Dissolved organic carbon and nitrogen release from boreal Holocene permafrost and seasonally frozen soils of Alaska

NASA Astrophysics Data System (ADS)

Wickland, Kimberly P.; Waldrop, Mark P.; Aiken, George R.; Koch, Joshua C.; Torre Jorgenson, M.; Striegl, Robert G.

2018-06-01

Permafrost (perennially frozen) soils store vast amounts of organic carbon (C) and nitrogen (N) that are vulnerable to mobilization as dissolved organic carbon (DOC) and dissolved organic and inorganic nitrogen (DON, DIN) upon thaw. Such releases will affect the biogeochemistry of permafrost regions, yet little is known about the chemical composition and source variability of active-layer (seasonally frozen) and permafrost soil DOC, DON and DIN. We quantified DOC, total dissolved N (TDN), DON, and DIN leachate yields from deep active-layer and near-surface boreal Holocene permafrost soils in interior Alaska varying in soil C and N content and radiocarbon age to determine potential release upon thaw. Soil cores were collected at three sites distributed across the Alaska boreal region in late winter, cut in 15 cm thick sections, and deep active-layer and shallow permafrost sections were thawed and leached. Leachates were analyzed for DOC, TDN, nitrate (NO3 ‑), and ammonium (NH4 +) concentrations, dissolved organic matter optical properties, and DOC biodegradability. Soils were analyzed for C, N, and radiocarbon (14C) content. Soil DOC, TDN, DON, and DIN yields increased linearly with soil C and N content, and decreased with increasing radiocarbon age. These relationships were significantly different for active-layer and permafrost soils such that for a given soil C or N content, or radiocarbon age, permafrost soils released more DOC and TDN (mostly as DON) per gram soil than active-layer soils. Permafrost soil DOC biodegradability was significantly correlated with soil Δ14C and DOM optical properties. Our results demonstrate that near-surface Holocene permafrost soils preserve greater relative potential DOC and TDN yields than overlying seasonally frozen soils that are exposed to annual leaching and decomposition. While many factors control the fate of DOC and TDN, the greater relative yields from newly thawed Holocene permafrost soils will have the largest potential impact in areas dominated by organic-rich soils.

Effects of permafrost thaw on carbon emissions under aerobic and anaerobic environments in the Great Hing'an Mountains, China.

PubMed

Song, Changchun; Wang, Xianwei; Miao, Yuqing; Wang, Jiaoyue; Mao, Rong; Song, Yanyu

2014-07-15

The carbon (C) pool of permafrost peatland is very important for the global C cycle. Little is known about how permafrost thaw could influence C emissions in the Great Hing'an Mountains of China. Through aerobic and anaerobic incubation experiments, we studied the effects of permafrost thaw on CH4 and CO2 emissions. The rates of CH4 and CO2 emissions were measured at -10, 0 and 10°C. Although there were still C emissions below 0°C, rates of CH4 and CO2 emissions significantly increased with permafrost thaw under aerobic and anaerobic conditions. The C release under aerobic conditions was greater than under anaerobic conditions, suggesting that permafrost thaw and resulting soil environment change should be important influences on C emissions. However, CH4 stored in permafrost soils could affect accurate estimation of CH4 emissions from microbial degradation. Calculated Q10 values in the permafrost soils were significantly higher than values in active-layer soils under aerobic conditions. Our results highlight that permafrost soils have greater potential decomposability than soils of the active layer, and such carbon decomposition would be more responsive to the aerobic environment. © 2013 Elsevier B.V. All rights reserved.

Nine year active layer thermal monitoring at Fildes Peninsula, King George Island, Maritime Antarctica

NASA Astrophysics Data System (ADS)

Michel, Roberto; Andrade, André; Simas, Felipe; Silva, Tássio; Loureiro, Diego; Schaefer, Carlos

2017-04-01

Most global circulation models predict enhanced rates of climate change, particularly temperature increase, at higher latitudes witch are currently faced with rapid rates of regional climate change (Convey 2006, Vaughan et al. 2003, Quayle et al. 2002), Antarctic ecosystems are expected to show particular sensitivity and rapid responses (Freckman and Virginia 1997, Quayle et al. 2002, 2003). The active layer and permafrost are important components of the cryosphere due to their role in energy flux regulation and sensitivity to climate change (Kane et al., 2001; Smith and Brown, 2009). Compared with other regions of the globe, our understanding of Antarctic permafrost is poor, especially in relation to its thermal state and evolution, (Bockheim, 1995, Bockheim et al., 2008). The active layer monitoring site was installed in the summer of 2008, and consists of thermistors (accuracy ± 0.2 °C) arranged in a vertical array (Turbic Eutric Cryosol 60 m asl, 10.5 cm, 32.5 cm, 67.5 cm and 83.5 cm). All probes were connected to a Campbell Scientific CR 1000 data logger recording data at hourly intervals from March 1st 2008 until November 30th 2012. We calculated the thawing days (TD), freezing days (FD); thawing degree days (TDD) and freezing degree days (FDD); all according to Guglielmin et al. (2008). The active lawyer thickness was calculated as the 0 °C depth by extrapolating the thermal gradient from the two deepest temperature measurements (Guglielmin, 2006). The temperature at 10.5 cm reaches a maximum daily average (5.6 °C) in late January 2015, reaching a minimum (-9.6 °C) in in early August 2011, at 83.5 cm maximum daily average (0.6 °C) was reached in mid March 2009 and minimum (-5.5 °C) also in early August 2011. The years of 2008, 2009 and 2011 recorded thaw days at the bottom of the profile (62 and 49 in 2009 and 2011), and logged the highest soil moisture contents of the time series (62%, 59% and 63%). Seasonal variability of the active layer shows disparities between different years, especially in bottom most layer, where high summer temperatures trigger a increase in soil moisture content that can endure for several seasons. The winter of 2014 also deserves special attention, being the mildest winter recorded during the studied period; in July minimum monthly temperatures were -3.2 °C and -1.9 °C at 10.5 cm and 83.5 cm, it experienced 17 FD summing -0.61 FDD, average for the whole period was -7.5 °C, -3.9 °C, 27 FD and -55 FDD (2008 also had a mild winter but still hold 21 FD and -0,88 FDD at 83.5 cm in July). The summer of 2009 was the warmest facing 31 thawing days and summing 105 thawing degree days at 10.5 cm in January (28.7 thawing days and 66.3 thawing degree days average). The profile showed a increase in soil water content annual during warm summers, persisting for the following seasons, average is 44 % in 2008, 32 % in 2012 closing the time series with a annual average of 27 % in 2016, all values at 83.5 cm. Active layer thickness varied between 86 cm (max of 2015, March) and 117 cm (max of 2009, March). The active layer thermal regime over a 9 year period at Fildes Peninsula shows great variation between years, 2008, 2009 and 2011 presenting warm summers and 2014 being abnormally warm during Winter. Temperature fluctuations can affect the active layer in depth and the effects of warmer temperatures in the bottom of the profile can increase soil water content for several seasons.

Influences and interactions of inundation, peat, and snow on active layer thickness

DOE PAGES

Atchley, Adam L.; Coon, Ethan T.; Painter, Scott L.; ...

2016-05-18

Active layer thickness (ALT), the uppermost layer of soil that thaws on an annual basis, is a direct control on the amount of organic carbon potentially available for decomposition and release to the atmosphere as carbon-rich Arctic permafrost soils thaw in a warming climate. Here, we investigate how key site characteristics affect ALT using an integrated surface/subsurface permafrost thermal hydrology model. ALT is most sensitive to organic layer thickness followed by snow depth but is relatively insensitive to the amount of water on the landscape with other conditions held fixed. Furthermore, the weak ALT sensitivity to subsurface saturation suggests thatmore » changes in Arctic landscape hydrology may only have a minor effect on future ALT. But, surface inundation amplifies the sensitivities to the other parameters and under large snowpacks can trigger the formation of near-surface taliks.« less

Selective Leaching of Dissolved Organic Matter From Alpine Permafrost Soils on the Qinghai-Tibetan Plateau

NASA Astrophysics Data System (ADS)

Wang, Yinghui; Xu, Yunping; Spencer, Robert G. M.; Zito, Phoebe; Kellerman, Anne; Podgorski, David; Xiao, Wenjie; Wei, Dandan; Rashid, Harunur; Yang, Yuanhe

2018-03-01

Ongoing global temperature rise has caused significant thaw and degradation of permafrost soils on the Qinghai-Tibetan Plateau (QTP). Leaching of organic matter from permafrost soils to aquatic systems is highly complex and difficult to reproduce in a laboratory setting. We collected samples from natural seeps of active and permafrost layers in an alpine swamp meadow on the QTP to shed light on the composition of mobilized dissolved organic matter (DOM) by combining optical measurements, ultrahigh-resolution Fourier transform ion cyclotron resonance mass spectrometry, radiocarbon (14C), and solid-state 13C nuclear magnetic resonance spectroscopy. Our results show that even though the active layer soils contain large amounts of proteins and carbohydrates, there is a selective release of aromatic components, whereas in the deep permafrost layer, carbohydrate and protein components are preferentially leached during the thawing process. Given these different chemical characteristics of mobilized DOM, we hypothesize that photomineralization contributes significantly to the loss of DOM that is leached from the seasonally thawed surface layer. However, with continued warming, biodegradation will become more important since biolabile materials such as protein and carbohydrate are preferentially released from deep-layer permafrost soils. This transition in DOM leachate source and associated chemical composition has ramifications for downstream fluvial networks on the QTP particularly in terms of processing of carbon and associated fluxes.

The influence of vegetation and soil characteristics on active-layer thickness of permafrost soils in boreal forest.

PubMed

Fisher, James P; Estop-Aragonés, Cristian; Thierry, Aaron; Charman, Dan J; Wolfe, Stephen A; Hartley, Iain P; Murton, Julian B; Williams, Mathew; Phoenix, Gareth K

2016-09-01

Carbon release from thawing permafrost soils could significantly exacerbate global warming as the active-layer deepens, exposing more carbon to decay. Plant community and soil properties provide a major control on this by influencing the maximum depth of thaw each summer (active-layer thickness; ALT), but a quantitative understanding of the relative importance of plant and soil characteristics, and their interactions in determine ALTs, is currently lacking. To address this, we undertook an extensive survey of multiple vegetation and edaphic characteristics and ALTs across multiple plots in four field sites within boreal forest in the discontinuous permafrost zone (NWT, Canada). Our sites included mature black spruce, burned black spruce and paper birch, allowing us to determine vegetation and edaphic drivers that emerge as the most important and broadly applicable across these key vegetation and disturbance gradients, as well as providing insight into site-specific differences. Across sites, the most important vegetation characteristics limiting thaw (shallower ALTs) were tree leaf area index (LAI), moss layer thickness and understory LAI in that order. Thicker soil organic layers also reduced ALTs, though were less influential than moss thickness. Surface moisture (0-6 cm) promoted increased ALTs, whereas deeper soil moisture (11-16 cm) acted to modify the impact of the vegetation, in particular increasing the importance of understory or tree canopy shading in reducing thaw. These direct and indirect effects of moisture indicate that future changes in precipitation and evapotranspiration may have large influences on ALTs. Our work also suggests that forest fires cause greater ALTs by simultaneously decreasing multiple ecosystem characteristics which otherwise protect permafrost. Given that vegetation and edaphic characteristics have such clear and large influences on ALTs, our data provide a key benchmark against which to evaluate process models used to predict future impacts of climate warming on permafrost degradation and subsequent feedback to climate. © 2016 The Authors. Global Change Biology Published by John Wiley & Sons Ltd.

Dynamics and characteristics of soil temperature and moisture of active layer in central Tibetan Plateau

NASA Astrophysics Data System (ADS)

Zhao, L.; Hu, G.; Wu, X.; Tian, L.

2017-12-01

Research on the hydrothermal properties of active layer during the thawing and freezing processes was considered as a key question to revealing the heat and moisture exchanges between permafrost and atmosphere. The characteristics of freezing and thawing processes at Tanggula (TGL) site in permafrost regions on the Tibetan Plateau, the results revealed that the depth of daily soil temperature transmission was about 40 cm shallower during thawing period than that during the freezing period. Soil warming process at the depth above 140 cm was slower than the cooling process, whereas they were close below 140 cm depth. Moreover, the hydro-thermal properties differed significantly among different stages. Precipitation caused an obviously increase in soil moisture at 0-20 cm depth. The vertical distribution of soil moisture could be divided into two main zones: less than 12% in the freeze state and greater than 12% in the thaw state. In addition, coupling of moisture and heat during the freezing and thawing processes also showed that soil temperature decreased faster than soil moisture during the freezing process. At the freezing stage, soil moisture exhibited an exponential relationship with the absolute soil temperature. Energy consumed for water-ice conversion during the freezing process was 149.83 MJ/m2 and 141.22 MJ/m2 in 2011 and 2012, respectively, which was estimated by the soil moisture variation.

Investigation of the Active layer thickness and ground subsidence in Taimyr

NASA Astrophysics Data System (ADS)

Grebenets, V. I.; Tolmanov, V. A.; Streletskiy, D. A.

2017-12-01

The active layer of permafrost (ALT) is highly unstable and dynamic in space and time. Soil undergoes frost heave during the freezing process, and ground subsidence during the thawing. The problem of the development of soil sediments' deformations in ALT is relevant as for natural objects (influence on runoff, changing of landscape and vegetation, etc.), so for industrial infrastructure (pipelines, roads, buildings and structures). The observations in the frame of the CALM program in Taimyr were carried out since 2005 (site R-32) with the measurements of the geodetic level of soil surface since 2007. The results of these measurements were processed and the maps of thawing and changes in meso- and micro-relief were constructed. The differentiation of seasonally thawed layer and ground subsidence in different micro-landscape conditions was investigated. The depth of seasonal thawing and the changes of surface movements were found to be determined by three main systems: a) the weather conditions and the climate trends; b) the permafrost-lithological conditions and drainage; c) the micro-landscape characteristics. It was established that for the Norilsk region (Taimyr) the trend in increasing ALT was 0.3 cm / year (for the period of observations 2005-2016) with a certain slowdown in the last 3 to 4 years. Increase in the depth of the ALT was related to the rising Summer temperatures and reduction of the cold period. A strong high impact of the summer precipitation conditions was revealed: in rather cold summer of 2012, with large amount of precipitation mainly in the warmest month (July), the defrosting was the highest. In the year with the record-breaking number of positive degree days (from all the 85 years of regular meteorological observations) but anomalously dry year 2013 (in July - less than 10 mm atmospheric precipitation), the thawing was minimal at the R-32 site. It is interesting that the ground subsidence in 2012 was 30-40% less, than in 2013. This is due to the water saturation of the system, since water is practically incompressible. The maximum thawing and the ground subsidence are found in negative forms of relief. Differences in depths of the seasonally thawed layer and in change of the surface level within different landscapes can reach 50-70%.

Insights into seasonal active layer dynamics by monitoring relative velocity changes using ambient seismic noise

NASA Astrophysics Data System (ADS)

James, S. R.; Knox, H. A.; Cole, C. J.; Abbott, R. E.; Screaton, E.

2016-12-01

Seasonal freeze and thaw of the active layer above permafrost results in dramatic changes in seismic velocity. We used daily cross correlations of ambient seismic noise recorded at Poker Flat Research Range in central Alaska to create a nearly continuous 2-year record of relative velocity changes. This analysis required that we modify the Moving Window Cross-spectral Analysis technique used in the Python package MSNoise to reduce the occurrence of cycle skipping. Results show relative velocity variations follow a seasonal pattern, where velocities decrease in late spring through the summer months and increase through the fall and winter months. This timing is consistent with active layer freeze and thaw in this region. These results were compared to a suite of ground- and satellite-based measurements to identify relationships. A decrease in relative velocities in late spring closely follows the timing of snow melt recorded in nearby ground temperatures and snow-depth logs. This transition also aligns with a decrease in the Normalized Difference Snow Index (NDSI) derived from multi-temporal Landsat 8 satellite imagery collected over the study site. A gradual increase in relative velocity through the fall months occurs when temperatures below ground surface remain near zero. We suggest this is due to latent heat feedbacks that keep temperatures constant while active layer velocities increase from continued ice formation. This highlights the value in velocity variations for capturing details on the freezing process. In addition, spatial variations in the magnitude of velocity changes are consistent with thaw probe surveys. Exploring relationships with remote sensing may allow indirect measurements of thaw over larger areas and further surface wave analysis may allow for thickness evolution measurements. Sandia National Laboratories is a multi-program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. Department of Energy's National Nuclear Security Administration under contract DE-AC04-94AL85000.

Microbial network, phylogenetic diversity and community membership in the active layer across a permafrost thaw gradient.

PubMed

Mondav, Rhiannon; McCalley, Carmody K; Hodgkins, Suzanne B; Frolking, Steve; Saleska, Scott R; Rich, Virginia I; Chanton, Jeff P; Crill, Patrick M

2017-08-01

Biogenic production and release of methane (CH 4 ) from thawing permafrost has the potential to be a strong source of radiative forcing. We investigated changes in the active layer microbial community of three sites representative of distinct permafrost thaw stages at a palsa mire in northern Sweden. The palsa site (intact permafrost and low radiative forcing signature) had a phylogenetically clustered community dominated by Acidobacteria and Proteobacteria. The bog (thawing permafrost and low radiative forcing signature) had lower alpha diversity and midrange phylogenetic clustering, characteristic of ecosystem disturbance affecting habitat filtering. Hydrogenotrophic methanogens and Acidobacteria dominated the bog shifting from palsa-like to fen-like at the waterline. The fen (no underlying permafrost, high radiative forcing signature) had the highest alpha, beta and phylogenetic diversity, was dominated by Proteobacteria and Euryarchaeota and was significantly enriched in methanogens. The Mire microbial network was modular with module cores consisting of clusters of Acidobacteria, Euryarchaeota or Xanthomonodales. Loss of underlying permafrost with associated hydrological shifts correlated to changes in microbial composition, alpha, beta and phylogenetic diversity associated with a higher radiative forcing signature. These results support the complex role of microbial interactions in mediating carbon budget changes and climate feedback in response to climate forcing. © 2017 Society for Applied Microbiology and John Wiley & Sons Ltd.

Determinants of carbon release from the active layer and permafrost deposits on the Tibetan Plateau

PubMed Central

Chen, Leiyi; Liang, Junyi; Qin, Shuqi; Liu, Li; Fang, Kai; Xu, Yunping; Ding, Jinzhi; Li, Fei; Luo, Yiqi; Yang, Yuanhe

2016-01-01

The sign and magnitude of permafrost carbon (C)-climate feedback are highly uncertain due to the limited understanding of the decomposability of thawing permafrost and relevant mechanistic controls over C release. Here, by combining aerobic incubation with biomarker analysis and a three-pool model, we reveal that C quality (represented by a higher amount of fast cycling C but a lower amount of recalcitrant C compounds) and normalized CO2–C release in permafrost deposits were similar or even higher than those in the active layer, demonstrating a high vulnerability of C in Tibetan upland permafrost. We also illustrate that C quality exerts the most control over CO2–C release from the active layer, whereas soil microbial abundance is more directly associated with CO2–C release after permafrost thaw. Taken together, our findings highlight the importance of incorporating microbial properties into Earth System Models when predicting permafrost C dynamics under a changing environment. PMID:27703168

Mechanistic modeling of thermo-hydrological processes and microbial interactions at pore to profile scales resolve methane emission dynamics from permafrost soil

NASA Astrophysics Data System (ADS)

Ebrahimi, Ali; Or, Dani

2017-04-01

The sensitivity of the Earth's polar regions to raising global temperatures is reflected in rapidly changing hydrological processes with pronounced seasonal thawing of permafrost soil and increased biological activity. Of particular concern is the potential release of large amounts of soil carbon and the stimulation of other soil-borne GHG emissions such as methane. Soil methanotrophic and methanogenic microbial communities rapidly adjust their activity and spatial organization in response to permafrost thawing and a host of other environmental factors. Soil structural elements such as aggregates and layering and hydration status affect oxygen and nutrient diffusion processes thereby contributing to methanogenic activity within temporal anoxic niches (hotspots or hot-layers). We developed a mechanistic individual based model to quantify microbial activity dynamics within soil pore networks considering, hydration, temperature, transport processes and enzymatic activity associated with methane production in soil. The model was the upscaled from single aggregates (or hotspots) to quantifying emissions from soil profiles in which freezing/thawing processes provide macroscopic boundary conditions for microbial activity at different soil depths. The model distinguishes microbial activity in aerate bulk soil from aggregates (or submerged parts of the profile) for resolving methane production and oxidation rates. Methane transport pathways through soil by diffusion and ebullition of bubbles vary with hydration dynamics and affect emission patterns. The model links seasonal thermal and hydrologic dynamics with evolution of microbial community composition and function affecting net methane emissions in good agreement with experimental data. The mechanistic model enables systematic evaluation of key controlling factors in thawing permafrost and microbial response (e.g., nutrient availability, enzyme activity, PH) on long term methane emissions and carbon decomposition rates in the rapidly changing polar regions.

Shifting Foliar N:P Ratios with Experimental Soil Warming in Tussock Tundra

NASA Astrophysics Data System (ADS)

Jasinski, B.; Mack, M. C.; Schuur, E.; Mauritz, M.; Walker, X. J.

2017-12-01

Warming temperatures in the Arctic and boreal ecosystems are currently driving widespread permafrost thaw. Thermokarst is one form of thaw, in which a deepening active soil layer and associated hydrologic changes can lead to increased nutrient availability and shifts in plant community composition. Individual plant species often differ in their ability to access nutrients and adapt to new environmental conditions. While nitrogen (N) is often the nutrient most limiting to Arctic plant communities, the extent to which plant available phosphorus (P) from previously frozen mineral soil may increase as the active layer deepens is still uncertain. To understand the changing relationship between species' uptake of N and P in a thermokarst environment, we assessed foliar N:P ratios from 2015 in two species, a tussock sedge (Eriophorum vaginatum) and a dwarf shrub (Rubus chamaemorus), at a moist acidic tussock tundra experimental passive soil warming site. The passive soil warming treatment increased active layer depth in warmed plots by 35.4 cm (+/- 1.1 cm), an 80% increase over the control plots. E.vaginatum demonstrated a 16.9% decrease (p=0.012, 95% CI [-27.99%, -5.94%]) in foliar N:P ratios in warmed plots, driven mostly by an increase in foliar phosphorus. Foliar N:P ratios of R.chamaemorus showed no significant change. However, foliar samples of R.chamaemorus were significantly enriched in the isotope 15N in soil warming plots (9.9% increase (p=0.002, 95% CI [4.45%, 15.39%])), while the sedge E.vaginatum was slightly depleted. These results suggest that (1) in environments with thawing mineral soil plant available phosphorus may increase more quickly than nitrogen, and (2) that species' uptake strategies and responses to increasing N and P will vary, which has implications for future ecological shifts in thawing ecosystems.

Flow Pathways of Snow and Ground Ice Melt Water During Initial Seasonal Thawing of the Active Layer on Continuous Permafrost

NASA Astrophysics Data System (ADS)

Sjoberg, Y.; Johansson, E.; Rydberg, J.

2017-12-01

In most arctic environments, the snowmelt is the main hydrologic event of the year as a large fraction of annual precipitation rapidly moves through the catchment. Flow can occur on top of the frozen ground surface or through the developing active layer, and flow pathways are critical determinants for biogeochemical transport. We study the linkages between micro topography, active layer thaw, and water partitioning on a hillslope in Greenland during late snowmelt season to explore how seasonal subsurface flow pathways develop. During snowmelt, a parallel surface drainage pattern appears across the slope, consisting of small streams, and water also collects in puddles across the slope. Thaw rates in the active layer were significantly higher (T-test p<0.01) on wet parts of the slope (0.8 cm/day), compared to drier parts of the slope (0.6 cm/day). Analyses of stable water isotopic composition show that snow had the lightest isotopic signatures, but with a large spread of values, while seasonally frozen ground and standing surface water (puddles) were heavier. The stream water became heavier over the two-week sampling period, suggesting an increasing fraction of melted soil water input over time. In contrast, standing surface water (puddles) isotopic composition did not change over time. In boreal catchments, seasonal frost has previously been found to not significantly influence flow pathways during most snowmelt events, and pre-event groundwater make out most of the stream water during snowmelt. Our results from a continuous permafrost environment show that both surface (overland) and subsurface flow pathways in the active layer are active, and that a large fraction of the water moving on the hillslope comes from melted ground ice rather than snow in the late snowmelt season. This suggests a possibility that flow pathways during snowmelt could shift to deeper subsurface flow following degradation of continuous permafrost.

Activation of thermal denudation under recent climatic fluctuations, Central Yamal, Russia

NASA Astrophysics Data System (ADS)

Khomutov, Artem; Dvornikov, Yury; Gubarkov, Anatoly; Mullanurov, Damir

2016-04-01

Climatic fluctuations over the past few years significantly affected the increase of cryogenic processes activity in the tundra zone of the Yamal Peninsula. On Central Yamal a large-scale cryogenic landsliding was observed in 1989, while cryogenic earth flows were actively developing since 2012 through tabular ground ice thawing. As a result, thermocirques form on lakeshores. Key area (research station "Vaskiny Dachi" on the Se-Yakha and the Mordy-Yakha interfluve) during the period from 1989 to 2012 was characterized by a local occurrence of thermal denudation. By 2010, remote sensing data showed that this process in the study area was usually inactive and thermocirques looked stabilized, overgrown by vegetation. Extremely warm summer of 2012 resulted in formation of new thermal denudation features, such as cryogenic translational landslides, cryogenic earth flows and furthermore, thermocirques, complex landforms resulting from ice wedges and tabular ground ice thaw. The 2012 warm season was characterized by a deeper active layer: at the end of the warm period deeper by 15% than the average for the 1993-2011. Observed were indications of a high pore pressure in the active layer: effuse of liquefied clay in the tension cracks on many slopes. By 2013, according to the field and remote sensing data, there were more than 90 active thermal denudation landforms from 66 to 25000 sq.m in size on the territory of 345 sq.km. Thus, at the present in the tundra of the Yamal Peninsula the predominance of the processes associated with tabular ground ice thawing (cryogenic earth flows) over the processes associated with the ice formation at the bottom of the active layer (cryogenic translational landslides) is observed. It is caused by both a periodic deepening of the active layer, and consecutive increase of ground temperature. Activation of thermal denudation observed on the Yamal Peninsula last years is associated with extremely warm spring and summer of 2012. By the end of the warm season thawing of the top of icy permafrost and tabular ground ice on some slopes resulted in cryogenic landsliding and further thermocirques development. The study is partially supported by RFBR, research project No.13-05-91001-ANF_a; ASF No I 1401-N29; and The Presidential Council for grants, Science School Grant No.3929.2014.5.

Satellite based assessment of recent permafrost extent and active layer trends over Alaska and Northwest Canada

NASA Astrophysics Data System (ADS)

Kim, Y.; Kimball, J. S.; PARK, H.; Yi, Y.

2017-12-01

Climate change in the Boreal-Arctic region has experienced greater surface air temperature (SAT) warming than the global average in recent decades, which is promoting permafrost thawing and active layer deepening. Permafrost extent (PE) and active layer thickness (ALT) are key environmental indicators of recent climate change, and strongly impact other eco-hydrological processes including land-atmosphere carbon exchange. We developed a new approach for regional estimation and monitoring of PE using daily landscape freeze-thaw (FT) records derived from satellite microwave (37 GHz) brightness temperature (Tb) observations. ALT was estimated within the PE domain using empirical modeling of land cover dependent edaphic factors and an annual thawing index derived from MODIS land surface temperature (LST) observations and reanalysis based surface air temperatures (SAT). The PE and ALT estimates were derived over the 1980-2016 satellite record and NASA ABoVE (Arctic Boreal Vulnerability Experiment) domain encompassing Alaska and Northwest Canada. The baseline model estimates were derived at 25-km resolution consistent with the satellite FT global record. Our results show recent widespread PE decline and deepening ALT trends, with larger spatial variability and model uncertainty along the southern PE boundary. Larger PE and ALT variability occurs over heterogeneous permafrost subzones characterized by dense vegetation, and variable snow cover and organic layer conditions. We also tested alternative PE and ALT estimates derived using finer (6-km) scale satellite Tb (36.5 GHz) and FT retrievals from a calibrated AMSR-E and AMSR2 sensor record. The PE and ALT results were compared against other independent observations, including process model simulations, in situ measurements, and permafrost inventory records. A model sensitivity analysis was conducted to evaluate snow cover, soil organic layer, and vegetation composition impacts to ALT. The finer delineation of permafrost and active layer conditions provides enhanced regional monitoring of PE and ALT changes over the ABoVE domain, including heterogeneous permafrost subzones.

Dissolved organic carbon and nitrogen release from Holocene permafrost and seasonally frozen soils

NASA Astrophysics Data System (ADS)

Wickland, K.; Waldrop, M. P.; Koch, J. C.; Jorgenson, T.; Striegl, R. G.

2017-12-01

Permafrost (perennially frozen) soils store vast amounts of carbon (C) and nitrogen (N) that are vulnerable to mobilization to the atmosphere as greenhouse gases and to terrestrial and aquatic ecosystems as dissolved organic carbon (DOC) and total dissolved nitrogen (TDN) upon thaw. Such releases will affect the biogeochemistry of arctic and boreal regions, yet little is known about active layer (seasonally frozen) and permafrost source variability that determines DOC and TDN mobilization. We quantified DOC and TDN leachate yields from a range of active layer and permafrost soils in Alaska varying in age and C and N content to determine potential release upon thaw. Soil cores from the upper 1 meter were collected in late winter, when soils were frozen, from three locations representing a range in geographic position, landscape setting, permafrost depth, and soil types across interior Alaska. Two 15 cm-thick segments were extracted from each core: a deep active-layer horizon and a shallow permafrost horizon. Soils were thawed and leached for DOC and TDN yields, dissolved organic matter optical properties, and DOC biodegradability; soils were analyzed for C and N content, and radiocarbon content. Soils had wide-ranging C and N content (<1-44% C, <0.1-2.3% N), and varied in radiocarbon age from 450-9200 years before present - thus capturing typical ranges of boreal and arctic soils. Soil DOC and TDN yields increased linearly with soil C and N content, and decreased with increasing radiocarbon age. However, across all sites DOC and TDN yields were significantly greater from permafrost soils (0.387 ± 0.324 mg DOC g-1 soil; 0.271 ± 0.0271 mg N g-1 soil) than from active layer soils (0.210 ± 0.192 mg DOC g-1 soil; 0.00716 ± 0.00569 mg N g-1 soil). DOC biodegradability increased with increasing radiocarbon age, and was statistically similar for active layer and permafrost soils. Our findings suggest that the continuously frozen state of permafrost soils has preserved higher relative potential DOC and TDN yields compared to seasonally thawed soils exposed to annual leaching and decomposition, and that frozen soils undergo microbial processes that produce labile DOC over time.

Reviews and Syntheses: Effects of permafrost thaw on arctic aquatic ecosystems

NASA Astrophysics Data System (ADS)

Vonk, J. E.; Tank, S. E.; Bowden, W. B.; Laurion, I.; Vincent, W. F.; Alekseychik, P.; Amyot, M.; Billet, M. F.; Canário, J.; Cory, R. M.; Deshpande, B. N.; Helbig, M.; Jammet, M.; Karlsson, J.; Larouche, J.; MacMillan, G.; Rautio, M.; Anthony, K. M. Walter; Wickland, K. P.

2015-07-01

The Arctic is a water-rich region, with freshwater systems covering 16 % of the northern permafrost landscape. The thawing of this permafrost creates new freshwater ecosystems, while at the same time modifying the existing lakes, streams, and rivers that are impacted by thaw. Here, we describe the current state of knowledge regarding how permafrost thaw affects lentic and lotic systems, exploring the effects of both thermokarst (thawing and collapse of ice-rich permafrost) and deepening of the active layer (the surface soil layer that thaws and refreezes each year). Within thermokarst, we further differentiate between the effects of thermokarst in lowland areas, vs. that on hillslopes. For almost all of the processes that we explore, the effects of thaw vary regionally, and between lake and stream systems. Much of this regional variation is caused by differences in ground ice content, topography, soil type, and permafrost coverage. Together, these modifying variables determine the degree to which permafrost thaw manifests as thermokarst, whether thermokarst leads to slumping or the formation of thermokarst lakes, and the manner in which constituent delivery to freshwater systems is altered by thaw. Differences in thaw-enabled constituent delivery can be considerable, with these modifying variables determining, for example, the balance between delivery of particulate vs. dissolved constituents, and inorganic vs. organic materials. Changes in the composition of thaw-impacted waters, coupled with changes in lake morphology, can strongly affect the physical and optical properties of thermokarst lakes. The ecology of thaw-impacted systems is also likely to change, with thaw-impacted lakes and streams having unique microbiological communities, and showing differences in respiration, primary production, and food web structure that are largely driven by differences in sediment, dissolved organic matter and nutrient delivery. The degree to which thaw enables the delivery of dissolved vs. particulate organic matter, coupled with the composition of that organic matter and the morphology and stratification characteristics of recipient systems will play an important role in determining the balance between the release of organic matter as greenhouse gases (CO2 and CH4), its burial in sediments, and its loss downstream. The magnitude of thaw impacts on northern aquatic ecosystems is increasing, as is the prevalence of thaw-impacted lakes and streams. There is therefore an urgent need to address the key gaps in understanding in order to predict the full effects of permafrost thaw on aquatic ecosystems throughout the Arctic, and their consequential feedbacks to climate.

Modeling thermal dynamics of active layer soils and near-surface permafrost using a fully coupled water and heat transport model

USGS Publications Warehouse

Jiang, Yueyang; Zhuang, Qianlai; O'Donnell, Jonathan A.

2012-01-01

Thawing and freezing processes are key components in permafrost dynamics, and these processes play an important role in regulating the hydrological and carbon cycles in the northern high latitudes. In the present study, we apply a well-developed soil thermal model that fully couples heat and water transport, to simulate the thawing and freezing processes at daily time steps across multiple sites that vary with vegetation cover, disturbance history, and climate. The model performance was evaluated by comparing modeled and measured soil temperatures at different depths. We use the model to explore the influence of climate, fire disturbance, and topography (north- and south-facing slopes) on soil thermal dynamics. Modeled soil temperatures agree well with measured values for both boreal forest and tundra ecosystems at the site level. Combustion of organic-soil horizons during wildfire alters the surface energy balance and increases the downward heat flux through the soil profile, resulting in the warming and thawing of near-surface permafrost. A projection of 21st century permafrost dynamics indicates that as the climate warms, active layer thickness will likely increase to more than 3 meters in the boreal forest site and deeper than one meter in the tundra site. Results from this coupled heat-water modeling approach represent faster thaw rates than previously simulated in other studies. We conclude that the discussed soil thermal model is able to well simulate the permafrost dynamics and could be used as a tool to analyze the influence of climate change and wildfire disturbance on permafrost thawing.

A Field Investigation of Water and Salt Movement in Permafrost and the Active Layer

DTIC Science & Technology

1993-02-01

in the submerged continental shelves of the Arctic and Antarctic land masses where pore water salinities of shelf sediments may exceed that of the...thawed sediments would have wanned at all depths, and permafrost would have started to thaw from both the top and the bottom. Eventually, gas...exploration wells (Osterkamp at al., 1985). Destabilization of gas hydrates (by warming the sediments in the continental shelves) during periods of high

The effect of fire and permafrost interactions on soil carbon accumulation in an upland black spruce ecosystem of interior Alaska: implications for post-thaw carbon loss

Treesearch

Jonathan A. O' Donnell; Jennifer W. Harden; A. David McGuire; Mikhail Z. Kanevskiy; M. Torre Jorgenson; Xiaomei Xu

2010-01-01

High-latitude regions store large amounts of organic carbon (OC) in active-layer soils and permafrost, accounting for nearly half of the global belowground OC pool. In the boreal region, recent warming has promoted changes in the fire regime, which may exacerbate rates of permafrost thaw and alter soil OC dynamics in both organic and mineral soil. We examined how...

Reviews and syntheses: Effects of permafrost thaw on Arctic aquatic ecosystems

NASA Astrophysics Data System (ADS)

Vonk, J. E.; Tank, S. E.; Bowden, W. B.; Laurion, I.; Vincent, W. F.; Alekseychik, P.; Amyot, M.; Billet, M. F.; Canário, J.; Cory, R. M.; Deshpande, B. N.; Helbig, M.; Jammet, M.; Karlsson, J.; Larouche, J.; MacMillan, G.; Rautio, M.; Anthony, K. M. Walter; Wickland, K. P.

2015-12-01

The Arctic is a water-rich region, with freshwater systems covering about 16 % of the northern permafrost landscape. Permafrost thaw creates new freshwater ecosystems, while at the same time modifying the existing lakes, streams, and rivers that are impacted by thaw. Here, we describe the current state of knowledge regarding how permafrost thaw affects lentic (still) and lotic (moving) systems, exploring the effects of both thermokarst (thawing and collapse of ice-rich permafrost) and deepening of the active layer (the surface soil layer that thaws and refreezes each year). Within thermokarst, we further differentiate between the effects of thermokarst in lowland areas vs. that on hillslopes. For almost all of the processes that we explore, the effects of thaw vary regionally, and between lake and stream systems. Much of this regional variation is caused by differences in ground ice content, topography, soil type, and permafrost coverage. Together, these modifying factors determine (i) the degree to which permafrost thaw manifests as thermokarst, (ii) whether thermokarst leads to slumping or the formation of thermokarst lakes, and (iii) the manner in which constituent delivery to freshwater systems is altered by thaw. Differences in thaw-enabled constituent delivery can be considerable, with these modifying factors determining, for example, the balance between delivery of particulate vs. dissolved constituents, and inorganic vs. organic materials. Changes in the composition of thaw-impacted waters, coupled with changes in lake morphology, can strongly affect the physical and optical properties of thermokarst lakes. The ecology of thaw-impacted lakes and streams is also likely to change; these systems have unique microbiological communities, and show differences in respiration, primary production, and food web structure that are largely driven by differences in sediment, dissolved organic matter, and nutrient delivery. The degree to which thaw enables the delivery of dissolved vs. particulate organic matter, coupled with the composition of that organic matter and the morphology and stratification characteristics of recipient systems will play an important role in determining the balance between the release of organic matter as greenhouse gases (CO2 and CH4), its burial in sediments, and its loss downstream. The magnitude of thaw impacts on northern aquatic ecosystems is increasing, as is the prevalence of thaw-impacted lakes and streams. There is therefore an urgent need to quantify how permafrost thaw is affecting aquatic ecosystems across diverse Arctic landscapes, and the implications of this change for further climate warming.

Permafrost Thaw increases Emissions of Nitrous Oxide from Subarctic Peatlands

NASA Astrophysics Data System (ADS)

Voigt, C.; Marushchak, M. E.; Lamprecht, R. E.; Jackowicz-Korczynski, M.; Lindgren, A.; Mastepanov, M.; Christensen, T. R.; Granlund, L.; Tahvanainen, T.; Martikainen, P. J.; Biasi, C.

