with that in 2007 to further stress its importance for local weather on the North Slope.

  11. Vegetation shifts observed in arctic tundra 17 years after fire

    USGS Publications Warehouse

    Barrett, Kirsten; Rocha, Adrian V.; van de Weg, Martine Janet; Shaver, Gaius

    2012-01-01

    With anticipated climate change, tundra fires are expected to occur more frequently in the future, but data on the long-term effects of fire on tundra vegetation composition are scarce. This study addresses changes in vegetation structure that have persisted for 17 years after a tundra fire on the North Slope of Alaska. Fire-related shifts in vegetation composition were assessed from remote-sensing imagery and ground observations of the burn scar and an adjacent control site. Early-season remotely sensed imagery from the burn scar exhibits a low vegetation index compared with the control site, whereas the late-season signal is slightly higher. The range and maximum vegetation index are greater in the burn scar, although the mean annual values do not differ among the sites. Ground observations revealed a greater abundance of moss in the unburned site, which may account for the high early growing season normalized difference vegetation index (NDVI) anomaly relative to the burn. The abundance of graminoid species and an absence of Betula nana in the post-fire tundra sites may also be responsible for the spectral differences observed in the remotely sensed imagery. The partial replacement of tundra by graminoid-dominated ecosystems has been predicted by the ALFRESCO model of disturbance, climate and vegetation succession.

  12. Foam-mat Drying Technology: A Review.

    PubMed

    Hardy, Z; Jideani, V A

    2015-07-13

    This article reviews various aspects of foam-mat drying such as foam-mat drying processing technique, main additives used for foam-mat drying, foam-mat drying of liquid and solid foods, quality characteristics of foam-mat dried foods and economic and technical benefits for employing foam-mat drying. Foam-mat drying process is an alternative method which allows the removal of water from liquid materials and pureed materials. In this drying process, a liquid material is converted into foam that is stable by being whipped after adding an edible foaming agent. The stable foam is then spread out in sheet or mat and dried by using hot air (40 -90°C) at atmospheric pressure. Methyl cellulose (0.25 - 2%), egg white (3 - 20%), maltodextrin (0.5 - 05%) and gum Arabic (2 - 9%) are the commonly utilised additives for the foam-mat drying process at the given range, either combined together for their effectiveness or individual effect. The foam-mat drying process is suitable for heat sensitive, viscous and sticky products which cannot be dried using other forms of drying methods such as spray drying because of the state of product. More interest has developed for foam-mat drying because of the simplicity, cost effectiveness, high speed drying and improved product quality it provides.

  13. Links between plant community composition, soil organic matter quality and microbial communities in contrasting tundra habitats.

    PubMed

    Eskelinen, Anu; Stark, Sari; Männistö, Minna

    2009-08-01

    Plant communities, soil organic matter and microbial communities are predicted to be interlinked and to exhibit concordant patterns along major environmental gradients. We investigated the relationships between plant functional type composition, soil organic matter quality and decomposer community composition, and how these are related to major environmental variation in non-acid and acid soils derived from calcareous versus siliceous bedrocks, respectively. We analysed vegetation, organic matter and microbial community compositions from five non-acidic and five acidic heath sites in alpine tundra in northern Europe. Sequential organic matter fractionation was used to characterize organic matter quality and phospholipid fatty acid analysis to detect major variation in decomposer communities. Non-acidic and acidic heaths differed substantially in vegetation composition, and these disparities were associated with congruent shifts in soil organic matter and microbial communities. A high proportion of forbs in the vegetation was positively associated with low C:N and high soluble N:phenolics ratios in soil organic matter, and a high proportion of bacteria in the microbial community. On the contrary, dwarf shrub-rich vegetation was associated with high C:N and low soluble N:phenolics ratios, and a high proportion of fungi in the microbial community. Our study demonstrates a strong link between the plant community composition, soil organic matter quality, and microbial community composition, and that differences in one compartment are paralleled by changes in others. Variation in the forb-shrub gradient of vegetation may largely dictate variations in the chemical quality of organic matter and decomposer communities in tundra ecosystems. Soil pH, through its direct and indirect effects on plant and microbial communities, seems to function as an ultimate environmental driver that gives rise to and amplifies the interactions between above- and belowground systems.

  14. Future distribution of tundra refugia in northern Alaska

    USGS Publications Warehouse

    Hope, Andrew G.; Waltari, Eric; Payer, David C.; Cook, Joseph A.; Talbot, Sandra L.

    2013-01-01

    Climate change in the Arctic is a growing concern for natural resource conservation and management as a result of accelerated warming and associated shifts in the distribution and abundance of northern species. We introduce a predictive framework for assessing the future extent of Arctic tundra and boreal biomes in northern Alaska. We use geo-referenced museum specimens to predict the velocity of distributional change into the next century and compare predicted tundra refugial areas with current land-use. The reliability of predicted distributions, including differences between fundamental and realized niches, for two groups of species is strengthened by fossils and genetic signatures of demographic shifts. Evolutionary responses to environmental change through the late Quaternary are generally consistent with past distribution models. Predicted future refugia overlap managed areas and indicate potential hotspots for tundra diversity. To effectively assess future refugia, variable responses among closely related species to climate change warrants careful consideration of both evolutionary and ecological histories.

  15. A Comparative Review of North American Tundra Delineations

    NASA Technical Reports Server (NTRS)

    Silver, Kirk C.; Carroll, Mark

    2013-01-01

    Recent profound changes have been observed in the Arctic environment, including record low sea ice extents and high latitude greening. Studying the Arctic and how it is changing is an important element of climate change science. The Tundra, an ecoregion of the Arctic, is directly related to climate change due to its effects on the snow ice feedback mechanism and greenhouse gas cycling. Like all ecoregions, the Tundra border is shifting, yet studies and policies require clear delineation of boundaries. There are many options for ecoregion classification systems, as well as resources for creating custom maps. To help decision makers identify the best classification system possible, we present a review of North American Tundra ecoregion delineations and further explore the methodologies, purposes, limitations, and physical properties of five common ecoregion classification systems. We quantitatively compare the corresponding maps by area using a geographic information system.

  16. Structural and functional conservation of fungal MatA and human SRY sex-determining proteins.

    PubMed

    Czaja, Wioletta; Miller, Karen Y; Skinner, Michael K; Miller, Bruce L

    2014-11-17

    Sex determination in animals and fungi is regulated by specific sex-determining genes. The Aspergillus nidulans mating type gene matA and the human SRY (Sex-Determining Region Y) encode proteins containing a single HMG (high-mobility group) domain. Analysis of the amino-acid sequence of MatA and SRY transcription factors revealed significant structural similarity. The human SRY protein is able to functionally replace MatA and drives the sexual cycle in the fungus A. nidulans. Functional studies indicate that SRY drives early fruiting body development, and hybrid MatA protein carrying the SRY HMG box is fully capable of driving both early and late stages of sexual development, including gametogenesis. Our data suggest that SRY and MatA are both structurally and functionally related and conserved in regulating sexual processes. The fundamental mechanisms driving evolution of the genetic pathways underlying sex determination, sex chromosomes and sexual reproduction in eukaryotes appear similar.

  17. Terrimonas arctica sp. nov., isolated from Arctic tundra soil.

    PubMed

    Jiang, Fan; Qiu, Xia; Chang, Xulu; Qu, Zhihao; Ren, Lvzhi; Kan, Wenjing; Guo, Youhao; Fang, Chengxiang; Peng, Fang

    2014-11-01

    A novel, Gram-stain-negative, aerobic, non-motile and rod-shaped bacterium, designated R9-86(T), was isolated from tundra soil collected near Ny-Ålesund, Svalbard Archipelago, Norway (78° N). Growth occurred at 4-28 °C (optimum, 22-25 °C) and at pH 6.0-9.0 (optimum, pH 7.0). Flexirubin-type pigments were absent. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain R9-86(T) belonged to the genus Terrimonas in the family Chitinophagaceae. 16S rRNA gene sequence similarities between strain R9-86(T) and the type strains of species of the genus Terrimonas with validly published names ranged from 93.7 to 95.0%. Strain R9-86(T) contained iso-C(15:1)-G (25.7%), iso-C(15:0) (24.5%), iso-C(17:0)-3OH (18.3%) and summed feature 3 (C(16:1)ω7c and/or C(16:1)ω6c, 8.7%) as its major cellular fatty acids; phosphatidylethanolamine and an unknown polar lipid as its main polar lipids, and MK-7 as its predominant respiratory quinone. The DNA G+C content was 48.4 mol%. On the basis of phenotypic, chemotaxonomic and phylogenetic data, strain R9-86(T) is considered to represent a novel species of the genus Terrimonas, for which the name Terrimonas arctica sp. nov. is proposed. The type strain is R9-86(T) ( =CCTCC AB 2011004(T) =NRRL B-59114(T)).

  18. Mucilaginibacter soli sp. nov., isolated from Arctic tundra soil.

    PubMed

    Jiang, Fan; Dai, Jun; Wang, Yang; Xue, Xiuqing; Xu, Mengbo; Guo, Youhao; Li, Wenxin; Fang, Chengxiang; Peng, Fang

    2012-07-01

    A novel pale-pink-coloured strain, designated R9-65(T), was isolated from a tundra soil near Ny-Ålesund, Svalbard Archipelago, Norway (78° N). The cells were facultatively anaerobic, Gram-staining-negative, non-motile and rod-shaped. Growth occurred at 4-32 °C (optimum, 25-28 °C), at pH 5.0-9.0 (optimum, pH 6.0-7.0) and with 0-1.0% (w/v) NaCl (optimum, no NaCl). Flexirubin-type pigments were absent. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain R9-65(T) belonged to the genus Mucilaginibacter in the family Sphingobacteriaceae. The 16S rRNA gene sequence similarity between strain R9-65(T) and type strains of related species ranged from 93.4 to 96.6%. Strain R9-65(T) contained summed feature 3 (C(16:1)ω7c and/or C(16:1)ω6c, 34.3%) and iso-C(15:0) (20.3%) as major cellular fatty acids, MK-7 as the major respiratory quinone, and phosphatidylethanolamine as the main polar lipid. The DNA G+C content of strain R9-65(T) was 47.2 mol%. On the basis of phylogenetic, physiological and chemotaxonomic data, strain R9-65(T) is considered to represent a novel species of the genus Mucilaginibacter, for which the name Mucilaginibacter soli sp. nov. is proposed. The type strain is R9-65(T) (=CCTCC AB 2010331(T)=NRRL B-59458(T)).

  19. Methylmercury enters an aquatic food web through acidophilic microbial mats in Yellowstone National Park, Wyoming.

    PubMed

    Boyd, Eric S; King, Susan; Tomberlin, Jeffery K; Nordstrom, D Kirk; Krabbenhoft, David P; Barkay, Tamar; Geesey, Gill G

    2009-04-01

    Microbial mats are a visible and abundant life form inhabiting the extreme environments in Yellowstone National Park (YNP), WY, USA. Little is known of their role in food webs that exist in the Park's geothermal habitats. Eukaryotic green algae associated with a phototrophic green/purple Zygogonium microbial mat community that inhabits low-temperature regions of acidic (pH approximately 3.0) thermal springs were found to serve as a food source for stratiomyid (Diptera: Stratiomyidae) larvae. Mercury in spring source water was taken up and concentrated by the mat biomass. Monomethylmercury compounds (MeHg(+)), while undetectable or near the detection limit (0.025 ng l(-1)) in the source water of the springs, was present at concentrations of 4-7 ng g(-1) dry weight of mat biomass. Detection of MeHg(+) in tracheal tissue of larvae grazing the mat suggests that MeHg(+) enters this geothermal food web through the phototrophic microbial mat community. The concentration of MeHg(+) was two to five times higher in larval tissue than mat biomass indicating MeHg(+) biomagnification occurred between primary producer and primary consumer trophic levels. The Zygogonium mat community and stratiomyid larvae may also play a role in the transfer of MeHg(+) to species in the food web whose range extends beyond a particular geothermal feature of YNP.

  20. Methylmercury enters an aquatic food web through acidophilic microbial mats in Yellowstone National Park, Wyoming

    USGS Publications Warehouse

    Boyd, E.S.; King, S.; Tomberlin, J.K.; Nordstrom, D.K.; Krabbenhoft, D.P.; Barkay, T.; Geesey, G.G.

    2009-01-01

    Summary Microbial mats are a visible and abundant life form inhabiting the extreme environments in Yellowstone National Park (YNP), WY, USA. Little is known of their role in food webs that exist in the Park's geothermal habitats. Eukaryotic green algae associated with a phototrophic green/purple Zygogonium microbial mat community that inhabits low-temperature regions of acidic (pH ??? 3.0) thermal springs were found to serve as a food source for stratiomyid (Diptera: Stratiomyidae) larvae. Mercury in spring source water was taken up and concentrated by the mat biomass. Monomethylmercury compounds (MeHg +), while undetectable or near the detection limit (0.025 ng l -1) in the source water of the springs, was present at concentrations of 4-7 ng g-1 dry weight of mat biomass. Detection of MeHg + in tracheal tissue of larvae grazing the mat suggests that MeHg+ enters this geothermal food web through the phototrophic microbial mat community. The concentration of MeHg+ was two to five times higher in larval tissue than mat biomass indicating MeHg+ biomagnification occurred between primary producer and primary consumer trophic levels. The Zygogonium mat community and stratiomyid larvae may also play a role in the transfer of MeHg+ to species in the food web whose range extends beyond a particular geothermal feature of YNP. ?? 2008 The Authors. Journal compilation ?? 2008 Society for Applied Microbiology and Blackwell Publishing Ltd.

  1. Geochemical characterization of Arctic tundra and implications for organic matter degradation

    NASA Astrophysics Data System (ADS)

    Gu, B.; Herndon, E.; Graham, D. E.; Phelps, T. J.; Wullschleger, S. D.; Liang, L.

    2013-12-01

    Tundra soils are uniquely cold terrestrial environments that face irrevocable change under warming climate conditions. Specifically, many tundra soils store large quantities of organic carbon that may rapidly degrade with increasing temperature, releasing C into drainage systems or to the atmosphere as greenhouse gases (CH4, CO2). In order to predict rates of C release from tundra soils, it is necessary to quantify how biogeochemical factors such as pore water chemistry, terminal electron acceptor availability, and mineral adsorption regulate rates and pathways of soil organic carbon (SOC) degradation. In this study, we examine spatial and seasonal patterns of aqueous geochemistry and SOC characteristics from across an area of tundra landscape in the Arctic. We aim to identify factors that increase or decrease rates of SOC degradation, including: 1) the composition of organic substrates, 2) abundance of terminal electron acceptors, 3) vertical transport and spatial variability of both organic and inorganic compounds, and 4) adsorption to mineral surfaces. Soil and water samples were obtained from the Barrow Environmental Observatory (BEO) in northern Alaska as part of the Next Generation Ecosystem Experiment (NGEE) Arctic project. Tundra at the BEO is characterized by permafrost below ~60 cm and polygonal features that induce topographic gradients of water saturation. Soils are organic-rich and store large amounts of slowly decomposing plant material. Chemical and physical extractions were used to obtain operationally-defined pools of SOC to evaluate their mineral associations. Water samples collected in early and late summers were analyzed for pH, electrical conductivity, and dissolved concentrations of anions, cations, organic carbon, inorganic carbon, and ferrous iron, as well as dissolved and soil gases (CH4 and CO2). We observe a steep pH gradient, with acidic pH in surface waters and near neutral pH in pore waters >20 cm below the surface. Dissolved organic

  2. Expansion of forest stands into tundra in the Noatak National Preserve, northwest Alaska

    USGS Publications Warehouse

    Suarez, F.; Binkley, D.; Kaye, M.W.; Stottlemyer, R.

    1999-01-01

    Temperatures across the northern regions of North America have been increasing for 150 years, and forests have responded to this increase. In the Noatak National Preserve in Alaska, white spruce (Picea glauca [Moench] Voss) forests reach their northern limit, occurring primarily on well-drained sites and as gallery forests along streams. Rolling plateaus of tundra separate the white spruce forests into disjunct stands. We examined patterns of tree age, tree growth, and tree encroachment into tundra ecosystems in six stands along the Agashashok River. Warming over the past 150 years appears to have increased tree growth and resulted in forest expansion into adjacent tundra ecosystems. The forest/tundra ecotone shifted by about 80 to 100 m into the tundra in the past 200 years, as evidenced by declining maximum tree age with distance towards the tundra. The decadal-scale pattern of tree establishment at the farthest extent of trees into the tundra (the tundra-forest ecotone) correlated with the detrended growth index for trees within the forests; climate conditions that led to higher tree growth appeared to foster tree establishment in the tundra. This recent forest expansion has occurred across topographic boundaries, from well-drained soils on slopes onto poorly drained, flatter areas of tundra. Further expansion of the forests may be limited by more severe wind exposure and poor drainage that make the majority of tundra less suitable for trees.

  3. Water Status of Arctic Tundra Plants During the Winter-Spring Transition

    NASA Astrophysics Data System (ADS)

    Oberbauer, S. F.; Olivas, P. C.; Moser, J.; Starr, G.; Mortazavi, B.

    2012-12-01

    The arctic winter-spring transition when full snow cover rapidly changes to snow-free conditions potentially represents a time of physiological stress for tundra plants. Plants that have been subjected to freezing temperatures for several months over winter are suddenly exposed to high radiation loads from clear skies and reflection from unmelted snow. Water uptake at this time may be limited by low stem temperatures and cold or even frozen soils. Because of these potential stresses it may be advantageous for plants to delay photosynthetic activity and water loss until soils are warmer. However, given the short length of the growing season, the optimal strategy for plants may be to maximize carbon uptake and begin photosynthesis and growth as soon as possible after snowmelt. Some tundra evergreens even photosynthesize under snow cover. To test the hypothesis that plant water stress increases immediately following loss of snow cover, we investigated xylem and leaf osmotic potentials of evergreen tundra species before and immediately after snowmelt. We also compared these measurements with summer and winter measurements. Our study was conducted in moist acidic tundra near Toolik Field Station in the northern foothills of the Brooks Range, Alaska. Xylem water potentials were measured by Scholander pressure chamber and osmotic potentials by psychrometry of cell sap expressed from frozen (-80 °C) leaf tissue. Xylem water potentials under snow were generally higher than those of plants recently released from snow. Osmotic potentials measured before and after snowmelt did not show evidence of strong changes. Some species, such as Ledum palustre, maintained high water potentials both under snow and shortly after snow melt. With only a few exceptions, water potentials just after melt out were generally higher than those after soils had warmed and plants had greened up. Low water potentials (< -3 MPa) were most commonly found in Cassiope tetragona, a snowbed

  4. Biofilm/Mat assays for budding yeast.

    PubMed

    Cullen, Paul J

    2015-02-02

    Many microbial species form biofilms/mats under nutrient-limiting conditions, and fungal pathogens rely on this social behavior for virulence. In budding yeast, mat formation is dependent on the mucin-like flocculin Flo11, which promotes cell-to-cell and cell-to-substrate adhesion in mats. The biofilm/mat assays described here allow the evaluation of the role of Flo11 in the formation of mats. Cells are grown on surfaces with different degrees of rigidity to assess their expansion and three-dimensional architecture, and the cells are also exposed to plastic surfaces to quantify their adherence. These assays are broadly applicable to studying biofilm/mat formation in microbial species.

  5. Unequal Recombination and Evolution of the Mating-Type (MAT) Loci in the Pathogenic Fungus Grosmannia clavigera and Relatives

    PubMed Central

    Tsui, Clement K.-M.; DiGuistini, Scott; Wang, Ye; Feau, Nicolas; Dhillon, Braham; Bohlmann, Jörg; Hamelin, Richard C.

    2013-01-01

    Sexual reproduction in fungi is regulated by the mating-type (MAT) locus where recombination is suppressed. We investigated the evolution of MAT loci in eight fungal species belonging to Grosmannia and Ophiostoma (Sordariomycetes, Ascomycota) that include conifer pathogens and beetle symbionts. The MAT1-2 idiomorph/allele was identified from the assembled and annotated Grosmannia clavigera genome, and the MAT locus is flanked by genes coding for cytoskeleton protein (SLA) and DNA lyase. The synteny of these genes is conserved and consistent with other members in Ascomycota. Using sequences from SLA and flanking regions, we characterized the MAT1-1 idiomorph from other isolates of G. clavigera and performed dotplot analysis between the two idiomorphs. Unexpectedly, the MAT1-2 idiomorph contains a truncated MAT1-1-1 gene upstream of the MAT1-2-1 gene that bears the high-mobility-group domain. The nucleotide and amino acid sequence of the truncated MAT1-1-1 gene is similar to its homologous copy in the MAT1-1 idiomorph in the opposite mating-type isolate, except that positive selection is acting on the truncated gene and the alpha(α)-box that encodes the transcription factor has been deleted. The MAT idiomorphs sharing identical gene organization were present in seven additional species in the Ophiostomatales, suggesting that the presence of truncated MAT1-1-1 gene is a general pattern in this order. We propose that an ancient unequal recombination event resulted in the ancestral MAT1-1-1 gene integrated into the MAT1-2 idiomorph and surviving as the truncated MAT1-1-1 genes. The α-box domain of MAT1-1-1 gene, located at the same MAT locus adjacent to the MAT1-2-1 gene, could have been removed by deletion after recombination due to mating signal interference. Our data confirmed a 1:1 MAT/sex ratio in two pathogen populations, and showed that all members of the Ophiostomatales studied here including those that were previously deemed asexual have the potential to

  6. Direct piezoelectric responses of soft composite fiber mats

    NASA Astrophysics Data System (ADS)

    Varga, M.; Morvan, J.; Diorio, N.; Buyuktanir, E.; Harden, J.; West, J. L.; Jákli, A.

    2013-04-01

    Recently soft fiber mats electrospun from solutions of Barium Titanate (BT) ferroelectric ceramics particles and polylactic acid (PLA) were found to have large (d33 ˜ 1 nm/V) converse piezoelectric signals offering a myriad of applications ranging from active implants to smart textiles. Here, we report direct piezoelectric measurements (electric signals due to mechanical stress) of the BT/PLA composite fiber mats at several BT concentrations. A homemade testing apparatus provided AC stresses in the 50 Hz-1.5 kHz-frequency range. The piezoelectric constant d33 ˜ 0.5 nC/N and the compression modulus Y ˜ 104-105 Pa found are in agreement with the prior converse piezoelectric and compressibility measurements. Importantly, the direct piezoelectric signal is large enough to power a small LCD by simple finger tapping of a 0.15 mm thick 2-cm2 area mat. We propose using these mats in active Braille cells and in liquid crystal writing tablets.

  7. Bentonite mat demonstration. Final report

    SciTech Connect

    Serrato, M.G.

    1994-12-30

    The Bentonite Mat Demonstration was developed to provide the Environmental Restoration Department with field performance characteristics and engineering data for an alternative closure cover system configuration. The demonstration was initiated in response to regulatory concerns regarding the use of an alternative cover system for future design configurations. These design considerations are in lieu of the US Environmental Protection Agency (EPA) Recommended Design for Closure Cover Systems and specifically a single compacted kaolin clay layer with a hydraulic conductivity of 1 {times} 10{sup {minus}7} cm/sec. This alternative configuration is a composite geosynthetic material hydraulic barrier consisting from bottom to top: 2 ft compacted sandy clay layer (typical local Savannah River Site soil type) that is covered by a bentonite mat--geosynthetic clay liner (GCL) and is overlaid by a 40 mil High Density Polyethylene (HDPE) geomembrane--flexible membrane liner. This effort was undertaken to obtain and document the necessary field performance/engineering data for future designs and meet regulatory technical requirements for an alternative cover system configuration. The composite geosynthetic materials hydraulic barrier is the recommended alternative cover system configuration for containment of hazardous and low level radiological waste layers that have a high potential of subsidence to be used at the Savannah River Site (SRS). This alternative configuration mitigates subsidence effects in providing a flexible, lightweight cover system to maintain the integrity of the closure. The composite geosynthetic materials hydraulic barrier is recommended for the Sanitary Landfill and Low Level Radiological Waste Disposal Facility (LLRWDF) Closures.

  8. MatLab Script and Functional Programming

    NASA Technical Reports Server (NTRS)

    Shaykhian, Gholam Ali

    2007-01-01

    MatLab Script and Functional Programming: MatLab is one of the most widely used very high level programming languages for scientific and engineering computations. It is very user-friendly and needs practically no formal programming knowledge. Presented here are MatLab programming aspects and not just the MatLab commands for scientists and engineers who do not have formal programming training and also have no significant time to spare for learning programming to solve their real world problems. Specifically provided are programs for visualization. The MatLab seminar covers the functional and script programming aspect of MatLab language. Specific expectations are: a) Recognize MatLab commands, script and function. b) Create, and run a MatLab function. c) Read, recognize, and describe MatLab syntax. d) Recognize decisions, loops and matrix operators. e) Evaluate scope among multiple files, and multiple functions within a file. f) Declare, define and use scalar variables, vectors and matrices.

  9. 14. VIEW FROM TUNDRA CURVES (ON TRAIL RIDGE ROAD) SHOWING ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    14. VIEW FROM TUNDRA CURVES (ON TRAIL RIDGE ROAD) SHOWING FALL RIVER ROAD RISING FROM BENEATH CHAPIN PASS (AT EXTREME RIGHT) TO FALL RIVER PASS (FAR LEFT). - Fall River Road, Between Estes Park & Fall River Pass, Estes Park, Larimer County, CO

  10. DOES NITROGEN PARTITIONING PROMOTE SPECIES DIVERSITY IN ARCTIC TUSSOCK TUNDRA?

    EPA Science Inventory

    We used 15N soil-labeling techniques to examine how the dominant species in a N-limited, tussock tundra plant community partitioned soil N, and how such partitioning may contribute to community organization. The five most productive species were well differentiated with respect ...

  11. A Microwave Radiance Assimilation Study for a Tundra Snowpack

    NASA Technical Reports Server (NTRS)

    Kim, Edward; Durand, Michael; Margulis, Steve; England, Anthony

    2010-01-01

    Recent studies have begun exploring the assimilation of microwave radiances for the modeling and retrieval of snow properties. At a point scale, and for short durations (i week), radiance assimilation (RA) results are encouraging. However, in order to determine how practical RA might be for snow retrievals when applied over longer durations, larger spatial scales, and/or different snow types, we must expand the scope of the tests. In this paper we use coincident microwave radiance measurements and station data from a tundra site on the North Slope of Alaska. The field data are from the 3rd Radio-brightness Energy Balance Experiment (REBEX-3) carried out in 1994-95 by the University of Michigan. This dataset will provide a test of RA over months instead of one week, and for a very different type of snow than previous snow RA studies. We will address the following questions: flow well can a snowpack physical model (SM), forced with local weather, match measured conditions for a tundra snowpack?; How well can a microwave emission model, driven by the snowpack model, match measured microwave brightnesses for a tundra snowpack?; How well does RA increase or decrease the fidelity of estimates of snow depth and temperatures for a tundra snowpack?

  12. Acidobacteria dominate the active bacterial communities of Arctic tundra with widely divergent winter-time snow accumulation and soil temperatures.

    PubMed

    Männistö, Minna K; Kurhela, Emilia; Tiirola, Marja; Häggblom, Max M

    2013-04-01

    The timing and extent of snow cover is a major controller of soil temperature and hence winter-time microbial activity and plant diversity in Arctic tundra ecosystems. To understand how snow dynamics shape the bacterial communities, we analyzed the bacterial community composition of windswept and snow-accumulating shrub-dominated tundra heaths of northern Finland using DNA- and RNA-based 16S rRNA gene community fingerprinting (terminal restriction fragment polymorphism) and clone library analysis. Members of the Acidobacteria and Proteobacteria dominated the bacterial communities of both windswept and snow-accumulating habitats with the most abundant phylotypes corresponding to subdivision (SD) 1 and 2 Acidobacteria in both the DNA- and RNA-derived community profiles. However, different phylotypes within Acidobacteria were found to dominate at different sampling dates and in the DNA- vs. RNA-based community profiles. The results suggest that different species within SD1 and SD2 Acidobacteria respond to environmental conditions differently and highlight the wide functional diversity of these organisms even within the SD level. The acidic tundra soils dominated by ericoid shrubs appear to select for diverse stress-tolerant Acidobacteria that are able to compete in the nutrient poor, phenolic-rich soils. Overall, these communities seem stable and relatively insensitive to the predicted changes in the winter-time snow cover.

  13. Asticcacaulis benevestitus sp. nov., a psychrotolerant, dimorphic, prosthecate bacterium from tundra wetland soil.

    PubMed

    Vasilyeva, Lina V; Omelchenko, Marina V; Berestovskaya, Yulia Y; Lysenko, Anatolii M; Abraham, Wolf-Rainer; Dedysh, Svetlana N; Zavarzin, George A

    2006-09-01

    A Gram-negative, aerobic, heterotrophic, non-pigmented, dimorphic prosthecate bacterium was isolated from tundra wetland soil and designated strain Z-0023(T). Cells of this strain had a dimorphic life cycle and developed a non-adhesive stalk at a site not coincident with the centre of the cell pole, a characteristic typical of representatives of the genus Asticcacaulis. A highly distinctive feature of cells of strain Z-0023(T) was the presence of a conical, bell-shaped sheath when grown at low temperature. This prosthecate bacterium was a psychrotolerant, moderately acidophilic organism capable of growth between 4 and 28 degrees Celsius (optimum 15-20 degrees Celsius) and between pH 4.5 and 8.0 (optimum 5.6-6.0). The major phospholipid fatty acid was 18 : 1omega7c and the major phospholipids were phosphatidylglycerols. The G+C content of the DNA was 60.4 mol%. On the basis of 16S rRNA gene sequence similarity, strain Z-0023(T) was most closely related to Asticcacaulis biprosthecium (98 % similarity), Asticcacaulis taihuensis (98 %) and Asticcacaulis excentricus (95 %). However, low levels of DNA-DNA relatedness to these organisms and a number of distinctive features of the tundra wetland isolate indicated that it represented a novel species of the genus Asticcacaulis, for which the name Asticcacaulis benevestitus sp. nov. is proposed. The type strain is Z-0023(T) (=DSM 16100(T)=ATCC BAA-896(T)).

  14. Bacterial community structure and soil properties of a subarctic tundra soil in Council, Alaska.

    PubMed

    Kim, Hye Min; Jung, Ji Young; Yergeau, Etienne; Hwang, Chung Yeon; Hinzman, Larry; Nam, Sungjin; Hong, Soon Gyu; Kim, Ok-Sun; Chun, Jongsik; Lee, Yoo Kyung

    2014-08-01

    The subarctic region is highly responsive and vulnerable to climate change. Understanding the structure of subarctic soil microbial communities is essential for predicting the response of the subarctic soil environment to climate change. To determine the composition of the bacterial community and its relationship with soil properties, we investigated the bacterial community structure and properties of surface soil from the moist acidic tussock tundra in Council, Alaska. We collected 70 soil samples with 25-m intervals between sampling points from 0-10 cm to 10-20 cm depths. The bacterial community was analyzed by pyrosequencing of 16S rRNA genes, and the following soil properties were analyzed: soil moisture content (MC), pH, total carbon (TC), total nitrogen (TN), and inorganic nitrogen (NH4+ and NO3-). The community compositions of the two different depths showed that Alphaproteobacteria decreased with soil depth. Among the soil properties measured, soil pH was the most significant factor correlating with bacterial community in both upper and lower-layer soils. Bacterial community similarity based on jackknifed unweighted unifrac distance showed greater similarity across horizontal layers than through the vertical depth. This study showed that soil depth and pH were the most important soil properties determining bacterial community structure of the subarctic tundra soil in Council, Alaska.

  15. Emissions of biogenic sulfur gases from Alaskan tundra

    NASA Technical Reports Server (NTRS)

    Hines, Mark E.; Morrison, Michael C.

    1992-01-01

    Fluxes of the biogenic sulfur gases carbonyl sulfide (COS), dimethyl sulfide (DMS), methyl mercaptan (MeSH), and carbon disulfide (CS2) were determined for several freshwater and coastal marine tundra habitats using a dynamic enclosure method and gas chromatography. In the freshwater tundra sites, highest emissions, with a mean of 6.0 nmol/m(sup -2)H(sup -1) (1.5-10) occurred in the water-saturated wet meadow areas inhabited by grasses, sedges, and Sphagnum mosses. In the drier upland tundra sites, highest fluxes occurred in areas inhabited by mixed vegetation and labrador tea at 3.0 nmol/m(sup -2)h(sup -1) (0-8.3) and lowest fluxes were from lichen-dominated areas at 0.9 nmol/m(sup -2)h(sup -1). Sulfur emissions from a lake surface were also low at 0.8 nmol/m(sup -2)h(sup -1). Of the compounds measured, DMS was the dominant gas emitted from all of these sites. Sulfure emissions from the marine sites were up to 20-fold greater than fluxes in the freshwater habitats and were also dominated by DMS. Emissions of DMS were highest from intertidal soils inhabited by Carex subspathacea (150-250 nmol/m(sup -2)h(sup -1)). This Carex sp. was grazed thoroughly by geese and DMS fluxes doubled when goose feces were left within the flux chamber. Emissions were much lower from other types of vegetation which were more spatially dominant. Sulfure emissions from tundra were among the lowest reported in the literature. When emission data were extrapolated to include all tundra globally, the global flux of biogenic sulfur from this biome is 2-3 x 10(exp 8) g/yr. This represents less than 0.001 percent of the estimated annual global flux (approximately 50 Tg) of biogenic sulfur and less than 0.01 percent of the estimated terrestrial flux. The low emissions are attributed to the low availability of sulfate, certain hydrological characteristics of tundra, and the tendency for tundra to accumulate organic matter.

  16. Emissions of biogenic sulfur gases from Alaskan tundra

    SciTech Connect

    Hines, M.E.; Morrison, M.C.

    1992-10-30

    Fluxes of the biogenic sulfur gases carbonyl sulfide (COS), dimethyl sulfide (DMS), methyl mercaptan (MeSH), and carbon disulfide (CS{sub 2}) were determined from several freshwater and coastal marine tundra habitats using a dynamic enclosure method and gas chromatography. In the freshwater tundra sites, highest emissions, with a mean of 6.0 nmol m{sup {minus}2}h{sup {minus}1} (1.5-10) occurred in the water-saturated wet meadow areas inhabited by grasses, sedges, and Shpagnum mosses. In the drier upland tundra sites, highest fluxes occurred in areas inhabited by mixed vegetation and labrador tea at 3.0 nmol m{sup {minus}2}h{sup {minus}1} (0-8.3) and lowest fluxes were from lichen-dominated areas at 0.8 nmol m{sup {minus}2}h{sup {minus}1}. Sulfur emissions from a lake surface were also low at 0.8 nmol m{sup {minus}2}h{sup {minus}1}. Of the compounds measured, DMS was the dominant gas emitted from all of these sites. Sulfur emissions from the marine sites were up to 20-fold greater than fluxes in the freshwater habitats and were also dominated by DMS. Emissions of DMS were highest from intertidal soils inhabited by Carex subspathacea. This Carex sp. was grazed thoroughly by geese and DMS fluxes doubled when goose feces were left within the flux chamber. Emissions were much lower from other types of vegetation which were more spatially dominant. Sulfur emissions from tundra were among the lowest reported in the literature. When emission data were extrapolated to include all tundra globally, the global flux of biogenic sulfur from this biome is 2-3 x 10{sup 8} g yr{sup {minus}1}. This represents less than 0.001% of the estimated annual global flux of biogenic sulfur and <0.01% of the estimated terrestrial flux. The low emissions are attributed to the low availability of sulfate, certain hydrological characteristics of tundra, and the tendency for tundra to accumulate organic matter. 31 refs., 1 fig., 2 tabs.

  17. Long-term dynamical evolution of Tundra-type orbits

    NASA Astrophysics Data System (ADS)

    Zhang, Ming-Jiang; Zhao, Chang-Yin; Hou, Yong-Gang; Zhu, Ting-Lei; Wang, Hong-Bo; Sun, Rong-Yu; Zhang, Wei

    2017-01-01

    Tundra-type orbits are elliptical geosynchronous orbits located at the critical inclination. The long-term dynamical evolution of this type of special orbit is investigated in this paper. First, the effect of Earth's gravitational potential is examined. A simplified Hamiltonian of Tundra-type orbits subjected to Earth's gravitational potential is presented through a strict magnitude comparison of the involved terms. Based on this simplified Hamiltonian with two degrees of freedom, the equilibrium points of the orbits subjected to Earth's gravitational potential and their stabilities are discussed. This simplified Hamiltonian is then reduced to a one-degree-of-freedom system dominating the intermediate-period motion of the orbits approximately. In particular, the main characteristic parameters of the intermediate-period motion for nominal Tundra-type orbits and the corresponding specific results for three Sirius satellites in such orbits are presented. Second, the effect of lunisolar perturbations is examined. A magnitude comparison elementarily illustrates that the effect of tesseral harmonics of the Earth's gravitational potential on the long timespan evolution of Tundra-type orbits is negligible compared to that of lunisolar perturbations. A simplified dynamical model including lunisolar perturbations is then presented. Based on this simplified dynamical model, the influences of lunar precession, the initial longitude of the ascending node, the initial argument of perigee, and the initial epoch on the long-term dynamical evolution of the orbits are comparatively analyzed. Finally, numerical calculations with exact perturbation models are conducted to verify the theoretical analysis and to provide more information about the dynamical evolution of Tundra-type orbits.

  18. Effects of mat characteristics on plantar pressure patterns and perceived mat properties during landing in gymnastics.

    PubMed

    Pérez-Soriano, Pedro; Llana-Belloch, Salvador; Morey-Klapsing, Gaspar; Perez-Turpin, Jose Antonio; Cortell-Tormo, Juan Manuel; van den Tillaar, Roland

    2010-11-01

    Shock absorption and stability during landings is provided by both, gymnast ability and mat properties. The aims of this study were to determine the influence of different mat constructions on their energy absorption and stability capabilities, and to analyse how these properties affect gymnast's plantar pressures as well as subjective mat perception during landing. Six mats were tested using a standard mechanical drop test. In addition, plantar pressures and subjective perception during landing were obtained from 15 expert gymnasts. The different mats influenced plantar pressures and gymnasts' subjective perception during landing of gymnasts. Significant correlations between plantar pressures at the medial metatarsal and lateral metatarsal zones of the gymnasts' feet with the different shock absorption characteristics of the mats were found. However, subjective perception tests were not able to discriminate mat functionality between the six mats as no significant correlations between the mechanical mat properties with the subjective perception of these properties were found. This study demonstrated that plantar pressures are a useful tool for discriminating different landing mats. Using similar approaches, ideally including kinematics as well, could help us in our understanding about the influences of different mats upon gymnast-mat interaction.

  19. Canopy Spectral Imaging (NDVI) As A Proxy For Shrub Biomass And Ecosystem Carbon Fluxes Across Arctic Tundra Habitats

    NASA Astrophysics Data System (ADS)

    Flower, C. E.; Welker, J. M.; Gonzalez-Meler, M. A.

    2015-12-01

    There is widespread consensus that climate change is contributing to rapid vegetation shifts in the ecologically sensitive Arctic tundra. These tussock grass dominated systems are shifting to tussock/woody shrub communities leading to likely alterations in carbon (C) sequestration and ecosystem productivity, which in turn can manifest in "greening" and changes in normalized difference vegetation index values (NDVI). While the expansion of woody vegetation is well established, our understanding of the ecosystem dynamics associated with this new habitat remain largely unknown. To untangle how the Arctic tundra may be impacted by these vegetation shifts we paired vegetation measurements (i.e. shrub biomass, leaf area, and shrub canopy area) and ecosystem C fluxes (e.g. net ecosystem exchange, NEE, and ecosystem respiration) with ground-level measurements of NDVI. Measurements were conducted at the Toolik Field Station in dry heath and moist acidic tundra habitats which are two primary habitat types on the North Slope of Alaska. We found strong positive relationships between shrub leaf area and biomass as well as shrub canopy area and biomass, relationships that were corroborated with NDVI measurements. This lends support for the use of NDVI as a proxy measurement of leaf area and shrub biomass. Additionally, NDVI was negatively correlated with ecosystem respiration across habitats, with respiratory fluxes consistently higher in the moist acidic relative to the dry heath tundra. Finally, we observed a significant positive nonlinear relationship between NEE and NDVI (R2~0.8; P<0.01). Shrub removal revealed that NEE was strongly controlled by woody shrubs. The positive relationship between NDVI and NEE highlights the potential shifts in the C balance of the Arctic tundra associated with woody encroachment. This increased plant productivity may offset greenhouse gas losses from permafrost degradation contributing some resilience to this system otherwise considered a

  20. Nonwoven glass fiber mat reinforces polyurethane adhesive

    NASA Technical Reports Server (NTRS)

    Roseland, L. M.

    1967-01-01

    Nonwoven glass fiber mat reinforces the adhesive properties of a polyurethane adhesive that fastens hardware to exterior surfaces of aluminum tanks. The mat is embedded in the uncured adhesive. It ensures good control of the bond line and increases the peel strength.

  1. Flat laminated microbial mat communities

    NASA Astrophysics Data System (ADS)

    Franks, Jonathan; Stolz, John F.

    2009-10-01

    Flat laminated microbial mats are complex microbial ecosystems that inhabit a wide range of environments (e.g., caves, iron springs, thermal springs and pools, salt marshes, hypersaline ponds and lagoons, methane and petroleum seeps, sea mounts, deep sea vents, arctic dry valleys). Their community structure is defined by physical (e.g., light quantity and quality, temperature, density and pressure) and chemical (e.g., oxygen, oxidation/reduction potential, salinity, pH, available electron acceptors and donors, chemical species) parameters as well as species interactions. The main primary producers may be photoautotrophs (e.g., cyanobacteria, purple phototrophs, green phototrophs) or chemolithoautophs (e.g., colorless sulfur oxidizing bacteria). Anaerobic phototrophy may predominate in organic rich environments that support high rates of respiration. These communities are dynamic systems exhibiting both spatial and temporal heterogeneity. They are characterized by steep gradients with microenvironments on the submillimeter scale. Diel oscillations in the physical-chemical profile (e.g., oxygen, hydrogen sulfide, pH) and species distribution are typical for phototroph-dominated communities. Flat laminated microbial mats are often sites of robust biogeochemical cycling. In addition to well-established modes of metabolism for phototrophy (oxygenic and non-oxygenic), respiration (both aerobic and anaerobic), and fermentation, novel energetic pathways have been discovered (e.g., nitrate reduction couple to the oxidation of ammonia, sulfur, or arsenite). The application of culture-independent techniques (e.g., 16S rRNA clonal libraries, metagenomics), continue to expand our understanding of species composition and metabolic functions of these complex ecosystems.

  2. Investigation of VEGGIE Root Mat

    NASA Technical Reports Server (NTRS)

    Subbiah, Arun M.

    2013-01-01

    VEGGIE is a plant growth facility that utilizes the phenomenon of capillary action as its primary watering system. A cloth made of Meta Aramid fiber, known as Nomex is used to wick water up from a reservoir to the bottom of the plants roots. This root mat system is intended to be low maintenance with no moving parts and requires minimal crew interface time. Unfortunately, the water wicking rates are inconsistent throughout the plant life cycle, thus causing plants to die. Over-wicking of water occurs toward the beginning of the cycle, while under-wicking occurs toward the middle. This inconsistency of wicking has become a major issue, drastically inhibiting plant growth. The primary objective is to determine the root cause of the inconsistent wicking through experimental testing. Suspect causes for the capillary water column to break include: a vacuum effect due to a negative pressure gradient in the water reservoir, contamination of material due to minerals in water and back wash from plant fertilizer, induced air bubbles while using syringe refill method, and material limitations of Nomex's ability to absorb and retain water. Experimental testing will be conducted to systematically determine the cause of under and over-wicking. Pressure gages will be used to determine pressure drop during the course of the plant life cycle and during the water refill process. A debubbler device will be connected to a root mat in order to equalize pressure inside the reservoir. Moisture and evaporation tests will simultaneously be implemented to observe moisture content and wicking rates over the course of a plant cycle. Water retention tests will be performed using strips of Nomex to determine materials wicking rates, porosity, and absorptivity. Through these experimental tests, we will have a better understanding of material properties of Nomex, as well as determine the root cause of water column breakage. With consistent test results, a forward plan can be achieved to resolve

  3. Complex polar lipids of a hot spring cyanobacterial mat and its cultivated inhabitants

    NASA Technical Reports Server (NTRS)

    Ward, D. M.; Panke, S.; Kloppel, K. D.; Christ, R.; Fredrickson, H.

    1994-01-01

    The complex polar lipids of the hot spring cyanobacterial mat in the 50 to 55 degrees C region of Octopus Spring, Yellowstone National Park, and of thermophilic bacteria cultivated from this or similar habitats, were compared in an attempt to understand the microbial sources of the major lipid biomarkers in this community. Intact complex lipids were analyzed directly by fast atom bombardment mass spectrometry (FAB-MS), two-dimensional thin-layer chromatography (TLC), and combined TLC-FAB-MS. FAB-MS and TLC gave qualitatively similar results, suggesting that the mat contains major lipids most like those of the cyanobacterial isolate we studied, Synechococcus sp. strain Y-7c-s. These include monoglycosyl, diglycosyl, and sulfoquinosovyl diglycerides (MG, DG, and SQ, respectively) and phosphatidyl glycerol (PG). Though Chloroflexus aurantiacus also contains MG, DG, and PG, the fatty acid chain lengths of mat MGs, DGs, and PGs resemble more those of cyanobacterial than green nonsulfur bacterial lipids. FAB-MS spectra of the lipids of nonphototrophic bacterial isolates were distinctively different from those of the mat and phototrophic isolates. The lipids of these nonphototrophic isolates were not detected in the mat, but most could be detected when added to mat samples. The mat also contains major glycolipids and aminophospholipids of unknown structure and origin. FAB-MS and TLC did not always give quantitatively similar results. In particular, PG and SQ may give disproportionately high FAB-MS responses.

  4. The micromorphology of Younger Dryas-aged black mats from Nevada, Arizona, Texas and New Mexico

    NASA Astrophysics Data System (ADS)

    Harris-Parks, Erin

    2016-01-01

    Black mats are organic-rich sediments and soils that form in wet environments associated with spring discharge. Micromorphological and geochemical analyses of 25 black mats dating to the Younger Dryas Chronozone (12.9-11.7 ka) and early Holocene were conducted to determine their composition and depositional environment. Samples were collected from Arizona, New Mexico, Texas and Nevada. Micromorphological analyses were conducted on thin sections using polarized and blue fluorescent light. These analyses determined that black mats contain humic acids, fine (5-20 μm) plant fragments, diatoms, phytoliths, and gastropods. The dominant type of organic matter in black mats is derived from herbaceous plants, contradicting previous studies that supported algal or charcoal sources. Differences in the micromorphological characteristics of the samples revealed that black mats formed as three different types, organic horizons, moist soils and, ponded sediments, depending on their topographic position in relation to the water table. The microscopic evidence found in black mats supports the presence of widespread wet environments in Nevada and Arizona during the Younger Dryas Chronozone, clearly indicating a sustained period of greater effective moisture, optimal for spring discharge and black mat formation.

  5. Winter precipitation and snow accumulation drive the methane sink or source strength of Arctic tussock tundra.

    PubMed

    Blanc-Betes, Elena; Welker, Jeffrey M; Sturchio, Neil C; Chanton, Jeffrey P; Gonzalez-Meler, Miquel A

    2016-08-01

    Arctic winter precipitation is projected to increase with global warming, but some areas will experience decreases in snow accumulation. Although Arctic CH4 emissions may represent a significant climate forcing feedback, long-term impacts of changes in snow accumulation on CH4 fluxes remain uncertain. We measured ecosystem CH4 fluxes and soil CH4 and CO2 concentrations and (13) C composition to investigate the metabolic pathways and transport mechanisms driving moist acidic tundra CH4 flux over the growing season (Jun-Aug) after 18 years of experimental snow depth increases and decreases. Deeper snow increased soil wetness and warming, reducing soil %O2 levels and increasing thaw depth. Soil moisture, through changes in soil %O2 saturation, determined predominance of methanotrophy or methanogenesis, with soil temperature regulating the ecosystem CH4 sink or source strength. Reduced snow (RS) increased the fraction of oxidized CH4 (Fox) by 75-120% compared to Ambient, switching the system from a small source to a net CH4 sink (21 ± 2 and -31 ± 1 mg CH4  m(-2)  season(-1) at Ambient and RS). Deeper snow reduced Fox by 35-40% and 90-100% in medium- (MS) and high- (HS) snow additions relative to Ambient, contributing to increasing the CH4 source strength of moist acidic tundra (464 ± 15 and 3561 ± 97 mg CH4  m(-2)  season(-1) at MS and HS). Decreases in Fox with deeper snow were partly due to increases in plant-mediated CH4 transport associated with the expansion of tall graminoids. Deeper snow enhanced CH4 production within newly thawed soils, responding mainly to soil warming rather than to increases in acetate fermentation expected from thaw-induced increases in SOC availability. Our results suggest that increased winter precipitation will increase the CH4 source strength of Arctic tundra, but the resulting positive feedback on climate change will depend on the balance between areas with more or less snow accumulation than they are currently

  6. Diversification of Nitrogen Sources in Various Tundra Vegetation Types in the High Arctic.

    PubMed

    Skrzypek, Grzegorz; Wojtuń, Bronisław; Richter, Dorota; Jakubas, Dariusz; Wojczulanis-Jakubas, Katarzyna; Samecka-Cymerman, Aleksandra

    2015-01-01

    Low nitrogen availability in the high Arctic represents a major constraint for plant growth, which limits the tundra capacity for carbon retention and determines tundra vegetation types. The limited terrestrial nitrogen (N) pool in the tundra is augmented significantly by nesting seabirds, such as the planktivorous Little Auk (Alle alle). Therefore, N delivered by these birds may significantly influence the N cycling in the tundra locally and the carbon budget more globally. Moreover, should these birds experience substantial negative environmental pressure associated with climate change, this will adversely influence the tundra N-budget. Hence, assessment of bird-originated N-input to the tundra is important for understanding biological cycles in polar regions. This study analyzed the stable nitrogen composition of the three main N-sources in the High Arctic and in numerous plants that access different N-pools in ten tundra vegetation types in an experimental catchment in Hornsund (Svalbard). The percentage of the total tundra N-pool provided by birds, ranged from 0-21% in Patterned-ground tundra to 100% in Ornithocoprophilous tundra. The total N-pool utilized by tundra plants in the studied catchment was built in 36% by birds, 38% by atmospheric deposition, and 26% by atmospheric N2-fixation. The stable nitrogen isotope mixing mass balance, in contrast to direct methods that measure actual deposition, indicates the ratio between the actual N-loads acquired by plants from different N-sources. Our results enhance our understanding of the importance of different N-sources in the Arctic tundra and the used methodological approach can be applied elsewhere.

  7. Diversification of Nitrogen Sources in Various Tundra Vegetation Types in the High Arctic

    PubMed Central

    Skrzypek, Grzegorz; Wojtuń, Bronisław; Richter, Dorota; Jakubas, Dariusz; Wojczulanis-Jakubas, Katarzyna; Samecka-Cymerman, Aleksandra

    2015-01-01

    Low nitrogen availability in the high Arctic represents a major constraint for plant growth, which limits the tundra capacity for carbon retention and determines tundra vegetation types. The limited terrestrial nitrogen (N) pool in the tundra is augmented significantly by nesting seabirds, such as the planktivorous Little Auk (Alle alle). Therefore, N delivered by these birds may significantly influence the N cycling in the tundra locally and the carbon budget more globally. Moreover, should these birds experience substantial negative environmental pressure associated with climate change, this will adversely influence the tundra N-budget. Hence, assessment of bird-originated N-input to the tundra is important for understanding biological cycles in polar regions. This study analyzed the stable nitrogen composition of the three main N-sources in the High Arctic and in numerous plants that access different N-pools in ten tundra vegetation types in an experimental catchment in Hornsund (Svalbard). The percentage of the total tundra N-pool provided by birds, ranged from 0–21% in Patterned-ground tundra to 100% in Ornithocoprophilous tundra. The total N-pool utilized by tundra plants in the studied catchment was built in 36% by birds, 38% by atmospheric deposition, and 26% by atmospheric N2-fixation. The stable nitrogen isotope mixing mass balance, in contrast to direct methods that measure actual deposition, indicates the ratio between the actual N-loads acquired by plants from different N-sources. Our results enhance our understanding of the importance of different N-sources in the Arctic tundra and the used methodological approach can be applied elsewhere. PMID:26376204

  8. Analysis of state of vehicular scars on Arctic Tundra, Alaska

    NASA Technical Reports Server (NTRS)

    Lathram, E. H.

    1974-01-01

    Identification on ERTS images of severe vehicular scars in the northern Alaska tundra suggests that, if such scars are of an intensity or have spread to a dimension such that they can be resolved by ERTS sensors (20 meters), they can be identified and their state monitored by the use of ERTS images. Field review of the state of vehicular scars in the Umiat area indicates that all are revegetating at varying rates and are approaching a stable state.

  9. Cold season emissions dominate the Arctic tundra methane budget

    PubMed Central

    Zona, Donatella; Gioli, Beniamino; Lindaas, Jakob; Wofsy, Steven C.; Miller, Charles E.; Dinardo, Steven J.; Dengel, Sigrid; Sweeney, Colm; Karion, Anna; Chang, Rachel Y.-W.; Henderson, John M.; Murphy, Patrick C.; Goodrich, Jordan P.; Moreaux, Virginie; Liljedahl, Anna; Watts, Jennifer D.; Kimball, John S.; Lipson, David A.; Oechel, Walter C.

    2016-01-01

    Arctic terrestrial ecosystems are major global sources of methane (CH4); hence, it is important to understand the seasonal and climatic controls on CH4 emissions from these systems. Here, we report year-round CH4 emissions from Alaskan Arctic tundra eddy flux sites and regional fluxes derived from aircraft data. We find that emissions during the cold season (September to May) account for ≥50% of the annual CH4 flux, with the highest emissions from noninundated upland tundra. A major fraction of cold season emissions occur during the “zero curtain” period, when subsurface soil temperatures are poised near 0 °C. The zero curtain may persist longer than the growing season, and CH4 emissions are enhanced when the duration is extended by a deep thawed layer as can occur with thick snow cover. Regional scale fluxes of CH4 derived from aircraft data demonstrate the large spatial extent of late season CH4 emissions. Scaled to the circumpolar Arctic, cold season fluxes from tundra total 12 ± 5 (95% confidence interval) Tg CH4 y−1, ∼25% of global emissions from extratropical wetlands, or ∼6% of total global wetland methane emissions. The dominance of late-season emissions, sensitivity to soil environmental conditions, and importance of dry tundra are not currently simulated in most global climate models. Because Arctic warming disproportionally impacts the cold season, our results suggest that higher cold-season CH4 emissions will result from observed and predicted increases in snow thickness, active layer depth, and soil temperature, representing important positive feedbacks on climate warming. PMID:26699476

  10. Cold season emissions dominate the Arctic tundra methane budget

    NASA Astrophysics Data System (ADS)

    Zona, Donatella; Gioli, Beniamino; Commane, Róisín; Lindaas, Jakob; Wofsy, Steven C.; Miller, Charles E.; Dinardo, Steven J.; Dengel, Sigrid; Sweeney, Colm; Karion, Anna; Chang, Rachel Y.-W.; Henderson, John M.; Murphy, Patrick C.; Goodrich, Jordan P.; Moreaux, Virginie; Liljedahl, Anna; Watts, Jennifer D.; Kimball, John S.; Lipson, David A.; Oechel, Walter C.

    2016-01-01

    Arctic terrestrial ecosystems are major global sources of methane (CH4); hence, it is important to understand the seasonal and climatic controls on CH4 emissions from these systems. Here, we report year-round CH4 emissions from Alaskan Arctic tundra eddy flux sites and regional fluxes derived from aircraft data. We find that emissions during the cold season (September to May) account for ≥50% of the annual CH4 flux, with the highest emissions from noninundated upland tundra. A major fraction of cold season emissions occur during the "zero curtain" period, when subsurface soil temperatures are poised near 0 °C. The zero curtain may persist longer than the growing season, and CH4 emissions are enhanced when the duration is extended by a deep thawed layer as can occur with thick snow cover. Regional scale fluxes of CH4 derived from aircraft data demonstrate the large spatial extent of late season CH4 emissions. Scaled to the circumpolar Arctic, cold season fluxes from tundra total 12 ± 5 (95% confidence interval) Tg CH4 y-1, ∼25% of global emissions from extratropical wetlands, or ∼6% of total global wetland methane emissions. The dominance of late-season emissions, sensitivity to soil environmental conditions, and importance of dry tundra are not currently simulated in most global climate models. Because Arctic warming disproportionally impacts the cold season, our results suggest that higher cold-season CH4 emissions will result from observed and predicted increases in snow thickness, active layer depth, and soil temperature, representing important positive feedbacks on climate warming.

  11. The 1977 tundra fire at Kokolik River, Alaska

    NASA Technical Reports Server (NTRS)

    Hall, D.; Brown, J.; Johnson, L.

    1981-01-01

    During the summer of 1977, fire totaled 44 sq km of tundra vegetation according to measurements using LANDSAT imagery. Based on the experience gained from analysis of this fire using ground observations, satellite imagery, and topographic maps, it appears that natural drainages form effective fire breaks on the subdued relief of the Arctic coastal plain and northern foothills. It is confirmed that the intensity of the fire is related to vegetation type and to the moisture content of the organic rich soils.

  12. Cold season emissions dominate the Arctic tundra methane budget.

    PubMed

    Zona, Donatella; Gioli, Beniamino; Commane, Róisín; Lindaas, Jakob; Wofsy, Steven C; Miller, Charles E; Dinardo, Steven J; Dengel, Sigrid; Sweeney, Colm; Karion, Anna; Chang, Rachel Y-W; Henderson, John M; Murphy, Patrick C; Goodrich, Jordan P; Moreaux, Virginie; Liljedahl, Anna; Watts, Jennifer D; Kimball, John S; Lipson, David A; Oechel, Walter C

    2016-01-05

    Arctic terrestrial ecosystems are major global sources of methane (CH4); hence, it is important to understand the seasonal and climatic controls on CH4 emissions from these systems. Here, we report year-round CH4 emissions from Alaskan Arctic tundra eddy flux sites and regional fluxes derived from aircraft data. We find that emissions during the cold season (September to May) account for ≥ 50% of the annual CH4 flux, with the highest emissions from noninundated upland tundra. A major fraction of cold season emissions occur during the "zero curtain" period, when subsurface soil temperatures are poised near 0 °C. The zero curtain may persist longer than the growing season, and CH4 emissions are enhanced when the duration is extended by a deep thawed layer as can occur with thick snow cover. Regional scale fluxes of CH4 derived from aircraft data demonstrate the large spatial extent of late season CH4 emissions. Scaled to the circumpolar Arctic, cold season fluxes from tundra total 12 ± 5 (95% confidence interval) Tg CH4 y(-1), ∼ 25% of global emissions from extratropical wetlands, or ∼ 6% of total global wetland methane emissions. The dominance of late-season emissions, sensitivity to soil environmental conditions, and importance of dry tundra are not currently simulated in most global climate models. Because Arctic warming disproportionally impacts the cold season, our results suggest that higher cold-season CH4 emissions will result from observed and predicted increases in snow thickness, active layer depth, and soil temperature, representing important positive feedbacks on climate warming.

  13. Identification of unrecognized tundra fire events on the north slope of Alaska

    USGS Publications Warehouse

    Jones, Benjamin M.; Breen, Amy L.; Gaglioti, Benjamin V.; Mann, Daniel H.; Rocha, Adrian V.; Grosse, Guido; Arp, Christopher D.; Kunz, Michael L.; Walker, Donald A.

    2013-01-01

    Characteristics of the natural fire regime are poorly resolved in the Arctic, even though fire may play an important role cycling carbon stored in tundra vegetation and soils to the atmosphere. In the course of studying vegetation and permafrost-terrain characteristics along a chronosequence of tundra burn sites from AD 1977, 1993, and 2007 on the North Slope of Alaska, we discovered two large, previously unrecognized tundra fires. The Meade River fire burned an estimated 500 km2 and the Ketik River fire burned an estimated 1200 km2. Based on radiocarbon dating of charred twigs, analysis of historic aerial photography, and regional climate proxy data, these fires likely occurred between AD 1880 and 1920. Together, these events double the estimated burn area on the North Slope of Alaska over the last ~100 to 130 years. Assessment of vegetation succession along the century-scale chronosequence of tundra fire disturbances demonstrates for the first time on the North Slope of Alaska that tundra fires can facilitate the invasion of tundra by shrubs. Degradation of ice-rich permafrost was also evident at the fire sites and likely aided in the presumed changes of the tundra vegetation postfire. Other previously unrecognized tundra fire events likely exist in Alaska and other Arctic regions and identification of these sites is important for better understanding disturbance regimes and carbon cycling in Arctic tundra.

  14. Siberian tundra ecosystem vegetation and carbon stocks four decades after wildfire

    NASA Astrophysics Data System (ADS)

    Loranty, Michael M.; Natali, Susan M.; Berner, Logan T.; Goetz, Scott J.; Holmes, Robert M.; Davydov, Sergei P.; Zimov, Nikita S.; Zimov, Sergey A.

    2014-11-01

    Tundra ecosystem fire regimes are intensifying with important implications for regional and global carbon (C) and energy dynamics. Although a substantial portion of the tundra biome is located in Russia, the vast majority of accessible studies describe North American tundra fires. Here we use field observations and high-resolution satellite remote sensing observations to describe the effects of wildfire on ecosystem C pools and vegetation communities four decades after fire for a tundra ecosystem in northeastern Siberia. Our analyses reveal no differences between soil physical properties and C pools in burned and unburned tundra, which we attribute to low combustion of organic soil associated with low-severity fire. Field and remote sensing data show no differences in aboveground C pools and vegetation communities indicating recovery to prefire conditions. These results are comparable to observations of ecosystem recovery in North American tundra. An assessment of literature data indicate that the average annual area burned in Russian tundra is an order of magnitude larger than that of Alaskan tundra, highlighting a crucial need to assess Russian tundra fire regimes in order to understand the current and future role of the biome wide fire regime in regional and global C and energy dynamics.

  15. Emissions of biogenic sulfur gases from Alaskan tundra

    NASA Technical Reports Server (NTRS)

    Hines, Mark E.; Morrison, Michael C.

    1992-01-01

    Results of sulfur emission measurements made in freshwater and marine wetlands in Alaskan tundra during the Arctic Boundary Layer Expedition 2A (ABLE 3A) in July 1988 are presented. The data indicate that this type of tundra emits very small amounts of gaseous sulfur and, when extrapolated globally, accounts for a very small percentage of the global flux of biogenic sulfur to the atmosphere. Sulfur emissions from marine sites are up to 20-fold greater than fluxes from freshwater habitats and are dominated by dimethyl sulfide (DMS). Highest emissions, with a mean of 6.0 nmol/sq m/h, occurred in water-saturated wet meadow areas. In drier upland tundra sites, highest fluxes occurred in areas inhabited by mixed vegetation and labrador tea at 3.0 nmol/sq m/h and lowest fluxes were from lichen-dominated areas at 0.9 nmol/sq m/h. DMS was the dominant gas emitted from all these sites. Emissions of DMS were highest from intertidal soils inhabited by Carex subspathacea.

  16. How to preserve the tundra in a warming climate?

    NASA Astrophysics Data System (ADS)

    Käyhkö, Jukka

    2014-05-01

    The warming climate of the polar regions may change much of the current arctic-alpine tundra to forest or dense scrubland. This modification requires adaptation by traditional livelihoods such as reindeer herding, which relies on diverse, seasonal pasturelands. Vegetation change may also trigger positive warming feedbacks, where more abundant forest-scrub vegetation will decrease the global albedo. NCoE Tundra team investigates the complex climate-animal-plant interaction of the tundra ecosystem and aim to unravel the capability of herbivorous mammals to control the expansion of woody vegetation. Our interdisciplinary approach involves several work packages, whose results will be summarised in the presentation. In the ecological WPs, we study the dynamics of the natural food chains involving small herbivorous and the impacts of reindeer on the vegetation and the population dynamics of those arctic-alpine plants, which are most likely to become threatened in a warmer climate. Our study demonstrates the potential of a relatively sparse reindeer stocks (2-5 heads per km2) together with natural populations of arvicoline rodents to prevent the expansion of erect woody plants at the arctic-alpine timberline. In the climatic WPs we study the impact of grazing-dependent vegetation differences on the fraction of solar energy converted to heat. In the socio-economic WPs, we study the conditions for maintaining the economic and cultural viability of reindeer herding while managing the land use so that the arctic-alpine biota would be preserved.

  17. Anurans in a Subarctic Tundra Landscape Near Cape Churchill, Manitoba

    USGS Publications Warehouse

    Reiter, M.E.; Boal, C.W.; Andersen, D.E.

    2008-01-01

    Distribution, abundance, and habitat relationships of anurans inhabiting subarctic regions are poorly understood, and anuran monitoring protocols developed for temperate regions may not be applicable across large roadless areas of northern landscapes. In addition, arctic and subarctic regions of North America are predicted to experience changes in climate and, in some areas, are experiencing habitat alteration due to high rates of herbivory by breeding and migrating waterfowl. To better understand subarctic anuran abundance, distribution, and habitat associations, we conducted anuran calling surveys in the Cape Churchill region of Wapusk National Park, Manitoba, Canada, in 2004 and 2005. We conducted surveys along ~l-km transects distributed across three landscape types (coastal tundra, interior sedge meadow-tundra, and boreal forest-tundra interface) to estimate densities and probabilities of detection of Boreal Chorus Frogs (Pseudacris maculata) and Wood Frogs (Lithobates sylvaticus). We detected a Wood Frog or Boreal Chorus Frog on 22 (87%) of 26 transects surveyed, but probability of detection varied between years and species and among landscape types. Estimated densities of both species increased from the coastal zone inland toward the boreal forest edge. Our results suggest anurans occur across all three landscape types in our study area, but that species-specific spatial patterns exist in their abundances. Considerations for both spatial and temporal variation in abundance and detection probability need to be incorporated into surveys and monitoring programs for subarctic anurans.

  18. Temporal changes in soil bacterial diversity and humic substances degradation in subarctic tundra soil.

    PubMed

    Park, Ha Ju; Chae, Namyi; Sul, Woo Jun; Lee, Bang Yong; Lee, Yoo Kyung; Kim, Dockyu

    2015-04-01

    Humic substances (HS), primarily humic acids (HA) and fulvic acids (FA), are the largest constituent of soil organic matter. In microcosm systems with subarctic HS-rich tundra soil (site AK 1-75; approximately 5.6 °C during the thawing period) from Council, Alaska, the HA content significantly decreased to 48% after a 99-day incubation at 5 °C as part of a biologically mediated process. Accordingly, levels of FA, a putative byproduct of HA degradation, consistently increased to 172% during an identical incubation process. Culture-independent microbial community analysis showed that during the microcosm experiments, the relative abundance of phyla Proteobacteria (bacteria) and Euryarchaeota (archaea) largely increased, indicating their involvement in HS degradation. When the indigenous bacteria in AK 1-75 were enriched in an artificial mineral medium spiked with HA, the changes in relative abundance were most conspicuous in Proteobacteria (from 60.2 to 79.0%), specifically Betaproteobacteria-related bacteria. One hundred twenty-two HA-degrading bacterial strains, primarily from the genera Paenibacillus (phylum Firmicutes) and Pseudomonas (class Gammaproteobacteria), were cultivated from AK 1-75 and nearby sites. Through culture-dependent analysis with these bacterial isolates, we observed increasing HS-degradation rates in parallel with rising temperatures in a range of 0 °C to 20 °C, with the most notable increase occurring at 8 °C compared to 6 °C. Our results indicate that, although microbial-mediated HS degradation occurs at temperature as low as 5 °C in tundra ecosystems, increasing soil temperature caused by global climate change could enhance HS degradation rates. Extending the thawing period could also increase degradation activity, thereby directly affecting nearby microbial communities and rhizosphere environments.

  19. Effects of chronic warming and nutrient additions on ecosystem respiration and methane fluxes along a tundra moisture gradient

    SciTech Connect

    Nadelhoffer, K.; Murray, G.; Giblin, A.; Shaver, G.; Laundre, J.; Johnson, L.; Stanley, A. ); Schimel, J. )

    1994-06-01

    We measured ecosystem respiration (ER: or CO[sub 2] flux), methane (CH[sub 4]) fluxes and net ecosystem production (NEP) near Toolik Lake, Alaska to compare effects of temperature, moisture and nutrients on tundra C balances. We measured fluxes using closed chambers in control, warmed and fertilized plots in wet, moist and dry tundra. ER rankings of tundra types differed between years. In 1992 ER was [approximately]70 g C m[sup [minus]2]y[sup [minus]1] in wet and moist tundra and was 50% lower in dry tundra. In 1993 ER was >150 g C m[sup [minus]2]y[sup [minus]1] in moist tundra and [approximately]55 g C m[sup [minus]2]y[sup [minus]1] in wet and dry tundra. CH[sub 4] emissions ranged from 3.5 to 7 g C m[sup [minus]2]y[sup [minus]1] in wet and from 0.6 to 2.8 g C m[sup [minus]2]y[sup [minus]1] in moist tundra. Dry tundra consumed about 0.1 g CH[sub 4]-C m[sup [minus]2]y[sup [minus]1]. In wet tundra ER increased slightly with warming but dramatically with fertilization. Wet tundra NEP increased with fertilization but not with warming. CH[sub 4] emissions from wet tundra increased with warming but decreased with fertilization. Warming and fertilization increased ER but neither treatment affected NEP in moist tundra. CH[sub 4] emissions from moist tundra responded similarly but less dramatically to treatments than did wet tundra CH[sub 4] fluxes. Warming did not affect ER or NEP in dry tundra, fertilization increased both process. Consumption of CH[sub 4] in dry tundra increased with warming but decreased with fertilization.

  20. Lipid Biomarkers for a Hypersaline Microbial Mat Community

    NASA Technical Reports Server (NTRS)

    Jahnke, Linda; Orphan, Victoria; Embaye, Tsegereda; Turk, Kendra; Kubo, Mike; Summons, Roger

    2004-01-01

    The use of lipid biomarkers and their carbon isotopic compositions are valuable tools for establishing links to ancient microbial ecosystems. Various lipids associated with specific microbial groups can serve as biomarkers for establishing organism source and function in contemporary microbial ecosystems (membrane lipids), and by analogy, potential relevance to ancient organic-rich sedimentary rocks (geolipids). As witnessed by the stromatolite record, benthic microbial mats grew in shallow water lagoonal environments. Our recent work has focused on lipid biomarker analysis of a potential analogue for such ancient mats growing in a set of hypersaline evaporation ponds at Guerrero Negro, Baja California Sur, Mexico. The aerobic, surface layer of this mat (0 to 1 mm) contained a variety of ester-bound fatty acids (FA) representing a diverse bacterial population including cyanobacteria, sulphate reducers (SRB) and heterotrophs. Biomarkers for microeukaryotes detected in this layer included sterols, C-20 polyunsaturated FA and a highly branched isoprenoid, diagnostic for diatoms. Cyanobacteria were also indicated by the presence of a diagnostic set of mid-chain methylalkanes. C-28, to C-34 wax esters (WXE) present in relatively small amounts in the upper 3 mm of the mat are considered biomarkers for green non-sulphur bacteria. Ether-bound isoprenoids were also identified although in considerably lower abundance than ester-bound FA (approx. 1:l0). These complex ether lipids included archatol, hydroxyarchaeol and a C-40 tetraether, all in small amounts. After ether cleavage with boron tribromide, the major recovered isoprenyl was a C-30:1. This C(sub 30;1) yelded squalane after hydrogenation, a known geobiomarker for hypersaline environments in ancient oils and sediments. In this mat, it represents the dominant Archaeal population. The carbon isotopic composition of biomarker lipids were generally depleted relative to the bulk organic material (delta C-13 TOC -10%). Most

  1. Fermentation couples Chloroflexi and sulfate-reducing bacteria to Cyanobacteria in hypersaline microbial mats

    PubMed Central

    Lee, Jackson Z.; Burow, Luke C.; Woebken, Dagmar; Everroad, R. Craig; Kubo, Mike D.; Spormann, Alfred M.; Weber, Peter K.; Pett-Ridge, Jennifer; Bebout, Brad M.; Hoehler, Tori M.

    2013-01-01

    Past studies of hydrogen cycling in hypersaline microbial mats have shown an active nighttime cycle, with production largely from Cyanobacteria and consumption from sulfate-reducing bacteria (SRB). However, the mechanisms and magnitude of hydrogen cycling have not been extensively studied. Two mats types near Guerrero Negro, Mexico—permanently submerged Microcoleus microbial mat (GN-S), and intertidal Lyngbya microbial mat (GN-I)—were used in microcosm diel manipulation experiments with 3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU), molybdate, ammonium addition, and physical disruption to understand the processes responsible for hydrogen cycling between mat microbes. Across microcosms, H2 production occurred under dark anoxic conditions with simultaneous production of a suite of organic acids. H2 production was not significantly affected by inhibition of nitrogen fixation, but rather appears to result from constitutive fermentation of photosynthetic storage products by oxygenic phototrophs. Comparison to accumulated glycogen and to CO2 flux indicated that, in the GN-I mat, fermentation released almost all of the carbon fixed via photosynthesis during the preceding day, primarily as organic acids. Across mats, although oxygenic and anoxygenic phototrophs were detected, cyanobacterial [NiFe]-hydrogenase transcripts predominated. Molybdate inhibition experiments indicated that SRBs from a wide distribution of DsrA phylotypes were responsible for H2 consumption. Incubation with 13C-acetate and NanoSIMS (secondary ion mass-spectrometry) indicated higher uptake in both Chloroflexi and SRBs relative to other filamentous bacteria. These manipulations and diel incubations confirm that Cyanobacteria were the main fermenters in Guerrero Negro mats and that the net flux of nighttime fermentation byproducts (not only hydrogen) was largely regulated by the interplay between Cyanobacteria, SRBs, and Chloroflexi. PMID:24616716

  2. Chemical and spectroscopic analyses of organic matter transformation in warming tundra soils

    NASA Astrophysics Data System (ADS)

    Herndon, E.; Roy Chowdhury, T.; Mann, B. F.; Graham, D. E.; Bargar, J.; Gu, B.; Liang, L.

    2013-12-01

    Many tundra soils are currently major carbon sinks; however, an increase in temperature may shift these systems to C sources and create a positive feedback for warming. In order to predict future C release from tundra soils, it is necessary to quantify rates of SOM degradation and to identify the reactants and products of microbial decomposition reactions. In this study, multiple spectroscopic techniques are used to investigate SOM during laboratory incubations of tundra soils. We aim to characterize the chemical transformation of organic matter during decomposition as a function of temperature and geochemistry. Frozen soil cores were obtained from the Barrow Environmental Observatory (BEO) in northern Alaska as part of the Next Generation Ecosystem Experiment Arctic project. To investigate the influence of temperature on organic matter degradation and compositional changes, soil horizons from each core were homogenized and soil material was incubated at -2°C, +4°C, or +8°C. Samples were sacrificed periodically over 100 days, and chemical and physical extractions were used to separate SOM into operationally-defined pools, including light (density < 1.6 g cm-2) and mineral-bound, and water-, acid-, base-, and non-soluble fractions. A suite of wet-chemical and spectroscopic analyses was used to measure CO2 and CH4 formation and soil C compositional changes, including techniques such as Fourier transform infrared spectroscopy, high performance liquid chromatography (HPLC), high resolution mass spectrometry, and X-ray absorption spectroscopy. Detailed chemical and spectroscopic analyses reveal significant differences amongst extracts and with depth in the soil. In general, more organic C was extracted in the base than in the acid and water fractions, and mineral-bound organic C increased with depth. The water-soluble C fraction showed the lowest molar absorptivity of the three extracts and consisted of mostly lower-molecular weight organics. Acid-soluble C increased

  3. Distinct temperature sensitivity among taiga and tundra shrubs in Alaska

    NASA Astrophysics Data System (ADS)

    Andreu-Hayles, L.; Anchukaitis, K. J.; D'Arrigo, R.

    2014-12-01

    Shrub expansion into Arctic and alpine tundra ecosystems is well documented, mostly over the last 50 years, based on remote sensing data, aerial photography, and in-situ observations. Warming temperatures are considered the main driver of the observed change in shrub vegetation patterns. Here, we assess the relationship between temperatures and shrub growth from five populations of Salix spp. (willow) and Alnus spp. (alder) in Alaska growing within the tundra and the boreal forest (~taiga) using dendrochronological techniques. The three tundra shrub sites are located on the Dalton Highway north from Toolik Lake (~69ºN 148ºW), whereas the two taiga shrub sites are located closer to Fairbanks at the Twelve Mile Summit site (~65ºN 146ºW). Because shrub ages vary among the studied populations lead to different time spans for the ring-width chronologies generated, a common period with available satellite data spanning from 1982 to 2010 was selected for this study. All tundra shrub chronologies shared a strong positive response to summer temperatures despite growing in heterogeneous site conditions and belonging to different species. In contrast, in the taiga, summer temperatures enhance willow growth, whereas alder growth appears almost insensitive to temperature over the interval studied. Extending the analyses back in time, a very strong positive relationship was found between alder ring-width and June temperatures prior to 1970. This phenomenon, a weakening of the previously existing relationship between growth and temperatures, was also detected in white spruce (Picea glauca) growing at the same site, and it is known in the literature as the 'divergence problem'. Thus, at this taiga location, alder shrubs and trees seem to have similar growth patterns. Summer temperatures no longer seem to enhance taiga alder growth. Shrubs of different species exposed to the same climatic conditions can exhibit varied growth responses. The distinct temperature sensitivities

  4. Changing Seasonality of Tundra Vegetation and Associated Climatic Variables

    NASA Astrophysics Data System (ADS)

    Bhatt, U. S.; Walker, D. A.; Raynolds, M. K.; Bieniek, P.; Epstein, H. E.; Comiso, J. C.; Pinzon, J.; Tucker, C. J.; Steele, M.; Ermold, W. S.; Zhang, J.

    2014-12-01

    This study documents changes in the seasonality of tundra vegetation productivity and its associated climate variables using long-term data sets. An overall increase of Pan-Arctic tundra greenness potential corresponds to increased land surface temperatures and declining sea ice concentrations. While sea ice has continued to decline, summer land surface temperature and vegetation productivity increases have stalled during the last decade in parts of the Arctic. To understand the processes behind these features we investigate additional climate parameters. This study employs remotely sensed weekly 25-km sea ice concentration, weekly surface temperature, and bi-weekly NDVI from 1982 to 2013. Maximum NDVI (MaxNDVI, Maximum Normalized Difference Vegetation Index), Time Integrated NDVI (TI-NDVI), Summer Warmth Index (SWI, sum of degree months above freezing during May-August), ocean heat content (PIOMAS, model incorporating ocean data assimilation), and snow water equivalent (GlobSnow, assimilated snow data set) are explored. We analyzed the data for the full period (1982-2013) and for two sub-periods (1982-1998 and 1999-2013), which were chosen based on the declining Pan-Arctic SWI since 1998. MaxNDVI has increased from 1982-2013 over most of the Arctic but has declined from 1999 to 2013 over western Eurasia, northern Canada, and southwest Alaska. TI-NDVI has trends that are similar to those for MaxNDVI for the full period but displays widespread declines over the 1999-2013 period. Therefore, as the MaxNDVI has continued to increase overall for the Arctic, TI-NDVI has been declining since 1999. SWI has large relative increases over the 1982-2013 period in eastern Canada and Greenland and strong declines in western Eurasia and southern Canadian tundra. Weekly Pan-Arctic tundra land surface temperatures warmed throughout the summer during the 1982-1998 period but display midsummer declines from 1999-2013. Weekly snow water equivalent over Arctic tundra has declined over

  5. Cyanobacterial mats: Microanalysis of community metabolism

    NASA Technical Reports Server (NTRS)

    Cohen, Y.; Bermudes, D.; Fischer, U.; Haddad, R.; Prufert, L.; Scheulderman-Suylen, T.; Shaw, T.

    1985-01-01

    The microbial communities in two sites were studied using several approaches: (1) light microscopy; (2) the measurement of microprofiles of oxygen and sulfide at the surface of the microbial mat; (3) the study of diurnal variation of oxygen and sulfides; (4) in situ measurement of photosynthesis and sulfate reduction and study of the coupling of these two processes; (5) measurement of glutathione in the upper layers of the microbial mat as a possible oxygen quencher; (6) measurement of reduced iron as a possible intermediate electron donor along the established redoxcline in the mats; (7) measurement of dissolved phosphate as an indicator of processes of break down of organic matter in these systems; and (8) measurement of carbon dioxide in the interstitial water and its delta C-13 in an attempt to understand the flow of CO2 through the systems. Microbial processes of primary production and initial degradation at the most active zone of the microbial mat were analyzed.

  6. Lipid biomarkers, pigments and cyanobacterial diversity of microbial mats across intertidal flats of the arid coast of the Arabian Gulf (Abu Dhabi, UAE).

    PubMed

    Abed, Raeid M M; Kohls, Katharina; Schoon, Raphaela; Scherf, Ann-Kathrin; Schacht, Marion; Palinska, Katarzyna A; Al-Hassani, Huda; Hamza, Waleed; Rullkötter, Jürgen; Golubic, Stjepko

    2008-09-01

    Variations in morphology, fatty acids, pigments and cyanobacterial community composition were studied in microbial mats across intertidal flats of the arid Arabian Gulf coast. These mats experience combined extreme conditions of salinity, temperature, UV radiation and desiccation depending on their tidal position. Different mat forms were observed depending on the topology of the coast and location. The mats contained 63 fatty acids in different proportions. The increased amounts of unsaturated fatty acids (12-39%) and the trans/cis ratio (0.6-1.6%) of the cyanobacterial fatty acid n-18:1omega9 in the higher tidal mats suggested an adaptation of the mat microorganisms to environmental stress. Chlorophyll a concentrations suggested lower cyanobacterial abundance in the higher than in the lower intertidal mats. Scytonemin concentrations were dependent on the increase in solar irradiation, salinity and desiccation. The mats showed richness in cyanobacterial species, with Microcoleus chthonoplastes and Lyngbya aestuarii morphotypes as the dominant cyanobacteria. Denaturing gradient gel electrophoresis patterns suggested shifts in the cyanobacterial community dependent on drainage efficiency and salinity from lower to higher tidal zones. We conclude that the topology of the coast and the variable extreme environmental conditions across the tidal flat determine the distribution of microbial mats as well as the presence or absence of different microorganisms.

  7. Nonwoven filtration mat production by electrospinning method

    NASA Astrophysics Data System (ADS)

    Lackowski, M.; Krupa, A.; Jaworek, A.

    2011-06-01

    The filtration of nanoparticles and submicron particles is an important problem in industry and health protection. One of the methods which can be used to solve this problem is to use nonwoven nanofibrous filters. The process of producing filtration mats of different thickness by electrospinning is presented in the paper. The experimental results on filtration properties of nanofibrous filter mat, including the efficiency of removal of cigarette smoke particles from a gas are also presented.

  8. Alaska North Slope Tundra Travel Model and Validation Study

    SciTech Connect

    Harry R. Bader; Jacynthe Guimond

    2006-03-01

    The Alaska Department of Natural Resources (DNR), Division of Mining, Land, and Water manages cross-country travel, typically associated with hydrocarbon exploration and development, on Alaska's arctic North Slope. This project is intended to provide natural resource managers with objective, quantitative data to assist decision making regarding opening of the tundra to cross-country travel. DNR designed standardized, controlled field trials, with baseline data, to investigate the relationships present between winter exploration vehicle treatments and the independent variables of ground hardness, snow depth, and snow slab thickness, as they relate to the dependent variables of active layer depth, soil moisture, and photosynthetically active radiation (a proxy for plant disturbance). Changes in the dependent variables were used as indicators of tundra disturbance. Two main tundra community types were studied: Coastal Plain (wet graminoid/moist sedge shrub) and Foothills (tussock). DNR constructed four models to address physical soil properties: two models for each main community type, one predicting change in depth of active layer and a second predicting change in soil moisture. DNR also investigated the limited potential management utility in using soil temperature, the amount of photosynthetically active radiation (PAR) absorbed by plants, and changes in microphotography as tools for the identification of disturbance in the field. DNR operated under the assumption that changes in the abiotic factors of active layer depth and soil moisture drive alteration in tundra vegetation structure and composition. Statistically significant differences in depth of active layer, soil moisture at a 15 cm depth, soil temperature at a 15 cm depth, and the absorption of photosynthetically active radiation were found among treatment cells and among treatment types. The models were unable to thoroughly investigate the interacting role between snow depth and disturbance due to a lack

  9. Feedbacks between tall shrubland development and active layer temperatures in northwest Siberian arctic tundra

    NASA Astrophysics Data System (ADS)

    Epstein, H. E.; Frost, G. V.; Walker, D. A.; Matyshak, G.

    2013-12-01

    Permafrost soils are a globally significant carbon store, but changes in permafrost thermal regime observed in recent decades across much of the Arctic suggest that permafrost carbon balance is likely to change with continued climate warming. Critical to changes in permafrost carbon balance in a warmer world, however, are feedbacks between changes in the composition and density of surface vegetation, and the thermal state of permafrost. Shrub expansion has been widely observed in the northwest Siberian Low Arctic, but the magnitude and direction of shrub-induced impacts to permafrost temperature and stability remain poorly understood. Here we evaluate changes to active layer properties and thermal regime that occur during tall shrubland development (shrubs > 1.5 m height) within a northwest Siberian landscape dominated by well-developed, small-scale patterned ground features (e.g., non-sorted circles). We measured the annual time-series of soil temperature at 5 cm and 20 cm depth, and the structural attributes of vegetation at patterned-ground microsites across four stages of tall shrubland development: low-growing tundra lacking erect shrubs, newly-developed shrublands, mature shrublands, and paludified shrublands. Mean summer soil temperatures declined with increasing shrub cover and moss thickness, but winter soil temperatures increased with shrub development. Shrubland development strongly attenuated cryoturbation, promoting the establishment of complete vegetation cover and the development of a continuous organic mat. Increased vegetation cover, in turn, led to further reduced cryoturbation and an aggrading permafrost table. These observations indicate that tall shrub expansion that is now occurring in patterned-ground landscapes of the northwest Siberian Arctic may buffer permafrost from atmospheric warming, and increase carbon storage in these systems at least in the short term.

  10. Spatiotemporal patterns of tundra fires: late-Quaternary charcoal records from Alaska

    NASA Astrophysics Data System (ADS)

    Chipman, M. L.; Hudspith, V.; Higuera, P. E.; Duffy, P. A.; Kelly, R.; Oswald, W. W.; Hu, F. S.

    2015-07-01

    Anthropogenic climate change has altered many ecosystem processes in the Arctic tundra and may have resulted in unprecedented fire activity. Evaluating the significance of recent fires requires knowledge from the paleofire record because observational data in the Arctic span only several decades, much shorter than the natural fire rotation in Arctic tundra regions. Here we report results of charcoal analysis on lake sediments from four Alaskan lakes to infer the broad spatial and temporal patterns of tundra-fire occurrence over the past 35 000 years. Background charcoal accumulation rates are low in all records (range is 0-0.05 pieces cm-2 yr-1), suggesting minimal biomass burning across our study areas. Charcoal peak analysis reveals that the mean fire-return interval (FRI; years between consecutive fire events) ranged from ca. 1650 to 6050 years at our sites, and that the most recent fire events occurred from ca. 880 to 7030 years ago, except for the CE 2007 Anaktuvuk River Fire. These mean FRI estimates are longer than the fire rotation periods estimated for the past 63 years in the areas surrounding three of the four study lakes. This result suggests that the frequency of tundra burning was higher over the recent past compared to the late Quaternary in some tundra regions. However, the ranges of FRI estimates from our paleofire records overlap with the expected values based on fire-rotation-period estimates from the observational fire data, and the differences are statistically insignificant. Together with previous tundra-fire reconstructions, these data suggest that the rate of tundra burning was spatially variable and that fires were extremely rare in our study areas throughout the late Quaternary. Given the rarity of tundra burning over multiple millennia in our study areas and the pronounced effects of fire on tundra ecosystem processes such as carbon cycling, dramatic tundra ecosystem changes are expected if anthropogenic climate change leads to more

  11. Spatiotemporal patterns of tundra fires: late-Quaternary charcoal records from Alaska

    NASA Astrophysics Data System (ADS)

    Chipman, M. L.; Hudspith, V.; Higuera, P. E.; Duffy, P. A.; Kelly, R.; Oswald, W. W.; Hu, F. S.

    2015-02-01

    Anthropogenic climate change has altered many ecosystem processes in the Arctic tundra and may have resulted in unprecedented fire activity. Evaluating the significance of recent fires requires knowledge from the paleo-fire record because observational data in the Arctic span only several decades, much shorter than the natural fire rotation in Arctic tundra regions. Here we report results of charcoal analysis on lake sediments from four Alaskan lakes to infer the broad spatial and temporal patterns of tundra fire occurrence over the past 35 000 years. Background charcoal accumulation rates are low in all records (range = 0-0.05 pieces cm-2 year-1), suggesting minimal biomass burning across our study areas. Charcoal peak analysis reveals that the mean fire return interval (FRI; years between consecutive fire events) ranged from 1648 to 6045 years at our sites, and that the most recent fire events occurred from 882 to 7031 years ago, except for the CE 2007 Anaktuvuk River Fire. These mean FRI estimates are longer than the fire rotation periods estimated for the past 63 years in the areas surrounding three of the four study lakes. This result suggests that the frequency of tundra burning was higher over the recent past compared to the late Quaternary in some tundra regions. However, the ranges of FRI estimates from our paleo-fire records overlap with the expected values based on fire-rotation-period estimates from the observational fire data, and thus quantitative differences are not significant. Together with previous tundra-fire reconstructions, these data suggest that the rate of tundra burning was spatially variable and that fires were extremely rare in our study areas throughout the late Quaternary. Given the rarity of tundra burning over multiple millennia in our study areas and the pronounced effects of fire on tundra ecosystem processes such as carbon cycling, dramatic tundra ecosystem changes are expected if anthropogenic climate change leads to more frequent

  12. Exploring defocus matting: nonparametric acceleration, super-resolution, and off-center matting.

    PubMed

    Joshi, Neel; Matusik, Wojciech; Avidan, Shai; Pfister, Hanspeter; Freeman, William T

    2007-01-01

    Defocus matting is a fully automatic and passive method for pulling mattes from video captured with coaxial cameras that have different depths of field and planes of focus. Nonparametric sampling can accelerate the video-matting process from minutes to seconds per frame. In addition a super-resolution technique efficiently bridges the gap between mattes from high-resolution video cameras and those from low-resolution cameras. Off-center matting pulls mattes for an external high-resolution camera that doesn't share the same center of projection as the low-resolution cameras used to capture the defocus matting data.

  13. Eukaryotes in Arctic and Antarctic cyanobacterial mats.

    PubMed

    Jungblut, Anne D; Vincent, Warwick F; Lovejoy, Connie

    2012-11-01

    Cyanobacterial mats are commonly found in freshwater ecosystems throughout the polar regions. Most mats are multilayered three-dimensional structures with the filamentous cyanobacteria embedded in a gel-like matrix. Although early descriptions mentioned the presence of larger organisms including metazoans living in the mats, there have been few studies specifically focused on the microbial eukaryotes, which are often small cells with few morphological features suitable for identification by microscopy. Here, we applied 18S rRNA gene clone library analysis to identify eukaryotes in cyanobacterial mat communities from both the Antarctic and the extreme High Arctic. We identified 39 ribotypes at the level of 99% sequence similarity. These consisted of taxa within algal and other protist groups including Chlorophyceae, Prasinophyceae, Ulvophyceae, Trebouxiophyceae, Bacillariophyceae, Chrysophyceae, Ciliophora, and Cercozoa. Fungi were also recovered, as were 21 metazoan ribotypes. The eukaryotic taxa appeared habitat-specific with little overlap between lake, pond, and ice shelf communities. Some ribotypes were common to both Arctic and Antarctic mats, suggesting global dispersal of these taxa and similarity in the environmental filters acting on protist communities. Many of these eukaryotic taxa likely benefit from protected, nutrient-rich microhabitats within the cyanobacterial mat environment.

  14. Microbial Diversity and Lipid Abundance in Microbial Mats from a Sulfidic, Saline, Warm Spring in Utah, USA

    NASA Astrophysics Data System (ADS)

    Gong, J.; Edwardson, C.; Mackey, T. J.; Dzaugis, M.; Ibarra, Y.; Course 2012, G.; Frantz, C. M.; Osburn, M. R.; Hirst, M.; Williamson, C.; Hanselmann, K.; Caporaso, J.; Sessions, A. L.; Spear, J. R.

    2012-12-01

    The microbial diversity of Stinking Springs, a sulfidic, saline, warm spring northeast of the Great Salt Lake was investigated. The measured pH, temperature, salinity, and sulfide concentration along the flow path ranged from 6.64-7.77, 40-28° C, 2.9-2.2%, and 250 μM to negligible, respectively. Five sites were selected along the flow path and within each site microbial mats were dissected into depth profiles based on the color and texture of the mat layers. Genomic DNA was extracted from each layer, and the 16S rRNA gene was amplified and sequenced on the Roche 454 Titanium platform. Fatty acids were also extracted from the mat layers and analyzed by liquid chromatography and mass spectrometry. The mats at Stinking Springs were classified into roughly two morphologies with respect to their spatial distribution: loose, sometimes floating mats proximal to the spring source; and thicker, well-laminated mats distal to the spring source. Loosely-laminated mats were found in turbulent stream flow environments, whereas well-laminated mats were common in less turbulent sheet flows. Phototrophs, sulfur oxidizers, sulfate reducers, methanogens, other bacteria and archaea were identified by 16S rRNA gene sequences. Diatoms, identified by microscopy and lipid analysis were found to increase in abundance with distance from the source. Methanogens were generally more abundant in deeper mat laminae. Photoheterotrophs were found in all mat layers. Microbial diversity increased significantly with depth at most sites. In addition, two distinct microbial streamers were identified and characterized at the two fast flowing sites. These two streamer varieties were dominated by either cyanobacteria or flavobacteria. Overall, our genomic and lipid analysis suggest that the physical and chemical environment is more predictive of the community composition than mat morphology. Site Map

  15. Shrub encroachment in Arctic tundra: Betula nana effects on above- and belowground litter decomposition.

    PubMed

    McLaren, Jennie R; Buckeridge, Kate M; van de Weg, Martine J; Shaver, Gaius R; Schimel, Joshua P; Gough, Laura

    2017-03-06

    Rapid arctic vegetation change as a result of global warming includes an increase in the cover and biomass of deciduous shrubs. Increases in shrub abundance will result in a proportional increase of shrub litter in the litter community, potentially affecting carbon turnover rates in arctic ecosystems. We investigated the effects of leaf and root litter of a deciduous shrub, Betula nana, on decomposition, by examining species-specific decomposition patterns, as well as effects of Betula litter on the decomposition of other species. We conducted a 2-yr decomposition experiment in moist acidic tundra in northern Alaska, where we decomposed three tundra species (Vaccinium vitis-idaea, Rhododendron palustre, and Eriophorum vaginatum) alone and in combination with Betula litter. Decomposition patterns for leaf and root litter were determined using three different measures of decomposition (mass loss, respiration, extracellular enzyme activity). We report faster decomposition of Betula leaf litter compared to other species, with support for species differences coming from all three measures of decomposition. Mixing effects were less consistent among the measures, with negative mixing effects shown only for mass loss. In contrast, there were few species differences or mixing effects for root decomposition. Overall, we attribute longer-term litter mass loss patterns to patterns created by early decomposition processes in the first winter. We note numerous differences for species patterns between leaf and root decomposition, indicating that conclusions from leaf litter experiments should not be extrapolated to below-ground decomposition. The high decomposition rates of Betula leaf litter aboveground, and relatively similar decomposition rates of multiple species below, suggest a potential for increases in turnover in the fast-decomposing carbon pool of leaves and fine roots as the dominance of deciduous shrubs in the Arctic increases, but this outcome may be tempered by

  16. Increased wintertime CO2 loss as a result of sustained tundra warming

    NASA Astrophysics Data System (ADS)

    Webb, Elizabeth E.; Schuur, Edward A. G.; Natali, Susan M.; Oken, Kiva L.; Bracho, Rosvel; Krapek, John P.; Risk, David; Nickerson, Nick R.

    2016-02-01

    Permafrost soils currently store approximately 1672 Pg of carbon (C), but as high latitudes warm, this temperature-protected C reservoir will become vulnerable to higher rates of decomposition. In recent decades, air temperatures in the high latitudes have warmed more than any other region globally, particularly during the winter. Over the coming century, the arctic winter is also expected to experience the most warming of any region or season, yet it is notably understudied. Here we present nonsummer season (NSS) CO2 flux data from the Carbon in Permafrost Experimental Heating Research project, an ecosystem warming experiment of moist acidic tussock tundra in interior Alaska. Our goals were to quantify the relationship between environmental variables and winter CO2 production, account for subnivean photosynthesis and late fall plant C uptake in our estimate of NSS CO2 exchange, constrain NSS CO2 loss estimates using multiple methods of measuring winter CO2 flux, and quantify the effect of winter soil warming on total NSS CO2 balance. We measured CO2 flux using four methods: two chamber techniques (the snow pit method and one where a chamber is left under the snow for the entire season), eddy covariance, and soda lime adsorption, and found that NSS CO2 loss varied up to fourfold, depending on the method used. CO2 production was dependent on soil temperature and day of season but atmospheric pressure and air temperature were also important in explaining CO2 diffusion out of the soil. Warming stimulated both ecosystem respiration and productivity during the NSS and increased overall CO2 loss during this period by 14% (this effect varied by year, ranging from 7 to 24%). When combined with the summertime CO2 fluxes from the same site, our results suggest that this subarctic tundra ecosystem is shifting away from its historical function as a C sink to a C source.

  17. 50 CFR 20.107 - Seasons, limits, and shooting hours for tundra swans.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 9 2012-10-01 2012-10-01 false Seasons, limits, and shooting hours for tundra swans. 20.107 Section 20.107 Wildlife and Fisheries UNITED STATES FISH AND WILDLIFE SERVICE..., and Shooting Hours Schedules § 20.107 Seasons, limits, and shooting hours for tundra swans....

  18. 50 CFR 20.107 - Seasons, limits, and shooting hours for tundra swans.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 9 2013-10-01 2013-10-01 false Seasons, limits, and shooting hours for tundra swans. 20.107 Section 20.107 Wildlife and Fisheries UNITED STATES FISH AND WILDLIFE SERVICE..., and Shooting Hours Schedules § 20.107 Seasons, limits, and shooting hours for tundra swans....

  19. 50 CFR 20.107 - Seasons, limits, and shooting hours for tundra swans.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 9 2014-10-01 2014-10-01 false Seasons, limits, and shooting hours for tundra swans. 20.107 Section 20.107 Wildlife and Fisheries UNITED STATES FISH AND WILDLIFE SERVICE..., and Shooting Hours Schedules § 20.107 Seasons, limits, and shooting hours for tundra swans....

  20. 50 CFR 20.107 - Seasons, limits, and shooting hours for tundra swans.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 8 2011-10-01 2011-10-01 false Seasons, limits, and shooting hours for tundra swans. 20.107 Section 20.107 Wildlife and Fisheries UNITED STATES FISH AND WILDLIFE SERVICE..., and Shooting Hours Schedules § 20.107 Seasons, limits, and shooting hours for tundra swans....

  1. 50 CFR 20.107 - Seasons, limits, and shooting hours for tundra swans.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 6 2010-10-01 2010-10-01 false Seasons, limits, and shooting hours for tundra swans. 20.107 Section 20.107 Wildlife and Fisheries UNITED STATES FISH AND WILDLIFE SERVICE..., and Shooting Hours Schedules § 20.107 Seasons, limits, and shooting hours for tundra swans....

  2. Dynamics of Aboveground Phytomass of the Circumpolar Arctic Tundra During the Past Three Decades

    NASA Technical Reports Server (NTRS)

    Epstein, Howard E.; Raynolds, Martha K.; Walker, Donald A.; Bhatt, Uma S.; Tucker, Compton J.; Pinzon, Jorge E.

    2012-01-01

    Numerous studies have evaluated the dynamics of Arctic tundra vegetation throughout the past few decades, using remotely sensed proxies of vegetation, such as the normalized difference vegetation index (NDVI). While extremely useful, these coarse-scale satellite-derived measurements give us minimal information with regard to how these changes are being expressed on the ground, in terms of tundra structure and function. In this analysis, we used a strong regression model between NDVI and aboveground tundra phytomass, developed from extensive field-harvested measurements of vegetation biomass, to estimate the biomass dynamics of the circumpolar Arctic tundra over the period of continuous satellite records (1982-2010). We found that the southernmost tundra subzones (C-E) dominate the increases in biomass, ranging from 20 to 26%, although there was a high degree of heterogeneity across regions, floristic provinces, and vegetation types. The estimated increase in carbon of the aboveground live vegetation of 0.40 Pg C over the past three decades is substantial, although quite small relative to anthropogenic C emissions. However, a 19.8% average increase in aboveground biomass has major implications for nearly all aspects of tundra ecosystems including hydrology, active layer depths, permafrost regimes, wildlife and human use of Arctic landscapes. While spatially extensive on-the-ground measurements of tundra biomass were conducted in the development of this analysis, validation is still impossible without more repeated, long-term monitoring of Arctic tundra biomass in the field.

  3. Airborne Spectral Measurements of Surface-Atmosphere Anisotropy for Arctic Sea Ice and Tundra

    NASA Technical Reports Server (NTRS)

    Arnold, G. Thomas; Tsay, Si-Chee; King, Michael D.; Li, Jason Y.; Soulen, Peter F.

    1999-01-01

    Angular distributions of spectral reflectance for four common arctic surfaces: snow-covered sea ice, melt-season sea ice, snow-covered tundra, and tundra shortly after snowmelt were measured using an aircraft based, high angular resolution (1-degree) multispectral radiometer. Results indicate bidirectional reflectance is higher for snow-covered sea ice than melt-season sea ice at all wavelengths between 0.47 and 2.3 pm, with the difference increasing with wavelength. Bidirectional reflectance of snow-covered tundra is higher than for snow-free tundra for measurements less than 1.64 pm, with the difference decreasing with wavelength. Bidirectional reflectance patterns of all measured surfaces show maximum reflectance in the forward scattering direction of the principal plane, with identifiable specular reflection for the melt-season sea ice and snow-free tundra cases. The snow-free tundra had the most significant backscatter, and the melt-season sea ice the least. For sea ice, bidirectional reflectance changes due to snowmelt were more significant than differences among the different types of melt-season sea ice. Also the spectral-hemispherical (plane) albedo of each measured arctic surface was computed. Comparing measured nadir reflectance to albedo for sea ice and snow-covered tundra shows albedo underestimated 5-40%, with the largest bias at wavelengths beyond 1 pm. For snow-free tundra, nadir reflectance underestimates plane albedo by about 30-50%.

  4. High areal capacity Si/LiCoO2 batteries from electrospun composite fiber mats

    DOE PAGES

    Self, Ethan C.; Naguib, Michael Abdelmalak; Ruther, Rose E.; ...

    2017-03-09

    Freestanding nanofiber mat Li–ion battery anodes containing Si nanoparticles, carbon black, and poly(acrylic acid) (Si/C/PAA) are prepared using electrospinning. The mats are compacted to a high fiber volume fraction (≈0.85), and interfiber contacts are welded by exposing the mat to methanol vapor. A compacted+welded fiber mat anode containing 40 wt % Si exhibits high capacities of 1484 mA h g–1 (3500 mA h gmath formula ) at 0.1 C and 489 mA h g–1 at 1 C and good cycling stability (e.g., 73 % capacity retention over 50 cycles). Post-mortem analysis of the fiber mats shows that the overall electrodemore » structure is preserved during cycling. Whereas many nanostructured Si anodes are hindered by their low active material loadings and densities, thick, densely packed Si/C/PAA fiber mat anodes reported here have high areal and volumetric capacities (e.g., 4.5 mA h cm–2 and 750 mA h cm–3, respectively). A full cell containing an electrospun Si/C/PAA anode and electrospun LiCoO2-based cathode has a high specific energy density of 270 Wh kg–1. Here, the excellent performance of the electrospun Si/C/PAA fiber mat anodes is attributed to the: i) PAA binder, which interacts with the SiOx surface of Si nanoparticles and ii) high material loading, high fiber volume fraction, and welded interfiber contacts of the electrospun mats.« less

  5. High Areal Capacity Si/LiCoO2 Batteries from Electrospun Composite Fiber Mats.

    PubMed

    Self, Ethan C; Naguib, Michael; Ruther, Rose E; McRen, Emily C; Wycisk, Ryszard; Liu, Gao; Nanda, Jagjit; Pintauro, Peter N

    2017-03-09

    Freestanding nanofiber mat Li-ion battery anodes containing Si nanoparticles, carbon black, and poly(acrylic acid) (Si/C/PAA) are prepared using electrospinning. The mats are compacted to a high fiber volume fraction (≈0.85), and interfiber contacts are welded by exposing the mat to methanol vapor. A compacted+welded fiber mat anode containing 40 wt % Si exhibits high capacities of 1484 mA h g(-1) (3500 mA h g-1Si ) at 0.1 C and 489 mA h g(-1) at 1 C and good cycling stability (e.g., 73 % capacity retention over 50 cycles). Post-mortem analysis of the fiber mats shows that the overall electrode structure is preserved during cycling. Whereas many nanostructured Si anodes are hindered by their low active material loadings and densities, thick, densely packed Si/C/PAA fiber mat anodes reported here have high areal and volumetric capacities (e.g., 4.5 mA h cm(-2) and 750 mA h cm(-3) , respectively). A full cell containing an electrospun Si/C/PAA anode and electrospun LiCoO2 -based cathode has a high specific energy density of 270 Wh kg(-1) . The excellent performance of the electrospun Si/C/PAA fiber mat anodes is attributed to the: i) PAA binder, which interacts with the SiOx surface of Si nanoparticles and ii) high material loading, high fiber volume fraction, and welded interfiber contacts of the electrospun mats.

  6. Summertime CO2 fluxes and ecosystem respiration from marine animal colony tundra in maritime Antarctica

    NASA Astrophysics Data System (ADS)

    Zhu, Renbin; Bao, Tao; Wang, Qing; Xu, Hua; Liu, Yashu

    2014-12-01

    Net ecosystem CO2 exchange (NEE) and ecosystem respiration (ER) were investigated at penguin, seal and skua colony tundra and the adjacent animal-lacking tundra sites in maritime Antarctica. Net CO2 fluxes showed a large difference between marine animal colonies and animal-lacking tundra sites. The mean NEE from penguin, seal and skua colony tundra sites ranged from -37.2 to 5.2 mg CO2 m-2 h-1, whereas animal-lacking tundra sites experienced a larger net gain of CO2 with the mean flux range from -85.6 to -23.9 mg CO2 m-2 h-1. Ecosystem respiration rates at penguin colony tundra sites (mean 201.3 ± 31.4 mg CO2 m-2 h-1) were significantly higher (P < 0.01) than those at penguin-lacking tundra sites (64.0-87.1 mg CO2 m-2 h-1). The gross photosynthesis (Pg) showed a consistent trend to ER with the highest mean Pg (219.7 ± 34.5 mg CO2 m-2 h-1) at penguin colony tundra sites. When all the data were combined from different types of tundra ecosystems, summertime tundra NEE showed a weak or strong positive correlation with air temperature, 0-10 cm soil temperature or precipitation. The NEE from marine animal colony and animal-lacking tundra was significantly positively correlated (P < 0.001) with soil organic carbon (SOC), total nitrogen (TN) contents and C:N ratios. The ER showed a significant exponential correlation (P < 0.01) with mean 0-15 cm soil temperature, and much higher Q10 value (9.97) was obtained compared with other terrestrial ecosystems, indicating greater temperature sensitivity of tundra ecosystem respiration. Our results indicate that marine animals and the deposition of their excreta might have an important effect on tundra CO2 exchanges and ecosystem respiration, and current climate warming will further decrease tundra CO2 sink in maritime Antarctica.

  7. Identifying nitrogen limitations to organic sediments accumulation in various vegetation types of arctic tundra (Hornsund, Svalbard)

    NASA Astrophysics Data System (ADS)

    Skrzypek, G.; Wojtuń, B.; Hua, Q.; Richter, D.; Jakubas, D.; Wojczulanis-Jakubas, K.; Samecka-Cymerman, A.

    2015-12-01

    Arctic and subarctic regions play important roles in the global carbon balance. However, nitrogen (N) deficiency is a major constraint for organic carbon sequestration in the High Arctic. Hence, the identification of the relative contributions from different N-sources is critical for understanding the constraints that limit tundra growth. The stable nitrogen composition of the three main N-sources and numerous plants were analyzed in ten tundra types in the Fuglebekken catchment (Hornsund Fjord, Svalbard, 77°N 15°E). The percentage of the total tundra N-pool provided by seabirds' feces (colonially breeding, planktivorous Alle alle), ranged from 0-21% in Patterned-ground tundra to 100% in Ornithocoprophilous tundra. The total N-pool utilized by tundra plants in the studied catchment was built in 36% by birds, 38% by atmospheric deposition, and 26% by N2-fixation. The results clearly show that N-pool in the tundra is significantly supplemented by nesting seabirds. Thus, if they experienced substantial negative environmental pressure associated with climate change, it would adversely influence the tundra N-budget [1]. The growth rates and the sediment thickness (<15 cm) in different tundra types varied considerably but the tundra age was similar, <450 cal BP. The only exception was Ornithocoprophilous tundra with very diverse ages ranging from 235 to 2300 cal BP and thickness up to 110cm. The growth rates for this tundra (62 cm core, 18 AMS 14C dates) were high (1.5-3.0 mm/yr) between 1568 and 1804 AD and then substantially declined for the period between 1804 and 1929 AD (0.2 mm/yr). These findings deliver an additional argument, that the organic matter accumulation is driven not only directly by climatic conditions but also by birds' contribution to the tundra N-pool. [1] Skrzypek G, Wojtuń B, Richter D, Jakubas D, Wojczulanis-Jakubas K, Samecka-Cymerman A, 2015. Diversification of nitrogen sources in various tundra vegetation types in the high Arctic. PLoS ONE

  8. Tundra in the rain: differential vegetation responses to three years of experimentally doubled summer precipitation in Siberian shrub and Swedish bog tundra.

    PubMed

    Keuper, Frida; Parmentier, Frans-Jan W; Blok, Daan; van Bodegom, Peter M; Dorrepaal, Ellen; van Hal, Jurgen R; van Logtestijn, Richard S P; Aerts, Rien

    2012-01-01

    Precipitation amounts and patterns at high latitude sites have been predicted to change as a result of global climatic changes. We addressed vegetation responses to three years of experimentally increased summer precipitation in two previously unaddressed tundra types: Betula nana-dominated shrub tundra (northeast Siberia) and a dry Sphagnum fuscum-dominated bog (northern Sweden). Positive responses to approximately doubled ambient precipitation (an increase of 200 mm year(-1)) were observed at the Siberian site, for B. nana (30 % larger length increments), Salix pulchra (leaf size and length increments) and Arctagrostis latifolia (leaf size and specific leaf area), but none were observed at the Swedish site. Total biomass production did not increase at either of the study sites. This study corroborates studies in other tundra vegetation types and shows that despite regional differences at the plant level, total tundra plant productivity is, at least at the short or medium term, largely irresponsive to experimentally increased summer precipitation.