2017-12-01

Permafrost soils in the Arctic are thawing, exposing not only carbon but also large nitrogen stocks. The decomposition of this vast pool of long-term immobile C and N stocks results in the release of greenhouse gases to the atmosphere. Among these, carbon dioxide (CO2) and methane (CH4) are being studied extensively, and gaseous C release from thawing permafrost is known to be substantial. Most recent studies, however, show that Arctic soils may further be a relevant source of the strong greenhouse gas nitrous oxide (N2O). As N2O is almost 300 times more powerful in warming the climate than CO2 based on a 100-yr time horizon, the release of N2O from thawing permafrost could create a significant non-carbon permafrost-climate feedback. To study the effect of permafrost thaw on N2O fluxes, we collected peat mesocosms from a Subarctic permafrost peatland, and subjected these intact soil-plant systems to sequential thawing from the top of the active layer down to the upper permafrost layer. Measurements of N2O fluxes were coupled with detailed soil analyses and process studies. Since N2O fluxes are highly dependent on moisture conditions and vegetation cover, we applied two distinct moisture treatments (dry vs. wet) and simulated permafrost thaw in vegetated as well as in naturally bare mesocosms. Under dry conditions, permafrost thaw clearly increased N2O emissions. We observed the largest post-thaw emissions from bare peat surfaces, a typical landform in subarctic peatlands previously identified as hot spots for Arctic N2O emissions. There, permafrost thaw caused a five-fold increase in emissions (0.56 vs. 2.81 mg N2O m-2 d-1). While water-logged conditions suppressed N2O emissions, the presence of vegetation lowered, but did not prevent post-thaw N2O release. Based on these findings, we show that one fourth of the Arctic land area could be vulnerable for N2O emissions when permafrost thaws. Our results demonstrate that Arctic N2O emissions may be larger than previously thought, and that the source strength will be crucially governed by moisture conditions at times of thaw, as well as on future changes in vegetation coverage.

Assessment of the subsurface hydrology of the UIC-NARL main camp, near Barrow, Alaska, 1993-94

USGS Publications Warehouse

McCarthy, K.A.; Solin, G.L.

1995-01-01

Imikpuk Lake serves as the drinking-water source for the Ukpeagvik Inupiat Corporation-National Arctic Research Laboratory (UIC-NARL, formerly known as the Naval Arctic Research Laboratory) near Barrow, Alaska. Previously acceptable hazardous-waste disposal practices and accidental releases of various fuels and solvents during the past several decades have resulted in contamination of soil and ground water in the vicinity of the lake. As part of an assessment of the risk that subsurface contamination poses to the quality of water in the lake, the subsurface hydrology of the UIC-NARL main camp was examined. The study area is located approximately 530 kilometers north of the Arctic Circle, on the northern coast of Alaska, and the short annual thaw season and the presence of shallow, areally continuous permafrost restrict hydrologic processes. A transient ground-water system is present within the active layer-the shallow subsurface layer that thaws each summer and refreezes each winter. Water-level and thaw-depth data collected during the summers of 1993 and 1994 show that the configurations of both the water table and the subsurface frost govern the ground- water flow system in the UIC-NARL main camp and indicate that recharge to and discharge from the system are small. Spatial irregularities in the vertical extent of the active layer result from variations in land-surface elevation, variations in soil type, and the presence of buildings and other structures that either act as a heat source or block heat transfer to and from the subsurface. Distinct features in the active-layer hydrologic system in the UIC-NARL main camp include a permafrost ridge, which generally acts as a flow-system divide between the Arctic Ocean and inland water bodies; a mound in the water table, which indicates increased impedance to ground- water flow toward Imikpuk Lake and acts as a flow-system divide between the lake and Middle Salt Lagoon; and a depression in the water table, which suggests a local breach in the permafrost ridge that allows some ground water to flow directly from the main camp to the Arctic Ocean. Similar thaw depths and water-table elevations were measured during the summers of 1993 and 1994, and little change occurred in the thickness of the ground-water zone between mid- and late-thaw- season measurements. These data suggest that the system is in a state of quasi-equilibrium and that ground-water discharge is small. The observed drop in the water table as the active layer develops over the summer is probably largely the result of evapotranspiration losses rather than system outflow.

BERG2 Micro-computer Estimation of Freeze and Thaw Depths and Thaw Consolidation (PDF file)

DOT National Transportation Integrated Search

1989-06-01

The BERG2 microcomputer program uses a methology similar to the Modified Berggren method (Aldrich and Paynter, 1953) to estimate the freeze and thaw depths in layered soil systems. The program also provides an estimate of the thaw consolidation in ic...

Protein and solute distribution in drug substance containers during frozen storage and post-thawing: a tool to understand and define freezing-thawing parameters in biotechnology process development.

PubMed

Kolhe, Parag; Badkar, Advait

2011-01-01

Active pharmaceutical ingredient for biotechnology-based drugs, commonly known as drug substance (DS), is often stored frozen for longer shelf-life. Freezing DS enhances stability by slowing down reaction rates that lead to protein instability, minimizes the risk of microbial growth, and eliminates the risk of transport-related stress. High density polyethylene bottles are commonly used for storing monoclonal antibody DS due to good mechanical stress/strain resistant properties even at low temperatures. Despite the aforementioned advantages for frozen storage of DS, this is not devoid of risks. Proteins are known to undergo ice-water surface denaturation, cryoconcentration, and cold denaturation during freezing. A systematic investigation was performed to better understand the protein and solute distribution along with potential of aggregate formation during freeze and thaw process. A significant solute and protein concentration gradient was observed for both frozen and thawed DS bottles. In case of thawed DS, cryoconcentration was localized in the bottom layer and a linear increase in concentration as a function of liquid depth was observed. On the other hand, for frozen DS, a "bell shaped" cryoconcentration distribution was observed between the bottom layers and centre position. A cryoconcentration of almost three-fold was observed for frozen DS in the most concentrated part when freezing was conducted at -20 and -40 °C and 2.5-fold cryoconcentration was observed in the thawed DS before mixing. The information obtained in this study is critical to design freeze thaw experiments, storage condition determination, and process improvement in manufacturing environment. Copyright © 2011 American Institute of Chemical Engineers (AIChE).

Frost Tables, Barrow, Alaska, NGEE Areas B, C and D for 2012, 2013, 2014, Final Version, 20150312

DOE Data Explorer

Liljedahl, Anna

2014-03-24

This dataset represent spatially intensive thaw depth surveys with individual point measurements spaced approximately 0.5 m apart. The three approximate10x10m grids cover an ice wedge and a portion of its two neighboring polygons. The file contains thaw depth, frost table elevation, ground surface elevation, active layer depth and surface water inundation across three seasons (2012, 2013 and 2014) at Barrow NGEE Areas B, C and D.

Methanogen community composition and rates of methane consumption in Canadian High Arctic permafrost soils.

PubMed

Allan, J; Ronholm, J; Mykytczuk, N C S; Greer, C W; Onstott, T C; Whyte, L G

2014-04-01

Increasing permafrost thaw, driven by climate change, has the potential to result in organic carbon stores being mineralized into carbon dioxide (CO2) and methane (CH4) through microbial activity. This study examines the effect of increasing temperature on community structure and metabolic activity of methanogens from the Canadian High Arctic, in an attempt to predict how warming will affect microbially controlled CH4 soil flux. In situ CO2 and CH4 flux, measured in 2010 and 2011 from ice-wedge polygons, indicate that these soil formations are a net source of CO2 emissions, but a CH4 sink. Permafrost and active layer soil samples were collected at the same sites and incubated under anaerobic conditions at warmer temperatures, with and without substrate amendment. Gas flux was measured regularly and indicated an increase in CH4 flux after extended incubation. Pyrosequencing was used to examine the effects of an extended thaw cycle on methanogen diversity and the results indicate that in situ methanogen diversity, based on the relative abundance of the 16S ribosomal ribonucleic acid (rRNA) gene associated with known methanogens, is higher in the permafrost than in the active layer. Methanogen diversity was also shown to increase in both the active layer and permafrost soil after an extended thaw. This study provides evidence that although High Arctic ice-wedge polygons are currently a sink for CH4, higher arctic temperatures and anaerobic conditions, a possible result of climate change, could result in this soil becoming a source for CH4 gas flux. © 2013 Society for Applied Microbiology and John Wiley & Sons Ltd.

Historical and Possible Future Changes in Permafrost and Active Layer Thickness in Alaska: Implications to Landscape Changes and Permafrost Carbon Pool.

NASA Astrophysics Data System (ADS)

Marchenko, S. S.; Helene, G.; Euskirchen, E. S.; Breen, A. L.; McGuire, D.; Rupp, S. T.; Romanovsky, V. E.; Walsh, J. E.

2017-12-01

The Soil Temperature and Active Layer Thickness (ALT) Gridded Data was developed to quantify the nature and rate of permafrost degradation and its impact on ecosystems, infrastructure, CO2 and CH4 fluxes and net C storage following permafrost thaw across Alaska. To develop this database, we used the process-based permafrost dynamics model GIPL2 developed in the Geophysical Institute Permafrost Lab, UAF and which is the permafrost module of the Integrated Ecosystem Model (IEM) for Alaska and Northwest Canada. The climate forcing data for simulations were developed by the Scenarios Network for Alaska and Arctic Planning (SNAP, http://www.snap.uaf.edu/). These data are based on the historical CRU3.1 data set for the retrospective analysis period (1901-2009) and the five model averaged data were derived from the five CMIP5/AR5 IPCC Global Circulation Models that performed the best in Alaska and other northern regions: NCAR-CCSM4, GFDL-CM3, GISS-E2-R, IPSL-CM5A-LR, MRI-CGCM3. A composite of all five-model outputs for the RCP4.5 and RCP8.5 were used in these particular permafrost dynamics simulations. Data sets were downscaled to a 771 m resolution, using the Parameter-elevation Regressions on Independent Slopes Model (PRISM) climatology. Additional input data (snow characteristics, soil thermal properties, soil water content, organic matter accumulation or its loss due to fire, etc.) came from the Terrestrial Ecosystem Model (TEM) and the ALFRESCO (ALaska FRame-based EcoSystem COde) model simulations. We estimated the dynamics of permafrost temperature, active layer thickness, area occupied by permafrost, and volume of seasonally thawed soils within the 4.75 upper meters (original TEM soil column) across the Alaska domain. Simulations of future changes in permafrost indicate that, by the end of the 21st century, late-Holocene permafrost in Alaska will be actively thawing at all locations and that some Late Pleistocene carbon-rich peatlands underlain by permafrost will start to thaw at some locations. The modeling results also indicate how different types of ecosystems affect the thermal state of permafrost and its stability. The release of carbon and the net effect of this thawing depends on the balance between increased productivity and respiration, which depend, in part, on soil moisture dynamics.

Freeze/thaw conditions at periglacial landforms in Kapp Linné, Svalbard, investigated using field observations, in situ, and radar satellite monitoring

NASA Astrophysics Data System (ADS)

Eckerstorfer, M.; Malnes, E.; Christiansen, H. H.

2017-09-01

In periglacial landscapes, snow dynamics and microtopography have profound implications of freeze-thaw conditions and thermal regime of the ground. We mapped periglacial landforms at Kapp Linné, central Svalbard, where we chose six widespread landforms (solifluction sheet, nivation hollow, palsa and peat in beach ridge depressions, raised marine beach ridge, and exposed bedrock ridge) as study sites. At these six landforms, we studied ground thermal conditions, freeze-thaw cycles, and snow dynamics using a combination of in situ monitoring and C-band radar satellite data in the period 2005-2012. Based on these physical parameters, the six studied landforms can be classified into raised, dry landforms with minor ground ice content and a thin, discontinuous snow cover and into wet landforms with high ice content located in the topographical depressions in-between with medium to thick snow cover. This results in a differential snow-melting period inferred from the C-band radar satellite data, causing the interseasonal and interlandform variability in the onset of ground surface thawing once the ground becomes snow free. Therefore, variability also exists in the period of thawed ground surface conditions. However, the length of the season with thawed ground surface conditions does not determine the mean annual ground surface temperature, it only correlates well with the active layer depths. From the C-band radar satellite data series, measured relative backscatter trends hint toward a decrease in snow cover through time and a more frequent presence of ice layers from mid-winter rain on snow events at Kapp Linné, Svalbard.

The effect of fire and permafrost interactions on soil carbon accumulation in an upland black spruce ecosystem of interior Alaska: Implications for post-thaw carbon loss

USGS Publications Warehouse

O'Donnell, J. A.; Harden, J.W.; McGuire, A.D.; Kanevskiy, M.Z.; Jorgenson, M.T.; Xu, X.

2011-01-01

High-latitude regions store large amounts of organic carbon (OC) in active-layer soils and permafrost, accounting for nearly half of the global belowground OC pool. In the boreal region, recent warming has promoted changes in the fire regime, which may exacerbate rates of permafrost thaw and alter soil OC dynamics in both organic and mineral soil. We examined how interactions between fire and permafrost govern rates of soil OC accumulation in organic horizons, mineral soil of the active layer, and near-surface permafrost in a black spruce ecosystem of interior Alaska. To estimate OC accumulation rates, we used chronosequence, radiocarbon, and modeling approaches. We also developed a simple model to track long-term changes in soil OC stocks over past fire cycles and to evaluate the response of OC stocks to future changes in the fire regime. Our chronosequence and radiocarbon data indicate that OC turnover varies with soil depth, with fastest turnover occurring in shallow organic horizons (~60 years) and slowest turnover in near-surface permafrost (>3000 years). Modeling analysis indicates that OC accumulation in organic horizons was strongly governed by carbon losses via combustion and burial of charred remains in deep organic horizons. OC accumulation in mineral soil was influenced by active layer depth, which determined the proportion of mineral OC in a thawed or frozen state and thus, determined loss rates via decomposition. Our model results suggest that future changes in fire regime will result in substantial reductions in OC stocks, largely from the deep organic horizon. Additional OC losses will result from fire-induced thawing of near-surface permafrost. From these findings, we conclude that the vulnerability of deep OC stocks to future warming is closely linked to the sensitivity of permafrost to wildfire disturbance. ?? 2010 Blackwell Publishing Ltd.

Characterizing Groundwater Sources of Organic Matter to Arctic Coastal Waters

NASA Astrophysics Data System (ADS)

Connolly, C. T.; Spencer, R. G.; Cardenas, M. B.; Bennett, P. C.; McNichol, A. P.; McClelland, J. W.

2016-12-01

The Arctic is projected to transition from a runoff-dominated system to a groundwater-dominated system as permafrost thaws due to climate change. This fundamental shift in hydrology is expected to increase groundwater flow to Arctic coastal waters, which may be a significant source of dissolved organic matter (DOM) to these waters—even under present conditions—that has been largely overlooked. Here we quantify and elucidate sources of groundwater DOM inputs to lagoons along the eastern Alaskan Beaufort Sea coast using an approach that combines concentration measurements and radiocarbon dating of groundwater, soil profiles, and soil leachable dissolved organic carbon (DOC). Samples were collected in late summer, when soil thaw depths (active layer) were near their maximum extent. As anticipated, the radiocarbon age of bulk soil organic matter increased with depth (modern - 6,100 yBP), while the amount of extractable DOC decreased with depth within the active layer. However, amounts of extractable DOC increased dramatically in thawed permafrost samples collected directly below the actively layer. Concentrations of DOM in groundwater (ranging from 902 to 5,118 μmolL-1 DOC) are one to two orders of magnitude higher than those measured in lagoons and nearby river water. In contrast, the 14C-DOC ages of groundwater (1,400 ± 718 s.d. yBP), lagoon water (1,750 yBP), and river water (1,610 yBP) are comparable. Together these results suggest that: (1) groundwater provides a highly concentrated input of old DOC to Arctic coastal waters; (2) groundwater DOM is likely sourced from organic matter spanning the entire soil profile; and (3) the DOM in rivers along the eastern Alaskan Beaufort Sea coast during late summer is strongly influenced by groundwater sources, but is much lower in concentration due to photo-mineralization and/or biological consumption. These results are key for assessing how changes in land-ocean export of organic matter as permafrost thaws will change into the future with clear ramifications for Arctic coastal environments.

Single-layer centrifugation through PureSperm® 80 selects improved quality spermatozoa from frozen-thawed dog semen.

PubMed

Dorado, J; Alcaraz, L; Gálvez, M J; Acha, D; Ortiz, I; Urbano, M; Hidalgo, M

2013-08-01

The aim of this study was to investigate whether single-layer centrifugation (SLC) with PureSperm® 80 could select good quality spermatozoa, including those with specific motility patterns, from doses of frozen dog semen. Semen from 5 dogs was collected and cryopreserved following a standard protocol. After thawing, semen samples were divided into two aliquots: one of them was used as control and the other one processed by SLC. Assessment of sperm motility (assessed by computer-assisted semen analysis), morphology (Diff-Quick staining) and viability (triple fluorescent stain of propidium iodine/isothiocyanate-labeled peanut (Arachis hypogaea) agglutinin/Rhodamine 123), were performed on aliquots of fresh semen, frozen-thawed control and frozen-thawed SLC treated samples. A multivariate clustering procedure separated 26,051 motile spermatozoa into three subpopulations (sP): sP1 consisting of highly active but non-progressive spermatozoa (40.3%), sP2 consisting of spermatozoa with high velocity and progressive motility (30.0%), and sP3 consisting of poorly active and non-progressive spermatozoa (29.7%). SLC with PureSperm® 80 yielded sperm suspensions with improved motility, morphology, viability and acrosome integrity (P<0.001). The frozen-thawed SLC treated samples were enriched in sP2, reaching a proportion of 44.1% of the present spermatozoa. From these results, we concluded that SLC with PureSperm® 80 may be an alternative and successful method for improving the quality of frozen-thawed dog spermatozoa. Moreover, sP2 (high-speed and progressive spermatozoa) was more frequently observed after SLC. Finally, this study also demonstrated that the general motile sperm structure present in dogs remained constant despite the effect caused by either cryopreservation or separation by SLC through PureSperm® 80. Copyright © 2013 Elsevier B.V. All rights reserved.

DOE Office of Scientific and Technical Information (OSTI.GOV)

James, S. R.; Knox, H. A.; Abbott, R. E.

Cross correlations of seismic noise can potentially record large changes in subsurface velocity due to permafrost dynamics and be valuable for long-term Arctic monitoring. We applied seismic interferometry, using moving window cross-spectral analysis (MWCS), to 2 years of ambient noise data recorded in central Alaska to investigate whether seismic noise could be used to quantify relative velocity changes due to seasonal active-layer dynamics. The large velocity changes (>75%) between frozen and thawed soil caused prevalent cycle-skipping which made the method unusable in this setting. We developed an improved MWCS procedure which uses a moving reference to measure daily velocity variationsmore » that are then accumulated to recover the full seasonal change. This approach reduced cycle-skipping and recovered a seasonal trend that corresponded well with the timing of active-layer freeze and thaw. Lastly, this improvement opens the possibility of measuring large velocity changes by using MWCS and permafrost monitoring by using ambient noise.« less

InSAR detects increase in surface subsidence caused by an Arctic tundra fire

USGS Publications Warehouse

Liu, Lin; Jafarov, Elchin E.; Schaefer, Kevin M.; Jones, Benjamin M.; Zebker, Howard A.; Williams, Christopher A.; Rogan, John; Zhang, Tingjun

2014-01-01

Wildfire is a major disturbance in the Arctic tundra and boreal forests, having a significant impact on soil hydrology, carbon cycling, and permafrost dynamics. This study explores the use of the microwave Interferometric Synthetic Aperture Radar (InSAR) technique to map and quantify ground surface subsidence caused by the Anaktuvuk River fire on the North Slope of Alaska. We detected an increase of up to 8 cm of thaw-season ground subsidence after the fire, which is due to a combination of thickened active layer and permafrost thaw subsidence. Our results illustrate the effectiveness and potential of using InSAR to quantify fire impacts on the Arctic tundra, especially in regions underlain by ice-rich permafrost. Our study also suggests that surface subsidence is a more comprehensive indicator of fire impacts on ice-rich permafrost terrain than changes in active layer thickness alone.

Exploring the ground ice recharge near permafrost table on the central Qinghai-Tibet Plateau using chemical and isotopic data

NASA Astrophysics Data System (ADS)

Wang, Weihua; Wu, Tonghua; Zhao, Lin; Li, Ren; Zhu, Xiaofan; Wang, Wanrui; Yang, Shuhua; Qin, Yanhui; Hao, Junmin

2018-05-01

Thawing permafrost on the Qinghai-Tibet Plateau (QTP) has great impacts on the local hydrological process by way of causing ground ice to thaw. Until now there is little knowledge on ground ice hydrology near permafrost table under a warming climate. This study applied stable tracers (isotopes and chloride) and hydrograph separation model to quantify the sources of ground ice near permafrost table in continuous permafrost regions of the central QTP. The results indicated that the ground ice near permafrost table was mainly supplied by active layer water and permafrost water, accounting for 58.9 to 87.0% and 13.0 to 41.1%, respectively, which implying that the active layer was the dominant source. The contribution rates from the active layer to the ground ice in alpine meadow (59 to 69%) was less than that in alpine steppe (70 to 87%). It showed well-developed hydrogeochemical depth gradients, presenting depleted isotopes and positive chemical gradients with depth within the soil layer. The effects of evaporation and freeze-out fractionation on the soil water and ground ice were evident. The results provide additional insights into ground ice sources and cycling near permafrost table in permafrost terrain, and would be helpful for improving process-based detailed hydrologic models under the occurring global warming.

Simulation of Soil Frost and Thaw Fronts Dynamics with Community Land Model 4.5

NASA Astrophysics Data System (ADS)

Gao, J.; Xie, Z.

2016-12-01

Freeze-thaw processes in soils, including changes in frost and thaw fronts (FTFs) , are important physical processes. The movement of FTFs affects soil water and thermal characteristics, as well as energy and water exchanges between land surface and the atmosphere, and then the land surface hydrothermal process. In this study, a two-directional freeze and thaw algorithm for simulating FTFs is incorporated into the community land surface model CLM4.5, which is called CLM4.5-FTF. The simulated FTFs depth and soil temperature of CLM4.5-FTF compared well with the observed data both in D66 station (permafrost) and Hulugou station (seasonally frozen soil). Because the soil temperature profile within a soil layer can be estimated according to the position of FTFs, CLM4.5 performed better in soil temperature simulation. Permafrost and seasonally frozen ground conditions in China from 1980 to 2010 were simulated using the CLM4.5-FTF. Numerical experiments show that the spatial distribution of simulated maximum frost depth by CLM4.5-FTF has seasonal variation obviously. Significant positive active-layer depth trends for permafrost regions and negative maximum freezing depth trends for seasonal frozen soil regions are simulated in response to positive air temperature trends except west of Black Sea.

Climate Change and Thawing Permafrost in Two Iñupiaq Communities of Alaska's Arctic: Observations, Implications, and Resilience

NASA Astrophysics Data System (ADS)

Woodward, A.; Kofinas, G.

2013-12-01

For thousands of years the Iñupiat of northern Alaska have relied on ecosystems underlain by permafrost for material and cultural resources. As permafrost thaws across the Arctic, these social-ecological systems are changing rapidly. Community-based research and extensive local knowledge of Iñupiaq villagers offer unique and valuable contributions to understanding permafrost change and its implications for humans. We partnered with two Iñupiaq communities in Alaska's Arctic to investigate current and potential effects of thawing permafrost on social-ecological systems. Anaktuvuk Pass is situated on thaw-stable consolidated gravel in the Brooks Range, while Selawik rests on ice-rich permafrost in Beringia lowland tundra. Using the transdisciplinary approach of resilience theory and mixed geophysical and ethnographic methods, we measured active layer thaw depths and documented local knowledge about climate and permafrost change. Thaw depths were greater overall in Selawik. Residents of both communities reported a variety of changes in surface features, hydrology, weather, flora, and fauna that they attribute to thawing permafrost and / or climate change. Overall, Selawik residents described more numerous and extreme examples of such changes, expressed higher degrees of certainty that change is occurring, and anticipated more significant and negative implications for their way of life than did residents of Anaktuvuk Pass. Of the two villages, Selawik faces greater and more immediate challenges to the resilience of its social-ecological system as permafrost thaws.

Seasonal electrical resistivity surveys of a coastal bluff, Barter Island, North Slope Alaska

USGS Publications Warehouse

Swarzenski, Peter W.; Johnson, Cordell; Lorenson, Thomas; Conaway, Christopher H.; Gibbs, Ann E.; Erikson, Li; Richmond, Bruce M.; Waldrop, Mark P.

2016-01-01

Select coastal regions of the North Slope of Alaska are experiencing high erosion rates that can be attributed in part to recent warming trends and associated increased storm intensity and frequency. The upper sediment column of the coastal North Slope of Alaska can be described as continuous permafrost underlying a thin (typically less than 1–2 m) active layer that responds variably to seasonal thaw cycles. Assessing the temporal and spatial variability of the active layer and underlying permafrost is essential to better constrain how heightened erosion may impact material fluxes to the atmosphere and the coastal ocean, and how enhanced thaw cycles may impact the stability of the coastal bluffs. In this study, multi-channel electrical resistivity tomography (ERT) was used to image shallow subsurface features of a coastal bluff west of Kaktovik, on Barter Island, northeast Alaska. A comparison of a suite of paired resistivity surveys conducted in early and late summer 2014 provided detailed information on how the active layer and permafrost are impacted during the short Arctic summer. Such results are useful in the development of coastal resilience models that tie together fluvial, terrestrial, climatic, geologic, and oceanographic forcings on shoreline stability.

Seasonal thaw settlement at drained thermokarst lake basins, Arctic Alaska

USGS Publications Warehouse

Liu, Lin; Schaefer, Kevin; Gusmeroli, Alessio; Grosse, Guido; Jones, Benjamin M.; Zhang, Tinjun; Parsekian, Andrew; Zebker, Howard

2014-01-01

Drained thermokarst lake basins (DTLBs) are ubiquitous landforms on Arctic tundra lowland. Their dynamic states are seldom investigated, despite their importance for landscape stability, hydrology, nutrient fluxes, and carbon cycling. Here we report results based on high-resolution Interferometric Synthetic Aperture Radar (InSAR) measurements using space-borne data for a study area located on the North Slope of Alaska near Prudhoe Bay, where we focus on the seasonal thaw settlement within DTLBs, averaged between 2006 and 2010. The majority (14) of the 18 DTLBs in the study area exhibited seasonal thaw settlement of 3–4 cm. However, four of the DTLBs examined exceeded 4 cm of thaw settlement, with one basin experiencing up to 12 cm. Combining the InSAR observations with the in situ active layer thickness measured using ground penetrating radar and mechanical probing, we calculated thaw strain, an index of thaw settlement strength along a transect across the basin that underwent large thaw settlement. We found thaw strains of 10–35% at the basin center, suggesting the seasonal melting of ground ice as a possible mechanism for the large settlement. These findings emphasize the dynamic nature of permafrost landforms, demonstrate the capability of the InSAR technique to remotely monitor surface deformation of individual DTLBs, and illustrate the combination of ground-based and remote sensing observations to estimate thaw strain. Our study highlights the need for better description of the spatial heterogeneity of landscape-scale processes for regional assessment of surface dynamics on Arctic coastal lowlands.

Characterization and Modeling Of Microbial Carbon Metabolism In Thawing Permafrost

NASA Astrophysics Data System (ADS)

Graham, D. E.; Phelps, T. J.; Xu, X.; Carroll, S.; Jagadamma, S.; Shakya, M.; Thornton, P. E.; Elias, D. A.

2012-12-01

Increased annual temperatures in the Arctic are warming the surface and subsurface, resulting in thawing permafrost. Thawing exposes large pools of buried organic carbon to microbial degradation, increasing greenhouse gas generation and emission. Most global-scale land-surface models lack depth-dependent representations of carbon conversion and GHG transport; therefore they do not adequately describe permafrost thawing or microbial mineralization processes. The current work was performed to determine how permafrost thawing at moderately elevated temperatures and anoxic conditions would affect CO2 and CH4 generation, while parameterizing depth-dependent GHG production processes with respect to temperature and pH in biogeochemical models. These enhancements will improve the accuracy of GHG emission predictions and identify key biochemical and geochemical processes for further refinement. Three core samples were obtained from discontinuous permafrost terrain in Fairbanks, AK with a mean annual temperature of -3.3 °C. Each core was sectioned into surface/near surface (0-0.8 m), active layer (0.8-1.6 m), and permafrost (1.6-2.2 m) horizons, which were homogenized for physico-chemical characterization and microcosm construction. Surface samples had low pH values (6.0), low water content (18% by weight), low organic carbon (0.8%), and high C:N ratio (43). Active layer samples had higher pH values (6.4), higher water content (34%), more organic carbon (1.4%) and a lower C:N ratio (24). Permafrost samples had the highest pH (6.5), highest water content (46%), high organic carbon (2.5%) and the lowest C:N ratio (19). Most organic carbon was quantified as labile or intermediate pool versus stable pool in each sample, and all samples had low amounts of carbonate. Surface layer microcosms, containing 20 g sediment in septum-sealed vials, were incubated under oxic conditions, while similar active and permafrost layer samples were anoxic. These microcosms were incubated at -2, +3, or +5 °C for 6 months. The pH decreased in all samples (5.5 to 5.9). The proportions of carbon in labile and intermediate turnover pools from permafrost samples decreased during incubation, while microbial biomass carbon increased in all cases. Microcosm samples and original core material were analyzed by 16S rDNA pyrosequencing and showed increased populations of bacteria that ferment simple and complex carbohydrates, as well as acidophilic bacteria. Microbial diversity declined in permafrost samples. Concentrations of CO2 and CH4 were measured monthly by gas chromatography. CO2 production was highest in the surface/near surface incubations (4-14%) while CH4 was undetectable. Active layer sediments produced considerably less CO2 (0.2-0.7%) but CH4 was detected up to 0.25%. Concentrations of CO2 found in the deep permafrost incubations were comparable to those in the active layer, while CH4 was considerably higher ranging from 0.2-0.6%. Overall, the CO2 generation rate (0.02-0.12 μmol/g/month) was roughly 50 times that of methanogenesis (0.002-0.007 μmol/g/month). GHG levels peaked after 4 months, and the decreasing pH suggested that organic acid accumulation could control GHG biogenesis. Surprisingly, increasing temperature and water content did not necessarily increase GHG emission rates or proportions of CO2 and CH4.

The Nitrate Inventory of Unsaturated Soils at the Barrow Environmental Observatory: Current Conditions and Potential Future Trajectories

NASA Astrophysics Data System (ADS)

Heikoop, J. M.; Newman, B. D.; Arendt, C. A.; Andresen, C. G.; Lara, M. J.; Wainwright, H. M.; Throckmorton, H.; Graham, D. E.; Wilson, C. J.; Wullschleger, S. D.; Romanovsky, V. E.; Bolton, W. R.; Wales, N. A.; Rowland, J. C.

2016-12-01

Studies conducted in the Barrow Environmental Observatory under the auspices of the United States Department of Energy Next Generation Ecosystem Experiment (NGEE) - Arctic have demonstrated measurable nitrate concentrations ranging from <1 to 17 mg/L in the unsaturated centers of high-centered polygons. Conversely, nitrate concentrations in saturated areas of polygonal terrain were generally below the limit of detection. Isotopic analysis of this nitrate demonstrates that it results from microbial nitrification. The study site currently comprises mostly saturated soils. Several factors, however, could lead to drying of soils on different time scales. These include 1) topographic inversion of polygonal terrain associated with ice-wedge degradation, 2) increased connectivity and drainage of polygon troughs, similarly related to the thawing and subsidence of ice-wedges, and 3) near-surface soil drainage associated with wide-spread permafrost thaw and active layer deepening. Using a GIS approach we will estimate the current inventory of nitrate in the NGEE intensive study site using soil moisture data and existing unsaturated zone nitrate concentration data and new concentration data collected in the summer of 2016 from high- and flat-centered polygons and the elevated rims of low-centered polygons. Using this baseline, we will present potential future inventories based on various scenarios of active layer thickening and landscape geomorphic reorganization associated with permafrost thaw. Predicted inventories will be based solely on active layer moisture changes, ignoring for now potential changes associated with mineralization and nitrification of previously frozen old organic matter and changes in vegetation communities. We wish to demonstrate that physical landscape changes alone could have a profound effect on future nitrate availability. Nitrate data from recent NGEE campaigns in the Seward Peninsula of Alaska will also be presented.

Field information links permafrost carbon to physical vulnerabilities of thawing

NASA Astrophysics Data System (ADS)

Harden, Jennifer W.; Koven, Charles D.; Ping, Chien-Lu; Hugelius, Gustaf; David McGuire, A.; Camill, Phillip; Jorgenson, Torre; Kuhry, Peter; Michaelson, Gary J.; O'Donnell, Jonathan A.; Schuur, Edward A. G.; Tarnocai, Charles; Johnson, Kristopher; Grosse, Guido

2012-08-01

Deep soil profiles containing permafrost (Gelisols) were characterized for organic carbon (C) and total nitrogen (N) stocks to 3 m depths. Using the Community Climate System Model (CCSM4) we calculate cumulative distributions of active layer thickness (ALT) under current and future climates. The difference in cumulative ALT distributions over time was multiplied by C and N contents of soil horizons in Gelisol suborders to calculate newly thawed C and N. Thawing ranged from 147 PgC with 10 PgN by 2050 (representative concentration pathway RCP scenario 4.5) to 436 PgC with 29 PgN by 2100 (RCP 8.5). Organic horizons that thaw are vulnerable to combustion, and all horizon types are vulnerable to shifts in hydrology and decomposition. The rates and extent of such losses are unknown and can be further constrained by linking field and modelling approaches. These changes have the potential for strong additional loading to our atmosphere, water resources, and ecosystems.

Field information links permafrost carbon to physical vulnerabilities of thawing

USGS Publications Warehouse

Harden, Jennifer W.; Koven, Charles; Ping, Chien-Lu; Hugelius, Gustaf; McGuire, A. David; Camill, P.; Jorgenson, Torre; Kuhry, Peter; Michaelson, Gary; O'Donnell, Jonathan A.; Schuur, Edward A.G.; Tamocai, Charles; Johnson, Kevin; Grosse, G.

2012-01-01

Deep soil profiles containing permafrost (Gelisols) were characterized for organic carbon (C) and total nitrogen (N) stocks to 3m depths. Using the Community Climate System Model (CCSM4) we calculate cumulative probability functions (PDFs) for active layer depths under current and future climates. The difference in PDFs over time was multiplied by C and N contents of soil horizons in Gelisol suborders to calculate newly thawed C and N, Thawing ranged from 147 PgC with 10 PgN by 2050 (representative concentration pathway RCP scenario 4.5) to 436 PgC with 29 PgN by 2100 (RCP 8.5). Organic horizons that thaw are vulnerable to combustion, and all horizon types are vulnerable to shifts in hydrology and decomposition. The rates and extent of such losses are unknown and can be further constrained by linking field and modelling approaches. These changes have the potential for strong additional loading to our atmosphere, water resources, and ecosystems.

Geophysical imaging and thermal modeling of subsurface morphology and thaw evolution of discontinuous permafrost

NASA Astrophysics Data System (ADS)

McClymont, Alastair F.; Hayashi, Masaki; Bentley, Laurence R.; Christensen, Brendan S.

2013-09-01

our current understanding of permafrost thaw in subarctic regions in response to rising air temperatures, little is known about the subsurface geometry and distribution of discontinuous permafrost bodies in peat-covered, wetland-dominated terrains and their responses to rising temperature. Using electrical resistivity tomography, ground-penetrating radar profiling, and thermal-conduction modeling, we show how the land cover distributions influence thawing of discontinuous permafrost at a study site in the Northwest Territories, Canada. Permafrost bodies in this region occur under forested peat plateaus and have thicknesses of 5-13 m. Our geophysical data reveal different stages of thaw resulting from disturbances within the active layer: from widening and deepening of differential thaw features under small frost-table depressions to complete thaw of permafrost under an isolated bog. By using two-dimensional geometric constraints derived from our geophysics profiles and meteorological data, we model seasonal and interannual changes to permafrost distribution in response to contemporary climatic conditions and changes in land cover. Modeling results show that in this environment (1) differences in land cover have a strong influence on subsurface thermal gradients such that lateral thaw dominates over vertical thaw and (2) in accordance with field observations, thaw-induced subsidence and flooding at the lateral margins of peat plateaus represents a positive feedback that leads to enhanced warming along the margins of peat plateaus and subsequent lateral heat conduction. Based on our analysis, we suggest that subsurface energy transfer processes (and feedbacks) at scales of 1-100 m have a strong influence on overall permafrost degradation rates at much larger scales.

Chemical and Isotopic Characterization of Surface Water and Active Layer Pore Water in a Tundra Landscape, Barrow, Alaska, USA

NASA Astrophysics Data System (ADS)

Newman, B. D.; Heikoop, J. M.; Throckmorton, H.; Arendt, C. A.; Graham, D. E.; Wilson, C. J.; Wullschleger, S. D.

2016-12-01

Studies conducted in the Barrow Environmental Observatory as part of the Next Generation Ecosystem Experiment (NGEE) - Arctic have demonstrated significant chemical and isotopic variability in surface water and active layer pore water of polygonal terrain located between drained thaw lake basins (DTLBs). In this study, we report on chemical and isotopic variation at the broader landscape scale that includes different age DTLBs and associated drainages, extant thaw lakes, and interlake regions. Fingerprint diagrams of major elements show a broader range of variation at the landscape scale relative to polygonal terrain. ANOVA analysis suggests that many of the polygonal and broader landscape scale sites have similar chemistry, suggesting a reasonably high degree of hydrologic connectivity. The most significant site-specific differences include higher d18O and d2H, indicative of evaporative conditions, of surface and active layer water from an ancient (2000- 5500 BP) DTLB that comprises a shallow basin with no outlets. Significantly higher Cl, Ca, Fe, Mg, Na, As, Mn and Sr concentrations were also found in pore waters collected immediately above the frost table at two locations. The first location is a small drainage leading from an area of polygonal terrain into an adjacent slough, while the second is upgradient of the estuarine terminus of a drainage sourced from a medium-aged DTLB (50- 300 BP). Higher concentrations at the frost table suggests a mechanism related to periodic freezing and thawing of the transition zone above permafrost or permafrost degradation. Alternative conceptual models, including the presence of a marine signal or the influence of cryopegs (brine layers within permafrost), will also be considered. Characterization of present day Arctic hydrology and chemistry at different scales is important for Earth Systems Models and for predicting hydrogeochemical change associated with landscape evolution due to future permafrost degradation.

Assessing hazard risk, cost of adaptation and traditional land use activities in the context of permafrost thaw in communities in Yukon and the Northwest Territories, Canada

NASA Astrophysics Data System (ADS)

Benkert, B.; Perrin, A.; Calmels, F.