  9. Recovery of plant biomass and soil N cycling in Alaskan tundra following an unusual fire

    NASA Astrophysics Data System (ADS)

    Bret-Harte, M. S.; Mack, M. C.; Huebner, D. C.; Johnston, M.; Shaver, G. R.

    2012-12-01

    Climate warming is likely to increase the frequency of disturbances in the Arctic. The Anaktuvuk River fire of 2007 burned 1039 km2 of northern Alaskan tundra; this was unprecedented for this vegetation, which is clonal, slow-growing, and long-lived. We harvested plant biomass and soils from severely and moderately burned areas and controls in 2011 to assess recovery of plant productivity and soil N cycling four years after the fire. Biomass of vascular plants had recovered to nearly control levels in moderately burned areas, due primarily to resprouting by graminoids, particularly Eriophorum vaginatum. Graminoid biomass was actually greater in moderately burned tundra than in unburned tundra. Deciduous shrub and evergreen shrub biomass in moderately burned tundra was approximately half that seen in unburned tundra, but non-vascular plant biomass was much less, so that total aboveground biomass in moderately burned tundra had not returned to control levels. Severely burned tundra had less of all components of the community than in moderately burned tundra, except that there was higher biomass of non-vascular plants, due to colonization by fire-following liverworts and mosses. Productivity of vascular plants was similar in unburned and severely burned tundra plots, and higher in moderately burned plots, due in part to higher soil N availability. Recovery of plant biomass was largely due to resprouting of species that survived the fire, though numerous seedlings were seen. Biomass of vascular plants has recovered rapidly in the moderately burned sites, while severely burned sites and nonvascular plants are recovering more slowly, but the relative abundance of different species differs from unburned tundra. The relationship between spectral indices (NDVI, EVI-2) collected at the plot level and either biomass or NPP varied with burn category, which may complicate assessments of NPP by remote sensing following fire.

  10. RNA editing of mat-r transcripts in maize and soybean increases similarity of the encoded protein to fungal and bryophyte group II intron maturases: evidence that mat-r encodes a functional protein.

    PubMed Central

    Thomson, M C; Macfarlane, J L; Beagley, C T; Wolstenholme, D R

    1994-01-01

    We present evidence that transcripts of the mat-r (maturase-related) genes of maize and soybean contain 15 and 14 uridines (U), respectively, at positions occupied by cytosines (C) in the mat-r gene sequences. Eleven and twelve of these C-->U edits result in an amino acid replacement. Ten C-->U edits are at corresponding nucleotides in the maize and soybean transcripts and, except for a single silent edit, the remainder are at positions in one species that are Us in the other species. This results in an increase in amino acid sequence similarity of the maize and soybean MAT-R proteins. Further, of those amino acids in maize and soybean MAT-R proteins specified by edited codons, ten are conserved in the reverse transcriptase-associated and RNA splicing-associated sequences of the cox1-I2 and/or the cox1-I1 maturases of the fungus Saccharomyces cerevisiae and the bryophyte, Marchantia polymorpha, respectively. The implied strong selection for amino acid sequence conservation indicates that the MAT-R protein is functional. The possibility is discussed that initiation of translation of the mat-r transcripts is at a four nucleotide codon, ATAA or ATGA. PMID:7838731

  11. Revegetation of Alaskan Disturbed Sites by Native Tundra Species.

    DTIC Science & Technology

    1982-09-15

    Antibus, R.K., J.G. Croxdale, C.K. Miller, and A.E. Linkins. In Press. Ecyomycorrihizal fungi of Salix rotundifolia Trautv. III. Resynthesized mycorrihizal...typical of nutrient-poor sites (e.g. Empetrum nigrum), although there were species characteristic of fertile sites ( Salix pulchra), and infertile sites...tussock tundra, Eagle Creek, AK. Canadian Journal of Botany 58:1607-1611. McGraw, J.B., and G.R. Shaver. 1981. Seedling density and seedling survival

  12. Lipids of recently-deposited algal mats at Laguna Mormona, Baja California

    NASA Technical Reports Server (NTRS)

    Cardoso, J.; Brooks, P. W.; Eglinton, G.; Goodfellow, R.; Maxwell, J. R.; Philp, R. P.

    1976-01-01

    A preliminary survey of the lipid composition of the core of a recently deposited algal mat of a subtropical, hypersaline coastal pond is described. Two layers of the core were examined: the upper, 2-cm-thick layer, comprising the fresh algal mat of predominantly the blue-green species Microcoleus chthonoplastes, and the black anaerobic algal ooze at a depth of 10 cm. About 75% of the n-alkanes in the mat were accounted for by n-C17, with smaller amounts of higher homologues maximizing at n-C27. The ooze was characterized by a bimodal distribution with maxima at n-C17 and n-C27. The n-alkanoic acids distributions were similar to the corresponding n-alkane distributions. A marked decrease in the ratio of monounsaturated to saturated acids in the ooze relative to the mat was observed, which indicates a preferential removal of unsaturated components. Certain triterpenes of the hopane skeletal type were present in the mat and ooze. The presence of stanols and sterenes in the ooze with similar carbon number distributions suggests a relationship between them.

  13. Methane-Oxidizing Bacteria Shunt Carbon to Microbial Mats at a Marine Hydrocarbon Seep

    PubMed Central

    Paul, Blair G.; Ding, Haibing; Bagby, Sarah C.; Kellermann, Matthias Y.; Redmond, Molly C.; Andersen, Gary L.; Valentine, David L.

    2017-01-01

    The marine subsurface is a reservoir of the greenhouse gas methane. While microorganisms living in water column and seafloor ecosystems are known to be a major sink limiting net methane transport from the marine subsurface to the atmosphere, few studies have assessed the flow of methane-derived carbon through the benthic mat communities that line the seafloor on the continental shelf where methane is emitted. We analyzed the abundance and isotope composition of fatty acids in microbial mats grown in the shallow Coal Oil Point seep field off Santa Barbara, CA, USA, where seep gas is a mixture of methane and CO2. We further used stable isotope probing (SIP) to track methane incorporation into mat biomass. We found evidence that multiple allochthonous substrates supported the rich growth of these mats, with notable contributions from bacterial methanotrophs and sulfur-oxidizers as well as eukaryotic phototrophs. Fatty acids characteristic of methanotrophs were shown to be abundant and 13C-enriched in SIP samples, and DNA-SIP identified members of the methanotrophic family Methylococcaceae as major 13CH4 consumers. Members of Sulfuricurvaceae, Sulfurospirillaceae, and Sulfurovumaceae are implicated in fixation of seep CO2. The mats’ autotrophs support a diverse assemblage of co-occurring bacteria and protozoa, with Methylophaga as key consumers of methane-derived organic matter. This study identifies the taxa contributing to the flow of seep-derived carbon through microbial mat biomass, revealing the bacterial and eukaryotic diversity of these remarkable ecosystems. PMID:28289403

  14. Cold- and Growing-Season Microbial Substrate Use in Arctic Tundra Soil

    NASA Astrophysics Data System (ADS)

    Schimel, J.; McMahon, S.

    2006-12-01

    Microbial communities will play a critical role in determining arctic ecosystem response to warming due to global climate change since decomposition, which is responsible for both CO2 evolution and plant nutrient availability, is a microbially-mediated process. Microorganisms living in tundra soil have access to two broad categories of carbon compounds via decomposition: complex polymers such as cellulose, lignin, protein and soil organic matter, and simple monomers such as glucose, phenolics and amino acids. Thermodynamically, labile substrates are easier to degrade because the activation energy of the reaction is lower than for more recalcitrant polymers. Thus, metabolic processes involving simple compounds are more likely under frozen conditions during the cold season. To test this theory, we incubated soils collected at Toolik Lake, Alaska before and after snowmelt and freeze-up with a variety of 13C-labelled substrates to track microbial carbon use during cold- and growing-season conditions. Surprisingly, tussock soils respired more protein-derived carbon under frozen pre-thaw conditions than late growing-season conditions. Organic shrub soils respired more glutamic acid-derived carbon under all conditions. Since nitrogen is more abundant in shrub than tussock soils, microbes in the shrub soil can afford to respire glutamic acid as an energy source rather than incorporate it into microbial biomass as a nitrogen source. This study indicates that winter substrate use may not follow predictions made strictly on a thermodynamic basis and hints at the complex nature of cold-tolerant microorganisms.

  15. Light-stress avoidance mechanisms in a Sphagnum-dominated wet coastal Arctic tundra ecosystem in Alaska.

    PubMed

    Zona, D; Oechel, Walter C; Richards, James H; Hastings, Steven; Kopetz, Irene; Ikawa, Hiroki; Oberbauer, Steven

    2011-03-01

    The Arctic experiences a high-radiation environment in the summer with 24-hour daylight for more than two months. Damage to plants and ecosystem metabolism can be muted by overcast conditions common in much of the Arctic. However, with climate change, extreme dry years and clearer skies could lead to the risk of increased photoxidation and photoinhibition in Arctic primary producers. Mosses, which often exceed the NPP of vascular plants in Arctic areas, are often understudied. As a result, the effect of specific environmental factors, including light, on these growth forms is poorly understood. Here, we investigated net ecosystem exchange (NEE) at the ecosystem scale, net Sphagnum CO2 exchange (NSE), and photoinhibition to better understand the impact of light on carbon exchange from a moss-dominated coastal tundra ecosystem during the summer season 2006. Sphagnum photosynthesis showed photoinhibition early in the season coupled with low ecosystem NEE. However, later in the season, Sphagnum maintained a significant CO2 uptake, probably for the development of subsurface moss layers protected from strong radiation. We suggest that the compact canopy structure of Sphagnum reduces light penetration to the subsurface layers of the moss mat and thereby protects the active photosynthetic tissues from damage. This stress avoidance mechanism allowed Sphagnum to constitute a significant percentage (up to 60%) of the ecosystem net daytime CO2 uptake at the end of the growing season despite the high levels of radiation experienced.

  16. Full-glacial upland tundra vegetation preserved under tephra in the Beringia National Park, Seward Peninsula, Alaska

    NASA Astrophysics Data System (ADS)

    Goetcheus, Victoria G.; Birks, Hilary H.

    2001-01-01

    The nature of the full-glacial vegetation of Beringia has been the subject of a great deal of investigation and debate. Here we present a reconstruction of an intact example of the full-glacial upland vegetation of part of the northern Seward Peninsula at one point in time. The area was blanketed by more than 1 m of tephra ca. 18,000 14C BP (ca. 21,500 cal. BP), and the former land-surface was preserved in the permafrost. The discovery of the land-surface provides a unique opportunity to study a fossil ecosystem preserved in situ. Macrofossils were used to reconstruct the vegetation growing at several sites on the buried land-surface. The macrofossil assemblages indicate a vegetation characterized by graminoids and forbs, with the occasional occurrence of Salix arctica. The vegetation was dominated by Kobresia myosuroides, other sedges ( Carex), and grasses, with a fine-scale mosaic related to snow accumulation and moisture availability. Overall, the vegetation was a closed, dry, herb-rich tundra-grassland with a continuous moss layer, growing on calcareous soil that was continuously supplied with loess. Nutrient renewal by loess deposition was probably responsible for the relatively fertile vegetation, and the occurrence of a continuous mat of acrocarpous mosses. Good physiognomic analogues can be suggested, but no exact modern vegetational analogues have been found, probably because the full-glacial environment and climate with loess deposition do not occur today.

  17. Reactive composite compositions and mat barriers

    SciTech Connect

    Langton, Christine A.; Narasimhan, Rajendran; Karraker, David G.

    2001-01-01

    A hazardous material storage area has a reactive multi-layer composite mat which lines an opening into which a reactive backfill and hazardous material are placed. A water-inhibiting cap may cover the hazardous material storage area. The reactive multi-layer composite mat has a backing onto which is placed an active layer which will neutralize or stabilize hazardous waste and a fronting layer so that the active layer is between the fronting and backing layers. The reactive backfill has a reactive agent which can stabilize or neutralize hazardous material and inhibit the movement of the hazardous material through the hazardous material storage area.

  18. Nitrogen cycle in microbial mats: completely unknown?

    NASA Astrophysics Data System (ADS)

    Coban, O.; Bebout, B.

    2015-12-01

    Microbial mats are thought to have originated around 3.7 billion years ago, most likely in the areas around submarine hydrothermal vents, which supplied a source of energy in the form of reduced chemical species from the Earth's interior. Active hydrothermal vents are also believed to exist on Jupiter's moon Europa, Saturn's moon Enceladus, and on Mars, earlier in that planet's history. Microbial mats have been an important force in the maintenance of Earth's ecosystems and the first photosynthesis was also originated there. Microbial mats are believed to exhibit most, if not all, biogeochemical processes that exist in aquatic ecosystems, due to the presence of different physiological groups of microorganisms therein. While most microbially mediated biogeochemical transformations have been shown to occur within microbial mats, the nitrogen cycle in the microbial mats has received very little study in spite of the fact that nitrogen usually limits growth in marine environments. We will present the first results in the determination of a complete nitrogen budget for a photosynthetic microbial mat. Both in situ sources and sinks of nitrogen in photosynthetic microbial mats are being measured using stable isotope techniques. Our work has a particular focus on recently described, but poorly understood, processes, e.g., anammox and dissimilatory nitrate reduction, and an emphasis on understanding the role that nitrogen cycling may play in generating biogenic nitrogen isotopic signatures and biomarker molecules. Measurements of environmental controls on nitrogen cycling should offer insight into the nature of co-evolution of these microbial communities and their planets of origin. Identifying the spatial (microscale) as well as temporal (diel and seasonal) distribution of nitrogen transformations, e.g., rates of nitrification and denitrification, within mats, particularly with respect to the distribution of photosynthetically-produced oxygen, is anticipated. The results

  19. Recovering glycoside hydrolase genes from active tundra cellulolytic bacteria.

    PubMed

    Pinnell, Lee J; Dunford, Eric; Ronan, Patrick; Hausner, Martina; Neufeld, Josh D

    2014-07-01

    Bacteria responsible for cellulose hydrolysis in situ are poorly understood, largely because of the relatively recent development of cultivation-independent methods for their detection and characterization. This study combined DNA stable-isotope probing (DNA-SIP) and metagenomics for identifying active bacterial communities that assimilated carbon from glucose and cellulose in Arctic tundra microcosms. Following DNA-SIP, bacterial fingerprint analysis of gradient fractions confirmed isotopic enrichment. Sequenced fingerprint bands and clone library analysis of 16S rRNA genes identified active bacterial taxa associated with cellulose-associated labelled DNA, including Bacteroidetes (Sphingobacteriales), Betaproteobacteria (Burkholderiales), Alphaproteobacteria (Caulobacteraceae), and Chloroflexi (Anaerolineaceae). We also compared glycoside hydrolase metagenomic profiles from bulk soil and heavy DNA recovered from DNA-SIP incubations. Active populations consuming [(13)C]glucose and [(13)C]cellulose were distinct, based on ordinations of light and heavy DNA. Metagenomic analysis demonstrated a ∼3-fold increase in the relative abundance of glycoside hydrolases in DNA-SIP libraries over bulk-soil libraries. The data also indicate that multiple displacement amplification introduced bias into the resulting metagenomic analysis. This research identified DNA-SIP incubation conditions for glucose and cellulose that were suitable for Arctic tundra soil and confirmed that DNA-SIP enrichment can increase target gene frequencies in metagenomic libraries.

  20. Climate sensitivity of shrub growth across the tundra biome

    NASA Astrophysics Data System (ADS)

    Myers-Smith, Isla H.; Elmendorf, Sarah C.; Beck, Pieter S. A.; Wilmking, Martin; Hallinger, Martin; Blok, Daan; Tape, Ken D.; Rayback, Shelly A.; Macias-Fauria, Marc; Forbes, Bruce C.; Speed, James D. M.; Boulanger-Lapointe, Noémie; Rixen, Christian; Lévesque, Esther; Schmidt, Niels Martin; Baittinger, Claudia; Trant, Andrew J.; Hermanutz, Luise; Collier, Laura Siegwart; Dawes, Melissa A.; Lantz, Trevor C.; Weijers, Stef; Jørgensen, Rasmus Halfdan; Buchwal, Agata; Buras, Allan; Naito, Adam T.; Ravolainen, Virve; Schaepman-Strub, Gabriela; Wheeler, Julia A.; Wipf, Sonja; Guay, Kevin C.; Hik, David S.; Vellend, Mark

    2015-09-01

    Rapid climate warming in the tundra biome has been linked to increasing shrub dominance. Shrub expansion can modify climate by altering surface albedo, energy and water balance, and permafrost, yet the drivers of shrub growth remain poorly understood. Dendroecological data consisting of multi-decadal time series of annual shrub growth provide an underused resource to explore climate-growth relationships. Here, we analyse circumpolar data from 37 Arctic and alpine sites in 9 countries, including 25 species, and ~42,000 annual growth records from 1,821 individuals. Our analyses demonstrate that the sensitivity of shrub growth to climate was: (1) heterogeneous, with European sites showing greater summer temperature sensitivity than North American sites, and (2) higher at sites with greater soil moisture and for taller shrubs (for example, alders and willows) growing at their northern or upper elevational range edges. Across latitude, climate sensitivity of growth was greatest at the boundary between the Low and High Arctic, where permafrost is thawing and most of the global permafrost soil carbon pool is stored. The observed variation in climate-shrub growth relationships should be incorporated into Earth system models to improve future projections of climate change impacts across the tundra biome.

  1. Permafrost degradation stimulates carbon loss from experimentally warmed tundra.

    PubMed

    Natali, Susan M; Schuur, Edward A G; Webb, Elizabeth E; Pries, Caitlin E Hicks; Crummer, Kathryn G

    2014-03-01

    A large pool of organic carbon (C) has been accumulating in the Arctic for thousands of years because cold and waterlogged conditions have protected soil organic material from microbial decomposition. As the climate warms this vast and frozen C pool is at risk of being thawed, decomposed, and released to the atmosphere as greenhouse gasses. At the same time, some C losses may be offset by warming-mediated increases in plant productivity. Plant and microbial responses to warming ultimately determine net C exchange from ecosystems, but the timing and magnitude of these responses remain uncertain. Here we show that experimental warming and permafrost (ground that remains below 0 degrees C for two or more consecutive years) degradation led to a two-fold increase in net ecosystem C uptake during the growing season. However, warming also enhanced winter respiration, which entirely offset growing-season C gains. Winter C losses may be even higher in response to actual climate warming than to our experimental manipulations, and, in that scenario, could be expected to more than double overall net C losses from tundra to the atmosphere. Our results highlight the importance of winter processes in determining whether tundra acts as a C source or sink, and demonstrate the potential magnitude of C release from the permafrost zone that might be expected in a warmer climate.

  2. Power Plants Likely Covered by the Mercury and Air Toxics Standards (MATS)

    EPA Pesticide Factsheets

    The U.S. Environmental Protection Agency (EPA) has proposed Mercury and Air Toxics Standards (MATS) for power plants to limit mercury, acid gases and other toxic pollution from power plants. Using Google Earth, this page locates power plants in your state.

  3. Frequent fires in ancient shrub tundra: implications of paleorecords for arctic environmental change.

    PubMed

    Higuera, Philip E; Brubaker, Linda B; Anderson, Patricia M; Brown, Thomas A; Kennedy, Alison T; Hu, Feng Sheng

    2008-03-05

    Understanding feedbacks between terrestrial and atmospheric systems is vital for predicting the consequences of global change, particularly in the rapidly changing Arctic. Fire is a key process in this context, but the consequences of altered fire regimes in tundra ecosystems are rarely considered, largely because tundra fires occur infrequently on the modern landscape. We present paleoecological data that indicate frequent tundra fires in northcentral Alaska between 14,000 and 10,000 years ago. Charcoal and pollen from lake sediments reveal that ancient birch-dominated shrub tundra burned as often as modern boreal forests in the region, every 144 years on average (+/- 90 s.d.; n = 44). Although paleoclimate interpretations and data from modern tundra fires suggest that increased burning was aided by low effective moisture, vegetation cover clearly played a critical role in facilitating the paleofires by creating an abundance of fine fuels. These records suggest that greater fire activity will likely accompany temperature-related increases in shrub-dominated tundra predicted for the 21(st) century and beyond. Increased tundra burning will have broad impacts on physical and biological systems as well as on land-atmosphere interactions in the Arctic, including the potential to release stored organic carbon to the atmosphere.

  4. Nitrous oxide emissions from tundra soil and snowpack in the maritime Antarctic.

    PubMed

    Zhu, Renbin; Sun, Liguang; Ding, Weixin

    2005-06-01

    The nitrous oxide emissions were measured at three tundra sites and one snowpack on the Fildes Peninsula in the maritime Antarctic in the summertime of 2002. The average fluxes at two normal tundra sites were 1.1+/-2.2 and 0.6+/-1.7 microg N2O m(-2)h(-1), respectively. The average flux from tundra soil site with penguin dropping addition was 3.7+/-2.0 microg N2O m(-2)h(-1), 3-6 times those from the normal tundra soils, suggesting that the deposition of fresh droppings enhanced N2O emissions during penguin breeding period. The summer precipitation had an important effect on N2O emissions; the flux decreased when heavy precipitation occurred. The diurnal cycle of the N2O fluxes from Antarctic tundra soils was not obtained due to local fluky weather conditions. The N2O fluxes through four snowpack sites were obtained by the vertical N2O concentration gradient and their average fluxes were 0.94, 1.36, 0.81 and 0.85 microg N2O m(-2)h(-1), respectively. The tundra soils under snowpack emitted N2O in the maritime Antarctic and increased local atmospheric N2O concentrations; therefore these fluxes could constitute an important part of the annual N2O budget for Antarctic tundra ecosystem.

  5. Methane fluxes from tundra soils and snowpack in the maritime Antarctic.

    PubMed

    Zhu, Renbin; Sun, Liguang

    2005-06-01

    Methane fluxes were measured from three exposed tundra sites and four snowpack sites on the Fildes Peninsula in the maritime Antarctic in the summertime of 2002. The average fluxes at two normal tundra sites were -15.3 microgm(-2)h(-1) and -14.3 microgm(-2)h(-1), respectively. The fluxes from tundra site with fresh penguin dropping addition showed positive values with the average of 36.1 microgm(-2)h(-1), suggesting that the deposition of fresh droppings greatly enhanced CH4 emissions from the poor Antarctic tundra during penguin breeding periods. The summertime variation in CH4 flux was correlated with surface ground temperature and the precipitation. The correlation between the flux and PT0, which is the product of the precipitation and surface ground temperature, was quite strong. The diurnal cycle of CH4 flux from the tundra soils was not obtained due to local fluky weather conditions. The fluxes through four snowpack sites were also obtained by the vertical CH4 concentration gradient and their average fluxes were -46.5 microgm(-2)h(-1), -28.2 microgm(-2)h(-1), -46.4 microgm(-2)h(-1) and -17.9 microgm(-2)h(-1), respectively, indicating that tundra soils under snowpack also consume atmospheric CH4 in the maritime Antarctic; therefore these fluxes could constitute an important part of the annual CH4 budget for Antarctic tundra ecosystem.

  6. Can antibrowsing defense regulate the spread of woody vegetation in arctic tundra?

    USGS Publications Warehouse

    Bryant, John P.; Joly, Kyle; Chapin, F. Stuart; DeAngelis, Donald L.; Kielland, Knut

    2014-01-01

    Global climate warming is projected to promote the increase of woody plants, especially shrubs, in arctic tundra. Many factors may affect the extent of this increase, including browsing by mammals. We hypothesize that across the Arctic the effect of browsing will vary because of regional variation in antibrowsing chemical defense. Using birch (Betula) as a case study, we propose that browsing is unlikely to retard birch expansion in the region extending eastward from the Lena River in central Siberia across Beringia and the continental tundra of central and eastern Canada where the more effectively defended resin birches predominate. Browsing is more likely to retard birch expansion in tundra west of the Lena to Fennoscandia, Iceland, Greenland and South Baffin Island where the less effectively defended non-resin birches predominate. Evidence from the literature supports this hypothesis. We further suggest that the effect of warming on the supply of plant-available nitrogen will not significantly change either this pan-Arctic pattern of variation in antibrowsing defense or the resultant effect that browsing has on birch expansion in tundra. However, within central and east Beringia warming-caused increases in plant-available nitrogen combined with wildfire could initiate amplifying feedback loops that could accelerate shrubification of tundra by the more effectively defended resin birches. This accelerated shrubification of tundra by resin birch, if extensive, could reduce the food supply of caribou causing population declines. We conclude with a brief discussion of modeling methods that show promise in projecting invasion of tundra by woody plants.

  7. Frequent Fires in Ancient Shrub Tundra: Implications of Paleorecords for Arctic Environmental Change

    PubMed Central

    Higuera, Philip E.; Brubaker, Linda B.; Anderson, Patricia M.; Brown, Thomas A.; Kennedy, Alison T.; Hu, Feng Sheng

    2008-01-01

    Understanding feedbacks between terrestrial and atmospheric systems is vital for predicting the consequences of global change, particularly in the rapidly changing Arctic. Fire is a key process in this context, but the consequences of altered fire regimes in tundra ecosystems are rarely considered, largely because tundra fires occur infrequently on the modern landscape. We present paleoecological data that indicate frequent tundra fires in northcentral Alaska between 14,000 and 10,000 years ago. Charcoal and pollen from lake sediments reveal that ancient birch-dominated shrub tundra burned as often as modern boreal forests in the region, every 144 years on average (+/− 90 s.d.; n = 44). Although paleoclimate interpretations and data from modern tundra fires suggest that increased burning was aided by low effective moisture, vegetation cover clearly played a critical role in facilitating the paleofires by creating an abundance of fine fuels. These records suggest that greater fire activity will likely accompany temperature-related increases in shrub-dominated tundra predicted for the 21st century and beyond. Increased tundra burning will have broad impacts on physical and biological systems as well as on land-atmosphere interactions in the Arctic, including the potential to release stored organic carbon to the atmosphere. PMID:18320025

  8. The calcium carbonate saturation state in cyanobacterial mats throughout Earth’s history

    NASA Astrophysics Data System (ADS)

    Aloisi, Giovanni

    2008-12-01

    Through early lithification, cyanobacterial mats produced vast amounts of CaCO 3 on Precambrian carbonate platforms (before 540 Myr ago). The superposition of lithified cyanobacterial mats forms internally laminated, macroscopic structures known as stromatolites. Similar structures can be important constituents of Phanerozoic carbonate platforms (540 Myr to present). Early lithification in modern marine cyanobacterial mats is thought to be driven by a metabolically-induced increase of the CaCO 3 saturation state ( Ω) in the mat. However, it is uncertain which microbial processes produce the Ω increase and to which extent similar Ω shifts were possible in Precambrian oceans whose chemistry differed from that of the modern ocean. I developed a numerical model that calculates Ω in cyanobacterial mats and used it to tackle these questions. The model is first applied to simulate Ω in modern calcifying cyanobacterial mats forming at Highborne Cay (Bahamas); it shows that while cyanobacterial photosynthesis increases Ω considerably, sulphate reduction has a small and opposite effect on mat Ω because it is coupled to H 2S oxidation with O 2 which produces acidity. Numerical experiments show that the magnitude of the Ω increase is proportional to DIC in DIC-limited waters (DIC < 3-10 mM), is proportional to pH when ambient water DIC is not limiting and always proportional to the concentration of Ca 2+ in ambient waters. With oceanic Ca 2+ concentrations greater than a few millimolar, an appreciable increase in Ω occurs in mats under a wide range of environmental conditions, including those supposed to exist in the oceans of the past 2.8 Gyr. The likely lithological expression is the formation of the microsparitic stromatolite microtexture—indicative of CaCO 3 precipitation within the mats under the control of microbial activity—which is found in carbonate rocks spanning from the Precambrian to recent. The model highlights the potential for an increase in the

  9. Effect of Salinity on the Stable Carbon Isotopic Composition of Microbial Mats and Associated Lipid Biomarkers

    NASA Astrophysics Data System (ADS)

    Jahnke, L. L.; Parenteau, M. N.; Kubo, M. D.; Des Marais, D. J.

    2014-12-01

    Modern microbial mats are commonly used as analogs for understanding early ecosystem evolution. A primary feature of benthic ecosystems is the fixation of CO2 in the photic zone and transfer and/or mineralization of organic carbon through a diverse tropic structure. Generally, the resulting δ13C values for organic matter relative to DIC is small which indicates that these mats are CO2-limited. Microcoleus mat flux measurements indicate that small amounts of CO2 fixed during the day are lost to the overlying water at night as C13-enriched DIC (Des Marais and Canfield 1994). This loss results in depletion in mat organic matter and is thought to occur as a result of remineralized DIC fixation by chemo- and/or photoautotrophs. We have examined the fate of fixed carbon in hypersaline mats by analysis of the stable C-isotopes of bulk organic carbon and lipid compounds in a laminated-Microcoleus mat (90 ‰, pH 8.6) and in a gypsum-endoevaporitic, Halothece mat (163‰, pH 7.4). In the surface photic zone of Microcoleus mat, the δ13C TOC was -10.0 ‰ with membrane fatty acids (i-15, n-16, n-18, cy-19) ranging from -17.2 to -18.0‰. Cyanobacterial alkanes were similarly depleted (n-17 = -19.5‰). Eurkaryotic sterols and bacterial hopanoids were somewhat enriched with δ13C values ~-15‰. For Microcoleus mat, little variation occurred over 70 mm of core depth. The TOC and FA values for surface, endoevaporitic Halothece mat were generally similar to those of Microcoleus. However, below the surface gypsum crust, discrimination increased. Mass balance calculations for surface FA = -18.5‰ while the FA from layers below the crust = -25.2‰. The δ13C values for cyanobacterial alkanes (~-20‰) were similar from all layers while hopanoids from below crust were slightly depleted relative to those from surface. An apparent increased discrimination during fixation of remineralized DIC presumably by anoxygenic phototrophs present below the surface gypsum crust (Jahnke et al

  10. Succession Stages of Tundra Plant Communities Following Wildfire Disturbance in Arctic Alaska

    NASA Astrophysics Data System (ADS)

    Breen, A. L.; Hollingsworth, T. N.; Mack, M. C.; Jones, B. M.

    2015-12-01

    Rapid climate change is affecting climate-sensitive disturbance regimes throughout the world. In particular, the impacts of climate change on Arctic disturbance regimes are poorly understood because landscape-scale disturbances are infrequent or occur in remote localities. Wildfire in Arctic Alaska is presently limited by ignition source and favorable burn weather. With rapid climate change, a lengthening growing season, and subsequent increase in plant biomass and productivity, wildfire frequency and annual area burned in tundra ecosystems is expected to increase over the next century. Yet, post-fire tundra vegetation succession is inadequately characterized except at a few point locations. We identify succession stages of tussock tundra communities following wildfire using a chronosequence of 65 relevés in 10 tundra fire scars (1971-2011) and nearby unburned tundra from sites on the Seward Peninsula and northern foothills of the Brooks Range. We used the Braun-Blanquét approach to classify plant communities, and applied nonmetric multidimentional scaling (NMDS) to identify ecological gradients underlying community differentiation. The ordination revealed a clear differentiation between unburned and burned tundra communities. Ecological gradients, reflected by ordination axes, correspond to fire history (e.g., time since last fire, number of times burned, burn severity) and a complex productivity gradient. Post-fire species richness is less than unburned tundra; primarily reflected as a decrease in lichen species and turnover of bryophyte species immediately post-fire. Species richness of grasses increases post-fire and is greatest in communities that burned more than once in the past 30 years. Shrub cover and total aboveground biomass are greatest in repeat burn sites. We review and discuss our results focusing on the implications of a changing tundra fire regime, its effect on vegetation succession trajectories, and subsequent rates of carbon sequestration and

  11. How will Shrub Expansion Impact Soil Carbon Sequestration in Arctic Tundra?

    NASA Astrophysics Data System (ADS)

    Czimczik, C. I.; Holden, S. R.; He, Y.; Randerson, J. T.

    2015-12-01

    Multiple lines of evidence suggest that plant productivity, and especially shrub abundance, is increasing in the Arctic in response to climate change. This greening is substantiated by increases in the Normalized Difference Vegetation Index, repeat photography and field observations. The implications of a greener Arctic on carbon sequestration by tundra ecosystems remain poorly understood. Here, we explore existing datasets of plant productivity and soil carbon stocks to quantify how greening, and in particular an expansion of woody shrubs, may translate to the sequestration of carbon in arctic soils. As an estimate of carbon storage in arctic tundra soils, we used the Northern Circumpolar Soil Carbon Database v2. As estimates of tundra type and productivity, we used the Circumpolar Arctic Vegetation map as well as the MODIS and Landsat Vegetation Continuous Fields, and MODIS GPP/NPP (MOD17) products. Preliminary findings suggest that in graminoid tundra and erect-shrub tundra higher shrub abundance is associated with greater soil carbon stocks. However, this relationship between shrub abundance and soil carbon is not apparent in prostrate-shrub tundra, or when comparing across graminoid tundra, erect-shrub tundra and prostrate-shrub tundra. Uncertainties originate from the extreme spatial (vertical and horizontal) heterogeneity of organic matter distribution in cryoturbated soils, the fact that (some) permafrost carbon stocks, e.g. yedoma, reflect previous rather than current vegetative cover, and small sample sizes, esp. in the High Arctic. Using Vegetation Continuous Fields and MODIS GPP/NPP (MOD17), we develop quantitative trajectories of soil carbon storage as a function of shrub cover and plant productivity in the Arctic (>60°N). We then compare our greening-derived carbon sequestration estimates to projected losses of carbon from thawing permafrost. Our findings will reduce uncertainties in the magnitude and timing of the carbon-climate feedback from the

  12. Mycorrhizal fungi supply nitrogen to host plants in Arctic tundra and boreal forests: 15N is the key signal.

    PubMed

    Hobbie, John E; Hobbie, Erik A; Drossman, Howard; Conte, Maureen; Weber, J C; Shamhart, Julee; Weinrobe, Melissa

    2009-01-01

    Symbiotic fungi's role in providing nitrogen to host plants is well-studied in tundra at Toolik Lake, Alaska, but little-studied in the adjoining boreal forest ecosystem. Along a 570 km north-south transect from the Yukon River to the North Slope of Alaska, the 15N content was strongly reduced in ectomycorrhizal and ericoid mycorrhizal plants including Betula, Salix, Picea mariana (P. Mill.) B.S.P., Picea glauca Moench (Voss), and ericaceous plants. Compared with the 15N content of soil, the foliage of nonmycorrhizal plants (Carex and Eriophorum) was unchanged, whereas content of the ectomycorrhizal fungi was very much higher (e.g., Boletaceae, Leccinum and Cortinarius). It is hypothesized that similar processes operate in tundra and boreal forest, both nitrogen-limited ecosystems: (i) mycorrhizal fungi break down soil polymers and take up amino acids or other nitrogen compounds; (ii) mycorrhizal fungi fractionate against 15N during production of transfer compounds; (iii) host plants are accordingly depleted in 15N; and (iv) mycorrhizal fungi are enriched in 15N. Increased N availability for plant roots or decreased light availability to understory plants may have decreased N allocation to mycorrhizal partners and increased delta15N by 3-4 parts per million for southern populations of Vaccinium vitis-idaea L. and Salix. Fungal biomass, measured as ergosterol, correlated strongly with soil organic matter and attained amounts similar to those in temperate forest soils.

  13. The Tundra is a Net Source of CO2 Measured by Autochambers and Eddy Covariance Techniques During Five Years in a Site With Permafrost Thawing.

    NASA Astrophysics Data System (ADS)

    Celis, G.; Mauritz, M.; Bracho, R. G.; Salmon, V. G.; Webb, E.; Hutchings, J. A.; Natali, S.; Crummer, K. G.; Schuur, E.; Schaedel, C.

    2015-12-01

    Current and future warming of high latitude tundra ecosystems will play an important role in climate change through feedbacks to the global carbon (C) cycle. Long-term observational and experimental studies are pivotal for detecting and understanding changes in the coming decades. Yet studies of the C feedbacks from observational studies and manipulative experiments made on tundra plant communities often have significantly different conclusions with regards to impacts of warming on the ecosystem. Comparing results from these two study types, however, often involves integrating CO2 flux measurements that were collected on different spatial scales using a variety of methods. The process of data assimilation for landscape level analysis is often complicated by the fact that many projects only utilize one method for measuring CO2 fluxes at a given site. This study compares five years of C dynamics in a moist acidic tundra from control plots in a manipulative warming experiment (CiPEHR - plot-scale) and landscape-level natural permafrost thaw gradient (Gradient - Eddy covariance) observations all within a 1km distance from each other. We found net ecosystem exchange (NEE) to be an annual net source of carbon using both methods (Gradient 12.3 - 125.6 g CO2-C m-2 and CiPEHR warming manipulation 80.2 - 175.8 g CO2-C m-2). The differences between sites were biggest in the first three years of observation, and can be explained by lower growing season gross primary production (GPP - first three years) from the manipulation (CiPEHR), and lower ecosystem respiration (Reco) from CiPEHR in the first year only. Suppressed GPP and Reco could be from the impact of experimental setup (chamber soil collars - root damage), which lowered the plant community's capacity to fix C, but recovered within three years. This warrants caution of making generalization of short-term experiments in the tundra and more research is needed evaluating coupling of belowground and aboveground C dynamics.

  14. Hydrogen production in photosynthetic microbial mats in the Elkhorn Slough estuary, Monterey Bay

    PubMed Central

    Burow, Luke C; Woebken, Dagmar; Bebout, Brad M; McMurdie, Paul J; Singer, Steven W; Pett-Ridge, Jennifer; Prufert-Bebout, Leslie; Spormann, Alfred M; Weber, Peter K; Hoehler, Tori M

    2012-01-01

    Hydrogen (H2) release from photosynthetic microbial mats has contributed to the chemical evolution of Earth and could potentially be a source of renewable H2 in the future. However, the taxonomy of H2-producing microorganisms (hydrogenogens) in these mats has not been previously determined. With combined biogeochemical and molecular studies of microbial mats collected from Elkhorn Slough, Monterey Bay, California, we characterized the mechanisms of H2 production and identified a dominant hydrogenogen. Net production of H2 was observed within the upper photosynthetic layer (0–2 mm) of the mats under dark and anoxic conditions. Pyrosequencing of rRNA gene libraries generated from this layer demonstrated the presence of 64 phyla, with Bacteriodetes, Cyanobacteria and Proteobacteria dominating the sequences. Sequencing of rRNA transcripts obtained from this layer demonstrated that Cyanobacteria dominated rRNA transcript pyrotag libraries. An OTU affiliated to Microcoleus spp. was the most abundant OTU in both rRNA gene and transcript libraries. Depriving mats of sunlight resulted in an order of magnitude decrease in subsequent nighttime H2 production, suggesting that newly fixed carbon is critical to H2 production. Suppression of nitrogen (N2)-fixation in the mats did not suppress H2 production, which indicates that co-metabolic production of H2 during N2-fixation is not an important contributor to H2 production. Concomitant production of organic acids is consistent with fermentation of recently produced photosynthate as the dominant mode of H2 production. Analysis of rRNA % transcript:% gene ratios and H2-evolving bidirectional [NiFe] hydrogenase % transcript:% gene ratios indicated that Microcoelus spp. are dominant hydrogenogens in the Elkhorn Slough mats. PMID:22011721

  15. HazMatID (trademark) Replacement Project

    DTIC Science & Technology

    2013-05-09

    uses FTIR spectroscopy. It has the capability to identify chemical warfare agents, explosives , toxic industrial chemicals, narcotics, and...off-the-shelf, Fourier transform infrared spectroscopy ( FTIR ) instruments 16. SECURITY CLASSIFICATION OF: 17. LIMITATION OF ABSTRACT SAR 18...replacement for the Smiths Detection HazMatIDTM on the 886H allowance standard, a search of Fourier transform infrared spectroscopy ( FTIR ) instruments was

  16. HiMAT on lakebed after landing

    NASA Technical Reports Server (NTRS)

    1979-01-01

    The HiMAT (Highly Maneuverable Aircraft Technology) subscale research vehicle, seen here after landing to conclude a research flight, was flown by the NASA Dryden Flight Research Center, Edwards, California, from mid 1979 to January 1983. The aircraft demonstrated advanced fighter technologies that have been used in the development of many modern high performance military aircraft. Two vehicles were used in the research program conducted jointly by NASA and the Air Force Flight Dynamics Laboratory, Wright-Patterson AFB, Ohio. The two vehicles, flown a total of 26 times, provided data on the use of composites, aeroelastic tailoring, close-coupled canards and winglets. They investigated the interaction of these then-new technologies upon each other. About one-half the size of a standard manned fighter and powered by a small jet engine, the HiMAT vehicles were launched from NASA's B-52 carrier aircraft at an altitude of about 45,000 feet. They were flown remotely by a NASA research pilot from a ground station with the aid of a television camera mounted in the HiMAT cockpits. Technologies tested on the HiMAT vehicles appearing later on other aircraft include the extensive use of composites common now on military and commercial aircraft; rear-mounted wing and forward canard configuration used very successfully on the X-29 research aircraft flown at Dryden; and winglets, now used on many private and commercial aircraft to lessen wingtip drag and enhance fuel savings.

  17. Sunlight stimulates methane uptake and nitrous oxide emission from the High Arctic tundra.

    PubMed

    Li, Fangfang; Zhu, Renbin; Bao, Tao; Wang, Qing; Xu, Hua

    2016-12-01

    Many environmental factors affecting methane (CH4) and nitrous oxide (N2O) fluxes have been investigated during the processes of carbon and nitrogen transformation in the boreal tundra. However, effects of sunlight on CH4 and N2O fluxes and their budgets were neglected in the boreal tundra. Here, summertime CH4 and N2O fluxes in the presence and total absence of sunlight were investigated at the six tundra sites (DM1-DM6) on Ny-Ålesund in the High Arctic. The mean CH4 fluxes at the tundra sites ranged from -4.7 to -158.6μg CH4 m(-2)h(-1) in the presence of light, indicating that a large CH4 sink occurred in the tundra soils. However, enhanced CH4 emission in total absence of light occurred at all the tundra sites. The mean N2O fluxes ranged from 7.4 to 14.6μg N2O m(-2)h(-1) in the presence of light, whereas in the absence of light all the tundra sites generally released less N2O, and even significant N2O uptake occurred there. Soil temperature, chamber temperature and soil moisture showed no significant correlations with tundra CH4 and N2O flux. The presence of sunlight increased tundra CH4 uptake by 114.2μg CH4 m(-2)h(-1) and N2O emission by 10.9μg N2O m(-2)h(-1) compared with total absence of light. Overall our results showed that tundra ecosystem switched from CH4 sink and N2O emission source in the presence of light to CH4 emission source and N2O sink in the absence of light. Therefore sunlight had an important effect on CH4 and N2O budgets in the High Arctic tundra. The exclusion of sunlight might overestimate CH4 budgets, but underestimate N2O budgets in the Arctic tundra ecosystem.

  18. Changes in microbial communities along redox gradients in polygonized Arctic wet tundra soils

    SciTech Connect

    Lipson, David A.; Raab, Theodore K.; Parker, Melanie; Kelley, Scott T.; Brislawn, Colin J.; Jansson, Janet K.

    2015-08-01

    Summary This study investigated how microbial community structure and diversity varied with depth and topography in ice wedge polygons of wet tundra of the Arctic Coastal Plain in northern Alaska and what soil variables explain these patterns. We observed strong changes in community structure and diversity with depth, and more subtle changes between areas of high and low topography, with the largest differences apparent near the soil surface. These patterns are most strongly correlated with redox gradients (measured using the ratio of reduced Fe to total Fe in acid extracts as a proxy): conditions grew more reducing with depth and were most oxidized in shallow regions of polygon rims. Organic matter and pH also changed with depth and topography but were less effective predictors of the microbial community structure and relative abundance of specific taxa. Of all other measured variables, lactic acid concentration was the best, in combination with redox, for describing the microbial community. We conclude that redox conditions are the dominant force in shaping microbial communities in this landscape. Oxygen and other electron acceptors allowed for the greatest diversity of microbes: at depth the community was reduced to a simpler core of anaerobes,

  19. Changes in microbial communities along redox gradients in polygonized Arctic wet tundra soils

    SciTech Connect

    Lipson, David A.; Raab, Theodore K.; Parker, Melanie; Kelley, Scott T.; Brislawn, Colin J.; Jansson, Janet K.

    2015-07-21

    This study investigated how microbial community structure and diversity varied with depth and topography in ice wedge polygons of wet tundra of the Arctic Coastal Plain in northern Alaska, and what soil variables explain these patterns. We observed strong changes in community structure and diversity with depth, and more subtle changes between areas of high and low topography, with the largest differences apparent near the soil surface. These patterns are most strongly correlated with redox gradients (measured using the ratio of reduced Fe to total Fe in acid extracts as a proxy): conditions grew more reducing with depth and were most oxidized in shallow regions of polygon rims. Organic matter and pH also changed with depth and topography, but were less effective predictors of the microbial community structure and relative abundance of specific taxa. Of all other measured variables, lactic acid concentration was the best, in combination with redox, for describing the microbial community. We conclude that redox conditions are the dominant force in shaping microbial communities in this landscape. Oxygen and other electron acceptors allowed for the greatest diversity of microbes: at depth the community was reduced to a simpler core of anaerobes, dominated by fermenters (Bacteroidetes and Firmicutes).

  20. The effect of silver nanoparticles on seasonal change in arctic tundra bacterial and fungal assemblages.

    PubMed

    Kumar, Niraj; Palmer, Gerald R; Shah, Vishal; Walker, Virginia K

    2014-01-01

    The impact of silver nanoparticles (NPs) and microparticles (MPs) on bacterial and fungal assemblages was studied in soils collected from a low arctic site. Two different concentrations (0.066% and 6.6%) of Ag NPs and Ag MPs were tested in microcosms that were exposed to temperatures mimicking a winter to summer transition. Toxicity was monitored by differential respiration, phospholipid fatty acid analysis, polymerase chain reaction-denaturing gradient gel electrophoresis and DNA sequencing. Notwithstanding the effect of Ag MPs, nanosilver had an obvious, additional impact on the microbial community, underscoring the importance of particle size in toxicity. This impact was evidenced by levels of differential respiration in 0.066% Ag NP-treated soil that were only half that of control soils, a decrease in signature bacterial fatty acids, and changes in both richness and evenness in bacterial and fungal DNA sequence assemblages. Prominent after Ag NP-treatment were Hypocreales fungi, which increased to 70%, from only 1% of fungal sequences under control conditions. Genera within this Order known for their antioxidant properties (Cordyceps/Isaria) dominated the fungal assemblage after NP addition. In contrast, sequences attributed to the nitrogen-fixing Rhizobiales bacteria appeared vulnerable to Ag NP-mediated toxicity. This combination of physiological, biochemical and molecular studies clearly demonstrate that Ag NPs can severely disrupt the natural seasonal progression of tundra assemblages.

  1. Changes in microbial communities along redox gradients in polygonized Arctic wet tundra soils.

    PubMed

    Lipson, David A; Raab, Theodore K; Parker, Melanie; Kelley, Scott T; Brislawn, Colin J; Jansson, Janet

    2015-08-01

    This study investigated how microbial community structure and diversity varied with depth and topography in ice wedge polygons of wet tundra of the Arctic Coastal Plain in northern Alaska and what soil variables explain these patterns. We observed strong changes in community structure and diversity with depth, and more subtle changes between areas of high and low topography, with the largest differences apparent near the soil surface. These patterns are most strongly correlated with redox gradients (measured using the ratio of reduced Fe to total Fe in acid extracts as a proxy): conditions grew more reducing with depth and were most oxidized in shallow regions of polygon rims. Organic matter and pH also changed with depth and topography but were less effective predictors of the microbial community structure and relative abundance of specific taxa. Of all other measured variables, lactic acid concentration was the best, in combination with redox, for describing the microbial community. We conclude that redox conditions are the dominant force in shaping microbial communities in this landscape. Oxygen and other electron acceptors allowed for the greatest diversity of microbes: at depth the community was reduced to a simpler core of anaerobes, dominated by fermenters (Bacteroidetes and Firmicutes).

  2. The Effect of Silver Nanoparticles on Seasonal Change in Arctic Tundra Bacterial and Fungal Assemblages

    PubMed Central

    Kumar, Niraj; Palmer, Gerald R.; Shah, Vishal; Walker, Virginia K.

    2014-01-01

    The impact of silver nanoparticles (NPs) and microparticles (MPs) on bacterial and fungal assemblages was studied in soils collected from a low arctic site. Two different concentrations (0.066% and 6.6%) of Ag NPs and Ag MPs were tested in microcosms that were exposed to temperatures mimicking a winter to summer transition. Toxicity was monitored by differential respiration, phospholipid fatty acid analysis, polymerase chain reaction-denaturing gradient gel electrophoresis and DNA sequencing. Notwithstanding the effect of Ag MPs, nanosilver had an obvious, additional impact on the microbial community, underscoring the importance of particle size in toxicity. This impact was evidenced by levels of differential respiration in 0.066% Ag NP-treated soil that were only half that of control soils, a decrease in signature bacterial fatty acids, and changes in both richness and evenness in bacterial and fungal DNA sequence assemblages. Prominent after Ag NP-treatment were Hypocreales fungi, which increased to 70%, from only 1% of fungal sequences under control conditions. Genera within this Order known for their antioxidant properties (Cordyceps/Isaria) dominated the fungal assemblage after NP addition. In contrast, sequences attributed to the nitrogen-fixing Rhizobiales bacteria appeared vulnerable to Ag NP-mediated toxicity. This combination of physiological, biochemical and molecular studies clearly demonstrate that Ag NPs can severely disrupt the natural seasonal progression of tundra assemblages. PMID:24926877

  3. Wetting increases respiration loss from the Arctic tundra

    NASA Astrophysics Data System (ADS)

    Zona, Donatella; Lipson, David; Barott, Katie; Tha Paw U, Kyaw; Oberbauer, Steven; Olivas, Paulo; Hastings, Steven; Hinzman, Larry; Oechel, Walter

    2010-05-01

    Numerous studies (Billings et al. 1982; Peterson et al. 1984; Oberbauer et al. 1991; Funk et al., 1994; Oechel et al., 1998) have demonstrated that decreasing soil moisture and increasing soil oxygen increase respiration loss in the Arctic tundra. Warming and drying of tundra soils due to climate change are assumed to increase greenhouse gas emissions and the potential for strong positive feedbacks on the climate of the Arctic. However, here we show that an increase in the water table can lead to the same result, increasing respiration. In the largest scale water table manipulation experiment ever performed in the Arctic tundra, we showed that increasing the water table to 7.5 cm above the surface caused the ecosystem to more than half its net C uptake (9 gCm-2season-1) compared to the 23 gCm-2season-1 of a control site where water table was about 2 cm below the surface. Standing water saturated the moss layer, increased the heat conduction into the soil, and lead to higher soil temperature, deeper thaw and, surprisingly, to higher respiration rates in the most anaerobic area of the manipulation experiment. Probably, the increase in thaw depth increased substrate availability and freed sufficient Fe(III) to act as an electron acceptor in place of oxygen for respiration and CO2 production in these anaerobic soils (Zehnder and Stumm 1988, Kappler et al. 2004, Lipson et al. in review). In contrast to the general assumption that aerobic peat soils release more CO2 than soils under anaerobic conditions (Billing et al., 1982; Funk et al., 1994; Bridgham et al., 1998), here we show that this is not always the case. That the increase in the water table can result in increased respiration, even under nearly fully anaerobic conditions, through previously underestimated pathways, highlights yet another unexpected positive feedback on climate change of carbon exchange in the Arctic. That anaerobic conditions do not necessarily prevent CO2 loss in permafrost areas has major

  4. Evaluation of Degradation of Ceramic Fiber Mat by Acoustic Emission

    SciTech Connect

    Ito, Kaita; Enoki, Manabu; Takahashi, Hidetomo

    2005-04-09

    Alumina-silica fiber mat is widely used as thermal insulator because of its good stability under high temperature environment. However, this material degrades gradually during long-term use under pressure and elevated temperature. In this study, cyclic compression tests of the mat were conducted and monitored acoustic emission (AE) of the mat both at room temperature and elevated temperature. The degradation of mat was evaluated by AE parameters.

  5. Method for production of carbon nanofiber mat or carbon paper

    DOEpatents

    Naskar, Amit K.

    2015-08-04

    Method for the preparation of a non-woven mat or paper made of carbon fibers, the method comprising carbonizing a non-woven mat or paper preform (precursor) comprised of a plurality of bonded sulfonated polyolefin fibers to produce said non-woven mat or paper made of carbon fibers. The preforms and resulting non-woven mat or paper made of carbon fiber, as well as articles and devices containing them, and methods for their use, are also described.

  6. Evaluation of Degradation of Ceramic Fiber Mat by Acoustic Emission

    NASA Astrophysics Data System (ADS)

    Ito, Kaita; Enoki, Manabu; Takahashi, Hidetomo

    2005-04-01

    Alumina-silica fiber mat is widely used as thermal insulator because of its good stability under high temperature environment. However, this material degrades gradually during long-term use under pressure and elevated temperature. In this study, cyclic compression tests of the mat were conducted and monitored acoustic emission (AE) of the mat both at room temperature and elevated temperature. The degradation of mat was evaluated by AE parameters.

  7. Distribution of cultivated and uncultivated cyanobacteria and Chloroflexus-like bacteria in hot spring microbial mats

    NASA Technical Reports Server (NTRS)

    Ruff-Roberts, A. L.; Kuenen, J. G.; Ward, D. M.

    1994-01-01

    Oligodeoxynucleotide hybridization probes were developed to complement specific regions of the small subunit (SSU) rRNA sequences of cultivated and uncultivated cyanobacteria and Chloroflexus-like bacteria, which inhabit hot spring microbial mats. The probes were used to investigate the natural distribution of SSU rRNAs from these species in mats of Yellowstone hot springs of different temperatures and pHs as well as changes in SSU rRNA distribution resulting from 1-week in situ shifts in temperature, pH, and light intensity. Synechococcus lividus Y-7c-s SSU rRNA was detected only in the mat of a slightly acid spring, from which it may have been initially isolated, or when samples from a more alkaline spring were incubated in the more acid spring. Chloroflexus aurantiacus Y-400-fl SSU rRNA was detected only in a high-temperature mat sample from the alkaline Octopus Spring or when lower-temperature samples from this mat were incubated at the high-temperature site. SSU rRNAs of uncultivated species were more widely distributed. Temperature distributions and responses to in situ temperature shifts suggested that some of the uncultivated cyanobacteria might be adapted to high-, moderate-, and low-temperature ranges whereas an uncultivated Chloroflexus-like bacterium appears to have broad temperature tolerance. SSU rRNAs of all uncultivated species inhabiting a 48 to 51 degrees C Octopus Spring mat site were most abundant in the upper 1 mm and were not detected below a 2.5-to 3.5-mm depth, a finding consistent with their possible phototrophic nature. However, the effects of light intensity reduction on these SSU rRNAs were variable, indicating the difficulty of demonstrating a phototrophic phenotype in light reduction experiments.

  8. Lipid Biomarkers for a Hypersaline Microbial Mat Community

    NASA Technical Reports Server (NTRS)

    Jahnke, Linda L.; Embaye, Tsege; Turk, Kendra A.

    2003-01-01

    The use of lipid biomarkers and their carbon isotopic compositions are valuable tools for establishing links to ancient microbial ecosystems. As witnessed by the stromatolite record, benthic microbial mats grew in shallow water lagoonal environments where microorganisms had virtually no competition apart from the harsh conditions of hypersalinity, desiccation and intense light. Today, the modern counterparts of these microbial ecosystems find appropriate niches in only a few places where extremes eliminate eukaryotic grazers. Answers to many outstanding questions about the evolution of microorganisms and their environments on early Earth are best answered through study of these extant analogs. Lipids associated with various groups of bacteria can be valuable biomarkers for identification of specific groups of microorganisms both in ancient organic-rich sedimentary rocks (geolipids) and contemporary microbial communities (membrane lipids). Use of compound specific isotope analysis adds additional refinement to the identification of biomarker source, so that it is possible to take advantage of the 3C-depletions associated with various functional groups of organisms (i.e. autotrophs, heterotrophs, methanotrophs, methanogens) responsible for the cycling of carbon within a microbial community. Our recent work has focused on a set of hypersaline evaporation ponds at Guerrero Negro, Baja California Sur, Mexico which support the abundant growth of Microcoleus-dominated microbial mats. Specific biomarkers for diatoms, cyanobacteria, archaea, green nonsulfur (GNS), sulfate reducing, and methanotrophic bacteria have been identified. Analyses of the ester-bound fatty acids indicate a highly diverse microbial community, dominated by photosynthetic organisms at the surface.

  9. BRDF characteristics of tundra vegetation communities in Yamal, Western Siberia

    NASA Astrophysics Data System (ADS)

    Buchhorn, Marcel; Heim, Birgit; Walker, Donald A. Skip; Epstein, Howard; Leibman, Marina

    2013-04-01

    Satellite data from platforms with pointing capabilities (CHRIS/Proba, RapidEye) or from sensors with wide swath (AVHRR, MODIS, MERIS) is influenced by the bidirectional reflectance distribution function (BRDF). This effect can cause significant changes in the measured spectral surface reflectance depending on the solar illumination geometry and sensor viewing conditions. The Environmental Mapping and Analysis Program (EnMAP), a German hyperspectral mission with expected launch in 2016, will provide high spectral resolution observations with a ground sampling distance of 30 meters. Since the EnMAP sensor has pointing capabilities, both spectral and directional reflection characteristics need to be taken into account for the algorithms development for vegetation parameters. The 'hyperspectral method development for Arctic VEGetation biomes' (hy-Arc-VEG) project is part of the national preparation program for the EnMAP mission. Within the EnMAP projcect hy-Arc-VEG we developed a portable field spectro-goniometer, named ManTIS (Manual Transportable Instrument for Spherical BRDF observations), for the in-situ measurements of anisotropic effects of tundra surfaces (national and international patent pending - DE 102011117713.6). The goniometer was designed for field use in difficult as well as challenging terrain and climate. It is therefore of low weight, without electrical devices and weatherproof. It can be disassembled and packed into small boxes for transport. The current off-nadir viewing capacity is matched to the EnMAP sensor configuration (up to 30°). We carried out spectral field and goniometer measurements on the joint YAMAL 2011 expedition (RU-US-DE) organized by the Earth-Cryosphere Institute (ECI) in August 2011 on the Yamal Peninsula, northwestern Siberia, Russia. The field goniometer measurements (conducted under varying sun zenith angles) as well as field spectro-radiometrical measurements were carried out at the NASA Yamal Land Cover/Land Use Change

  10. From tropics to tundra: global convergence in plant functioning.

    PubMed

    Reich, P B; Walters, M B; Ellsworth, D S

    1997-12-09

    Despite striking differences in climate, soils, and evolutionary history among diverse biomes ranging from tropical and temperate forests to alpine tundra and desert, we found similar interspecific relationships among leaf structure and function and plant growth in all biomes. Our results thus demonstrate convergent evolution and global generality in plant functioning, despite the enormous diversity of plant species and biomes. For 280 plant species from two global data sets, we found that potential carbon gain (photosynthesis) and carbon loss (respiration) increase in similar proportion with decreasing leaf life-span, increasing leaf nitrogen concentration, and increasing leaf surface area-to-mass ratio. Productivity of individual plants and of leaves in vegetation canopies also changes in constant proportion to leaf life-span and surface area-to-mass ratio. These global plant functional relationships have significant implications for global scale modeling of vegetation-atmosphere CO2 exchange.

  11. From tropics to tundra: Global convergence in plant functioning

    PubMed Central

    Reich, Peter B.; Walters, Michael B.; Ellsworth, David S.

    1997-01-01

    Despite striking differences in climate, soils, and evolutionary history among diverse biomes ranging from tropical and temperate forests to alpine tundra and desert, we found similar interspecific relationships among leaf structure and function and plant growth in all biomes. Our results thus demonstrate convergent evolution and global generality in plant functioning, despite the enormous diversity of plant species and biomes. For 280 plant species from two global data sets, we found that potential carbon gain (photosynthesis) and carbon loss (respiration) increase in similar proportion with decreasing leaf life-span, increasing leaf nitrogen concentration, and increasing leaf surface area-to-mass ratio. Productivity of individual plants and of leaves in vegetation canopies also changes in constant proportion to leaf life-span and surface area-to-mass ratio. These global plant functional relationships have significant implications for global scale modeling of vegetation–atmosphere CO2 exchange. PMID:9391094

  12. Characterization of tundra lake margins with SAR-data

    NASA Astrophysics Data System (ADS)

    Bartsch, Annett; Widhalm, Barbara; Trofaier, Anna Maria; Högström, Elin; Heim, Birgit; Leibman, Marina; Dvorniko, Yury

    2014-05-01

    Synthetic aperture radar data have been proven to be suitable for monitoring hydrological properties including thaw lakes typical for tundra environments and are therefore a useful method to monitor changes in this region. However, the determination of accuracy of lake margin detection remains to be addressed. The quantification of uncertainties is crucial since such data are used to quantify (in many cases subtle) changes of land surface hydrology associated with permafrost conditions. The advantages and disadvantages of different frequencies with respect to spatial resolutions are discussed for TerraSAR-X, ALOS PALSAR (L-band) and ENVISAT ASAR (C-Band) data for several subarctic sites over Northern Eurasia. This study contributes to the PAGE21 (www.page21.eu, FP7) and COLD (Joint Russian-Austrian project, FWF/RFBR) projects as well as HGF EDA.

  13. Spatiotemporal variability in surface energy balance across tundra, snow and ice in Greenland.

    PubMed

    Lund, Magnus; Stiegler, Christian; Abermann, Jakob; Citterio, Michele; Hansen, Birger U; van As, Dirk

    2017-02-01

    The surface energy balance (SEB) is essential for understanding the coupled cryosphere-atmosphere system in the Arctic. In this study, we investigate the spatiotemporal variability in SEB across tundra, snow and ice. During the snow-free period, the main energy sink for ice sites is surface melt. For tundra, energy is used for sensible and latent heat flux and soil heat flux leading to permafrost thaw. Longer snow-free period increases melting of the Greenland Ice Sheet and glaciers and may promote tundra permafrost thaw. During winter, clouds have a warming effect across surface types whereas during summer clouds have a cooling effect over tundra and a warming effect over ice, reflecting the spatial variation in albedo. The complex interactions between factors affecting SEB across surface types remain a challenge for understanding current and future conditions. Extended monitoring activities coupled with modelling efforts are essential for assessing the impact of warming in the Arctic.

  14. Arctic tundra vegetation functional types based on photosynthetic physiology and optical properties

    NASA Astrophysics Data System (ADS)

    Huemmrich, K. F.; Gamon, J. A.; Tweedie, C. E.

    2011-12-01

    Climate change in tundra regions may alter vegetation species composition and ecosystem carbon balance, and remote sensing provides critical tools for monitoring these changes. Measurements of pure patches of key plant functional types (lichens, mosses, and vascular plants) in sedge tundra at Barrow AK, show three different values of light use efficiency (LUE). Also, discriminant analysis of patch reflectance identifies seven spectral bands that can separate each functional type and nongreen material (bare soil and dead leaves). These results were tested along a 100 m transect across the tundra. At every meter, midsummer spectral reflectance and vegetation coverage were measured. LUE estimated from coverage fractions varies widely, even over short distances. The patch-level discriminant functions successfully unmixed cover fractions of the functional types, with standard errors well within the expected measurement error of the coverage. These results demonstrate the use of hyperspectral remote sensing to provide direct estimates of tundra ecosystem LUE variability.

  15. Transformation of nitrogen compounds in the tundra soils of Northern Fennoscandia

    NASA Astrophysics Data System (ADS)

    Maslov, M. N.; Makarov, M. I.

    2016-07-01

    The transformation of organic nitrogen compounds in the soils of tundra ecosystems of Northern Fennoscandia has been studied under laboratory and natural conditions. Tundra soils contain significant reserves of total nitrogen, but they are poor in its extractable mineral and organic forms. The potential rates of the net mineralization and net immobilization of nitrogen by microorganisms vary among the soils and depend on the C: N ratio in the extractable organic matter and microbial biomass of soil. Under natural conditions, the rate of nitrogen net mineralization is lower than the potential rate determined under laboratory conditions by 6-25 times. The incubation of tundra soils in the presence of plants does not result in the accumulation of mineral nitrogen compounds either in the soil or in microbial biomass. This confirms the high competitive capacity of plants under conditions of limited nitrogen availability in tundra ecosystems.

  16. Fourfold higher tundra volatile emissions due to arctic summer warming

    NASA Astrophysics Data System (ADS)

    Lindwall, Frida; Schollert, Michelle; Michelsen, Anders; Blok, Daan; Rinnan, Riikka

    2016-03-01

    Biogenic volatile organic compounds (BVOCs), which are mainly emitted by vegetation, may create either positive or negative climate forcing feedbacks. In the Subarctic, BVOC emissions are highly responsive to temperature, but the effects of climatic warming on BVOC emissions have not been assessed in more extreme arctic ecosystems. The Arctic undergoes rapid climate change, with air temperatures increasing at twice the rate of the global mean. Also, the amount of winter precipitation is projected to increase in large areas of the Arctic, and it is unknown how winter snow depth affects BVOC emissions during summer. Here we examine the responses of BVOC emissions to experimental summer warming and winter snow addition—each treatment alone and in combination—in an arctic heath during two growing seasons. We observed a 280% increase relative to ambient in BVOC emissions in response to a 4°C summer warming. Snow addition had minor effects on growing season BVOC emissions after one winter but decreased BVOC emissions after the second winter. We also examined differences between canopy and air temperatures and found that the tundra canopy surface was on average 7.7°C and maximum 21.6°C warmer than air. This large difference suggests that the tundra surface temperature is an important driver for emissions of BVOCs, which are temperature dependent. Our results demonstrate a strong response of BVOC emissions to increasing temperatures in the Arctic, suggesting that emission rates will increase with climate warming and thereby feed back to regional climate change.

  17. Asynchronous population dynamics of Siberian lemmings across the Palaearctic tundra.

    PubMed

    Erlinge, Sam; Danell, Kjell; Frodin, Peter; Hasselquist, Dennis; Nilsson, Patric; Olofsson, Eva-Britt; Svensson, Mikael

    1999-06-01

    The synchrony of Siberian lemming (Lemmus sibiricus L.) population dynamics was investigated during a ship-borne expedition along the Palaearctic tundra coast in the summer of 1994. On 12 sites along the coast from the Kola Peninsula to Wrangel Island, relative densities of lemmings were recorded using a standardised snap-trapping programme. The phase position of the lemming cycle in each of the studied populations was determined based on current density estimates, signs of previous density and the age profile of each population (ageing based on eye lens mass). In addition, dendrochronological methods were used to determine when the last peak in the density of microtine populations occurred at each site. The examined lemming populations were in different phases of the lemming cycle. Some populations were in the peak phase, as indicated by high current densities, an age profile in which older individuals were well represented, and signs of high previous density (abundant old lemming faeces). Other populations were in the decline phase, as reflected in a moderate current density, a predominance of older individuals and signs of high previous density. Populations in the low phase had an extremely low current density and showed signs of high previous density, while populations in the increase phase had a moderate current density, a predominance of younger individuals and showed signs of low previous density. The results of phase determinations based on dendrochronological methods support the findings based on lemming demography. Recent Russian studies carried out on some of the sites also agreed with our phase determination results. Thus, on a regional scale (across the whole Palaearctic tundra), the population dynamics of Siberian lemmings can be considered asynchronous. However, sites situated adjacent to each other were often phase synchronous, suggesting a more fine-grained pattern of dynamics with synchrony over distances as long as 1000 km or so, e.g. the Yamal

  18. Climate feedbacks at the tundra-taiga interface.

    PubMed

    Harding, Richard; Kuhry, Peter; Christensen, Torben R; Sykes, Martin T; Dankers, Rutger; van der Linden, Sandra

    2002-08-01

    Feedbacks, or internal interactions, play a crucial role in the climate system. Negative feedback will reduce the impact of an external perturbation, a positive feedback will amplify the effect and could lead to an unstable system. Many of the feedbacks found in the climate system are positive; thus, for example, increasing CO2 levels will increase temperature, reduce the snow cover, increase the absorption of radiation and hence increase temperature further. The most obvious feedbacks, such as the snow example quoted above, are already included within our models of the climate and earth system. Others, such as the impact of increasing forest cover due to global warming, are only just being included. Others, such as, the impact of global warming on the northern peatlands and the impact of freshwater flows on the Arctic Ocean are not yet considered. The contrast in surface characteristics between low tundra vegetation to high taiga forest is considerable. The contrast is greatest in the winter, when the tundra is snow covered but the trees of the taiga protrude through the snow pack, and is probably the greatest contrast found on the land surface anywhere. This variation causes massive changes in the energy fluxes at the surface and hence the temperature conditions on the ground and within the atmosphere. There will be large resultant changes in the vegetation development, the carbon fluxes, the permafrost and the hydrology. The Arctic is already experiencing change and it is essential for us to understand the basic processes, and how these interact, to be confident of our predictions of environmental change in the future.

  19. Preparation of electrospun fiber mats using siloxane-containing vaterite and biodegradable polymer hybrids for bone regeneration.

    PubMed

    Fujikura, Kie; Lin, Sen; Nakamura, Jin; Obata, Akiko; Kasuga, Toshihiro

    2013-11-01

    An electrospun fiber mat using a new composite consisting of siloxane-containing vaterite (SiV) and poly(lactic-co-glycolic acid) (PLGA) (denoted by SiPLGVH) was prepared with the aim of applying it as a membrane for use in a guided bone regeneration (GBR) system. Another electrospun fiber mat using a previously described composite consisting of SiV and poly(L-lactic acid) (denoted by SiPVH) was also prepared as a comparative sample. SiPLG VH fiber mats showed superior results in terms of mechanical tensile properties and cellular behavior. Their elongation before failure was about eight times higher than that of SiPVH. The numbers of osteoblast-like cells that proliferated on the SiPLGVH fiber mats, regardless of the hydroxyapatite coating, were comparable to that of SiPVH. The cells spread more, two dimensionally, on the SiPLGVH fiber mats, since the pores between fibers were narrowed down because of swelling of the PLGA matrix during cell culture. This two-dimensional cellular proliferation quality on the SiPLGVH fiber mats is expected to be suitable for materials used in GBR, leading to control of infiltration of the soft tissue and great tissue integration with the surrounding tissue.

  20. Marine animals significantly increase tundra N2O and CH4 emissions in maritime Antarctica

    NASA Astrophysics Data System (ADS)

    Zhu, Renbin; Liu, Yashu; Xu, Hua; Ma, Dawei; Jiang, Shan

    2013-12-01

    studies on greenhouse gas emissions from animals concentrated on domestic animals, with limited data available from wild animals. The number of marine animals is potentially large in coastal Antarctica. In this paper, N2O and CH4 emissions were investigated from a penguin colony, a seal colony, a skua colony, the adjacent animal-lacking tundra, and background tundra sites to test the effects of marine animals on their fluxes in maritime Antarctica. Extremely high N2O emissions occurred in the penguin puddles (mean 392 µg N2O m-2 h-1) and seal wallows (mean 579 µg N2O m-2 h-1). The N2O emissions from animal colony tundra (13-57 µg N2O m-2 h-1) are much higher than those from the animal-lacking tundra, whereas the background tundra showed negligible N2O fluxes. Penguin puddles and seal wallows were stronger CH4 emitters than animal colony tundra soils, while animal-lacking tundra soils were strong CH4 sinks. Overall high N2O and CH4 emissions were modulated by soil physical and chemical processes associated with marine animal activities: sufficient supply of the nutrients NH4+-N and NO3--N, total nitrogen, and total organic carbon from marine animal excreta, animal tramp, and high soil water-filled pore space. Laboratory incubation experiments further confirmed that penguin and seal colony soils produced much higher N2O and CH4 emissions than animal-lacking tundra soils. Our results indicate that marine animal colonies are the hot spots for N2O and CH4 emissions in maritime Antarctica, and even at the global scale, and current climate warming will further increase their emissions.

  1. Metagenomics Reveals Pervasive Bacterial Populations and Reduced Community Diversity across the Alaska Tundra Ecosystem.

    PubMed

    Johnston, Eric R; Rodriguez-R, Luis M; Luo, Chengwei; Yuan, Mengting M; Wu, Liyou; He, Zhili; Schuur, Edward A G; Luo, Yiqi; Tiedje, James M; Zhou, Jizhong; Konstantinidis, Konstantinos T

    2016-01-01

    How soil microbial communities contrast with respect to taxonomic and functional composition within and between ecosystems remains an unresolved question that is central to predicting how global anthropogenic change will affect soil functioning and services. In particular, it remains unclear how small-scale observations of soil communities based on the typical volume sampled (1-2 g) are generalizable to ecosystem-scale responses and processes. This is especially relevant for remote, northern latitude soils, which are challenging to sample and are also thought to be more vulnerable to climate change compared to temperate soils. Here, we employed well-replicated shotgun metagenome and 16S rRNA gene amplicon sequencing to characterize community composition and metabolic potential in Alaskan tundra soils, combining our own datasets with those publically available from distant tundra and temperate grassland and agriculture habitats. We found that the abundance of many taxa and metabolic functions differed substantially between tundra soil metagenomes relative to those from temperate soils, and that a high degree of OTU-sharing exists between tundra locations. Tundra soils were an order of magnitude less complex than their temperate counterparts, allowing for near-complete coverage of microbial community richness (~92% breadth) by sequencing, and the recovery of 27 high-quality, almost complete (>80% completeness) population bins. These population bins, collectively, made up to ~10% of the metagenomic datasets, and represented diverse taxonomic groups and metabolic lifestyles tuned toward sulfur cycling, hydrogen metabolism, methanotrophy, and organic matter oxidation. Several population bins, including members of Acidobacteria, Actinobacteria, and Proteobacteria, were also present in geographically distant (~100-530 km apart) tundra habitats (full genome representation and up to 99.6% genome-derived average nucleotide identity). Collectively, our results revealed that

  2. Initial Conceptualization and Simulation of Arctic Tundra Landscape Evolution Using the Alaska Thermokarst Model

    NASA Astrophysics Data System (ADS)

    Bolton, W. R.; Romanovsky, V. E.; McGuire, A. D.; Grosse, G.; Lara, M. J.

    2014-12-01

    Thermokarst topography forms whenever ice-rich permafrost thaws and the ground subsides due to the volume loss when excess ground ice transitions to water. The Alaska Thermokarst Model (ATM) is a large-scale, state-and-transition model designed to simulate transitions between [non-]thermokarst landscape units, or cohorts. The ATM uses a frame-based methodology to track transitions and proportion of cohorts within a 1-km2 grid cell. In the arctic tundra environment, the ATM tracks thermokarst-related transitions between wetland tundra, graminoid tundra, shrub tundra, and thermokarst lakes. The transition from one cohort to another due to thermokarst processes can take place if thaw reaches ice-rich ground layers either due to pulse disturbance events such as a large precipitation event or fires or due to gradual active layer deepening that eventually results in penetration of the protective layer. The protective layer buffers the ice-rich soils from the land surface and is critical to determine how susceptible an area is to thermokarst degradation. The rate of terrain transition in our model is determined by the ice-content of the soil, the drainage efficiency (or ability of the landscape to store or transport water), and a cumulative probability of thermokarst initiation. Tundra types are allowed to transition from one type to another (ie wetland tundra to a graminoid tundra) under favorable climatic conditions. In this study, we present our conceptualization and initial simulation results from the ATM model for an 1792 km2 area on the Barrow Peninsula, Alaska. The area selected for simulation is located in a polygonal tundra landscape under varying degrees of thermokarst degradation. The goal of this modeling study is to simulate landscape evolution in response to thermokarst disturbance as a result of climate change. The ATM will eventually be incorporated into the Integrated Ecosystem Model (IEM) for Alaska and Northwest Canada for use in management decisions

  3. The Bering Land Bridge: a moisture barrier to the dispersal of steppe-tundra biota?

    NASA Astrophysics Data System (ADS)

    Elias, Scott A.; Crocker, Barnaby

    2008-12-01

    The Bering Land Bridge (BLB) connected the two principal arctic biological refugia, Western and Eastern Beringia, during intervals of lowered sea level in the Pleistocene. Fossil evidence from lowland BLB organic deposits dating to the Last Glaciation indicates that this broad region was dominated by shrub tundra vegetation, and had a mesic climate. The dominant ecosystem in Western Beringia and the interior regions of Eastern Beringia was steppe-tundra, with herbaceous plant communities and arid climate. Although Western and Eastern Beringia shared many species in common during the Late Pleistocene, there were a number of species that were restricted to only one side of the BLB. Among the vertebrate fauna, the woolly rhinoceros was found only to the west of the BLB, North American camels, bonnet-horned musk-oxen and some horse species were found only to the east of the land bridge. These were all steppe-tundra inhabitants, adapted to grazing. The same phenomenon can be seen in the insect faunas of the Western and Eastern Beringia. The steppe-tundra beetle fauna of Western Beringia was dominated by weevils of the genus Stephanocleonus, a group that was virtually absent from Eastern Beringia. The dry-adapted weevils, Lepidophorus lineaticollis and Vitavitus thulius were important members of steppe-tundra communities in Eastern Beringia, but were either absent or rare in Western Beringia. The leaf beetles Chrysolina arctica, C. brunnicornis bermani, and Galeruca interrupta circumdata were typical members of the Pleistocene steppe-tundra communities of Western Beringia, but absent from Eastern Beringia. On the other hand, some steppe tundra-adapted leaf beetles managed to occupy both sides of the BLB, such as Phaedon armoraciae. Much of the BLB remains unstudied, but on biogeographic grounds, it appears that there was some kind of biological filter that blocked the movements of some steppe-tundra plants and animals across the BLB.

  4. Ecophysiological Changes in Microbial Mats Incubated in a Greenhouse Collaboratory

    NASA Technical Reports Server (NTRS)

    Bebout, Brad; DesMarais, David J.; GarciaPichel, Ferran; Hogan, Mary; Jahnke, Linda; Keller, Richard M.; Miller, Scott R.

    2001-01-01

    Microbial mats are modern examples of the earliest microbial communities known. Among the best studied are microbial mats growing in hypersaline ponds managed for the production of salt by Exportadora de Sal, S.A. de C.V., Guerrero Negro, Baja California Sur, Mexico. In May, 2001, we collected mats from Ponds 4 and 5 in this system and returned them to Ames Research Center, where they have been maintained for a period of over nine months. We report here on both the ecophysiological changes occurring in the mats over that period of time as well as the facility in which they were incubated. Mats (approximately 1 sq. meter total area) were incubated in a greenhouse facility modified to provide the mats with natural levels of visible and ultraviolet radiation as well as constantly flowing, temperature-controlled water. Two replicated treatments were maintained, a 'high salinity' treatment (about 120 ppt) and a 'low salinity' treatment (about 90 ppt). Rates of net biological activity (e.g., photosynthesis, respiration, trace gas production) in the mats were relatively constant over the several months, and were similar to rates of activity measured in the field. However, over the course of the incubation, mats in both treatments changed in physical appearance. The most obvious change was that mats in the higher salinity treatments developed a higher proportion of carotenoid pigments (relative to chlorophyll), resulting in a noticeably orange color in the high salinity mats. This trend is also seen in the natural salinity gradient present at the field site. Changes in the community composition of the mats, as assayed by denaturing gradient gel electrophoresis (DGGE), as well as biomarker compounds produced in the mats were also monitored. The degree to which the mats kept in the greenhouse changed from the originally collected mats, as well as differences between high and low salinity mats will be discussed. Additional information is contained in the original extended

  5. Fire behavior, weather, and burn severity of the 2007 anaktuvuk river tundra fire, North Slope, Alaska

    USGS Publications Warehouse

    Jones, B.; Kolden, C.; Jandt, R.; Abatzoglou, J.; Urban, F.; Arp, C.

    2009-01-01

    In 2007, the Anaktuvuk River Fire (ARF) became the largest recorded tundra fire on the North Slope of Alaska. The ARF burned for nearly three months, consuming more than 100,000 ha. At its peak in early September, the ARF burned at a rate of 7000 ha d-1. The conditions potentially responsible for this large tundra fire include modeled record high summer temperature and record low summer precipitation, a late-season high-pressure system located over the Beaufort Sea, extremely dry soil conditions throughout the summer, and sustained southerly winds during the period of vegetation senescence. Burn severity mapping revealed that more than 80% of the ARF burned at moderate to extreme severity, while the nearby Kuparuk River Fire remained small and burned at predominantly (80%) low severity. While this study provides information that may aid in the prediction of future large tundra fires in northern Alaska, the fact that three other tundra fires that occurred in 2007 combined to burn less than 1000 ha suggests site specific complexities associated with tundra fires on the North Slope, which may hamper the development of tundra fire forecasting models.

  6. NDVI as a predictor of canopy arthropod biomass in the Alaskan arctic tundra.

    PubMed

    Sweet, Shannan K; Asmus, Ashley; Rich, Matthew E; Wingfield, John; Gough, Laura; Boelman, Natalie T

    2015-04-01

    The physical and biological responses to rapid arctic warming are proving acute, and as such, there is a need to monitor, understand, and predict ecological responses over large spatial and temporal scales. The use of the normalized difference vegetation index (NDVI) acquired from airborne and satellite sensors addresses this need, as it is widely used as a tool for detecting and quantifying spatial and temporal dynamics of tundra vegetation cover, productivity, and phenology. Such extensive use of the NDVI to quantify vegetation characteristics suggests that it may be similarly applied to characterizing primary and secondary consumer communities. Here, we develop empirical models to predict canopy arthropod biomass with canopy-level measurements of the NDVI both across and within distinct tundra vegetation communities over four growing seasons in the Arctic Foothills region of the Brooks Range, Alaska, USA. When canopy arthropod biomass is predicted with the NDVI across all four growing seasons, our overall model that includes all four vegetation communities explains 63% of the variance in canopy arthropod biomass, whereas our models specific to each of the four vegetation communities explain 74% (moist tussock tundra), 82% (erect shrub tundra), 84% (riparian shrub tundra), and 87% (dwarf shrub tundra) of the observed variation in canopy arthropod biomass. Our field-based study suggests that measurements of the NDVI made from air- and spaceborne sensors may be able to quantify spatial and temporal variation in canopy arthropod biomass at landscape to regional scales.

  7. Tundra ecosystems observed to be CO2 sources due to differential amplification of the carbon cycle.

    PubMed

    Belshe, E F; Schuur, E A G; Bolker, B M

    2013-10-01

    Are tundra ecosystems currently a carbon source or sink? What is the future trajectory of tundra carbon fluxes in response to climate change? These questions are of global importance because of the vast quantities of organic carbon stored in permafrost soils. In this meta-analysis, we compile 40 years of CO2 flux observations from 54 studies spanning 32 sites across northern high latitudes. Using time-series analysis, we investigated if seasonal or annual CO2 fluxes have changed over time, and whether spatial differences in mean annual temperature could help explain temporal changes in CO2 flux. Growing season net CO2 uptake has definitely increased since the 1990s; the data also suggest (albeit less definitively) an increase in winter CO2 emissions, especially in the last decade. In spite of the uncertainty in the winter trend, we estimate that tundra sites were annual CO2 sources from the mid-1980s until the 2000s, and data from the last 7 years show that tundra continue to emit CO2 annually. CO2 emissions exceed CO2 uptake across the range of temperatures that occur in the tundra biome. Taken together, these data suggest that despite increases in growing season uptake, tundra ecosystems are currently CO2 sources on an annual basis.

  8. Microclimate of Arctic Tree Line 2. Soil Microclimate of Tundra and Forest

    NASA Astrophysics Data System (ADS)

    Rouse, Wayne R.

    1984-01-01

    Forest and tundra soils display distinctive microclimates for a climatically normal year at Churchill. Forest soils are substantially warmer in the active layer than those of the tundra but the tundra active layer is deeper. Forest soils are much wetter than those of the tundra. This results from the deep winter snow pack, which provides abundant meltwater to already thawed soils. The soils remain wet throughout the year, and the large latent heat release delays the freezing of forest soils until a snow pack is established. As a result, soils stay relatively warm throughout winter and thaw rapidly and deeply before snow pack melting in the spring. The thaw period in the tree rooting zone is about 6 months, compared to 4 months at the same depth in tundra. The magnitude of soil heat storage is large, comprising 18% and 16% of net radiation in tundra and forest, respectively, during the thaw season. During freeze back it is the dominant heat exchange process. Between 80% and 90% of the total soil heat storage is involved in the latent heat exchange accompanying thawing and freezing. Soil heat flux plates strongly underestimate the ground heat exchange and are unreliable in permafrost terrain.

  9. Multi-Sensor Approach for Assessing the Taiga-Tundra Boundary

    NASA Technical Reports Server (NTRS)

    Ranson, K. J.; Sun, G.; Kharuk, V. I.; Kovacs, K.

    2003-01-01

    Monitoring the dynamics of the tundra-taiga boundary is critical for our understanding of the causes and consequences of the changes in this area. Because of its inaccessibility, remote sensing data will play an important role. In this study we examined the use of several remote sensing techniques for identifying the existing tundra-taiga ecotone. These include Landsat, MISR and RADARSAT data. High-resolution IKONOS images were used for local ground truth. It was found that on Landsat ETM+ summer images, reflectance from tundra and taiga at band 4 (NIR) is similar, but different at other bands such as red, and MIR bands. When the incidence angle is small, C-band HH-pol backscattering coefficients from both tundra and taiga are relatively high. The backscattering from tundra targets decreases faster than taiga targets when the incidence angle increases, because the tundra targets look smoother than taiga. Because of the shading effect of the vegetation, the MISR data, both multi-spectral data at nadir looking and multi-angle data at red and NIR bands, clearly show the transition zone.

  10. ChemMatCARS Data Archive

    DOE Data Explorer

    ChemMatCARS is a high-brilliance national synchrotron x-ray facility dedicated primarily to static and dynamic condensed matter chemistry and materials science. The scientific focus of the facility includes the study of surface and interfacial properties of liquids and solids as well as their bulk structure at atomic, molecular and mesoscopic length scales with high spatial and energy resolution. Experimental techniques supported by the facility include: 1) Liquid Surface X-ray Scattering; 2) Solid Surface X-ray Scattering; 3) Time-Resolved Crystallography; 4) Micro-Crystal Diffraction; 5) Small and Wide-angle X-ray Scattering. The data archive referenced here contains data for various components along the beamline within the First Optics Enclosure and is intended to be input or parameter data. See the Science Nuggets at http://cars9.uchicago.edu/chemmat/pages/nuggets.html for leads to some of the research conducted at the ChemMatCARS beamline.

  11. Microbial mats: an ecological niche for fungi

    PubMed Central

    Cantrell, Sharon A.; Duval-Pérez, Lisabeth

    2013-01-01

    Fungi were documented in tropical hypersaline microbial mats and their role in the degradation of complex carbohydrates (exopolymeric substance – EPS) was explored. Fungal diversity is higher during the wet season with Acremonium, Aspergillus, Cladosporium, and Penicillium among the more common genera. Diversity is also higher in the oxic layer and in young and transient mats. Enrichments with xanthan (a model EPS) show that without antibiotics (full community) degradation is faster than enrichments with antibacterial (fungal community) and antifungal (bacterial community) agents, suggesting that degradation is performed by a consortium of organisms (bacteria and fungi). The combined evidence from all experiments indicates that bacteria carried out approximately two-third of the xanthan degradation. The pattern of degradation is similar between seasons and layers but degradation is faster in enrichments from the wet season. The research suggests that fungi thrive in these hypersaline consortia and may participate in the carbon cycle through the degradation of complex carbohydrates. PMID:23577004

  12. Bioflumology: Microbial mat growth in flumes

    NASA Astrophysics Data System (ADS)

    Airo, A.; Weigert, S.; Beck, C.

    2014-04-01

    The emergence of oxygenic photosynthesis resulted in a transformational change of Earth's geochemical cycles and the subsequent evolution of life. However, it remains vigorously debated when this metabolic ability had evolved in cyanobacteria. This is largely because studies of Archean microfossil morphology, molecular biomarkers, and isotopic characteristics are frequently ambiguous. However, the high degree of morphological similarities between modern photosynthetic and Archean fossil mats has been interpreted to indicate phototactic microbial behavior or oxygenic photosynthesis. In order to better evaluate the relationship between mat morphology and metabolism, we here present a laboratory set-up for conducting month-long experiments in several sterilizable circular flumes designed to allow single-species cyanobacterial growth under adjustable fluid-flow conditions and protected from contamination.

  13. Astronaut Thomas Mattingly performs EVA during Apollo 16 transearth coast

    NASA Technical Reports Server (NTRS)

    1972-01-01

    Astronaut Thomas K. Mattingly II, command module pilot of the Apollo 16 lunar landing mission, performs extravehicular activity (EVA) during the Apollo 16 transearth coast. mattingly is assisted by Astronaut Charles M. Duke Jr., lunar module pilot. Mattingly inspected the SIM bay of the Service Module, and retrieved film from the Mapping and Panoramic cameras. Mattingly is wearing the helmet of Astronaut John W. Young, commander. The helmet's lunar extravehicular visor assembly helped protect Mattingly's eyes frmo the bright sun. This view is a frame from motion picture film exposed by a 16mm Maurer camera.

  14. A Theoretical Study of Landing Mat Behavior

    DTIC Science & Technology

    1969-07-01

    the end joint expcrience6 progressive eeteriora- tion uc ’-o - con:r ;itaticn oL mat breaks ( rivet filure, cracking, an. curling) [l21. The weakened...Establishment, Suffield s-69-4 Oct 1969 Dutch Friction -Cone Penetrometer Exploration of Research Area at Field 5, Eglin APB, Florida *S-69-5 Apr 1969 Cracking...Tests. 66 12. Comparison of Performance for Single- Wheel Tests . . . . . . . . .. . 67 13. End Joint Moment Transfer Deficiency Based Upon Uniform

  15. Labile carbon concentrations are strongly linked to plant production in Arctic tussock tundra soils

    NASA Astrophysics Data System (ADS)

    Darrouzet-Nardi, A.; Weintraub, M. N.; Euskirchen, E. S.; Steltzer, H.; Sullivan, P.

    2013-12-01

    The exchange of carbon and nutrients between plants and microbes is a key determinant of carbon balance in Arctic soils. Microbes rely on labile plant carbon for the energy they need to produce enzymes that can release nutrients and less energetically favorable carbon from soil organic matter. One of the main mechanisms of carbon transfer is rhizodeposition, the exudation of labile plant carbon such as sugars from roots into the rhizosphere. Despite the importance of this flow of energy and materials from plants to microbes, there have been few attempts to quantify labile carbon pools or fluxes in Arctic soils. To improve our knowledge of labile carbon dynamics in Arctic soils, we address two basic questions: (1) What are the seasonal patterns of labile carbon concentrations? and (2) How do seasonal patterns in labile carbon correlate with plant production, microbial biomass, and soil nutrients? We measured concentrations of total reducing sugars (TRS) in the soil solution of moist acidic tussock tundra on 28 dates during the 2012 growing season in 20 plots of an early snowmelt × warming experiment. We evaluated these total reducing sugar concentrations in the context of eddy flux carbon exchange data, plant NDVI, total dissolved carbon in soils, microbial biomass, and soil nutrients. Though we did not see treatment effects of the snowmelt × warming experiment, we did observe a clear seasonal pattern in TRS concentrations in which they started low at the time of thaw, then built to a maximum value around the time of peak plant physiology in July, followed by a decline as plants senesced. We observed a clear correlation between TRS and gross primary production (GPP). NDVI values also increased with TRS concentrations during the first half of the season and then leveled off as TRS began its decline. These relationships were in contrast to labile N concentrations, which remained at low concentrations all season. Our data suggest that rhizodeposition of labile carbon

  16. Increasing shrub abundance and N addition in Arctic tundra affect leaf and root litter decomposition differently

    NASA Astrophysics Data System (ADS)

    McLaren, J.; van de Weg, M. J.; Shaver, G. R.; Gough, L.

    2013-12-01

    Changes in global climate have resulted in a ';greening' of the Arctic as the abundance of deciduous shrub species increases. Consequently, not only the living plant community, but also the litter composition changes, which in turn can affect carbon turnover patterns in the Arctic. We examined effects of changing litter composition (both root and leaf litter) on decomposition rates with a litter bag study, and specifically focused on the impact of deciduous shrub Betula nana litter on litter decomposition from two evergreen shrubs (Ledum palustre, and Vaccinium vitis-idaea) and one graminoid (Eriophorum vaginatum) species. Additionally, we investigated how decomposition was affected by nutrient availability by placing the litterbags in an ambient and a fertilized moist acidic tundra environment. Measurements were carried out seasonally over 2 years (after snow melt, mid-growing season, end growing season). We measured litter mass loss over time, as well as the respiration rates (standardized for temperature and moisture) and temperature sensitivity of litter respiration at the time of harvesting the litter bags. For leaves, Betula litter decomposed faster than the other three species, with Eriophorum leaves decomposing the slowest. This pattern was observed for both mass loss and litter respiration rates, although the differences in respiration became smaller over time. Surprisingly, combining Betula with any other species resulted in slower overall weight loss rates than would be predicted based on monoculture weight loss rates. This contrasted with litter respiration at the time of sampling, which showed a positive mixing effect of adding Betula leaf liter to the other species. Apparently, during the first winter months (September - May) Betula litter decomposition is negatively affected by mixing the species and this legacy can still be observed in the total mass loss results later in the year. For root litter there were fewer effects of species identity on root

  17. Shrub expansion and climate feedbacks in Arctic tundra

    NASA Astrophysics Data System (ADS)

    Loranty, Michael M.; Goetz, Scott J.

    2012-03-01

    Arctic tundra ecosystems stand to play a substantial role in both the magnitude and rate of global climate warming over the coming decades and centuries. The exact nature of this role will be determined by the combined effects of currently amplified rates of climate warming in the Arctic (Serreze et al 2000) and a series of related positive climate feedbacks that include mobilization of permafrost carbon (Schuur et al 2008), decreases in surface albedo (Chapin et al 2005) and evapotranspiration (ET) mediated increases in atmospheric water vapor (Swann et al 2010). Conceptually, these feedback mechanisms are intuitive and readily comprehensible: warming-induced permafrost thaw will make new soil carbon pools accessible for microbial respiration, and increased vegetation productivity, expansion of shrubs in particular, will lower surface reflectance and increase ET. However, our current understanding of these feedback mechanisms relies largely on limited and local field studies and, as such, the quantitative estimates of feedback effects on regional and global climate require spatial upscaling and uncertainty estimates derived from models. Moreover, the feedback mechanisms interact and their combined net effect on climate is highly variable and not well characterized. A recent study by Bonfils et al (2012) is among the first to explicitly examine how shrub expansion in tundra ecosystems will impact regional climate. Using an Earth system model, Bonfils et al find that an idealized 20% increase in shrub cover north of 60°N latitude will lead to annual temperature increases of 0.66 °C and 1.84 °C, respectively, when the shrubs are 0.5 m and 2 m tall. The modeled temperature increases arise from atmospheric heating as a combined consequence of decreased albedo and increased ET. The primary difference between the two cases is associated with the fact that tall shrubs protrude above the snow, thus reducing albedo year round, whereas short shrubs are completely

  18. Biomarkers as Indicators of Respiration During Laboratory Incubations of Alaskan Arctic Tundra Permafrost Soils

    NASA Astrophysics Data System (ADS)

    Hutchings, J.; Schuur, E.; Bianchi, T. S.; Bracho, R. G.

    2015-12-01

    High latitude permafrost soils are estimated to store 1,330 - 1,580 Pg C, which account for ca. 40% of global soil C and nearly twice that of atmospheric C. Disproportionate heating of high latitude regions during climate warming potentially results in permafrost thaw and degradation of surficial and previously-frozen soil C. Understanding how newly-thawed soils respond to microbial degradation is essential to predicting C emissions from this region. Laboratory incubations have been a key tool in understanding potential respiration rates from high latitude soils. A recent study found that among the common soil measurements, C:N was the best predictor of C losses. Here, we analyzed Alaskan Arctic tundra soils from before and after a nearly 3-year laboratory incubation. Bulk geochemical values as well as the following biomarkers were measured: lignin, amino acids, n-alkanes, and glycerol dialkyl glycerol tetraethers (GDGT). We found that initial C:N did not predict C losses and no significant change in C:N between initial and final samples. The lignin acid to aldehyde (Ad:Al) degradation index showed the same results with a lack of C loss prediction and no significant change during the experiment. However, we did find that C:N and Ad:Al had a significant negative correlation suggesting behavior consistent with expectations. The failure to predict C losses was likely influenced by a number of factors, including the possibility that biomarkers were tracking a smaller fraction of slower cycling components of soil C. To better interpret these results, we also used a hydroxyproline-based amino acid degradation index and n-alkanes to estimate the contribution Sphagnum mosses to soil samples - known to have slower turnover times than vascular plants. Finally, we applied a GDGT soil temperature proxy to estimate the growing season soil temperatures before each incubation, as well as investigating the effects of incubation temperature on the index's temperature estimate.

  19. Methane dynamics in warming tundra of Northeast European Russia

    NASA Astrophysics Data System (ADS)

    Marushchak, M. E.; Friborg, T.; Biasi, C.; Herbst, M.; Johansson, T.; Kiepe, I.; Liimatainen, M.; Lind, S. E.; Martikainen, P. J.; Virtanen, T.; Soegaard, H.; Shurpali, N. J.

    2015-08-01

    Methane (CH4) fluxes were investigated in a subarctic Russian tundra site in a multi-approach study combining plot scale data, ecosystem scale eddy covariance (EC) measurements and fine resolution land cover classification scheme for regional upscaling. The flux data as measured by the two independent techniques resulted in a seasonal (May-October 2008) cumulative CH4 emission of 2.4 (EC) and 3.7 g CH4 m-2 (manual chambers) for the source area representative of the footprint of the EC instruments. Upon upscaling for the entire study region of 98.6 km2, the chamber measured flux data yielded a regional flux estimate of 6.7 g CH4 m-2 yr-1. Our upscaling efforts accounted for the large spatial variability in the distribution of the various land cover types (LCTs) predominant at our study site. In particular, wetlands with emissions ranging from 34 to 53 g CH4 m-2 yr-1 were the most dominant CH4 emitting surfaces. Emissions from thermokarst lakes were an order of magnitude lower, while the rest of the landscape (mineral tundra) was a weak sink for atmospheric methane. Vascular plant cover was a key factor in explaining the spatial variability of CH4 emissions among wetland types, as indicated by the positive correlation of emissions with the leaf area index (LAI). As elucidated through a stable isotope analysis, the plant transport was the dominant CH4 release pathway that discriminates against heavier δ13C-CH4. The methane released from wetlands was lighter than that in the surface porewater and δ13C in the emitted CH4 correlated with the vascular plant cover (LAI) implying that the plant-mediated CH4 release dominates. A mean value of δ13C obtained here for the emitted CH4, -68.2 ± 2.0 ‰, is within the range of values from other wetlands, thus reinforcing the use of inverse modeling tools to better constrain the CH4 budget. Based on the IPCC A1B emission scenario, a temperature increase of 7 °C has been predicted for the tundra region of European Russia by the

  20. Satellite based permafrost modeling in low land tundra landscapes

    NASA Astrophysics Data System (ADS)

    Langer, M.; Westermann, S.; Heikenfeld, M.; Boike, J.

    2012-12-01

    For most of the cryosphere components such as glaciers, ice sheets, sea ice, and snow satellite monitoring and change detection is well established since several decades. For permafrost, however, which represents the largest component of the Arctic cryosphere operational satellite monitoring schemes do not exist so far. Most of the processes which control the Arctic terrestrial ecosystems are related to the thermal state of permafrost and the freeze/thaw dynamics of the active layer. Hence, satellite based permafrost monitoring would be highly beneficial for the impact assessment of climate change in the Arctic. Permafrost monitoring could also be highly beneficial for the risk assessment of infrastructure in the Arctic such as roads, pipelines, and buildings which are directly affected by the thermal stability of permafrost. Increasing thaw depths and prolonged thaw periods can damage pipelines and interrupt the access to vast regions due to road damages. Sustained warming of permafrost can result in thermal erosion and landslides which threaten buildings and other infrastructural facilities. In this study we present a possible permafrost monitoring scheme based on a numerical heat flow model which is forced by multiple satellite products and initialized by weather reanalysis data. The used forcing and initialization dataset includes the land surface temperature (LST), the snow cover fraction (SCF), and the snow water equivalent (SWE). Previous studies demonstrated that MODIS LST products can deliver reasonable surface temperature measurements in tundra landscapes (Langer et al. 2010, Westermann et al. 2011). This study is based on the ten year record of the daily MOD11A1v5 and MYD11A1v5 land surface temperature products with a spatial resolution of 1km. The snow cover evolution is obtained from the daily GlobSnow SWE product with a spatial resolution of about 25km. In addition, the MODIS snow cover products MOD10A1v5 and MYD10v5 with a resolution of 1km are used

  1. Can lemmings control the expansion of woody plants on tundra?

    NASA Astrophysics Data System (ADS)

    Oksanen, Lauri; Oksanen, Tarja; Olofsson, Johan; Virtanen, Risto; Hoset, Katrine; Tuomi, Maria; Kyrö, Kukka

    2013-04-01

    The ongoing expansion of woody vegetation in the arctic, due to global warming, creates a positive feed back loop. Increasing abundance of woody plants reduces surface albedo both directly and via speeding up snow melt. Thus a successively greater fraction of incoming solar radiation is absorbed and converted to heat. Browsing mammals - both big and small - can prevent this by consuming woody plants. However, the grazer/browser community of many tundra areas is dominated by brown/Norwegian lemmings (Lemmus spp.) which eat graminoids and mosses and cannot use woody plants as forage. It would seem a priori likely that in such areas, mammalian herbivores speed up the expansion of woody plants by improving the chances of their seedlings to get established. We studied the impact of lemmings on woody plants by constructing lemming proof exclosures within piece high-altitude tundra at Joatkanjávri, northernmost Norway. The exclosures were constructed in 1998, during a period of low lemming densities, in snow-beds, where Norwegian lemmings (L. lemmus) were the only ecologically significant herbivorous mammals. (Reindeer migrate through the area in May, when snow-beds are inaccessible for them; during the fall migration, the area represents a dead end and is therefore avoided.) We chose pairs of maximally similar vegetation patches of 0.5 by 0.5 m and randomly assigned one of each pair to become an exclosure while the other plot was left open. The initial state of the vegetation was documented by the point frequency method. In 2008, after the 2007 lemming outbreak, the same documentation was repeated; thereafter the plots were harvested, the vegetation was sorted to species, oven dried and weighed. Exclusion of lemmings resulted to pronounced increase in community level plant biomass. Evergreen woody plants were especially favored by the exclusion of lemming: their above-ground biomass in exclosures was 14 times as great as their biomass on open reference plots. The

  2. Topographic Variation and Methane Production in Siberian Arctic Tundra

    NASA Astrophysics Data System (ADS)

    Eason, J.; Kuhn, M. A.; Dunn, S.; Spawn, S.; Schade, J. D.

    2014-12-01

    Understanding the fate of soil carbon when permafrost soils begin to thaw is critical for predicting the impact of permafrost thaw on global climate change. Microbial metabolism of soil carbon can produce carbon dioxide or methane, depending on soil conditions, and which pathway dominates has great significance for the strength of climate feedbacks since methane is a much more powerful greenhouse gas than carbon dioxide. In Arctic ecosystems, methane production from upland environments is not well understood and generally assumed to be low because conditions there are generally not favorable for methanogenesis. Small changes in topography, however, can lead to great heterogeneity in soil conditions at small scales that may lead to higher methane flux than generally recognized. In this study, we investigated patterns in methane, carbon dioxide, and oxygen concentrations in in surface waters of 15 small ponds in the Kolyma River watershed in Northeast Siberia. The ponds were distributed across a topographic gradient from upland tundra high in the landscape to low-lying ponds in the floodplain of the Kolyma River. In addition, we used chambers to measured methane fluxes from a variety of topographic depressions that ranged from pools to moss-dominated saturated soils lacking surface water, to dry soils dominated by sedges. Dissolved carbon dioxide concentrations in ponds showed no trend down the topographic gradient while methane concentrations decreased downslope. The decrease in methane production may be the result of a switch from green moss to brown moss, which may act as a host for methanotrophic bacteria. Ponds with green moss had significantly higher concentrations of methane than the ponds with brown moss. In addition, we found significantly higher methane fluxes from pools and saturated soils then from drier soils, which showed very low fluxes. These results suggest that upland tundra may be a significant source of methane, and that methane fluxes are driven

  3. Water track distribution and effects on carbon dioxide flux in an eastern Siberian upland tundra landscape

    NASA Astrophysics Data System (ADS)

    Curasi, Salvatore R.; Loranty, Michael M.; Natali, Susan M.

    2016-04-01

    Shrub expansion in tundra ecosystems may act as a positive feedback to climate warming, the strength of which depends on its spatial extent. Recent studies have shown that shrub expansion is more likely to occur in areas with high soil moisture and nutrient availability, conditions typically found in sub-surface water channels known as water tracks. Water tracks are 5-15 m wide channels of subsurface water drainage in permafrost landscapes and are characterized by deeper seasonal thaw depth, warmer soil temperatures, and higher soil moisture and nutrient content relative to adjacent tundra. Consequently, enhanced vegetation productivity, and dominance by tall deciduous shrubs, are typical in water tracks. Quantifying the distribution of water tracks may inform investigations of the extent of shrub expansion and associated impacts on tundra ecosystem carbon cycling. Here, we quantify the distribution of water tracks and their contribution to growing season CO2 dynamics for a Siberian tundra landscape using satellite observations, meteorological data, and field measurements. We find that water tracks occupy 7.4% of the 448 km2 study area, and account for a slightly larger proportion of growing season carbon uptake relative to surrounding tundra. For areas inside water tracks dominated by shrubs, field observations revealed higher shrub biomass and higher ecosystem respiration and gross primary productivity relative to adjacent upland tundra. Conversely, a comparison of graminoid-dominated areas in water tracks and inter-track tundra revealed that water track locations dominated by graminoids had lower shrub biomass yet increased net uptake of CO2. Our results show water tracks are an important component of this landscape. Their distribution will influence ecosystem structural and functional responses to climate, and is therefore of importance for modeling.

  4. The southernmost Andean Mountain soils: a toposequence from Nothofagus Forest to Sub Antarctic Tundra at Ushuaia, Tierra del Fuego

    NASA Astrophysics Data System (ADS)

    Firme Sá, Mariana M.; Schaefer, Carlos E.; Loureiro, Diego C.; Simas, Felipe N.; Francelino, Marcio R.; Senra, Eduardo O.

    2015-04-01

    Located at the southern tip of the Fuegian Andes Cordilhera, the Martial glacier witnessed a rapid process of retreat in the last century. Up to now little is known about the development and genesis of soils of this region. A toposequence of six soils, ranging from 430-925 m a.s.l, was investigated, with emphasis on genesis, chemical and mineralogical properties. The highest, youngest soil is located just below the Martial Glacier Martial Sur sector, and the lowest soils occur on sloping moraines under Nothofagus pumilio forests. Based on chemical, physical and mineralogical characteristics, the soils were classified according to the Soil taxonomy, being keyed out as Inceptisols and Entisols. Soil parent material of the soil is basically moraines, in which the predominant lithic components dominated by metamorphic rocks, with allochthonous contributions of wind-blown materials (very small fragments of volcanic glass) observed by hand lens in all horizons, except the highest profile under Tundra. In Nothofagus Deciduous Forests at the lowest part of the toposequence, poorly developed Inceptisols occur with Folistic horizons, with mixed "andic" and "spodic" characters, but with a predominance of andosolization (Andic Drystrocryepts). Under Tundra vegetation, Inceptisols are formed under hydromorphism and andosolization processes (Oxiaquic Dystrocrepts and Typic Dystrocrepts). On highland periglacial environments, soils without B horizon with strong evidence of cryoturbation and cryogenesis occur, without present-day permafrost down to 2 meters (Typic Cryorthents and Lithic Haploturbels). The mountain soils of Martial glacier generalize young, stony and rich in organic matter, with the exception of barely vegetated Tundra soils at higher altitudes. The forest soils are more acidic and have higher Al3+activity. All soils are dystrophic, except for the highest profile of the local periglacial environment. The organic carbon amounts are higher in forest soils and

  5. Flow-induced Development of Unicellular Cyanobacterial Mats

    NASA Astrophysics Data System (ADS)

    Gong, J.; Tice, M. M.

    2011-12-01

    Microbial mats/biofilms are abundant microbial growth structures throughout the history of life on Earth. Understanding the mechanisms for their morphogenesis and interactions with physical sedimentary forces are important topics that allow deeper understanding of related records. When subjected to hydrodynamic influences, mats are known to vary in morphology and structure in response to fluid shear, yet mechanistically, the underlying cellular architecture due to interactions with flow remain unexplained. Moreover, mats are found to emerge larger scale roughness elements and modified cohesive strength growing under flow. It is a mystery how and why these mat-community-level features are linked in association with modified boundary layers at the mats surface. We examined unicellular cyanobacterium Synechocystis sp. PCC 6803 in a circular flow bioreactor designed to maintain a fixed set of hydrodynamic conditions. The use of monoculture strains and unidirectional currents, while not replicating natural mat systems (almost certainly multi-species and often multi-directional currents under complex wind or tidal wave actions), helps to simplify these systems and allows for specific testing of hypotheses regarding how mats evolve distinctive morphologies induced by flow. The unique design of the reactor also makes measurements such as critical erosional shear stress of the mats possible, in addition to microscopic, macroscopic imaging and weeks of continuous mats growth monitoring. We report the finding that linear chains, filament-like cell groups were present from unicellular cyanobacterial mats growing under flow (~1-5 cm/s) and these structures are organized within ~1-3mm size streamers and ~0.5-1mm size nodular macrostructures. Ultra-small, sub-micron thick EPS strings are observed under TEM and are likely the cohesive architectural elements in mats across different fluid regimes. Mat cohesion generally grows with and adapts to increasing flow shear stress within

  6. Large tundra methane burst during onset of freezing.

    PubMed

    Mastepanov, Mikhail; Sigsgaard, Charlotte; Dlugokencky, Edward J; Houweling, Sander; Ström, Lena; Tamstorf, Mikkel P; Christensen, Torben R

    2008-12-04

    Terrestrial wetland emissions are the largest single source of the greenhouse gas methane. Northern high-latitude wetlands contribute significantly to the overall methane emissions from wetlands, but the relative source distribution between tropical and high-latitude wetlands remains uncertain. As a result, not all the observed spatial and seasonal patterns of atmospheric methane concentrations can be satisfactorily explained, particularly for high northern latitudes. For example, a late-autumn shoulder is consistently observed in the seasonal cycles of atmospheric methane at high-latitude sites, but the sources responsible for these increased methane concentrations remain uncertain. Here we report a data set that extends hourly methane flux measurements from a high Arctic setting into the late autumn and early winter, during the onset of soil freezing. We find that emissions fall to a low steady level after the growing season but then increase significantly during the freeze-in period. The integral of emissions during the freeze-in period is approximately equal to the amount of methane emitted during the entire summer season. Three-dimensional atmospheric chemistry and transport model simulations of global atmospheric methane concentrations indicate that the observed early winter emission burst improves the agreement between the simulated seasonal cycle and atmospheric data from latitudes north of 60 degrees N. Our findings suggest that permafrost-associated freeze-in bursts of methane emissions from tundra regions could be an important and so far unrecognized component of the seasonal distribution of methane emissions from high latitudes.