2015-12-01

Together with its partners, the Northern Climate ExChange (NCE, part of the Yukon Research Centre at Yukon College) has been mapping permafrost-related hazard risk in northern communities since 2010. By integrating geoscience and climate project data, we have developed a series of community-scale hazard risk maps. The maps depict hazard risk in stoplight colours for easy interpretation, and support community-based, future-focused adaptation planning. Communities, First Nations, consultants and local regulatory agencies have used the hazard risk maps to site small-scale infrastructure projects, guide land planning processes, and assess suitability of land development applications. However, we know that assessing risk is only one step in integrating the implications of permafrost degradation in societal responses to environmental change. To build on our permafrost hazard risk maps, we are integrating economic principles and traditional land use elements. To assess economic implications of adaptation to permafrost change, we are working with geotechnical engineers to identify adaptation options (e.g., modified building techniques, permafrost thaw mitigation approaches) that suit the risks captured by our existing hazard risk maps. We layer this with an economic analysis of the costs associated with identified adaptation options, providing end-users with a more comprehensive basis upon which to make decisions related to infrastructure. NCE researchers have also integrated traditional land use activities in assessments of permafrost thaw risk, in a project led by Jean Marie River First Nation in the Northwest Territories. Here, the implications of permafrost degradation on food security and land use priorities were assessed by layering key game and gathering areas on permafrost thaw vulnerability maps. Results indicated that close to one quarter of big and small game habitats, and close to twenty percent of key furbearer and gathering areas within the First Nation's traditional territory, are situated on highly thaw sensitive permafrost. These projects demonstrate how physical and socio-economic factors can be integrated in assessments of permafrost vulnerability to thaw, thus providing tangible, useable results that reflect community priorities and support local decision making.

Improved moving window cross-spectral analysis for resolving large temporal seismic velocity changes in permafrost

DOE PAGES

James, S. R.; Knox, H. A.; Abbott, R. E.; ...

2017-04-13

Cross correlations of seismic noise can potentially record large changes in subsurface velocity due to permafrost dynamics and be valuable for long-term Arctic monitoring. We applied seismic interferometry, using moving window cross-spectral analysis (MWCS), to 2 years of ambient noise data recorded in central Alaska to investigate whether seismic noise could be used to quantify relative velocity changes due to seasonal active-layer dynamics. The large velocity changes (>75%) between frozen and thawed soil caused prevalent cycle-skipping which made the method unusable in this setting. We developed an improved MWCS procedure which uses a moving reference to measure daily velocity variationsmore » that are then accumulated to recover the full seasonal change. This approach reduced cycle-skipping and recovered a seasonal trend that corresponded well with the timing of active-layer freeze and thaw. Lastly, this improvement opens the possibility of measuring large velocity changes by using MWCS and permafrost monitoring by using ambient noise.« less

Increased nitrous oxide emissions from Arctic peatlands after permafrost thaw

PubMed Central

Marushchak, Maija E.; Lamprecht, Richard E.; Jackowicz-Korczyński, Marcin; Lindgren, Amelie; Mastepanov, Mikhail; Granlund, Lars; Christensen, Torben R.; Tahvanainen, Teemu; Martikainen, Pertti J.; Biasi, Christina

2017-01-01

Permafrost in the Arctic is thawing, exposing large carbon and nitrogen stocks for decomposition. Gaseous carbon release from Arctic soils due to permafrost thawing is known to be substantial, but growing evidence suggests that Arctic soils may also be relevant sources of nitrous oxide (N2O). Here we show that N2O emissions from subarctic peatlands increase as the permafrost thaws. In our study, the highest postthaw emissions occurred from bare peat surfaces, a typical landform in permafrost peatlands, where permafrost thaw caused a fivefold increase in emissions (0.56 ± 0.11 vs. 2.81 ± 0.6 mg N2O m−2 d−1). These emission rates match those from tropical forest soils, the world’s largest natural terrestrial N2O source. The presence of vegetation, known to limit N2O emissions in tundra, did decrease (by ∼90%) but did not prevent thaw-induced N2O release, whereas waterlogged conditions suppressed the emissions. We show that regions with high probability for N2O emissions cover one-fourth of the Arctic. Our results imply that the Arctic N2O budget will depend strongly on moisture changes, and that a gradual deepening of the active layer will create a strong noncarbon climate change feedback. PMID:28559346

Linking tree demography to climate change feedbacks: fire, larch forests, and carbon pools of the Siberian Arctic

NASA Astrophysics Data System (ADS)

Alexander, H. D.; Loranty, M. M.; Natali, S.; Pena, H., III; Ludwig, S.; Spektor, V.; Davydov, S. P.; Zimov, N.; Mack, M. C.

2017-12-01

Fire severity is increasing in larch forests of the Siberian Arctic as climate warms, and initial fire impacts on tree demographic processes could be an especially important determinant of long-term forest structure and carbon (C) dynamics. We hypothesized that (1) larch forest regrowth post-fire is largely determined by residual soil organic layer (SOL) depth because of the SOL's role as a seedbed and thermal regulator, and (2) changes in post-fire larch recruitment impact C accumulation through stand density impacts on understory microclimate and permafrost thaw. We tested these hypotheses by (1) experimentally creating a soil burn severity gradient in a Cajander larch (Larix cajanderi Mayr.) forest near Cherskiy, Russia and (2) quantifying C pools across a stand density gradient within a 75-year old fire scar. From 2012-2015, we added larch seeds to plots burned at different severities and monitored recruitment along with permafrost and active layer (i.e., subject to annual freeze-thaw) conditions (SOL depth, temperature, moisture, and thaw depth). Across the density gradient, we inventoried larch trees and harvested ground-layer vegetation to estimate aboveground contribution to C pools. We quantified woody debris C pools and sampled belowground C pools (soil, fine roots, and coarse roots) in the organic + upper (0-10 cm) mineral soil. Larch recruits were rare in unburned and low severity plots, but a total of 6 new germinants m-2 were tallied in moderate and high severity plots during the study. Seedling survival for > 1 year was only 40 and 25% on moderate and high severity treatments, respectively, but yielded net larch recruitment of 2 seedlings m-2, compared to 0.3 seedlings m-2 on low severity plots. Density of both total and established recruits increased with decreasing residual SOL depth, which correlated with increased soil temperature, moisture, and thaw depth. At 75-year post-fire, total C pools increased with increased larch density, largely due to increased tree aboveground C pools and decreased ground-layer vegetation C pools, which corresponded to higher canopy cover, cooler soils, and shallower active layer depths. Our findings highlight the potential for a climate-driven increase in fire severity to alter tree recruitment, successional dynamics, and C cycling in Siberian larch forests.

Non-Psychrophilic Methanogens Capable of Growth Following Long-Term Extreme Temperature Changes, with Application to Mars.

PubMed

Mickol, Rebecca L; Laird, Sarah K; Kral, Timothy A

2018-04-23

Although the martian environment is currently cold and dry, geomorphological features on the surface of the planet indicate relatively recent (<4 My) freeze/thaw episodes. Additionally, the recent detections of near-subsurface ice as well as hydrated salts within recurring slope lineae suggest potentially habitable micro-environments within the martian subsurface. On Earth, microbial communities are often active at sub-freezing temperatures within permafrost, especially within the active layer, which experiences large ranges in temperature. With warming global temperatures, the effect of thawing permafrost communities on the release of greenhouse gases such as carbon dioxide and methane becomes increasingly important. Studies examining the community structure and activity of microbial permafrost communities on Earth can also be related to martian permafrost environments, should life have developed on the planet. Here, two non-psychrophilic methanogens, Methanobacterium formicicum and Methanothermobacter wolfeii , were tested for their ability to survive long-term (~4 year) exposure to freeze/thaw cycles varying in both temperature and duration, with implications both for climate change on Earth and possible life on Mars.

Mechanistic modeling of microbial interactions at pore to profile scale resolve methane emission dynamics from permafrost soil

NASA Astrophysics Data System (ADS)

Ebrahimi, Ali; Or, Dani

2017-05-01

The sensitivity of polar regions to raising global temperatures is reflected in rapidly changing hydrological processes associated with pronounced seasonal thawing of permafrost soil and increased biological activity. Of particular concern is the potential release of large amounts of soil carbon and stimulation of other soil-borne greenhouse gas emissions such as methane. Soil methanotrophic and methanogenic microbial communities rapidly adjust their activity and spatial organization in response to permafrost thawing and other environmental factors. Soil structural elements such as aggregates and layering affect oxygen and nutrient diffusion processes thereby contributing to methanogenic activity within temporal anoxic niches (hot spots). We developed a mechanistic individual-based model to quantify microbial activity dynamics in soil pore networks considering transport processes and enzymatic activity associated with methane production in soil. The model was upscaled from single aggregates to the soil profile where freezing/thawing provides macroscopic boundary conditions for microbial activity at different soil depths. The model distinguishes microbial activity in aerate bulk soil from aggregates (or submerged profile) for resolving methane production and oxidation rates. Methane transport pathways by diffusion and ebullition of bubbles vary with hydration dynamics. The model links seasonal thermal and hydrologic dynamics with evolution of microbial community composition and function affecting net methane emissions in good agreement with experimental data. The mechanistic model enables systematic evaluation of key controlling factors in thawing permafrost and microbial response (e.g., nutrient availability and enzyme activity) on long-term methane emissions and carbon decomposition rates in the rapidly changing polar regions.

Fine-scale Patterns in Thaw Depth, Micro-relief, and Ground Cover on Non-sorted Circles and Small Patterned Ground Features Along a Climatic Gradient From Low to High Arctic

NASA Astrophysics Data System (ADS)

Okie, J.; Gould, W. A.; González, G.

2006-12-01

Patterned ground is a ubiquitous feature in the Arctic and the related variation in microtopographic relief strongly affects biotic and abiotic patterns and processes. Patterned ground features are polygenic in origin and are often found superimposed in a complex pattern of multiple features. We investigated the relationship between thaw depth, micro-relief, the cover of vascular, bryophyte, cryptogamic crust and bare ground along transects traversing non-sorted circles and small non-sorted polygons at 8 research sites along a climatic gradient in bioclimatic subzones A-E in the North American Arctic. Non-sorted circles are the result of differential frost heave with circle centers typically showing greater heave during freezing than inter circle areas. Differential heave is a function of climate, soil texture, soil moisture, and vegetation cover. Differential heave and subsidence creates fine-scale gradients in microtopography that affect soil moisture, exposure to winds, and development of vegetation and soils. Non-sorted circles typically range from 20 to 200 cm in diameter and are most common in subzones C-E. Often superimposed on these features are the development of small non-sorted polygons 10-30 cm in diameter, and fine-scale desiccation cracking at a scale of less than 10 cm. These are most common in subzones A-C. We established three 20 m transects in zonal vegetation at each site. Thaw depth, micro-relief, and ground cover were measured at 10 cm intervals along each transect. Additionally, we measured vascular plant beta diversity in a set of 25 x 25 cm quadrates on 15 circles and 15 inter circles at each site. The resulting pattern of thaw depth and micro-relief is correlated with both summer temperatures and vegetation cover. The variability and degree of micro-relief decrease from the Low to the High Arctic. Non-sorted circle centers had deeper active layer than inter circle areas along the gradient. Thaw depths increase linearly with the degree of bare ground and nonlinearly with summer warmth. This unimodal pattern of shallower active layer at the warmest and coldest sites is due to the interaction of climate and the insulating vegetation layer. Greatest thaw depths are found on bare non-sorted circles in subzone C. Beta diversity is greatest in subzone D, where vegetated inter circle areas differ markedly from more barren non- sorted circles.

The effect of two pre-cryopreservation single layer colloidal centrifugation protocols in combination with different freezing extenders on the fragmentation dynamics of thawed equine sperm DNA

PubMed Central

2012-01-01

Background Variability among stallions in terms of semen cryopreservation quality renders it difficult to arrive at a standardized cryopreservation method. Different extenders and processing techniques (such us colloidal centrifugation) are used in order to optimize post-thaw sperm quality. Sperm chromatin integrity analysis is an effective tool for assessing such quality. The aim of the present study was to compare the effect of two single layer colloidal centrifugation protocols (prior to cryopreservation) in combination with three commercial freezing extenders on the post-thaw chromatin integrity of equine sperm samples at different post-thaw incubation (37°C) times (i.e., their DNA fragmentation dynamics). Results Post-thaw DNA fragmentation levels in semen samples subjected to either of the colloidal centrifugation protocols were significantly lower (p<0.05) immediately after thawing and after 4 h of incubation at 37°C compared to samples that underwent standard (control) centrifugation. The use of InraFreeze® extender was associated with significantly less DNA fragmentation than the use of Botu-Crio® extender at 6 h of incubation, and than the use of either Botu-Crio® or Gent® extender at 24 h of incubation (p<0.05). Conclusions These results suggest that single layer colloidal centrifugation performed with extended or raw semen prior to cryopreservation reduces DNA fragmentation during the first four hours after thawing. Further studies are needed to determine the influence of freezing extenders on equine sperm DNA fragmentation dynamics. PMID:23217215

Analysis of Terrestrial Carbon Stocks in a Small Catchment of Northeastern Siberia

NASA Astrophysics Data System (ADS)

Heard, K.; Natali, S.; Bunn, A. G.; Loranty, M. M.; Kholodov, A. L.; Schade, J. D.; Berner, L. T.; Spektor, V.; Zimov, N.; Alexander, H. D.

2015-12-01

As arctic terrestrial ecosystems comprise about one-third of the global terrestrial ecosystem carbon total, understanding arctic carbon cycling and the feedback of terrestrial carbon pools to accelerated warming is an issue of global concern. For this research, we examined above- and belowground carbon stocks in a larch-dominated catchment underlain by yedoma and located within the Kolyma River watershed in northeastern Siberia. We quantified carbon stocks in vegetation, active layer, and permafrost, and we assessed the correlation between plant and active layer carbon pools and four environmental correlates — slope, solar insolation, canopy density, and leaf area index ­— at 20 sites. Carbon in the active layer was approximately four times greater than aboveground carbon pools (972 g C m-2), and belowground carbon to 1 m depth was approximately 18 times greater than aboveground carbon pools. Canopy density and slope had a robust positive association with aboveground carbon pools, and soil moisture was positively related to %C in organic, thawed mineral and permafrost soil. Thaw depth was negatively correlated with moss cover and larch biomass, highlighting the importance of vegetation and surface characteristics on permafrost carbon vulnerability. These data suggest that landscape and ecosystem characteristics affect carbon accumulation and storage, but they also play an important role in stabilizing permafrost carbon pools.

Remote sensing of freeze-thaw transitions in Arctic soils using the complex resistivity method

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wu, Yuxin; Hubbard, Susan S; Ulrich, Craig

2013-01-01

Our ability to monitor freeze - thaw transitions is critical to developing a predictive understanding of biogeochemical transitions and carbon dynamics in high latitude environments. In this study, we conducted laboratory column experiments to explore the potential of the complex resistivity method for monitoring the freeze - thaw transitions of the arctic permafrost soils. Samples for the experiment were collected from the upper active layer of Gelisol soils at the Barrow Environmental Observatory, Barrow Alaska. Freeze - thaw transitions were induced through exposing the soil column to controlled temperature environments at 4 C and -20 C. Complex resistivity and temperaturemore » measurements were collected regularly during the freeze - thaw transitions using electrodes and temperature sensors installed along the column. During the experiments, over two orders of magnitude of resistivity variations were observed when the temperature was increased or decreased between -20 C and 0 C. Smaller resistivity variations were also observed during the isothermal thawing or freezing processes that occurred near 0 C. Single frequency electrical phase response and imaginary conductivity at 1 Hz were found to be exclusively related to the unfrozen water in the soil matrix, suggesting that these geophysical 24 attributes can be used as a proxy for the monitoring of the onset and progression of the freeze - thaw transitions. Spectral electrical responses and fitted Cole Cole parameters contained additional information about the freeze - thaw transition affected by the soil grain size distribution. Specifically, a shift of the observed spectral response to lower frequency was observed during isothermal thawing process, which we interpret to be due to sequential thawing, first from fine then to coarse particles within the soil matrix. Our study demonstrates the potential of the complex resistivity method for remote monitoring of freeze - thaw transitions in arctic soils. Although conducted at the laboratory scale, this study provides the foundation for exploring the potential of the complex resistivity signals for monitoring spatiotemporal variations of freeze - thaw transitions over field-relevant scales.« less

Soil Carbon Distribution along a Hill Slope in the Siberian Arctic

NASA Astrophysics Data System (ADS)

Ludwig, S.; Bunn, A. G.; Schade, J. D.

2011-12-01

Arctic ecosystems are warming at an accelerated rate relative to lower latitudes, and this warming has significant global significance. In particular, the thawing of permafrost soils has the potential to strongly influence global carbon cycling and the functioning of terrestrial and aquatic ecosystems. Our overarching scientific goal is to study the impact of thawing permafrost on the transport and processing of carbon and other nutrients as they move with water from terrestrial ecosystems to the Arctic Ocean. Transport of materials from soil to headwater aquatic ecosystems is the first step in this movement. Processes occurring along hill slopes strongly influence the form and concentration of material available for transport. These processes include downhill accumulation of materials due to groundwater movement, or alternatively, local effects of changes in soil and vegetation characteristics. In this project, we studied a hill slope adjacent to a small first order stream in the Kolyma River in Eastern Siberia. We sampled soil at several points along three transects from the top of the hill to the riparian zone by coring and homogenizing the entire active layer at each point. We measured soil organic matter content, soil moisture, water extractable dissolved organic carbon (DOC), total dissolved nitrogen (TDN), NH4, NO3, soluble reactive phosphorus (SRP), and CDOM absorbance. We also measured soil respiration using a laboratory-based biological oxygen demand protocol conducted on soil-water slurries. Active layer depth decreased down the hillslope, while soil moisture, organic matter, and DOC all increased down the hillslope. CDOM absorbance increased downhill, which indicates a decrease in molecular weight of organic compounds at the bottom of the hill. This suggests either an input of newer carbon or processing of high molecular weight DOM down the slope. Soil respiration also increased downhill and was likely driven in part by increased OM in the shallower active layer. Finally, several soil variables were tightly correlated with active layer depth, suggesting that these patterns are driven by changes in the rate of thaw of the active layer driving local soil processes. Clearly, our results suggest significant changes in the form and amount of carbon available for processing and transport along hillslope transects, which may strongly influence the role of terrestrial-aquatic linkage in transport and processing of carbon and other nutrients.

Pleistocene ice-rich yedoma in Interior Alaska

NASA Astrophysics Data System (ADS)

Kanevskiy, M. Z.; Shur, Y.; Jorgenson, T. T.; Sturm, M.; Bjella, K.; Bray, M.; Harden, J. W.; Dillon, M.; Fortier, D.; O'Donnell, J.

2011-12-01

Yedoma, or the ice-rich syngenetic permafrost with large ice wedges, widely occurs in parts of Alaska that were unglaciated during the last glaciation including Interior Alaska, Foothills of Brooks Range and Seward Peninsula. A thick layer of syngenetic permafrost was formed by simultaneous accumulation of silt and upward permafrost aggradation. Until recently, yedoma has been studied mainly in Russia. In Interior Alaska, we have studied yedoma at several field sites (Erickson Creek area, Boot Lake area, and several sites around Fairbanks, including well-known CRREL Permafrost tunnel). All these locations are characterized by thick sequences of ice-rich silt with large ice wedges up to 30 m deep. Our study in the CRREL Permafrost tunnel and surrounding area revealed a yedoma section up to 18 m thick, whose formation began about 40,000 yr BP. The volume of wedge-ice (about 10-15%) is not very big in comparison with other yedoma sites (typically more than 30%), but soils between ice wedges are extremely ice-rich - an average value of gravimetric moisture content of undisturbed yedoma silt with micro-cryostructures is about 130%. Numerous bodies of thermokarst-cave ice were detected in the tunnel. Geotechnical investigations along the Dalton Highway near Livengood (Erickson Creek area) provided opportunities for studies of yedoma cores from deep boreholes. The radiocarbon age of sediments varies from 20,000 to 45,000 yr BP. Most of soils in the area are extremely ice-rich. Thickness of ice-rich silt varies from 10 m to more than 26 m, and volume of wedge-ice reaches 35-45%. Soil between ice wedges has mainly micro-cryostructures and average gravimetric moisture content from 80% to 100%. Our studies have shown that the top part of yedoma in many locations was affected by deep thawing during the Holocene, which resulted in formation of the layer of thawed and refrozen soils up to 6 m thick on top of yedoma deposits. Thawing of the upper permafrost could be related to climate changes during Holocene or to wildfires, or both. The ice-poor layer of thawed and refrozen sediments (gravimetric moisture content usually does not exceed 40%) was encountered in many boreholes below the thin ice-rich intermediate layer (gravimetric moisture content usually exceeds 100%). These two layers separate ice wedges from the active layer and protect them from further thawing. Such structure of the upper permafrost at different yedoma sites of Interior Alaska can explain a relatively rare occurrence of surface features related to yedoma degradation such as thermokarst mounds and erosional gullies developed along ice wedges.

Identifying Hydrologic Flowpaths on Arctic Hillslopes Using Electrical Resistivity and Self Potential

NASA Astrophysics Data System (ADS)

Voytek, E.; Rushlow, C. R.; Godsey, S.; Singha, K.

2015-12-01

Shallow subsurface flow is a dominant process controlling hillslope runoff generation, soil development, and solute reaction and transport. Despite their importance, the location and geometry of flowpaths are difficult to determine. In arctic environments, shallow subsurface flowpaths are limited to a thin zone of seasonal thaw above continuous permafrost, which is traditionally assumed to mimic to surface topography. Here we use a combined approach of electrical resistivity imaging (ERI) and self-potential measurements (SP) to map shallow subsurface flowpaths in and around water tracks, drainage features common to arctic hillslopes. ERI measurements delineate thawed zones in the subsurface that control flowpaths, while SP is sensitive to groundwater flow. We find that areas of low electrical resistivity in the water tracks are deeper than manual thaw depth estimates and variations from surface topography. This finding suggests that traditional techniques significantly underestimate active layer thaw and the extent of the flowpath network on arctic hillslopes. SP measurements identify complex 3-D flowpaths in the thawed zone. Our results lay the groundwork for investigations into the seasonal dynamics, hydrologic connectivity, and climate sensitivity of spatially distributed flowpath networks on arctic hillslopes.

Spatial and temporal variations of thaw layer thickness and its controlling factors identified using time-lapse electrical resistivity tomography and hydro-thermal modeling

NASA Astrophysics Data System (ADS)

Tran, Anh Phuong; Dafflon, Baptiste; Bisht, Gautam; Hubbard, Susan S.

2018-06-01

Quantitative understanding of controls on thaw layer thickness (TLT) dynamics in the Arctic peninsula is essential for predictive understanding of permafrost degradation feedbacks to global warming and hydrobiochemical processes. This study jointly interprets electrical resistivity tomography (ERT) measurements and hydro-thermal numerical simulation results to assess spatiotemporal variations of TLT and to determine its controlling factors in Barrow, Alaska. Time-lapse ERT measurements along a 35-m transect were autonomously collected from 2013 to 2015 and inverted to obtain soil electrical resistivity. Based on several probe-based TLT measurements and co-located soil electrical resistivity, we estimated the electrical resistivity thresholds associated with the boundary between the thaw layer and permafrost using a grid search optimization algorithm. Then, we used the obtained thresholds to derive the TLT from all soil electrical resistivity images. The spatiotemporal analysis of the ERT-derived TLT shows that the TLT at high-centered polygons (HCPs) is smaller than that at low-centered polygons (LCPs), and that both thawing and freezing occur earlier at the HCPs compared to the LCPs. In order to provide a physical explanation for dynamics in the thaw layer, we performed 1-D hydro-thermal simulations using the community land model (CLM). Simulation results showed that air temperature and precipitation jointly govern the temporal variations of TLT, while the topsoil organic content (SOC) and polygon morphology are responsible for its spatial variations. When the topsoil SOC and its thickness increase, TLT decreases. Meanwhile, at LCPs, a thicker snow layer and saturated soil contribute to a thicker TLT and extend the time needed for TLT to freeze and thaw. This research highlights the importance of combination of measurements and numerical modeling to improve our understanding spatiotemporal variations and key controls of TLT in cold regions.

Effect of wildfire and fireline construction on the annual depth of thaw in a black spruce permafrost forest in interior Alaska: a 36-year record of recovery

Treesearch

Leslie A. Viereck; Nancy R. Werdin-Pfisterer; Phyllis C. Adams; Kenji Yoshikawa

2008-01-01

Maximum thaw depths were measured annually in an unburned stand, a heavily burned stand, and a fireline in and adjacent to the 1971 Wickersham fire. Maximum thaw in the unburned black spruce stand ranged from 36 to 52 cm. In the burned stand, thaw increased each year to a maximum depth of 302 cm in 1995. In 1996, the entire layer of seasonal frost remained, creating a...

Monodisperse, polymeric microspheres produced by irradiation of slowly thawing frozen drops

NASA Technical Reports Server (NTRS)

Rhim, Won-Kyu (Inventor); Hyson, Michael T. (Inventor); Chung, Sang-Kun (Inventor); Colvin, Michael S. (Inventor); Chang, Manchium (Inventor)

1991-01-01

Monodisperse, polymeric microspheres are formed by injecting uniformly shaped droplets of radiation polymerizable monomers, preferably a biocompatible monomer, having covalent binding sites such as hydroxyethylmethacrylate, into a zone, impressing a like charge on the droplet so that they mutually repel each other, spheroidizing the droplets within the zone and collecting the droplets in a pool of cryogenic liquid. As the droplets enter the liquid, they freeze into solid, glassy microspheres, which vaporizes a portion of the cryogenic liquid to form a layer. The like-charged microspheres, suspended within the layer, move to the edge of the vessel holding the pool, are discharged, fall and are collected. The collected microspheres are irradiated while frozen in the cryogenic liquid to form latent free radicals. The frozen microspheres are then slowly thawed to activate the free radicals which polymerize the monomer to form evenly-sized, evenly-shaped, monodisperse polymeric microspheres.

Near-Surface Profiles of Water Stable Isotope Components and Indicated Transitional History of Ice-Wedge Polygons Near Barrow

NASA Astrophysics Data System (ADS)

Iwahana, G.; Wilson, C.; Newman, B. D.; Heikoop, J. M.; Busey, R.

2017-12-01

Wetlands associated with ice-wedge polygons are commonly distributed across the Arctic Coastal Plain of northern Alaska, a region underlain by continuous permafrost. Micro-topography of the ice-wedge polygons controls local hydrology, and the micro-topography could be altered due to factors such like surface vegetation, wetness, freeze-thaw cycles, and permafrost degradation/aggradation under climate change. Understanding status of the wetlands in the near future is important because it determines biogeochemical cycle, which drives release of greenhouse gases from the ground. However, transitional regime of the ice-wedge polygons under the changing climate is not fully understood. In this study, we analyzed geochemistry of water extracted from frozen soil cores sampled down to about 1m depth in 2014 March at NGEE-Arctic sites in the Barrow Environmental Observatory. The cores were sampled from troughs/rims/centers of five different low-centered or flat-centered polygons. The frozen cores are divided into 5-10cm cores for each location, thawed in sealed plastic bags, and then extracted water was stored in vials. Comparison between the profiles of geochemistry indicated connection of soil water in the active layer at different location in a polygon, while it revealed that distinctly different water has been stored in permafrost layer at troughs/rims/centers of some polygons. Profiles of volumetric water content (VWC) showed clear signals of freeze-up desiccation in the middle of saturated active layers as low VWC anomalies at most sampling points. Water in the active layer and near-surface permafrost was classified into four categories: ice wedge / fresh meteoric / transitional / highly fractionated water. The overall results suggested prolonged separation of water in the active layer at the center of low-centered polygons without lateral connection in water path in the past.

Past permafrost on the Mid-Atlantic coastal plain, eastern United States

USGS Publications Warehouse

French, H.; Demitroff, M.; Newell, Wayne L.

2009-01-01

Sand-wedge casts, soil wedges and other non-diastrophic, post-depositional sedimentary structures suggest that Late-Pleistocene permafrost and deep seasonal frost on the Mid-Atlantic Coastal Plain extended at least as far south as southern Delaware, the Eastern Shore and southern Maryland. Heterogeneous cold-climate slope deposits mantle lower valley-side slopes in central Maryland. A widespread pre-existing fragipan is congruent with the inferred palaeo-permafrost table. The high bulk density of the fragipan was probably enhanced by either thaw consolidation when icy permafrost degraded at the active layer-permafrost interface or by liquefaction and compaction when deep seasonal frost thawed. ?? 2009 John Wiley & Sons, Ltd.

Quantifying shallow and deep permafrost changes using radar remote sensing

NASA Astrophysics Data System (ADS)

Teshebaeva, K.; van Huissteden, K. J.

2017-12-01

Widespread thawing of permafrost in the northern Eurasian continent cause severe problems for infrastructure and global climate. Permafrost thaw by climate warming creates land surface instability, resulting in severe problems for infrastructure, and release of organic matter to the atmosphere as CO2 and CH4. Recent discoveries of CH4 seeps in lakes, in the Arctic Ocean, and CH4 emitting craters in the permafrost. These features indicate that permafrost destabilization might no longer be a surface feature only, but that also deeper layers of the permafrost, up to tens of meters, may be affected by warming. We study two potential areas in Siberian arctic; one of the test site is the Kytalyk research station near Chokurdagh town affected with a recent inundation of the Indigirka river in July 2017, which resulted in standing surface water for the period over a month. The wet soil and standing water may cause changes in active layer thickness and influence the thermal regime of the permafrost for the next decades in the region. The second test site is Yamal peninsula with recently CH4 emitting craters, which may start to contribute to emission hotspots. We hypothesize that these deeper subsurface processes also can be detected by mapping surface elevation changes using advanced SAR techniques. We test the potential of SAR imagery to enhance detection of these features, including surface movement related to permafrost active layer changes using InSAR time-series analysis. We also apply radar backscatter signal to detect seasonal changes related to the freeze-thaw cycles. The PRISM elevation data are used to estimate elevation changes in the region along with ground-based geophysical and geodetical fieldwork.

Experimentally increased nutrient availability at the permafrost thaw front selectively enhances biomass production of deep-rooting subarctic peatland species.

PubMed

Keuper, Frida; Dorrepaal, Ellen; van Bodegom, Peter M; van Logtestijn, Richard; Venhuizen, Gemma; van Hal, Jurgen; Aerts, Rien

2017-10-01

Climate warming increases nitrogen (N) mineralization in superficial soil layers (the dominant rooting zone) of subarctic peatlands. Thawing and subsequent mineralization of permafrost increases plant-available N around the thaw-front. Because plant production in these peatlands is N-limited, such changes may substantially affect net primary production and species composition. We aimed to identify the potential impact of increased N-availability due to permafrost thawing on subarctic peatland plant production and species performance, relative to the impact of increased N-availability in superficial organic layers. Therefore, we investigated whether plant roots are present at the thaw-front (45 cm depth) and whether N-uptake ( 15 N-tracer) at the thaw-front occurs during maximum thaw-depth, coinciding with the end of the growing season. Moreover, we performed a unique 3-year belowground fertilization experiment with fully factorial combinations of deep- (thaw-front) and shallow-fertilization (10 cm depth) and controls. We found that certain species are present with roots at the thaw-front (Rubus chamaemorus) and have the capacity (R. chamaemorus, Eriophorum vaginatum) for N-uptake from the thaw-front between autumn and spring when aboveground tissue is largely senescent. In response to 3-year shallow-belowground fertilization (S) both shallow- (Empetrum hermaphroditum) and deep-rooting species increased aboveground biomass and N-content, but only deep-rooting species responded positively to enhanced nutrient supply at the thaw-front (D). Moreover, the effects of shallow-fertilization and thaw-front fertilization on aboveground biomass production of the deep-rooting species were similar in magnitude (S: 71%; D: 111% increase compared to control) and additive (S + D: 181% increase). Our results show that plant-available N released from thawing permafrost can form a thus far overlooked additional N-source for deep-rooting subarctic plant species and increase their biomass production beyond the already established impact of warming-driven enhanced shallow N-mineralization. This may result in shifts in plant community composition and may partially counteract the increased carbon losses from thawing permafrost. © 2017 John Wiley & Sons Ltd.

Thermokarst and thaw-related landscape dynamics -- an annotated bibliography with an emphasis on potential effects on habitat and wildlife

USGS Publications Warehouse

Jones, Benjamin M.; Amundson, Courtney L.; Koch, Joshua C.; Grosse, Guido

2013-01-01

Permafrost has warmed throughout much of the Northern Hemisphere since the 1980s, with colder permafrost sites warming more rapidly (Romanovsky and others, 2010; Smith and others, 2010). Warming of the near-surface permafrost may lead to widespread terrain instability in ice-rich permafrost in the Arctic and the Subarctic, and may result in thermokarst development and other thaw-related landscape features (Jorgenson and others, 2006; Gooseff and others, 2009). Thermokarst and other thaw-related landscape features result from varying modes and scales of permafrost thaw, subsidence, and removal of material. An increase in active-layer depth, water accumulation on the soil surface, permafrost degradation and associated retreat of the permafrost table, and changes to lake shores and coastal bluffs act and interact to create thermokarst and other thaw-related landscape features (Shur and Osterkamp, 2007). There is increasing interest in the spatial and temporal dynamics of thermokarst and other thaw-related features from diverse disciplines including landscape ecology, hydrology, engineering, and biogeochemistry. Therefore, there is a need to synthesize and disseminate knowledge on the current state of near-surface permafrost terrain. The term "thermokarst" originated in the Russian literature, and its scientific use has varied substantially over time (Shur and Osterkamp, 2007). The modern definition of thermokarst refers to the process by which characteristic landforms result from the thawing of ice-rich permafrost or the melting of massive ice (van Everdingen, 1998), or, more specifically, the thawing of ice-rich permafrost and (or) melting of massive ice that result in consolidation and deformation of the soil surface and formation of specific forms of relief (Shur, 1988). Jorgenson (2013) identifies 23 distinct thermokarst and other thaw-related features in the Arctic, Subarctic, and Antarctic based primarily on differences in terrain condition, ground-ice volume, and heat and mass transfer processes. Typical Arctic thermokarst landforms include thermokarst lakes, collapsed pingos, sinkholes, and pits. Thermokarst is differentiated from thermal erosion, which refers to the erosion of the land surface by thermal and mechanical processes (Mackay, 1970; van Everdingen, 1998). Typical thermal erosional features include thermo-erosional gullies. Thermal abrasion is further differentiated from thermokarst and thermal erosion by association with the reworking of ocean, river, and lake bluffs (Are, 1988). Typical thermo-abrasion features include erosional niches at the base of bluffs. Thermal denudation is another distinct term that refers to the effect of incoming solar energy on the thaw of frozen slopes and permafrost bodies that subsequently become transported downhill by gravity (Shur and Osterkamp, 2007). Active layer detachment slides and thaw slumps are typical thermal denudation features. Shur and Osterkamp (2007) noted that these various transport processes may occur together with thermokarst or in instances that would not be considered thermokarst. This compilation of references regarding thermokarst and other thaw-related features is focused on the Arctic and the Subarctic. References were drawn from North America as well as Siberia. English-language literature mostly was targeted, with 167 references annotated in version 1.0; however, an additional 28 Russian-language references were taken from Shur and Osterkamp (2007) and are provided at the end of this document. This compilation may be missing key references and inevitably will become outdated soon after publication. We hope that this document, version 1.0, will serve as the foundation for a comprehensive compilation of thermokarst and permafrost-terrain stability references, and that it will be updated continually over the coming years.

Mechanism of the surface runoff generation processes of a permafrost watershed in the Qinghai-Tibet plateau

NASA Astrophysics Data System (ADS)

Genxu, W.

2017-12-01

There is a lack of knowledge about how to quantify runoff generation and the hydrological processes operating in permafrost catchments on permafrost-dominant catchments. To understand the mechanism of runoff generation processes in permafrost catchments, a typical headwater catchment with continuous permafrost on the Tibetan Plateau was measured. A new approach is presented in this study to account for runoff processes on the spring thawing period and autumn freezing period, when runoff generation clearly differs from that of non-permafrost catchments. This approach introduces a soil temperature-based water saturation function and modifies the soil water storage curve with a soil temperature threshold. The results show that surface soil thawing induced saturation excess runoff and subsurface interflow account for approximately 66-86% and 14-34% of total spring runoff, respectively, and the soil temperature significantly affects the runoff generation pattern, the runoff composition and the runoff coefficient with the enlargement of the active layer. The suprapermafrost groundwater discharge decreases exponentially with active layer frozen processes during autumn runoff recession, whereas the ratio of groundwater discharge to total runoff and the direct surface runoff coefficient simultaneously increase. The bidirectional freezing of the active layer controls and changes the autumn runoff processes and runoff composition. The new approach could be used to further develop hydrological models of cold regions dominated by permafrost.

Permafrost thaw in a nested groundwater-flow system

USGS Publications Warehouse

McKenzie, Jeffery M.; Voss, Clifford I.

2013-01-01

Groundwater flow in cold regions containing permafrost accelerates climate-warming-driven thaw and changes thaw patterns. Simulation analyses of groundwater flow and heat transport with freeze/thaw in typical cold-regions terrain with nested flow indicate that early thaw rate is particularly enhanced by flow, the time when adverse environmental impacts of climate-warming-induced permafrost loss may be severest. For the slowest climate-warming rate predicted by the Intergovernmental Panel on Climate Change (IPCC), once significant groundwater flow begins, thick permafrost layers can vanish in several hundred years, but survive over 1,000 years where flow is minimal. Large-scale thaw depends mostly on the balance of heat advection and conduction in the supra-permafrost zone. Surface-water bodies underlain by open taliks allow slow sub-permafrost flow, with lesser influence on regional thaw. Advection dominance over conduction depends on permeability and topography. Groundwater flow around permafrost and flow through permafrost impact thaw differently; the latter enhances early thaw rate. Air-temperature seasonality also increases early thaw. Hydrogeologic heterogeneity and topography strongly affect thaw rates/patterns. Permafrost controls the groundwater/surface-water-geomorphology system; hence, prediction and mitigation of impacts of thaw on ecology, chemical exports and infrastructure require improved hydrogeology/permafrost characterization and understanding

Mapping Microbial Carbon Substrate Utilization Across Permafrost Thaw

NASA Astrophysics Data System (ADS)

Anderson, D.; Rich, V. I.; Hodgkins, S. B.; Tfaily, M.; Chanton, J.