  7. Differential microbial communities in hot spring mats from Western Thailand.

    PubMed

    Portillo, M C; Sririn, V; Kanoksilapatham, W; Gonzalez, J M

    2009-03-01

    The microbial communities of freshwater hot spring mats from Boekleung (Western Thailand) were studied. Temperatures ranged from over 50 up to 57 degrees C. Green-, red-, and yellow colored mat layers were analyzed. In order to detect the major components of the microbial communities constituting the mat as well as the microorganisms showing significant metabolic activity, samples were analyzed using DNA- and RNA-based molecular techniques, respectively. Microbial community fingerprints, performed by denaturing gradient gel electrophoresis (DGGE), revealed clear differences among mat layers. Thermophilic phototrophic microorganisms, Cyanobacteria and Chloroflexi, constituted the major groups in these communities (on average 65 and 51% from DNA and RNA analyses, respectively). Other bacteria detected in the mat were Bacteroidetes, members of the Candidate Division OP10, Actinobacteria, and Planctomycetes. Differently colored mat layers showed characteristic bacterial communities and the major components of the metabolically active fraction of these communities have been identified.

  8. Pressure Sensitive Mats as Safety Devices in Danger Zones.

    PubMed

    Dąbrowski, Stanisław; Brański, Zygfryd

    1998-01-01

    Developing prototypes of pressure sensitive mats and testing their practical application were the aims of this study. Two contact plate mats were designed and constructed: rubber-rubber (R) and metal-metal (M). A recipe for rubber mixes and the production technology were prepared. Two laboratory test stands for measuring the actuating force, response time, static pressure resistance, and the durability of the mats were constructed. Computer software was written to control the operation of those test stands. Methods of testing pressure sensitive mats were based on PrDIN 31 006 (Deutsches Institut fur Normung [DIN], 1990) and EN 1760-1 (Comite Europeen de Normalisation [CEN], 1997). Both prototypes of contact plate mats were tested under laboratory and industrial conditions. The test results proved that the design was correct, the setup requirements were fulfilled, and the mats were efficient and reliable in the industrial environment.

  9. Domibacillus tundrae sp. nov., isolated from active layer soil of tussock tundra in Alaska, and emended description of the genus Domibacillus.

    PubMed

    Gyeong, Hye Ryeon; Baek, Kiwoon; Hwang, Chung Yeon; Park, Key Hun; Kim, Hye Min; Lee, Hong Kum; Lee, Yoo Kyung

    2015-10-01

    A novel Gram-stain-positive, spore-forming, aerobic, motile and rod-shaped bacterium designated strain PAMC 80007T was isolated from an active layer soil sample of Council, Alaska. Optimal growth of strain PAMC 80007T was observed at 30 °C, pH 7.0 and in the presence of 2 % (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequence indicated that strain PAMC 80007T belonged to the genus Domibacillus. This strain was closely related to Domibacillus enclensis (98.3 %), Domibacillus robiginosus (98.3 %) and Domibacillus indicus (97.2 %). Genomic DNA G+C content was 43.5 mol% and genomic relatedness analyses based on the average nucleotide identity and the genome-to-genome distance showed that strain PAMC 80007T is clearly distinguished from the closely related species of the genus Domibacillus. The major fatty acids (>5 %) were iso-C15 : 0 (24.7 %), C16 : 1ω11c (16.8 %), anteiso-C15 : 0 (16.5 %), C16 : 0 (15.6 %) and anteiso-C17 : 0 (8.7 %). The major respiratory isoprenoid quinones were menaquinone-6 (MK-6) and menaquinone-7 (MK-7), and the polar lipid profile contained diphosphatidylglycerol, phosphatidylglycerol, phosphoglycolipid, phospholipid and two unidentified lipids. meso-Diaminopimelic acid (type A1γ) was present in the cell-wall peptidoglycan, and the major whole-cell sugar was ribose with a minor quantity of glucose. Results from a polyphasic study suggested that strain PAMC 80007T represents a novel species of the genus Domibacillus for which the name Domibacillus tundrae sp. nov. is proposed. The type strain is PAMC 80007T ( = JCM 30371T = KCTC 33549T = DSM 29572T). An emended description of the genus Domibacillus is also provided.

  10. Carbon and Oxygen Budgets of Hypersaline Cyanobacterial Mats: Effects of Tidal Cycle and Temperature

    NASA Technical Reports Server (NTRS)

    DesMarais, David J.; Bebout, Brad M.; Carpenter, Steven; Discipulo, Mykell; Turk, Kendra

    2003-01-01

    The hierarchical organization of microbial ecosystems determines the rates of processes that shape Earth#s environment, define the stage upon which major evolutionary events occurred, and create biosignatures in sediments and atmospheres. In cyanobacterial mats, oxygenic photosynthesis provides energy, organic substrates and oxygen to the ecosystem. Incident light changes with depth in the mat, both in intensity and spectral composition, and counteracting gradients of oxygen and sulfide shape the chemical microenvironment. A combination of benefits and hazards of light, oxygen and sulfide promotes the allocation of the various essential mat processes between light and dark periods and to various depths in the mat. Microbiota produce hydrogen, small organic acids, and nitrogen and sulfur species. Such compounds fuel a flow of energy and electrons in these ecosystems and thus shape interactions between groups of microorganisms. Coordinated observations of population distribution, abundance, and activity for an entire community are making fundamental questions in ecology accessible. These questions address those factors that sustain the remarkable diversity of microorganisms that are now being revealed by molecular techniques. These questions also target the processes that shape the various kinds of biosignatures that we will seek, both in ancient rocks from Earth and Mars, and in atmospheres of distant planets beyond our Solar System.

  11. Proliferation of Purple Sulphur Bacteria at the Sediment Surface Affects Intertidal Mat Diversity and Functionality

    PubMed Central

    Hubas, Cédric; Jesus, Bruno; Ruivo, Mickael; Meziane, Tarik; Thiney, Najet; Davoult, Dominique; Spilmont, Nicolas; Paterson, David M.; Jeanthon, Christian

    2013-01-01

    There is a relative absence of studies dealing with mats of purple sulphur bacteria in the intertidal zone. These bacteria display an array of metabolic pathways that allow them to disperse and develop under a wide variety of conditions, making these mats important in terms of ecosystem processes and functions. Mass blooms of purple sulphur bacteria develop during summer on sediments in the intertidal zone especially on macroalgal deposits. The microbial composition of different types of mats differentially affected by the development of purple sulphur bacteria was examined, at low tide, using a set of biochemical markers (fatty acids, pigments) and composition was assessed against their influence on ecosystem functions (sediment cohesiveness, CO2 fixation). We demonstrated that proliferation of purple sulphur bacteria has a major impact on intertidal mats diversity and functions. Indeed, assemblages dominated by purple sulphur bacteria (Chromatiaceae) were efficient exopolymer producers and their biostabilisation potential was significant. In addition, the massive growth of purple sulphur bacteria resulted in a net CO2 degassing whereas diatom dominated biofilms represented a net CO2 sink. PMID:24340018

  12. Proliferation of purple sulphur bacteria at the sediment surface affects intertidal mat diversity and functionality.

    PubMed

    Hubas, Cédric; Jesus, Bruno; Ruivo, Mickael; Meziane, Tarik; Thiney, Najet; Davoult, Dominique; Spilmont, Nicolas; Paterson, David M; Jeanthon, Christian

    2013-01-01

    There is a relative absence of studies dealing with mats of purple sulphur bacteria in the intertidal zone. These bacteria display an array of metabolic pathways that allow them to disperse and develop under a wide variety of conditions, making these mats important in terms of ecosystem processes and functions. Mass blooms of purple sulphur bacteria develop during summer on sediments in the intertidal zone especially on macroalgal deposits. The microbial composition of different types of mats differentially affected by the development of purple sulphur bacteria was examined, at low tide, using a set of biochemical markers (fatty acids, pigments) and composition was assessed against their influence on ecosystem functions (sediment cohesiveness, CO2 fixation). We demonstrated that proliferation of purple sulphur bacteria has a major impact on intertidal mats diversity and functions. Indeed, assemblages dominated by purple sulphur bacteria (Chromatiaceae) were efficient exopolymer producers and their biostabilisation potential was significant. In addition, the massive growth of purple sulphur bacteria resulted in a net CO2 degassing whereas diatom dominated biofilms represented a net CO2 sink.

  13. Microscale characterization of dissolved organic matter production and uptake in marine microbial mat communities

    NASA Technical Reports Server (NTRS)

    Paerl, H. W.; Bebout, B. M.; Joye, S. B.; Des Marais, D. J.

    1993-01-01

    Intertidal marine microbial mats exhibited biologically mediated uptake of low molecular weight dissolved organic matter (DOM), including D-glucose, acetate, and an L-amino acid mixture at trace concentrations. Uptake of all compounds occurred in darkness, but was frequently enhanced under natural illumination. The photosystem 2 inhibitor, 3-(3,4-dichlorophenyl)-1,1-dimethyl urea (DCMU) generally failed to inhibit light-stimulated DOM uptake. Occasionally, light plus DCMU-amended treatments led to uptake rates higher than light-incubated samples, possibly due to phototrophic bacteria present in subsurface anoxic layers. Uptake was similar with either 3H- or 14C-labeled substrates, indicating that recycling of labeled CO2 via photosynthetic fixation was not interfering with measurements of light-stimulated DOM uptake. Microautoradiographs showed a variety of pigmented and nonpigmented bacteria and, to a lesser extent, cyanobacteria and eucaryotic microalgae involved in light-mediated DOM uptake. Light-stimulated DOM uptake was often observed in bacteria associated with sheaths and mucilage surrounding filamentous cyanobacteria, revealing a close association of organisms taking up DOM with photoautotrophic members of the mat community. The capacity for dark- and light-mediated heterotrophy, coupled to efficient retention of fixed carbon in the mat community, may help optimize net production and accretion of mats, even in oligotrophic waters.

  14. A Cyanine Dye Encapsulated Porous Fibrous Mat for Naked-Eye Ammonia Sensing.

    PubMed

    Ji, Chendong; Ma, Lijing; Yin, Meizhen; Yang, Wantai; Pan, Kai

    2016-08-19

    Electrospun ultrathin fiber-based sensors are desirable because of their practicality and sensitivity. Ammonia-detection systems are in high demand in different areas, including the industrial and agricultural fields. However, current technologies rely on large and complex instruments that restrict their actual utilization. Herein, we report a flexible naked-eye ammonia sensor, the polylactic acid-cyanine (PLA-Cy) fibrous mat, which was fabricated by blending a carboxyl-functionalized cyanine dye (D1) into electospun PLA porous fibers. The sensing mat was shown to undergo a naked-eye-detectable color change from white to blue upon exposure to ammonia vapor. The mat showed high selectivity to ammonia gas with a detection limit of 3.3 ppm. Aggregated D1 was first encapsulated by PLA and was then ionized by NH3 . These mechanisms were examined by photophysical studies and scanning electron microscopy. The aggregation-deaggregation process of D1 in the PLA-Cy fibrous mat led to the color change. This work provides a facile method for the naked-eye detection of ammonia and a novel strategy for the use of organic dyes in ammonia sensing.

  15. Super-Hydrophobic High Throughput Electrospun Cellulose Acetate (CA) Nanofibrous Mats as Oil Selective Sorbents

    NASA Astrophysics Data System (ADS)

    Han, Chao

    The threat of oil pollution increases with the expansion of oil exploration and production activities, as well as the industrial growth around the world. Use of sorbents is a common method to deal with the oil spills. In this work, an advanced sorbent technology is described. A series of non-woven Cellulose Acetate (CA) nanofibrous mats with a 3D fibrous structure were synthesized by a novel high-throughput electrospinning technique. The precursor was solutions of CA/ acetic acid-acetone in various concentrations. Among them, 15.0% CA exhibits a superhydrophobic surface property, with a water contact angle of 128.95°. Its oil sorption capacity is many times higher the oil sorption capacity of the best commercial sorbent available in the market. Also, it showed good buoyancy properties on the water both as dry-mat and oil-saturated mat. In addition, it is biodegradable, easily available, easily manufactured, so the CA nanofibrous mat is an excellent candidate as oil sorbent for oil spill in water treatment.

  16. Atmospheric methane sources - Alaskan tundra bogs, an alpine fen, and a subarctic boreal marsh

    NASA Technical Reports Server (NTRS)

    Sebacher, D. I.; Harriss, R. C.; Grice, S. S.; Bartlett, K. B.; Sebacher, S. M.

    1986-01-01

    Methane (CH4) flux measurements from Alaska tundra bogs, an alpine fen, and a subarctic boreal marsh were obtained at field sites ranging from Prudhoe Bay on the coast of the Arctic Ocean to the Alaskan Range south of Fairbanks during August 1984. In the tundra, average CH4 emission rates varied from 4.9 mg CH4 per sq m per day (moist tundra) to 119 mg CH4 per sq m per day (waterlogged tundra). Fluxes averaged 40 mg CH4 per sq m per day from wet tussock meadows in the Brooks Range and 289 mg Ch4 per sq m per day from an alpine fen in the Alaskan Range. The boreal marsh had an average CH4 emission rate of 106 mg CH4 per sq m per day. Significant emissions were detected in tundra areas where peat temperatures were as low as 4 C, and permafrost was only 25 cm below the ground surface. Emission rates from the 17 sites sampled were found to be logarithmically related to water levels at the sites. Extrapolation of the data to an estimate of the total annual CH4 emission from all arctic and boreal wetlands suggests that these ecosystems are a major source of atmospheric CH4 and could account for up to 23 percent of global CH4 emissions from wetlands.

  17. Modeling carbon-nutrient interactions during the early recovery of tundra after fire.

    PubMed

    Jiang, Yueyang; Rastetter, Edward B; Rocha, Adrian V; Pearce, Andrea R; Kwiatkowski, Bonnie L; Shaver, Gaius R

    2015-09-01

    Fire frequency has dramatically increased in the tundra of northern Alaska, USA, which has major implications for the carbon budget of the region and the functioning of these ecosystems, which support important wildlife species. We investigated the postfire succession of plant and soil carbon (C), nitrogen (N), and phosphorus (P) fluxes and stocks along a burn severity gradient in the 2007 Anaktuvuk River fire scar in northern Alaska. Modeling results indicated that the early regrowth of postfire tundra vegetation was limited primarily by its canopy photosynthetic potential, rather than nutrient availability, because of the initially low leaf area and relatively high inorganic N and P concentrations in soil. Our simulations indicated that the postfire recovery of tundra vegetation was sustained predominantly by the uptake of residual inorganic N (i.e., in the remaining ash), and the redistribution of N and P from soil organic matter to vegetation. Although residual nutrients in ash were higher in the severe burn than the moderate burn, the moderate burn recovered faster because of the higher remaining biomass and consequent photosynthetic potential. Residual nutrients in ash allowed both burn sites to recover and exceed the unburned site in both aboveground biomass and production five years after the fire. The investigation of interactions among postfire C, N, and P cycles has contributed to a mechanistic understanding of the response of tundra ecosystems to fire disturbance. Our study provided insight on how the trajectory of recovery of tundra from wildfire is regulated during early succession.

  18. Below-ground carbon transfer among Betula nana may increase with warming in Arctic tundra.

    PubMed

    Deslippe, Julie R; Simard, Suzanne W

    2011-11-01

    • Shrubs are expanding in Arctic tundra, but the role of mycorrhizal fungi in this process is unknown. We tested the hypothesis that mycorrhizal networks are involved in interplant carbon (C) transfer within a tundra plant community. • Here, we installed below-ground treatments to control for C transfer pathways and conducted a (13)CO(2)-pulse-chase labelling experiment to examine C transfer among and within plant species. • We showed that mycorrhizal networks exist in tundra, and facilitate below-ground transfer of C among Betula nana individuals, but not between or within the other tundra species examined. Total C transfer among conspecific B. nana pairs was 10.7 ± 2.4% of photosynthesis, with the majority of C transferred through rhizomes or root grafts (5.2 ± 5.3%) and mycorrhizal network pathways (4.1 ± 3.3%) and very little through soil pathways (1.4 ± 0.35%). • Below-ground C transfer was of sufficient magnitude to potentially alter plant interactions in Arctic tundra, increasing the competitive ability and mono-dominance of B. nana. C transfer was significantly positively related to ambient temperatures, suggesting that it may act as a positive feedback to ecosystem change as climate warms.

  19. Herbivory and nutrient limitation protect warming tundra from lowland species' invasion and diversity loss.

    PubMed

    Eskelinen, Anu; Kaarlejärvi, Elina; Olofsson, Johan

    2017-01-01

    Herbivory and nutrient limitation can increase the resistance of temperature-limited systems to invasions under climate warming. We imported seeds of lowland species to tundra under factorial treatments of warming, fertilization, herbivore exclusion and biomass removal. We show that warming alone had little impact on lowland species, while exclusion of native herbivores and relaxation of nutrient limitation greatly benefitted them. In contrast, warming alone benefitted resident tundra species and increased species richness; however, these were canceled by negative effects of herbivore exclusion and fertilization. Dominance of lowland species was associated with low cover of tundra species and resulted in decreased species richness. Our results highlight the critical role of biotic and abiotic filters unrelated to temperature in protecting tundra under warmer climate. While scarcity of soil nutrients and native herbivores act as important agents of resistance to invasions by lowland species, they concurrently promote overall species coexistence. However, when these biotic and abiotic resistances are relaxed, invasion of lowland species can lead to decreased abundance of resident tundra species and diminished diversity.

  20. Methane emissions from tundra environments in the Yukon-Kuskokwin Delta, Alaska

    SciTech Connect

    Bartlett, K.B.; Crill, P.M.; Sass, R.L.; Harriss, R.C.; Dise, N.B. New Hampshire Univ., Durham Rice Univ., Houston, TX Minnesota Univ., Minneapolis )

    1992-10-01

    This paper reports CH[sub 4] flux to the atmosphere from a variety of tundra environments near Bethel, Alaska during the summer months of 1988. Emissions from wet meadow tundra averaged 144 +/- 31 mg/sq m/d and ranged from 15.6 to 426 mg/sq m/d varying with soil moisture and temperature. Flux from the drier upland tundra was about two orders of magnitude lower and averaged 2.3 +/- 1.1 mg/sq m/d. Tundra lakes emit CH4 from the open water surface as well as from fringing aquatic vegetation; the presence of vegetation significantly enhanced flux over open water rates. Calculated diffusive fluxes from open water varied with lake size, the large lakes emitting 3.8 mg/sq m/d and small lakes emitting an average of 77 mg/sq m/d. An updated estimate of global emissions from tundra indicates an annual fluxes of approximately 11 +/- 3 Tg CH[sub 4]. 41 refs.

  1. Development of an Energy-based Runoff Generation Model in Arctic Tundra Regions

    NASA Astrophysics Data System (ADS)

    Thorne, R.; Quinton, W. L.

    2009-05-01

    Recently, the demand for improved predictive models of runoff in arctic tundra regions has increased, given uncertainties regarding the future availability of northern freshwater resources related to climate change and expanding resource development. Hydrological characteristics of the arctic tundra are substantially different from those of temperate regions in which traditional runoff generation theories were based. Therefore, theories that apply specifically to the arctic tundra need to be incorporated into a robust runoff model to improve predictions for this region. In addition, the topographically based contributing areas described by source area concepts in the model can be combined with or superseded by an energy-based contributing area. The goal of this project is to design an energy-based runoff generation model to simulate characteristics influencing the aerodynamic and radiation regimes at the surface, including surface roughness, slope aspect and angle in tundra landscapes. Through the model, the frost table topography can be derived, which is a critical step toward predicting the rate and direction of flow. As most arctic tundra catchments in Canada are ungauged, understanding the impact of observed climate warming and unprecedented resource extraction activities can only be achieved through improved conceptualization of hydrological processes. Thus, an energy-based runoff generation model may lead to improved predictions of streamflow in both the present and future.

  2. Permafrost collapse after shrub removal shifts tundra ecosystem to a methane source

    NASA Astrophysics Data System (ADS)

    Nauta, Ake L.; Heijmans, Monique M. P. D.; Blok, Daan; Limpens, Juul; Elberling, Bo; Gallagher, Angela; Li, Bingxi; Petrov, Roman E.; Maximov, Trofim C.; van Huissteden, Jacobus; Berendse, Frank

    2015-01-01

    Arctic tundra ecosystems are warming almost twice as fast as the global average. Permafrost thaw and the resulting release of greenhouse gases from decomposing soil organic carbon have the potential to accelerate climate warming. In recent decades, Arctic tundra ecosystems have changed rapidly, including expansion of woody vegetation, in response to changing climate conditions. How such vegetation changes contribute to stabilization or destabilization of the permafrost is unknown. Here we present six years of field observations in a shrub removal experiment at a Siberian tundra site. Removing the shrub part of the vegetation initiated thawing of ice-rich permafrost, resulting in collapse of the originally elevated shrub patches into waterlogged depressions within five years. This thaw pond development shifted the plots from a methane sink into a methane source. The results of our field experiment demonstrate the importance of the vegetation cover for protection of the massive carbon reservoirs stored in the permafrost and illustrate the strong vulnerability of these tundra ecosystems to perturbations. If permafrost thawing can more frequently trigger such local permafrost collapse, methane-emitting wet depressions could become more abundant in the lowland tundra landscape, at the cost of permafrost-stabilizing low shrub vegetation.

  3. Changing trends in carbon dioxide exchange components in three Arctic tundra sites

    NASA Astrophysics Data System (ADS)

    Mbufong, Herbert; Lund, Magnus; Christensen, Torben; Jackowicz-Korczynski, Marcin; Parmentier, Frans-Jan; Dolman, Han; van der Molen, Michiel; Tamstorf, Mikkel

    2014-05-01

    This paper aims to investigate the interannual variability in carbon flux components in a High, Low and Sub Arctic tundra site. By identifying trends in different tundra types, we can better understand the possible future response of Arctic tundra under climatic change. The timing and length of seasons, alongside environmental controls, have been examined to assess their effect on the seasonal carbon budgets of these sites. Data was collected using the micrometeorological eddy covariance technique from three Arctic tundra sites in Greenland (74.47 °N), Siberia (70.82 °N) and Sweden (68.33 °N). We have hypothesized that the interannual trends in net ecosystem exchange (NEE) components will vary between the different tundra types in this study and will most likely be driven by temperature, vegetation characteristics (NDVI) and season phenology (start and length of seasons). Our results will present the evolution of the seasonal budgets (Thaw, pre-green, green, post-green seasons) of NEE components; and the drivers of these trends over 6 years (2003 - 2008) in these three sites. These and more will be presented at the conference.

  4. How will the tundra-taiga interface respond to climate change?

    PubMed

    Skre, Oddvar; Baxter, Robert; Crawford, Robert M M; Callaghan, Terry V; Fedorkov, Alexey

    2002-08-01

    The intuitive and logical answer to the question of how the tundra-taiga interface will react to global warming is that it should move north and this is mirrored by many models of potential treeline migration. Northward movement may be the eventual outcome if climatic warming persists over centuries or millennia. However, closer examination of the tundra-taiga interface across its circumpolar extent reveals a more complex situation. The regional climatic history of the tundra-taiga interface is highly varied, and consequently it is to be expected that the forest tundra boundary zone will respond differently to climate change depending on local variations in climate, evolutionary history, soil development, and hydrology. Investigations reveal considerable stability at present in the position of the treeline and while there may be a long-term advance northwards there are oceanic regions where climatic warming may result in a retreat southwards due to increased bog development. Reinforcing this trend is an increasing human impact, particularly in the forest tundra of Russia, which forces the limit of the forested areas southwards. Local variations will therefore require continued observation and research, as they will be of considerable importance economically as well as for ecology and conservation.

  5. Methane emissions from tundra environments in the Yukon-Kuskokwin Delta, Alaska

    NASA Technical Reports Server (NTRS)

    Bartlett, Karen B.; Crill, Patrick M.; Sass, Ronald L.; Harriss, Robert C.; Dise, Nancy B.

    1992-01-01

    This paper reports CH4 flux to the atmosphere from a variety of tundra environments near Bethel, Alaska during the summer months of 1988. Emissions from wet meadow tundra averaged 144 +/- 31 mg/sq m/d and ranged from 15.6 to 426 mg/sq m/d varying with soil moisture and temperature. Flux from the drier upland tundra was about two orders of magnitude lower and averaged 2.3 +/- 1.1 mg/sq m/d. Tundra lakes emit CH4 from the open water surface as well as from fringing aquatic vegetation; the presence of vegetation significantly enhanced flux over open water rates. Calculated diffusive fluxes from open water varied with lake size, the large lakes emitting 3.8 mg/sq m/d and small lakes emitting an average of 77 mg/sq m/d. An updated estimate of global emissions from tundra indicates an annual fluxes of approximately 11 +/- 3 Tg CH4.

  6. Allelopathy-mediated Competition in Microbial Mats from Antarctic Lakes.

    PubMed

    Slattery, Marc; Lesser, Michael P

    2017-02-18

    Microbial mats are vertically stratified communities that host a complex consortium of microorganisms, dominated by cyanobacteria, that compete for available nutrients and environmental niches, within these extreme habitats. The Antarctic Dry Valleys near McMurdo Sound include a series of lakes within the drainage basin that are bisected by glacial traverses. These lakes are traditionally independent, but recent increases in glacial melting have allowed two lakes (Chad and Hoare) to become connected by a meltwater stream. Microbial mats were collected from these lakes, and cultured under identical conditions at the McMurdo Station laboratory. Replicate pairings of the microbial mats exhibited consistent patterns of growth inhibition indicative of competitive dominance. Natural products were extracted from the microbial mats, and a disc diffusion assay was utilized to show that allelochemical compounds mediate competitive interactions. Both microscopy and 16S rRNA sequencing show that these mats contain significant populations of cyanobacteria known to produce allelochemicals. Two compounds were isolated from these microbial mats that might be important in the chemical ecology of these psychrophiles. In other disc:mat pairings, including extract versus mat of origin, the allelochemicals exhibited no effect. Taken together, these results indicate that Antarctic lake microbial mats can compete via allelopathy.

  7. Reduced Gas Cycling in Microbial Mats: Implications for Early Earth

    NASA Technical Reports Server (NTRS)

    Hoehler, Tori M.; Bebout, Brad M.; DesMarais, David J.; DeVincenzi, Donald L. (Technical Monitor)

    2000-01-01

    For more than half the history of life on Earth, biological productivity was dominated by photosynthetic microbial mats. During this time, mats served as the preeminent biological influence on earth's surface and atmospheric chemistry and also as the primary crucible for microbial evolution. We find that modern analogs of these ancient mat communities generate substantial quantities of hydrogen, carbon monoxide, and methane. Escape of these gases from the biosphere would contribute strongly to atmospheric evolution and potentially to the net oxidation of earth's surface; sequestration within the biosphere carries equally important implications for the structure, function, and evolution of anaerobic microbial communities within the context of mat biology.

  8. Bioremediation of metals, organic and mixed contaminants with microbial mats

    SciTech Connect

    Bender, J.

    1995-12-31

    Microbial mats are natural heterotrophic and autotrophic communities dominated by cyanobacteria (blue-green algae). They are self-organized laminated structures annealed tightly together by slimy secretions from various microbial components. The surface slime of the mats effectively immobilizes the ecosystem to a variety of substrates, thereby stabilizing the most efficient internal microbial structure. Cyanobacteria mats are generated for bioremediation applications by enriching a water surface with ensiled grass clippings. These constructed mats have been used to reduce selenate to elemental selenium, remove Pb, Cd, Cu, Zn, Co, Cr, Fe and Mn from water and to remove Pb from sediments of shallow laboratory ponds. Uranium, U{sup 238}, was removed from groundwater samples at the rate of 3.19 Mg/m{sup 2}/h. Degradation of recalcitrant organic contaminants by mats is relatively rapid under both dark and light conditions. The following contaminants have been degraded in water and/or soil media by constructed mats: TNT, chrysene, naphthalene, hexadecane, phenanthrene, PCB, TCE, pulp and paper mill wastes, and three pesticides: chlordane, carbofuran and paraquat. Radio-labeled experiments with mat-treated carbofuran, petroleum distillates, TNT, chlordane, PCB and TCE show that these compounds are mineralized by the constructed mats. Mats applied to mixed contaminant solutions (TCE + Zn and TNT + pb) sequestered the metal while mineralizing the TCE. Remediation rates of the organic and inorganic components were the same in mixed solution as they were in single application.

  9. Variation in bird's originating nitrogen availability limits High Arctic tundra development over last 2000 year (Hornsund, Svalbard)

    NASA Astrophysics Data System (ADS)

    Skrzypek, Grzegorz; Wojtuń, Bronisław; Hua, Quan; Richter, Dorota; Jakubas, Dariusz; Wojczulanis-Jakubas, Katarzyna; Samecka-Cymerman, Aleksandra

    2016-04-01

    Arctic and subarctic regions play important roles in the global carbon balance. However, nitrogen (N) deficiency is a major constraint for organic carbon sequestration in the High Arctic. Hence, the identification of the relative contributions from different N-sources is critical for understanding the constraints that limit tundra growth. The stable nitrogen composition of the three main N-sources and numerous plants were analyzed in ten tundra types (including those influenced by seabirds) in the Fuglebekken catchment (Hornsund, Svalbard, 77°N 15°E). The percentage of the total tundra N-pool provided by seabirds' feces (from planktivorous colonially breeding little auks Alle alle), ranged from 0-21% in Patterned-ground tundra to 100% in Ornithocoprophilous tundra. The total N-pool utilized by tundra plants in the studied catchment originated from birds (36%), atmospheric deposition (38%), and N2-fixation (26%). The results clearly show that N-pool in the tundra is significantly supplemented by nesting seabirds. Thus, if they experienced climate change induced substantial negative environmental pressure, it would adversely influence the tundra N-budget (Skrzypek et al. 2015). The growth rates and the sediment thickness (<15cm) in different tundra types varied considerably but the tundra age was similar in the whole area, <450 cal BP. The only exception was Ornithocoprophilous bird-N rich tundra with very diverse ages ranging from 235 to 2300 cal BP and thickness up to 110 cm. The growth rates for this tundra (62 cm core, 18 AMS 14C dates) were high (1.5-3.0 mm/yr) between 1568 and 1804 AD and then substantially declined for the period between 1804 and 1929 AD (0.2 mm/yr). These findings deliver an additional argument, that the organic matter accumulation is driven not only directly by climatic conditions but also by birds' contribution to the tundra N-pool. Skrzypek G, Wojtuń B, Richter D, Jakubas D, Wojczulanis-Jakubas K, Samecka-Cymerman A, 2015

  10. Identification of tundra land cover near Teshekpuk Lake, Alaska using SPOT satellite data

    USGS Publications Warehouse

    Markon, Carl J.; Derksen, Dirk V.

    1994-01-01

    Tundra vegetation in the Teshekpuk Lake area of the Alaskan Arctic Coastal Plain was mapped to assess distribution andabundance of waterfowl habitats. Three SPOT satellite scenes were acquired and registered to a 20 m Universal Transverse Mercatorgrid. Two clustering techniques were used to develop statistical parameters by which the SPOT data were spectrally classified.Amaximum likelihood algorithm that correlated spectral classes with land cover types was applied to the SPOT data. Field data were usedto assist in spectral class labeling and vegetation descriptions. Twelve cover classes were mapped. The most common type was moistsedge meadow tundra (13.5%); the least common was moss/peat shoreline (0.2%). The moss/peat shoreline type, important to moultinggeese and other waterfowl, was spectrally identified using supervised clustering techniques. All other land cover types were identifiedusing unsupervised clustering techniques. Cover classes were described, and a tundra landscape profile produced.

  11. Arctic lakes and streams as gas conduits to the atmosphere: Implications for tundra carbon budgets

    SciTech Connect

    Kling, G.W. ); Kipphut, G.W. ); Miller, M.C. )

    1991-01-01

    Arctic tundra has large amounts of stored carbon and is thought to be a sink for atmospheric carbon dioxide (CO{sub 2}) (0.1 to 0.3 petagram of carbon per year) (1 petagram = 10{sup 15} grams). But this estimate of carbon balance is only for terrestrial ecosystems. Measurements of the partial pressure of CO{sub 2} in 29 aquatic ecosystems across arctic Alaska showed that in most cases (27 of 29) CO{sub 2} was released to the atmosphere. This CO{sub 2} probably originates in terrestrial environments; erosion of particulate carbon plus ground-water transport of dissolved carbon from tundra contribute to the CO{sub 2} flux from surface waters to the atmosphere. If this mechanism is typical of that of other tundra areas, then current estimates of the arctic terrestrial sink for atmospheric CO{sub 2} may be 20 percent too high. 1 table, 2 figs., 21 refs.

  12. Controls over nutrient flow through plants and microbes in Arctic tundra. Final technical report

    SciTech Connect

    Chapin, F.S. III

    1995-01-01

    We successfully developed a series of models to explore the importance of species differences in phenologies of growth and nitrogen uptake to competitive interactions in upland tussock tundra. We developed growth models for 4 major tussock tundra species, based on observed growth rates and phenologies. We found that differences in phenology and nutrient use strategy could permit coexistence of some, but not all of the tundra plants modeled. The plant that was the best competitor, because of its rapid growth rate and superior ability to retranslocate nitrogen, may be naturally limited in its competitive ability by its tussock growth form. The mechanisms behind this limitation, and the contributions of patterns of mortality to observed production, will be explored in future modeling and experimental studies. In addition, our models point out that our understanding of the dynamics of nitrogen supply is still inadequate.

  13. Stromatolites, Metals, Statistics and Microbial Mats: A Complex Interplay

    NASA Astrophysics Data System (ADS)

    Spear, J. R.

    2014-12-01

    Initially thought to be relatively 'simple' ecosystems for study, microbial mats have long been considered ideal for any number of research questions. Microbial mats can be found in any number of environments, both natural and manmade, and are typically dependent upon the physiochemical environment for their structure, maintenance and longevity. Ultimately, these and other parameters govern community whereby a microbial mat provides overall ecosystem services to their environment. On the edge of a hotspring in Yellowstone National Park we have found an active microbial mat community that can form a laminated, lithified, accretionary structure that is likely the best example of a living and growing stromatolite. In the outfall channel of the sulfidic Stinking Spring, Utah, we have found examples of both naturally occurring laminated and floating mats where the carbon flux is controlled by abiotic degassing of CO2 rather than metabolism. δ13C-bicarbonate uptake experiments reveal an autotrophic growth rate of 0 - 0.16%/day while δ13C-acetate reveals a higher heterotrophic growth rate of 0.03 - 0.65%/day, which highlights the role of heterotrophs in these mats. Similar growth experiments on Little Hot Creek, California laminated microbial mats reveal a trend for top-down microbial growth with similar microbial taxonomy and diversity to other mat-types. Of a curious note is that incubation experiments with Little Hot Creek mats reveals the importance of particular metals in mat structure and function. Statistically, alpha- and beta-diversity metrics are often used to characterize microbial communities in such systems, but from an analysis of a wastewater treatment system, Hill diversities can better interpret the effective number of species to produce an ecologically intuitive quantity to better understand a microbial mat ecosystem.

  14. Potential Arctic tundra vegetation shifts in response to changing temperature, precipitation and permafrost thaw

    NASA Astrophysics Data System (ADS)

    van der Kolk, Henk-Jan; Heijmans, Monique M. P. D.; van Huissteden, Jacobus; Pullens, Jeroen W. M.; Berendse, Frank

    2016-11-01

    Over the past decades, vegetation and climate have changed significantly in the Arctic. Deciduous shrub cover is often assumed to expand in tundra landscapes, but more frequent abrupt permafrost thaw resulting in formation of thaw ponds could lead to vegetation shifts towards graminoid-dominated wetland. Which factors drive vegetation changes in the tundra ecosystem are still not sufficiently clear. In this study, the dynamic tundra vegetation model, NUCOM-tundra (NUtrient and COMpetition), was used to evaluate the consequences of climate change scenarios of warming and increasing precipitation for future tundra vegetation change. The model includes three plant functional types (moss, graminoids and shrubs), carbon and nitrogen cycling, water and permafrost dynamics and a simple thaw pond module. Climate scenario simulations were performed for 16 combinations of temperature and precipitation increases in five vegetation types representing a gradient from dry shrub-dominated to moist mixed and wet graminoid-dominated sites. Vegetation composition dynamics in currently mixed vegetation sites were dependent on both temperature and precipitation changes, with warming favouring shrub dominance and increased precipitation favouring graminoid abundance. Climate change simulations based on greenhouse gas emission scenarios in which temperature and precipitation increases were combined showed increases in biomass of both graminoids and shrubs, with graminoids increasing in abundance. The simulations suggest that shrub growth can be limited by very wet soil conditions and low nutrient supply, whereas graminoids have the advantage of being able to grow in a wide range of soil moisture conditions and have access to nutrients in deeper soil layers. Abrupt permafrost thaw initiating thaw pond formation led to complete domination of graminoids. However, due to increased drainage, shrubs could profit from such changes in adjacent areas. Both climate and thaw pond formation

  15. Reduced postfire tree regeneration along a boreal forest-forest-tundra transect in northern Quebec

    SciTech Connect

    Sirois, L.; Payette, S. )

    1991-04-01

    The large 1950s fires that burned > 5,500 km{sup 2} of land across a south-to-north climatic gradient in northern Quebec provide an opportunity to evaluate the role of fire in forest-tundra development on a demographic basis. The tree population density before and {approx} 30 yr after fire was estimated by censusing trees in plots of 400 m{sup 2} located in upland and lowland within four representative ecoregions of northern Quebec. The analysis of tree recruitment before and after fire, in 410 randomly selected sites along a transect crossing the upper boreal forest and forest-tundra zones, indicated that wildfires induced substantial depletion of tree populations. Taken as a whole, fires have significantly reduced the density of black spruce populations in forest-tundra uplands, but not in the lowlands. Sustained reduction of tree population density after several destructive fires appears as one of the main deforestation processed in the subarctic zone. This leads to the patchy distribution of forest stands and scattered tree populations typical of the forest-tundra biome. Comparisons with paleoecological data suggest that the impact of the 1950s fires contributed to the expansion of the forest tundra into the upper boreal forest. The ecological impact of these fires was probably similar to those fires responsible for development of the forest tundra during the Holocene. It is suggested that the fire-climate interaction should be considered in order to predict the ecological impact of warming climate on high-latitude forest ecosystems.

  16. Effects of temperature seasonality on tundra vegetation productivity using a daily vegetation dynamics model

    NASA Astrophysics Data System (ADS)

    Epstein, H. E.; Erler, A.; Frazier, J.; Bhatt, U. S.

    2011-12-01

    Changes in the seasonality of air temperature will elicit interacting effects on the dynamics of snow cover, nutrient availability, vegetation growth, and other ecosystem properties and processes in arctic tundra. Simulation models often do not have the fine temporal resolution necessary to develop theory and propose hypotheses for the effects of daily and weekly timescale changes on ecosystem dynamics. We therefore developed a daily version of an arctic tundra vegetation dynamics model (ArcVeg) to simulate how changes in the seasonality of air temperatures influences the dynamics of vegetation growth and carbon sequestration across regions of arctic tundra. High temporal-resolution air and soil temperature data collected from field sites across the five arctic tundra bioclimate subzones were used to develop a daily weather generator operable for sites throughout the arctic tundra. Empirical relationships between temperature and soil nitrogen were used to generate daily dynamics of soil nitrogen availability, which drive the daily uptake of nitrogen and growth among twelve tundra plant functional types. Seasonal dynamics of the remotely sensed normalized difference vegetation index (NDVI) and remotely sensed land surface temperature from the Advanced Very High Resolution Radiometer (AVHRR) GIMMS 3g dataset were used to investigate constraints on the start of the growing season, although there was no indication of any spatially consistent temperature or day-length controls on greening onset. Because of the exponential nature of the relationship between soil temperature and nitrogen mineralization, temperature changes during the peak of the growing season had greater effects on vegetation productivity than changes earlier in the growing season. However, early season changes in temperature had a greater effect on the relative productivities of different plant functional types, with potential influences on species composition.

  17. Modeling the spatiotemporal variability in subsurface thermal regimes across a low-relief polygonal tundra landscape

    NASA Astrophysics Data System (ADS)

    Kumar, Jitendra; Collier, Nathan; Bisht, Gautam; Mills, Richard T.; Thornton, Peter E.; Iversen, Colleen M.; Romanovsky, Vladimir

    2016-09-01

    Vast carbon stocks stored in permafrost soils of Arctic tundra are under risk of release to the atmosphere under warming climate scenarios. Ice-wedge polygons in the low-gradient polygonal tundra create a complex mosaic of microtopographic features. This microtopography plays a critical role in regulating the fine-scale variability in thermal and hydrological regimes in the polygonal tundra landscape underlain by continuous permafrost. Modeling of thermal regimes of this sensitive ecosystem is essential for understanding the landscape behavior under the current as well as changing climate. We present here an end-to-end effort for high-resolution numerical modeling of thermal hydrology at real-world field sites, utilizing the best available data to characterize and parameterize the models. We develop approaches to model the thermal hydrology of polygonal tundra and apply them at four study sites near Barrow, Alaska, spanning across low to transitional to high-centered polygons, representing a broad polygonal tundra landscape. A multiphase subsurface thermal hydrology model (PFLOTRAN) was developed and applied to study the thermal regimes at four sites. Using a high-resolution lidar digital elevation model (DEM), microtopographic features of the landscape were characterized and represented in the high-resolution model mesh. The best available soil data from field observations and literature were utilized to represent the complex heterogeneous subsurface in the numerical model. Simulation results demonstrate the ability of the developed modeling approach to capture - without recourse to model calibration - several aspects of the complex thermal regimes across the sites, and provide insights into the critical role of polygonal tundra microtopography in regulating the thermal dynamics of the carbon-rich permafrost soils. Areas of significant disagreement between model results and observations highlight the importance of field-based observations of soil thermal and

  18. Shrub Abundance Mapping in Arctic Tundra with Misr

    NASA Astrophysics Data System (ADS)

    Duchesne, R.; Chopping, M. J.; Wang, Z.; Schaaf, C.; Tape, K. D.

    2013-12-01

    Over the last 60 years an increase in shrub abundance has been observed in the Arctic tundra in connection with a rapid surface warming trend. Rapid shrub expansion may have consequences in terms of ecosystem structure and function, albedo, and feedbacks to climate; however, its rate is not yet known. The goal of this research effort is thus to map large scale changes in Arctic tundra vegetation by exploiting the structural signal in moderate resolution satellite remote sensing images from NASA's Multiangle Imaging SpectroRadiometer (MISR), mapped onto a 250m Albers Conic Equal Area grid. We present here large area shrub mapping supported by reference data collated using extensive field inventory data and high resolution panchromatic imagery. MISR Level 1B2 Terrain radiance scenes from the Terra satellite from 15 June-31 July, 2000 - 2010 were converted to surface bidirectional reflectance factors (BRF) using MISR Toolkit routines and the MISR 1 km LAND product BRFs. The red band data in all available cameras were used to invert the RossThick-LiSparse-Reciprocal BRDF model to retrieve kernel weights, model-fitting RMSE, and Weights of Determination. The reference database was constructed using aerial survey, three field campaigns (field inventory for shrub count, cover, mean radius and height), and high resolution imagery. Tall shrub number, mean crown radius, cover, and mean height estimates were obtained from QuickBird and GeoEye panchromatic image chips using the CANAPI algorithm, and calibrated using field-based estimates, thus extending the database to over eight hundred locations. Tall shrub fractional cover maps for the North Slope of Alaska were constructed using the bootstrap forest machine learning algorithm that exploits the surface information provided by MISR. The reference database was divided into two datasets for training and validation. The model derived used a set of 19 independent variables(the three kernel weights, ratios and interaction terms

  19. Persistence of high lead concentrations and associated effects in Tundra Swans captured near a mining and smelting complex in northern Idaho

    USGS Publications Warehouse

    Blus, L.J.; Henny, C.J.; Hoffman, D.J.; Sileo, L.; Audet, D.J.

    1999-01-01

    Lead poisoning of waterfowl, particularly tundra swans (Cygnus columbianus), has been documented in the Coeur d'Alene River Basin in northern Idaho for nearly a century. Over 90% of the lead-poisoned tundra swans in this area that were necropsied have no ingested lead shot. Spent lead shot from hunting activities over the years is therefore a minor source of lead in these swans. The migrating swans accumulated lethal burdens of lead from ingestion of sediments and aquatic vegetation during a short stopover in the spring. The lead originated from mining and smelting activities. Lead concentrations and physiological characteristics of blood were compared in swans captured in swim-in traps, with moribund swans caught by hand in the lead-contaminated area in 1987 and 1994-1995 and with birds captured by night-lighting in reference areas in 1994-1995. Blood lead concentrations in swans were highest in moribund birds (3.3 ?g g-1 in 1987 and 1995), intermediate in those trapped in the contaminated area (0.82 ?g g-1 in 1987 and 1.8 ?g g-1 in 1995), and lowest (0.11 ?g g-1) in those trapped in the reference areas. daminolevulinic acid dehydratase (ALAD) was significantly inhibited in swans from the contaminated area. Hematocrit and hemoglobin were significantly depressed only in moribund swans. Of the 19 swans found moribund and euthanized, 18 were classified as having lead toxicosis on the basis of lead levels in blood (1.3 to 9.6 ?g g-1) and livers (6 to 40 ?g g-1) and necropsy findings. The 19th swan had aspergillosis. There was no evidence that effects of lead on tundra swans had diminished from 1987 to 1995.

  20. Fire disturbance effects on land surface albedo in Alaskan tundra

    NASA Astrophysics Data System (ADS)

    French, Nancy H. F.; Whitley, Matthew A.; Jenkins, Liza K.

    2016-03-01

    The study uses satellite Moderate Resolution Imaging Spectroradiometer albedo products (MCD43A3) to assess changes in albedo at two sites in the treeless tundra region of Alaska, both within the foothills region of the Brooks Range, the 2007 Anaktuvuk River Fire (ARF) and 2012 Kucher Creek Fire (KCF). Results are compared to each other and other studies to assess the magnitude of albedo change and the longevity of impact of fire on land surface albedo. In both sites there was a marked decrease of albedo in the year following the fire. In the ARF, albedo slowly increased until 4 years after the fire, when it returned to albedo values prior to the fire. For the year immediately after the fire, a threefold difference in the shortwave albedo decrease was found between the two sites. ARF showed a 45.3% decrease, while the KCF showed a 14.1% decrease in shortwave albedo, and albedo is more variable in the KCF site than ARF site 1 year after the fire. These differences are possibly the result of differences in burn severity of the two fires, wherein the ARF burned more completely with more contiguous patches of complete burn than KCF. The impact of fire on average growing season (April-September) surface shortwave forcing in the year following fire is estimated to be 13.24 ± 6.52 W m-2 at the ARF site, a forcing comparable to studies in other treeless ecosystems. Comparison to boreal studies and the implications to energy flux are discussed in the context of future increases in fire occurrence and severity in a warming climate.

  1. Dimethyl sulphide and methanethiol formation in microbial mats: potential pathways for biogenic signatures.

    PubMed

    Visscher, Pieter T; Baumgartner, Laura K; Buckley, Daniel H; Rogers, Daniel R; Hogan, Mary E; Raleigh, Christopher D; Turk, Kendra A; Des Marais, David J

    2003-04-01

    Mechanisms of dimethyl sulphide (DMS) and methanethiol (MT) production and consumption were determined in moderately hypersaline mats, Guerrero Negro, Mexico. Biological pathways regulated the net flux of DMS and MT as revealed by increases in flux resulting from decreased salinity, increased temperature and the removal of oxygen. Dimethylsulphoniopropionate (DMSP) was not present in these microbial mats and DMS and MT are probably formed by the reaction of photosynthetically produced low-molecular weight organic carbon and biogenic hydrogen sulphide derived from sulphate reduction. These observations provide an alternative to the notion that DMSP or S-containing amino acids are the dominant precursors of DMS in intertidal sediment systems. The major sink for DMS in the microbial mats was biological consumption, whereas photochemical oxidation to dimethylsulphoxide was the major sink for DMS in the overlying water column. Diel flux measurements demonstrated that significantly more DMS is released from the system during the night than during the day. The major consumers of DMS in the presence of oxygen were monooxygenase-utilizing bacteria, whereas under anoxic conditions, DMS was predominantly consumed by sulphate-reducing bacteria and methanethiol was consumed by methanogenic bacteria. Aerobic and anaerobic consumption rates of DMS were nearly identical. Mass balance estimates suggest that the consumption in the water column is likely to be smaller than net the flux from the mats. Volatile organic sulphur compounds are thus indicators of high rates of carbon fixation and sulphate reduction in these laminated sediment ecosystems, and atmospheric sulphur can be generated as a biogenic signature of the microbial mat community.

  2. Use of palm-mat geotextiles for rainsplash erosion control

    NASA Astrophysics Data System (ADS)

    Bhattacharyya, R.; Fullen, M. A.; Davies, K.; Booth, C. A.

    2010-07-01

    Soil detachment by raindrop action (rainsplash erosion) is a very important subprocess of erosion by water. It is a particular problem in the UK as most soils are sandy or loamy sand in texture and lands have gentle to medium slope. However, few studies report potential rainsplash erosion control options under field conditions. Hence, the utilization of palm-mat geotextiles as a rainsplash erosion control technique was investigated at Hilton, east Shropshire, U.K. (52°33'5.7″ N, 2°19'18.3″ W). Geotextile-mats constructed from Borassus aethiopum (Borassus palm of West Africa) and Mauritia flexuosa (Buriti palm of South America) leaves are termed Borassus mats and Buriti mats, respectively. Two-year field experiments were conducted at Hilton to study the effects of emplacing Borassus and Buriti mats on rainsplash erosion of a loamy sand soil. Two sets (12 plots each) of experiments were established to study the effects of these mats on splash height and splash erosion. Splash height needs to be known to assess the transport mechanism of major soil fraction and its constituents on sloping land by rainsplash. In both sets, six randomly-selected plots were covered with mats, and the rest were bare. Results (during 22/01/2007‒23/01/2009; total precipitation = 1731.5 mm) show that Borassus mat-covered plots had ˜ 89% ( P < 0.001) less total splash erosion (2.97 kg m - 2 ) than bare plots (27.02 kg m - 2 ). Comparatively, mean splash height from Borassus mat-covered plots (0.12 m) was significantly ( P < 0.001) less than the bare plots, by ˜ 54%. However, Buriti mat-cover on bare plots had no significant ( P > 0.05) effect in rainsplash erosion control during that period, although plots with Buriti mats significantly ( P < 0.05) decreased splash height (by ˜ 18%) compared with bare plots (0.26 m). Buriti mats, probably due to their ˜ 43, 62 and 50% lower cover percentage (44%), mass per unit area (413 g - 2 ) and thickness (10 mm), respectively, compared with

  3. Metagenomics Reveals Pervasive Bacterial Populations and Reduced Community Diversity across the Alaska Tundra Ecosystem

    PubMed Central

    Johnston, Eric R.; Rodriguez-R, Luis M.; Luo, Chengwei; Yuan, Mengting M.; Wu, Liyou; He, Zhili; Schuur, Edward A. G.; Luo, Yiqi; Tiedje, James M.; Zhou, Jizhong; Konstantinidis, Konstantinos T.

    2016-01-01

    How soil microbial communities contrast with respect to taxonomic and functional composition within and between ecosystems remains an unresolved question that is central to predicting how global anthropogenic change will affect soil functioning and services. In particular, it remains unclear how small-scale observations of soil communities based on the typical volume sampled (1–2 g) are generalizable to ecosystem-scale responses and processes. This is especially relevant for remote, northern latitude soils, which are challenging to sample and are also thought to be more vulnerable to climate change compared to temperate soils. Here, we employed well-replicated shotgun metagenome and 16S rRNA gene amplicon sequencing to characterize community composition and metabolic potential in Alaskan tundra soils, combining our own datasets with those publically available from distant tundra and temperate grassland and agriculture habitats. We found that the abundance of many taxa and metabolic functions differed substantially between tundra soil metagenomes relative to those from temperate soils, and that a high degree of OTU-sharing exists between tundra locations. Tundra soils were an order of magnitude less complex than their temperate counterparts, allowing for near-complete coverage of microbial community richness (~92% breadth) by sequencing, and the recovery of 27 high-quality, almost complete (>80% completeness) population bins. These population bins, collectively, made up to ~10% of the metagenomic datasets, and represented diverse taxonomic groups and metabolic lifestyles tuned toward sulfur cycling, hydrogen metabolism, methanotrophy, and organic matter oxidation. Several population bins, including members of Acidobacteria, Actinobacteria, and Proteobacteria, were also present in geographically distant (~100–530 km apart) tundra habitats (full genome representation and up to 99.6% genome-derived average nucleotide identity). Collectively, our results revealed

  4. Response of tundra ecosystems to elevated atmospheric carbon dioxide: Final report

    SciTech Connect

    Oechel, W.C.

    1986-01-01

    This report includes: a detailed description of the system which we have developed for providing control of CO/sub 2/ and temperature; the effects of this treatment on ecosystem fluxes of CO/sub 2/ at ecosystem; the effects of three years CO/sub 2/ enrichment on the photosynthetic response of important tundra species; effects of mineral nutrition and CO/sub 2/ enrichment on growth, photosynthesis, and biomass partitioning of tundra species; and the effects of CO/sub 2/ on soil respiration.

  5. Luteolibacter luojiensis sp. nov., isolated from Arctic tundra soil, and emended description of the genus Luteolibacter.

    PubMed

    Jiang, Fan; Li, Wenjuan; Xiao, Mengchen; Dai, Jun; Kan, Wenjing; Chen, Lu; Li, Wenxin; Fang, Chengxiang; Peng, Fang

    2012-09-01

    A yellow-pigmented, Gram-reaction-negative, non-motile, aerobic bacterium, designated DR4-30(T), was isolated from tundra soil near Ny-Ålesund, Svalbard Archipelago, Norway (78° 58' N 12° 03' E). Growth occurred at 4-28 °C (optimum 20-25 °C) and at pH 7-8 (optimum pH 7). Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain DR4-30(T) belongs to the genus Luteolibacter in the family Verrucomicrobiaceae. The 16S rRNA gene sequence of this strain showed 95.4 and 94.7 % sequence similarity to those of Luteolibacter pohnpeiensis A4T-83(T) and Luteolibacter algae A5J-41-2(T), respectively. The major respiratory quinones were MK-9 and MK-10; the predominant cellular fatty acids were summed feature 3 (C(16 : 1)ω7c and/or C(16 : 1)ω6c; 20.7 %), iso-C(14 : 0) (20.3 %), C(17 : 0) (10.7 %), C(16 : 0) (8.0 %) and C(14 : 0) (6.6 %). The DNA G+C content was 57.3 mol%. On the basis of phenotypic, chemotaxonomic and phylogenetic data, strain DR4-30(T) represents a novel species of the genus Luteolibacter, for which the name Luteolibacter luojiensis sp. nov. is proposed. The type strain is DR4-30(T) (= CCTCC AB 2010415(T) = NRRL B-59669(T)). An emended description of the genus Luteolibacter is also provided.

  6. 30 CFR 77.513 - Insulating mats at power switches.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 30 Mineral Resources 1 2012-07-01 2012-07-01 false Insulating mats at power switches. 77.513... COAL MINES Electrical Equipment-General § 77.513 Insulating mats at power switches. Dry wooden... switchboards and power-control switches where shock hazards exist. However, metal plates on which a...