2014-12-01

Permafrost thaw is likely to create a substantial positive feedback to climate warming, as previously frozen carbon becomes bioavailable and is released to the atmosphere. Microbes mediate this release, while also consuming "new" carbon from plant inputs and middle-aged soil carbon pools in the seasonally-thawed active layer overlying permafrost. This carbon consumption releases carbon dioxide (CO2) and methane (CH4), both potent greenhouse gases. To investigate microbial carbon cycling in this changing habitat, we examined how microbial communities' carbon substrate degradation changes along a natural permafrost thaw gradient in Stordalen Mire (68.35°N, 19.05°E), northern Sweden. At this location, intermediate thaw creates Sphagnum moss-dominated bogs, while complete thaw results in Eriophorum sedge-dominated fens. The progression of thaw results in increasing organic matter lability (Hodgkins et al, 2014), shifting microbial community composition (Mondav & Woodcroft et al 2014), and changing carbon gas emissions (McCalley et al, in review). However, the inter-relationship of the first two in producing the third remains unclear. We analyzed microbial carbon substrate utilization in the intermediate-thaw and full-thaw sites by two incubation-based methods. We used Biolog EcoPlates, which contain 31 ecologically relevant carbon substrates and a colorimetric marker of their consumption, and into which we added a soil liquid suspension. In addition, we performed mason-jar incubations of peat with carbon substrate amendments and measured CH4 and CO2 emissions. Preliminary Biolog Ecoplate incubations showed that intermediate-thaw features responded faster and more strongly overall to a wide range of substrates relative to the full-thaw features. Preliminary mason jar incubations showed that acetate amendment elicited the greatest response increase in CH4 production and the second greatest increase in CO2 production relative to the controls, in samples from both habitats. In addition, the lowest CH4 and CO2 production was seen in amendments of sphagnum acid. It is important to understand the carbon substrate utilization occurring at these initial and advanced thaw features to speculate the degree to which various carbon inputs are being metabolized to produce the observed gas emissions.

Characterizing soil moisture and snow cover effects on boreal-arctic soil freeze/thaw dynamics and cold-season carbon emissions

NASA Astrophysics Data System (ADS)

Yi, Y.; Kimball, J. S.; Moghaddam, M.; Chen, R. H.; Reichle, R. H.; Oechel, W. C.; Zona, D.

2017-12-01

The contribution of cold season respiration to boreal-arctic carbon cycle and its potential feedbacks to climate change remain poorly quantified. Here, we developed an integrated modeling framework combining airborne low frequency (L+P-band) airborne radar retrievals and landscape level (≥1km) environmental observations from satellite optical and microwave sensors with a detailed permafrost carbon model to investigate underlying processes controlling soil freeze/thaw (FT) dynamics and cold season carbon emissions. The permafrost carbon model simulates the snow and soil thermal dynamics with soil water phase change included and accounts for soil carbon decomposition up to 3m below surface. Local-scale ( 50m) radar retrievals of active layer thickness (ALT), soil moisture and freeze/thaw (FT) status from NASA airborne UAVSAR and AirMOSS sensors are used to inform the model parameterizations of soil moisture effects on soil FT dynamics, and scaling properties of active layer processes. Both tower observed land-atmosphere fluxes and atmospheric CO2 measurements are used to evaluate the model processes controlling cold season carbon respiration, particularly the effects of snow cover and soil moisture on deep soil carbon emissions during the early cold season. Initial comparisons showed that the model can well capture the seasonality of cold season respiration in both tundra and boreal forest areas, with large emissions in late fall and early winter and gradually diminishing throughout the winter. Model sensitivity analyses are used to clarify how changes in soil thermodynamics at depth control the magnitude and seasonality of cold season respiration, and how a deeper unfrozen active layer with warming may contribute to changes in cold season respiration. Model outputs include ALT and regional carbon fluxes at 1-km resolution spanning recent satellite era (2001-present) across Alaska. These results will be used to quantify cold season respiration contributions to the annual carbon cycle and help close the boreal-arctic annual carbon budget.

Methane Ebullition During Simulated Lake Expansion and Permafrost Degradation

NASA Astrophysics Data System (ADS)

Mazéas, O.; von Fischer, J. C.; Whelan, M.; Rhew, R.

2007-12-01

Methane, a potent greenhouse gas, is emitted by Arctic tundra and lakes. Ebullition, or bubbling, of methane from Arctic lakes has been shown to be a major transport mechanism from the sediment to the atmosphere, and ebullition rates are greatest near the edges of the lakes where active erosion is occurring. In regions of continuous permafrost, Arctic lakes have been expanding in recent decades, attributed to permafrost melting and development of thermokarst. Lake expansion occurs when the margins erode into water, supplying large amounts of organic rich material to the sediment-water interface. This allows carbon that was previously stored in the soil (active layer and permafrost) to become bioavailable and subject to decomposition. An increase in Arctic methane emissions as a result of permafrost thawing and lake expansion would constitute a positive feedback to Arctic warming. In order to better understand these processes, an experiment was initiated in July 2007 at the Barrow Environmental Observatory, Barrow, AK. Different layers of locally collected tundra soil were placed into incubation chambers at the bottom of a shallow (about 1 m deep) lake. Each experimental chamber consists of a bucket fixed underneath an inverted funnel, with a sampling port on top to capture and collect the emitted gases. Gas samples are analyzed for methane and carbon dioxide concentrations, as well as relevant isotopic compositions. Gas sampling has occurred at frequent intervals during the late summer and will continue through the early winter. Three replicates of each layer (active layer, seasonally frozen active layer and permafrost) were incubated, as well as an empty control chamber. An additional chamber containing thawed permafrost and cellulose-rich sawdust was placed for comparison, as cellulose is a major component of plant tissue and the fermentation of the cellulose should yield substrates for methanogenesis. Total production of methane versus organic carbon content of initial sample, kinetics of ebullition, and relative potential emissions from each tundra layer will be assessed.

Bioavailable Carbon and the Relative Degradation State of Organic Matter in Active Layer and Permafrost Soils

NASA Astrophysics Data System (ADS)

Jastrow, J. D.; Burke, V. J.; Vugteveen, T. W.; Fan, Z.; Hofmann, S. M.; Lederhouse, J. S.; Matamala, R.; Michaelson, G. J.; Mishra, U.; Ping, C. L.

2015-12-01

The decomposability of soil organic carbon (SOC) in permafrost regions is a key uncertainty in efforts to predict carbon release from thawing permafrost and its impacts. The cold and often wet environment is the dominant factor limiting decomposer activity, and soil organic matter is often preserved in a relatively undecomposed and uncomplexed state. Thus, the impacts of soil warming and permafrost thaw are likely to depend at least initially on the genesis and past history of organic matter degradation before its stabilization in permafrost. We compared the bioavailability and relative degradation state of SOC in active layer and permafrost soils from Arctic tundra in Alaska. To assess readily bioavailable SOC, we quantified salt (0.5 M K2SO4) extractable organic matter (SEOM), which correlates well with carbon mineralization rates in short-term soil incubations. To assess the relative degradation state of SOC, we used particle size fractionation to isolate fibric (coarse) from more degraded (fine) particulate organic matter (POM) and separated mineral-associated organic matter into silt- and clay-sized fractions. On average, bulk SOC concentrations in permafrost were lower than in comparable active layer horizons. Although SEOM represented a very small proportion of the bulk SOC, this proportion was greater in permafrost than in comparable active layer soils. A large proportion of bulk SOC was found in POM for all horizons. Even for mineral soils, about 40% of bulk SOC was in POM pools, indicating that organic matter in both active layer and permafrost mineral soils was relatively undecomposed compared to typical temperate soils. Not surprisingly, organic soils had a greater proportion of POM and mineral soils had greater silt- and clay-sized carbon pools, while cryoturbated soils were intermediate. For organic horizons, permafrost organic matter was generally more degraded than in comparable active layer horizons. However, in mineral and cryoturbated horizons, the presence of permafrost appeared to have little effect on SOC distribution among size fractions. Future studies will investigate the utility of using organic matter pools defined by SEOM and particle size to predict the bioavailable pools characterized through more time-consuming long-term incubation studies of permafrost region soils.

Coincident aboveground and belowground autonomous monitoring to quantify covariability in permafrost, soil, and vegetation properties in Arctic tundra

NASA Astrophysics Data System (ADS)

Dafflon, Baptiste; Oktem, Rusen; Peterson, John; Ulrich, Craig; Tran, Anh Phuong; Romanovsky, Vladimir; Hubbard, Susan S.

2017-06-01

Coincident monitoring of the spatiotemporal distribution of and interactions between land, soil, and permafrost properties is important for advancing our understanding of ecosystem dynamics. In this study, a novel monitoring strategy was developed to quantify complex Arctic ecosystem responses to the seasonal freeze-thaw-growing season conditions. The strategy exploited autonomous measurements obtained through electrical resistivity tomography to monitor soil properties, pole-mounted optical cameras to monitor vegetation dynamics, point probes to measure soil temperature, and periodic manual measurements of thaw layer thickness, snow thickness, and soil dielectric permittivity. The spatially and temporally dense monitoring data sets revealed several insights about tundra system behavior at a site located near Barrow, AK. In the active layer, the soil electrical conductivity (a proxy for soil water content) indicated an increasing positive correlation with the green chromatic coordinate (a proxy for vegetation vigor) over the growing season, with the strongest correlation (R = 0.89) near the typical peak of the growing season. Soil conductivity and green chromatic coordinate also showed significant positive correlations with thaw depth, which is influenced by soil and surface properties. In the permafrost, soil electrical conductivity revealed annual variations in solute concentration and unfrozen water content, even at temperatures well below 0°C in saline permafrost. These conditions may contribute to an acceleration of long-term thaw in Coastal permafrost regions. Demonstration of this first aboveground and belowground geophysical monitoring approach within an Arctic ecosystem illustrates its significant potential to remotely "visualize" permafrost, soil, and vegetation ecosystem codynamics in high resolution over field relevant scales.

Freeze-Thaw Cycles and Soil Biogeochemistry: Implications for Greenhouse Gas emission

NASA Astrophysics Data System (ADS)

Rezanezhad, F.; Milojevic, T.; Oh, D. H.; Parsons, C. T.; Smeaton, C. M.; Van Cappellen, P.

2016-12-01

Freeze-thaw cycles represent a major natural climate forcing acting on soils at middle and high latitudes. Repeated freezing and thawing of soils changes their physical properties, geochemistry, and microbial community structure, which together govern the biogeochemical cycling of carbon and nutrients. In this presentation, we focus on how freeze-thaw cycles regulate carbon and nitrogen cycling and how these transformations influence greenhouse gas (GHG) fluxes. We present a novel approach, which combines the acquisition of physical and chemical data in a newly developed experimental soil column system. This system simulates realistic soil temperature profiles during freeze-thaw cycles. A high-resolution, Multi-Fiber Optode (MuFO) microsensor technique was used to detect oxygen (O2) continuously in the column at multiple depths. Surface and subsurface changes to gas and aqueous phase chemistry were measured to delineate the pathways and quantify soil respiration rates during freeze-thaw cycles. The results indicate that the time-dependent release of GHG from the soil surface is influenced by a combination of two key factors. Firstly, fluctuations in temperature and O2 availability affect soil biogeochemical activity and GHG production. Secondly, the recurrent development of a physical ice barrier prevents exchange of gaseous compounds between the soil and atmosphere during freezing conditions; removal of this barrier during thaw conditions increases GHG fluxes. During freezing, O2 levels in the unsaturated zone decreased due to restricted gas exchange with the atmosphere. As the soil thawed, O2 penetrated deeper into the soil enhancing the aerobic mineralization of organic carbon and nitrogen. Additionally, with the onset of thawing a pulse of gas flux occurred, which is attributed to the build-up of respiratory gases in the pore space during freezing. The latter implies enhanced anaerobic respiration as O2 supply ceases when the upper soil layer freezes.

Response of changes in seasonal soil freeze/thaw state to climate change from 1950 to 2010 across china

NASA Astrophysics Data System (ADS)

Peng, Xiaoqing; Frauenfeld, Oliver W.; Cao, Bin; Wang, Kang; Wang, Huijuan; Su, Hang; Huang, Zhe; Yue, Dongxia; Zhang, Tingjun

2016-11-01

Variations in seasonal soil freeze/thaw state are important indicators of climate change and influence ground temperature, hydrological processes, surface energy, and the moisture balance. Previous studies mainly focused on the active layer and permafrost, while seasonally frozen ground research in nonpermafrost regions has received less attention. In this study, we investigate the response of changes in seasonal soil freeze/thaw state to changes in air temperatures by combining observations from more than 800 stations with gridded mean monthly air temperature data across China. The results show that mean annual air temperature (MAAT) increased statistically significantly by 0.29 ± 0.03°C/decade from 1967 to 2013, with greater warming on the Qinghai-Tibetan Plateau. There is a statistically significant decrease in the freeze/thaw cycle (FTC) at 0.39 ± 0.05 cycles/decade. In addition, there are strong negative correlations between FTC and MAAT. Estimating the soil freeze/thaw state classification based on the number of days in the month, we find that changes of mean annual area extent of seasonal soil freeze/thaw state decreased significantly for completely frozen (CF) ground, while the area extent of partially frozen (PF) and unfrozen (UF) ground both increased. Changes in mean monthly area extent of seasonal soil freeze/thaw state indicate that the extent of CF and UF area was decreasing and increasing, respectively. But for the extent of PF areas, both increasing and decreasing trends were observed. Quantifying the spatial pattern of the seasonal soil freeze/thaw, we find that CF and PF areas are located in northern China and the Tibetan Plateau from December to March, and UF areas are located in southern China. The variations of mean annual area extent departure of soil freeze/thaw states are consistent with MAAT changes in different land cover types across China.

High-resolution mapping of ecosystem carbon storage and potential effects of permafrost thaw in periglacial terrain, European Russian Arctic

NASA Astrophysics Data System (ADS)

Hugelius, Gustaf; Virtanen, Tarmo; Kaverin, Dmitry; Pastukhov, Alexander; Rivkin, Felix; Marchenko, Sergey; Romanovsky, Vladimir; Kuhry, Peter

2011-09-01

This study describes detailed partitioning of phytomass carbon (C) and soil organic carbon (SOC) for four study areas in discontinuous permafrost terrain, Northeast European Russia. The mean aboveground phytomass C storage is 0.7 kg C m-2. Estimated landscape SOC storage in the four areas varies between 34.5 and 47.0 kg C m-2 with LCC (land cover classification) upscaling and 32.5-49.0 kg C m-2 with soil map upscaling. A nested upscaling approach using a Landsat thematic mapper land cover classification for the surrounding region provides estimates within 5 ± 5% of the local high-resolution estimates. Permafrost peat plateaus hold the majority of total and frozen SOC, especially in the more southern study areas. Burying of SOC through cryoturbation of O- or A-horizons contributes between 1% and 16% (mean 5%) of total landscape SOC. The effect of active layer deepening and thermokarst expansion on SOC remobilization is modeled for one of the four areas. The active layer thickness dynamics from 1980 to 2099 is modeled using a transient spatially distributed permafrost model and lateral expansion of peat plateau thermokarst lakes is simulated using geographic information system analyses. Active layer deepening is expected to increase the proportion of SOC affected by seasonal thawing from 29% to 58%. A lateral expansion of 30 m would increase the amount of SOC stored in thermokarst lakes/fens from 2% to 22% of all SOC. By the end of this century, active layer deepening will likely affect more SOC than thermokarst expansion, but the SOC stores vulnerable to thermokarst are less decomposed.

Understanding of changes in river flow using recently collected field and observational data from Russian Arctic

NASA Astrophysics Data System (ADS)

Shiklomanov, A. I.; Tokarev, I. V.; Davydov, S. P.; Davydova, A.; Streletskiy, D. A.

2017-12-01

There is substantial evidence supporting increasing river runoff in the Eurasian pan-Arctic, but the causes of these changes are not well understood. To determine the contributions of various water sources to river runoff generation in small streams and large rivers located in the continuous permafrost zone, an extensive field campaign was carried out near the town of Cherskii, Russia. Measurements of hydrometeorological characteristics, as well as stable isotope composition and hydrochemistry of precipitation, river flow and ground ice, were obtained during the 2013-2016 period. When combined with older data (2005-2009), the isotopic composition of atmospheric precipitation showed a general trend towards heavier winter precipitation, attributed mainly to observed increases in winter air temperature. Samples of water and ground ice from several boreholes showed that isotopic compositions of water from the active layer, transient layer and permafrost are significantly different. Thus, stable isotopes can be used to assess contributions of different soil layers to stream flow generation. Increases in streamflow of small test watersheds were observed during dry periods in August-September. These increases were associated with considerable stable isotope depletion in streamflow samples, which is likely caused by thawing of the transient- and possibly upper permafrost layers. The absence of correlation between water and air temperature during these periods (R2 = 0.22 in August-September and R2 = 0.8 in June-July) also suggests an increasing contribution of thawing ground ice to the streamflow. To quantitatively assess the contribution of various water sources to the river runoff of Kolyma River, we used stable isotope data along with a physically based hydrological model developed at the University of New Hampshire. Preliminary results suggest that thawing permafrost increased August-September discharge in Kolyma near Cherskii by 8% in 2013, 11% in 2014 and 4% in 2015, even though none of these years was extremely warm or wet. We estimate that 5cm of permafrost thaw (with 30% ice content) over the entire Kolyma basin can contribute about 10 km3/year (or 10%) to annual discharge and significantly change the water regime during low-flow periods (fall-winter).

InSAR detects possible thaw settlement in the Alaskan Arctic Coastal Plain

USGS Publications Warehouse

Rykhus, Russell P.; Lu, Zhong

2008-01-01

Satellite interferometric synthetic aperture radar (InSAR) has proven to be an effective tool for monitoring surface deformation from volcanoes, earthquakes, landslides, and groundwater withdrawal. This paper seeks to expand the list of applications of InSAR data to include monitoring subsidence possibly associated with thaw settlement over the Alaskan Arctic Coastal Plain. To test our hypothesis that InSAR data are sufficiently sensitive to detect subsidence associated with thaw settlement, we acquired all Japanese Earth Resources Satellite-1 (JERS-1) L-band data available for the summers of 1996, 1997, and 1998 over two sites on the Alaska North Slope. The least amount of subsidence for both study sites was detected in the interferograms covering the summer of 1996 (2-3 cm), interferograms from 1997 and 1998 revealed that about 3 cm of subsidence occurred at the northern Cache One Lake site, and about 5 cm of subsidence was detected at the southern Kaparuk River site. These preliminary results illustrate the capacity of the L-band (24 cm) wavelength JERS-1 radar data to penetrate the short Arctic vegetation to monitor subsidence possibly associated with thaw settlement of the active layer and (or) other hydrologic changes over relatively large areas.

Effect of soil property uncertainties on permafrost thaw projections: A calibration-constrained analysis

DOE PAGES

Harp, Dylan R.; Atchley, Adam L.; Painter, Scott L.; ...

2016-02-11

Here, the effect of soil property uncertainties on permafrost thaw projections are studied using a three-phase subsurface thermal hydrology model and calibration-constrained uncertainty analysis. The Null-Space Monte Carlo method is used to identify soil hydrothermal parameter combinations that are consistent with borehole temperature measurements at the study site, the Barrow Environmental Observatory. Each parameter combination is then used in a forward projection of permafrost conditions for the 21more » $$^{st}$$ century (from calendar year 2006 to 2100) using atmospheric forcings from the Community Earth System Model (CESM) in the Representative Concentration Pathway (RCP) 8.5 greenhouse gas concentration trajectory. A 100-year projection allows for the evaluation of intra-annual uncertainty due to soil properties and the inter-annual variability due to year to year differences in CESM climate forcings. After calibrating to borehole temperature data at this well-characterized site, soil property uncertainties are still significant and result in significant intra-annual uncertainties in projected active layer thickness and annual thaw depth-duration even with a specified future climate. Intra-annual uncertainties in projected soil moisture content and Stefan number are small. A volume and time integrated Stefan number decreases significantly in the future climate, indicating that latent heat of phase change becomes more important than heat conduction in future climates. Out of 10 soil parameters, ALT, annual thaw depth-duration, and Stefan number are highly dependent on mineral soil porosity, while annual mean liquid saturation of the active layer is highly dependent on the mineral soil residual saturation and moderately dependent on peat residual saturation. By comparing the ensemble statistics to the spread of projected permafrost metrics using different climate models, we show that the effect of calibration-constrained uncertainty in soil properties, although significant, is less than that produced by structural climate model uncertainty for this location.« less

Effect of soil property uncertainties on permafrost thaw projections: A calibration-constrained analysis

DOE PAGES

Harp, D. R.; Atchley, A. L.; Painter, S. L.; ...

2015-06-29

The effect of soil property uncertainties on permafrost thaw projections are studied using a three-phase subsurface thermal hydrology model and calibration-constrained uncertainty analysis. The Null-Space Monte Carlo method is used to identify soil hydrothermal parameter combinations that are consistent with borehole temperature measurements at the study site, the Barrow Environmental Observatory. Each parameter combination is then used in a forward projection of permafrost conditions for the 21st century (from calendar year 2006 to 2100) using atmospheric forcings from the Community Earth System Model (CESM) in the Representative Concentration Pathway (RCP) 8.5 greenhouse gas concentration trajectory. A 100-year projection allows formore » the evaluation of intra-annual uncertainty due to soil properties and the inter-annual variability due to year to year differences in CESM climate forcings. After calibrating to borehole temperature data at this well-characterized site, soil property uncertainties are still significant and result in significant intra-annual uncertainties in projected active layer thickness and annual thaw depth-duration even with a specified future climate. Intra-annual uncertainties in projected soil moisture content and Stefan number are small. A volume and time integrated Stefan number decreases significantly in the future climate, indicating that latent heat of phase change becomes more important than heat conduction in future climates. Out of 10 soil parameters, ALT, annual thaw depth-duration, and Stefan number are highly dependent on mineral soil porosity, while annual mean liquid saturation of the active layer is highly dependent on the mineral soil residual saturation and moderately dependent on peat residual saturation. As a result, by comparing the ensemble statistics to the spread of projected permafrost metrics using different climate models, we show that the effect of calibration-constrained uncertainty in soil properties, although significant, is less than that produced by structural climate model uncertainty for this location.« less

Effect of soil property uncertainties on permafrost thaw projections: a calibration-constrained analysis

NASA Astrophysics Data System (ADS)

Harp, D. R.; Atchley, A. L.; Painter, S. L.; Coon, E. T.; Wilson, C. J.; Romanovsky, V. E.; Rowland, J. C.

2016-02-01

The effects of soil property uncertainties on permafrost thaw projections are studied using a three-phase subsurface thermal hydrology model and calibration-constrained uncertainty analysis. The null-space Monte Carlo method is used to identify soil hydrothermal parameter combinations that are consistent with borehole temperature measurements at the study site, the Barrow Environmental Observatory. Each parameter combination is then used in a forward projection of permafrost conditions for the 21st century (from calendar year 2006 to 2100) using atmospheric forcings from the Community Earth System Model (CESM) in the Representative Concentration Pathway (RCP) 8.5 greenhouse gas concentration trajectory. A 100-year projection allows for the evaluation of predictive uncertainty (due to soil property (parametric) uncertainty) and the inter-annual climate variability due to year to year differences in CESM climate forcings. After calibrating to measured borehole temperature data at this well-characterized site, soil property uncertainties are still significant and result in significant predictive uncertainties in projected active layer thickness and annual thaw depth-duration even with a specified future climate. Inter-annual climate variability in projected soil moisture content and Stefan number are small. A volume- and time-integrated Stefan number decreases significantly, indicating a shift in subsurface energy utilization in the future climate (latent heat of phase change becomes more important than heat conduction). Out of 10 soil parameters, ALT, annual thaw depth-duration, and Stefan number are highly dependent on mineral soil porosity, while annual mean liquid saturation of the active layer is highly dependent on the mineral soil residual saturation and moderately dependent on peat residual saturation. By comparing the ensemble statistics to the spread of projected permafrost metrics using different climate models, we quantify the relative magnitude of soil property uncertainty to another source of permafrost uncertainty, structural climate model uncertainty. We show that the effect of calibration-constrained uncertainty in soil properties, although significant, is less than that produced by structural climate model uncertainty for this location.

Effect of soil property uncertainties on permafrost thaw projections: a calibration-constrained analysis

NASA Astrophysics Data System (ADS)

Harp, D. R.; Atchley, A. L.; Painter, S. L.; Coon, E. T.; Wilson, C. J.; Romanovsky, V. E.; Rowland, J. C.

2015-06-01

The effect of soil property uncertainties on permafrost thaw projections are studied using a three-phase subsurface thermal hydrology model and calibration-constrained uncertainty analysis. The Null-Space Monte Carlo method is used to identify soil hydrothermal parameter combinations that are consistent with borehole temperature measurements at the study site, the Barrow Environmental Observatory. Each parameter combination is then used in a forward projection of permafrost conditions for the 21st century (from calendar year 2006 to 2100) using atmospheric forcings from the Community Earth System Model (CESM) in the Representative Concentration Pathway (RCP) 8.5 greenhouse gas concentration trajectory. A 100-year projection allows for the evaluation of intra-annual uncertainty due to soil properties and the inter-annual variability due to year to year differences in CESM climate forcings. After calibrating to borehole temperature data at this well-characterized site, soil property uncertainties are still significant and result in significant intra-annual uncertainties in projected active layer thickness and annual thaw depth-duration even with a specified future climate. Intra-annual uncertainties in projected soil moisture content and Stefan number are small. A volume and time integrated Stefan number decreases significantly in the future climate, indicating that latent heat of phase change becomes more important than heat conduction in future climates. Out of 10 soil parameters, ALT, annual thaw depth-duration, and Stefan number are highly dependent on mineral soil porosity, while annual mean liquid saturation of the active layer is highly dependent on the mineral soil residual saturation and moderately dependent on peat residual saturation. By comparing the ensemble statistics to the spread of projected permafrost metrics using different climate models, we show that the effect of calibration-constrained uncertainty in soil properties, although significant, is less than that produced by structural climate model uncertainty for this location.

Interpreting Carbon Fluxes from a Spatially Heterogeneous Peatland with Thawing Permafrost: Scaling from Plant Community Scale to Ecosystem Scale

NASA Astrophysics Data System (ADS)

Harder, S. R.; Roulet, N. T.; Strachan, I. B.; Crill, P. M.; Persson, A.; Pelletier, L.; Watt, C.

2014-12-01

Various microforms, created by spatial differential thawing of permafrost, make up the subarctic heterogeneous Stordalen peatland complex (68°22'N, 19°03'E), near Abisko, Sweden. This results in significantly different peatland vegetation communities across short distances, as well as differences in wetness, temperature and peat substrates. We have been measuring the spatially integrated CO2, heat and water vapour fluxes from this peatland complex using eddy covariance and the CO2 exchange from specific plant communities within the EC tower footprint since spring 2008. With this data we are examining if it is possible to derive the spatially integrated ecosystem-wide fluxes from community-level simple light use efficiency (LUE) and ecosystem respiration (ER) models. These models have been developed using several years of continuous autochamber flux measurements for the three major plant functional types (PFTs) as well as knowledge of the spatial variability of the vegetation, water table and active layer depths. LIDAR was used to produce a 1 m resolution digital evaluation model of the complex and the spatial distribution of PFTs was obtained from concurrent high-resolution digital colour air photography trained from vegetation surveys. Continuous water table depths have been measured for four years at over 40 locations in the complex, and peat temperatures and active layer depths are surveyed every 10 days at more than 100 locations. The EC footprint is calculated for every half-hour and the PFT based models are run with the corresponding environmental variables weighted for the PFTs within the EC footprint. Our results show that the Sphagnum, palsa, and sedge PFTs have distinctly different LUE models, and that the tower fluxes are dominated by a blend of the Sphagnum and palsa PFTs. We also see a distinctly different energy partitioning between the fetches containing intact palsa and those with thawed palsa: the evaporative efficiency is higher and the Bowen ration lower for the thawed palsa fetches.

Electron acceptor-based regulation of microbial greenhouse gas production from thawing permafrost

NASA Astrophysics Data System (ADS)

Bak, Ebbe; Jones, Eleanor; Yde, Jacob; Hodson, Andy; Mallon, Gunnar; Fisnter, Kai

2017-04-01

Permafrost contains about 35% of the global soil organic carbon (0-3 m depth). As a consequence of global warming, the active layer thickness is steadily increasing and its organic carbon is becoming available for degradation, causing a concomitant release of CO2 and CH4. The climate forcing feedbacks of permafrost thaw are determined by the rate of organic carbon degradation and to which degree it is released as CO2 or CH4. Methane is produced under anoxic conditions, but the factors that regulate its production are poorly constrained. In this study, we investigate how CH4 production is influenced by the presence of competing anaerobic processes with focus on the role of iron and sulfate reduction. We have collected permafrost cores to 2.2 meters depth from three different lowland sites in Adventdalen on Svalbard. From these cores, we have prepared anoxic batch incubation for each 25 cm depth interval and followed the production of CO2 and CH4 as well as the iron and sulfate reduction. This approach allows us to monitor the rate of the CO2 and CH4 production as well as to investigate the correlation between CH4 production and competing anaerobic respiration processes in the active layer as well in the permafrost. These investigations are accompanied by characterization of the carbon, iron and sulfate content in the soil and will be followed by characterization of the microbial community structure. The aim of this study is to get a better understanding of how the availability of sulfate and iron and the microbial community structure regulate the production of CO2 and CH4 in thawing permafrost, and to elucidate how the rate of the organic carbon degradation changes with depth in permafrost-affected soils. This study improves our understanding of climate feedback mechanisms operating during permafrost thaw.

Active Layer moisture and temperature monitoring at Half Moon Island, Maritime Antarctica.

NASA Astrophysics Data System (ADS)

Michel, Roberto; Francelino, Márcio; Schaefer, Carlos; Schmitz, Daniela; Dittmar, Camila; Silva, Tássio; Loureiro, Diego

2017-04-01

Half Moon Island is a minor Antarctic island, lying in the Half Moon Bay, Livingston Island in the South Shetland Islands of the Antarctic Peninsula region. Having the Mc Farlane Strait at its western shore the island was formed by the junction of three smaller islands during the Holocene, altitude at its northern portion can reach 101 m a.s.l. Its surface area is 171 hectares (420 acres). The Argentine Cámara Base is located on the island, the naval base is operational occasionally during the summer, when it's water suply comes from a near by lake. Permafrost spreads over wider areas on higher Holocene beaches being sporadic on the lowest Present-day platforms (López-Martínez et al., 2012), processes related to the presence of permafrost were observed. The mean annual air temperature is near -2°C, and average summer temperatures are higher than 0°C. These conditions allow snow cover melting and freeze-thaw cycles during summer although the annual number of air freeze-thaw cycles reported for the near by Byers Peninsula is low, 14 in summer (Blümel and Eitel, 1989; Qingsong, 1989). The objective of this study was to evaluate soil temperature and moisture content based on in situ measurements from a Cryosol developed on a Holocene beach at Half Moon Island, Maritime Antarctica. The monitoring systems consist of soil temperature probes (Campbell L107E thermocouple, accuracy of ± 0.2°C) and soil moisture probes (CS656 water content reflectometer, accuracy of ± 2.5%), placed in the active layer (Turbic Eutric Cryosol 44 m a.s.l., 5 cm, 10 cm, 30 cm, 50 cm and 100 cm, S 62°35´23.8", W 059°55´18.3"). All probes were connected to a Campbell Scientific CR 1000 data logger, recording data at every 1 hour interval. We calculated the thawing days (TD), freezing days (FD) and freezing degree days (FDD); all according to Guglielmin et al. (2008). This system recorded data of soil temperature and moisture from March 2015 to December 2016. Despite the absence of glaciers in the Island the thermal regime of the active layer showed a dominance of freezing conditions (average -1.74 °C at 5 cm and -1.46 °C at 100 cm), thaw days are concentrated February and March (44 from January until November 2016 at 5 cm being missing at 50 cm and 100 cm). At 100 cm the majority of the 642 days are classified as freeze days (192 days). Soil moisture content was very similar for 2015 and 2016, averaging 0.11, m3 m-3 (0.41 max, 0.04 min) and 0.13 m3 m-3 (0.39 max, 0.07 min) at 10 cm and 100, for the whole study period. Considering the cold season 2015 was colder, FDD summed -806 degree days at 5 cm and -674 at 100 cm (-392 and -315 degree days in 2016). Nevertheless active layer thickness reached its maximum of 140 cm in late march 2015 (118 in 2016). During the 2015 summer season the lake that supply's water to Argentine Cámara Base drained, apparently the deepening of the active layer disrupted the drainage impediment provided by the permafrost table. The active layer thermal regime over 642 day period at Half Moon Island shows a preponderance of freezing conditions; although summer data is not available for 2015, the active layer thickness reached its maximum during late march retracting in 2016.

The Effects of Permafrost Thaw on Organic Matter Quality and Availability Along a Hill Slope in Northeastern Siberia

NASA Astrophysics Data System (ADS)

Connolly, C. T.; Spawn, S.; Ludwig, S.; Schade, J. D.; Natali, S.

2014-12-01

Climate warming and permafrost thaw in northeastern Siberia are expected to change the quantity and quality of organic matter (OM) transported through watersheds, releasing previously frozen carbon (C) to biologically available pool. Hill slopes have shown to influence the distribution of OM, resulting in a downhill accumulation of available C and nutrients relative to uphill. Here we examine how future permafrost thaw will change OM quality and availability along a hill slope in a larch-dominated watershed. We collected soils from the thawed organic and mineral layers, and 1m deep permafrost cores for dissolved organic C (DOC) and total dissolved N (TDN), C composition from measures of colored dissolved organic matter (CDOM), DOC lability from biodegradable DOC (BDOC) incubations, C and nutrient availability from extracellular-enzyme assays (EEA's), and microbial respiration from aerobic soil incubations. Here we show that organic soils (O), in comparison to mineral soils (M) and permafrost (P) are the most abundant source of C (avg O DOC: 51.6mg/L), exhibiting low molecular complexity (avg O SUVA254: 4.05) and high quality. Evidence suggests permafrost OM may be an equally abundant, and more labile source of C than mineral soils (highest P DOC: 16.1 mg/L, lowest P SUVA254: 6.32; median M DOC: 18.5 mg/L, median M SUVA254: 24.0). Furthermore, we demonstrate that there may be a positive relationship in the rate of C mineralization and distance downhill, showing 15-30% greater CO2 production/gC downhill relative to uphill. Evidence also supports a similar relationship in permafrost DOC content and molecular complexity, showing more DOC of a lower complexity further downhill. This indicates DOC transport may have been occurring through the active layer and downhill during ice-rich permafrost formation, and may supply a labile source of carbon to lowland areas and adjacent stream networks upon thaw.

Exploring Viral Mediated Carbon Cycling in Thawing Permafrost Microbial Communities

NASA Astrophysics Data System (ADS)

Trubl, G. G.; Solonenko, N.; Moreno, M.; Sullivan, M. B.; Rich, V. I.

2014-12-01

Viruses are the most abundant biological entities on Earth and their impact on carbon cycling in permafrost habitats is poorly understood. Arctic C cycling is particularly important to interpret due to the rapid climate change occurring and the large amount of C stockpiled there (~1/3 of global soil C is stored in permafrost). Viruses of microbes (i.e. phages) play central roles in C cycling in the oceans, through cellular lysis (phage drive the largest ocean C flux about 150 Gt yr-1, dwarfing all others by >5-fold), production of associated DOC, as well as transport and expression during infection (1029 transduction events day-1). C cycling in thawing permafrost systems is critical in understanding the climate trajectory and phages may be as important for C cycling here as they are in the ocean. The thawed C may become a food source for microbes, producing CO2 and potentially CH4, both potent greenhouse gases. To address the potential role of phage in C cycling in these dynamic systems, we are examining phage from an arctic permafrost thaw gradient in northern Sweden. We have developed a protocol for successfully extracting phage from peat soils and are quantifying phage in 15 peat and 2 lake sediment cores, with the goal of sequencing viromes. Preliminary data suggest that phage are present at 109 g-1 across the permafrost thaw gradient (compared to the typical marine count ~105 ml-1), implying a potentially robust phage-host interaction web in these changing environments. We are examining phage from 11 depth intervals (covering the active and permafrost layer) in the cores to assess phage-host community dynamics. Phage morphology and abundance for each layer and environment are being determined using qTEM and EFM. Understanding the phage that infect bacteria and archaea in these rapidly changing habitats will provide insight into the controls on current and future CH4 and CO2 emissions in permafrost habitats.

Plant nutrient acquisition strategies in tundra species: at which soil depth do species take up their nitrogen?

NASA Astrophysics Data System (ADS)

Limpens, Juul; Heijmans, Monique; Nauta, Ake; van Huissteden, Corine; van Rijssel, Sophie

2016-04-01

The Arctic is warming at unprecedented rates. Increased thawing of permafrost releases nutrients locked up in the previously frozen soils layers, which may initiate shifts in vegetation composition. The direction in which the vegetation shifts will co-determine whether Arctic warming is mitigated or accelerated, making understanding successional trajectories urgent. One of the key factors influencing the competitive relationships between plant species is their access to nutrients, in particularly nitrogen (N). We assessed the depth at which plant species took up N by performing a 15N tracer study, injecting 15(NH4)2SO4 at three depths (5, 15, 20 cm) into the soil in arctic tundra in north-eastern Siberia in July. In addition we explored plant nutrient acquisition strategy by analyzing natural abundances of 15N in leaves. We found that vascular plants took up 15N at all injection depths, irrespective of species, but also that species showed a clear preference for specific soil layers that coincided with their functional group (graminoids, dwarf shrubs, cryptogams). Graminoids took up most 15N at 20 cm depth nearest to the thaw front, with grasses showing a more pronounced preference than sedges. Dwarf shrubs took up most 15N at 5 cm depth, with deciduous shrubs displaying more preference than evergreens. Cryptogams did not take up any of the supplied 15N . The natural 15N abundances confirmed the pattern of nutrient acquisition from deeper soil layers in graminoids and from shallow soil layers in both deciduous and evergreen dwarf shrubs. Our results prove that graminoids and shrubs differ in their N uptake strategies, with graminoids profiting from nutrients released at the thaw front, whereas shrubs forage in the upper soil layers. The above implies that graminoids, grasses in particular, will have a competitive advantage over shrubs as the thaw front proceeds and/or superficial soil layers dry out. Our results suggest that the vertical distribution of nutrients over the soil will play an important role in vegetation succession as permafrost thaw progresses.

The role of climate change in regulating Arctic permafrost peatland hydrological and vegetation change over the last millennium

NASA Astrophysics Data System (ADS)

Zhang, Hui; Piilo, Sanna R.; Amesbury, Matthew J.; Charman, Dan J.; Gallego-Sala, Angela V.; Väliranta, Minna M.