  7. 30 CFR 77.513 - Insulating mats at power switches.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 30 Mineral Resources 1 2013-07-01 2013-07-01 false Insulating mats at power switches. 77.513... COAL MINES Electrical Equipment-General § 77.513 Insulating mats at power switches. Dry wooden... switchboards and power-control switches where shock hazards exist. However, metal plates on which a...

  8. 30 CFR 77.513 - Insulating mats at power switches.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 30 Mineral Resources 1 2014-07-01 2014-07-01 false Insulating mats at power switches. 77.513... COAL MINES Electrical Equipment-General § 77.513 Insulating mats at power switches. Dry wooden... switchboards and power-control switches where shock hazards exist. However, metal plates on which a...

  9. Compositions and method of use of constructed microbial mats

    DOEpatents

    Bender, Judith A.; Phillips, Peter C.

    1997-01-01

    Compositions and methods of use of constructed microbial mats, comprising cyanobacteria and purple autotrophic bacteria and an organic nutrient source, in a laminated structure, are described. The constructed microbial mat is used for bioremediation of different individual contaminants and for mixed or multiple contaminants, and for production of beneficial compositions and molecules.

  10. Effects of preprocessing method on TVOC emission of car mat

    NASA Astrophysics Data System (ADS)

    Wang, Min; Jia, Li

    2013-02-01

    The effects of the mat preprocessing method on total volatile organic compounds (TVOC) emission of car mat are studied in this paper. An appropriate TVOC emission period for car mat is suggested. The emission factors for total volatile organic compounds from three kinds of new car mats are discussed. The car mats are preprocessed by washing, baking and ventilation. When car mats are preprocessed by washing, the TVOC emission for all samples tested are lower than that preprocessed in other methods. The TVOC emission is in stable situation for a minimum of 4 days. The TVOC emitted from some samples may exceed 2500μg/kg. But the TVOC emitted from washed Polyamide (PA) and wool mat is less than 2500μg/kg. The emission factors of total volatile organic compounds (TVOC) are experimentally investigated in the case of different preprocessing methods. The air temperature in environment chamber and the water temperature for washing are important factors influencing on emission of car mats.

  11. MAT@USC Candidates and Latino English Language Learners

    ERIC Educational Resources Information Center

    Lomeli, Cynthia Leticia

    2012-01-01

    The purpose of this study was to further understand the perceptions of MAT@USC teacher candidates and how their perceptions and previous experiences affect the educational experiences of Latino English language learners. Three questions were developed to guide this study: (1) What are the perceptions of MAT@USC candidates in selected courses…

  12. 30 CFR 77.513 - Insulating mats at power switches.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 30 Mineral Resources 1 2010-07-01 2010-07-01 false Insulating mats at power switches. 77.513... COAL MINES Electrical Equipment-General § 77.513 Insulating mats at power switches. Dry wooden... switchboards and power-control switches where shock hazards exist. However, metal plates on which a...

  13. 30 CFR 77.513 - Insulating mats at power switches.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 30 Mineral Resources 1 2011-07-01 2011-07-01 false Insulating mats at power switches. 77.513... COAL MINES Electrical Equipment-General § 77.513 Insulating mats at power switches. Dry wooden... switchboards and power-control switches where shock hazards exist. However, metal plates on which a...

  14. Role of microbial mats in the fossilization of soft tissues

    NASA Astrophysics Data System (ADS)

    Wilby, Philip R.; Briggs, Derek E. G.; Bernier, Paul; Gaillard, Christian

    1996-09-01

    It has been speculated that microbial mats are an important agent in the fossilization of soft tissues, particularly when apatite (Ca5[CO3, PO4]3[OH, F]) is involved. This has been tested by chemical analyses of the Jurassic limestones of Cerin, France, where phosphatized soft tissues are abundant and are associated with unequivocal microbial mats. The sedimentary distribution of P, K, and Fe following deposition was controlled by the presence of the mats. P concentrations in the mats may approach 2.5 times those elsewhere in the sediment. The highest P concentrations correlate with the occurrence of phosphatized soft tissues. This is the first analytical evidence to demonstrate a fundamental role for microbial mats in the preservation of soft-bodied fossils.

  15. Research on Bayes matting algorithm based on Gaussian mixture model

    NASA Astrophysics Data System (ADS)

    Quan, Wei; Jiang, Shan; Han, Cheng; Zhang, Chao; Jiang, Zhengang

    2015-12-01

    The digital matting problem is a classical problem of imaging. It aims at separating non-rectangular foreground objects from a background image, and compositing with a new background image. Accurate matting determines the quality of the compositing image. A Bayesian matting Algorithm Based on Gaussian Mixture Model is proposed to solve this matting problem. Firstly, the traditional Bayesian framework is improved by introducing Gaussian mixture model. Then, a weighting factor is added in order to suppress the noises of the compositing images. Finally, the effect is further improved by regulating the user's input. This algorithm is applied to matting jobs of classical images. The results are compared to the traditional Bayesian method. It is shown that our algorithm has better performance in detail such as hair. Our algorithm eliminates the noise well. And it is very effectively in dealing with the kind of work, such as interested objects with intricate boundaries.

  16. Dynamic heat and moisture transfer in bulky PAN nanofiber mats

    NASA Astrophysics Data System (ADS)

    Borhani, Sedigheh; Etemad, Seyed Gholamreza; Ravandi, Seyed Abdolkarim Hosseini

    2011-07-01

    In this study a non-conventional electrospinning technique was designed for the production of high bulky polyacrylonitrile (PAN) nanofiber mats. Optimum nanofiber mats are achieved with 15 wt.% solution of PAN in dimethylformamide. Such mats result in a bulk porosity which is as high as 99.9 and a density as low as 0.84 × 10-3 g/cm3. The effect of the porosity of nanofiber mats on the air permeability and coupled heat and moisture transfer of fibers was investigated. Based on the results, high bulky nanofiber mats possess high heat and moisture transfer. Experimental data reveal that upon a slight decrease in the bulk porosity, air permeability and heat transfer decrease noticeably, while moisture transfer variation is low.

  17. Elastic-plastic behavior of non-woven fibrous mats

    NASA Astrophysics Data System (ADS)

    Silberstein, Meredith N.; Pai, Chia-Ling; Rutledge, Gregory C.; Boyce, Mary C.

    2012-02-01

    Electrospinning is a novel method for creating non-woven polymer mats that have high surface area and high porosity. These attributes make them ideal candidates for multifunctional composites. Understanding the mechanical properties as a function of fiber properties and mat microstructure can aid in designing these composites. Further, a constitutive model which captures the membrane stress-strain behavior as a function of fiber properties and the geometry of the fibrous network would be a powerful design tool. Here, mats electrospun from amorphous polyamide are used as a model system. The elastic-plastic behavior of single fibers are obtained in tensile tests. Uniaxial monotonic and cyclic tensile tests are conducted on non-woven mats. The mat exhibits elastic-plastic stress-strain behavior. The transverse strain behavior provides important complementary data, showing a negligible initial Poisson's ratio followed by a transverse:axial strain ratio greater than -1:1 after an axial strain of 0.02. A triangulated framework has been developed to emulate the fibrous network structure of the mat. The micromechanically based model incorporates the elastic-plastic behavior of single fibers into a macroscopic membrane model of the mat. This representative volume element based model is shown to capture the uniaxial elastic-plastic response of the mat under monotonic and cyclic loading. The initial modulus and yield stress of the mat are governed by the fiber properties, the network geometry, and the network density. The transverse strain behavior is linked to discrete deformation mechanisms of the fibrous mat structure including fiber alignment, fiber bending, and network consolidation. The model is further validated in comparison to experiments under different constrained axial loading conditions and found to capture the constraint effect on stiffness, yield, post-yield hardening, and post-yield transverse strain behavior. Due to the direct connection between

  18. Benthic Marine Cyanobacterial Mat Ecosystems: Biogeochemistry and Biomarkers

    NASA Technical Reports Server (NTRS)

    DesMarais, David J.; DeVincenzi, Donald (Technical Monitor)

    2001-01-01

    Cyanobacterial mats are complete ecosystems that can include processes of primary production, diagenesis and lithification. Light sustains oxygenic photosynthesis, which in turn provides energy, organic matter and oxygen to the community. Due to both absorption and scattering phenomena, incident light is transformed with depth in the mat, both in intensity and spectral composition. Mobile photo synthesizers optimize their position with respect to this light gradient. When photosynthesis ceases at night, the upper layers of the mat become reduced and sulfidic. Counteracting gradients of oxygen and sulfide combine to provide daily-contrasting environments separated on a scale of a few mm. The functional complexity of mats, coupled with the highly proximal and ordered spatial arrangement of biota, offers the potential for a staggering number of interactions. At a minimum, the products of each functional group of microorganisms affect the other groups both positively and negatively. For example, cyanobacteria generate organic matter (potential substrates) but also oxygen (a toxin for many anaerobes). Anaerobic activity recycles nutrients to the photosynthesizers but also generates potentially toxic sulfide. The combination of benefits and hazards of light, oxygen and sulfide promotes the allocation of the various essential mat processes between light and dark periods, and to various depths in the mat. Observations of mats have produced numerous surprises. For example, obligately anaerobic processes can occur in the presence of abundant oxygen, highly reduced gases are produced in the presence of abundant sulfate, meiofauna thrive at high sulfide concentrations, and the mats' constituent populations respond to environmental changes in complex ways. While photosynthetic bacteria dominate the biomass and productivity of the mat, nonphotosynthetic, anaerobic processes constitute the ultimate biological filter on the ecosystem's emergent biosignatures, including those

  19. Deeper winter snow reduces ecosystem C losses but increases the global warming potential of Arctic tussock tundra over the growing season.

    NASA Astrophysics Data System (ADS)

    Blanc-Betes, E.; Welker, J. M.; Gomez-Casanovas, N.; Gonzalez-Meler, M. A.

    2015-12-01

    Arctic winter precipitation is projected to increase globally over the next decades, spatial variability encompassing areas with increases and decreases in winter snow. Changes in winter precipitation strongly affect C dynamics in Arctic systems and may lead to major positive climate forcing feedbacks. However, impacts of predicted changes in snowfall and accumulation on the rate and form of C fluxes (CO2 and CH4) and associated forcing feedbacks from Arctic tundra remain uncertain. We investigated how changes in winter precipitation affect net ecosystem CO2 and CH4 fluxes and budgets of moist acidic tundra in an 18-yrs snow fence experiment over a complete growing season at Toolik Lake, AK. Arctic tundra under ambient winter precipitation (CTL) was a net source of CO2 and CH4, yielding net C losses over the growing season. Reduced snow (-15-30% snow depth; RS) switched the system to a net CO2 sink mostly by limiting SOC decomposition within colder soils. Snow additions progressively reduced net ecosystem CO2 losses compared to CTL, switching the system into a weaker net CO2 source with medium additions (+20-45% snow depth; MS) and into a small net CO2 sink with high additions (+70-100% snow depth; HS). Increasingly wetter soils with snow additions constrained the temperature sensitivity of aerobic decomposition and favored the anaerobic metabolism, buffering ecosystem CO2 losses despite substantial soil warming. Accordingly, Arctic tundra switched from a sustained CH4 sink at RS site to an increasingly stronger CH4 source with snow additions. Accounting for both CO2 and CH4, the RS site became a net C sink over the growing season, overall reducing the global warming potential (CO2 equiv.; GWP) of the system relative to CTL. Snow additions progressively reduced net C losses at the MS site compared to CTL and the system transitioned into a net C sink at HS plots, partly due to the slower metabolism of anaerobic decomposition. However, given the greater radiative

  20. Algal Species and Light Microenvironment in a Low-pH, Geothermal Microbial Mat Community

    PubMed Central

    Ferris, M. J.; Sheehan, K. B.; Kühl, M.; Cooksey, K.; Wigglesworth-Cooksey, B.; Harvey, R.; Henson, J. M.

    2005-01-01

    Unicellular algae are the predominant microbial mat-forming phototrophs in the extreme environments of acidic geothermal springs. The ecology of these algae is not well known because concepts of species composition are inferred from cultivated isolates and microscopic observations, methods known to provide incomplete and inaccurate assessments of species in situ. We used sequence analysis of 18S rRNA genes PCR amplified from mat samples from different seasons and different temperatures along a thermal gradient to identify algae in an often-studied acidic (pH 2.7) geothermal creek in Yellowstone National Park. Fiber-optic microprobes were used to show that light for algal photosynthesis is attenuated to <1% over the 1-mm surface interval of the mat. Three algal sequences were detected, and each was present year-round. A Cyanidioschyzon merolae sequence was predominant at temperatures of ≥49°C. A Chlorella protothecoides var. acidicola sequence and a Paradoxia multisita-like sequence were predominant at temperatures of ≤39°C. PMID:16269755

  1. Algal species and light microenvironment in a low-pH, geothermal microbial mat community.

    PubMed

    Ferris, M J; Sheehan, K B; Kühl, M; Cooksey, K; Wigglesworth-Cooksey, B; Harvey, R; Henson, J M

    2005-11-01

    Unicellular algae are the predominant microbial mat-forming phototrophs in the extreme environments of acidic geothermal springs. The ecology of these algae is not well known because concepts of species composition are inferred from cultivated isolates and microscopic observations, methods known to provide incomplete and inaccurate assessments of species in situ. We used sequence analysis of 18S rRNA genes PCR amplified from mat samples from different seasons and different temperatures along a thermal gradient to identify algae in an often-studied acidic (pH 2.7) geothermal creek in Yellowstone National Park. Fiber-optic microprobes were used to show that light for algal photosynthesis is attenuated to < 1% over the 1-mm surface interval of the mat. Three algal sequences were detected, and each was present year-round. A Cyanidioschyzon merolae sequence was predominant at temperatures of > or = 49 degrees C. A Chlorella protothecoides var. acidicola sequence and a Paradoxia multisita-like sequence were predominant at temperatures of < or = 39 degrees C.

  2. Pressure influence on the structural characteristics of modified absorptive glass mat separators: A standard contact porosimetry study

    NASA Astrophysics Data System (ADS)

    Burashnikova, M. M.; Khramkova, T. S.; Kazarinov, I. A.; Shmakov, S. L.

    2015-09-01

    The article presents a comparative analysis of the structural characteristics of absorptive glass mats manufactured by "Hollingsworth & Vose" (a 2.8 mm thickness) and "Bernard Dumas" (a 3.0 mm thickness) modified by impregnation with polymeric emulsions based on polyvinylidene fluoride, a polyvinylpyrrolidone styrene copolymer, and polytetrafluoroethylene, by means of standard contact porosimetry. The key study is influence of features of the porous structure on the compression properties, the rate of wicking, and the oxygen cycle efficiency in lead-acid battery mock-ups under several plate-group compression pressures. It is found that the treatment of the absorptive glass mat separators with polymeric emulsions leads to redistribution of their pores by size. An increased pressure in the electrode unit insignificantly changes the pore structure of the modified absorptive glass mat separators, and the oxygen cycle efficiency rises in comparison with unmodified separators.

  3. Potential changes in arctic seasonality and plant communities may impact tundra soil chemistry and carbon dynamics

    NASA Astrophysics Data System (ADS)

    Crow, S.; Cooper, E.; Beilman, D.; Filley, T.; Reimer, P.

    2009-04-01

    On the Svalbard archipelago, as in other high Arctic regions, tundra soil organic matter (SOM) is primarily plant detritus that is largely stabilized by cold, moist conditions and low nitrogen availability. However, the resistance of SOM to decomposition is also influenced by the quality of organic matter inputs to soil. Different plant communities are likely to give different qualities to SOM, especially where lignin-rich woody species encroach into otherwise graminoid and bryophyte-dominated regions. Arctic woody plant species are particularly sensitive to changes in temperature, snow cover, and growing season length. In a changing environment, litter chemistry may emerge as an important control on tundra SOM stabilization. In summer 2007, we collected plant material and soil from the highly-organic upper horizon (appx. 0-5 cm) and the mineral-dominated lower horizon (appx. 5-10cm) from four locations in the southwest facing valleys of Svalbard, Norway. The central goal of the ongoing experiment is to determine whether a greater abundance of woody plants could provide a negative feedback to warming impacts on the carbon (C) balance of Arctic soils. Towards this, we used a combination of plant biopolymer analyses (cupric oxide oxidation and quantification of lignin-derived phenols and cutin/suberin-derived aliphatics) and radiocarbon-based estimates of C longevity and mean residence time (MRT) to characterize potential links between plant type and soil C pools. We found that graminoid species regenerate above- and belowground tissue each year, whereas woody species (Cassiope tetragona and Dryas octopetala) regenerated only leaves yearly. In contrast, C within live branches and roots persisted for 15-18 yr on average. Leaves from woody species remained nearly intact in surface litter for up to 20 yr without being incorporated into the upper soil horizon. Leaves from both graminoid and woody species were concentrated in lignin-derived phenols relative to roots, but

  4. The footprint of Alaskan tundra fires during the past half-century: implications for surface properties and radiative forcing

    USGS Publications Warehouse

    Rocha, Adrian V.; Loranty, Michael M.; Higuera, Phil E.; Mack, Michelle C.; Hu, Feng Sheng; Jones, Benjamin M.; Breen, Amy L.; Rastetter, Edward B.; Goetz, Scott J.; Shaver, Gus R.

    2012-01-01

    Recent large and frequent fires above the Alaskan arctic circle have forced a reassessment of the ecological and climatological importance of fire in arctic tundra ecosystems. Here we provide a general overview of the occurrence, distribution, and ecological and climate implications of Alaskan tundra fires over the past half-century using spatially explicit climate, fire, vegetation and remote sensing datasets for Alaska. Our analyses highlight the importance of vegetation biomass and environmental conditions in regulating tundra burning, and demonstrate that most tundra ecosystems are susceptible to burn, providing the environmental conditions are right. Over the past two decades, fire perimeters above the arctic circle have increased in size and importance, especially on the North Slope, indicating that future wildfire projections should account for fire regime changes in these regions. Remote sensing data and a literature review of thaw depths indicate that tundra fires have both positive and negative implications for climatic feedbacks including a decadal increase in albedo radiative forcing immediately after a fire, a stimulation of surface greenness and a persistent long-term (>10 year) increase in thaw depth. In order to address the future impact of tundra fires on climate, a better understanding of the control of tundra fire occurrence as well as the long-term impacts on ecosystem carbon cycling will be required.

  5. Estimating carbon and energy fluxes in arctic tundra

    NASA Astrophysics Data System (ADS)

    Gokkaya, K.; Jiang, Y.; Rastetter, E.; Shaver, G. R.; Rocha, A. V.

    2013-12-01

    Arctic ecosystems are undergoing a very rapid change due to climate change and their response to climate change has important implications for the global energy budget and carbon (C) cycling. Therefore, it is important to understand how (C) and energy fluxes in the Arctic will respond to climate change. However, attribution of these responses to climate is challenging because measured fluxes are the sum of multiple processes that respond differently to environmental factors. For example, net ecosystem exchange of CO2 (NEE) is the net result of gross (C) uptake by plant photosynthesis (GPP) and (C) loss by ecosystem respiration (ER) and similarly, evapotranspiration (i.e. latent energy, LE) is the sum of transpiration and evaporation. Partitioning of NEE into GPP and ER requires nighttime measurements of NEE, when photosynthesis does not take place, to be extrapolated to daytime. This is challenging in the Arctic because of the long photoperiod during the growing season and the errors involved during the extrapolation. Transpiration (energy), photosynthesis (carbon), and vegetation phenology are inherently coupled because leaf stomata are the primary regulators of gas exchange. Our objectives in this study are to i) estimate canopy resistance (Rc) based on a light use efficiency model, ii) utilize the estimated Rc to predict GPP and transpiration using a coupled C and energy model and thus improve the partitioning of NEE and LE, and iii) to test ensemble Kalman filter (EnKF) to estimate model parameters and improve model predictions. Results from one growing season showed that the model predictions can explain 75 and 71% of the variance in GPP and LE in the Arctic tundra ecosystem, respectively. When the model was embedded within the EnKF for estimating Rc, the amount of variance explained for GPP increased to 81% but there was no improvement for the prediction of LE. This suggests that the factors controlling LE are not fully integrated in the model such as the

  6. Methane production in sediments of small tundra ponds during winter

    NASA Astrophysics Data System (ADS)

    Macrae, M. L.; Fishback, L.; Bourbonniere, R. A.; Duguay, C. R.; Soliman, A. S.

    2011-12-01

    Shallow tundra ponds in the Churchill region of the Hudson Bay Lowlands (HBL) store large quantities of organic material in the form of sediments. Organic sediments in ponds and wetlands have been identified as a source of atmospheric methane (CH4) during the summer season in many landscapes. However, less is known about CH4 production and emission during the winter months, following the formation of an ice layer on the water surface. Unfrozen sediments may continue to produce methane (CH4) during this time, which may become trapped in the ponds beneath the ice layer. This occurrence has been identified in some regions through the sampling and analysis of CH4 bubbles frozen in lake ice. The goal of this project is to examine the potential for the production and trapping of CH4 in ponds beneath the pond ice (water/ice and sediment profiles) in the Churchill region of the HBL. Thermistor and gas sampling arrays were installed in the water and sediments of two ponds. Gas samples were collected at 1-4 week intervals at the sediment-water interface and at 0-15cm and 20-35 cm depth. Results show that sediments are indeed thawed for 3-4 months of the winter season, and deeper sediments remain within the range of 0 to -5 C whereas shallow sediment temperatures ranged between 10 and -10 C over an annual cycle. Laboratory experiments showed that little difference in CH4 production was observed at sediment temperatures between -2 and 5 C, whereas production was very low at -10 C. No significant differences in CH4 production rates were observed for different sediment depths in the laboratory. Field data collected between August 2010 and June 2011 showed consistent accumulation of CH4 in sediments following the formation of an ice layer on pond surfaces. However, CH4 concentrations in gas samplers decreased in February through April after sediments were frozen, but began to increase again (May-June) as sediments thawed and began to warm. Future work will include the examination

  7. Tundra ponds of the Yukon Delta, Alaska, and their macroinvertebrate communities.

    USGS Publications Warehouse

    Maciolek, J.A.

    1989-01-01

    The Yukon Delta, a low alluvial tundra in western Alaska, has more than 105 thaw-basin ponds within its 70000 km2 area. In 1984 and 1985, 68 ponds in three interior areas of the Delta were surveyed to determine limnological features, macroinvertebrate fauna, and trophic character. Ponds ranged up to 90 ha in area, 2 m in depth, and 17 m in elevation, and occurred in various temporal stages of growth and senescence. Among the 18 major invertebrate taxa collected, in order of decreasing frequency of occurrence, Trichoptera, Hemiptera, Diptera, Pelecypoda, Isopoda, Coleoptera, Gastropoda, and Oligochaeta were found in over 50% of the ponds. Trichoptera, the only taxon occurring in all ponds, was represented by 22 species of 6 families. The average Delta pond had 6.6 of the nine more common taxa. This measure of faunal richness was similar among study areas but was higher in low-tundra (sea level) ponds and in older ponds on raised tundra. In comparison, lentic invertebrate communities in five other areas of Alaskan and Canadian tundra had fewer taxa and also lower average richness based on occurrence of the same nine taxa.

  8. Geomorphic determinants of species composition of alpine tundra, Glacier National Park, U.S.A.

    USGS Publications Warehouse

    George P. Malanson,; Bengtson, Lindsey E.; Fagre, Daniel B.

    2012-01-01

    Because the distribution of alpine tundra is associated with spatially limited cold climates, global warming may threaten its local extent or existence. This notion has been challenged, however, based on observations of the diversity of alpine tundra in small areas primarily due to topographic variation. The importance of diversity in temperature or moisture conditions caused by topographic variation is an open question, and we extend this to geomorphology more generally. The extent to which geomorphic variation per se, based on relatively easily assessed indicators, can account for the variation in alpine tundra community composition is analyzed versus the inclusion of broad indicators of regional climate variation. Visual assessments of topography are quantified and reduced using principal components analysis (PCA). Observations of species cover are reduced using detrended correspondence analysis (DCA). A “best subsets” regression approach using the Akaike Information Criterion for selection of variables is compared to a simple stepwise regression with DCA scores as the dependent variable and scores on significant PCA axes plus more direct measures of topography as independent variables. Models with geographic coordinates (representing regional climate gradients) excluded explain almost as much variation in community composition as models with them included, although they are important contributors to the latter. The geomorphic variables in the model are those associated with local moisture differences such as snowbeds. The potential local variability of alpine tundra can be a buffer against climate change, but change in precipitation may be as important as change in temperature.

  9. Importance of Marine-Derived Nutrients Supplied by Planktivorous Seabirds to High Arctic Tundra Plant Communities

    PubMed Central

    Zwolicki, Adrian; Zmudczyńska-Skarbek, Katarzyna; Richard, Pierre; Stempniewicz, Lech

    2016-01-01

    We studied the relative importance of several environmental factors for tundra plant communities in five locations across Svalbard (High Arctic) that differed in geographical location, oceanographic and climatic influence, and soil characteristics. The amount of marine-derived nitrogen in the soil supplied by seabirds was locally the most important of the studied environmental factors influencing the tundra plant community. We found a strong positive correlation between δ15N isotopic values and total N content in the soil, confirming the fundamental role of marine-derived matter to the generally nutrient-poor Arctic tundra ecosystem. We also recorded a strong correlation between the δ15N values of soil and of the tissues of vascular plants and mosses, but not of lichens. The relationship between soil δ15N values and vascular plant cover was linear. In the case of mosses, the percentage ground cover reached maximum around a soil δ 15N value of 8‰, as did plant community diversity. This soil δ15N value clearly separated the occurrence of plants with low nitrogen tolerance (e.g. Salix polaris) from those predominating on high N content soils (e.g. Cerastium arcticum, Poa alpina). Large colonies of planktivorous little auks have a great influence on Arctic tundra vegetation, either through enhancing plant abundance or in shaping plant community composition at a local scale. PMID:27149113

  10. Carbon storage in frozen loess and soils of the mammoth tundra-steppe biome

    NASA Astrophysics Data System (ADS)

    Zimov, N.; Zimov, S.; Zimova, A.; Zimova, G.; Chuprynin, V.; Chapin, S. F.

    2008-12-01

    During the Last Glacial Maximum (LGM), atmospheric CO2 concentration was 80-100 ppmv lower than in pre- industrial times. At the time of LGM steppe-tundra was the most extensive biome on Earth. Some estimates of the C storage in that biome assume that it was similar to cold desert and that the terrestrial carbon (C) reservoir increased at the Pleistocene-Holocene transition by 400-1300 Gt, requiring that the world oceans be a large C source. To estimate C storage in the entire steppe-tundra biome we used data of C storage in soils of this biome that persisted in permafrost of Siberia and Alaska and developed a model that describes C accumulation in soil profiles and in permafrost. The model shows a slow but consistent C increase in soil when permafrost appears. At the Pleistocene-Holocene boundary tundra-steppe soils became a C source of greater than 1000 Gt to the atmosphere. The implications of these model results are that the ocean was not a source of carbon but absorbed several hundreds of gigatons of C at that time. The model results also show that restoring the tundra-steppe ecosystem in northern Siberia would enhance soil C storage.

  11. Alpine forest-tundra ecotone response to temperature change,Sayan Mountains, Siberia

    NASA Technical Reports Server (NTRS)

    Ranson, K Jon; Kharuk, Vyetcheslav I.

    2007-01-01

    Models of climate change predict shifts of vegetation zones. Tree response to climate trends is most likely observable in the forest-tundra ecotone, where temperature mainly limits tree growth. There is evidence of vegetation change on the northern treeline However, observations on alpine tree line response are controversial. In this NEESPI related study we show that during the past three decades in the forest-tundra ecotone of the Sayan Mountains, Siberia, there was an increase in forest stand crown closure, regeneration propagation into the alpine tundra, and transformation of prostrate Siberian pine and fir into arboreal forms. We found that these changes occurred since the mid 1980s, and strongly correlates with positive temperature (and to a lesser extent, precipitation) trends. Improving climate for forest growth( i.e., warmer temperatures and increased precipitation) provides competitive advantages to Siberian pine in the alpine forest-tundra ecotone, as well as in areas typically dominated by larch, where it has been found to be forming a secondary canopy layer. Substitution of deciduous conifer, larch, for evergreen conifers, decreases albedo and provides positive feedback for temperature increase.

  12. Resistance and resilience of tundra plant communities to disturbance by winter seismic vehicles

    SciTech Connect

    Felix, N.A.; Raynolds, M.K.; Jorgenson, J.C.; DuBois, K.E. )

    1992-02-01

    Effects of winter seismic exploration on arctic tundra were evaluated on the coastal plain of the Arctic National Wildlife Refuge, four to five growing seasons after disturbance. Plant cover, active layer depths, and track depression were measured at plots representing major tundra plant communities and different levels of initial disturbance. Results are compared with the initial effects reported earlier. Little resilience was seen in any vegetation type, with no clearly decreasing trends in community dissimilarity. Active layer depths remained greater on plots in all nonriparian vegetation types, and most plots still had visible trails. Decreases in plant cover persisted on most plots, although a few species showed recovery or increases in cover above predisturbance level. Moist sedge-shrub tundra and dryas terraces had the largest community dissimilarities initially, showing the least resistance to high levels of winter vehicle disturbance. Community dissimilarity continued to increase for five seasons in moist sedge-shrub tundra, with species composition changing to higher sedge cover and lower shrub cover. The resilience amplitude may have been exceeded on four plots which had significant track depression.

  13. CLIMATIC EFFECTS ON TUNDRA CARBON STORAGE INFERRED FROM EXPERIMENTAL DATA AND A MODEL

    EPA Science Inventory

    We used a process-based model of ecosystem carbon (C) and nitrogen (N)dynamics, MBL-GEM (Marine Biological Laboratory General Ecosystem Model), to integrated and analyze the results of several experiments that examined the response of arctic tussock tundra to manipulations of CO2...

  14. Determining Regional Arctic Tundra Carbon Exchange: A Bottom-Up Approach

    NASA Technical Reports Server (NTRS)

    Huemmrich, Fred

    2006-01-01

    This viewgraph presentation reviews the carbon atmospheric exchange with Arctic tundra. In the Arctic the ecosystem has been a net carbon sink. The project investigates the question of how might climate warming effect high latitude ecosystems and the Earth ecosystems and how to measure the changes.

  15. DIFFERENTIATION IN N15 UPTAKE AND THE ORGANIZATION OF AN ARCTIC TUNDRA PLANT COMMUNITY

    EPA Science Inventory

    We used N15 soil-labeling techniques to examine how the dominant species in a N-limited, tussock tundra plant community partitioned soil N, and how such partitioning may contribute to community organization. The five most abundant species were well differentiated with respect to...

  16. Importance of Marine-Derived Nutrients Supplied by Planktivorous Seabirds to High Arctic Tundra Plant Communities.

    PubMed

    Zwolicki, Adrian; Zmudczyńska-Skarbek, Katarzyna; Richard, Pierre; Stempniewicz, Lech

    2016-01-01

    We studied the relative importance of several environmental factors for tundra plant communities in five locations across Svalbard (High Arctic) that differed in geographical location, oceanographic and climatic influence, and soil characteristics. The amount of marine-derived nitrogen in the soil supplied by seabirds was locally the most important of the studied environmental factors influencing the tundra plant community. We found a strong positive correlation between δ15N isotopic values and total N content in the soil, confirming the fundamental role of marine-derived matter to the generally nutrient-poor Arctic tundra ecosystem. We also recorded a strong correlation between the δ15N values of soil and of the tissues of vascular plants and mosses, but not of lichens. The relationship between soil δ15N values and vascular plant cover was linear. In the case of mosses, the percentage ground cover reached maximum around a soil δ 15N value of 8‰, as did plant community diversity. This soil δ15N value clearly separated the occurrence of plants with low nitrogen tolerance (e.g. Salix polaris) from those predominating on high N content soils (e.g. Cerastium arcticum, Poa alpina). Large colonies of planktivorous little auks have a great influence on Arctic tundra vegetation, either through enhancing plant abundance or in shaping plant community composition at a local scale.

  17. Micrometeorological measurements of CH4 and CO2 exchange between the atmosphere and subarctic tundra

    NASA Technical Reports Server (NTRS)

    Fan, S. M.; Wofsy, S. C.; Bakwin, P. S.; Jacob, D. J.; Anderson, S. M.; Kebabian, P. L.; Mcmanus, J. B.; Kolb, C. E.; Fitzjarrald, D. R.

    1992-01-01

    Eddy correlation flux measurements and concentration profiles of total hydrocarbons (THC) and CO2 were combined to provide a comprehensive record of atmosphere-biosphere exchange for these gases over a 30-day period in July-August 1988 in the Yukon-Kuskokwin River Delta of Alaska. Over 90 percent of net ecosystem exchanges of THC were due to methane. Lakes and wet meadow tundra provided the major sources of methane. The average fluxes from lake, dry tundra, and wet tundra were 11 +/- 3, 29 +/- 3, and 57 +/- 6 mg CH4/sq m/d, respectively. The mean remission rate for the site was 25 mg/sq m/d. Maximum uptake of CO2 by the tundra was 1.4 gC/sq m/d between 1000 and 1500 hrs, and nocturnal respiration averaged 0.73 gC/sq m/d. Net uptake of CO2 was 0.30 gC/sq m/d for the 30 days of measurement; methane flux accounted for 6 percent of CO2 net uptake.

  18. Global assessment of experimental climate warming on tundra vegetation: heterogeneity over space and time.

    PubMed

    Elmendorf, Sarah C; Henry, Gregory H R; Hollister, Robert D; Björk, Robert G; Bjorkman, Anne D; Callaghan, Terry V; Collier, Laura Siegwart; Cooper, Elisabeth J; Cornelissen, Johannes H C; Day, Thomas A; Fosaa, Anna Maria; Gould, William A; Grétarsdóttir, Járngerður; Harte, John; Hermanutz, Luise; Hik, David S; Hofgaard, Annika; Jarrad, Frith; Jónsdóttir, Ingibjörg Svala; Keuper, Frida; Klanderud, Kari; Klein, Julia A; Koh, Saewan; Kudo, Gaku; Lang, Simone I; Loewen, Val; May, Jeremy L; Mercado, Joel; Michelsen, Anders; Molau, Ulf; Myers-Smith, Isla H; Oberbauer, Steven F; Pieper, Sara; Post, Eric; Rixen, Christian; Robinson, Clare H; Schmidt, Niels Martin; Shaver, Gaius R; Stenström, Anna; Tolvanen, Anne; Totland, Orjan; Troxler, Tiffany; Wahren, Carl-Henrik; Webber, Patrick J; Welker, Jeffery M; Wookey, Philip A

    2012-02-01

    Understanding the sensitivity of tundra vegetation to climate warming is critical to forecasting future biodiversity and vegetation feedbacks to climate. In situ warming experiments accelerate climate change on a small scale to forecast responses of local plant communities. Limitations of this approach include the apparent site-specificity of results and uncertainty about the power of short-term studies to anticipate longer term change. We address these issues with a synthesis of 61 experimental warming studies, of up to 20 years duration, in tundra sites worldwide. The response of plant groups to warming often differed with ambient summer temperature, soil moisture and experimental duration. Shrubs increased with warming only where ambient temperature was high, whereas graminoids increased primarily in the coldest study sites. Linear increases in effect size over time were frequently observed. There was little indication of saturating or accelerating effects, as would be predicted if negative or positive vegetation feedbacks were common. These results indicate that tundra vegetation exhibits strong regional variation in response to warming, and that in vulnerable regions, cumulative effects of long-term warming on tundra vegetation - and associated ecosystem consequences - have the potential to be much greater than we have observed to date.

  19. Spatial characteristics of ecosystem respiration in three tundra ecosystems of Alaska

    NASA Astrophysics Data System (ADS)

    Kim, Yongwon; Lee, Bang-Yong; Suzuki, Rikie; Kushida, Keiji

    2016-09-01

    Ecosystem respiration (ER) is a significant source in estimating terrestrial carbon budget under climate change. Here, we report on the assessment of spatial characteristics of ER, using manual chamber over three tundra ecosystems of Alaska. Annual simulated ER was 254-307 g CO2 m-2 based on in-situ air temperature and 212-305 g CO2 m-2 based on soil temperature, at Council, North Slope, and Arctic National Wildlife Refuge (ANWR) sites of Alaska. Growing-season ERs correspond to 79-92% (air temperature) and 81-86% (soil temperature) of simulated annual ER. Hence, soil temperature is a significant driver in modulating ER over tundra, suggesting soil temperature elucidates more than 80% of air temperature. At Council, between 31 and 84 sampling points during the growing season were required to attain spatial representativeness for ER, falling within ±10% of the full sample mean, with a 95% confidence level. At North Slope and ANWR sites, the number of sampling points was chosen to yield results within at least ±20%, with a 90% confidence level. These findings suggest that larger-size chamber and its measurement frequency can overcome logistical constraints and determine mean ER at tundra sites for the quantitative assessment of the tundra carbon budget in response to drastically changing Arctic environment and climate.

  20. Assessing the Tundra-taiga Boundary with Multi-Sensor Satellite Data

    NASA Technical Reports Server (NTRS)

    Ranson, K. J.; Sun, G.; Kharuk, V. I.; Kovacs, K.

    2004-01-01

    Monitoring the dynamics of the circumpolar boreal forest (taiga) and Arctic tundra boundary is important for understanding the causes and consequences of changes observed in these areas. This ecotone, the world's largest, stretches for over 13,400 km and marks the transition between the northern limits of forests and the southern margin of the tundra. Because of the inaccessibility and large extent of this zone, remote sensing data can play an important role for mapping the characteristics and monitoring the dynamics. Basic understanding of the capabilities of existing space borne instruments for these purposes is required. In this study we examined the use of several remote sensing techniques for identifying the existing tundra- taiga ecotone. These include Landsat-7, MISR, MODIS and RADARSAT data. Historical cover maps, recent forest stand measurements and high-resolution IKONOS images were used for local ground truth. It was found that a tundra-taiga transitional area can be characterized using multi- spectral Landsat ETM+ summer images, multi-angle MISR red band reflectance images, RADARSAT images with larger incidence angle, or multi-temporal and multi-spectral MODIS data. Because of different resolutions and spectral regions covered, the transition zone maps derived from different data types were not identical, but the general patterns were consistent.

  1. Identification And Survival Of Bacteriohopanepolyol In A Hot Spring Microbial Mat

    NASA Technical Reports Server (NTRS)

    Janke, Linda L.; Chang, Sherwood (Technical Monitor)

    1995-01-01

    The polar lipids of a hot spring microbial mat located in Yellowstone National Park were examined for the presence of bacteriohopanepolvols (BHP). BHP are a group of molecules consisting of a hopanoid (peotacyclic triterpene) linked via a n-alkyl polyhydroxylated chain to a variety of polar end groups. BHP have been isolated in varying amounts from phylogenetically diverse eubacterial groups including cyanobacteria, methanotrophs and the Rhodospirillaceae. The hopanoids are excellent biomarkers and have been detected in sedimentary rocks as old as 1.7 bya. In order to interpret the ancient organic record, it is important to understand the abundance, source and fate of such biomarker compounds in microbial mats. A 40 sq cm mat section was taken from a 52 to 55 C site in the effluent channel of Octopus Spring and was sampled vertically over approximately 16 mm. The first 5-6 mm was sectioned into a top green layer (310 mg dry weight) and several subjacent, deep orange layers (240 and 250 mg, respectively). The lower 10 mm of the mat was sectioned into two gelatinous orange layers containing a siliceous gritty material (260 and 440 mg) which increased with depth, and a bottom layer composed almost exclusively of siliceous sinter (4.1 g). The progressive decrease in total organic carbon from 45% in the top green layer to only 4% in the bottom layer reflects the observed increase in siliceous deposition. GC-MS analysis of the phospholipid and glycolipid fatty acids yielded predominantly saturated normal chain acids, n-15 to n-18, and iso-branched acids, i-15 to i-17. Small amounts of unsaturated fatty acids (16:1, two positional isomers of 18:1, and two cyclopropyl acids, C(sub 17) and C(sub 19)) were present mainly in the top layer. Esterified fatty acid which is a good index for intact cellular membrane, i.e. viable organisms, was highest in the top two layers (203 and 231 micro g/mg total lipid, respectively) and gradually decreased to 66 micro g/mg total lipid in

  2. First insights into fern matK phylogeny.

    PubMed

    Kuo, Li-Yaung; Li, Fay-Wei; Chiou, Wen-Liang; Wang, Chun-Neng

    2011-06-01

    MatK, the only maturase gene in the land plant plastid genome, is a very popular phylogenetic marker that has been extensively applied in reconstructing angiosperm phylogeny. However, the use of matK in fern phylogeny is largely unknown, due to difficulties with amplification: ferns have lost the flanking trnK exons, typically the region used for designing stable priming sites. We developed primers that are either universal or lineage-specific that successfully amplify matK across all fern families. To evaluate whether matK is as powerful a phylogenetic marker in ferns as in angiosperms, we compared its sequence characteristics and phylogenetic performance to those of rbcL and atpA. Among these three genes, matK has the highest variability and substitution evenness, yet shows the least homoplasy. Most importantly, applying matK in fern phylogenetics better resolved relationships among families, especially within eupolypods I and II. Here we demonstrate the power of matK for fern phylogenetic reconstruction, as well as provide primers and extensive sequence data that will greatly facilitate future evolutionary studies of ferns.

  3. Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms

    DOE PAGES

    Kim, Young-Mo; Nowack, Shane; Olsen, Millie; ...

    2015-04-17

    Dynamic environmental factors such as light, nutrients, salt, and temperature continuously affect chlorophototrophic microbial mats, requiring adaptative and acclimative responses to stabilize composition and function. Quantitative metabolomics analysis can provide insights into metabolite dynamics for understanding community response to such changing environmental conditions. In this study, we quantified volatile organic acids, polar metabolites (amino acids, glycolytic and citric acid cycle intermediates, nucleobases, nucleosides, and sugars), wax esters, and polyhydroxyalkanoates, resulting in the identification of 104 metabolites and related molecules in thermal chlorophototrophic microbial mat cores collected over a diel cycle in Mushroom Spring, Yellowstone National Park. A limited number ofmore » predominant taxa inhabiting this community and their functional potentials have been previously identified through metagenomic and metatranscriptomic analyses and in situ metabolisms and metabolic interactions among these taxa have been hypothesized. Our metabolomics results confirmed the diel cycling of photorespiration (e.g. glycolate) and fermentation (e.g. acetate, propionate, and lactate) products, the carbon storage polymers polyhydroxyalkanoates, and dissolved gases (e.g. H2 and CO2) in the waters overlying the mat, which were hypothesized to occur in major mat chlorophototrophic community members. In addition, we have formulated the following new hypotheses: 1) the morning hours are a time of biosynthesis of amino acids, DNA, and RNA; 2) Synechococcus spp. produce CH4 via metabolism of phosphonates, and photo-inhibited cells may also produce lactate via fermentation as an alternate metabolism; 3) glycolate and lactate are exchanged among Synechococcus and Roseiflexus spp.; and 4) fluctuations in many metabolite pools (e.g. wax esters) at different times of day result from species found at different depths within the mat responding to temporal differences

  4. Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms

    SciTech Connect

    Kim, Young-Mo; Nowack, Shane; Olsen, Millie; Becraft, Eric; Wood, Jason M.; Thiel, Vera; Klapper, Isaac; Kuhl, Michael; Fredrickson, Jim K.; Bryant, Donald A.; Ward, David M.; Metz, Thomas O.

    2015-04-17

    Dynamic environmental factors such as light, nutrients, salt, and temperature continuously affect chlorophototrophic microbial mats, requiring adaptative and acclimative responses to stabilize composition and function. Quantitative metabolomics analysis can provide insights into metabolite dynamics for understanding community response to such changing environmental conditions. In this study, we quantified volatile organic acids, polar metabolites (amino acids, glycolytic and citric acid cycle intermediates, nucleobases, nucleosides, and sugars), wax esters, and polyhydroxyalkanoates, resulting in the identification of 104 metabolites and related molecules in thermal chlorophototrophic microbial mat cores collected over a diel cycle in Mushroom Spring, Yellowstone National Park. A limited number of predominant taxa inhabiting this community and their functional potentials have been previously identified through metagenomic and metatranscriptomic analyses and in situ metabolisms and metabolic interactions among these taxa have been hypothesized. Our metabolomics results confirmed the diel cycling of photorespiration (e.g. glycolate) and fermentation (e.g. acetate, propionate, and lactate) products, the carbon storage polymers polyhydroxyalkanoates, and dissolved gases (e.g. H2 and CO2) in the waters overlying the mat, which were hypothesized to occur in major mat chlorophototrophic community members. In addition, we have formulated the following new hypotheses: 1) the morning hours are a time of biosynthesis of amino acids, DNA, and RNA; 2) Synechococcus spp. produce CH4 via metabolism of phosphonates, and photo-inhibited cells may also produce lactate via fermentation as an alternate metabolism; 3) glycolate and lactate are exchanged among Synechococcus and Roseiflexus spp.; and 4) fluctuations in many metabolite pools (e.g. wax esters) at different times of day result from species found at different depths within the mat responding to temporal differences in their

  5. Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms

    PubMed Central

    Kim, Young-Mo; Nowack, Shane; Olsen, Millie T.; Becraft, Eric D.; Wood, Jason M.; Thiel, Vera; Klapper, Isaac; Kühl, Michael; Fredrickson, James K.; Bryant, Donald A.; Ward, David M.; Metz, Thomas O.

    2015-01-01

    Dynamic environmental factors such as light, nutrients, salt, and temperature continuously affect chlorophototrophic microbial mats, requiring adaptive and acclimative responses to stabilize composition and function. Quantitative metabolomics analysis can provide insights into metabolite dynamics for understanding community response to such changing environmental conditions. In this study, we quantified volatile organic acids, polar metabolites (amino acids, glycolytic and citric acid cycle intermediates, nucleobases, nucleosides, and sugars), wax esters, and polyhydroxyalkanoates, resulting in the identification of 104 metabolites and related molecules in thermal chlorophototrophic microbial mat cores collected over a diel cycle in Mushroom Spring, Yellowstone National Park. A limited number of predominant taxa inhabit this community and their functional potentials have been previously identified through metagenomic and metatranscriptomic analyses and in situ metabolisms, and metabolic interactions among these taxa have been hypothesized. Our metabolomics results confirmed the diel cycling of photorespiration (e.g., glycolate) and fermentation (e.g., acetate, propionate, and lactate) products, the carbon storage polymers polyhydroxyalkanoates, and dissolved gasses (e.g., H2 and CO2) in the waters overlying the mat, which were hypothesized to occur in major mat chlorophototrophic community members. In addition, we have formulated the following new hypotheses: (1) the morning hours are a time of biosynthesis of amino acids, DNA, and RNA; (2) photo-inhibited cells may also produce lactate via fermentation as an alternate metabolism; (3) glycolate and lactate are exchanged among Synechococcus and Roseiflexus spp.; and (4) fluctuations in many metabolite pools (e.g., wax esters) at different times of day result from species found at different depths within the mat responding to temporal differences in their niches. PMID:25941514

  6. Manganese Influences Carbonate Precipitation in a Laminated Microbial Mat

    NASA Astrophysics Data System (ADS)

    Krusor, M.; Grim, S. L.; Wilmeth, D.; Johnson, H.; Berelson, W.; Stevenson, B. S.; Stamps, B. W.; Corsetti, F. A.; Spear, J. R.

    2015-12-01

    Investigating mineralization within modern microbial mats informs our interpretation of ancient microbialites and the mineralization process. Microbial mats in Little Hot Creek (LHC), California contain 4 distinct layers with different microbiota. Each layer of the mat is supersaturated with regard to calcium carbonate (CaCO3), which increases with depth. Total organic carbon decreases with depth through the mat. We used 13C-labeled bicarbonate incubations of each mat layer to calculate growth rates of organic carbon and CaCO3 within the mat. Incubations were also amended with Mn or Mg to test their effect on rates of CaCO3 and organic carbon formation. The Mn-amended top layer increased CaCO3 precipitation and organic carbon growth. Mn increased organic carbon production in the lowest layer to a lesser extent, but not growth of CaCO3. Mn addition had no effect on growth rates in the two intervening layers. Mg amendment stimulated only organic carbon formation in the top layer, with little to no effect on the lower layers or overall CaCO3 formation. We attribute the elevated CaCO3 precipitation noted after Mn addition to increased oxygenic photosynthetic activity. Oxygenic photosynthesis requires Mn as an enzyme cofactor and promotes carbonate precipitation. We propose that the phototrophic community was responsible for most of the CaCO3 precipitation in the upper layer. Phototrophs gradually moved upwards for optimal access to sunlight, and as the mat grew, "tenant" microorganisms inhabited the lower carbonate layers while the "builders" remained on top. The relatively constant percentages of inorganic carbon below the top layer combined with observed minimal CaCO3 precipitation under laboratory conditions suggest that additional research into potential metabolisms that impact carbonate formation would be informative. These results improve our understanding of the linkages between microbial metabolisms, carbonate precipitation in microbial mats, and the potential

  7. Using Intact Iron Microbial Mats to Gain Insights Into Mat Ecology and Geochemical Niche at the Microbial Scale

    NASA Astrophysics Data System (ADS)

    Glazer, B. T.; Chan, C. S. Y.; Mcallister, S.; Leavitt, A.; Emerson, D.

    2015-12-01

    Microbial mats are formed by microorganisms working in coordinated symbiosis, often benefitting the community by controlling the local geochemical or physical environment. Thus, the ecology of the mat depends on the individual roles of microbes organized into niches within a larger architecture. Chemolithotrophic Fe-oxidizing bacteria (FeOB) form distinctive Fe oxyhydroxide biominerals which constitute the building blocks of the mat. However, the majority of our progress has been in understanding the overall community structure. Understanding the physical mat structure on the microbial scale is important to unraveling FeOB evolution, the biogeochemistry and ecology of Fe-rich habitats, and ultimately interpreting FeOB biosignatures in the rock record. Mats in freshwater and marine environments contain strikingly similar biomineral morphologies, yet they are formed by phylogenetically distinct microorganisms. This suggests that the overall architecture and underlying genetics of freshwater and marine mats has evolved to serve particular roles specific to Fe oxidation. Thus, we conducted a comparative study of Fe seep freshwater mats and marine hydrothermal mats. We have developed a new approach to sampling Fe mats in order to preserve the delicate structure for analysis by confocal and scanning electron microscopy. Our analyses of these intact mats show that freshwater and marine mats are similarly initiated by a single type of structure-former. These ecosystem engineers form either a hollow sheath or a twisted stalk biomineral during mat formation, with a highly directional structure. These microbes appear to be the vanguard organisms that anchor the community within oxygen/Fe(II) gradients, further allowing for community succession in the mat interior as evidenced by other mineralized morphologies. Patterns in biomineral thickness and directionality were indicative of redox gradients and temporal changes in the geochemical environment. These observations show that

  8. Will Arctic ground squirrels impede or accelerate climate-induced vegetation changes to the Arctic tundra?

    NASA Astrophysics Data System (ADS)

    Dalton, J.; Flower, C. E.; Brown, J.; Gonzalez-Meler, M. A.; Whelan, C.

    2014-12-01

    Considerable attention has been given to the climate feedbacks associated with predicted vegetation shifts in the Arctic tundra in response to global environmental change. However, little is known regarding the extent to which consumers can facilitate or respond to shrub expansion. Arctic ground squirrels, the largest and most northern ground squirrel, are abundant and widespread throughout the North American tundra. Their broad diet of seeds, flowers, herbage, bird's eggs and meat speaks to the need to breed, feed, and fatten in a span of some 12-16 weeks that separate their 8-9 month bouts of hibernation with the potential consequence to impact ecosystem dynamics. Therefore Arctic ground squirrels are a good candidate to evaluate whether consumers are mere responders (bottom-up effects) or drivers (top-down) of the observed and predicted vegetation changes. As a start towards this question, we measured the foraging intensity (giving-up densities) of Arctic ground squirrels in experimental food patches within which the squirrels experience diminishing returns as they seek the raisins and peanuts that we provided at the Toolik Lake field station in northern Alaska. If the squirrels show their highest feeding intensity in the shrubs, they may impede vegetation shifts by slowing the establishment and expansion of shrubs in the tundra. Conversely, if they show their lowest feeding intensity within shrub dominated areas, they may accelerate vegetation shifts. We found neither. Feeding intensity varied most among transects and times of day, and least along a tundra-to-shrub vegetation gradient. This suggests that the impacts of squirrels will be heterogeneous - in places responders and in others drivers. We should not be surprised then to see patches of accelerated and impeded vegetation changes in the tundra ecosystem. Some of these patterns may be predictable from the foraging behavior of Arctic ground squirrels.

  9. Atmospheric loading of nitrogen to alpine tundra in the Colorado front range

    SciTech Connect

    Sievering, H.; Burton, D. ); Caine, N. )

    1992-12-01

    Dry deposition of atmospheric nitrogen gas and aerosol species was estimated for the alpine tundra of Niwot Ridge, 3525 m elevation in the Colorado Rockies. Comparisons, for the 4 month long growing season and the remaining 8 months of the year, were made with wet deposition and throughfall incident measurements taken during 1987-1989. Dry deposition of N to the tundra is estimated to be equal to or slightly greater than its wet deposition. During the mid-May to mid-September growing season, atmospheric N deposition is > 1.0 mg N m[sup -2] d[sup -1] directly from the atmosphere with a similar amount contributed indirectly as NO[sub 3]-N in snowmelt water as a result of dry and wet deposition to the winter snowpack. The total N deposition to Niwot Ridge tundra during the growing season of about 2 mg N m[sup -2] d[sup -1] may be compared to an earlier measurement of dry plus fog deposition (1-2 mg N m[sup -2] d[sup -1]) to a subalpine coniferous canopy at Niwot Ridge. Nitrate yields from two small drainage basins at Niwot Ridge match these fluxes. Seven years of record from an unvegetated glacial cirque suggest an average yield from the alpine of 0.7 mg N m[sup -2] d[sup -1]. The equivalent estimate for a basin with 50% tundra vegetation cover is 0.4 mg N m[sup -2] d[sup -1]. The contrast in these two estimates of daily averaged N yields for the entire year suggests the retention of nearly 1 mg N m[sup -2] d[sup -1] during the growing season in the more vegetated basin. The sink for this N could be the tundra soil and vegetation where biological activity is often limited by the availability of N. 26 refs., 3 tabs.

  10. Greater shrub dominance alters breeding habitat and food resources for migratory songbirds in Alaskan arctic tundra.

    PubMed

    Boelman, Natalie T; Gough, Laura; Wingfield, John; Goetz, Scott; Asmus, Ashley; Chmura, Helen E; Krause, Jesse S; Perez, Jonathan H; Sweet, Shannan K; Guay, Kevin C

    2015-04-01

    Climate warming is affecting the Arctic in multiple ways, including via increased dominance of deciduous shrubs. Although many studies have focused on how this vegetation shift is altering nutrient cycling and energy balance, few have explicitly considered effects on tundra fauna, such as the millions of migratory songbirds that breed in northern regions every year. To understand how increasing deciduous shrub dominance may alter breeding songbird habitat, we quantified vegetation and arthropod community characteristics in both graminoid and shrub dominated tundra. We combined measurements of preferred nest site characteristics for Lapland longspurs (Calcarius lapponicus) and Gambel's White-crowned sparrows (Zonotrichia leucophrys gambelii) with modeled predictions for the distribution of plant community types in the Alaskan arctic foothills region for the year 2050. Lapland longspur nests were found in sedge-dominated tussock tundra where shrub height does not exceed 20 cm, whereas White-crowned sparrows nested only under shrubs between 20 cm and 1 m in height, with no preference for shrub species. Shrub canopies had higher canopy-dwelling arthropod availability (i.e. small flies and spiders) but lower ground-dwelling arthropod availability (i.e. large spiders and beetles). Since flies are the birds' preferred prey, increasing shrubs may result in a net enhancement in preferred prey availability. Acknowledging the coarse resolution of existing tundra vegetation models, we predict that by 2050 there will be a northward shift in current White-crowned sparrow habitat range and a 20-60% increase in their preferred habitat extent, while Lapland longspur habitat extent will be equivalently reduced. Our findings can be used to make first approximations of future habitat change for species with similar nesting requirements. However, we contend that as exemplified by this study's findings, existing tundra modeling tools cannot yet simulate the fine-scale habitat

  11. Surface energy exchanges along a tundra-forest transition and feedbacks to climate

    USGS Publications Warehouse

    Beringer, J.; Chapin, F. S.; Thompson, Catharine Copass; McGuire, A.D.