2018-02-01

Climate warming has inevitable impacts on the vegetation and hydrological dynamics of high-latitude permafrost peatlands. These impacts in turn determine the role of these peatlands in the global biogeochemical cycle. Here, we used six active layer peat cores from four permafrost peatlands in Northeast European Russia and Finnish Lapland to investigate permafrost peatland dynamics over the last millennium. Testate amoeba and plant macrofossils were used as proxies for hydrological and vegetation changes. Our results show that during the Medieval Climate Anomaly (MCA), Russian sites experienced short-term permafrost thawing and this induced alternating dry-wet habitat changes eventually followed by desiccation. During the Little Ice Age (LIA) both sites generally supported dry-hummock habitats, at least partly driven by permafrost aggradation. However, proxy data suggest that occasionally, MCA habitat conditions were drier than during the LIA, implying that evapotranspiration may create important additional eco-hydrological feedback mechanisms under warm conditions. All sites showed a tendency towards dry conditions as inferred from both proxies starting either from ca. 100 years ago or in the past few decades after slight permafrost thawing, suggesting that recent warming has stimulated surface desiccation rather than deeper permafrost thawing. This study shows links between two important controls over hydrology and vegetation changes in high-latitude peatlands: direct temperature-induced surface layer response and deeper permafrost layer-related dynamics. These data provide important backgrounds for predictions of Arctic permafrost peatlands and related feedback mechanisms. Our results highlight the importance of increased evapotranspiration and thus provide an additional perspective to understanding of peatland-climate feedback mechanisms.

Physical and ecological changes associated with warming permafrost and thermokarst in interior Alaska

Treesearch

T.E. Osterkamp; M.T. Jorgenson; E.A.G. Schuur; Y.L. Shur; M.Z. Kanevskiy; J.G. Vogel; V.E. Tumskoy

2009-01-01

Observations and measurements were made of physical and ecological changes that have occurred since 1985 at a tundra site near Healy, Alaska. Air temperatures decreased (1985 through 1999) while permafrost warmed and thawed creating thermokarst terrain, probably as a result of increased snow depths. Permafrost, active layer and ground-ice conditions at the Healy site...

High severity experimental burns in Siberian larch forests increase permafrost thaw and larch tree regeneration

NASA Astrophysics Data System (ADS)

Alexander, H. D.; Davydov, S.; Zimov, N.; Mack, M. C.

2013-12-01

Global change models predict increased fire activity in boreal forests as climate warms and dries. We hypothesized that fire-driven decreases in soil organic layer (SOL) depth will (1) increase permafrost thaw by reducing the insulating capacity of the SOL and (2) improve seedbed conditions for tree regeneration. Over time, these changes will lead to altered patterns of above- and belowground carbon (C) accumulation. To test these hypotheses, we conducted plot-level experimental burns in July 2012 in a low-density, mature larch stand near the Northeast Science Station in Cherskii, Siberia. Dried fuels of naturally occurring vegetation were added to plots to achieve four burn severity treatments based on residual SOL depths: control, low (> 8 cm), moderate (5-8 cm), and high severity (2-5 cm). Pre-fire and during two growing seasons post-fire, we measured thaw depth, soil moisture, and soil temperature to determine severity effects on permafrost thaw. We also sowed larch seeds in fall 2012 and quantified germination rates the following growing season. By 1 wk post-fire, thaw depth was 15-25 cm deeper in plots burned at high severity (55 cm) compared to other treatments (30-40 cm). These differences in thaw depth with burn severity were maintained during the subsequent growing season and were associated with increased soil temperature and moisture. Larch regeneration was 10x higher on severely burned plots than those unburned. Our findings highlight the potential for increased fire severity to degrade permafrost and alter successional dynamics and patterns of C accumulation.

The effect of permafrost thaw on short- and long-term carbon accumulation in permafrost mires

NASA Astrophysics Data System (ADS)

Olid, Carolina; Klaminder, Jonatan; Monteux, Sylvain; Johansson, Margareta; Dorrepaal, Ellen

2017-04-01

Permafrost stores twice as much carbon (C) as is currently present in the atmosphere. During recent years, warmer temperatures in the Arctic has caused rapid thawing of permafrost, which have dramatically altered permafrost C storage by increasing both microbial decomposition and plant productivity. Although current research focuses on the effects of climate change on these two processes, there are still no scientific consensus about the magnitude or even the direction of future C feedbacks from permafrost ecosystems. Field manipulation experiments have been widely used during the last decade to improve our knowledge about the net effects of permafrost thaw in the permafrost C storage. However, due to the slow response (decades) of permafrost ecosystems to environmental changes and the short-time nature of these experiments (usually shorter than 5-9 years), there are still concerns when attempting to extrapolate the results to predict long term effects. In addition, measurements are mostly taken exclusively during the summer season, without taking into account inter-annual variability in C fluxes and underestimating microbial activity throughout the cold season. The need to develop a comprehensive understanding of C fluxes over the entire year and at long temporal scales sets the basis of this study. This study aims to quantify the effects of permafrost thawing in permafrost C fluxes using a 12 years permafrost thaw experiment in northern Sweden. Our aims were to quantify the effect of permafrost thaw in both decomposition and primary production in active layer and newly thawed permafrost, and its implications for the C balance. Based on previous observations, we hypothesized that 1) soil decomposition rates were higher in manipulated thaw plots. However, 2) the observed increase in nutrients availability and the higher presence of vascular plants after thawing stimulate primary production, which compensates to some extent the increased C losses by respiration. To validate these hypotheses, an empirically based peat development model was applied to peat cores collected from manipulated thaw (n=6) and control (n=6) plots. Short- (decades) and long-(centuries) term C accumulation rates were estimated using a combined 210Pb and 14C chronology. In contrast to previous studies, our approach is long term and allows applying an empirical mass balance to evaluate depth-explicit changes in C inputs, C losses, and net C accumulation rates in response to permafrost thaw. Comparing shallow versus deep soil C does not only reflect short versus long-term C dynamics but also shows how the responses vary depending on different soil conditions. Our goal is to provide insights to better understand permafrost C dynamics to improve theoretical and predictive climate impact models.

Quality of Clotting Factor Activity in Fresh Frozen Plasma at Thaw with a Microwave System and after Storage at 4 degrees C for 48 Hours.

PubMed

Kuta, Piotr; Hauck-Dlimi, Barbara; Strobel, Julian; Zimmermann, Robert; Eckstein, Reinhold

2016-01-01

Uncontrolled hemorrhage in polytrauma patients usually results in rapid need of blood products. Despite the shorter thawing times of microwave devices for heating fresh frozen plasma (FFP), their use has remained controversial, and just a few laboratory analyses have been published on this topic. The aim of this study was to analyse the quality of clotting factors immediately after thawing FFP with a microwave device and after 48-hour post thaw storage at 4 degrees C. 24 FFP units of all four ABO blood groups (six of each blood group) were thawed with a Transfusio-therm 2000 and later stored at 4 degrees C for 48 hours. Samples were drawn aseptically and investigated on various clotting factors and protein proteases (fibrinogen, antithrombin, FII, FV, FVII, FVIII, FIX, FX, FXI, FXIII, vWF antigen and activity, protein S, and protein C) using standard coagulation and chromogenic assays immediately after thawing and again after a 48-hour storage period at 4 degrees C. All units were tested for both anaerobic and aerobic microbial contamination using standard operating procedures immediately after thawing. After thawing, all coagulation factors and protein protease activities were within normal ranges. Blood group O individuals had approximately 25% lower plasma levels of vWF antigen and activity. After a 48-hour storage period at 4 degrees C, FVIII and FIX activities declined significantly in all blood groups, whereas the remaining clotting factors remained comparably stable. Immediately after rapid thawing using a microwave system, all FFP units contained adequate coagulation factor activities to maintain hemostatic activity at the time of product thaw. The post thaw refrigerated storage caused an anticipated decrease in factor VIII and IX activities, but retained normal coagulation factor levels of many plasma proteins. Therefore we conclude that the Transfusio-therm 2000 has no clinically significant influence on the activity of clotting factors and plasma proteases in FFP units.

Observation-based modelling of permafrost carbon fluxes with accounting for deep carbon deposits and thermokarst activity

NASA Astrophysics Data System (ADS)

Schneider von Deimling, T.; Grosse, G.; Strauss, J.; Schirrmeister, L.; Morgenstern, A.; Schaphoff, S.; Meinshausen, M.; Boike, J.

2015-06-01

High-latitude soils store vast amounts of perennially frozen and therefore inert organic matter. With rising global temperatures and consequent permafrost degradation, a part of this carbon stock will become available for microbial decay and eventual release to the atmosphere. We have developed a simplified, two-dimensional multi-pool model to estimate the strength and timing of future carbon dioxide (CO2) and methane (CH4) fluxes from newly thawed permafrost carbon (i.e. carbon thawed when temperatures rise above pre-industrial levels). We have especially simulated carbon release from deep deposits in Yedoma regions by describing abrupt thaw under newly formed thermokarst lakes. The computational efficiency of our model allowed us to run large, multi-centennial ensembles under various scenarios of future warming to express uncertainty inherent to simulations of the permafrost carbon feedback. Under moderate warming of the representative concentration pathway (RCP) 2.6 scenario, cumulated CO2 fluxes from newly thawed permafrost carbon amount to 20 to 58 petagrams of carbon (Pg-C) (68% range) by the year 2100 and reach 40 to 98 Pg-C in 2300. The much larger permafrost degradation under strong warming (RCP8.5) results in cumulated CO2 release of 42 to 141 Pg-C and 157 to 313 Pg-C (68% ranges) in the years 2100 and 2300, respectively. Our estimates only consider fluxes from newly thawed permafrost, not from soils already part of the seasonally thawed active layer under pre-industrial climate. Our simulated CH4 fluxes contribute a few percent to total permafrost carbon release yet they can cause up to 40% of total permafrost-affected radiative forcing in the 21st century (upper 68% range). We infer largest CH4 emission rates of about 50 Tg-CH4 per year around the middle of the 21st century when simulated thermokarst lake extent is at its maximum and when abrupt thaw under thermokarst lakes is taken into account. CH4 release from newly thawed carbon in wetland-affected deposits is only discernible in the 22nd and 23rd century because of the absence of abrupt thaw processes. We further show that release from organic matter stored in deep deposits of Yedoma regions crucially affects our simulated circumpolar CH4 fluxes. The additional warming through the release from newly thawed permafrost carbon proved only slightly dependent on the pathway of anthropogenic emission and amounts to about 0.03-0.14 °C (68% ranges) by end of the century. The warming increased further in the 22nd and 23rd century and was most pronounced under the RCP6.0 scenario, adding 0.16 to 0.39 °C (68% range) to simulated global mean surface air temperatures in the year 2300.

Observation-based modelling of permafrost carbon fluxes with accounting for deep carbon deposits and thermokarst activity

NASA Astrophysics Data System (ADS)

Schneider von Deimling, T.; Grosse, G.; Strauss, J.; Schirrmeister, L.; Morgenstern, A.; Schaphoff, S.; Meinshausen, M.; Boike, J.

2014-12-01

High-latitude soils store vast amounts of perennially frozen and therefore inert organic matter. With rising global temperatures and consequent permafrost degradation, a part of this carbon store will become available for microbial decay and eventual release to the atmosphere. We have developed a simplified, two-dimensional multi-pool model to estimate the strength and timing of future carbon dioxide (CO2) and methane (CH4) fluxes from newly thawed permafrost carbon (i.e. carbon thawed when temperatures rise above pre-industrial levels). We have especially simulated carbon release from deep deposits in Yedoma regions by describing abrupt thaw under thermokarst lakes. The computational efficiency of our model allowed us to run large, multi-centennial ensembles under various scenarios of future warming to express uncertainty inherent to simulations of the permafrost-carbon feedback. Under moderate warming of the representative concentration pathway (RCP) 2.6 scenario, cumulated CO2 fluxes from newly thawed permafrost carbon amount to 20 to 58 petagrammes of carbon (Pg-C) (68% range) by the year 2100 and reach 40 to 98 Pg-C in 2300. The much larger permafrost degradation under strong warming (RCP8.5) results in cumulated CO2 release of 42-141 and 157-313 Pg-C (68% ranges) in the years 2100 and 2300, respectively. Our estimates do only consider fluxes from newly thawed permafrost but not from soils already part of the seasonally thawed active layer under preindustrial climate. Our simulated methane fluxes contribute a few percent to total permafrost carbon release yet they can cause up to 40% of total permafrost-affected radiative forcing in the 21st century (upper 68% range). We infer largest methane emission rates of about 50 Tg-CH4 year-1 around the mid of the 21st century when simulated thermokarst lake extent is at its maximum and when abrupt thaw under thermokarst lakes is accounted for. CH4 release from newly thawed carbon in wetland-affected deposits is only discernible in the 22nd and 23rd century because of the absence of abrupt thaw processes. We further show that release from organic matter stored in deep deposits of Yedoma regions does crucially affect our simulated circumpolar methane fluxes. The additional warming through the release from newly thawed permafrost carbon proved only slightly dependent on the pathway of anthropogenic emission and amounts about 0.03-0.14 °C (68% ranges) by end of the century. The warming increased further in the 22nd and 23rd century and was most pronounced under the RCP6.0 scenario with adding 0.16-0.39 °C (68% range) to simulated global mean surface air temperatures in the year 2300.

Seasonal Variability of Riverine Geochemistry (87Sr/86Sr, δ13CDIC, δ44/40Ca, and major ions) in Permafrost Watersheds on the North Slope of Alaska

NASA Astrophysics Data System (ADS)

Lehn, G. O.; Jacobson, A. D.; Douglas, T. A.; McClelland, J. W.; Khosh, M. S.; Barker, A. J.

2014-12-01

Global climate models predict amplified warming at high latitudes, where permafrost soils have historically acted as a carbon sink. As warming occurs, the seasonally thawed active layer will propagate downward into previously frozen mineral-rich soil, releasing carbon and introducing unique chemical weathering signatures into rivers. We use variations in the 87Sr/86Sr, δ13CDIC, δ44/40Ca, and major ion geochemistry of rivers to track seasonal active layer dynamics. We collected water from six streams on the North Slope of Alaska between May and October, 2009 and 2010. All rivers drain continuous permafrost but three drain tussock tundra-dominated watersheds and three drain steeper bedrock catchments with minor tundra coverage. In tundra streams, elevated 87Sr/86Sr ratios, low δ13CDIC values and major ions ([Na+]+[K+]/ [Ca+2]+[Mg+2]) in spring melt runoff suggest flushing of shallow soils with relatively low carbonate content. By July, 87Sr/86Sr ratios stabilize at relatively low values and δ13CDIC at relatively higher values, indicating the active layer thawed into deeper carbonate-rich soils. In bedrock streams, elevated 87Sr/86Sr ratios correlate with high discharge. By late fall, bedrock stream 87Sr/86Sr ratios decrease steadily, consistent with increased carbonate weathering. Nearly constant δ13CDIC values and high [SO4-2] for most of the melt season imply significant sulfuric acid-carbonate weathering in bedrock streams. δ13CDIC values suggest a shift to carbonic acid-carbonate weathering in late 2010, possibly due to limited oxygen for pyrite oxidation during freezing of the active layer. δ44/40Ca values in both tundra and bedrock streams increase during the seasons, suggesting increased uptake of 40Ca by plants. δ44/40Ca values of rivers are at least 0.1-0.2‰ higher than their watershed soils, rocks and sediments, suggesting significant plant uptake. Our findings show how seasonal changes in mineral weathering have potential for tracking active layer dynamics.

Fuel-reduction management alters plant composition, carbon and nitrogen pools, and soil thaw in Alaskan boreal forest

USGS Publications Warehouse

Melvin, April M.; Celis, Gerardo; Johnstone, Jill F.; McGuire, A. David; Genet, Helene; Schuur, Edward A.G.; Rupp, T. Scott; Mack, Michelle C.

2018-01-01

Increasing wildfire activity in Alaska's boreal forests has led to greater fuel-reduction management. Management has been implemented to reduce wildfire spread, but the ecological impacts of these practices are poorly known. We quantified the effects of hand-thinning and shearblading on above- and belowground stand characteristics, plant species composition, carbon (C) and nitrogen (N) pools, and soil thaw across 19 black spruce (Picea mariana) dominated sites in interior Alaska treated 2-12 years prior to sampling. The density of deciduous tree seedlings was significantly higher in shearbladed areas compared to unmanaged forest (6.4 vs. 0.1 stems m−2), and unmanaged stands exhibited the highest mean density of conifer seedlings and layers (1.4 stems m−2). Understory plant community composition was most similar between unmanaged and thinned stands. Shearblading resulted in a near complete loss of aboveground tree biomass C pools while thinning approximately halved the C pool size (1.2 kg C m−2 compared to 3.1 kg C m−2 in unmanaged forest). Significantly smaller soil organic layer (SOL) C and N pools were observed in shearbladed stands (3.2 kg C m−2 and 116.8 g N m−2) relative to thinned (6.0 kg C m−2 and 192.2 g N m−2) and unmanaged (5.9 kg C m−2 and 178.7 g N m−2) stands. No difference in C and N pool sizes in the uppermost 10 cm of mineral soil was observed among stand types. Total C stocks for measured pools was 2.6 kg C m−2 smaller in thinned stands and 5.8 kg C m−2smaller in shearbladed stands when compared to unmanaged forest. Soil thaw depth averaged 13 cm deeper in thinned areas and 46 cm deeper in shearbladed areas relative to adjacent unmanaged stands, although variability was high across sites. Deeper soil thaw was linked to shallower SOL depth for unmanaged stands and both management types, however for any given SOL depth, thaw tended to be deeper in shearbladed areas compared to unmanaged forest. These findings indicate that fuel-reduction management alters plant community composition, C and N pools, and soil thaw depth, with consequences for ecosystem structure and function beyond those intended for fire management.

Impacts of the active layer on runoff in an upland permafrost basin, northern Tibetan Plateau

PubMed Central

Zhang, Tingjun; Guo, Hong; Hu, Yuantao; Shang, Jianguo; Zhang, Yulan

2018-01-01

The paucity of studies on permafrost runoff generation processes, especially in mountain permafrost, constrains the understanding of permafrost hydrology and prediction of hydrological responses to permafrost degradation. This study investigated runoff generation processes, in addition to the contribution of summer thaw depth, soil temperature, soil moisture, and precipitation to streamflow in a small upland permafrost basin in the northern Tibetan Plateau. Results indicated that the thawing period and the duration of the zero-curtain were longer in permafrost of the northern Tibetan Plateau than in the Arctic. Limited snowmelt delayed the initiation of surface runoff in the peat permafrost in the study area. The runoff displayed intermittent generation, with the duration of most runoff events lasting less than 24 h. Precipitation without runoff generation was generally correlated with lower soil moisture conditions. Combined analysis suggested runoff generation in this region was controlled by soil temperature, thaw depth, precipitation frequency and amount, and antecedent soil moisture. This study serves as an important baseline to evaluate future environmental changes on the Tibetan Plateau. PMID:29470510

Impacts of the active layer on runoff in an upland permafrost basin, northern Tibetan Plateau.

PubMed

Gao, Tanguang; Zhang, Tingjun; Guo, Hong; Hu, Yuantao; Shang, Jianguo; Zhang, Yulan

2018-01-01

The paucity of studies on permafrost runoff generation processes, especially in mountain permafrost, constrains the understanding of permafrost hydrology and prediction of hydrological responses to permafrost degradation. This study investigated runoff generation processes, in addition to the contribution of summer thaw depth, soil temperature, soil moisture, and precipitation to streamflow in a small upland permafrost basin in the northern Tibetan Plateau. Results indicated that the thawing period and the duration of the zero-curtain were longer in permafrost of the northern Tibetan Plateau than in the Arctic. Limited snowmelt delayed the initiation of surface runoff in the peat permafrost in the study area. The runoff displayed intermittent generation, with the duration of most runoff events lasting less than 24 h. Precipitation without runoff generation was generally correlated with lower soil moisture conditions. Combined analysis suggested runoff generation in this region was controlled by soil temperature, thaw depth, precipitation frequency and amount, and antecedent soil moisture. This study serves as an important baseline to evaluate future environmental changes on the Tibetan Plateau.

The Role of Disturbance in Arctic Ecosystem Response to a Changing Climate

NASA Astrophysics Data System (ADS)

Hinzman, L. D.

2014-12-01

Wildfires in the tundra regions and the boreal forest project an immediate effect upon the surface energy and water budget by drastically altering the surface albedo, roughness, infiltration rates, and moisture absorption capacity in organic soils. Although fires create a sudden and drastic change to the landcover, it is only the beginning of a long process of recovery and perhaps a shift to a different successional pathway. In permafrost regions, these effects become part of a process of long-term (20-50 years) cumulative impacts. Burn severity may largely determine immediate impacts and long-term disturbance trajectories. As transpiration decreases or ceases, soil moisture increases markedly, remaining quite wet throughout the year. Because the insulating quality of the organic layer is removed during fires, permafrost begins to thaw near the surface and warm to greater depths. Within a few years, it may thaw to the point where it can no longer completely refreeze every winter, creating a permanently thawed layer in the soil called a talik. After formation of a talik, soils can drain internally throughout the year. At this point, soils may become quite dry, as the total precipitation received annually in the Arctic is quite low. The local ecological community must continuously adapt to the changing soil thermal and moisture regimes. The wet soils found over shallow permafrost favor black spruce forests. After a fire creates a deeper permafrost table (thicker active layer) the invading tree species tend to be birch or alder. The hydrologic and thermal regime of the soil is the primary factor controlling these vegetation trajectories and the subsequent changes in surface mass and energy fluxes. The complexities of a changing climate accentuate these processes of change and complicate predictions of the resulting vegetation trajectories. Understanding these shifts in vegetative communities and quantifying the consequences of thawing permafrost can only be accomplished through complementary analyses of field research data and numerical simulations. The permafrost dramatically controls other landscape features and its dynamic response to thermal influences yield consequent effects on the surficial ecology, water and energy balances and regional climate.

Heave, settlement and fracture of chalk during physical modelling experiments with temperature cycling above and below 0 °C

NASA Astrophysics Data System (ADS)

Murton, Julian B.; Ozouf, Jean-Claude; Peterson, Rorik

2016-10-01

To elucidate the early stages of heave, settlement and fracture of intact frost-susceptible rock by temperature cycling above and below 0 °C, two physical modelling experiments were performed on 10 rectangular blocks 450 mm high of fine-grained, soft limestone. One experiment simulated 21 cycles of bidirectional freezing (upward and downward) of an active layer above permafrost, and the other simulated 26 cycles of unidirectional freezing (downward) of a seasonally frozen bedrock in a non-permafrost region. Heave and settlement of the top of the blocks were monitored in relation to rock temperature and unfrozen water content, which ranged from almost dry to almost saturated. In the bidirectional freezing experiment, heave of the wettest block initially occurred abruptly at the onset of freezing periods and gradually during thawing periods (summer heave). After the crossing of a threshold marked by the appearance of a macrocrack in the upper layer of permafrost, summer heave increased by an order of magnitude as segregated ice accumulated incrementally in macrocracks, interrupted episodically by abrupt settlement that coincided with unusually high air temperatures. In the unidirectional freezing experiment, the wet blocks heaved during freezing periods and settled during thawing periods, whereas the driest blocks showed the opposite behaviour. The two wettest blocks settled progressively during the first 15 freeze-thaw cycles, before starting to heave progressively as macrocracks developed. Four processes, operating singly or in combination in the blocks account for their heave and settlement: (1) thermal expansion and contraction caused heave and settlement when little or no water-ice phase change was involved; (2) volumetric expansion of water freezing in situ caused short bursts of heave of the outer millimetres of wet rock; (3) ice segregation deeper in the blocks caused sustained heave during thawing and freezing periods; and (4) freeze-thaw cycling caused consolidation and settlement of wet blocks prior to macrocracking in the unidirectional freezing experiment. Rock fracture developed by growth of segregated ice in microcracks and macrocracks at depths determined by the freezing regime. Overall, the heave, settlement and fracture behaviour of the limestone is similar to that of frost-susceptible soil.

Evaluating permafrost thaw vulnerabilities and hydrologic impacts in boreal Alaska (USA) watersheds using field data and cryohydrogeologic modeling

NASA Astrophysics Data System (ADS)

Walvoord, M. A.; Voss, C.; Ebel, B. A.; Minsley, B. J.

2017-12-01

Permafrost environments undergo changes in hydraulic, thermal, chemical, and mechanical subsurface properties upon thaw. These property changes must be considered in addition to alterations in hydrologic, thermal, and topographic boundary conditions when evaluating shifts in the movement and storage of water in arctic and sub-arctic boreal regions. Advances have been made in the last several years with respect to multiscale geophysical characterization of the subsurface and coupled fluid and energy transport modeling of permafrost systems. Ongoing efforts are presented that integrate field data with cryohydrogeologic modeling to better understand and anticipate changes in subsurface water resources, fluxes, and flowpaths caused by climate warming and permafrost thawing. Analyses are based on field data from several sites in interior Alaska (USA) that span a broad north-south transition from continuous to discontinuous permafrost. These data include soil hydraulic and thermal properties and shallow permafrost distribution. The data guide coupled fluid and energy flow simulations that incorporate porewater liquid/ice phase change and the accompanying modifications in hydraulic and thermal subsurface properties. Simulations are designed to assess conditions conducive to active layer thickening and talik development, both of which are expected to affect groundwater storage and flow. Model results provide a framework for identifying factors that control the rates of permafrost thaw and associated hydrologic responses, which in turn influence the fate and transport of carbon.

Modeling the effects of fire severity and climate warming on active layer thickness and soil carbon storage of black spruce forests across the landscape in interior Alaska

Treesearch

H. Genet; A. D. McGuire; K. Barrett.; A. Breen; E. S. Euskirchen; J. F. Johnstone; E. S. Kasischke; A. M. Melvin; A. Bennett; M. C. Mack; T. S. Rupp; A. E. G. Schuur; M. R. M. R. Turetsky; F. Yuan

2013-01-01

There is a substantial amount of carbon stored in the permafrost soils of boreal forest ecosystems, where it is currently protected from decomposition. The surface organic horizons insulate the deeper soil from variations in atmospheric temperature. The removal of these insulating horizons through consumption by fire increases the vulnerability of permafrost to thaw,...

Monitoring Climate Variability and Change in Northern Alaska: Updates to the U.S. Geological Survey (USGS) Climate and Permafrost Monitoring Network

NASA Astrophysics Data System (ADS)

Urban, F. E.; Clow, G. D.; Meares, D. C.

2004-12-01

Observations of long-term climate and surficial geological processes are sparse in most of the Arctic, despite the fact that this region is highly sensitive to climate change. Instrumental networks that monitor the interplay of climatic variability and geological/cryospheric processes are a necessity for documenting and understanding climate change. Improvements to the spatial coverage and temporal scale of Arctic climate data are in progress. The USGS, in collaboration with The Bureau of Land Management (BLM) and The Fish and Wildlife Service (FWS) currently maintains two types of monitoring networks in northern Alaska: (1) A 15 site network of continuously operating active-layer and climate monitoring stations, and (2) a 21 element array of deep bore-holes in which the thermal state of deep permafrost is monitored. Here, we focus on the USGS Alaska Active Layer and Climate Monitoring Network (AK-CLIM). These 15 stations are deployed in longitudinal transects that span Alaska north of the Brooks Range, (11 in The National Petroleum Reserve Alaska, (NPRA), and 4 in The Arctic National Wildlife Refuge (ANWR)). An informative overview and update of the USGS AK-CLIM network is presented, including insight to current data, processing and analysis software, and plans for data telemetry. Data collection began in 1998 and parameters currently measured include air temperature, soil temperatures (5-120 cm), snow depth, incoming and reflected short-wave radiation, soil moisture (15 cm), wind speed and direction. Custom processing and analysis software has been written that calculates additional parameters such as active layer thaw depth, thawing-degree-days, albedo, cloudiness, and duration of seasonal snow cover. Data from selected AK-CLIM stations are now temporally sufficient to begin identifying trends, anomalies, and inter-annual variability in the climate of northern Alaska.

Determining hydrological changes in a small Arctic treeline basin using cold regions hydrological modelling and a pseudo-global warming approach

NASA Astrophysics Data System (ADS)

Krogh, S. A.; Pomeroy, J. W.

2017-12-01

Increasing temperatures are producing higher rainfall ratios, shorter snow-covered periods, permafrost thaw, more shrub coverage, more northerly treelines and greater interaction between groundwater and surface flow in Arctic basins. How these changes will impact the hydrology of the Arctic treeline environment represents a great challenge. To diagnose the future hydrology along the current Arctic treeline, a physically based cold regions model was used to simulate the hydrology of a small basin near Inuvik, Northwest Territories, Canada. The hydrological model includes hydrological processes such as snow redistribution and sublimation by wind, canopy interception of snow/rain and sublimation/evaporation, snowmelt energy balance, active layer freeze/thaw, infiltration into frozen and unfrozen soils, evapotranspiration, horizontal flow through organic terrain and snowpack, subsurface flow and streamflow routing. The model was driven with weather simulated by a high-resolution (4 km) numerical weather prediction model under two scenarios: (1) control run, using ERA-Interim boundary conditions (2001-2013) and (2) future, using a Pseudo-Global Warming (PGW) approach based on the RCP8.5 projections perturbing the control run. Transient changes in vegetation based on recent observations and ecological expectations were then used to re-parameterise the model. Historical hydrological simulations were validated against daily streamflow, snow water equivalent and active layer thickness records, showing the model's suitability in this environment. Strong annual warming ( 6 °C) and more precipitation ( 20%) were simulated by the PGW scenario, with winter precipitation and fall temperature showing the largest seasonal increase. The joint impact of climate and transient vegetation changes on snow accumulation and redistribution, evapotranspiration, active layer development, runoff generation and hydrograph characteristics are analyzed and discussed.

Preservation of labile organic matter in soils of drained thaw lakes in Northern Alaska

NASA Astrophysics Data System (ADS)

Mueller, Carsten W.; Rethemeyer, Janet; Kao-Kniffin, Jenny; Löppmann, Sebastian; Hinkel, Kenneth; Bockheim, James

2014-05-01

A large number of studies predict changing organic matter (OM) dynamics in arctic soils due to global warming. In contrast to rather slowly altering bulk soil properties, single soil organic matter (SOM) fractions can provide a more detailed picture of the dynamics of differently preserved SOM pools in climate sensitive arctic regions. By the study of the chemical composition of such distinctive SOM fractions using nuclear magnetic resonance spectroscopy (NMR) together with radiocarbon analyses it is possible to evaluate the stability of the major OM pools. Approximately 50-75% of Alaska's Arctic Coastal Plain is covered with thaw lakes and drained thaw lakes that follow a 5,000 yr cycle of development (between creation and final drainage), thus forming a natural soil chronosequence. The drained thaw lakes offer the possibility to study SOM dynamics affected by permafrost processes over millennial timescales. In April 2010 we sampled 16 soil cores (including the active and permanent layer) reaching from young drained lakes (0-50 years since drainage) to ancient drained lakes (3000-5500 years since drainage). Air dried soil samples from soil horizons of the active and permanent layer were subjected to density fractionation in order to differentiate particulate OM and mineral associated OM. The chemical composition of the SOM fractions was analyzed by 13C CPMAS NMR spectroscopy. For a soil core of a young and an ancient drained thaw lake basin we also analyzed the 14C content. For the studied soils we can show that up to over 25 kg OC per square meter are stored mostly as labile, easily degradable organic matter rich in carbohydrates. In contrast only 10 kg OC per square meter were sequestered as presumably more stable mineral associated OC dominated by aliphatic compounds. Comparable to soils of temperate regions, we found small POM (< 20 µm) occluded in aggregated soil structures which differed in the chemical composition from larger organic particles. This was clearly shown by increased amounts of aliphatic C in these small POM fractions. As revealed by 13C CPMAS NMR, with advancing soil age increasing aliphaticity was also detected in occluded small POM fractions. By 14C dating we could show the stabilization of younger more labile OM at greater depth in buried O horizons. Additionally the study of the microscale elemental distributions, using nano-scale secondary ion mass spectrometry (NanoSIMS) showed the initial formation of aggregates and organo-mineral interfaces in the studied permafrost soils.

Determination of glutation peroxidase and superoxide dismutase activities in canine seminal plasma and its relation with sperm quality and lipid peroxidation post thaw.

PubMed

Neagu, V R; García, B Macías; Rodríguez, A Morillo; Ferrusola, C Ortega; Bolaños, J M Gallardo; Fernández, L González; Tapia, J A; Peña, F J

2011-01-01

Lipid peroxidation (LPO) of dog spermatozoa was assessed in fresh semen and in samples of the same ejaculates after freezing and thawing. Particular attention was paid to individual differences in the susceptibility to LPO and its possible relationship with freezeability. Innate levels of LPO were low in fresh spermatozoa but increased after thawing in one of the dogs included in our study. The level of lipid peroxidation in fresh spermatozoa was not correlated with that of thawed spermatozoa. Negative correlations were detected between the activity in seminal plasma of GPx and sperm velocities post thaw (P < 0.01), however SOD activity was positively correlated with the percentage of linear motile sperm post thaw (P < 0.05). Copyright © 2011 Elsevier Inc. All rights reserved.

Permafrost thaw and climate warming may decrease the CO2, carbon, and metal concentration in peat soil waters of the Western Siberia Lowland.

PubMed

Raudina, T V; Loiko, S V; Lim, A; Manasypov, R M; Shirokova, L S; Istigechev, G I; Kuzmina, D M; Kulizhsky, S P; Vorobyev, S N; Pokrovsky, O S

2018-09-01

Soil pore waters are a vital component of the ecosystem as they are efficient tracers of mineral weathering, plant litter leaching, and nutrient uptake by vegetation. In the permafrost environment, maximal hydraulic connectivity and element transport from soils to rivers and lakes occurs via supra-permafrost flow (i.e. water, gases, suspended matter, and solutes migration over the permafrost table). To assess possible consequences of permafrost thaw and climate warming on carbon and Green House gases (GHG) dynamics we used a "substituting space for time" approach in the largest frozen peatland of the world. We sampled stagnant supra-permafrost (active layer) waters in peat columns of western Siberia Lowland (WSL) across substantial gradients of climate (-4.0 to -9.1°C mean annual temperature, 360 to 600mm annual precipitation), active layer thickness (ALT) (>300 to 40cm), and permafrost coverage (sporadic, discontinuous and continuous). We analyzed CO 2 , CH 4 , dissolved carbon, and major and trace elements (TE) in 93 soil pit samples corresponding to several typical micro landscapes constituting the WSL territory (peat mounds, hollows, and permafrost subsidences and depressions). We expected a decrease in intensity of DOC and TE mobilization from soil and vegetation litter to the supra-permafrost water with increasing permafrost coverage, decreasing annual temperature and ALT along a latitudinal transect from 62.3°N to 67.4°N. However, a number of solutes (DOC, CO 2 , alkaline earth metals, Si, trivalent and tetravalent hydrolysates, and micronutrients (Mn, Co, Ni, Cu, V, Mo) exhibited a northward increasing trend with highest concentrations within the continuous permafrost zone. Within the "substituting space for time" climate change scenario and northward shift of the permafrost boundary, our results suggest that CO 2 , DOC, and many major and trace elements will decrease their concentration in soil supra-permafrost waters at the boundary between thaw and frozen layers. As a result, export of DOC and elements from peat soil to lakes and rivers of the WSL (and further to the Arctic Ocean) may decrease. Copyright © 2018 Elsevier B.V. All rights reserved.

Thermal State Of Permafrost In Urban Environment Under Changing Climatic Conditions

NASA Astrophysics Data System (ADS)

Streletskiy, D. A.; Grebenets, V. I.; Kerimov, A. G.; Kurchatova, A.; Andruschenko, F.; Gubanov, A.

2015-12-01

Risks and damage, caused by deformation of building and constructions in cryolithozone, are growing for decades. Worsening of cryo-ecological situation and loss of engineering-geocryological safety are induced by both technogenic influences on frozen basement and climate change. In such towns on permafrost as Vorkuta, Dixon more than 60% of objects are deformed, in Yakutsk, Igarka- nearly 40%, in Norilsk, Talnakh, Mirnij 35%, in old indigenous villages - approximately 100%; more than 80% ground dams with frozen cores are in poor condition. This situation is accompanied by activation of dangerous cryogenic processes. For example in growing seasonally-thaw layer is strengthening frost heave of pipeline foundation: only on Yamburg gas condensate field (Taz Peninsula) are damaged by frost heave and cut or completely replaced 3000 - 5000 foundations of gas pipelines. Intensity of negative effects strongly depends on regional geocryology, technogenic loads and climatic trends, and in Arctic we see a temperature rise - warming, which cause permafrost temperature rise and thaw). In built areas heat loads are more diverse: cold foundations (under the buildings with ventilated cellars or near termosyphons) are close to warm areas with technogenic beddings (mainly sandy), that accumulate heat, close to underground collectors for communications, growing thaw zones around, close to storages of snows, etc. Note that towns create specific microclimate with higher air temperature. So towns are powerful technogenic (basically, thermal) presses, placed on permafrost; in cooperation with climate changes (air temperature rise, increase of precipitation) they cause permafrost degradation. The analysis of dozens of urban thermal fields, formed in variable cryological and soil conditions, showed, that nearly 70% have warming trend, 20% - cooling and in 10% of cases the situation after construction is stable. Triggered by warming of climate changes of vegetation, depth and temperature of seasonally thaw layer, summer precipitation regime and other natural parameters in combination with developing technogenesis require new strategy of the cryolithozone development.

Active layer hydrology in an arctic tundra ecosystem: quantifying water sources and cycling using water stable isotopes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Throckmorton, Heather M.; Newman, Brent D.; Heikoop, Jeffrey M.

Climate change and thawing permafrost in the Arctic will significantly alter landscape hydro-geomorphology and the distribution of soil moisture, which will have cascading effects on climate feedbacks (CO 2 and CH 4) and plant and microbial communities. Fundamental processes critical to predicting active layer hydrology are not well understood. This study applied water stable isotope techniques (δ 2H and δ 18O) to infer sources and mixing of active layer waters in a polygonal tundra landscape in Barrow, Alaska (USA), in August and September of 2012. Results suggested that winter precipitation did not contribute substantially to surface waters or subsurface activemore » layer pore waters measured in August and September. Summer rain was the main source of water to the active layer, with seasonal ice melt contributing to deeper pore waters later in the season. Surface water evaporation was evident in August from a characteristic isotopic fractionation slope (δ 2H vs δ 18O). Freeze-out isotopic fractionation effects in frozen active layer samples and textural permafrost were indistinguishable from evaporation fractionation, emphasizing the importance of considering the most likely processes in water isotope studies, in systems where both evaporation and freeze-out occur in close proximity. The fractionation observed in frozen active layer ice was not observed in liquid active layer pore waters. Such a discrepancy between frozen and liquid active layer samples suggests mixing of meltwater, likely due to slow melting of seasonal ice. In conclusion, this research provides insight into fundamental processes relating to sources and mixing of active layer waters, which should be considered in process-based fine-scale and intermediate-scale hydrologic models.« less

Active layer hydrology in an arctic tundra ecosystem: quantifying water sources and cycling using water stable isotopes

DOE PAGES

Throckmorton, Heather M.; Newman, Brent D.; Heikoop, Jeffrey M.; ...

2016-04-16

Climate change and thawing permafrost in the Arctic will significantly alter landscape hydro-geomorphology and the distribution of soil moisture, which will have cascading effects on climate feedbacks (CO 2 and CH 4) and plant and microbial communities. Fundamental processes critical to predicting active layer hydrology are not well understood. This study applied water stable isotope techniques (δ 2H and δ 18O) to infer sources and mixing of active layer waters in a polygonal tundra landscape in Barrow, Alaska (USA), in August and September of 2012. Results suggested that winter precipitation did not contribute substantially to surface waters or subsurface activemore » layer pore waters measured in August and September. Summer rain was the main source of water to the active layer, with seasonal ice melt contributing to deeper pore waters later in the season. Surface water evaporation was evident in August from a characteristic isotopic fractionation slope (δ 2H vs δ 18O). Freeze-out isotopic fractionation effects in frozen active layer samples and textural permafrost were indistinguishable from evaporation fractionation, emphasizing the importance of considering the most likely processes in water isotope studies, in systems where both evaporation and freeze-out occur in close proximity. The fractionation observed in frozen active layer ice was not observed in liquid active layer pore waters. Such a discrepancy between frozen and liquid active layer samples suggests mixing of meltwater, likely due to slow melting of seasonal ice. In conclusion, this research provides insight into fundamental processes relating to sources and mixing of active layer waters, which should be considered in process-based fine-scale and intermediate-scale hydrologic models.« less

Identifying active methane-oxidizers in thawed Arctic permafrost by proteomics

NASA Astrophysics Data System (ADS)

Lau, C. M.; Stackhouse, B. T.; Chourey, K.; Hettich, R. L.; Vishnivetskaya, T. A.; Pfiffner, S. M.; Layton, A. C.; Mykytczuk, N. C.; Whyte, L.; Onstott, T. C.

2012-12-01

The rate of CH4 release from thawing permafrost in the Arctic has been regarded as one of the determining factors on future global climate. It is uncertain how indigenous microorganisms would interact with such changing environmental conditions and hence their impact on the fate of carbon compounds that are sequestered in the cryosol. Multitudinous studies of pristine surface cryosol (top 5 cm) and microcosm experiments have provided growing evidence of effective methanotrophy. Cryosol samples corresponding to active layer were sampled from a sparsely vegetated, ice-wedge polygon at the McGill Arctic Research Station at Axel Heiberg Island, Nunavut, Canada (N79°24, W90°45) before the onset of annual thaw. Pyrosequencing of 16S rRNA gene indicated the occurrence of methanotroph-containing bacterial families as minor components (~5%) in pristine cryosol including Bradyrhizobiaceae, Methylobacteriaceae and Methylocystaceae within alpha-Proteobacteria, and Methylacidiphilaceae within Verrucomicrobia. The potential of methanotrophy is supported by preliminary analysis of metagenome data, which indicated putative methane monooxygenase gene sequences relating to Bradyrhizobium sp. and Pseudonocardia sp. are present. Proteome profiling in general yielded minute traces of proteins, which likely hints at dormant nature of the soil microbial consortia. The lack of specific protein database for permafrost posted additional challenge to protein identification. Only 35 proteins could be identified in the pristine cryosol and of which 60% belonged to Shewanella sp. Most of the identified proteins are known to be involved in energy metabolism or post-translational modification of proteins. Microcosms amended with sodium acetate exhibited a net methane consumption of ~65 ngC-CH4 per gram (fresh weight) of soil over 16 days of aerobic incubation at room temperature. The pH in microcosm materials remained acidic (decreased from initial 4.7 to 4.5). Protein extraction and characterization identified ~350 proteins, confirmed enhanced microbial activities and significant shift in community structure within the microcosms. Although the activity of Shewanella sp. was suppressed by the incubation conditions, other bacteria were activated. This was shown by at least 3-fold increase in the number of identified proteins, which were primarily players in cellular energy metabolism. Among them, Geobacter sp. and methane-oxidizers, Bradyrhizobium sp., Methylosinus sp. and Methylocystis sp. appear dominant. In order to advance the protein database for better biodiversity and functional identification, we are currently using duo extraction protocols and consolidating metagenome data obtained from the same soil samples. A depth profile (from active to permafrost layer) for methanotrophs is being determined by examining pristine cores, thawed cryosols as well as enrichment cultures. The proteome information from these samples will be presented, which will be complemented by molecular studies.

Intensification of freeze-thaw cycles in the soil on post-fire alpine slopes of Mount Shirouma-dake, northern Japanese Alps central Japan

NASA Astrophysics Data System (ADS)

Sasaki, A.; Suzuki, K.

2016-12-01

This is the continuous study to clarify the geo-environmental changes on the post-fire alpine slopes of Mount Shirouma-dake in the Northern Japanese Alps. The fire occurred at May 9, 2009 on the alpine slopes of Mount Shirouma-dake, and the fire spread to the Pinus pumila communities and grasslands. Although the grass had a little damage by the fire, the P. pumila received nearly impact of the fire. In the P. pumila communities where the leaf burnt, forest floor is exposed and become easy to be affected by atmospheric condition such as rain, wind, snow, and etc. First, we observed condition of the micro-landforms on post-fire slopes repeatedly for seventh years after the fire. As the results of the observation, it is clear that remarkable changes of these micro-landforms have not occurred but some litters on the forest-floor in the fired P. pumila communities are flushed out to surroundings. The litter layer on the forest-floor in the fired P. pumila communities were 3-4 cm thick in August of 2011, but it became 0.5 cm thick in September of 2014. The P. pumila communities established on the slopes consists of angular and sub-angular gravel with openwork texture, which are covered by thin soil layer. On July of 2016, the litter layer almost entirely flushed out and surface of soil layer is exposed to atmosphere. In addition, we observe the ground temperature and soil moisture, under the fired P. pumila communities and the no fired P. pumila communities since October 2009, to find influence of the fire. The ground temperature sensors were installed into at 1 cm, 10 cm, and 40 cm depth. The soil moisture sensors were installed into at 1 cm and 10 cm depth. The 1 cm depth of the soil on the post-fire slopes, several times of diurnal freeze-thaw cycles occurred on October and November since 2011, but it had not occurred in 2009 and 2010. In particular, more than 20 times of diurnal freeze-thaw cycles occurred on freezing period of 2014. The diurnal freeze-thaw cycles continue to be increasing until thawing period of 2016. The period of seasonal frost at 10 cm and 40 cm depth on the post-fire slopes are extended for two weeks. Snowmelt water is especially thought to be act on re-freezing of post-fire slopes on thawing period. These thermal condition changes are triggered by decrease in the thickness of the litter layer on the fired P. pumila communities.

Microtopographic and depth controls on active layer chemistry in Arctic polygonal ground

DOE PAGES

Newman, Brent D.; Throckmorton, Heather M.; Graham, David E.; ...

2015-03-24

Polygonal ground is a signature characteristic of Arctic lowlands, and carbon release from permafrost thaw can alter feedbacks to Arctic ecosystems and climate. This study describes the first comprehensive spatial examination of active layer biogeochemistry that extends across high- and low-centered, ice wedge polygons, their features, and with depth. Water chemistry measurements of 54 analytes were made on surface and active layer pore waters collected near Barrow, Alaska, USA. Significant differences were observed between high- and low-centered polygons suggesting that polygon types may be useful for landscape-scale geochemical classification. However, differences were found for polygon features (centers and troughs) formore » analytes that were not significant for polygon type, suggesting that finer-scale features affect biogeochemistry differently from polygon types. Depth variations were also significant, demonstrating important multidimensional aspects of polygonal ground biogeochemistry. These results have major implications for understanding how polygonal ground ecosystems function, and how they may respond to future change.« less

Two year soil moisture and temperature monitoring from two vegetation communities on olivine-basalt soils from Coppermine Peninsula, Maritime Antarctica

NASA Astrophysics Data System (ADS)

Schaefer, Carlos; Thomazini, André; Michel, Roberto; Francelino, Márcio; Pereira, Antônio; Schünemann, Adriano; Mendonça, Eduardo Sá

2017-04-01

Current climate change is greatly affecting terrestrial ecosystems of Maritime Antarctica, especially due the variations in soil temperature and moisture content. The vegetation species distribution in Maritime Antarctica is highly heterogeneous on the landscape, being governed mainly by water regime and soil characteristics. Hence, the objective of this study was to evaluate soil temperature and moisture based on long-term in situ measurements from two well-developed vegetation communities in Coppermine Peninsula, Robert Island, Maritime Antarctica. The moss site (S1) is located in a marine terrace, highly influenced by ice/snow/permafrost melting (20 m a.s.l) not affected by permafrost. This site represents the most extensive moss carpet in Coppermine Peninsula, mainly constituted by Sanionia uncinata (Hedw.) Loeske, forming a dense carpet of 3-7 cm thickness. The moss/lichen site (S2) is located in an elevated area on basaltic ridge (29 m a.s.l.). The site has great influence of permafrost bellow the A horizon of the soil, at 50 cm depth. Vegetation species constitution is highly variable, with a significant occurrence of Polytrichastrum alpinum G.L. Smith. Musiccolas lichens populations of Psoroma cinnamomeum Malme, Ochrolechia frigida (Sw.). The monitoring systems consist of soil temperature probes (Campbell L107E thermocouple, accuracy of ± 0.2°C) and soil moisture probes (CS656 water content reflectometer, accuracy of ± 2.5%), placed in the active layer at 0-10 cm depths. Three probes were inserted at each site in triplicates, spaced at 2 m from each other. All probes were connected to a Campbell Scientific CR 1000 data logger, recording data at every 1 hour interval. We calculated the thawing days (TD), freezing days (FD); thawing degree days (TDD) and freezing degree days (FDD); all according to Guglielmin et al. (2008). This system recorded data of soil temperature and moisture from February 2014 to February 2016. A predominance of freezing conditions was observed to occur in S1 with only 1 thaw day in the studied period (23 thawed degree days, -1400 freeze degree days), whilst thawed days occur in January, February and March in S2 (118 thawed degree days, -1107 freeze degree days). Almeida et al (2014) attributed the thermal buffering effect under mosses primarily to higher moisture onsite, but recognized the possible contribution of a longer duration of the snowpack. Soil moisture presented less variation compared to values of soil temperature along the monitored period, hourly records show average soil moisture of 0.18 m3 m-3 (0.52 max, 0.09 min) and 0.11 m3 m-3 (0.38 max, 0.04 min) at S1 and S2, respectively. S1 presented a more pronounced buffering effect due to its position in the landscape where thawing of surrounding active layer continuously supply water, providing conditions for a thicker vegetation cover, On the other hand, the moss/lichen site is located in the middle of the slope, where drainage is facilitated.

In-situ Geotechnical Investigation of Arctic Nearshore Zone Sediments, Herschel Island, Yukon

NASA Astrophysics Data System (ADS)

Stark, N.; Quinn, B.; Radosavljevic, B.; Lantuit, H.

2016-02-01

The Arctic is currently undergoing rapid changes with regard to ice coverage, permafrost retreat and coastal erosion. In addition to hydrodynamic processes, the sediments in the Arctic nearshore zone are affected by potential variations in freeze-thaw cycles, as well as an increase of abundant suspended sediment introduced by active retrogressive thaw slumps and increased river discharge. During the YUKON14 expedition to Herschel Island, Yukon, in-situ geotechnical testing of nearshore zone sediments was conducted using a portable free fall penetrometer. The research goals were mapping of sediment types, identification of surficial sediment stratification related to recent sediment remobilization or deposition processes, and the investigation of the soil mechanical characteristics of the uppermost seabed surface in the nearshore zone. Approximately 200 sites were tested using the portable free fall penetrometer, and five different geotechnical signatures identified and grouped. Most locations were characterized by a soft sediment top layer that exhibited a noticeably lower sediment strength than the underlying sediment. The results were correlated to existing sediment grain size records and a sediment type interpretation based on side scan sonar backscatter information. Strong spatial variations in sediment type and stiffness were observed, as well as in abundance and thickness of a top layer of very soft and loose sediment. It was attempted to relate the geotechnical signature to site-specific hydrodynamic energy, morphology, and vicinity to thaw slumps. The results will contribute to a detailed investigation of Arctic coastal erosion in the region, and the investigation of the role of geotechnical parameters for Arctic coastal erosion.

Impact of downslope soil transport on carbon storage and fate in permafrost dominated landscapes

NASA Astrophysics Data System (ADS)

Shelef, E.; Rowland, J. C.; Wilson, C. J.; Altmann, G.; Hilley, G. E.

2014-12-01

A large fraction of high latitude permafrost-dominated landscapes are covered by soil mantled hillslopes. In these landscapes, soil organic carbon (SOC) accumulates and is lost through lateral transport processes. At present, these processes are not included in regional or global landsurface climate models. We present preliminary results of a soil transport and storage model over a permafrost dominated hillslope. In this model soil carbon is transported downslope within a mobile layer that thaws every summer. The model tracks soil transport and its subsequent storage at the hillslope's base. In a scenario where a carbon poor subsurface is blanketed by a carbon-rich surface layer, the progressive downslope soil transport can result in net carbon sequestration. This sequestration occurs because SOC is carried from the hilllsope's near-surface layer, where it is produced by plants and is capable of decomposing, into depositional sites at the hillslope's base where it is stored in frozen deposits such that it's decomposition rate is effectively zero. We use the model to evaluate the quantities of carbon stored in depositional settings during the Holocene, and to predict changes in sequestration rate in response to thaw depth thickening expected to occur within the next century due to climate-change. At the Holocene time scale, we show that a large amount of SOC is likely stored in depositional sites that comprise only a small fraction of arctic landscapes. The convergent topography of these sites makes them susceptible to fluvial erosion and suggests that increased fluvial incision in response to climate-change-induced thawing has the potential to release significant amounts of carbon to the river system, and potentially to the atmosphere. At the time scale of the next century, increased thaw depth may increase soil-transport rates on hillslopes and therefore increase SOC sequestration rates at a magnitude that may partly compensate for the carbon release expected from permafrost thawing. Model guided field data collection is essential to reduce the uncertainty of these estimates.

Two-Dimensional Modeling of Heat and Moisture Dynamics in Swedish Roads: Model Set up and Parameter Sensitivity

NASA Astrophysics Data System (ADS)

Rasul, H.; Wu, M.; Olofsson, B.

2017-12-01

Modelling moisture and heat changes in road layers is very important to understand road hydrology and for better construction and maintenance of roads in a sustainable manner. In cold regions due to the freezing/thawing process in the partially saturated material of roads, the modeling task will become more complicated than simple model of flow through porous media without freezing/thawing pores considerations. This study is presenting a 2-D model simulation for a section of highway with considering freezing/thawing and vapor changes. Partial deferential equations (PDEs) are used in formulation of the model. Parameters are optimized from modelling results based on the measured data from test station on E18 highway near Stockholm. Impacts of phase change considerations in the modelling are assessed by comparing the modeled soil moisture with TDR-measured data. The results show that the model can be used for prediction of water and ice content in different layers of the road and at different seasons. Parameter sensitivities are analyzed by implementing a calibration strategy. In addition, the phase change consideration is evaluated in the modeling process, by comparing the PDE model with another model without considerations of freezing/thawing in roads. The PDE model shows high potential in understanding the moisture dynamics in the road system.

Coastal Permafrost Bluff Response to Summer Warming, Barter Island, NE Alaska

NASA Astrophysics Data System (ADS)

Richmond, B. M.; Gibbs, A.; Johnson, C. D.; Swarzenski, P. W.; Oberle, F. J.; Tulaczyk, S. M.; Lorenson, T. D.

2016-12-01

Observations of warming air and sea temperatures in the Arctic are leading to longer periods of permafrost thaw and ice-free conditions during summer, which lead to increased exposure to coastal storm surge, wave impacts, and heightened erosion. Recently collected air and soil (bluff) temperatures, atmospheric pressure, water levels, time-lapse photography, aerial photography and satellite imagery, and electrical resistivity tomography (ERT) surveys were used to document coastal bluff morphological response to seasonal warming. Data collection instruments and time-lapse cameras installed overlooking a bluff face on the exposed open ocean coast and within an erosional gully were used to create an archive of hourly air temperature, pressure, bluff morphology, and sea-state conditions allowing for documentation of individual bluff failure events and coincident meteorology. Permafrost boreholes as deep as 6 m from the upper bluff tundra surface were fitted with thermistor arrays to record a high resolution temperature record that spanned an initial frozen state, a summer thaw cycle, and subsequent re-freezing. Late summer ERT surveys were used to link temperature observations to subsurface electrical resistivities and active-layer dynamics. Preliminary observations suggest surface warming and active layer growth are responsible for a significant amount of bluff face failures that are exacerbated in the shore perpendicular gullies and along the exposed ocean coast. Electrical resistivity surveys and geochemical data reveal concentrated brines at depth, which likely contribute to enhanced, localized erosion in weakened strata.

Effect of Thaw Depth on Fluxes of CO2 and CH4 in Manipulated Arctic Coastal Tundra of Barrow, Alaska

NASA Astrophysics Data System (ADS)

Kim, Y.

2014-12-01

Changes in CO2 and CH4 emissions represent one of the most significant consequences of drastic climate change in the Arctic, by way of thawing permafrost, a deepened active layer, and decline of thermokarst lakes in the Arctic. This study conducted flux-measurements of CO2 and CH4, as well as environmental factors such as temperature, moisture, and thaw depth, as part of a water table manipulation experiment in the Arctic coastal plain tundra of Barrow, Alaska during autumn. The manipulation treatment consisted of draining, controlling, and flooding treated sections by adjusting standing water. Inundation increased CH4 emission by a factor of 4.3 compared to non-flooded sections. This may be due to the decomposition of organic matter under a limited oxygen environment by saturated standing water. On the other hand, CO2 emission in the dry section was 3.9-fold higher than in others. CH4 emission tends to increase with deeper thaw depth, which strongly depends on the water table; however, CO2 emission is not related to thaw depth. Quotients of global warming potential (GWPCO2) (dry/control) and GWPCH4 (wet/control) increased by 464 and 148 %, respectively, and GWPCH4 (dry/control) declined by 66 %. This suggests that CO2 emission in a drained section is enhanced by soil and ecosystem respiration, and CH4 emission in a flooded area is likely stimulated under an anoxic environment by inundated standing water. The findings of this manipulation experiment during the autumn period demonstrate the different production processes of CO2 and CH4, as well as different global warming potentials, coupled with change in thaw depth. Thus the outcomes imply that the expansion of tundra lakes leads the enhancement of CH4 release, and the disappearance of the lakes causes the stimulated CO2 production in response to the Arctic climate change.

Thaw depth spatial and temporal variability at the Limnopolar Lake CALM-S site, Byers Peninsula, Livingston Island, Antarctica.

PubMed

de Pablo, M A; Ramos, M; Molina, A; Prieto, M

2018-02-15

A new Circumpolar Active Layer Monitoring (CALM) site was established in 2009 at the Limnopolar Lake watershed in Byers Peninsula, Livingston Island, Antarctica, to provide a node in the western Antarctic Peninsula, one of the regions that recorded the highest air temperature increase in the planet during the last decades. The first detailed analysis of the temporal and spatial evolution of the thaw depth at the Limnopolar Lake CALM-S site is presented here, after eight years of monitoring. The average values range between 48 and 29cm, decreasing at a ratio of 16cm/decade. The annual thaw depth observations in the 100×100 m CALM grid are variable (Variability Index of 34 to 51%), although both the Variance Coefficient and the Climate Matrix Analysis Residual point to the internal consistency of the data. Those differences could be explained then by the terrain complexity and node-specific variability due to the ground properties. The interannual variability was about 60% during 2009-2012, increasing to 124% due to the presence of snow in 2013, 2015 and 2016. The snow has been proposed here as one of the most important factors controlling the spatial variability of ground thaw depth, since its values correlate with the snow thickness but also with the ground surface temperature and unconfined compression resistance, as measured in 2010. The topography explains the thaw depth spatial distribution pattern, being related to snowmelt water and its accumulation in low-elevation areas (downslope-flow). Patterned grounds and other surface features correlate well with high thaw depth patterns as well. The edaphic factor (E=0.05842m 2 /°C·day; R 2 =0.63) is in agreement with other permafrost environments, since frozen index (F>0.67) and MAAT (<-2°C) denote a continuous permafrost existence in the area. All these characteristics provided the basis for further comparative analyses between others nearby CALM sites. Copyright © 2017 Elsevier B.V. All rights reserved.

Microbial Insights into Shifting Methane Production Potential in Thawing Permafrost

NASA Astrophysics Data System (ADS)

Crossen, K.; Wilson, R.; Raab, N.; Neumann, R.; Chanton, J.; Saleska, S. R.; Rich, V. I.

2017-12-01

Permafrost, which stores 50% of global soil carbon, is thawing rapidly due to climate change, and resident microbes are contributing to changing carbon gas emissions. Predictions of the fate of carbon in these regions is poorly constrained; however, improved, careful mapping of microbial community members influencing CO2 and CH4 emissions will help clarify the system response to continued change. In order to more fully understand connections between the microbial communities, major geochemical transformations, and CO2 and CH4 emissions, peat cores were collected from the active layers of three permafrost habitats spanning a thaw gradient (collapsed palsa, bog, and fen) at Stordalen Mire, Abisko, Sweden. Anaerobic incubations of shallow and deep subsamples from these sites were performed, with time-course characterization of the changes in microbial communities, peat geochemistry, and carbon gas production. The latter were profiled with 16S rRNA amplicon sequencing, and targeted metagenomes. The communities within each habitat and depth were statistically distinct, and changed significantly over the course of the incubations. Acidobacteria was consistently the dominant bacterial phylum in all three habitat types. With increased thaw, the relative abundance of Actinobacteria tended to decrease, while Chloroflexi and Bacteroidetes increased with thaw. The relative abundance of methanogens increased with thaw and with depth within each habitat. Over time in the incubations, the richness of the communities tended to decrease. Homoacetogenesis (CO2 + H2 -> CH3COOH) has been documented in other peatlands, and homoacetogens can influence CH4 production by interacting with methanogens, competing with hydrogenotrophs while providing substrate for acetoclasts. Modelling of microbial reaction networks suggests potential for highest homoacetogenesis rates in the collapsed palsa, which also contains the highest relative abundances of lineages taxonomically affiliated with known homoacetogens. We are working to link changes in the relative abundances of specific, differentiating lineages with observed geochemical transformations and measured carbon gas production. This work will increase our knowledge of factors influencing greenhouse gas emissions from this climatically important habitat.

Cryopreservation and gel collagen culture of porcine hepatocytes

PubMed Central

Liu, Hong-Ling; Wang, Ying-Jie; Guo, Hai-Tao; Wang, Yu-Ming; Liu, Jun; Yu, Yue-Cheng

2004-01-01

AIM: To study the method of cryopreserving porcine hepatocytes and gel collagen culture measure after its cryopreservation. METHODS: Hepatocytes, isolated from Chinese experimental suckling mini-pigs by two-step perfusion with collagenase using an extra corporeal perfusion apparatus, were cryopreserved with 50 mL/L to 200 mL/L DMSO in liquid nitrogen for 4 mo, then thawed and seeded in 1 or between 2 layers of gel collagen. The expression of porcine albumin message RNA, cellular morphology and content of aspartate aminotransferase (AST) and urea nitrogen (UN) were examined during culture in gel. RESULTS: Viability of 150 mL/L DMSO group thawed hepatocytes was (83 ± 4)%, but after purification, its viability was (90 ± 5)%, attachment efficiency was (86 ± 7)%, the viability of thawed hepatocytes was near to fresh cells. When the thawed hepatocytes were cultivated in gel collagen with culture medium adding epidermal growth factor, the hepatocytes grew in various administrative levels in mixed collagen gel, and bunchy in the sandwich configuration cultures. For up to 10 days’ culture, the typical cellular morphological characteristics of cultivated hepatocytes could be observed. The leakage of AST was lower during culture in gel than that in common culture. At the same time, the UN synthesized by cells cultivated in mixed gel collagen was higher than that in other groups. CONCLUSION: Storage in liquid nitrogen can long keep hepatocytes’ activities, the concentration of 150 mL/L DMSO is fit for porcine hepatocytes’ cryopreservation. Thawed hepatocytes can be cultivated with collagenous matrix, which provides an environment that more closely resembles that in vivo and maintain the expression of certain liver-specific function of hepatocytes. PMID:15052684

Shifts of methanogenic communities in response to permafrost thaw results in rising methane emissions and soil property changes.

PubMed

Wei, Shiping; Cui, Hongpeng; Zhu, Youhai; Lu, Zhenquan; Pang, Shouji; Zhang, Shuai; Dong, Hailiang; Su, Xin

2018-05-01

Permafrost thaw can bring negative consequences in terms of ecosystems, resulting in permafrost collapse, waterlogging, thermokarst lake development, and species composition changes. Little is known about how permafrost thaw influences microbial community shifts and their activities. Here, we show that the dominant archaeal community shifts from Methanomicrobiales to Methanosarcinales in response to the permafrost thaw, and the increase in methane emission is found to be associated with the methanogenic archaea, which rapidly bloom with nearly tenfold increase in total number. The mcrA gene clone libraries analyses indicate that Methanocellales/Rice Cluster I was predominant both in the original permafrost and in the thawed permafrost. However, only species belonging to Methanosarcinales showed higher transcriptional activities in the thawed permafrost, indicating a shift of methanogens from hydrogenotrophic to partly acetoclastic methane-generating metabolic processes. In addition, data also show the soil texture and features change as a result of microbial reproduction and activity induced by this permafrost thaw. Those data indicate that microbial ecology under warming permafrost has potential impacts on ecosystem and methane emissions.

Long Term Thawing Experiments on Intact Cores of Arctic Mineral Cryosol: Implications for Greenhouse Gas Feedbacks from Global Warming

NASA Astrophysics Data System (ADS)

Onstott, T. C.; Stackhouse, B. T.; Lau, C. Y. M.; Whyte, L. G.; Pfiffner, S. M.; Vishnivetskaya, T. A.

2015-12-01

Mineral cryosols comprise >87% of Arctic tundra. Much attention has focused on high-organic carbon cryosols and how they will respond to global warming. The biogeochemical processes related to the greenhouse gas release from mineral cryosols, however, have not been fully explored. To this end, seventeen intact cores of active layer and underlying permafrost of mineral cryosol from Axel Heiberg Island, Nunavut, Canada, were subjected to 85 weeks of thawing at 4.5°C under various treatment regimes. The fluxes of CO2 and CH4 across the atmosphere-soil boundary and vertical profiles of the gas and water chemistry and the metagenomes were determined. The flux measurements were compared to those of microcosms and field measurements. The main conclusions were as follows: 1) CO2 emission rates from the intact cores do not behave in the typical fast to slow carbon pool fashion that typify microcosm experiments. The CO2 emission rates from the intact cores were much slower than those from the microcosm initially, but steadily increased with time, overtaking and then exceeding microcosm release rates after one year. 2) The increased CO2 flux from thawing permafrost could not be distinguished from that of control cores until after a full year of thawing. 3) Atmospheric CH4 oxidation was present in all intact cores regardless of whether they are water saturated or not, but after one year it had diminished to the point of being negligible. Over that same time the period the metagenomic data recorded a significant decline in the proportion of high-affinity methanotrophs. 4) Thaw slumps in the cores temporarily increased the CH4 oxidation and the CO2 emission rates. 5) The microbial community structures varied significantly by depth with methanotrophs being more abundant in above 35 cm depth than below 35 cm depth. 6) Other than the diminishment of Type II methanotrophs, the microbial community structure varied little after one week of thawing, nor even after 18 months of thaw.

SLAPex Freeze/Thaw 2015: The First Dedicated Soil Freeze/Thaw Airborne Campaign

NASA Technical Reports Server (NTRS)

Kim, Edward; Wu, Albert; DeMarco, Eugenia; Powers, Jarrett; Berg, Aaron; Rowlandson, Tracy; Freeman, Jacqueline; Gottfried, Kurt; Toose, Peter; Roy, Alexandre;

Thermal preconditioning of mountain permafrost towards instability

NASA Astrophysics Data System (ADS)

Hauck, Christian; Etzelmüller, Bernd; Hilbich, Christin; Isaksen, Ketil; Mollaret, Coline; Pellet, Cécile; Westermann, Sebastian

2017-04-01

Warming permafrost has been detected worldwide in recent years and is projected to continue during the next century as shown in many modelling studies from the polar and mountain regions. In mountain regions, this can lead to potentially hazardous impacts on short time-scales by an increased tendency for slope instabilities. However, the time scale of permafrost thaw and the role of the ice content for determining the strength and rate of permafrost warming and degradation (= development of talik) are still unclear, especially in highly heterogeneous terrain. Observations of permafrost temperatures near the freezing point show complex inter-annual responses to climate forcing due to latent heat effects during thawing and the influence of the snow-cover, which is formed and modulated by highly non-linear processes itself. These effects are complicated by 3-dimensional hydrological processes and interactions between snow melt, infiltration and drainage which may also play an important role in the triggering of mass movements in steep permafrost slopes. In this contribution we demonstrate for the first time a preconditioning effect within near-surface layers in mountain permafrost that causes non-linear degradation and accelerates permafrost thaw. We hypothesise that an extreme regional or global temperature anomaly, such as the Central European summers 2003 and 2015 or the Northern European summers 2006 and 2014, will enhance permafrost degradation if the active layer and the top of the permafrost layer are already preconditioned, i.e. have reduced latent heat content. This preconditioning can already be effectuated by a singular warm year, leading to exceptionally strong melting of the ground ice in the near-surface layers. On sloping terrain and in a context of quasi-continuous atmospheric warming, this ice-loss can be considered as irreversible, as a large part of the melted water will drain/evaporate during the process, and the build-up of an equivalent amount of ice in following cold years does not happen on similar time-scales as the melting. Joint thermal and geophysical observations from permafrost sites in the Swiss Alps and Scandinavia suggest that the above process applies mostly to sites with low to intermediate ice contents, where singular anomalies can lead to sustained ice loss even at larger depths.

Pre-selection by double layer density gradient centrifugation improves the fertilising capacity of frozen-thawed, capacitated stallion sperm.

PubMed

Morató, Roser; Soares, Juleide M De Souza; Orero, Guifré; Mogas, Teresa; Miró, Jordi

2013-06-01

The effect of combining double layer density gradient centrifugation (DL-DGC) with different capacitation treatments on the fertilising capacity of frozen-thawed stallion sperm was examined via a heterologous assay involving in vitro-matured, zona pellucida-free bovine oocytes. In a first experiment, aliquots of frozen-thawed stallion sperm were subjected to one of five capacitation treatments without DL-DGC - ionomycin at 1.0μM, 0.1μM, 0.05μM or 0.01μM, or caffeine at 200μg/mL. The fertilising capacity of the semen was then assessed at 18h by staining the above oocytes with 4,6-diamidino-2-phenylindole (DAPI) and examining for sperm penetration, the number of penetrated spermatozoa per oocyte, and male pronucleus formation. In a second experiment, aliquots of frozen-thawed stallion sperm were subjected to DL-DGC selection - or not - and then further subjected to the two best capacitation treatments (0.1μM and 0.05μM ionomycin). The fertilising capacity of the semen was then determined as above. The DL-DGC/capacitated sperm samples showed the highest mean penetration rates: 24.16% following capacitation with 0.1μM ionomycin, and 12.21% following capacitation with 0.05μM ionomycin. The capacitated but non-DL-DGC-selected sperm returned significantly lower values: 6.26% and 7.02% for the same ionomycin treatments respectively. These findings suggest that combining DL-DGC selection with ionomycin capacitation improves the fertilising capacity of frozen-thawed stallion sperm. Copyright © 2013 Elsevier B.V. All rights reserved.

Influence of freezing down to 77.15 K on structure and antioxidant power of some proteins

NASA Astrophysics Data System (ADS)

Rozanova, S. L.; Narozhnyi, S. V.; Nardid, O. A.

2017-06-01

The purpose of the present work was to investigate influence of different freeze-thawing protocols on structure and antioxidant properties of isolated proteins. In our experiments we have studied human serum albumin, human hemoglobin and cytochrome C derived from equine heart frozen down to 77.15 K with 1-2 deg/min and 300 deg/min rate with following thawing on a water bath at 293.15 K. Native proteins were assumed as a control. Influence of freeze-thawing protocols on protein structure was investigated using spectrophotometric and fluorescent assays. Antioxidant activities of isolated proteins were estimated by their ability to reduce ABTS+ radical. It has been established that unfolding derived from freeze-thawing exposure leads to protein antioxidant activity increasing while decreasing of such an activity may be connected with macromolecule aggregation. Character of freeze-thawing influence on antioxidant activity of proteins depends on molecule structure peculiarities and freezing protocols.

Permafrost conditions at the Upper Kuskokwim river area and its influence on local communities.

NASA Astrophysics Data System (ADS)

Kholodov, A. L.; Panda, S. K.; Hanson, T.

2017-12-01

Research area located within the zone of discontinuous permafrost distribution. Recent mean annual air temperature here is close to the 0C. It means, that taking in consideration warming influence of the snow cower during winter, mean annual temperature at the ground surface is well above freezing point. It means that presence or absence of permafrost here completely controlled by the ecological conditions. Based on remote sensing data and the surveys conducted in 2016-17 we selected 6 main ecotypes typical for this area: black spruce boreal forest, wetlands, low and tall shrubs, deciduous and mixed forest. Most of them (low shrubs, deciduous and mixed forest) represent different stages of area recovering after forest fires that was confirmed by the presence of ashy layer close to ground surface in soil pits had been dug within these landscapes. Permafrost was observed only within 2 of them: low shrubs and black spruce boreal forest. Within these types of terrain temperature at the bottom of active layer varies from -0.2/-0.5C at the areas of low shrubs, recovered after relatively recent (approximately 30-50 years old) fires to -1/-1.5 within black spruce forest. Active (seasonally thawed) layer as thick as 0.6 to 0.8 m. Warmest ecotypes for the area are tall shrubs and deciduous forest, temperature at the depth close to 1 m is about +3C. At the mixed forest temperature at the same depth consists of +1/+2C. Active (seasonally frozen) layer thickness within permafrost free areas is 1-1.5 m at the drained sites and about 0.5 within wetlands. Ice-rich permafrost underlying the active layer was noticed only within the black spruce forest. Areas which are free of permafrost are much better drained, typical moisture of mineral soil is less than 30% versus 45-50% in seasonally thawed layer. The current state of permafrost and the fact that it presence completely depends on ecosystems limits land use abilities of local inhabitants. Any changes of forest coverage or organic layer thickness will lead to permafrost degradation and initiate thermokarst process or dryness of the area that increases risk of wild fires. Also, shallow soil freezing within wetlands makes shorter the safe period of snow machines operation. Current research should help local communities make more informed decisions in adaptation of resources management and land use.

The carbon cycle implications of chemical weathering in retrogressive thaw slump-impacted streams

NASA Astrophysics Data System (ADS)

Zolkos, S.; Tank, S. E.; Kokelj, S. V.

2016-12-01

Permafrost thaw is "unlocking" and exposing significant amounts of sediment, solutes and organic carbon previously maintained in frozen soils to biochemical processing and fluvial transport. While microbial respiration of permafrost organic carbon contributes significantly to CO2 in Arctic headwater streams, chemical weathering of minerals unearthed by thawing permafrost may fix CO2 as bicarbonate (HCO3), thus removing it from the active carbon cycle. However, the degree to which mineral weathering acts to temper CO2 generated during permafrost thaw is largely unknown. During summer 2015, we investigated these dynamics in eight streams (orders 1-3) impacted by retrogressive thaw slumps across the Peel Plateau (NT, Canada), where thaw slumps expose permafrost that is comprised of abundant glacial tills, and glaciofluvial and glaciolacustrine sediments. Thaw slump activity had a discernible signature in all streams: conductivity, pH, dissolved inorgnaic carbon (DIC), and solute concentrations (Ca, Mg, Na, K, SO4, Cl) increased in the downstream (thaw slump-impacted) reach, relative to upstream, while CO2 decreased. This corresponded with an isotopically-enriched DIC pool in impacted streams (mean δ13CDIC = -9.80‰), perhaps indicating the dissolution of carbonate minerals following exposure by thaw slump activity. Despite a general decrease downstream of thaw slumps, CO2 remained supersaturated in impacted streams (mean pCO2 = 915 µatm). However, the highest partial pressures of CO2 were found in thaw slump runoff (mean pCO2 = 4,600 µatm), above the point where runoff entered downstream systems. High pCO2 levels in slump runoff may be derived from microbial respiration of slump-released dissolved organic carbon or, for some slumps, carbonate dissolution (range δ13CDIC = 0.67 - -23.37‰). While this work suggests thaw slumps in the Western Canadian Arctic may act to partially temper CO2 in headwater streams, these stream networks will likely persist as significant sources of CO2 to the atmosphere.

Influences and interactions of inundation, peat, and snow on active layer thickness: Modeling Archive

DOE Data Explorer

Scott Painter; Ethan Coon; Cathy Wilson; Dylan Harp; Adam Atchley

2016-04-21

This Modeling Archive is in support of an NGEE Arctic publication currently in review [4/2016]. The Advanced Terrestrial Simulator (ATS) was used to simulate thermal hydrological conditions across varied environmental conditions for an ensemble of 1D models of Arctic permafrost. The thickness of organic soil is varied from 2 to 40cm, snow depth is varied from approximately 0 to 1.2 meters, water table depth was varied from -51cm below the soil surface to 31 cm above the soil surface. A total of 15,960 ensemble members are included. Data produced includes the third and fourth simulation year: active layer thickness, time of deepest thaw depth, temperature of the unfrozen soil, and unfrozen liquid saturation, for each ensemble member. Input files used to run the ensemble are also included.

Vertical distribution of bacterial community is associated with the degree of soil organic matter decomposition in the active layer of moist acidic tundra.

PubMed

Kim, Hye Min; Lee, Min Jin; Jung, Ji Young; Hwang, Chung Yeon; Kim, Mincheol; Ro, Hee-Myong; Chun, Jongsik; Lee, Yoo Kyung

2016-11-01

The increasing temperature in Arctic tundra deepens the active layer, which is the upper layer of permafrost soil that experiences repeated thawing and freezing. The increasing of soil temperature and the deepening of active layer seem to affect soil microbial communities. Therefore, information on soil microbial communities at various soil depths is essential to understand their potential responses to climate change in the active layer soil. We investigated the community structure of soil bacteria in the active layer from moist acidic tundra in Council, Alaska. We also interpreted their relationship with some relevant soil physicochemical characteristics along soil depth with a fine scale (5 cm depth interval). The bacterial community structure was found to change along soil depth. The relative abundances of Acidobacteria, Gammaproteobacteria, Planctomycetes, and candidate phylum WPS-2 rapidly decreased with soil depth, while those of Bacteroidetes, Chloroflexi, Gemmatimonadetes, and candidate AD3 rapidly increased. A structural shift was also found in the soil bacterial communities around 20 cm depth, where two organic (upper Oi and lower Oa) horizons are subdivided. The quality and the decomposition degree of organic matter might have influenced the bacterial community structure. Besides the organic matter quality, the vertical distribution of bacterial communities was also found to be related to soil pH and total phosphorus content. This study showed the vertical change of bacterial community in the active layer with a fine scale resolution and the possible influence of the quality of soil organic matter on shaping bacterial community structure.