    2005-01-01

    Surface energy exchanges were measured in a sequence of five sites representing the major vegetation types in the transition from arctic tundra to forest. This is the major transition in vegetation structure in northern high latitudes. We examined the influence of vegetation structure on the rates of sensible heating and evapotranspiration to assess the potential feedbacks to climate if high-latitude warming were to change the distribution of these vegetation types. Measurements were made at Council on the Seward Peninsula, Alaska, at representative tundra, low shrub, tall shrub, woodland (treeline), and boreal forest sites. Structural differences across the transition from tundra to forest included an increase in the leaf area index (LAI) from 0.52 to 2.76, an increase in canopy height from 0.1 to 6.1 m, and a general increase in canopy complexity. These changes in vegetation structure resulted in a decrease in albedo from 0.19 to 0.10 as well as changes to the partitioning of energy at the surface. Bulk surface resistance to water vapor flux remained virtually constant across sites, apparently because the combined soil and moss evaporation decreased while transpiration increased along the transect from tundra to forest. In general, sites became relatively warmer and drier along the transect with the convective fluxes being increasingly dominated by sensible heating, as evident by an increasing Bowen ratio from 0.94 to 1.22. The difference in growing season average daily sensible heating between tundra and forest was 21 W m-2. Fluxes changed non-linearly along the transition, with both shrubs and trees substantially enhancing heat transfer to the atmosphere. These changes in vegetation structure that increase sensible heating could feed back to enhance warming at local to regional scales. The magnitude of these vegetation effects on potential high-latitude warming is two to three times greater than suggested by previous modeling studies. ?? 2005 Elsevier B.V. All

  12. Greater deciduous shrub abundance extends tundra peak season and increases modeled net CO2 uptake.

    PubMed

    Sweet, Shannan K; Griffin, Kevin L; Steltzer, Heidi; Gough, Laura; Boelman, Natalie T

    2015-06-01

    Satellite studies of the terrestrial Arctic report increased summer greening and longer overall growing and peak seasons since the 1980s, which increases productivity and the period of carbon uptake. These trends are attributed to increasing air temperatures and reduced snow cover duration in spring and fall. Concurrently, deciduous shrubs are becoming increasingly abundant in tundra landscapes, which may also impact canopy phenology and productivity. Our aim was to determine the influence of greater deciduous shrub abundance on tundra canopy phenology and subsequent impacts on net ecosystem carbon exchange (NEE) during the growing and peak seasons in the arctic foothills region of Alaska. We compared deciduous shrub-dominated and evergreen/graminoid-dominated community-level canopy phenology throughout the growing season using the normalized difference vegetation index (NDVI). We used a tundra plant-community-specific leaf area index (LAI) model to estimate LAI throughout the green season and a tundra-specific NEE model to estimate the impact of greater deciduous shrub abundance and associated shifts in both leaf area and canopy phenology on tundra carbon flux. We found that deciduous shrub canopies reached the onset of peak greenness 13 days earlier and the onset of senescence 3 days earlier compared to evergreen/graminoid canopies, resulting in a 10-day extension of the peak season. The combined effect of the longer peak season and greater leaf area of deciduous shrub canopies almost tripled the modeled net carbon uptake of deciduous shrub communities compared to evergreen/graminoid communities, while the longer peak season alone resulted in 84% greater carbon uptake in deciduous shrub communities. These results suggest that greater deciduous shrub abundance increases carbon uptake not only due to greater leaf area, but also due to an extension of the period of peak greenness, which extends the period of maximum carbon uptake.

  13. Human impacts on the tundra-taiga zone dynamics: the case of the Russian lesotundra.

    PubMed

    Vlassova, T K

    2002-08-01

    The tundra-taiga zone is considered not only as a natural ecotone, but as a unique fringe zone with socioeconomic peculiarities. This holistic approach enables us to analyze several significant types of human impacts (industrial impacts and those associated with renewable resources development, including traditional reindeer herding and human settlements) and their role in the displacement of the lesotundra zone. In Russia, there is much evidence of deforestation and ecosystem degradation in different regions of the lesotundra zone and the northern taiga which borders the lesotundra zone. One indicator of this is that in the Archangelsk region and the Komi Republic, the observed current southern border of the lesotundra zone lies 40-100 km to the south of the southern boundary of the Protection Belt of Pretundra Forests, established in 1959. Human impacts also displace the northern boundary of the lesotundra zone (the boundary with the tundra zone) to the south. As a result, according to published estimations, the total area of human-made tundra and lesotundra stretching from the Kola Peninsula to Chukotka, is c. 470-500,000 km2. The increases in man-made tundra lead to negative consequences for the sociocultural sustainability of the lesotundra zone, a decrease in the quality of life (notably for permanent residents and native people and increases in mortality and depopulation. It cannot be predicted with any certainty that climate warming in the tundra-taiga zone will lead to a northward movement of the boreal forest treeline. We need also to consider the human impacts discussed in this article, which may actually lead to a southward movement of the lesotundra zone.

  14. The MAT locus genes play different roles in sexual reproduction and pathogenesis in Fusarium graminearum.

    PubMed

    Zheng, Qian; Hou, Rui; Juanyu; Zhang; Ma, Jiwen; Wu, Zhongshou; Wang, Guanghui; Wang, Chenfang; Xu, Jin-Rong

    2013-01-01

    Sexual reproduction plays a critical role in the infection cycle of Fusarium graminearum because ascospores are the primary inoculum. As a homothallic ascomycete, F. graminearum contains both the MAT1-1 and MAT1-2-1 loci in the genome. To better understand their functions and regulations in sexual reproduction and pathogenesis, in this study we assayed the expression, interactions, and mutant phenotypes of individual MAT locus genes. Whereas the expression of MAT1-1-1 and MAT12-1 rapidly increased after perithecial induction and began to decline after 1 day post-perithecial induction (dpi), the expression of MAT1-1-2 and MAT1-1-3 peaked at 4 dpi. MAT1-1-2 and MAT1-1-3 had a similar expression profile and likely are controlled by a bidirectional promoter. Although none of the MAT locus genes were essential for perithecium formation, all of them were required for ascosporogenesis in self-crosses. In outcrosses, the mat11-1-2 and mat11-1-3 mutants were fertile but the mat1-1-1 and mat1-2-1 mutants displayed male- and female-specific defects, respectively. The mat1-2-1 mutant was reduced in FgSO expression and hyphal fusion. Mat1-1-2 interacted with all other MAT locus transcription factors, suggesting that they may form a protein complex during sexual reproduction. Mat1-1-1 also interacted with FgMcm1, which may play a role in controlling cell identity and sexual development. Interestingly, the mat1-1-1 and mat1-2-1 mutants were reduced in virulence in corn stalk rot assays although none of the MAT locus genes was important for wheat infection. The MAT1-1-1 and MAT1-2-1 genes may play a host-specific role in colonization of corn stalks.

  15. Electrospun graphene-ZnO nanofiber mats for photocatalysis applications

    NASA Astrophysics Data System (ADS)

    An, Seongpil; Joshi, Bhavana N.; Lee, Min Wook; Kim, Na Young; Yoon, Sam S.

    2014-03-01

    Graphene-decorated zinc oxide (G-ZnO) nanofibers were fabricated, for the first time, by electrospinning. The effect of graphene concentration on the properties of G-ZnO mats were investigated by scanning electron microscopy, X-ray diffraction, Raman spectroscopy, and thermo gravimetric analysis. The G-ZnO mats decorated with 0.5 wt.% of graphene showed excellent photocatalytic activity through degradation of methylene blue under UV irradiation. The highest photocatalytic activity (80% degradation) was observed for 0.5 wt.% G-ZnO mats annealed at 400 °C after 4 h of UV irradiation.

  16. Protocyanobacteria: Oxygenic and Anoxygenic photosynthesis in mat-forming bacteria

    NASA Technical Reports Server (NTRS)

    Cohen, Y.

    1985-01-01

    The oldest record of life is preserved in prePhanerozoic stromatolites dated 3500 million years old and is most likely of filamentous mat-forming cyanobacteria. The sedimentary records of cyanobacterial mats in stromatolites are the most abundant record of life throughout the prePhanerozoic. Stromatolites persisted into the Phanerozoic Eon, yet they become much less pronounced relative to earlier ones. The abundance and persistence of cyanobacterial mats throughout most of geological time point to the evolutionary success of these kinds of microbial communities and their possible role in the evolution of the earth and atmosphere.

  17. Water flow and solute transport in floating fen root mats

    NASA Astrophysics Data System (ADS)

    Stofberg, Sija F.; EATM van der Zee, Sjoerd

    2015-04-01

    Floating fens are valuable wetlands, found in North-Western Europe, that are formed by floating root mats when old turf ponds are colonized by plants. These terrestrialization ecosystems are known for their biodiversity and the presence of rare plant species, and the root mats reveal different vegetation zones at a small scale. The vegetation zones are a result of strong gradients in abiotic conditions, including groundwater dynamics, nutrients and pH. To prevent irreversible drought effects such as land subsidence and mineralization of peat, water management involves import of water from elsewhere to maintain constant surface water levels. Imported water may have elevated levels of salinity during dry summers, and salt exposure may threaten the vegetation. To assess the risk of exposure of the rare plant species to salinity, the hydrology of such root mats must be understood. Physical properties of root mats have scarcely been investigated. We have measured soil characteristics, hydraulic conductivity, vertical root mat movement and groundwater dynamics in a floating root mat in the nature reserve Nieuwkoopse Plassen, in the Netherlands. The root mat mostly consists of roots and organic material, in which the soil has a high saturated water content, and strongly varies in its stage of decomposition. We have found a distinct negative correlation between degree of decomposition and hydraulic conductivity, similar to observations for bogs in the literature. Our results show that the relatively young, thin edge of the root mat that colonizes the surface water has a high hydraulic conductivity and floats in the surface water, resulting in very small groundwater fluctuations within the root mat. The older part of the root mat, that is connected to the deeper peat layers is hydrologically more isolated and the material has a lower conductivity. Here, the groundwater fluctuates strongly with atmospheric forcing. The zones of hydraulic properties and vegetation, appear to

  18. Fabrication and Formation Mechanism of Ag Nanoplate-Decorated Nanofiber Mats and Their Application in SERS.

    PubMed

    Jia, Peng; Chang, Jiao; Wang, Jianqiang; Zhang, Pan; Cao, Bing; Geng, Yuting; Wang, Xiuxing; Pan, Kai

    2016-01-01

    We report a new simple method to fabricate a highly active SERS substrate consisting of poly-m-phenylenediamine/polyacrylonitrile (PmPD/PAN) decorated with Ag nanoplates. The formation mechanism of Ag nanoplates is investigated. The synthetic process of the Ag nanoplate-decorated PmPD/PAN (Ag nanoplates@PmPD/PAN) nanofiber mats consists of the assembly of Ag nanoparticles on the surface of PmPD/PAN nanofibers as crystal nuclei followed by in situ growth of Ag nanoparticles exclusively into nanoplates. Both the reducibility of the polymer and the concentration of AgNO3 are found to play important roles in the formation and the density of Ag nanoplates. The optimized Ag nanoplates@PmPD/PAN nanofiber mats exhibit excellent activity and reproducibility in surface-enhanced Raman scattering (SERS) detection of 4-mercaptobenzoic acid (4-MBA) with a detection limit of 10(-10)  m, making the Ag nanoplates@PmPD/PAN nanofiber mats a promising substrate for SERS detection of chemical molecules. In addition, this work also provides a design and fabrication process for a 3D SERS substrate made of a reducible polymer with noble metals.

  19. Tracking the Effect of Algal Mats on Coral Bleaching Using Remote Sensing

    NASA Astrophysics Data System (ADS)

    El-Askary, H. M.; Johnson, S. H.; Idris, N.; Qurban, M. A. B.

    2014-12-01

    Benthic habitats rely on relatively stable environmental conditions for survival. The introduction of algal mats into an ecosystem can have a notable effect on the livelihood of organisms such as coral reefs by causing changes in the biogeochemistry of the surrounding water. Increasing levels of acidity and new competition for sunlight caused by congregations of cyanobacteria essentially starve coral reefs of natural resources. These changes are particularly prevalent in waters near quickly developing population centers, such as the ecologically diverse Arabian Gulf. While ground-truthing studies to determine the extensiveness of coral death proves useful on a microcosmic level, new ventures in remote sensing research allow scientists to utilize satellite data to track these changes on a broader scale. Satellite images acquired from Landsat 5, 1987, Landsat 7, 2000, and Landsat 8, 2013 along with higher resolution IKONOS data are digitally analyzed in order to create spectral libraries for relevant benthic types, which in turn can be used to perform supervised classifications and change detection analyses over a larger area. The supervised classifications performed over the three scenes show five significant marine-related classes, namely coral, mangroves, macro-algae, and seagrass, in different degrees of abundance, yet here we focus only on the algal mats impact on corals bleaching. The change detection analysis is introduced to study see the degree of algal mats impact on coral bleaching over the course of time with possible connection to the local meteorology and current climate scenarios.

  20. Electrospinning strategies of drug-incorporated nanofibrous mats for wound recovery.

    PubMed

    Choi, Ji Suk; Kim, Hye Sung; Yoo, Hyuk Sang

    2015-04-01

    Electrospun nanofibrous mats have recently been employed as drug reservoirs for their unique features, such as high surface-to-volume ratios and easy fabrication process. We describe herein various methods of fabricating drug- and gene-encapsulated nanofibrous meshes, which can be prepared by electrospinning. The electrospinning process of nanofibrous mats is affected by many parameters, including viscosity and ejection speeds of the polymeric solutions and the electrical potential applied to the system. Both single- and dual-nozzle systems are widely employed in the preparation of electrospun nanofibers encapsulating drugs and genes, which are usually incorporated into the electrospun mats either by physical mixing with polymeric solutions before electrospinning or by physical incorporation after electrospinning. Various strategies have been tailored to maintain the bioactivity of proteins for tissue regeneration before and after electrospinning. Nucleic acids, such as DNA and siRNA, are also incorporated into nanofibrous meshes to enhance tissue regeneration by expressing transgenes or silencing domestic genes in specific tissues. Drug- or gene-incorporated nanofibrous meshes can greatly increase tissue regeneration rates and reduce scar formation in normal and diabetic wounds. Hybrid nanofibers, with multiple cell layers or hydrogels, have also been used to improve wound healing efficiency by increasing cell infiltration.

  1. Microbial mats and the early evolution of life

    NASA Technical Reports Server (NTRS)

    Des Marais, D. J.

    1990-01-01

    Microbial mats have descended from perhaps the oldest and most widespread biological communities known. Mats harbor microbes that are crucial for studies of bacterial phylogeny and physiology. They illustrate how several oxygen-sensitive biochemical processes have adapted to oxygen, and they show how life adapted to dry land long before the rise of plants. The search for the earliest grazing protists and metazoa in stromatolites is aided by observations of mats: in them, organic compounds characteristic of ancient photosynthetic protists can be identified. Recent mat studies suggest that the 13C/12C increase observed over geological time in stromatolitic organic matter was driven at least in part by a long-term decline in atmospheric carbon dioxide levels.

  2. BIOGEOCHEMICAL STUDIES OF PHOTOSYNTHETIC MICROBIAL MATS AND THEIR BIOTA

    NASA Technical Reports Server (NTRS)

    DesMarais, David; Discipulo, M.; Turk, K.; Londry, K. L.

    2005-01-01

    Photosynthetic microbial mats offer an opportunity to define holistic functionality at the millimeter scale. At the same time. their biogeochemistry contributes to environmental processes on a planetary scale. These mats are possibly direct descendents of the most ancient biological communities; communities in which oxygenic photosynthesis might have been invented. Mats provide one of the best natural systems to study how microbial populations associate to control dynamic biogeochemical gradients. These are self- sustaining, complete ecosystems in which light energy absorbed over a dial (24 hour) cycle drives the synthesis of spatially-organized, diverse biomass. Tightly-coupled microorganisms in the mat have specialized metabolisms that catalyze transformations of carbon, nitrogen, sulfur, and a host of other elements.

  3. A Modular Sensorized Mat for Monitoring Infant Posture

    PubMed Central

    Donati, Marco; Cecchi, Francesca; Bonaccorso, Filippo; Branciforte, Marco; Dario, Paolo; Vitiello, Nicola

    2014-01-01

    We present a novel sensorized mat for monitoring infant's posture through the measure of pressure maps. The pressure-sensitive mat is based on an optoelectronic technology developed in the last few years at Scuola Superiore Sant'Anna: a soft silicone skin cover, which constitutes the mat, participates in the transduction principle and provides the mat with compliance. The device has a modular structure (with a minimum of one and a maximum of six sub-modules, and a total surface area of about 1 m2) that enables dimensional adaptation of the pressure-sensitive area to different specific applications. The system consists of on-board electronics for data collection, pre-elaboration, and transmission to a remote computing unit for analysis and posture classification. In this work we present a complete description of the sensing apparatus along with its experimental characterization and validation with five healthy infants. PMID:24385029

  4. Microbial mats and modern stromatolites in Shark Bay, Western Australia

    NASA Technical Reports Server (NTRS)

    Golubic, S.

    1985-01-01

    Distribution, external morphology, texture, and microbial composition of microbial mats in Hamelin Pool, Shark Bay, Western Australia, have been studied and reviewed along a composite representative profile starting from the permanently submerged zone, across the zones of periodic flooding, toward permanently emerged land and coastal dunes. The following nine types of algal mats have been recognized: colloform, gelatinous, smooth, pincushion, tufted, mamillate, film, reticulate, and blister. Solar ponds represent a particular environment. The mat types represent microbial communities that are characterized by one or more dominant microorganisms. The colonization and stabilization of loose sediment is carried out by a microbial assemblage of generalists that prepare the ground for later replacement and succession by specialized microflora. Lithification of microbial mats takes place periodically, mainly during the austral summer. This process is destructive for the microbial community but increases the preservation potential of the stromatolitic structures.

  5. The MATS satellite mission - tomographic perspectives on the mesosphere

    NASA Astrophysics Data System (ADS)

    Christensen, Ole Martin; Gumbel, Jörg; Megner, Linda; Murtagh, Donal P.; Ivchenko, Nickolay

    2016-04-01

    MATS (Mesospheric Airglow/Aerosol Tomography and Spectroscopy) is a Swedish satellite mission scheduled for launch in 2019. MATS science focuses on mesospheric wave activity and noctilucent clouds. Primary measurement targets are O2 Atmospheric band dayglow and nightglow in the near infrared (759-767 nm) and sunlight scattered from noctilucent clouds in the ultraviolet (270-300 nm). While tomography provides horizontally and vertically resolved data, spectroscopy allows analysis in terms of mesospheric composition, temperature and cloud properties. During 2015, the design of the MATS instrument was finalized, and the first complete instrument design will be shown in this presentation. As a part of this work, simulated measurements were performed and inverted using a 3 dimensional tomographic algorithm based on the optimal estimation method. As a result, the first quantitative estimation of the instruments capabilities and performance figures can now be presented, and hence give a more accurate picture of the scientific opportunities that the MATS mission provides.

  6. Biosphere/atmosphere CO2 exchange in tundra ecosystems - Community characteristics and relationships with multispectral surface reflectance

    NASA Technical Reports Server (NTRS)

    Whiting, Gary J.; Bartlett, David S.; Fan, Song-Miao; Bakwin, Peter S.; Wofsy, Steven C.

    1992-01-01

    CO2 exchange rates were measured at selected tundra sites near Bethel, Alaska using portable, climate-controlled, instrumented enclosures. The empirically modeled exchange rate for a representative area of vegetated tundra was 1.2 +/- 1.2 g/sq m/d, compared to a tower-measured exchange over the same time period of 1.1 +.0- 1.2 g/sq m/d. Net exchange in response to varying light levels was compared to wet meadow and dry upland tundra, and to the net exchange measured by the micrometeoroidal tower technique. The multispectral reflectance properties of the sites were measured and related to exchange rates in order to provide a quantitative foundation for the use of satellite remote sensing to monitor biosphere/atmosphere CO2 exchange in the tundra biome.

  7. Biosphere/atmosphere CO[sub 2] exchange in tundra ecosystems - community characteristics and relationships with multispectral surface reflectance

    SciTech Connect

    Whiting, G.J.; Bartlett, D.S.; Fan, Songmiao; Bakwin, P.S.; Wofsy, S.C. New Hampshire Univ., Durham Harvard Univ., Cambridge, MA )

    1992-10-01

    CO2 exchange rates were measured at selected tundra sites near Bethel, Alaska using portable, climate-controlled, instrumented enclosures. The empirically modeled exchange rate for a representative area of vegetated tundra was 1.2 +/- 1.2 g/sq m/d, compared to a tower-measured exchange over the same time period of 1.1 +.0- 1.2 g/sq m/d. Net exchange in response to varying light levels was compared to wet meadow and dry upland tundra, and to the net exchange measured by the micrometeoroidal tower technique. The multispectral reflectance properties of the sites were measured and related to exchange rates in order to provide a quantitative foundation for the use of satellite remote sensing to monitor biosphere/atmosphere CO[sub 2] exchange in the tundra biome. 28 refs.

  8. The biogeochemistry of microbial mats, stromatolites and the ancient biosphere

    NASA Technical Reports Server (NTRS)

    Desmarais, D. J.; Canfield, D. E.

    1991-01-01

    Stromatolites offer an unparalleled geologic record of early life, because they constitute the oldest and most abundant recognizable remains of microbial ecosystems. Microbial mats are living homologs of stromatolites; thus, the physiology of the microbiota as well as the processes which create those features of mats (e.g., biomarker organic compounds, elemental and stable isotopic compositions) which are preserved in the ancient record. Observations of the carbon isotopic composition (delta C-13) of stromatolites and microbial mats were made and are consistent with the hypothesis that atmospheric CO2 concentrations have declined by at least one to two orders of magnitude during the past 2.5 Ga. Whereas delta C-13 values of carbonate carbon average about 0 permil during both the early and mid-Proterozoic, the delta C-13 values of stromatolitic organic matter increase from an average of -35 between 2.0 and 2.6 Ga ago to an average of about -28 about 1.0 Ga ago. Modern microbial mats in hypersaline environments have delta C-13 values typically in the range of -5 to -9, relative to an inorganic bicarbonate source at 0 permil. Both microbial mats and pur cultures of cyanobacteria grown in waters in near equilibrium with current atmospheric CO2 levels exhibit minimal discrimination against C-13. In contrast, hot spring cyanobacterial mats or cyanobacterial cultures grown under higher CO2 levels exhibit substantially greater discrimination. If care is taken to compare modern mats with stromatolites from comparable environments, it might be possible to estimate ancient levels of atmospheric CO2. In modern microbial mats, a tight coupling exists between photosynthetic organic carbon production and subsequent carbon oxidation, mostly by sulfate reduction. The rate of one process fuels a high rate of the other, with much of the sulfate reduction occurring within the same depth interval as oxygenic photosynthesis. Other aspects of this study are presented.

  9. Nitrification and Nitrifying Bacteria in a Coastal Microbial Mat

    PubMed Central

    Fan, Haoxin; Bolhuis, Henk; Stal, Lucas J.

    2015-01-01

    The first step of nitrification, the oxidation of ammonia to nitrite, can be performed by ammonia-oxidizing archaea (AOA) or ammonium-oxidizing bacteria (AOB). We investigated the presence of these two groups in three structurally different types of coastal microbial mats that develop along the tidal gradient on the North Sea beach of the Dutch barrier island Schiermonnikoog. The abundance and transcription of amoA, a gene encoding for the alpha subunit of ammonia monooxygenase that is present in both AOA and AOB, were assessed and the potential nitrification rates in these mats were measured. The potential nitrification rates in the three mat types were highest in autumn and lowest in summer. AOB and AOA amoA genes were present in all three mat types. The composition of the AOA and AOB communities in the mats of the tidal and intertidal stations, based on the diversity of amoA, were similar and clustered separately from the supratidal microbial mat. In all three mats AOB amoA genes were significantly more abundant than AOA amoA genes. The abundance of neither AOB nor AOA amoA genes correlated with the potential nitrification rates, but AOB amoA transcripts were positively correlated with the potential nitrification rate. The composition and abundance of amoA genes seemed to be partly driven by salinity, ammonium, temperature, and the nitrate/nitrite concentration. We conclude that AOB are responsible for the bulk of the ammonium oxidation in these coastal microbial mats. PMID:26648931

  10. Antifouling Electrospun Nanofiber Mats Functionalized with Polymer Zwitterions.

    PubMed

    Kolewe, Kristopher W; Dobosz, Kerianne M; Rieger, Katrina A; Chang, Chia-Chih; Emrick, Todd; Schiffman, Jessica D

    2016-10-06

    In this study, we exploit the excellent fouling resistance of polymer zwitterions and present electrospun nanofiber mats surface functionalized with poly(2-methacryloyloxyethyl phosphorylcholine) (polyMPC). This zwitterionic polymer coating maximizes the accessibility of the zwitterion to effectively limit biofouling on nanofiber membranes. Two facile, scalable methods yielded a coating on cellulose nanofibers: (i) a two-step sequential deposition featuring dopamine polymerization followed by the physioadsorption of polyMPC, and (ii) a one-step codeposition of polydopamine (PDA) with polyMPC. While the sequential and codeposited nanofiber mat assemblies have an equivalent average fiber diameter, hydrophilic contact angle, surface chemistry, and stability, the topography of nanofibers prepared by codeposition were smoother. Protein and microbial antifouling performance of the zwitterion modified nanofiber mats along with two controls, cellulose (unmodified) and PDA coated nanofiber mats were evaluated by dynamic protein fouling and prolonged bacterial exposure. Following 21 days of exposure to bovine serum albumin, the sequential nanofiber mats significantly resisted protein fouling, as indicated by their 95% flux recovery ratio in a water flux experiment, a 300% improvement over the cellulose nanofiber mats. When challenged with two model microbes Escherichia coli and Staphylococcus aureus for 24 h, both zwitterion modifications demonstrated superior fouling resistance by statistically reducing microbial attachment over the two controls. This study demonstrates that, by decorating the surfaces of chemically and mechanically robust cellulose nanofiber mats with polyMPC, we can generate high performance, free-standing nanofiber mats that hold potential in applications where antifouling materials are imperative, such as tissue engineering scaffolds and water purification technologies.

  11. Le matérialisme scientifique

    NASA Astrophysics Data System (ADS)

    Meunier, Jean-François

    2004-03-01

    De nos jours, il arrive quotidiennement aux grands hommes d'avoir à fréquenter d'ignorants mortels épris d'une conviction maladive que la science est la grande responsable de tous les maux du monde. Évidemment sans physique atomique, il n'y aurait pas eu d'Hiroshima et sans révolution industrielle, pas de pollution et etc. Cependant, ces accusations envers le progrès technique sont tout à fait injustes, irréfléchies et, j'irai même jusqu'à dire, irresponsables, puisque le calcul, i.e. la planification, même la plus élémentaire, est ce qui caractérise le mieux, pragmatiquement, la société humaine. À mon avis, les problèmes sociaux tireraient plutôt leur origine de sciences sociales irréalistes, qui, concrètment, inspireraient ou serviraient d'alibis à ceux qui détiennent véritablement le pouvoir. Dans cet article, je tenterai donc de démontrer la meilleure véracité et efficacité du matérialisme scientifique. Cette doctrine, dont Mario Bunge est le plus illustre représentant, s'appuy sur les résultats théoriques et expérimentaux des sciences factuelles ainsi que sur l'exactitude logique des mathématiques, utilisées ici comme langage universel de l'expression des idées. Cette conception philosophique qui s'inspire principalement du modèle des théories physiques, stipule que les réalités sociales sont, comme tout autre réalité, matérielles, mathématisables et représentables comme des systèmes en interaction. En fait, le modèle des physiciens ayant historiquement fait ses preuves en matière de testabilité et de cohérence interne est proposé d'être appliquer aux sciences sociales, aujourd'hui scindées des sciences dites pures sous l'inspiration des pseudo penseurs néo-kantiens, phénoménologiques et post-moderne. Cette nouvelle approche permettrait ainsi d'évoluer plus exactement vers une compréhension des bases sociales et biologiques du comportement humain afin de développer une éthique sans cesse plus r

  12. The effect of a permafrost disturbance on growing-season carbon-dioxide fluxes in a high Arctic tundra ecosystem

    NASA Astrophysics Data System (ADS)

    Cassidy, Alison E.; Christen, Andreas; Henry, Gregory H. R.

    2016-04-01

    Soil carbon stored in high-latitude permafrost landscapes is threatened by warming and could contribute significant amounts of carbon to the atmosphere and hydrosphere as permafrost thaws. Thermokarst and permafrost disturbances, especially active layer detachments and retrogressive thaw slumps, are present across the Fosheim Peninsula, Ellesmere Island, Canada. To determine the effects of retrogressive thaw slumps on net ecosystem exchange (NEE) of CO2 in high Arctic tundra, we used two eddy covariance (EC) tower systems to simultaneously and continuously measure CO2 fluxes from a disturbed site and the surrounding undisturbed tundra. During the 32-day measurement period in the 2014 growing season, the undisturbed tundra was a small net sink (NEE = -0.1 g C m-2 d-1); however, the disturbed terrain of the retrogressive thaw slump was a net source (NEE = +0.4 g C m-2 d-1). Over the measurement period, the undisturbed tundra sequestered 3.8 g C m-2, while the disturbed tundra released 12.5 g C m-2. Before full leaf-out in early July, the undisturbed tundra was a small source of CO2 but shifted to a sink for the remainder of the sampling season (July), whereas the disturbed tundra remained a source of CO2 throughout the season. A static chamber system was also used to measure daytime fluxes in the footprints of the two towers, in both disturbed and undisturbed tundra, and fluxes were partitioned into ecosystem respiration (Re) and gross primary production (GPP). Average GPP and Re found in disturbed tundra were smaller (+0.40 µmol m-2 s-1 and +0.55 µmol m-2 s-1, respectively) than those found in undisturbed tundra (+1.19 µmol m-2 s-1 and +1.04 µmol m-2 s-1, respectively). Our measurements indicated clearly that the permafrost disturbance changed the high Arctic tundra system from a sink to a source for CO2 during the majority of the growing season (late June and July).

  13. The effect of a permafrost disturbance on growing-season carbon-dioxide fluxes in a high Arctic tundra ecosystem

    NASA Astrophysics Data System (ADS)

    Cassidy, A. E.; Christen, A.; Henry, G. H. R.

    2015-12-01

    Soil carbon stored in high-latitude permafrost landscapes is threatened by warming, and could contribute significant amounts of carbon to the atmosphere and hydrosphere as permafrost thaws. Permafrost disturbances, especially active layer detachments and retrogressive thaw slumps, have increased in frequency and magnitude across the Fosheim Peninsula, Ellesmere Island, Canada. To determine the effects of retrogressive thaw slumps on net ecosystem exchange (NEE) of CO2 in high Arctic tundra, we used two eddy covariance (EC) tower systems to simultaneously and continuously measure CO2 fluxes from a disturbed site and the surrounding undisturbed tundra. During the 32-day measurement period in the 2014 growing season the undisturbed tundra was a small net sink (NEE = -0.12 g C m-2 d-1); however, the disturbed terrain of the retrogressive thaw slump was a net source (NEE = +0.39 g C m-2 d-1). Over the measurement period, the undisturbed tundra sequestered 3.84 g C m-2, while the disturbed tundra released 12.48 g C m-2. Before full leaf out in early July, the undisturbed tundra was a small source of CO2, but shifted to a sink for the remainder of the sampling season (July), whereas the disturbed tundra remained a source of CO2 throughout the season. A static chamber system was also used to measure fluxes in the footprints of the two towers, in both disturbed and undisturbed tundra, and fluxes were partitioned into ecosystem respiration (Re) and gross primary production (GPP). Average GPP and Re found in disturbed tundra were smaller (+0.41 μmol m-2 s-1 and +0.50 μmol m-2 s-1, respectively) than those found in undisturbed tundra (+1.21 μmol m-2 s-1 and +1.00 μmol m-2 s-1, respectively). Our measurements indicated clearly that the permafrost disturbance changed the high Arctic tundra system from a sink to a source for CO2 during the growing season.

  14. The cyanobacterium Mastigocladus fulfills the nitrogen demand of a terrestrial hot spring microbial mat

    PubMed Central

    Estrella Alcamán, María; Fernandez, Camila; Delgado, Antonio; Bergman, Birgitta; Díez, Beatriz

    2015-01-01

    Cyanobacteria from Subsection V (Stigonematales) are important components of microbial mats in non-acidic terrestrial hot springs. Despite their diazotrophic nature (N2 fixers), their impact on the nitrogen cycle in such extreme ecosystems remains unknown. Here, we surveyed the identity and activity of diazotrophic cyanobacteria in the neutral hot spring of Porcelana (Northern Patagonia, Chile) during 2009 and 2011–2013. We used 16S rRNA and the nifH gene to analyze the distribution and diversity of diazotrophic cyanobacteria. Our results demonstrate the dominance of the heterocystous genus Mastigocladus (Stigonematales) along the entire temperature gradient of the hot spring (69–38 °C). In situ nitrogenase activity (acetylene reduction), nitrogen fixation rates (cellular uptake of 15N2) and nifH transcription levels in the microbial mats showed that nitrogen fixation and nifH mRNA expression were light-dependent. Nitrogen fixation activities were detected at temperatures ranging from 58 °C to 46 °C, with maximum daily rates of 600 nmol C2H4 cm−2 per day and 94.1 nmol N cm−2 per day. These activity patterns strongly suggest a heterocystous cyanobacterial origin and reveal a correlation between nitrogenase activity and nifH gene expression during diurnal cycles in thermal microbial mats. N and C fixation in the mats contributed ~3 g N m−2 per year and 27 g C m−2 per year, suggesting that these vital demands are fully met by the diazotrophic and photoautotrophic capacities of the cyanobacteria in the Porcelana hot spring. PMID:26230049

  15. Microbial Diversity in Sediment Ecosystems (Evaporites Domes, Microbial Mats, and Crusts) of Hypersaline Laguna Tebenquiche, Salar de Atacama, Chile.

    PubMed

    Fernandez, Ana B; Rasuk, Maria C; Visscher, Pieter T; Contreras, Manuel; Novoa, Fernando; Poire, Daniel G; Patterson, Molly M; Ventosa, Antonio; Farias, Maria E

    2016-01-01

    We combined nucleic acid-based molecular methods, biogeochemical measurements, and physicochemical characteristics to investigate microbial sedimentary ecosystems of Laguna Tebenquiche, Atacama Desert, Chile. Molecular diversity, and biogeochemistry of hypersaline microbial mats, rhizome-associated concretions, and an endoevaporite were compared with: The V4 hypervariable region of the 16S rRNA gene was amplified by pyrosequencing to analyze the total microbial diversity (i.e., bacteria and archaea) in bulk samples, and in addition, in detail on a millimeter scale in one microbial mat and in one evaporite. Archaea were more abundant than bacteria. Euryarchaeota was one of the most abundant phyla in all samples, and particularly dominant (97% of total diversity) in the most lithified ecosystem, the evaporite. Most of the euryarchaeal OTUs could be assigned to the class Halobacteria or anaerobic and methanogenic archaea. Planctomycetes potentially also play a key role in mats and rhizome-associated concretions, notably the aerobic organoheterotroph members of the class Phycisphaerae. In addition to cyanobacteria, members of Chromatiales and possibly the candidate family Chlorotrichaceae contributed to photosynthetic carbon fixation. Other abundant uncultured taxa such as the candidate division MSBL1, the uncultured MBGB, and the phylum Acetothermia potentially play an important metabolic role in these ecosystems. Lithifying microbial mats contained calcium carbonate precipitates, whereas endoevoporites consisted of gypsum, and halite. Biogeochemical measurements revealed that based on depth profiles of O2 and sulfide, metabolic activities were much higher in the non-lithifying mat (peaking in the least lithified systems) than in lithifying mats with the lowest activity in endoevaporites. This trend in decreasing microbial activity reflects the increase in salinity, which may play an important role in the biodiversity.

  16. Microbial Diversity in Sediment Ecosystems (Evaporites Domes, Microbial Mats, and Crusts) of Hypersaline Laguna Tebenquiche, Salar de Atacama, Chile

    PubMed Central

    Fernandez, Ana B.; Rasuk, Maria C.; Visscher, Pieter T.; Contreras, Manuel; Novoa, Fernando; Poire, Daniel G.; Patterson, Molly M.; Ventosa, Antonio; Farias, Maria E.

    2016-01-01

    We combined nucleic acid-based molecular methods, biogeochemical measurements, and physicochemical characteristics to investigate microbial sedimentary ecosystems of Laguna Tebenquiche, Atacama Desert, Chile. Molecular diversity, and biogeochemistry of hypersaline microbial mats, rhizome-associated concretions, and an endoevaporite were compared with: The V4 hypervariable region of the 16S rRNA gene was amplified by pyrosequencing to analyze the total microbial diversity (i.e., bacteria and archaea) in bulk samples, and in addition, in detail on a millimeter scale in one microbial mat and in one evaporite. Archaea were more abundant than bacteria. Euryarchaeota was one of the most abundant phyla in all samples, and particularly dominant (97% of total diversity) in the most lithified ecosystem, the evaporite. Most of the euryarchaeal OTUs could be assigned to the class Halobacteria or anaerobic and methanogenic archaea. Planctomycetes potentially also play a key role in mats and rhizome-associated concretions, notably the aerobic organoheterotroph members of the class Phycisphaerae. In addition to cyanobacteria, members of Chromatiales and possibly the candidate family Chlorotrichaceae contributed to photosynthetic carbon fixation. Other abundant uncultured taxa such as the candidate division MSBL1, the uncultured MBGB, and the phylum Acetothermia potentially play an important metabolic role in these ecosystems. Lithifying microbial mats contained calcium carbonate precipitates, whereas endoevoporites consisted of gypsum, and halite. Biogeochemical measurements revealed that based on depth profiles of O2 and sulfide, metabolic activities were much higher in the non-lithifying mat (peaking in the least lithified systems) than in lithifying mats with the lowest activity in endoevaporites. This trend in decreasing microbial activity reflects the increase in salinity, which may play an important role in the biodiversity. PMID:27597845

  17. Methane Production by Microbial Mats Under Low Sulfate Concentrations

    NASA Technical Reports Server (NTRS)

    Bebout, Brad M.; Hoehler, Tori M.; Thamdrup, Bo; Albert, Dan; Carpenter, Steven P.; Hogan, Mary; Turk, Kendra; DesMarais, David J.

    2003-01-01

    Cyanobacterial mats collected in hypersaline salterns were incubated in a greenhouse under low sulfate concentrations ([SO4]) and examined for their primary productivity and emissions of methane and other major carbon species. Atmospheric greenhouse warming by gases such as carbon dioxide and methane must have been greater during the Archean than today in order to account for a record of moderate to warm paleoclemates, despite a less luminous early sun. It has been suggested that decreased levels of oxygen and sulfate in Archean oceans could have significantly stimulated microbial methanogenesis relative to present marine rates, with a resultant increase in the relative importance of methane in maintaining the early greenhouse. We maintained modern microbial mats, models of ancient coastal marine communities, in artificial brine mixtures containing both modern [SO4=] (ca. 70 mM) and "Archean" [SO4] (less than 0.2 mM). At low [SO4], primary production in the mats was essentially unaffected, while rates of sulfate reduction decreased by a factor of three, and methane fluxes increased by up to ten-fold. However, remineralization by methanogenesis still amounted to less than 0.4 % of the total carbon released by the mats. The relatively low efficiency of conversion of photosynthate to methane is suggested to reflect the particular geometry and chemical microenvironment of hypersaline cyanobacterial mats. Therefore, such mats w-ere probably relatively weak net sources of methane throughout their 3.5 Ga history, even during periods of low- environmental levels oxygen and sulfate.

  18. Invasive algal mats degrade coral reef physical habitat quality

    NASA Astrophysics Data System (ADS)

    Martinez, Jonathan A.; Smith, Celia M.; Richmond, Robert H.

    2012-03-01

    Invasive species alter the ecology of marine ecosystems through a variety of mechanisms or combination of mechanisms. This study documented critical physical parameters altered by the invasive red macroalga Gracilaria salicornia in situ, including: reduced irradiance, increased sedimentation, and marked variation in diurnal dissolved oxygen and pH cycles in Kāne'ohe Bay, O'ahu, Hawai'i. Paired studies showed that algal mats reduced irradiance by 99% and doubled sediment accumulation. Several mats developed hypoxia and hyperoxia in the extreme minima and maxima, though there was no statistical difference detected in the mean or the variability of dissolved oxygen between different 30 min time points of 24 h cycles between algal mat-open reef pairs. The algal mat significantly acidified the water under the algal mat by decreasing pH by 0.10-0.13 pH units below open reef pH. A minimum of pH 7.47 occurred between 14 and 19 h after sunrise. Our combined results suggest that mats of G. salicornia can alter various physical parameters on a fine scale and time course not commonly detected. These changes in parameters give insight into the underlying basis for negative impact, and suggest new ways in which the presence of invasive species leads to decline of coral reef ecosystems.

  19. Cyanobacterial reuse of extracellular organic carbon in microbial mats

    PubMed Central

    Stuart, Rhona K; Mayali, Xavier; Lee, Jackson Z; Craig Everroad, R; Hwang, Mona; Bebout, Brad M; Weber, Peter K; Pett-Ridge, Jennifer; Thelen, Michael P

    2016-01-01

    Cyanobacterial organic matter excretion is crucial to carbon cycling in many microbial communities, but the nature and bioavailability of this C depend on unknown physiological functions. Cyanobacteria-dominated hypersaline laminated mats are a useful model ecosystem for the study of C flow in complex communities, as they use photosynthesis to sustain a more or less closed system. Although such mats have a large C reservoir in the extracellular polymeric substances (EPSs), the production and degradation of organic carbon is not well defined. To identify extracellular processes in cyanobacterial mats, we examined mats collected from Elkhorn Slough (ES) at Monterey Bay, California, for glycosyl and protein composition of the EPS. We found a prevalence of simple glucose polysaccharides containing either α or β (1,4) linkages, indicating distinct sources of glucose with differing enzymatic accessibility. Using proteomics, we identified cyanobacterial extracellular enzymes, and also detected activities that indicate a capacity for EPS degradation. In a less complex system, we characterized the EPS of a cyanobacterial isolate from ES, ESFC-1, and found the extracellular composition of biofilms produced by this unicyanobacterial culture were similar to that of natural mats. By tracing isotopically labeled EPS into single cells of ESFC-1, we demonstrated rapid incorporation of extracellular-derived carbon. Taken together, these results indicate cyanobacteria reuse excess organic carbon, constituting a dynamic pool of extracellular resources in these mats. PMID:26495994

  20. Photosynthate Partitioning and Fermentation in Hot Spring Microbial Mat Communities

    PubMed Central

    Nold, S. C.; Ward, D. M.

    1996-01-01

    Patterns of (sup14)CO(inf2) incorporation into molecular components of the thermophilic cyanobacterial mat communities inhabiting hot springs located in Yellowstone National Park and Synechococcus sp. strain C1 were investigated. Exponentially growing Synechococcus sp. strain C1 partitioned the majority of incorporated (sup14)CO(inf2) into protein, low-molecular-weight metabolites, and lipid fractions (45, 22, and 18% of total incorporated carbon, respectively). In contrast, mat cores from various hot springs predominantly accumulated polyglucose during periods of illumination (between 77 and 85% of total incorporated (sup14)CO(inf2)). Although photosynthetically active, mat photoautotrophs do not appear to be rapidly growing, since we also detected only limited synthesis of macromolecules associated with growth (i.e., protein and rRNA). To test the hypothesis that polysaccharide reserves are fermented in situ under the dark anaerobic conditions cyanobacterial mats experience at night, mat cores were prelabeled with (sup14)CO(inf2) under illuminated conditions and then transferred to dark anaerobic conditions. Radiolabel in the polysaccharide fraction decreased by 74.7% after 12 h, of which 58.5% was recovered as radiolabeled acetate, CO(inf2), and propionate. These results indicate tightly coupled carbon fixation and fermentative processes and the potential for significant transfer of carbon from primary producers to heterotrophic members of these cyanobacterial mat communities. PMID:16535472

  1. Mechanical behavior of ultralong multiwalled carbon nanotube mats

    NASA Astrophysics Data System (ADS)

    Deck, Christian P.; Flowers, Jason; McKee, Gregg S. B.; Vecchio, Kenneth

    2007-01-01

    Carbon nanotubes (CNTs) have been a subject of great interest partially due to their potential for exceptional material properties. Improvements in synthesis methods have facilitated the production of ultralong CNT mats, with lengths in the millimeter range. The increased length of these ultralong mats has, in return, opened the way to greater flexibility to probe their mechanical response. In this work, mats of dense, well-aligned, multiwalled carbon nanotubes were grown with a vapor-phase chemical vapor deposition technique using ferrocene and benzene as reactants, and subsequently tested in both tension and compression using two methods, in a thermomechanical analyzer and in situ inside a scanning electron microscope. In compression, measured stiffness was very low, due to buckling of the nanotubes. In tension, the nanotube mats behaved considerably stiffer; however, they were still more compliant than expected for nanotubes (˜1TPa). Analysis of both the growth method used and the nanotube mat fracture surface suggests that the mats grown in this method are not composed of continuous nanotubes and their strengths actually closely match those of woven nanotube yarns and ropes.

  2. Response of a tundra ecosystem to elevated atmospheric carbon dioxide and CO sub 2 -induced climate change

    SciTech Connect

    Oechel, W.C.

    1992-04-01

    This report presents the progress on the DOE funded project: Response of a Tundra Ecosystem to Elevated Atmospheric Carbon Dioxide and CO{sub 2}-Induced Climate Change.'' The current funding cycle was initiated on September 1, 1989, to run through August 31, 1992. There was an initial reduction in scope dictated by budget availabilities, primarily manipulations of CO{sub 2}, temperature and nutrients at a wet tundra located at Barrow Alaska. These experiments still need to be done over the mid- to longer term in order to accurately predict, apriori, the effects of climate change on the arctic tundra as well as possible feedbacks. Coordination and cooperation with other agencies was initiated in 1990 and formally proposed in our 1991 renewal at the national and international level and has become an important aspect of the research. To accurately and precisely scale plot and transect measurements to the circumpolar tundra is beyond the scope of the current DOE project. It is possible, however to determine the patterns and controls of CO{sub 2} flux from the current circumpolar arctic tundra with the involvement of additional agencies and governments. Results from the past two years of this project confirm that the arctic has become a source of CO{sub 2} to the atmosphere. This change coincides with recent climatic variation in the arctic, and suggest a positive feedback of arctic ecosystems on atmospheric CO{sub 2} and global change. Measurements along a latitudinal gradient across the north slope of Alaska indicate a loss of carbon from tussock tundra and wet tundra, decreasing in magnitude along a decreasing gradient of temperature but an increasing gradient in soil moisture. These data are in agreement with work done on tussock tundra in 1983{endash}85 and 1987.

  3. Response of a tundra ecosystem to elevated atmospheric carbon dioxide and CO{sub 2}-induced climate change. Progress report

    SciTech Connect

    Oechel, W.C.

    1992-04-01

    This report presents the progress on the DOE funded project: ``Response of a Tundra Ecosystem to Elevated Atmospheric Carbon Dioxide and CO{sub 2}-Induced Climate Change.`` The current funding cycle was initiated on September 1, 1989, to run through August 31, 1992. There was an initial reduction in scope dictated by budget availabilities, primarily manipulations of CO{sub 2}, temperature and nutrients at a wet tundra located at Barrow Alaska. These experiments still need to be done over the mid- to longer term in order to accurately predict, apriori, the effects of climate change on the arctic tundra as well as possible feedbacks. Coordination and cooperation with other agencies was initiated in 1990 and formally proposed in our 1991 renewal at the national and international level and has become an important aspect of the research. To accurately and precisely scale plot and transect measurements to the circumpolar tundra is beyond the scope of the current DOE project. It is possible, however to determine the patterns and controls of CO{sub 2} flux from the current circumpolar arctic tundra with the involvement of additional agencies and governments. Results from the past two years of this project confirm that the arctic has become a source of CO{sub 2} to the atmosphere. This change coincides with recent climatic variation in the arctic, and suggest a positive feedback of arctic ecosystems on atmospheric CO{sub 2} and global change. Measurements along a latitudinal gradient across the north slope of Alaska indicate a loss of carbon from tussock tundra and wet tundra, decreasing in magnitude along a decreasing gradient of temperature but an increasing gradient in soil moisture. These data are in agreement with work done on tussock tundra in 1983{endash}85 and 1987.

  4. The Pleistocene ``Tundra-Steppe'' and the productivity paradox: the landscape approach

    NASA Astrophysics Data System (ADS)

    Yurtsev, Boris A.

    2001-01-01

    "Tundra-steppe" means either a certain type of plant community with codominance of both steppe and tundra species (including prostrate shrubs), or a type of landscape, codominated by both steppe and tundra (Yurtsev, Relic Steppe Complexes of Northeastern Asia. Nauka Press, Novosibirsk (in Russian) 1981; In: Hopkins, Matthews Jr., Schweger, Young, (Eds.), Paleoecology of Beringia. Academic Press, New York, 1982, pp. 157-177). A discrepancy between Pleistocene glacial climates that were much colder and drier than present in Beringia and the highly diverse herbivorous fossil fauna (the "productivity paradox") is explained in terms of much greater diversity of herbaceous vegetation (grasses, sedges and forbs) in the mosaic of Beringian 'tundra-steppe' landscapes. Analysis of the relic distribution of some predominantly herbaceous plant communities throughout Beringia (Yurtsev, 1981, 1982, Komarovskiye chteniya (Vladivostok) 33 (1986) 3-53 (in Russian); Protection of Gene- and Coenotic Pool of the Herbaceous Biogeocoenoses, Sverdlovsk, 1988, pp. 128-129 (in Russian); Bridges of Science Between North America and the Russian Far East, 45th Arctic Science Conference, Abstracts, Vol. 1. Dalnauka Press, Vladivostok, 1994, p. 268; Paleontological Journal, 6 (1996)) provides the phytogeographic and landscape — ecological grounds for the reconstruction of plant cover of these landscapes. Dry watersheds and slopes had cryophytic (cold-adapted) steppes, cryoxerophytic (cold and dry-adapted) herbaceous and prostrate shrub-herbaceous communities, dry herb-prostrate shrub tundras, and tundra-steppe communities proper. All sorts of depressions on interfluves and in valleys along with concave pediments were occupied by dry steppe-meadows and brackish-water moist meadows. In some specific habitats sparse groupings of continental halophytes (plants growing in saline soils) of "arctic takkyrs", zoochoric (plants with seeds dispersed by animals) groupings of annual-biennial "ruderals

  5. Modeling the spatiotemporal variability in subsurface thermal regimes across a low-relief polygonal tundra landscape

    SciTech Connect

    Kumar, Jitendra; Collier, Nathan; Bisht, Gautam; Mills, Richard T.; Thornton, Peter E.; Iversen, Colleen M.; Romanovsky, Vladimir

    2016-09-27

    Vast carbon stocks stored in permafrost soils of Arctic tundra are under risk of release to the atmosphere under warming climate scenarios. Ice-wedge polygons in the low-gradient polygonal tundra create a complex mosaic of microtopographic features. This microtopography plays a critical role in regulating the fine-scale variability in thermal and hydrological regimes in the polygonal tundra landscape underlain by continuous permafrost. Modeling of thermal regimes of this sensitive ecosystem is essential for understanding the landscape behavior under the current as well as changing climate. Here, we present an end-to-end effort for high-resolution numerical modeling of thermal hydrology at real-world field sites, utilizing the best available data to characterize and parameterize the models. We also develop approaches to model the thermal hydrology of polygonal tundra and apply them at four study sites near Barrow, Alaska, spanning across low to transitional to high-centered polygons, representing a broad polygonal tundra landscape. A multiphase subsurface thermal hydrology model (PFLOTRAN) was developed and applied to study the thermal regimes at four sites. Using a high-resolution lidar digital elevation model (DEM), microtopographic features of the landscape were characterized and represented in the high-resolution model mesh. The best available soil data from field observations and literature were utilized to represent the complex heterogeneous subsurface in the numerical model. Simulation results demonstrate the ability of the developed modeling approach to capture – without recourse to model calibration – several aspects of the complex thermal regimes across the sites, and provide insights into the critical role of polygonal tundra microtopography in regulating the thermal dynamics of the carbon-rich permafrost soils. Moreover, areas of significant disagreement between model results and observations highlight the importance of field

  6. Modeling the spatiotemporal variability in subsurface thermal regimes across a low-relief polygonal tundra landscape

    DOE PAGES

    Kumar, Jitendra; Collier, Nathan; Bisht, Gautam; ...