Bacterial community structure across environmental gradients in permafrost thaw ponds: methanotroph-rich ecosystems

PubMed Central

Crevecoeur, Sophie; Vincent, Warwick F.; Comte, Jérôme; Lovejoy, Connie

2015-01-01

Permafrost thawing leads to the formation of thermokarst ponds that potentially emit CO2 and CH4 to the atmosphere. In the Nunavik subarctic region (northern Québec, Canada), these numerous, shallow ponds become well-stratified during summer. This creates a physico-chemical gradient of temperature and oxygen, with an upper oxic layer and a bottom low oxygen or anoxic layer. Our objective was to determine the influence of stratification and related limnological and landscape properties on the community structure of potentially active bacteria in these waters. Samples for RNA analysis were taken from ponds in three contrasting valleys across a gradient of permafrost degradation. A total of 1296 operational taxonomic units were identified by high throughput amplicon sequencing, targeting bacterial 16S rRNA that was reverse transcribed to cDNA. β-proteobacteria were the dominant group in all ponds, with highest representation by the genera Variovorax and Polynucleobacter. Methanotrophs were also among the most abundant sequences at most sites. They accounted for up to 27% of the total sequences (median of 4.9% for all samples), indicating the importance of methane as a bacterial energy source in these waters. Both oxygenic (cyanobacteria) and anoxygenic (Chlorobi) phototrophs were also well-represented, the latter in the low oxygen bottom waters. Ordination analyses showed that the communities clustered according to valley and depth, with significant effects attributed to dissolved oxygen, pH, dissolved organic carbon, and total suspended solids. These results indicate that the bacterial assemblages of permafrost thaw ponds are filtered by environmental gradients, and are complex consortia of functionally diverse taxa that likely affect the composition as well as magnitude of greenhouse gas emissions from these abundant waters. PMID:25926816

The Nitrogen Inventory of the Yedoma Permafrost Domain

NASA Astrophysics Data System (ADS)

Strauss, J.; Abbott, B. W.; Biasi, C.; Grosse, G.; Horn, M. A.; Liebner, S.; Sanders, T.; Schirrmeister, L.; Schneider von Deimling, T.; Wetterich, S.; Winkel, M.; Zubrzycki, S.

2016-12-01

Fossil organic matter (OM) stored in permafrost is an important subject in climate research. Such OM represents a huge reservoir of carbon (C). Multiple studies suggest its source potential for C release into the active C cycle through permafrost thaw and subsequent microbial turnover in a warming Arctic. However, net ecosystem OM balance in the permafrost region depends on more than just carbon. The abundance and availability of nitrogen (N) following permafrost thaw will influence plant growth, nutrient delivery to aquatic and estuarine ecosystems, and N oxide (N2O) emissions. Despite its central importance to predicting permafrost impacts and feedbacks to climate change, relatively little is known about permafrost N stocks and composition. In this study, we present the most extensive dataset to date of permafrost N in the Siberian and Alaskan Yedoma domain. The Yedoma domain comprises decameter thick ice-rich silts intersected by syngenetic ice wedges, which formed in late Pleistocene tundra-steppe environments, as well as other deposits resulting from permafrost degradation during the Holocene. Together, the deposits in this region constitute a large C inventory storing several hundred Gt C, but are also known to be nutrient-rich due to rapid burial and freezing of plant remains. Hitherto, the total organic C pool of the Yedoma region was quantified, while the total N inventory is lacking so far. Based on the most comprehensive data set of N content in permafrost to date, our study aims to estimate the present pool of N stored in the different stratigraphic units of the Yedoma domain: 1) late Pleistocene Yedoma deposits, 2) in-situ thawed and diagenetically altered Yedoma deposits (taberite), 3) Holocene thermokarst deposits, 4) Holocene cover deposits on top of Yedoma, and 5) the modern active layer of soils. To quantify measurement uncertainty, we estimated nitrogen stocks with bootstrapping techniques. We show that the deposits of the Yedoma region store a substantial pool of N that is expected to get mobilized after thaw and, at least partially, affecting biogeochemical budgets of thawing warming permafrost ecosystems.

Controls on methane released through ebullition in peatlands affected by permafrost degradation

USGS Publications Warehouse

Klapstein, Sara J.; Turetsky, Merritt R.; McGuire, A. David; Harden, Jennifer W.; Czimczik, C.I.; Xu, Xiaomei; Chanton, J.P.; Waddington, James Michael

2014-01-01

Permafrost thaw in peat plateaus leads to the flooding of surface soils and the formation of collapse scar bogs, which have the potential to be large emitters of methane (CH4) from surface peat as well as deeper, previously frozen, permafrost carbon (C). We used a network of bubble traps, permanently installed 20 cm and 60 cm beneath the moss surface, to examine controls on ebullition from three collapse bogs in interior Alaska. Overall, ebullition was dominated by episodic events that were associated with changes in atmospheric pressure, and ebullition was mainly a surface process regulated by both seasonal ice dynamics and plant phenology. The majority (>90%) of ebullition occurred in surface peat layers, with little bubble production in deeper peat. During periods of peak plant biomass, bubbles contained acetate-derived CH4 dominated (>90%) by modern C fixed from the atmosphere following permafrost thaw. Post-senescence, the contribution of CH4 derived from thawing permafrost C was more variable and accounted for up to 22% (on average 7%), in the most recently thawed site. Thus, the formation of thermokarst features resulting from permafrost thaw in peatlands stimulates ebullition and CH4 release both by creating flooded surface conditions conducive to CH4 production and bubbling as well as by exposing thawing permafrost C to mineralization.

Insufficiency of copper ion homeostasis causes freeze-thaw injury of yeast cells as revealed by indirect gene expression analysis.

PubMed

Takahashi, Shunsuke; Ando, Akira; Takagi, Hiroshi; Shima, Jun

2009-11-01

Saccharomyces cerevisiae is exposed to freeze-thaw stress in commercial processes, including frozen dough baking. Cell viability and fermentation activity after a freeze-thaw cycle were dramatically decreased due to freeze-thaw injury. Because this type of injury involves complex phenomena, the injury mechanisms are not fully understood. We examined freeze-thaw injury by indirect gene expression analysis during postthaw incubation after freeze-thaw treatment using DNA microarray profiling. The results showed that genes involved in the homeostasis of metal ions were frequently contained in genes that were upregulated, depending on the freezing period. We assessed the phenotype of deletion mutants of the metal ion homeostasis genes that exhibited freezing period-dependent upregulation and found that the strains with deletion of the MAC1 and CTR1 genes involved in copper ion homeostasis exhibited freeze-thaw sensitivity, suggesting that copper ion homeostasis is required for freeze-thaw tolerance. We found that supplementation with copper ions during postthaw incubation increased intracellular superoxide dismutase activity and intracellular levels of reactive oxygen species were decreased. Moreover, cell viability was increased by supplementation with copper ions. These results suggest that insufficiency of copper ion homeostasis may be one of the causes of freeze-thaw injury.

Effect of exogenous carbon addition and the freeze-thaw cycle on soil microbes and mineral nitrogen pools1

NASA Astrophysics Data System (ADS)

Hu, Xia; Yin, Peng; Nong, Xiang; Liao, Jinhua

2018-01-01

To elucidate the alpine soil process in winter, the response mechanism of soil mineral nitrogen and soil microbes to exogenous carbon (0 mg C, 1 mg C, 2 mg C, 4 mg C and 8 mg C·g-1 dry soil) and the freeze-thaw cycle (-2 °C, -2 ∼ 2 °C, -20 ∼2°C) were studied by laboratory simulation. The freeze-thaw treatment had no significant effect on microbial biomass nitrogen and the number of bacteria. The soil mineral N pool, the number of fungi, and enzyme activities were obviously affected by the freeze-thaw cycle. A mild freeze-thaw cycle (-2∼2°C) significantly increased the number of fungi and catalase activity, while severe freeze-thaw cycle (-20∼2°C) obviously decreased invertase activity. The results suggested that both the freeze-thaw rate and freeze-thaw temperature amplitudes have a strong effect on soil microbial dynamics in the alpine zone in winter. The results showed that exogenous carbon addition significantly decreased soil NO3-N and NH4 +-N contents, increased soil microbial biomass, the number of microbes, and soil enzyme activities. The results showed that microbial growth in the eastern Tibetan Plateau was somewhat limited by available C. It may represent a larger potential pulse of soil nutrient for alpine plants in the next spring, and may be instrumental for plant community shifts under future climate change predictions due to the possible increased litter addition.

Monitoring of active layer thermal regime and depth on CALM-S site, James Ross Island, Eastern Antarctic Peninsula

NASA Astrophysics Data System (ADS)

Hrbáček, Filip; Kňažková, Michaela; Nývlt, Daniel; Láska, Kamil; Mueller, Carsten W.; Ondruch, Jakub

2017-04-01

Active layer thickness and its dynamic are considered one of the key parameters of permafrost-affected ground. They variability are very sensitive to specific local conditions, especially climate, vegetation, snow cover or soil texture and moisture. To better understand the local variability of active layer thickness in Antarctica, the original Circumpolar Active Layer Monitoring protocol (CALM) was adapted as its southern form (CALM-S) with respect to specific conditions of Antarctica. To date, almost 40 CALM-S sites were registered across the Antarctic continent with the highest density on western Antarctic Peninsula (South Shetlands) and Victoria Land in East Antarctica (McMurdo region). On James Ross Island, CALM-S site was established in February 2014 as the first CALM-S in the eastern Antarctic Peninsula region. The CALM-S site is located near the Johann Gregor Mendel Station on the northern coast of James Ross Island. The area delimited to 80 × 70 m is elevated at 8 to 11 m asl. Geologically it consists of a Holocene marine terrace ( 80% of CALM-S area) with typical sandy material and passes to lithified to poorly disintegrated sedimentary rocks of Cretaceous Whisky Bay Formation ( 20% of CALM-S area) with a more muddy material and a typical bimodal composition. For both geologically different parts of CALM-S site, ground temperature was measured at two profiles at several levels up to 200 cm depth using resistance thermometers Pt100/8 (accuracy ± 0.15 °C). The air temperature at 2 m above surface was monitored at the automatic weather station near Johann Gregor Mendel Station using resistance thermometer Pt100/A (accuracy ± 0.15 °C). Data used in this study were obtained during the period from 1 March 2013 to 6 February 2016. Mechanical probing of active layer depth was performed in 72 grid points at the end of January, or beginning of February in 2014 to 2016. During the whole study period, mean annual air temperature varied between -7.0 °C (2013) and -6.7 °C (2015), while the mean annual ground temperature at 5 cm ranged from -5.6 °C (2013) to -5.3 °C (2014). Thawing season started in mid-November between 17th (2013/14) and 24th (2014/15) and ended at the end of February (22nd in 2014/15) and beginning of March (7th in 2013/14). The maximum active layer thickness determined from 0°C isotherm varied from 86 to 87 cm at profile 1, while it reached only 51 to 65 cm at profile 2. The mean probed active layer depth varied between 66 cm (2013/4) and 78 cm (2014/15). The maximum probed active layer depth increased from 100 cm in 2014 to 113 cm in 2016. High variability of active layer depth across CALM-S site was caused by different ground thermal properties of Holocene marine terrace sand and Cretaceous clayey sandstones. These results differ significantly from another CALM-S sites in Antarctica, where the main factors affecting thawing depth variability were snow cover and topography. These results confirmed previous observation from James Ross Island, where variability of active layer depth was related primarily to different ground properties (texture, moisture, physical characteristic) then local climate or snow cover.

Rapid runoff via shallow throughflow and deeper preferential flow in a boreal catchment underlain by frozen silt (Alaska, USA)

USGS Publications Warehouse

Koch, Joshua C.; Ewing, Stephanie A.; Striegl, Robert G.; McKnight, Diane M.

2013-01-01

In high-latitude catchments where permafrost is present, runoff dynamics are complicated by seasonal active-layer thaw, which may cause a change in the dominant flowpaths as water increasingly contacts mineral soils of low hydraulic conductivity. A 2-year study, conducted in an upland catchment in Alaska (USA) underlain by frozen, well-sorted eolian silt, examined changes in infiltration and runoff with thaw. It was hypothesized that rapid runoff would be maintained by flow through shallow soils during the early summer and deeper preferential flow later in the summer. Seasonal changes in soil moisture, infiltration, and runoff magnitude, location, and chemistry suggest that transport is rapid, even when soils are thawed to their maximum extent. Between June and September, a shift occurred in the location of runoff, consistent with subsurface preferential flow in steep and wet areas. Uranium isotopes suggest that late summer runoff erodes permafrost, indicating that substantial rapid flow may occur along the frozen boundary. Together, throughflow and deep preferential flow may limit upland boreal catchment water and solute storage, and subsequently biogeochemical cycling on seasonal to annual timescales. Deep preferential flow may be important for stream incision, network drainage development, and the release of ancient carbon to ecosystems

NASA scientists are flying over Alaska

NASA Image and Video Library

2017-08-29

As part of the Arctic Boreal Vulnerability Experiment (ABoVE), NASA scientists are flying over Alaska and Canada, measuring the elevation of rivers and lakes to study how thawing permafrost affects hydrology in the landscape. This view of was taken from NASA’s DC-8 “flying laboratory” as part of the Active Sensing of CO2 Emissions over Nights, Days and Seasons (ASCENDS) experiment. Scientists on NASA’s Air Surface, Water and Ocean Topography (AirSWOT) mission have been flying over the same location, investigating how water levels in the Arctic landscape change as permafrost thaws. Under typical conditions, the frozen layer of soil keeps water from sinking into the ground and percolating away. As permafrost thaws, the water has new ways to move between rivers and lakes, which can raise or lower the elevation of the bodies of water. These changes in water levels will have effects on Arctic life— plants, animals, and humans—in the near future. Credit: NASA/Peter Griffith NASA image use policy. NASA Goddard Space Flight Center enables NASA’s mission through four scientific endeavors: Earth Science, Heliophysics, Solar System Exploration, and Astrophysics. Goddard plays a leading role in NASA’s accomplishments by contributing compelling scientific knowledge to advance the Agency’s mission. Follow us on Twitter Like us on Facebook Find us on Instagram

Effects of reduced glutathione on acrosin activity in frozen-thawed boar spermatozoa.

PubMed

Estrada, Efrén; Rodríguez-Gil, Joan E; Rivera Del Álamo, Maria M; Peña, Alejandro; Yeste, Marc

2017-02-01

In pigs, acrosin activity in extended semen is correlated with reproductive performance and has recently been identified as a freezability marker. Reduced glutathione (GSH) is known to decrease sperm cryodamage and increase the reproductive performance of frozen-thawed boar spermatozoa. However, the effects of GSH on the acrosin activity of good and poor freezability ejaculates (GFE and PFE, respectively) is yet to be examined. The present study investigated how supplementing cryopreservation media with GSH affected acrosin activity in GFE and PFE, as well as the relationship between acrosin activity and reproductive performance in frozen-thawed boar spermatozoa. In addition, we examined whether the increase in fertility rates and litter sizes observed after the addition of 2mM GSH to cryopreservation extenders was related to acrosin activity. Supplementing freezing media with 2mM GSH partially counteracted the cryopreservation-related decrease in acrosin activity in GFE but not PFE. Acrosin activity was found to be significantly correlated with in vivo reproductive performance of frozen-thawed boar semen. In conclusion, the effects of adding GSH to freezing extenders on the acrosin activity of frozen-thawed boar spermatozoa rely on the intrinsic freezability of the ejaculate. Furthermore, the maintenance of proper acrosin activity could contribute to the increase in reproductive performance mediated by GSH.

Soil respiration across a permafrost transition zone: spatial structure and environmental correlates

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stegen, James C.; Anderson, Carolyn G.; Bond-Lamberty, Ben

Soil respiration is a key ecosystem function whereby shifts in respiration rates can shift systems from carbon sinks to sources. Soil respiration in permafrost-associated systems is particularly important given climate change driven permafrost thaw that leads to significant uncertainty in resulting ecosystem carbon dynamics. Here we characterize the spatial structure and environmental drivers of soil respiration across a permafrost transition zone. We find that soil respiration is characterized by a non-linear threshold that occurs at active-layer depths greater than 140 cm. We also find that within each season, tree basal area is a dominant driver of soil respiration regardless of spatial scale, but onlymore » in spatial domains with significant spatial variability in basal area. Our analyses further show that spatial variation (the coefficient of variation) and mean-variance power-law scaling of soil respiration in our boreal system are consistent with previous work in other ecosystems (e.g., tropical forests) and in population ecology, respectively. Comparing our results to those in other ecosystems suggests that temporally stable features such as tree-stand structure are often primary drivers of spatial variation in soil respiration. If so, this provides an opportunity to better estimate the magnitude and spatial variation in soil respiration through remote sensing. Finally, combining such an approach with broader knowledge of thresholding behavior – here related to active layer depth – would provide empirical constraints on models aimed at predicting ecosystem responses to ongoing permafrost thaw.« less

Soil respiration across a permafrost transition zone: spatial structure and environmental correlates

DOE PAGES

Stegen, James C.; Anderson, Carolyn G.; Bond-Lamberty, Ben; ...

2017-09-28

Soil respiration is a key ecosystem function whereby shifts in respiration rates can shift systems from carbon sinks to sources. Soil respiration in permafrost-associated systems is particularly important given climate change driven permafrost thaw that leads to significant uncertainty in resulting ecosystem carbon dynamics. Here we characterize the spatial structure and environmental drivers of soil respiration across a permafrost transition zone. We find that soil respiration is characterized by a non-linear threshold that occurs at active-layer depths greater than 140 cm. We also find that within each season, tree basal area is a dominant driver of soil respiration regardless of spatial scale, but onlymore » in spatial domains with significant spatial variability in basal area. Our analyses further show that spatial variation (the coefficient of variation) and mean-variance power-law scaling of soil respiration in our boreal system are consistent with previous work in other ecosystems (e.g., tropical forests) and in population ecology, respectively. Comparing our results to those in other ecosystems suggests that temporally stable features such as tree-stand structure are often primary drivers of spatial variation in soil respiration. If so, this provides an opportunity to better estimate the magnitude and spatial variation in soil respiration through remote sensing. Finally, combining such an approach with broader knowledge of thresholding behavior – here related to active layer depth – would provide empirical constraints on models aimed at predicting ecosystem responses to ongoing permafrost thaw.« less

Soil respiration across a permafrost transition zone: spatial structure and environmental correlates

NASA Astrophysics Data System (ADS)

Stegen, James C.; Anderson, Carolyn G.; Bond-Lamberty, Ben; Crump, Alex R.; Chen, Xingyuan; Hess, Nancy

2017-09-01

Soil respiration is a key ecosystem function whereby shifts in respiration rates can shift systems from carbon sinks to sources. Soil respiration in permafrost-associated systems is particularly important given climate change driven permafrost thaw that leads to significant uncertainty in resulting ecosystem carbon dynamics. Here we characterize the spatial structure and environmental drivers of soil respiration across a permafrost transition zone. We find that soil respiration is characterized by a non-linear threshold that occurs at active-layer depths greater than 140 cm. We also find that within each season, tree basal area is a dominant driver of soil respiration regardless of spatial scale, but only in spatial domains with significant spatial variability in basal area. Our analyses further show that spatial variation (the coefficient of variation) and mean-variance power-law scaling of soil respiration in our boreal system are consistent with previous work in other ecosystems (e.g., tropical forests) and in population ecology, respectively. Comparing our results to those in other ecosystems suggests that temporally stable features such as tree-stand structure are often primary drivers of spatial variation in soil respiration. If so, this provides an opportunity to better estimate the magnitude and spatial variation in soil respiration through remote sensing. Combining such an approach with broader knowledge of thresholding behavior - here related to active layer depth - would provide empirical constraints on models aimed at predicting ecosystem responses to ongoing permafrost thaw.

Antimicrobial efficiency of essential oil and freeze-thaw treatments against Escherichia coli O157:H7 and Salmonella enterica Ser. Enteritidis in strawberry juice.

PubMed

Duan, J; Zhao, Y

2009-04-01

This study investigated the antimicrobial efficiency of 3 essential oils (EOs), lemongrass, cinnamon leaf, and basil, and freeze-thaw treatment, alone or in combination, against Escherichia coli O157:H7 and Salmonella enterica Ser. Enteritidis inoculated in strawberry juice stored at 7 degrees C. EO of lemongrass or cinnamon leaf at 0.1 to 2 microL/mL and freezing at -23 degrees C for 24 or 48 h followed by thawing at 7 degrees C for 4 h all showed significant antimicrobial activities (P < 0.05) against E. coli O157:H7 and S. Enteritidis in strawberry juice. The antimicrobial activity increased with increasing EO concentration and storage time, but extending freezing time from 24 to 48 h did not enhance the antimicrobial activity of freeze-thaw treatment (P > 0.05). EO of lemongrass or cinnamon leaf at 0.1 microL/mL and freeze-thaw treatment alone obtained a 5 log(10) reduction in the population of S. Enteritidis, while EOs at 0.1 to 0.3 microL/mL or freeze-thaw alone could not achieve a satisfactory protection against E. coli O157:H7 in strawberry juice. Combined EO and freeze-thaw treatment enhanced the overall antimicrobial effect against E. coli O157:H7, with adding EO before the freeze-thaw treatment showed a faster decontamination rate than when added EO after the freeze-thaw. EOs of lemongrass and cinnamon leaf at 0.1 or 0.3 microL/mL followed by the freeze-thawing resulted in a 5 log(10) reduction in E. coli O157:H7 on the 5th and 2nd day of storage, respectively. This study suggested that combined EO and freeze-thaw treatment may be a suitable and inexpensive method to eliminate microorganisms that can be a hazard for the consumers of unpasteurized berry juices.

The impacts of permafrost thaw on land-atmosphere greenhouse gas exchange

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hayes, Daniel J; Kicklighter, David W.; McGuire, A. David

2014-01-01

Permafrost thaw and the subsequent mobilization of carbon stored in previously frozen soil organic matter (SOM) would be a strong positive feedback to climate1. As the northern permafrost region experiences double the rate of warming as the rest of the Earth2, the vast amount of carbon in permafrost soils3 is vulnerable to thaw, decomposition and release as atmospheric greenhouse gases (GHG). Here, we employ a process-based model simulation experiment to assess the net effect of this so-called permafrost carbon feedback (PCF) in recent decades. Results show a wide-spread increase in the depth to permafrost between 1990 and 2006, with simulatedmore » active layer thickness (ALT) capturing the mean and spatial variability of the observational data. Analysis of the simulation experiment provides an estimate of a 2.8 mm/yr increase in permafrost depth, which translates to 281 TgC/yr thawed from previously frozen SOM. Overall, we estimate a net GHG forcing of 534 MtCO2eq/yr directly tied to ALT dynamics, while accounting for CO2 (562 MtCO2eq/yr) and CH4 (52 MtCO2eq/yr) release as well as CO2 uptake by vegetation (-80 MtCO2eq/yr). This net forcing represents a significant factor in the estimated 640 MtCO2eq/yr pan-arctic GHG source4, and an additional 6.9% contribution on top of the combined 7792 MtCO2eq/yr fossil fuel emissions from the eight Arctic nations over this time period5.« less

A Loss in the Plasma Membrane ATPase Activity and Its Recovery Coincides with Incipient Freeze-Thaw Injury and Postthaw Recovery in Onion Bulb Scale Tissue 1

PubMed Central

Arora, Rajeev; Palta, Jiwan P.

1991-01-01

Plasma membrane ATPase has been proposed to be functionally altered during early stages of injury caused by a freeze-thaw stress. Complete recovery from freezing injury in onion cells during the postthaw period provided evidence in support of this proposal. During recovery, a simultaneous decrease in ion leakage and disappearance of water soaking (symptoms of freeze-thaw injury) has been noted. Since reabsorption of ions during recovery must be an active process, recovery of plasma membrane ATPase (active transport system) functions has been implicated. In the present study, onion (Allium cepa L. cv Downing Yellow Globe) bulbs were subjected to a freeze-thaw stress which resulted in a reversible (recoverable) injury. Plasma membrane ATPase activity in the microsomes (isolated from the bulb scales) and ion leakage rate (efflux/hour) from the same scale tissue were measured immediately following thawing and after complete recovery. In injured tissue (30-40% water soaking), plasma membrane ATPase activity was reduced by about 30% and this was paralleled by about 25% higher ion leakage rate. As water soaking disappeared during recovery, the plasma membrane ATPase activity and the ion leakage rate returned to about the same level as the respective controls. Treatment of freeze-thaw injured tissue with vanadate, a specific inhibitor of plasma membrane ATPase, during postthaw prevented the recovery process. These results indicate that recovery of freeze-injured tissue depends on the functional activity of plasma membrane ATPase. PMID:16668063

Active Layer and Water Geochemistry Dynamics throughout the Yukon River Basin

NASA Astrophysics Data System (ADS)

Mutter, E. A.; Toohey, R.; Herman-Mercer, N. M.; Schuster, P. F.

2017-12-01

The hydrology of the Yukon River Basin has changed over the last several decades as evidenced by a variety of discharge, gravimetric, and geochemical analyses. The Indigenous Observation Network (ION), a community-based project, was initiated by the Yukon River Inter-Tribal Watershed Council and USGS. Capitalizing on existing USGS monitoring and research infrastructure and supplementing USGS collected data, ION investigates changes in surface water geochemistry and active layer dynamics throughout the Yukon River Basin. Over 1600 samples of surface water geochemistry (i.e., major ions, dissolved organic carbon, and 18O and 2H) have been collected at 35 sites throughout the Yukon River and its major tributaries over the past 15 years. Active layer dynamics (maximum thaw depth, soil temperature and moisture) have been collected at 20 sites throughout the Yukon River Basin for the past eight years. Important regional differences in geochemistry and active layer parameters linked to permafrost continuity and tributaries will be highlighted. Additionally, annual trends and seasonal dynamics describing the spatial and temporal heterogeneity of the watershed will be presented in the context of observed hydrological changes. These data assist the global effort to characterize arctic river fluxes and their relationship to the carbon cycle, weathering and permafrost degradation.

Active layer thermal monitoring at Fildes Peninsula, King George Island, Maritime Antarctica

NASA Astrophysics Data System (ADS)

Michel, R. F. M.; Schaefer, C. E. G. R.; Simas, F. N. B.; Francelino M., R.; Fernandes-Filho, E. I.; Lyra, G. B.; Bockheim, J. G.

2014-07-01

International attention to the climate change phenomena has grown in the last decade; the active layer and permafrost are of great importance in understanding processes and future trends due to their role in energy flux regulation. The objective of the this paper is to present active layer temperature data for one CALM-S site located at Fildes Peninsula, King George Island, Maritime Antarctica over an fifth seven month period (2008-2012). The monitoring site was installed during the summer of 2008 and consists of thermistors (accuracy of ± 0.2 °C), arranged vertically with probes at different depths, recording data at hourly intervals in a~high capacity data logger. A series of statistical analysis were performed to describe the soil temperature time series, including a linear fit in order to identify global trend and a series of autoregressive integrated moving average (ARIMA) models were tested in order to define the best fit for the data. The controls of weather on the thermal regime of the active layer have been identified, providing insights about the influence of climate chance over the permafrost. The active layer thermal regime in the studied period was typical of periglacial environment, with extreme variation at the surface during summer resulting in frequent freeze and thaw cycles. The active layer thickness (ALT) over the studied period showed variability related to different annual weather conditions, reaching a maximum of 117.5 cm in 2009. The ARIMA model was considered appropriate to treat the dataset, enabling more conclusive analysis and predictions when longer data sets are available. Despite the variability when comparing temperature readings and active layer thickness over the studied period, no warming trend was detected.

Active-layer thermal monitoring on the Fildes Peninsula, King George Island, maritime Antarctica

NASA Astrophysics Data System (ADS)

Michel, R. F. M.; Schaefer, C. E. G. R.; Simas, F. M. B.; Francelino, M. R.; Fernandes-Filho, E. I.; Lyra, G. B.; Bockheim, J. G.

2014-12-01

International attention to climate change phenomena has grown in the last decade; the active layer and permafrost are of great importance in understanding processes and future trends due to their role in energy flux regulation. The objective of this paper is to present active-layer temperature data for one Circumpolar Active Layer Monitoring South hemisphere (CALM-S) site located on the Fildes Peninsula, King George Island, maritime Antarctica over an 57-month period (2008-2012). The monitoring site was installed during the summer of 2008 and consists of thermistors (accuracy of ±0.2 °C), arranged vertically with probes at different depths, recording data at hourly intervals in a high-capacity data logger. A series of statistical analyses was performed to describe the soil temperature time series, including a linear fit in order to identify global trends, and a series of autoregressive integrated moving average (ARIMA) models was tested in order to define the best fit for the data. The affects of weather on the thermal regime of the active layer have been identified, providing insights into the influence of climate change on permafrost. The active-layer thermal regime in the studied period was typical of periglacial environments, with extreme variation in surface during the summer resulting in frequent freeze and thaw cycles. The active-layer thickness (ALT) over the studied period shows a degree of variability related to different annual weather conditions, reaching a maximum of 117.5 cm in 2009. The ARIMA model could describe the data adequately and is an important tool for more conclusive analysis and predictions when longer data sets are available. Despite the variability when comparing temperature readings and ACT over the studied period, no trend can be identified.

Microbial respiration and DOC composition in leachates from Holocene and Pleistocene soils from the Kolyma River basin in Eastern Siberia

NASA Astrophysics Data System (ADS)

Lewis, K.; Schade, J. D.; Sobczak, W. V.; Holmes, R. M.; Zimov, N.; Bulygina, E. B.; Chandra, S.; Bunn, A. G.; Russell-Roy, L.; Seybold, E. C.

2010-12-01

Permafrost is generally considered a long-term sink for carbon that remains locked away from the global carbon cycle. Anthropogenic climate change is likely to lead to thawing of permafrost and deepening of the soil active layer. Consequently, this carbon sink may become unlocked and available for bacterial decomposition, returning stored carbon to the active carbon cycle, with potentially severe consequences for atmospheric CO2 concentrations. The Kolyma watershed, in the Eastern Siberian Arctic, is underlain by continuous permafrost, often referred to as Yedoma, which provides a unique environment to study potential consequences of permafrost thaw for carbon dynamics in aquatic and terrestrial ecosystems. In order to predict the potential consequences of a major carbon input from thawing permafrost, we assessed the relative bioavailabilty of soil carbon by measuring rates of microbial consumption and changes in DOM composition in soil leachates. At two spatially distinct sample sites, soil was collected throughout the profile from the active layer and from permafrost, including soils from both Holocene and Pleistocene-era permafrost. To evaluate the rates of carbon processing and potential linkages to N and P cycles, we conducted a series of bottle experiments in which we measured biological oxygen demand as a proxy for carbon processing and assessed changes in the composition of dissolved organic carbon using spectral analyses. Experiments were conducted on leachate collected from each soil type. Each experiment included treatments in which leachates were enriched with nitrogen and phosphorus to determine whether carbon processing in soils was nutrient limited. We found substantial variation in oxygen consumption, with Yedoma soils generally exhibiting higher rates than Holocene soils, suggesting higher concentrations of labile carbon. We found no evidence of nutrient limitation of carbon processing in any soil leachates. Spectral slope analysis suggests that carbon processing increased the proportion of heavy aromatic carbon compounds in all but one soil type, suggesting that small molecular weight compounds are consumed first. The exception was the most active Yedoma soil, which showed the opposite effect, indicating an increase in the proportion of small molecules due to the presence of a different, and perhaps more digestible, form of carbon. These results suggest strong spatial variation in the amount and form of available carbon, as well as qualitative differences in the dynamics of carbon processing.

[Effects of snow pack on soil nitrogen transformation enzyme activities in a subalpine Abies faxioniana forest of western Sichuan, China].

PubMed

Xiong, Li; Xu, Zhen-Feng; Wu, Fu-Zhong; Yang, Wan-Qin; Yin, Rui; Li, Zhi-Ping; Gou, Xiao-Lin; Tang, Shi-Shan

2014-05-01

This study characterized the dynamics of the activities of urease, nitrate reductase and nitrite reductase in both soil organic layer and mineral soil layer under three depths of snow pack (deep snowpack, moderate snowpack and shallow snowpack) over the three critical periods (snow formed period, snow stable period, and snow melt period) in the subalpine Abies faxoniana forest of western Sichuan in the winter of 2012 and 2013. Throughout the winter, soil temperature under deep snowpack increased by 46.2% and 26.2%, respectively in comparison with moderate snowpack and shallow snowpack. In general, the three nitrogen-related soil enzyme activities under shallow snowpack were 0.8 to 3.9 times of those under deep snowpack during the winter. In the beginning and thawing periods of seasonal snow pack, shallow snowpack significantly increased the activities of urease, nitrate and nitrite reductase enzyme in both soil organic layer and mineral soil layer. Although the activities of the studied enzymes in soil organic layer and mineral soil layer were observed to be higher than those under deep- and moderate snowpacks in deep winter, no significant difference was found under the three snow packs. Meanwhile, the effects of snowpack on the activities of the measured enzymes were related with season, soil layer and enzyme type. Significant variations of the activities of nitrogen-related enzymes were found in three critical periods over the winter, and the three measured soil enzymes were significantly higher in organic layer than in mineral layer. In addition, the activities of the three measured soil enzymes were closely related with temperature and moisture in soils. In conclusion, the decrease of snow pack induced by winter warming might increase the activities of soil enzymes related with nitrogen transformation and further stimulate the process of wintertime nitrogen transformation in soils of the subalpine forest.

Genes Upregulated in Winter Wheat (Triticum aestivum L.) during Mild Freezing and Subsequent Thawing Suggest Sequential Activation of Multiple Response Mechanisms.

PubMed

Skinner, Daniel Z

2015-01-01

Exposing fully cold-acclimated wheat plants to a mild freeze-thaw cycle of -3 °C for 24h followed by +3 °C for 24 or 48 h results in dramatically improved tolerance of subsequent exposure to sub-freezing temperatures. Gene enrichment analysis of crown tissue from plants collected before or after the -3 °C freeze or after thawing at +3 °C for 24 or 48 h revealed that many biological processes and molecular functions were activated during the freeze-thaw cycle in an increasing cascade of responses such that over 150 processes or functions were significantly enhanced by the end of the 48 h, post-freeze thaw. Nearly 2,000 individual genes were upregulated more than 2-fold over the 72 h course of freezing and thawing, but more than 70% of these genes were upregulated during only one of the time periods examined, suggesting a series of genes and gene functions were involved in activation of the processes that led to enhanced freezing tolerance. This series of functions appeared to include extensive cell signaling, activation of stress response mechanisms and the phenylpropanoid biosynthetic pathway, extensive modification of secondary metabolites, and physical restructuring of cell membranes. By identifying plant lines that are especially able to activate these multiple mechanisms it may be possible to develop lines with enhanced winterhardiness.

Effects of Freezing and Thawing on Consolidation Behavior of Clayey Soils

NASA Astrophysics Data System (ADS)

Binal, Adil; Adeli, Parisa

2015-04-01

An apprehending of freezing and thawing effects on cohesive soil is considerable for many construction and environmental subjects. This paper relates the effects of freezing and thawing on consolidation behaviour of clayey soils. The Capital of Ankara settled on a sequence of lacustrine sediments. These sediments include fine grain soils, locally. Collected samples were undisturbed grey clay and clayey sand that were obtained from the bottom of a construction zone at about 1m depth below the ground surface. Total of 32 moulded samples were prepared with constant water content to reflect the moisture condition in the active surface layer. Gray clay and clayey sand were analysed in the laboratory, and found to have the plastic limits (PL) of 33.01% and 22.56%, the liquid limits (LL) of 75.05% and 36.97%, and the plasticity indexes (PI) of 42.04% and 14.41%. The soil samples were classified as "CH" and "SC" in accordance with the unified soil classification system. Soil samples for all tests were placed in a freezer that has -18°C temperature. Samples have been waited in it for twenty-four hours. Then, they have been removed from the freezer and allowed to stand for twenty-four hours at a constant room temperature (21°C) and humidity (80% RH). As a result, one freezing and thawing cycle was achieved between -18°C (24 hours) and 21°C (24 hours), and it took two days. Freezing and thawing (FT) sequences were selected as 1, 3, 7, 14 and 21. After each FT sequence, Atterberg limits and consolidation tests were carried out in accordance with ASTM standards. Liquid and plastic limits of soil samples, suddenly, were decreased after first FT cycle. That state is a sign of the clay mineral orientation due to freezing and thawing process. The soil classification of clayey sand was changed from "SC" to "SM" after first FT cycle. Furthermore, the coefficient of consolidation and permeability of grey clay had been increased by rising in FT cycles up to 7 and then continue to decline as well as these values of clayey sand start to decrease after 14 FT cycles.

Tundra ecosystem respiration is dominated by recent C inputs, masking contributions from old and more decomposed substrates

NASA Astrophysics Data System (ADS)

Mauritz, M.; Celis, G.; Ebert, C.; Hutchings, J. A.; Ledman, J.; Pegoraro, E.; Salmon, V.; Schaedel, C.; Taylor, M.; Schuur, E.

2017-12-01

Rising global temperatures and increasing soil respiration are of great concern in high latitude permafrost ecosystems where substantial amounts of carbon (C) are stabilized by cold temperatures. The isotopic δ13C and Δ14C signature of respiration can be used to determine contributions of decomposition from above- and belowground plant respiration, and different parts of the soil column because δ13C and Δ14C change with depth, reflecting new plant inputs at the surface and organic matter in later stages of decomposition at depth. We measured ecosystem respiration (Reco) δ13C from early summer thaw until the end of summer transition from net ecosystem C uptake to net C release in a warming experiment with accelerated permafrost thaw and a vegetation removal treatment and determined the effect of thaw, water table, and plant productivity on seasonal Reco δ13C. When the system was a net CO2 sink in early August and after the system switched to a source we measured Δ14C to further resolve Reco sources. Reco δ13C was most enriched in spring (-23.02 ‰) suggesting that spring thaw released winter-trapped CO2 from soil decomposition in deeper soil layers. In areas with shallow thaw depletion of Reco δ13C from spring (-22.54 ‰) to autumn (-24.54 ‰) indicates a seasonally increasing contribution from plant root respiration and surface soil decomposition, even after surface soils cooled and aboveground leaves senesced. In deeply thawed, dry areas Reco δ13C (-23.33 ‰) was significantly enriched and showed no seasonal pattern while Reco δ13C from deeply thawed, wet areas (-24.19 ‰) was significantly depleted and similarly lacked seasonal change. Reco δ 13C from vegetation free areas was depleted and remained similar all season (-25.28 ‰). Decline of Reco Δ14C between early August (Δ14C: 30 ‰) and September (Δ14C: 6.85 ‰), indicates an underlying contribution to Reco from old, deep soil sources that was masked by high plant activity and surface soil decomposition, even when vegetation was removed (Δ14C removal, Aug: 53.55 ‰; Sep: -86.9 ‰). Our findings demonstrate that the strength of seasonal patterns in Reco δ13C depend on thaw and water table heterogeneity of the landscape. We conclude that the timing of Reco δ 13C and Δ 14C measurements will strongly influence any conclusions about deep soil contributions.