    2016-09-27

    Vast carbon stocks stored in permafrost soils of Arctic tundra are under risk of release to the atmosphere under warming climate scenarios. Ice-wedge polygons in the low-gradient polygonal tundra create a complex mosaic of microtopographic features. This microtopography plays a critical role in regulating the fine-scale variability in thermal and hydrological regimes in the polygonal tundra landscape underlain by continuous permafrost. Modeling of thermal regimes of this sensitive ecosystem is essential for understanding the landscape behavior under the current as well as changing climate. Here, we present an end-to-end effort for high-resolution numerical modeling of thermal hydrology at real-world fieldmore » sites, utilizing the best available data to characterize and parameterize the models. We also develop approaches to model the thermal hydrology of polygonal tundra and apply them at four study sites near Barrow, Alaska, spanning across low to transitional to high-centered polygons, representing a broad polygonal tundra landscape. A multiphase subsurface thermal hydrology model (PFLOTRAN) was developed and applied to study the thermal regimes at four sites. Using a high-resolution lidar digital elevation model (DEM), microtopographic features of the landscape were characterized and represented in the high-resolution model mesh. The best available soil data from field observations and literature were utilized to represent the complex heterogeneous subsurface in the numerical model. Simulation results demonstrate the ability of the developed modeling approach to capture – without recourse to model calibration – several aspects of the complex thermal regimes across the sites, and provide insights into the critical role of polygonal tundra microtopography in regulating the thermal dynamics of the carbon-rich permafrost soils. Moreover, areas of significant disagreement between model results and observations highlight the importance of field

  7. Long-term recovery patterns of arctic tundra after winter seismic exploration.

    PubMed

    Jorgenson, Janet C; Ver Hoef, Jay M; Jorgenson, M T

    2010-01-01

    In response to the increasing global demand for energy, oil exploration and development are expanding into frontier areas of the Arctic, where slow-growing tundra vegetation and the underlying permafrost soils are very sensitive to disturbance. The creation of vehicle trails on the tundra from seismic exploration for oil has accelerated in the past decade, and the cumulative impact represents a geographic footprint that covers a greater extent of Alaska's North Slope tundra than all other direct human impacts combined. Seismic exploration for oil and gas was conducted on the coastal plain of the Arctic National Wildlife Refuge, Alaska, USA, in the winters of 1984 and 1985. This study documents recovery of vegetation and permafrost soils over a two-decade period after vehicle traffic on snow-covered tundra. Paired permanent vegetation plots (disturbed vs. reference) were monitored six times from 1984 to 2002. Data were collected on percent vegetative cover by plant species and on soil and ground ice characteristics. We developed Bayesian hierarchical models, with temporally and spatially autocorrelated errors, to analyze the effects of vegetation type and initial disturbance levels on recovery patterns of the different plant growth forms as well as soil thaw depth. Plant community composition was altered on the trails by species-specific responses to initial disturbance and subsequent changes in substrate. Long-term changes included increased cover of graminoids and decreased cover of evergreen shrubs and mosses. Trails with low levels of initial disturbance usually improved well over time, whereas those with medium to high levels of initial disturbance recovered slowly. Trails on ice-poor, gravel substrates of riparian areas recovered better than those on ice-rich loamy soils of the uplands, even after severe initial damage. Recovery to pre-disturbance communities was not possible where trail subsidence occurred due to thawing of ground ice. Previous studies of

  8. Efficacy of different treatment regimes against setariosis (Setaria tundra, Nematoda: Filarioidea) and associated peritonitis in reindeer

    PubMed Central

    Laaksonen, Sauli; Oksanen, Antti; Orro, Toomas; Norberg, Harri; Nieminen, Mauri; Sukura, Antti

    2008-01-01

    Background When a severe peritonitis outbreak in semi-domesticated reindeer was noticed in 2003 in Finland, the concerned industry urged immediate preventive actions in order to avoid detrimental effects of S. tundra and further economical losses. A research programme was swiftly initiated to study S. tundra and its impact on the health and wellbeing of reindeer. Methods The ultimate aim of this study was to test the efficacy of different treatment regimes against S. tundra and associated peritonitis in reindeer. The timing of the trials was planned to be compatible with the annual rhythm of the reindeer management; (1) the treatment of calves in midsummer, during routine calf ear marking, with ivermectin injection prophylaxis and deltamethrin pour-on solution as a repellent against insect vectors, (2) the treatment of infected calves in early autumn with ivermectin injection, and (3) ivermectin treatment of breeding reindeer in winter. The results were assessed using the post mortem inspection data and S. tundra detection. Finally, to evaluate on the population level the influence of the annual (late autumn-winter) ivermectin treatment of breeding reindeer on the transmission dynamics of S. tundra, a questionnaire survey was conducted. Results In autumn, ivermectin treatment was efficient against peritonitis and in midsummer had a slight negative impact on the degree of peritonitis and positive on the fat layer, but deltamethrin had none. Ivermectin was efficient against adult S. tundra and its smf. All the reindeer herding cooperatives answered the questionnaire and it appeared that antiparasitic treatment of reindeer population was intense during the study period, when 64–90% of the animals were treated. In the southern part of the Finnish reindeer husbandry area, oral administration of ivermectin was commonly used. Conclusion Autumn, and to a lesser degree summer, treatment of reindeer calves with injectable ivermectin resulted in decreased severity of

  9. Tundra fire alters stream water chemistry and benthic invertebrate communities, North Slope, Alaska

    NASA Astrophysics Data System (ADS)

    Allen, A. R.; Bowden, W. B.; Kling, G. W.; Schuett, E.; Kostrzewski, J. M.; Kolden Abatzoglou, C.; Findlay, R. H.

    2010-12-01

    Increased fire frequency and severity are potentially important consequences of climate change in high latitude ecosystems. The 2007 Anaktuvuk River fire, which burned from July until October, is the largest recorded tundra fire from Alaska's north slope (≈1,000 km2). The immediate effects of wildfire on water chemistry and biotic assemblages in tundra streams are heretofore unknown. We hypothesized that a tundra fire would increase inorganic nutrient inputs to P-limited tundra streams, increasing primary production and altering benthic macroinvertebrate community structure. We examined linkages among: 1) percentage of riparian zone and overall watershed vegetation burned, 2) physical, chemical and biological stream characteristics, and 3) macroinvertebrate communities in streams draining burned and unburned watersheds during the summers of 2008 and 2009. Streams in burned watersheds contained higher mean concentrations of soluble reactive phosphorus (SRP), ammonium (NH4+), and dissolved organic carbon (DOC). In contrast, stream nitrate (NO3-) concentrations were lower in burned watersheds. The net result was that the tundra fire did not affect concentrations of dissolved inorganic nitrogen (NH4+ + NO3-). In spite of increased SRP, benthic chlorophyll-a biomass was not elevated. Macroinvertebrate abundances were 1.5 times higher in streams draining burned watersheds; Chironomidae midges, Nematodes, and Nemoura stoneflies showed the greatest increases in abundance. Multivariate multiple regression identified environmental parameters associated with the observed changes in the macroinvertebrate communities. Since we identified stream latitude as a significant predictor variable, latitude was included in the model as a covariate. After removing the variation associated with latitude, 67.3 % of the variance in macroinvertebrate community structure was explained by a subset of 7 predictor variables; DOC, conductivity, mean temperature, NO3-, mean discharge, SRP and NH

  10. Regulation of electron transfer processes affects phototrophic mat structure and activity

    PubMed Central

    Ha, Phuc T.; Renslow, Ryan S.; Atci, Erhan; Reardon, Patrick N.; Lindemann, Stephen R.; Fredrickson, James K.; Call, Douglas R.; Beyenal, Haluk

    2015-01-01

    Phototrophic microbial mats are among the most diverse ecosystems in nature. These systems undergo daily cycles in redox potential caused by variations in light energy input and metabolic interactions among the microbial species. In this work, solid electrodes with controlled potentials were placed under mats to study the electron transfer processes between the electrode and the microbial mat. The phototrophic microbial mat was harvested from Hot Lake, a hypersaline, epsomitic lake located near Oroville (Washington, USA). We operated two reactors: graphite electrodes were polarized at potentials of -700 mVAg/AgCl [cathodic (CAT) mat system] and +300 mVAg/AgCl [anodic (AN) mat system] and the electron transfer rates between the electrode and mat were monitored. We observed a diel cycle of electron transfer rates for both AN and CAT mat systems. Interestingly, the CAT mats generated the highest reducing current at the same time points that the AN mats showed the highest oxidizing current. To characterize the physicochemical factors influencing electron transfer processes, we measured depth profiles of dissolved oxygen (DO) and sulfide in the mats using microelectrodes. We further demonstrated that the mat-to-electrode and electrode-to-mat electron transfer rates were light- and temperature-dependent. Using nuclear magnetic resonance (NMR) imaging, we determined that the electrode potential regulated the diffusivity and porosity of the microbial mats. Both porosity and diffusivity were higher in the CAT mats than in the AN mats. We also used NMR spectroscopy for high-resolution quantitative metabolite analysis and found that the CAT mats had significantly higher concentrations of osmoprotectants such as betaine and trehalose. Subsequently, we performed amplicon sequencing across the V4 region of the 16S rRNA gene of incubated mats to understand the impact of electrode potential on microbial community structure. These data suggested that variation in the

  11. [Characteristics of erythrocyte lipids in blood of tundra voles (Microtus oeconomus Pall.) inhabiting areas with increased natural radioactivity].

    PubMed

    Shevchenko, O G; Shuktomova, I I; Shishkina, L N

    2011-01-01

    Interrelations between the lipid characteristics of the blood erythrocytes and 226Ra accumulation in the body of tundra voles (Microtus oeconomus Pall.) inhabiting areas with different levels of the radiation background were investigated. It is shown that the ratio of the phospholipid (PL) fractions which cause the blood erythrocyte structure depends on the phase of the population cycle, as well as on the sex and age of tundra voles. The statistically significant interrelation between lysoforms and the sphingomielin content has been revealed in the blood erythrocyte PL of tundra voles; its scale somewhat differs for the animals from the reference and Ra areas. The peroxide concentration in the blood erythrocyte lipids of tundra voles from the Ra area exceeded the control values in all mature groups of the animals trapped at the depression phase of the population density. The 226Ra content in the bodies of the tundra voles which were trapped in the Ra area at the increased phase of the population cycle is for certain higher than that for the animals from the reference area. Interrelations between the lipid peroxidation parameters in the blood erythrocytes and the body 226Ra content for separate sex-age groups of tundra voles have been revealed.

  12. Response of rhizosphere soil microbial to Deyeuxia angustifolia encroaching in two different vegetation communities in alpine tundra.

    PubMed

    Li, Lin; Xing, Ming; Lv, Jiangwei; Wang, Xiaolong; Chen, Xia

    2017-02-21

    Deyeuxia angustifolia (Komarov) Y. L Chang is an herb species originating from the birch forests in the Changbai Mountain. Recently, this species has been found encroaching into large areas in the western slopes of the alpine tundra in the Changbai Mountain, threatening the tundra ecosystem. In this study, we systematically assessed the response of the rhizosphere soil microbial to D. angustifolia encroaching in alpine tundra by conducting experiments for two vegetation types (shrubs and herbs) by real-time PCR and Illumina Miseq sequencing methods. The treatments consisted of D. angustifolia sites (DA), native sites (NS, NH) and encroaching sites (ES, EH). Our results show that (1) Rhizosphere soil properties of the alpine tundra were significantly impacted by D. angustifolia encroaching; microbial nutrient cycling and soil bacterial communities were shaped to be suitable for D. angustifolia growth; (2) The two vegetation community rhizosphere soils responded differently to D. angustifolia encroaching; (3) By encroaching into both vegetation communities, D. angustifolia could effectively replace the native species by establishing positive plant-soil feedback. The strong adaptation and assimilative capacity contributed to D. angustifolia encroaching in the alpine tundra. Our research indicates that D. angustifolia significantly impacts the rhizosphere soil microbial of the alpine tundra.

  13. Response of rhizosphere soil microbial to Deyeuxia angustifolia encroaching in two different vegetation communities in alpine tundra

    NASA Astrophysics Data System (ADS)

    Li, Lin; Xing, Ming; Lv, Jiangwei; Wang, Xiaolong; Chen, Xia

    2017-02-01

    Deyeuxia angustifolia (Komarov) Y. L Chang is an herb species originating from the birch forests in the Changbai Mountain. Recently, this species has been found encroaching into large areas in the western slopes of the alpine tundra in the Changbai Mountain, threatening the tundra ecosystem. In this study, we systematically assessed the response of the rhizosphere soil microbial to D. angustifolia encroaching in alpine tundra by conducting experiments for two vegetation types (shrubs and herbs) by real-time PCR and Illumina Miseq sequencing methods. The treatments consisted of D. angustifolia sites (DA), native sites (NS, NH) and encroaching sites (ES, EH). Our results show that (1) Rhizosphere soil properties of the alpine tundra were significantly impacted by D. angustifolia encroaching; microbial nutrient cycling and soil bacterial communities were shaped to be suitable for D. angustifolia growth; (2) The two vegetation community rhizosphere soils responded differently to D. angustifolia encroaching; (3) By encroaching into both vegetation communities, D. angustifolia could effectively replace the native species by establishing positive plant-soil feedback. The strong adaptation and assimilative capacity contributed to D. angustifolia encroaching in the alpine tundra. Our research indicates that D. angustifolia significantly impacts the rhizosphere soil microbial of the alpine tundra.

  14. Response of rhizosphere soil microbial to Deyeuxia angustifolia encroaching in two different vegetation communities in alpine tundra

    PubMed Central

    Li, Lin; Xing, Ming; Lv, Jiangwei; Wang, Xiaolong; Chen, Xia

    2017-01-01

    Deyeuxia angustifolia (Komarov) Y. L Chang is an herb species originating from the birch forests in the Changbai Mountain. Recently, this species has been found encroaching into large areas in the western slopes of the alpine tundra in the Changbai Mountain, threatening the tundra ecosystem. In this study, we systematically assessed the response of the rhizosphere soil microbial to D. angustifolia encroaching in alpine tundra by conducting experiments for two vegetation types (shrubs and herbs) by real-time PCR and Illumina Miseq sequencing methods. The treatments consisted of D. angustifolia sites (DA), native sites (NS, NH) and encroaching sites (ES, EH). Our results show that (1) Rhizosphere soil properties of the alpine tundra were significantly impacted by D. angustifolia encroaching; microbial nutrient cycling and soil bacterial communities were shaped to be suitable for D. angustifolia growth; (2) The two vegetation community rhizosphere soils responded differently to D. angustifolia encroaching; (3) By encroaching into both vegetation communities, D. angustifolia could effectively replace the native species by establishing positive plant-soil feedback. The strong adaptation and assimilative capacity contributed to D. angustifolia encroaching in the alpine tundra. Our research indicates that D. angustifolia significantly impacts the rhizosphere soil microbial of the alpine tundra. PMID:28220873

  15. The impact of climate change on ecosystem carbon dynamics at the Scandinavian mountain birch forest-tundra heath ecotone.

    PubMed

    Sjögersten, Sofie; Wookey, Philip A

    2009-02-01

    Changes in temperature and moisture resulting from climate change are likely to strongly modify the ecosystem carbon sequestration capacity in high-latitude areas, both through vegetation shifts and via direct warming effects on photosynthesis and decomposition. This paper offers a synthesis of research addressing the potential impacts of climate warming on soil processes and carbon fluxes at the forest-tundra ecotone in Scandinavia. Our results demonstrated higher rates of organic matter decomposition in mountain birch forest than in tundra heath soils, with markedly shallower organic matter horizons in the forest. Field and laboratory experiments suggest that increased temperatures are likely to increase CO2 efflux from both tundra and forest soil providing moisture availability does not become limiting for the decomposition process. Furthermore, colonization of tundra heath by mountain birch forest would increase rates of decomposition, and thus CO2 emissions, from the tundra heath soils, which currently store substantial amounts of potentially labile carbon. Mesic soils underlying both forest and tundra heath are currently weak sinks of atmospheric methane, but the strength of this sink could be increased with climate warming and/or drying.

  16. The dynamics of the tundra-taiga boundary: an overview and suggested coordinated and integrated approach to research.

    PubMed

    Callaghan, Terry V; Crawford, Robert M M; Eronen, Matti; Hofgaard, Annika; Payette, Serge; Rees, W Gareth; Skre, Oddvar; Sveinbjörnsson, Bjartmar; Vlassova, Tatiana K; Werkman, Ben R

    2002-08-01

    The tundra-taiga boundary stretches for more than 13,400 km around the Northern Hemisphere and is probably the Earth's greatest vegetation transition. The trees that define the boundary have been sensitive to climate changes in the past and models of future vegetation distribution suggest a rapid and dramatic invasion of the tundra by the taiga. Such changes would generate both positive and negative feedbacks to the climate system and the balance could result in a net warming effect. However, the boundary is becoming increasingly affected by human activities that remove trees and degrade forest-tundra into tundra-like areas. Because of the vastness and remoteness of the tundra-taiga boundary, and of methodological problems such as problematic definitions and lack of standardized methods to record the location and characteristics of the ecotone, a project group has been established under the auspices of the International Arctic Science Committee (IASC). This paper summarizes the initial output of the group and focuses on our uncertainties in understanding the current processes at the tundra-taiga boundary and the conflicts between model predictions of changes in the location of the boundary and contrasting recently observed changes due to human activities. Finally, we present recommendations for a coordinated international approach to the problem and invite the international community to join us in reducing the uncertainties about the dynamics of the ecotone and their consequences.

  17. ERB master archival tape specification no. T 134081 ERB MAT, revision 1

    NASA Technical Reports Server (NTRS)

    1984-01-01

    The Earth radiation budget (ERB)MAT tapes are generated by the ERB MATGEN software using the IBM 3081 computer system operated by the Science and Applications Computer Center at Goddard Space Flight Center. All MAT's are 9-track and MAT data are in ascending time order. The gross tape format for NIMBUS year-1 and year-2 MAT's is different from the format of MAT's starting with year-3. The MATs from the first two years are to contain one day's worth of data while all other MATs are to contain multiple day's worth of data stacked onto the tapes.

  18. Morphology and properties of the soils of permafrost peatlands in the southeast of the Bol'shezemel'skaya tundra

    NASA Astrophysics Data System (ADS)

    Kaverin, D. A.; Pastukhov, A. V.; Lapteva, E. M.; Biasi, C.; Marushchak, M.; Martikainen, P.

    2016-05-01

    The morphology and properties of the soils of permafrost peatlands in the southeast of the Bol'shezemel'skaya tundra are characterized. The soils developing in the areas of barren peat circles differ from oligotrophic permafrost-affected peat soils (Cryic Histosols) of vegetated peat mounds in a number of morphological and physicochemical parameters. The soils of barren circles are characterized by the wellstructured surface horizons, relatively low exchangeable acidity, and higher rates of decomposition and humification of organic matter. It is shown that the development of barren peat circles on tops of peat mounds is favored by the activation of erosional and cryogenic processes in the topsoil. The role of winter wind erosion in the destruction of the upper peat and litter horizons is demonstrated. A comparative analysis of the temperature regime of soils of vegetated peat mounds and barren peat circles is presented. The soil-geocryological complex of peat mounds is a system consisting of three major layers: seasonally thawing layer-upper permafrost-underlying permafrost. The upper permafrost horizons of peat mounds at the depth of 50-90 cm are morphologically similar to the underlying permafrost. However, these layers differ in their physicochemical properties, especially in the composition and properties of their organic matter.

  19. Inter-annual variability of NDVI in response to long-term warming and fertilization in wet sedge and tussock tundra.

    PubMed

    Boelman, Natalie T; Stieglitz, Marc; Griffin, Kevin L; Shaver, Gaius R

    2005-05-01

    This study explores the relationship between the normalized difference vegetation index (NDVI) and aboveground plant biomass for tussock tundra vegetation and compares it to a previously established NDVI-biomass relationship for wet sedge tundra vegetation. In addition, we explore inter-annual variation in NDVI in both these contrasting vegetation communities. All measurements were taken across long-term experimental treatments in wet sedge and tussock tundra communities at the Toolik Lake Long Term Ecological Research (LTER) site, in northern Alaska. Over 15 years (for wet sedge tundra) and 14 years (for tussock tundra), N and P were applied in factorial experiments (N, P and N+P), air temperature was increased using greenhouses with and without N+P fertilizer, and light intensity was reduced by 50% using shade cloth. during the peak growing seasons of 2001, 2002, and 2003, NDVI measurements were made in both the wet sedge and tussock tundra experimental treatment plots, creating a 3-year time series of inter-annual variation in NDVI. We found that: (1) across all tussock experimental tundra treatments, NDVI is correlated with aboveground plant biomass (r2 = 0.59); (2) NDVI-biomass relationships for tussock and wet sedge tundra communities are community specific, and; (3) NDVI values for tussock tundra communities are typically, but not always, greater than for wet sedge tundra communities across all experimental treatments. We suggest that differences between the response of wet sedge and tussock tundra communities in the same experimental treatments result from the contrasting degree of heterogeneity in species and functional types that characterize each of these Arctic tundra vegetation communities.

  20. Photosynthetic Microbial Mats are Exemplary Sources of Diverse Biosignatures (Invited)

    NASA Astrophysics Data System (ADS)

    Des Marais, D. J.; Jahnke, L. L.

    2013-12-01

    Marine cyanobacterial microbial mats are widespread, compact, self-contained ecosystems that create diverse biosignatures and have an ancient fossil record. Within the mats, oxygenic photosynthesis provides organic substrates and O2 to the community. Both the absorption and scattering of light change the intensity and spectral composition of incident radiation as it penetrates a mat. Some phototrophs utilize infrared light near the base of the photic zone. A mat's upper layers can become highly reduced and sulfidic at night. Counteracting gradients of O2 and sulfide shape the chemical environment and provide daily-contrasting microenvironments separated on a scale of a few mm. Radiation hazards (UV, etc.), O2 and sulfide toxicity elicit motility and other physiological responses. This combination of benefits and hazards of light, O2 and sulfide promotes the allocation of various essential mat processes between light and dark periods and to various depths in the mat. Associated nonphotosynthetic communities, including anaerobes, strongly influence many of the ecosystem's overall characteristics, and their processes affect any biosignatures that enter the fossil record. A biosignature is an object, substance and/or pattern whose origin specifically requires a biological agent. The value of a biosignature depends not only on the probability of life creating it, but also on the improbability of nonbiological processes producing it. Microbial mats create biosignatures that identify particular groups of organisms and also reveal attributes of the mat ecosystem. For example, branched hydrocarbons and pigments can be diagnostic of cyanobacteria and other phototrophic bacteria, and isoprenoids can indicate particular groups of archea. Assemblages of lipid biosignatures change with depth due to changes in microbial populations and diagenetic transformations of organic matter. The 13C/12C values of organic matter and carbonates reflect isotopic discrimination by particular

  1. Sulphur cycling in a Neoarchaean microbial mat.

    PubMed

    Meyer, N R; Zerkle, A L; Fike, D A

    2017-01-27

    Multiple sulphur (S) isotope ratios are powerful proxies to understand the complexity of S biogeochemical cycling through Deep Time. The disappearance of a sulphur mass-independent fractionation (S-MIF) signal in rocks <~2.4 Ga has been used to date a dramatic rise in atmospheric oxygen levels. However, intricacies of the S-cycle before the Great Oxidation Event remain poorly understood. For example, the isotope composition of coeval atmospherically derived sulphur species is still debated. Furthermore, variation in Archaean pyrite δ(34) S values has been widely attributed to microbial sulphate reduction (MSR). While petrographic evidence for Archaean early-diagenetic pyrite formation is common, textural evidence for the presence and distribution of MSR remains enigmatic. We combined detailed petrographic and in situ, high-resolution multiple S-isotope studies (δ(34) S and Δ(33) S) using secondary ion mass spectrometry (SIMS) to document the S-isotope signatures of exceptionally well-preserved, pyritised microbialites in shales from the ~2.65-Ga Lokammona Formation, Ghaap Group, South Africa. The presence of MSR in this Neoarchaean microbial mat is supported by typical biogenic textures including wavy crinkled laminae, and early-diagenetic pyrite containing <26‰ μm-scale variations in δ(34) S and Δ(33) S = -0.21 ± 0.65‰ (±1σ). These large variations in δ(34) S values suggest Rayleigh distillation of a limited sulphate pool during high rates of MSR. Furthermore, we identified a second, morphologically distinct pyrite phase that precipitated after lithification, with δ(34) S = 8.36 ± 1.16‰ and Δ(33) S = 5.54 ± 1.53‰ (±1σ). We propose that the S-MIF signature of this secondary pyrite does not reflect contemporaneous atmospheric processes at the time of deposition; instead, it formed by the influx of later-stage sulphur-bearing fluids containing an inherited atmospheric S-MIF signal and/or from magnetic isotope effects during

  2. Tundra photosynthesis captured by satellite-observed solar-induced chlorophyll fluorescence

    NASA Astrophysics Data System (ADS)

    Luus, K. A.; Commane, R.; Parazoo, N. C.; Benmergui, J.; Euskirchen, E. S.; Frankenberg, C.; Joiner, J.; Lindaas, J.; Miller, C. E.; Oechel, W. C.; Zona, D.; Wofsy, S.; Lin, J. C.

    2017-02-01

    Accurately quantifying the timing and magnitude of respiration and photosynthesis by high-latitude ecosystems is important for understanding how a warming climate influences global carbon cycling. Data-driven estimates of photosynthesis across Arctic regions often rely on satellite-derived enhanced vegetation index (EVI); we find that satellite observations of solar-induced chlorophyll fluorescence (SIF) provide a more direct proxy for photosynthesis. We model Alaskan tundra CO2 cycling (2012-2014) according to temperature and shortwave radiation and alternately input EVI or SIF to prescribe the annual seasonal cycle of photosynthesis. We find that EVI-based seasonality indicates spring "green-up" to occur 9 days prior to SIF-based estimates, and that SIF-based estimates agree with aircraft and tower measurements of CO2. Adopting SIF, instead of EVI, for modeling the seasonal cycle of tundra photosynthesis can result in more accurate estimates of growing season duration and net carbon uptake by arctic vegetation.

  3. AmeriFlux US-ICh Imnavait Creek Watershed Heath Tundra

    DOE Data Explorer

    Bret-Harte, Syndonia [University of Alaska Fairbanks; Euskirchen, Eugenie [University of Alaska Fairbanks; Shaver, Gaius [Marine Biological Laboratory

    2016-01-01

    This is the AmeriFlux version of the carbon flux data for the site US-ICh Imnavait Creek Watershed Heath Tundra. Site Description - The Imnavait Creek Watershed Heath Tundra (Ridge Station) is located near Imnavait Creek in Alaska, north of the Brooks Range in the Kuparuk basin near Lake Toolik and the Toolik Field Station. The Kuparuk River has its headwaters in the Brooks Range and drains through northern Alaska into the Arctic Ocean. Within these headwaters lies the Imnavait basin at an average elevation of 930 m. Water tracks run down the hill in parallel zones with a spacing of approximately 10 m. The Ridge Station was deployed at the end of Summer 2007.

  4. Species differences in whole plant carbon balance following winter dormancy in Alaskan tundra plants

    SciTech Connect

    Bret-Harte, M.S.; Chapin, F.S. III

    1995-09-01

    We froze ramets of seven vascular plant species and a mixed community of mosses common to upland tussock tundra for several months, then measured whole-plant photosynthesis and respiration in a growth chamber under simulated spring conditions, to examine whole plant carbon metabolism following winter dormancy. In addition, respiration and photosynthesis of aboveground stems and leaves were measured in the field in a spatial gradient away from a melting snowbank, at comparable developmental stages. Species differences in early respiration were not pronounced, but large differences were seen once development of leaves began. Root development in deciduous shrubs delayed their attainment of a positive whole plant carbon balance compared to that seen in aboveground stems and leaves alone, and partially compensated for differences in photosynthetic rates between shrubs and other species. Temporal patterns of carbon metabolism during spring growth may affect competitive balance in tussock tundra and vegetation response to global change.

  5. Psychrotolerant actinomycetes of plants and organic horizons in tundra and taiga soils

    NASA Astrophysics Data System (ADS)

    Dubrova, M. S.; Zenova, G. M.; Yakushev, A. V.; Manucharova, N. A.; Makarova, E. P.; Zvyagintsev, D. G.; Chernov, I. Yu.

    2013-08-01

    It has been revealed that in organic horizons and plants of the tundra and taiga ecosystems under low temperatures, actinomycetal complexes form. The population density of psychrotolerant actinomycetes in organic horizons and plants reaches tens and hundreds of thousands CFU/g of substrate or soil, and decreases in the sequence litters > plants > soils > undecomposed plant remains > moss growths. The mycelium length of psychrotolerant actinomycetes reaches 220 m/g of substrate. Application of the FISH method has demonstrated that metabolically active psychrotolerant bacteria of the phylum Actinobacteria constitute 30% of all metabolically active psychrotolerant representatives of the Bacterià domain of the prokaryotic microbial community of soils and plants. Psychrotolerant actinomycetes in tundra and taiga ecosystems possess antimicrobial properties.

  6. Sequencing and analysis of the complete mitochondrial genome of tundra shrew (Sorex tundrensis) from China.

    PubMed

    Xu, Chunzhu; Zhao, Shuai; Wu, Hualin; Wu, Shengyang; Zhang, Zhongwen; Wang, Bo; Dou, Huashan

    2016-07-01

    The complete mitogenome sequence of tundra shrew (Sorex tundrensis) was determined using long PCR. The genome was 17,444 bp in length and contained 13 protein-coding genes, 2 ribosomal RNA genes, 23 transfer RNA genes, 1 origin of L strand replication and 1 control region. The overall base composition of the heavy strand is A (32.9%), C (24.8%), T (29.0%), and G (13.3%). The base compositions present clearly the A-T skew, which is most obviously in the control region and protein-coding genes. The extended termination-associated sequence domain, the central conserved domain and the conserved sequence block domain are defined in the mitochondrial genome control region of tundra shrew. Mitochondrial genome analyses based on MP, ML, NJ and Bayesian analyses yielded identical phylogenetic trees. The three Sorex species formed a monophyletic group with the high bootstrap value (100 %) in all examinations.

  7. Controls over nutrient flow through plants and microbes in Arctic tundra

    SciTech Connect

    Chapin, F.S. III.

    1991-01-01

    During 1990, we worked primarily on two major projects. The first was a field study of {sup 15}N partitioning between plants and microbes at Imnavait Creek. {sup 15}N was absorbed faster on the tundra than in temperate climates, and release of labeled nitrogen occurs much more slowly, indicating a slow turnover. The second major project was a model of nutrient uptake by {und Eriophorum vaginatum}. The major effort for 1991 will be on continued model development to match model predictions with results of current field work. Also scheduled for 1991 is completion of field work with {und E. vaginatum} and related soils. This should provide validation of the applicability of R4D concepts to anthropogenic disturbances in tundra. 5 figs. (MHB)

  8. The 1977 tundra fire in the Kokolik River area of Alaska

    NASA Technical Reports Server (NTRS)

    1981-01-01

    Presumably caused by lightning, a large fire occurred due east of Point Lay several kilometers southwest of the Kokolik River, the farthest north a fire was ever fought by Bureau of Land Management personnel in Alaska. The progress and area extent of the fire were determined by analysis of LANDSAT MSS band 5 and 7 imagery. Low altitude observations from helicopter showed the fire burned a range of vegetation and relief types which included low polygonized and upland tussock tundras. The burned area appeared wetter on the surface than the unburned area, due to a lack of moisture absorbing organic matter and the possible release of moisture from the deeper thawed zone. Suggestions for future investigations of the effects of fire on tundra and permafrost terrains are discussed.

  9. The modeled effects of fire on carbon balance and vegetation abundance in Alaskan tundra

    NASA Astrophysics Data System (ADS)

    Dietze, M. C.; Davidson, C. D.; Kelly, R.; Higuera, P. E.; Hu, F.

    2012-12-01

    Arctic climate is warming at a rate disproportionately faster than the rest of the world. Changes have been observed within the tundra that are attributed to this trend, including active layer thickening, shrub land expansion, and increases in fire frequency. Whether tundra remains a global net sink of carbon could depend upon the effects of fire on vegetation, specifically concerning the speed at which vegetation reestablishes, the stimulation of growth after fire, and the changes that occur in species composition during succession. While rapid regeneration of graminoid vegetation favors the spread of this functional type in early succession, late succession appears to favor shrub vegetation at abundances greater than those observed before fire. Possible reasons for this latter observation include changes in albedo, soil insulation, and soil moisture regimes. Here we investigate the course of succession after fire disturbance within tundra ecosystems, and the mechanisms involved. A series of simulated burn experiments were conducted on the burn site left by the 2007 Anaktuvuk River fire to access the behavior of the Ecosystem Demography model v2.2 (ED2) in the simulation of fire on the tundra. The land surface sub-model within ED is modified to improve simulate permafrost through the effects of an increased soil-column depth, a peat texture class, and the effects of wind compaction and depth hoar on snow density. Parameterization is conducted through Bayesian techniques used to constrain parameter distributions based upon data from a literature survey, field measurements at Toolik Lake, Alaska, and a data assimilation over three datasets. At each step, priority was assigned to measurements that could constrain parameters that account for the greatest explained variance in model output as determined through sensitivity analysis. Following parameterization, a series of simulations were performed to gauge the suitability of the model in predicting carbon balance and

  10. InSAR detects increase in surface subsidence caused by an Arctic tundra fire

    USGS Publications Warehouse

    Liu, Lin; Jafarov, Elchin E.; Schaefer, Kevin M.; Jones, Benjamin M.; Zebker, Howard A.; Williams, Christopher A.; Rogan, John; Zhang, Tingjun

    2014-01-01

    Wildfire is a major disturbance in the Arctic tundra and boreal forests, having a significant impact on soil hydrology, carbon cycling, and permafrost dynamics. This study explores the use of the microwave Interferometric Synthetic Aperture Radar (InSAR) technique to map and quantify ground surface subsidence caused by the Anaktuvuk River fire on the North Slope of Alaska. We detected an increase of up to 8 cm of thaw-season ground subsidence after the fire, which is due to a combination of thickened active layer and permafrost thaw subsidence. Our results illustrate the effectiveness and potential of using InSAR to quantify fire impacts on the Arctic tundra, especially in regions underlain by ice-rich permafrost. Our study also suggests that surface subsidence is a more comprehensive indicator of fire impacts on ice-rich permafrost terrain than changes in active layer thickness alone.

  11. AmeriFlux US-ICs Imnavait Creek Watershed Wet Sedge Tundra

    DOE Data Explorer

    Bret-Harte, Syndonia [University of Alaska Fairbanks; Euskirchen, Eugenie [University of Alaska Fairbanks; Shaver, Gaius [Marine Biological Laboratory

    2016-01-01

    This is the AmeriFlux version of the carbon flux data for the site US-ICs Imnavait Creek Watershed Wet Sedge Tundra. Site Description - The Imnavait Creek Watershed Wet Sedge Tundra (Fen Station) is located near Imnavait Creek in Alaska, north of the Brooks Range in the Kuparuk basin near Lake Toolik and the Toolik Field Station. The Kuparuk River has its headwaters in the Brooks Range and drains through northern Alaska into the Arctic Ocean. Within these headwaters lies the Imnavait basin at an average elevation of 930 m. Water tracks run down the hill in parallel zones with a spacing of approximately 10 m. The Fen Station was deployed at the end of Summer 2007.

  12. AmeriFlux US-ICt Imnavait Creek Watershed Tussock Tundra

    DOE Data Explorer

    Bret-Harte, Syndonia [University of Alaska Fairbanks; Euskirchen, Eugenie [University of Alaska Fairbanks; Shaver, Gaius [Marine Biological Laboratory

    2016-01-01

    This is the AmeriFlux version of the carbon flux data for the site US-ICt Imnavait Creek Watershed Tussock Tundra. Site Description - The Imnavait Creek Watershed Tussock Tundra (Biocomplexity Station) is located near Imnavait Creek in Alaska, north of the Brooks Range in the Kuparuk basin near Lake Toolik and the Toolik Field Station. The Kuparuk River has its headwaters in the Brooks Range and drains through northern Alaska into the Arctic Ocean. Within these headwaters lies the Imnavait basin at an average elevation of 930 m. Water tracks run down the hill in parallel zones with a spacing of approximately 10 m. The Biocomplexity Station was deployed in 2004, and it has been in operation during the melt seasons ever since.

  13. Large CO2 and CH4 emissions from polygonal tundra during spring thaw in northern Alaska

    NASA Astrophysics Data System (ADS)

    Raz-Yaseef, Naama; Torn, Margaret S.; Wu, Yuxin; Billesbach, Dave P.; Liljedahl, Anna K.; Kneafsey, Timothy J.; Romanovsky, Vladimir E.; Cook, David R.; Wullschleger, Stan D.

    2017-01-01

    The few prethaw observations of tundra carbon fluxes suggest that there may be large spring releases, but little is known about the scale and underlying mechanisms of this phenomenon. To address these questions, we combined ecosystem eddy flux measurements from two towers near Barrow, Alaska, with mechanistic soil-core thawing experiment. During a 2 week period prior to snowmelt in 2014, large fluxes were measured, reducing net summer uptake of CO2 by 46% and adding 6% to cumulative CH4 emissions. Emission pulses were linked to unique rain-on-snow events enhancing soil cracking. Controlled laboratory experiment revealed that as surface ice thaws, an immediate, large pulse of trapped gases is emitted. These results suggest that the Arctic CO2 and CH4 spring pulse is a delayed release of biogenic gas production from the previous fall and that the pulse can be large enough to offset a significant fraction of the moderate Arctic tundra carbon sink.

  14. Epicardial delivery of VEGF and cardiac stem cells guided by 3-dimensional PLLA mat enhancing cardiac regeneration and angiogenesis in acute myocardial infarction.

    PubMed

    Chung, Hye-Jin; Kim, Jong-Tae; Kim, Hee-Jung; Kyung, Hei-Won; Katila, Pramila; Lee, Jeong-Han; Yang, Tae-Hyun; Yang, Young-Il; Lee, Seung-Jin

    2015-05-10

    Congestive heart failure is mostly resulted in a consequence of the limited myocardial regeneration capacity after acute myocardial infarction. Targeted delivery of proangiogenic factors and/or stem cells to the ischemic myocardium is a promising strategy for enhancing their local and sustained therapeutic effects. Herein, we designed an epicardial delivery system of vascular endothelial growth factor (VEGF) and cardiac stem cells (CSCs) using poly(l-lactic acid) (PLLA) mat applied to the acutely infarcted myocardium. The fibrous VEGF-loaded PLLA mat was fabricated by an electrospinning method using PLLA solution emulsified VEGF. This mat not only allowed for sustained release of VEGF for 4weeks but boosted migration and proliferation of both endothelial cells and CSCs in vitro. Furthermore, sustained release of VEGF showed a positive effect on in vitro capillary-like network formation of endothelial cells compared with bolus treatment of VEGF. PLLA mat provided a permissive 3-dimensional (3D) substratum that led to spontaneous cardiomyogenic differentiation of CSCs in vitro. Notably, sustained stimulation by VEGF-loaded PLLA mat resulted in a substantial increase in the expression of proangiogenic mRNAs of CSCs in vitro. The epicardially implanted VEGF-loaded PLLA mat showed modest effects on angiogenesis and cardiomyogenesis in the acutely infarcted hearts. However, co-implantation of VEGF and CSCs using the PLLA mat showed meaningful therapeutic effects on angiogenesis and cardiomyogenesis compared with controls, leading to reduced cardiac remodeling and enhanced global cardiac function. Collectively, the PLLA mat allowed a smart cargo that enabled the sustained release of VEGF and the delivery of CSCs, thereby synergistically inducing angiogenesis and cardiomyogenesis in acute myocardial infarction.

  15. Distribution and activity of ice wedges across the forest-tundra transition, western Arctic Canada

    NASA Astrophysics Data System (ADS)

    Kokelj, S. V.; Lantz, T. C.; Wolfe, S. A.; Kanigan, J. C.; Morse, P. D.; Coutts, R.; Molina-Giraldo, N.; Burn, C. R.

    2014-09-01

    Remote sensing, regional ground temperature and ground ice observations, and numerical simulation were used to investigate the size, distribution, and activity of ice wedges in fine-grained mineral and organic soils across the forest-tundra transition in uplands east of the Mackenzie Delta. In the northernmost dwarf-shrub tundra, ice wedge polygons cover up to 40% of the ground surface, with the wedges commonly exceeding 3 m in width. The largest ice wedges are in peatlands where thermal contraction cracking occurs more frequently than in nearby hummocky terrain with fine-grained soils. There are fewer ice wedges, rarely exceeding 2 m in width, in uplands to the south and none have been found in mineral soils of the tall-shrub tundra, although active ice wedges are found there throughout peatlands. In the spruce forest zone, small, relict ice wedges are restricted to peatlands. At tundra sites, winter temperatures at the top of permafrost are lower in organic than mineral soils because of the shallow permafrost table, occurrence of phase change at 0°C, and the relatively high thermal conductivity of icy peat. Due to these factors and the high coefficient of thermal contraction of frozen saturated peat, ice wedge cracking and growth is more common in peatlands than in mineral soil. However, the high latent heat content of saturated organic active layer soils may inhibit freezeback, particularly where thick snow accumulates, making the permafrost and the ice wedges in spruce forest polygonal peatlands susceptible to degradation following alteration of drainage or climate warming.

  16. Potential enzyme activities altered by increased nutrient availability in Arctic tundra soils

    NASA Astrophysics Data System (ADS)

    Koyama, A.; Wallenstein, M. D.; Moore, J. C.; Simpson, R. T.

    2012-12-01

    The Arctic tundra is a biome affected most by global warming predicted in the future. Such warming is expected to increase nutrient availability to soil microbes which, in turn, may accelerate soil organic matter decomposition. We investigated how extra-cellular enzyme activities in soils were affected by increasing nutrient availability in an Arctic tundra ecosystem. Specifically, we measured potential activities of seven enzymes at three profiles (organic, organic/mineral interface, and mineral) of soils which had been fertilized in long- (23 years) and short-terms (six years), assayed at four temperatures. The long-term site had a high fertilization treatment (10g N m-2 year-1 and 5g P m-2 year-1) and control, and the short-term site had a low fertilization treatment (5g N m-2 year-1 and 2.5g P m-2 year-1) in addition to the high fertilization treatment and control. The fertilization treatments significantly altered most of the enzyme activities in both sites. The fertilization treatments increased activities of enzymes hydrolyzing products for C and nitrogen N sources, but decreased phosphatase activities. Such alterations were most pronounced in the organic soils. The fertilization treatments also increased ratios of total enzyme activities involved in hydrolysis for C products to those for N products. This result is consistent with an observation that long-term N and P fertilization decreased soil organic C in the same tundra ecosystem. Altered enzymatic stoichiometry with increased nutrient availability should be considered when modeling biogeochemical cycles in Arctic tundra ecosystems in response to warming predicted in the future.

  17. Estimated storage of amorphous silica in soils of the circum-Arctic tundra region

    NASA Astrophysics Data System (ADS)

    Alfredsson, H.; Clymans, W.; Hugelius, G.; Kuhry, P.; Conley, D. J.

    2016-03-01

    We investigated the vertical distribution, storage, landscape partitioning, and spatial variability of soil amorphous silica (ASi) at four different sites underlain by continuous permafrost and representative of mountainous and lowland tundra, in the circum-Arctic region. Based on a larger set of data, we present the first estimate of the ASi soil reservoir (0-1 m depth) in circum-Arctic tundra terrain. At all sites, the vertical distribution of ASi concentrations followed the pattern of either (1) declining concentrations with depth (most common) or (2) increasing/maximum concentrations with depth. Our results suggest that a set of processes, including biological control, solifluction and other slope processes, cryoturbation, and formation of inorganic precipitates influence vertical distributions of ASi in permafrost terrain, with the capacity to retain stored ASi on millennial timescales. At the four study sites, areal ASi storage (0-1 m) is generally higher in graminoid tundra compared to wetlands. Our circum-Arctic upscaling estimates, based on both vegetation and soil classification separately, suggest a storage amounting to 219 ± 28 and 274 ± 33 Tmol Si, respectively, of which at least 30% is stored in permafrost. This estimate would account for about 3% of the global soil ASi storage while occupying an equal portion of the global land area. This result does not support the hypothesis that the circum-Arctic tundra soil ASi reservoir contains relatively higher amounts of ASi than other biomes globally as demonstrated for carbon. Nevertheless, climate warming has the potential to significantly alter ASi storage and terrestrial Si cycling in the Arctic.

  18. Controls over nutrient flow through plants and microbes in arctic tundra

    SciTech Connect

    Schimel, J.P.

    1990-01-01

    Plant growth in arctic tundra is generally strongly limited by nutrient availability, particularly by nitrogen. The purpose of this sub-project of the R4D program was to examine plant N-uptake and the competition for N between plants and microbes in tundra. This competition can be an important control on N-flow and plant uptake but its significance in tundra has not been studied intensively. How the factors controlling the outcome of competition are altered by disturbance has also received very limited study, yet this is important facet of the R4D program. The primary goal for this project in 1990 was to initiate studies on N-partitioning and turnover in tussock tundra and how this is affected by dust deposition. Secondary goals were to examine the effect of differential dust deposition on microbial activity and nutrient cycling processes (mineralization and nitrification), and begin studies on the control of microbial N-uptake. The N-partitioning studies used {sup 15}N injected into Eriophorum tussocks to examine both the short-term (1 day) partitioning of N and the long-term (1 month and 1 year) redistribution of N through the plant-soil system. These experiments were done in both the early season (June) and peak season (July). To examine the effect of dust on N-partitioning tussocks in the heavy dust zone and in a control site were labeled with {sup 15}N and harvested at the end of the growing season. 4 refs., 1 tab.

  19. Blood lead concentrations in Alaskan tundra swans: linking breeding and wintering areas with satellite telemetry

    USGS Publications Warehouse

    Ely, Craig R.; Franson, Christian

    2014-01-01

    Tundra swans (Cygnus columbianus) like many waterfowl species are susceptible to lead (Pb) poisoning, and Pb-induced mortality has been reported from many areas of their wintering range. Little is known however about Pb levels throughout the annual cycle of tundra swans, especially during summer when birds are on remote northern breeding areas where they are less likely to be exposed to anthropogenic sources of Pb. Our objective was to document summer Pb levels in tundra swans throughout their breeding range in Alaska to determine if there were population-specific differences in blood Pb concentrations that might pose a threat to swans and to humans that may consume them. We measured blood Pb concentrations in tundra swans at five locations in Alaska, representing birds that winter in both the Pacific Flyway and Atlantic Flyway. We also marked swans at each location with satellite transmitters and coded neck bands, to identify staging and wintering sites and determine if winter site use correlated with summer Pb concentrations. Blood Pb levels were generally low ( < 0.2 μg/ml) in swans across all breeding areas. Pb levels were lower in cygnets than adults, suggesting that swans were likely exposed to Pb on wintering areas or on return migration to Alaska, rather than on the summer breeding grounds. Blood Pb levels varied significantly across the five breeding areas, with highest concentrations in birds on the North Slope of Alaska (wintering in the Atlantic Flyway), and lowest in birds from the lower Alaska Peninsula that rarely migrate south for winter.

  20. Long-term persistence of spent lead shot in tundra wetlands

    USGS Publications Warehouse

    Flint, Paul L.; Schamber, Jason L.

    2010-01-01

    We seeded experimental plots with number 4 lead pellets and sampled these plots for 10 years to assess the settlement rate of pellets in tundra wetland types commonly used by foraging waterfowl. After 10 years, about 10% of pellets remained within 6 cm of the surface, but >50% remained within 10 cm. We predict that spent lead pellets will eventually become unavailable to waterfowl; however, it will likely require >25 years for all pellets to exceed depths at which waterfowl species may forage.

  1. Blood lead concentrations in Alaskan tundra swans: linking breeding and wintering areas with satellite telemetry.

    PubMed

    Ely, Craig R; Franson, J Christian

    2014-04-01

    Tundra swans (Cygnus columbianus) like many waterfowl species are susceptible to lead (Pb) poisoning, and Pb-induced mortality has been reported from many areas of their wintering range. Little is known however about Pb levels throughout the annual cycle of tundra swans, especially during summer when birds are on remote northern breeding areas where they are less likely to be exposed to anthropogenic sources of Pb. Our objective was to document summer Pb levels in tundra swans throughout their breeding range in Alaska to determine if there were population-specific differences in blood Pb concentrations that might pose a threat to swans and to humans that may consume them. We measured blood Pb concentrations in tundra swans at five locations in Alaska, representing birds that winter in both the Pacific Flyway and Atlantic Flyway. We also marked swans at each location with satellite transmitters and coded neck bands, to identify staging and wintering sites and determine if winter site use correlated with summer Pb concentrations. Blood Pb levels were generally low (<0.2 μg/ml) in swans across all breeding areas. Pb levels were lower in cygnets than adults, suggesting that swans were likely exposed to Pb on wintering areas or on return migration to Alaska, rather than on the summer breeding grounds. Blood Pb levels varied significantly across the five breeding areas, with highest concentrations in birds on the North Slope of Alaska (wintering in the Atlantic Flyway), and lowest in birds from the lower Alaska Peninsula that rarely migrate south for winter.

  2. Herbivore Impact on Tundra Plant Community Dynamics Using Long-term Remote Sensing Observation

    NASA Astrophysics Data System (ADS)

    Yu, Q.; Engstrom, R.; Shiklomanov, N. I.

    2014-12-01

    Arctic tundra biome is now experiencing dramatic environmental changes accentuated by summer sea-ice decline, permafrost thaw, and shrub expansion. Multi-decadal time-series of the Normalized Difference Vegetation Index (NDVI, a spectral metric of vegetation productivity) shows an overall "greening" trend across the Arctic tundra biome. Regional trends in climate plausibly explain large-scale patterns of increasing plant productivity, as diminished summer sea-ice extent warms the adjacent land causing tundra vegetation to respond positively (increased photosynthetic aboveground biomass). However, at more local scales, there is a great deal of spatial variability in NDVI trends that likely reflects differences in hydrology and soil conditions, disturbance history, and use by wildlife and humans. Particularly, habitat use by large herbivores, such as reindeer and caribou, has large impacts on vegetation dynamics at local and regional scales, but the role of herbivores in modulating the response of vegetation to warming climate has received little attention. This study investigates regional tundra plant community dynamics within inhabits of different sizes of wild caribou/reindeer herds across the Arctic using GIMMS NDVI (Normalized Difference Vegetation Index) 3g data product. The Taimyr herd in Russia is one of the largest herds in the world with a population increase from 450,000 in 1975 to about 1 million animals in 2000. The population of the porcupine caribou herd has fluctuated in the past three decades between 100,000 and 180,000. Time-series of the maximum NDVI within the inhabit area of the Taimyr herd has increased about 2% per decade over the past three decades, while within the inhabit area of the Porcupine herd the maximum NDVI has increased about 5% per decade. Our results indicate that the impact of large herbivores can be detected from space and further analyses on seasonal dynamics of vegetation indices and herbivore behavior may provide more

  3. Analysis of the landscape structure in the tundra zone for western Siberia based on satellite data

    NASA Astrophysics Data System (ADS)

    Golubyatnikov, L. L.; Zarov, E. A.; Kazantsev, V. S.; Filippov, I. V.; Gavrilov, G. O.

    2015-12-01

    The landscape structure are investigated for typical and southern tundra subzones of western Siberia based on satellite images from Landsat and WorldView. The microlandscape types for the considered regions are selected and areas of microlandscapes are defined on the basis of satellite information and accounting data of field studies. The areas of the main wetland landscapes in the different types of bogs in northwestern Siberia are defined.

  4. Examining vertical patterns in Arctic tundra shrub canopies: Implications for carbon cycling in a changing environment

    NASA Astrophysics Data System (ADS)

    Heskel, M.; Atkin, O.; Turnbull, M.; Rastetter, E.; Griffin, K. L.

    2012-12-01

    Climate change is facilitating the northward encroachment and expansion of woody shrub species into the Arctic tundra, which in turn is altering a number of physical and biogeochemical processes that are likely to affect how carbon is cycled in this region. Greater shrub presence also increases leaf area index and canopy complexity in the tundra, introducing the potential for vertical variation in nitrogen, photosynthesis, and respiration through the canopy. For these reasons, Arctic tundra shrub communities represent an ecologically relevant case study for investigating carbon cycling-nitrogen relationships and testing optimization models. Here, we measured photosynthesis, respiration in the dark and light, the light inhibition of respiration, stomatal conductance, leaf nitrogen, and related leaf traits at different heights representing variation in light availability in multiple Arctic Alaskan shrub communities dominated by Salix pulchra and Betula nana to examine if the relatively low-stature canopies exhibit vertical patterns. Highest rates of photosynthesis and respiration (P < 0.0001) were observed at the top of the canopy, suggesting substrate-limitation of respiration at lower, more shaded canopy levels. Leaves at the top of the canopy also exhibited the lowest inhibition of respiration by light (NS), and the highest nitrogen concentrations. (P < 0.05) implying a relationship between photosynthesis, nitrogen, and a relaxation of light-inhibition to optimize metabolic efficiency. Data from this study was also used to test leaf-level and canopy nitrogen optimization models. These data emphasize the need to include canopy complexity in tundra carbon models, as neglecting physiological differences through a canopy may lead to an underestimation of stored carbon.

  5. Bird Communities of the Arctic Shrub Tundra of Yamal: Habitat Specialists and Generalists

    PubMed Central

    Sokolov, Vasiliy; Ehrich, Dorothée; Yoccoz, Nigel G.; Sokolov, Alexander; Lecomte, Nicolas

    2012-01-01

    Background The ratio of habitat generalists to specialists in birds has been suggested as a good indicator of ecosystem changes due to e.g. climate change and other anthropogenic perturbations. Most studies focusing on this functional component of biodiversity originate, however, from temperate regions. The Eurasian Arctic tundra is currently experiencing an unprecedented combination of climate change, change in grazing pressure by domestic reindeer and growing human activity. Methodology/Principal Findings Here we monitored bird communities in a tundra landscape harbouring shrub and open habitats in order to analyse bird habitat relationships and quantify habitat specialization. We used ordination methods to analyse habitat associations and estimated the proportions of specialists in each of the main habitats. Correspondence Analysis identified three main bird communities, inhabiting upland, lowland and dense willow shrubs. We documented a stable structure of communities despite large multiannual variations of bird density (from 90 to 175 pairs/km2). Willow shrub thickets were a hotspot for bird density, but not for species richness. The thickets hosted many specialized species whose main distribution area was south of the tundra. Conclusion/Significance If current arctic changes result in a shrubification of the landscape as many studies suggested, we would expect an increase in the overall bird abundance together with an increase of local specialists, since they are associated with willow thickets. The majority of these species have a southern origin and their increase in abundance would represent a strengthening of the boreal component in the southern tundra, perhaps at the expense of species typical of the subarctic zone, which appear to be generalists within this zone. PMID:23239978

  6. Winter and early spring CO2 efflux from tundra communities of northern Alaska

    USGS Publications Warehouse

    Fahnestock, J.T.; Jones, M.H.; Brooks, P.D.; Walker, D.A.; Welker, J.M.

    1998-01-01

    Carbon dioxide concentrations through snow were measured in different arctic tundra communities on the North Slope of Alaska during winter and early spring of 1996. Subnivean CO2 concentrations were always higher than atmospheric CO2. A steady state diffusion model was used to generate conservative estimates of CO2 flux to the atmosphere. The magnitude of CO2 efflux differed with tundra community type, and rates of carbon release increased from March to May. Winter CO2 efflux was highest in riparian and snow bed communities and lowest in dry heath, upland tussock, and wet sedge communities. Snow generally accrues earlier in winter and is deeper in riparian and snow bed communities compared with other tundra communities, which are typically windswept and do not accumulate much snow during the winter. These results support the hypothesis that early and deep snow accumulation may insulate microbial populations from very cold temperatures, allowing sites with earlier snow cover to sustain higher levels of activity throughout winter compared to communities that have later developing snow cover. Extrapolating our estimates of CO2 efflux to the entire snow-covered season indicates that total carbon flux during winter in the Arctic is 13-109 kg CO2-C ha-1, depending on the vegetation community type. Wintertime CO2 flux is a potentially important, yet largely overlooked, part of the annual carbon cycle of tundra, and carbon release during winter should be accounted for in estimates of annual carbon balance in arctic ecosystems. Copyright 1998 by the American Geophysical Union.

  7. Disturbance and Recovery of Arctic Alaskan Tundra Terrain. A Review of Recent Investigations.

    DTIC Science & Technology

    1987-07-01

    Engineers 1982) and the Arctic National Wildlife Refuge ( ANWR ) (U.S. * Prepared by J. Brown. Department of Interior 1983). 00 Icr. 0 0 II A wide range of...perching birds [Walker et al. 19801) were flat- ( ANWR ), which was opened to winter seismic sur- tened. Erect dead sedges were also flattened and veys in...scraping occurred. In ter operations in ANWR show that dry tundra these areas the surface albedo was higher because (Fig. 22) was the most noticeably

  8. Luteolibacter arcticus sp. nov., isolated from high Arctic tundra soil, and emended description of the genus Luteolibacter.

    PubMed

    Kim, MyongChol; Pak, SeHong; Rim, SongGuk; Ren, Lvzhi; Jiang, Fan; Chang, Xulu; Liu, Ping; Zhang, Yumin; Fang, Chengxiang; Zheng, Congyi; Peng, Fang

    2015-06-01

    A pale yellow, Gram-reaction-negative, non-motile, aerobic bacterium, designated MC 3726T, was isolated from a tundra soil near Ny-Ålesund, Svalbard Archipelago, Norway (78 °N). Growth occurred at 4-37 °C (optimum 25-30 °C) and at pH 5.0-9.0 (optimum pH 8.0). Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain MC 3726T belonged to the genus Luteolibacter in the family Verrucomicrobiaceae. The 16S rRNA gene sequence of this strain showed 93.18, 92.54 and 92.44 % similarity to those of Luteolibacter cuticulihirudinis E100T, Luteolibacter pohnpeiensis A4T-83T and Luteoliba