Initial Conceptualization and Application of the Alaska Thermokarst Model

NASA Astrophysics Data System (ADS)

Bolton, W. R.; Lara, M. J.; Genet, H.; Romanovsky, V. E.; McGuire, A. D.

2015-12-01

Thermokarst topography forms whenever ice-rich permafrost thaws and the ground subsides due to the volume loss when ground ice transitions to water. The Alaska Thermokarst Model (ATM) is a large-scale, state-and-transition model designed to simulate transitions between landscape units affected by thermokarst disturbance. The ATM uses a frame-based methodology to track transitions and proportion of cohorts within a 1-km2 grid cell. In the arctic tundra environment, the ATM tracks thermokarst-related transitions among wetland tundra, graminoid tundra, shrub tundra, and thermokarst lakes. In the boreal forest environment, the ATM tracks transitions among forested permafrost plateau, thermokarst lakes, collapse scar fens and bogs. The transition from one cohort to another due to thermokarst processes can take place if thaw reaches ice-rich ground layers either due to pulse disturbance (i.e. large precipitation event or fires), or due to gradual active layer deepening that eventually results in penetration of the protective layer. The protective layer buffers the ice-rich soils from the land surface and is critical to determine how susceptible an area is to thermokarst degradation. The rate of terrain transition in our model is determined by a set of rules that are based upon the ice-content of the soil, the drainage efficiency (or the ability of the landscape to store or transport water), the cumulative probability of thermokarst initiation, distance from rivers, lake dynamics (increasing, decreasing, or stable), and other factors. Tundra types are allowed to transition from one type to another (for example, wetland tundra to graminoid tundra) under favorable climatic conditions. In this study, we present our conceptualization and initial simulation results from in the arctic (the Barrow Peninsula) and boreal (the Tanana Flats) regions of Alaska.

Carbon and geochemical properties of cryosols on the North Slope of Alaska

USGS Publications Warehouse

Mu, Cuicui; Zhang, Tingjun; Schuster, Paul F.; Schaefer, Kevin; Wickland, Kimberly P.; Repert, Deborah A.; Liu, Lin; Schaefer, Tim; Cheng, Guodong

2014-01-01

Cryosols contain roughly 1700 Gt of Soil organic carbon (SOC) roughly double the carbon content of the atmosphere. As global temperature rises and permafrost thaws, this carbon reservoir becomes vulnerable to microbial decomposition, resulting in greenhouse gas emissions that will amplify anthropogenic warming. Improving our understanding of carbon dynamics in thawing permafrost requires more data on carbon and nitrogen content, soil physical and chemical properties and substrate quality in cryosols. We analyzed five permafrost cores obtained from the North Slope of Alaska during the summer of 2009. The relationship between SOC and soil bulk density can be adequately represented by a logarithmic function. Gas fluxes at − 5 °C and 5 °C were measured to calculate the temperature response quotient (Q10). Q10 and the respiration per unit soil C were higher in permafrost-affected soils than that in the active layer, suggesting that decomposition and heterotrophic respiration in cryosols may contribute more to global warming.

Calcium interacts with antifreeze proteins and chitinase from cold-acclimated winter rye.

PubMed

Stressmann, Maja; Kitao, Satoshi; Griffith, Marilyn; Moresoli, Christine; Bravo, León A; Marangoni, Alejandro G

2004-05-01

During cold acclimation, winter rye (Secale cereale) plants accumulate pathogenesis-related proteins that are also antifreeze proteins (AFPs) because they adsorb onto ice and inhibit its growth. Although they promote winter survival in planta, these dual-function AFPs proteins lose activity when stored at subzero temperatures in vitro, so we examined their stability in solutions containing CaCl2, MgCl2, or NaCl. Antifreeze activity was unaffected by salts before freezing, but decreased after freezing and thawing in CaCl2 and was recovered by adding a chelator. Ca2+ enhanced chitinase activity 3- to 5-fold in unfrozen samples, although hydrolytic activity also decreased after freezing and thawing in CaCl2. Native PAGE, circular dichroism, and Trp fluorescence experiments showed that the AFPs partially unfold after freezing and thawing, but they fold more compactly or aggregate in CaCl2. Ruthenium red, which binds to Ca(2+)-binding sites, readily stained AFPs in the absence of Ca2+, but less stain was visible after freezing and thawing AFPs in CaCl2. We conclude that the structure of AFPs changes during freezing and thawing, creating new Ca(2+)-binding sites. Once Ca2+ binds to those sites, antifreeze activity, chitinase activity and ruthenium red binding are all inhibited. Because free Ca2+ concentrations are typically low in the apoplast, antifreeze activity is probably stable to freezing and thawing in planta. Ca2+ may regulate chitinase activity if concentrations are increased locally by release from pectin or interaction with Ca(2+)-binding proteins. Furthermore, antifreeze activity can be easily maintained in vitro by including a chelator during frozen storage.

Influence of time, storage temperature and freeze/thaw cycles on the activity of digestive enzymes from gilthead sea bream (Sparus aurata).

PubMed

Solovyev, Mikhail; Gisbert, Enric

2016-10-01

In this study, we tested the effects of long-term storage (2 years) at -20 °C and short-term storage (several hours) in ice and freeze/thaw cycles on the activities of pancreatic, gastric and intestinal (brush border and cytosolic) digestive enzymes in a teleost fish species. The results revealed a significant lose in activity of pancreatic (trypsin, chymotrypsin, total alkaline proteases and α-amylase) and intestinal cytosolic (leucine-alanine peptidase) enzymes between 140 and 270 days of storage at -20 °C, whereas in contrast, the activity of all the assayed brush border enzymes remained constant during the first 2 years of storage at -20 °C. During short-term storage conditions, the most stable enzymes assayed were those of the enterocytes of the brush border, which did not show any change in activity after being held for 5 h in ice. Five freezing and thawing cycles did not affect the activity of the intestinal brush border enzymes and the cytosolic ones, whereas the activity of trypsin, α-amylase and bile-salt-activated lipase was significantly affected by the number of freezing and thawing cycles. No changes in pepsin activity were found in samples exposed to 1 and 2 freezing and thawing cycles.

Development of SMAP Mission Cal/Val Activities

NASA Technical Reports Server (NTRS)

Colliander, A.; Jackson, T.; Kimball, J.; Cosh, M.; Spencer, M.; Entekhabi, D.; Njoku, E.; ONeill, P.

2010-01-01

The Soil Moisture Active Passive (SMAP) mission is a NASA directed mission to map global land surface soil moisture and freeze-thaw state. Instrument and mission details are shown. The key SMAP soil moisture product is provided at 10 km resolution with 0.04cubic cm/cubic cm accuracy. The freeze/thaw product is provided at 3 km resolution and 80% frozen-thawed classification accuracy. The full list of SMAP data products is shown.

Groundwater hydrochemistry in the active layer of the proglacial zone, Finsterwalderbreen, Svalbard

USGS Publications Warehouse

Cooper, R.J.; Wadham, J.L.; Tranter, M.; Hodgkins, R.; Peters, N.E.

2002-01-01

Glacial bulk meltwaters and active-layer groundwaters were sampled from the proglacial zone of Finsterwalderbreen during a single melt season in 1999, in order to determine the geochemical processes that maintain high chemical weathering rates in the proglacial zone of this glacier. Results demonstrate that the principle means of solute acquisition is the weathering of highly reactive moraine and fluvial active-layer sediments by supra-permafrost groundwaters. Active-layer groundwater derives from the thaw of the proglacial snowpack, buried ice and glacial bulk meltwaters. Groundwater evolves by sulphide oxidation and carbonate dissolution. Evaporation- and freeze-concentration of groundwater in summer and winter, respectively produce Mg-Ca-sulphate salts on the proglacial surface. Re-dissolution of these salts in early summer produces groundwaters that are supersaturated with respect to calcite. There is a pronounced spatial pattern to the geochemical evolution of groundwater. Close to the main proglacial channel, active layer sediments are flushed diurnally by bulk meltwaters. Here, Mg-Ca-sulphate deposits become exhausted in the early season and geochemical evolution proceeds by a combination of sulphide oxidation and carbonate dissolution. At greater distances from the channel, the dissolution of Mg-Ca-sulphate salts is a major influence and dilution by the bulk meltwaters is relatively minor. The influence of sulphate salt dissolution decreases during the sampling season, as these salts are exhausted and waters become increasingly routed by subsurface flowpaths. ?? 2002 Elsevier Science B.V. All rights reserved.

Effects of Conversion from Boreal Forest to Arctic Steppe on Soil Communities and Ecosystem Carbon Pools

NASA Astrophysics Data System (ADS)

Han, P. D.; Natali, S.; Schade, J. D.; Zimov, N.; Zimov, S. A.

2014-12-01

The end of the Pleistocene marked the extinction of a great variety of arctic megafauna, which, in part, led to the conversion of arctic grasslands to modern Siberian larch forest. This shift may have increased the vulnerability of permafrost to thawing because of changes driven by the vegetation shift; the higher albedo of grassland and low insulation of snow trampled by animals may have decreased soil temperatures and reduced ground thaw in the grassland ecosystem, resulting in protection of organic carbon in thawed soil and permafrost. To test these hypothesized impacts of arctic megafauna, we examined an experimental reintroduction of large mammals in northeast Siberia, initiated in 1988. Pleistocene Park now contains 23 horses, three musk ox, one bison, and several moose in addition to the native fauna. The park is 16 square km with a smaller enclosure (< 1 km) where animals spend most of their time and our study was focused. We measured carbon-pools in forested sites (where scat surveys showed low animal use), and grassy sites (which showed higher use), within the park boundaries. We also measured thaw depth and documented the soil invertebrate communities in each ecosystem. There was a substantial difference in number of invertebrates per kg of organic soil between the forest (600 ± 250) and grassland (300 ± 250), though these differences were not statistically significant they suggest faster nutrient turnover in the forest or a greater proportion of decomposition by invertebrates than other decomposers. While thaw depth was deeper in the grassland (60 ± 4 cm) than in the forest (40 ± 6 cm), we did not detect differences in organic layer depth or percent organic matter between grassland and forest. However, soil in the grassland had higher bulk density, and higher carbon stocks in the organic and mineral soil layers. Although deeper thaw depth in the grassland suggests that more carbon is available to microbial decomposers, ongoing temperature monitoring will help determine whether or not differences detected in summer continue throughout the year. This study provides a preliminary understanding of the role megafauna play in carbon emissions from the arctic, and suggests that animals play a critical role in regulating permafrost thaw and the fate of carbon stored in Arctic soils.

Formation of lacustrine plains in west-central Alaska as a result of permafrost degradation and aggradation

NASA Astrophysics Data System (ADS)

Kanevskiy, M. Z.; Jorgenson, M. T.; Shur, Y.; O'Donnell, J.; Harden, J. W.; Fortier, D.

2012-12-01

Perennially frozen lacustrine sediments containing a large amount of ground ice comprise a significant part of the upper permafrost of the lowlands of west-central Alaska, including Koyukuk Flats and Innoko Flats. Study sites are located in the discontinuous permafrost zone, where permafrost was encountered mainly within uplifted peat plateaus. The upper part of studied sections is formed by frozen peat up to 3 m thick underlain by lacustrine silt, which is mostly ice-rich. Cryogenic structure of lacustrine sediments at different sites has common features: (1) prevalence of layered, braided, and reticulate cryostructures; (2) high variability in the ice content of sediments; (3) high density and low water content of soil aggregates separated by ice lenses. Volume of visible ice in silt reaches at places 40% and more. The thickness of ice lenses generally varies from 1 to 5 cm and occasionally reaches 10 cm. Remnants of peat plateaus are surrounded by unfrozen bogs and fens, formed as a result of thawing and settling of ice-rich lacustrine silt. Modern thermokarst scars initially form at places where ice-rich silt is not protected by a thick layer of organic material. Further development of thermokarst bogs includes lateral enlargement of thaw bulbs and collapsing of the margins of peat plateaus. Lacustrine silt within taliks is covered by woody peat accumulated under forests during the stage of permafrost plateau formation and then by aquatic sphagnum peat accumulated in taliks after collapse. We relate the formation of ice-rich lacustrine sediments to development of lake thermokarst, which affected ice-rich silty yedoma deposits during the transition from Pleistocene to Holocene. Terrain development in lacustrine lowlands of west-central Alaska includes five stages related to permafrost aggradation and degradation from the late Pleistocene to the present time: 1) formation of the ice-rich syngenetic permafrost (yedoma) during the late Pleistocene; 2) yedoma degradation in the yearly Holocene and formation of thaw lakes; 3) complete yedoma degradation under thaw lakes and refreezing of thawed sediments at elevated areas; 4) peat accumulation and freezing of sediments in thaw lake basins; and 5) new cycle of thermokarst and formation of taliks under thaw lakes, bogs and fens. Stages of terrain development of lacustrine lowlands since the Late Pleistocene

Degradation and stabilization of ice wedges: Implications for assessing risk of thermokarst in northern Alaska

NASA Astrophysics Data System (ADS)

Kanevskiy, Mikhail; Shur, Yuri; Jorgenson, Torre; Brown, Dana R. N.; Moskalenko, Nataliya; Brown, Jerry; Walker, Donald A.; Raynolds, Martha K.; Buchhorn, Marcel

2017-11-01

Widespread degradation of ice wedges has been observed during the last decades in numerous areas within the continuous permafrost zone of Eurasia and North America. To study ice-wedge degradation, we performed field investigations at Prudhoe Bay and Barrow in northern Alaska during 2011-2016. In each study area, a 250-m transect was established with plots representing different stages of ice-wedge degradation/stabilization. Field work included surveying ground- and water-surface elevations, thaw-depth measurements, permafrost coring, vegetation sampling, and ground-based LiDAR scanning. We described cryostratigraphy of frozen soils and stable isotope composition, analyzed environmental characteristics associated with ice-wedge degradation and stabilization, evaluated the vulnerability and resilience of ice wedges to climate change and disturbances, and developed new conceptual models of ice-wedge dynamics that identify the main factors affecting ice-wedge degradation and stabilization and the main stages of this quasi-cyclic process. We found significant differences in the patterns of ice-wedge degradation and stabilization between the two areas, and the patterns were more complex than those previously described because of the interactions of changing topography, water redistribution, and vegetation/soil responses that can interrupt or reinforce degradation. Degradation of ice wedges is usually triggered by an increase in the active-layer thickness during exceptionally warm and wet summers or as a result of flooding or disturbance. Vulnerability of ice wedges to thermokarst is controlled by the thickness of the intermediate layer of the upper permafrost, which overlies ice wedges and protects them from thawing. In the continuous permafrost zone, degradation of ice wedges rarely leads to their complete melting; and in most cases wedges eventually stabilize and can then resume growing, indicating a somewhat cyclic and reversible process. Stabilization of ice wedges after their partial degradation makes them better protected than before degradation because the intermediate layer is usually 2 to 3 times thicker on top of stabilized ice wedges than on top of initial ice wedges in undisturbed conditions. As a result, the likelihood of formation of large thaw lakes in the continuous permafrost zone triggered by ice-wedge degradation alone is very low.

Influence of freeze-thaw events on carbon dioxide emission from soils at different moisture and land use.

PubMed

Kurganova, Irina; Teepe, Robert; Loftfield, Norman

2007-02-19

The repeated freeze-thaw events during cold season, freezing of soils in autumn and thawing in spring are typical for the tundra, boreal, and temperate soils. The thawing of soils during winter-summer transitions induces the release of decomposable organic carbon and acceleration of soil respiration. The winter-spring fluxes of CO2 from permanently and seasonally frozen soils are essential part of annual carbon budget varying from 5 to 50%. The mechanisms of the freeze-thaw activation are not absolutely clear and need clarifying. We investigated the effect of repeated freezing-thawing events on CO2 emission from intact arable and forest soils (Luvisols, loamy silt; Central Germany) at different moisture (65% and 100% of WHC). Due to the measurement of the CO2 flux in two hours intervals, the dynamics of CO2 emission during freezing-thawing events was described in a detailed way. At +10 degrees C (initial level) in soils investigated, carbon dioxide emission varied between 7.4 to 43.8 mg C m-2h-1 depending on land use and moisture. CO2 flux from the totally frozen soil never reached zero and amounted to 5 to 20% of the initial level, indicating that microbial community was still active at -5 degrees C. Significant burst of CO2 emission (1.2-1.7-fold increase depending on moisture and land use) was observed during thawing. There was close linear correlation between CO2 emission and soil temperature (R2 = 0.86-0.97, P < 0.001). Our investigations showed that soil moisture and land use governed the initial rate of soil respiration, duration of freezing and thawing of soil, pattern of CO2 dynamics and extra CO2 fluxes. As a rule, the emissions of CO2 induced by freezing-thawing were more significant in dry soils and during the first freezing-thawing cycle (FTC). The acceleration of CO2 emission was caused by different processes: the liberation of nutrients upon the soil freezing, biological activity occurring in unfrozen water films, and respiration of cold-adapted microflora.

Colloid centrifugation of fresh stallion semen before cryopreservation decreased microorganism load of frozen-thawed semen without affecting seminal kinetics.

PubMed

Guimarães, T; Lopes, G; Pinto, M; Silva, E; Miranda, C; Correia, M J; Damásio, L; Thompson, G; Rocha, A

2015-01-15

Freezability of equine semen may be influenced by microorganism population of semen. The objective of this study was to verify the effect of single-layer density gradient centrifugation (SLC) of fresh semen before cryopreservation on semen's microbial load (ML) and sperm cells kinetics after freezing-thawing. For that, one ejaculate was collected from 20 healthy stallions and split into control (C) samples (cryopreserved without previous SLC) and SLC samples (subjected to SLC). Semen cryopreservation was performed according to the same protocol in both groups. Microbial load of each microorganism species and total microbial load (TML) expressed in colony-forming units (CFU/mL) as well as frozen-thawed sperm kinetics were assessed in both groups. Additional analysis of the TML was performed, subdividing the frozen-thawed samples in "suitable" (total motility ≥ 30%) and "unsuitable" (total motility < 30%) semen for freezing programs, and comparing the C and SLC groups within these subpopulations. After thawing, SLC samples had less (P < 0.05) TML (88.65 × 10(2) ± 83.8 × 10(2) CFU/mL) than C samples (155.69 × 10(2) ± 48.85 × 10(2) CFU/mL), mainly due to a reduction of Enterococcus spp. and Bacillus spp. A relationship between post-thaw motility and SLC effect on ML was noted, as only in samples with more than 30% total motility was ML reduced (P < 0.05) by SLC (from 51.33 × 10(2) ± 33.26 × 10(2) CFU/mL to 26.68 × 10(2) ± 12.39 × 10(2) CFU/mL in "suitable" frozen-thawed semen vs. 240.90 × 10(2) ± 498.20 × 10(2) to 139.30 × 10(2) ± 290.30 × 10(2) CFU/mL in "unsuitable" frozen-thawed semen). The effect of SLC on kinetics of frozen-thawed sperm cells was negligible. Copyright © 2015 Elsevier Inc. All rights reserved.

Using dissolved organic matter age and composition to detect permafrost thaw in boreal watersheds of interior Alaska

NASA Astrophysics Data System (ADS)

O'Donnell, Jonathan A.; Aiken, George R.; Walvoord, Michelle A.; Raymond, Peter A.; Butler, Kenna D.; Dornblaser, Mark M.; Heckman, Katherine

2014-11-01

Recent warming at high latitudes has accelerated permafrost thaw, which can modify soil carbon dynamics and watershed hydrology. The flux and composition of dissolved organic matter (DOM) from soils to rivers are sensitive to permafrost configuration and its impact on subsurface hydrology and groundwater discharge. Here, we evaluate the utility of DOM composition and age as a tool for detecting permafrost thaw in three rivers (Beaver, Birch, and Hess Creeks) within the discontinuous permafrost zone of interior Alaska. We observed strong temporal controls on Δ14C content of hydrophobic acid isolates (Δ14C-HPOA) across all rivers, with the most enriched values occurring during spring snowmelt (75 ± 8‰) and most depleted during winter flow (-21 ± 8‰). Radiocarbon ages of winter flow samples ranged from 35 to 445 yr BP, closely tracking estimated median base flow travel times for this region (335 years). During spring snowmelt, young DOM was composed of highly aromatic, high molecular-weight compounds, whereas older DOM of winter flow had lower aromaticity and molecular weight. We observed a significant correlation between Δ14C-HPOA and UV absorbance coefficient at 254 nm (α254) across all study rivers. Using α254 as an optical indicator for Δ14C-HPOA, we also observed a long-term decline in α254 during maximum annual thaw depth over the last decade at the Hess Creek study site. These findings suggest a shift in watershed hydrology associated with increasing active layer thickness. Further development of DOM optical indicators may serve as a novel and inexpensive tool for detecting permafrost degradation in northern watersheds.

Using dissolved organic matter age and composition to detect permafrost thaw in boreal watersheds of interior Alaska

USGS Publications Warehouse

O'Donnell, Jonathan A.; Aiken, George R.; Walvoord, Michelle Ann; Raymond, Peter A.; Butler, Kenna D.; Dornblaser, Mark M.; Heckman, Katherine

2014-01-01

Recent warming at high latitudes has accelerated permafrost thaw, which can modify soil carbon dynamics and watershed hydrology. The flux and composition of dissolved organic matter (DOM) from soils to rivers are sensitive to permafrost configuration and its impact on subsurface hydrology and groundwater discharge. Here, we evaluate the utility of DOM composition and age as a tool for detecting permafrost thaw in three rivers (Beaver, Birch, and Hess Creeks) within the discontinuous permafrost zone of interior Alaska. We observed strong temporal controls on Δ14C content of hydrophobic acid isolates (Δ14C-HPOA) across all rivers, with the most enriched values occurring during spring snowmelt (75 ± 8‰) and most depleted during winter flow (−21 ± 8‰). Radiocarbon ages of winter flow samples ranged from 35 to 445 yr BP, closely tracking estimated median base flow travel times for this region (335 years). During spring snowmelt, young DOM was composed of highly aromatic, high molecular-weight compounds, whereas older DOM of winter flow had lower aromaticity and molecular weight. We observed a significant correlation between Δ14C-HPOA and UV absorbance coefficient at 254 nm (α254) across all study rivers. Usingα254 as an optical indicator for Δ14C-HPOA, we also observed a long-term decline in α254 during maximum annual thaw depth over the last decade at the Hess Creek study site. These findings suggest a shift in watershed hydrology associated with increasing active layer thickness. Further development of DOM optical indicators may serve as a novel and inexpensive tool for detecting permafrost degradation in northern watersheds.

Hydrological processes and permafrost regulate magnitude, source and chemical characteristics of dissolved organic carbon export in a peatland catchment of northeastern China

NASA Astrophysics Data System (ADS)

Guo, Yuedong; Song, Changchun; Tan, Wenwen; Wang, Xianwei; Lu, Yongzheng

2018-02-01

Permafrost thawing in peatlands has the potential to alter the catchment export of dissolved organic carbon (DOC), thus influencing the carbon balance and cycling in linked aquatic and ocean ecosystems. Peatlands along the southern margins of the Eurasian permafrost are relatively underexplored despite the considerable risks associated with permafrost degradation due to climate warming. This study examined dynamics of DOC export from a permafrost peatland catchment located in northeastern China during the 2012 to 2014 growing seasons. The estimated annual DOC loads varied greatly between 3211 and 19 022 kg yr-1, with a mean DOC yield of 4.7 g m-2 yr-1. Although the estimated DOC yield was in the lower range compared with other permafrost regions, it was still significant for the net carbon balance in the studied catchment. There were strong linkages between daily discharge and DOC concentrations in both wet and dry years, suggesting a transport-limited process of DOC delivery from the catchment. Discharge explained the majority of both seasonal and interannual variations of DOC concentrations, which made annual discharge a good indicator of total DOC load from the catchment. As indicated by three fluorescence indices, DOC source and chemical characteristics tracked the shift of flow paths during runoff processes closely. Interactions between the flow path and DOC chemical characteristics were greatly influenced by the seasonal thawing of the soil active layer. The deepening of the active layer due to climate warming likely increases the proportion of microbial-originated DOC in baseflow discharge.

The Canadian Experiment for Freeze/Thaw in 2012 or 2013 CanEx-FT12 or FT13

NASA Technical Reports Server (NTRS)

Belair, Stephane; Bernier, Monique; Colliander, Andreas; Jackson, Thomas; McDonald, Kyle; Walker, Anne

2011-01-01

General objectives of the experiment are: Pre-launch Calibration/Validation of SMAP Freeze/Thaw products and retrieval algorithms and rehearsal for Soil Moisture Active-Passive (SMAP) post launch validation. The basis of the radar freeze-thaw measurement is the large shift in dielectric constant and backscatter (dB) between predominantly frozen & thawed conditions. The Dielectric constant of liquid water varies with frequency, whereas that of pure ice is constant

Poorly known microbial taxa dominate the microbiome of permafrost thaw ponds.

PubMed

Wurzbacher, Christian; Nilsson, R Henrik; Rautio, Milla; Peura, Sari

2017-08-01

In the transition zone of the shifting permafrost border, thaw ponds emerge as hotspots of microbial activity, processing the ancient carbon freed from the permafrost. We analyzed the microbial succession across a gradient of recently emerged to older ponds using three molecular markers: one universal, one bacterial and one fungal. Age was a major modulator of the microbial community of the thaw ponds. Surprisingly, typical freshwater taxa comprised only a small fraction of the community. Instead, thaw ponds of all age classes were dominated by enigmatic bacterial and fungal phyla. Our results on permafrost thaw ponds lead to a revised perception of the thaw pond ecosystem and their microbes, with potential implications for carbon and nutrient cycling in this increasingly important class of freshwaters.

Hydro-thermal processes and thermal offsets of peat soils in the active layer in an alpine permafrost region, NE Qinghai-Tibet plateau

NASA Astrophysics Data System (ADS)

Wang, Qingfeng; Jin, Huijun; Zhang, Tingjun; Cao, Bin; Peng, Xiaoqing; Wang, Kang; Xiao, Xiongxin; Guo, Hong; Mu, Cuicui; Li, Lili

2017-09-01

Observation data of the hydrothermal processes in the active layer are vital for the verification of permafrost formation and evolution, eco-hydrology, ground-atmosphere interactions, and climate models at various time and spatial scales. Based on measurements of ground temperatures in boreholes, of temperatures and moisture contents of soils in the active layer, and of the mean annual air temperatures at the Qilian, Yeniugou and Tuole meteorological stations in the upper Heihe River Basin (UHRB) and the adjacent areas, a series of observations were made concerning changes in the lower limit of permafrost (LLP) and the related hydrothermal dynamics of soils in the active layer. Because of the thermal diode effect of peat soils, the LLP (at 3600 m) was lower on the northern slope of the Eboling Mountains at the eastern branch of the UHRB than that (at 3650-3700 m) on the alluvial plain at the western branch of the UHRB. The mean temperature of soils at depths of 5 to 77 cm in the active layer on peatlands was higher during periods with subzero temperatures and lower during periods with above-zero temperatures in the vicinity of the LLP on the northern slope of the Eboling Mountains than those at the LLP at the western branch of the UHRB. The thawing and downward freezing rates of soils in the active layer near the LLP on the northern slope of the Eboling Mountains were 0.2 and 1.6 times those found at the LLP at the western branch of the UHRB. From early May to late August, the soil water contents at the depths of 20 to 60 cm in the active layer near the LLP on the northern slope of the Eboling Mountains were significantly lower than those found at the LLP at the western branch of the UHRB. The annual ranges of soil temperatures (ARSTs), mean annual soil temperatures (MASTs) in the active layer on peatlands, and the mean annual ground temperature (MAGT) at a depth of 14 m of the underlying permafrost were all significantly lower near the LLP on the northern slope of the Eboling Mountains. Moreover, the thermophysical properties of peat soils and high moisture contents in the active layer on peatlands resulted in the lower soil temperatures in the active layer close to the LLP on the northern slope of the Eboling Mountains than those found at the LLP at the western branch of the UHRB in the warm season, especially at the deeper depths (20-77 cm). They also resulted in the smaller freezing index (FI) and thawing index (TI) and larger FI/TI ratios of soils at the depths of 5 to 77 cm in the active layer near the LLP on the northern slope of the Eboling Mountains. In short, peatlands have unique thermophysical properties for reducing heat absorption in the warm season and for limiting heat release in the cold season as well. However, the permafrost zone has shrunk by 10-20 km along the major highways at the western branch of the UHRB since 1985, and a medium-scale retrogressive slump has occurred on the peatlands on the northern slope of the Eboling Mountains in recent decades. The results can provide basic data for further studies of the hydrological functions of different landscapes in alpine permafrost regions. Such studies can also enable evaluations and forecasts the hydrological impacts of changing frozen ground in the UHRB and of other alpine mountain regions in West China.

Comparison of Cryopreservation Protocols (Single and Two-steps) and Thawing (Fast and Slow) for Canine Sperm.

PubMed

Brito, Maíra M; Lúcio, Cristina F; Angrimani, Daniel S R; Losano, João Diego A; Dalmazzo, Andressa; Nichi, Marcílio; Vannucchi, Camila I

2017-01-02

In addition to the existence of several cryopreservation protocols, no systematic research has been carried out in order to confirm the suitable protocol for canine sperm. This study aims to assess the effect of adding 5% glycerol during cryopreservation at 37°C (one-step) and 5°C (two-steps), in addition of testing two thawing protocols (37°C for 30 seconds, and 70°C for 8 seconds). We used 12 sperm samples divided into four experimental groups: Single-Step - Slow Thawing Group; Two-Step - Slow Thawing Group; Single-Step - Fast Thawing Group; and Two-Step - Fast Thawing Group. Frozen-thawed samples were submitted to automated analysis of sperm motility, evaluation of plasmatic membrane integrity, acrosomal integrity, mitochondrial activity, sperm morphology, sperm susceptibility to oxidative stress, and sperm binding assay to perivitellinic membrane of chicken egg yolk. Considering the comparison between freezing protocols, no statistical differences were verified for any of the response variables. When comparison between thawing protocols was performed, slow thawing protocol presented higher sperm count bound to perivitelline membrane of chicken egg yolk, compared to fast thawing protocol. Regardless of the freezing process, the slow thawing protocol can be recommended for the large scale cryopreservation of canine semen, since it shows a consistent better functional result.

Dynamics of Active Layer Depth across Alaskan Tundra Ecosystems

NASA Astrophysics Data System (ADS)

Ma, C.; Zhang, X.; Song, X.; Xu, X.

2016-12-01

The thickness of the active layer, near-surface layer of Earth material above permafrost undergoing seasonal freezing and thawing, is of considerable importance in high-latitude environments because most physical, chemical, and biological processes in the permafrost region take place within it. The dynamics of active layer thickness (ALT) result from a combination of various factors including heat transfer, soil water content, soil texture, root density, stem density, moss layer thickness, organic layer thickness, etc. However, the magnitude and controls of ALT in the permafrost region remain uncertain. The purpose of this study is to improve our understanding of the dynamics of ALT across Alaskan tundra ecosystems and their controls at multiple scales, ranging from plots to entire Alaska. This study compiled a comprehensive dataset of ALT at site and regional scales across the Alaskan tundra ecosystems, and further analyzed ALT dynamics and their hierarchical controls. We found that air temperature played a predominant role on the seasonality of ALT, regulated by other physical and chemical factors including soil texture, moisture, and root density. The structural equation modeling (SEM) analysis confirmed the predominant role of physical controls (dominated by heat and soil properties), followed by chemical and biological factors. Then a simple empirical model was developed to reconstruct the ALT across the Alaska. The comparisons against field observational data show that the method used in this study is robust; the reconstructed time-series ALT across Alaska provides a valuable dataset source for understanding ALT and validating large-scale ecosystem models.

The transcriptional response of microbial communities in thawing Alaskan permafrost soils.

PubMed

Coolen, Marco J L; Orsi, William D

2015-01-01

Thawing of permafrost soils is expected to stimulate microbial decomposition and respiration of sequestered carbon. This could, in turn, increase atmospheric concentrations of greenhouse gasses, such as carbon dioxide and methane, and create a positive feedback to climate warming. Recent metagenomic studies suggest that permafrost has a large metabolic potential for carbon processing, including pathways for fermentation and methanogenesis. Here, we performed a pilot study using ultrahigh throughput Illumina HiSeq sequencing of reverse transcribed messenger RNA to obtain a detailed overview of active metabolic pathways and responsible organisms in up to 70 cm deep permafrost soils at a moist acidic tundra location in Arctic Alaska. The transcriptional response of the permafrost microbial community was compared before and after 11 days of thaw. In general, the transcriptional profile under frozen conditions suggests a dominance of stress responses, survival strategies, and maintenance processes, whereas upon thaw a rapid enzymatic response to decomposing soil organic matter (SOM) was observed. Bacteroidetes, Firmicutes, ascomycete fungi, and methanogens were responsible for largest transcriptional response upon thaw. Transcripts indicative of heterotrophic methanogenic pathways utilizing acetate, methanol, and methylamine were found predominantly in the permafrost table after thaw. Furthermore, transcripts involved in acetogenesis were expressed exclusively after thaw suggesting that acetogenic bacteria are a potential source of acetate for acetoclastic methanogenesis in freshly thawed permafrost. Metatranscriptomics is shown here to be a useful approach for inferring the activity of permafrost microbes that has potential to improve our understanding of permafrost SOM bioavailability and biogeochemical mechanisms contributing to greenhouse gas emissions as a result of permafrost thaw.

The transcriptional response of microbial communities in thawing Alaskan permafrost soils

PubMed Central

Coolen, Marco J. L.; Orsi, William D.

2015-01-01

Thawing of permafrost soils is expected to stimulate microbial decomposition and respiration of sequestered carbon. This could, in turn, increase atmospheric concentrations of greenhouse gasses, such as carbon dioxide and methane, and create a positive feedback to climate warming. Recent metagenomic studies suggest that permafrost has a large metabolic potential for carbon processing, including pathways for fermentation and methanogenesis. Here, we performed a pilot study using ultrahigh throughput Illumina HiSeq sequencing of reverse transcribed messenger RNA to obtain a detailed overview of active metabolic pathways and responsible organisms in up to 70 cm deep permafrost soils at a moist acidic tundra location in Arctic Alaska. The transcriptional response of the permafrost microbial community was compared before and after 11 days of thaw. In general, the transcriptional profile under frozen conditions suggests a dominance of stress responses, survival strategies, and maintenance processes, whereas upon thaw a rapid enzymatic response to decomposing soil organic matter (SOM) was observed. Bacteroidetes, Firmicutes, ascomycete fungi, and methanogens were responsible for largest transcriptional response upon thaw. Transcripts indicative of heterotrophic methanogenic pathways utilizing acetate, methanol, and methylamine were found predominantly in the permafrost table after thaw. Furthermore, transcripts involved in acetogenesis were expressed exclusively after thaw suggesting that acetogenic bacteria are a potential source of acetate for acetoclastic methanogenesis in freshly thawed permafrost. Metatranscriptomics is shown here to be a useful approach for inferring the activity of permafrost microbes that has potential to improve our understanding of permafrost SOM bioavailability and biogeochemical mechanisms contributing to greenhouse gas emissions as a result of permafrost thaw. PMID:25852660

A practical algorithm to estimate soil thawing onset with the soil moisture active passive (SMAP) data

NASA Astrophysics Data System (ADS)

Chen, X.; Liu, L.

2016-12-01

The Soil Moisture Active Passive (SMAP) satellite simultaneously collected active and passive microwave data at L-band from April to July, 2015. The L-band radiometer brightness temperature (TB) data are strongly sensitive to the change of soil moisture, therefore, can be used to estimate freeze/thaw state of soil. We applied an edge detection method to detect the onset of thawing based on the SMAP level-1C TB data. This method convolves the first derivative of the Gaussian function as a kernel with the TB time series. When thawing occurs, soil moisture increases abruptly and leads to a decrease in TB. Therefore, a primary thaw event can be identified when the convolved signal reaches a local minimum. Considering the noise of the radiometer data, not all local minimums correspond to a thaw event. Therefore, we further applied a filter based on a priori or in situ soil temperature observation to eliminate false events. We compared the TB-based estimates with in situ measurements of soil temperature, moisture, and snow depth from April to June from 5 SNOTEL sites in Alaska. Our results show that at 4 out of the 5 sites the estimated thawing onsets and in-situ data agree within 5 to 10 days. However, we found a distinct inconsistency of 41 days at the fifth site. One possible reason is the mismatch in spatial coverage: one pixel of SMAP radiometer data has a size of 36 km, within which different areas may have different freeze/thaw states. The SMAP radar backscatter coefficient (σ0) data are also very sensitive to soil moisture, and has finer spatial resolution of 1 km, making it more directly comparable with the in situ measurements. We applied a seasonal threshold method to estimate thawing onset based on this data. Firstly, we set a thaw onset based on the in situ soil temperature and moisture measurements at 5 cm depth. Then we averaged σ0 observations from April 14th to 7 days before the thaw onset to represent the frozen soil, and used the mean value from 7 days after the thawing onset to June 1st as thawed reference. Next, the σ0-based freeze/thaw distribution within radiometer pixel can be obtained. Assuming TB and have a linear relationship in 36 km scale during a short time, SMAP provide a down scaling method to obtain 9 km resolution TB data. For further work, we plan to apply the edge detection method on this TB data to estimate the soil state in 9 km.

Method for Differentiation between Fresh and Frozen-thawed Fish

NASA Astrophysics Data System (ADS)

Kitamikado, Manabu; Yoshioka, Keiko

In Japan fresh fish has a much higher market price than that for frozen-thawed fish. However, a large number of frozen-thawed fish are sold without being differentiated from fresh fish. We discuss here the differentiation methods described in literatures and our works in the search for such a method. We used the opacity of crystalline lens and the destruction of red blood cells as the index for the differentiation, in addition to the activity of neutral β-N-acetylglucosaminidase in blood. Thus, a fluorometric method and a rapid paper test method were developed based on measurement of the activity of this enzyme. This enzyme, found in fish red blood cells, was inactive in intact cells but was activated when cells were disrupted by freezing, and thawing. Both methods were applicable for testing most commom edible fish prior to filleting and required about 20 min using a UV-lamp.

Soil Variable Permeability and Water Phase Change Dynamics in a Wastewater Spray Irrigation Agricultural System Located in a Seasonably Cold Climate

NASA Astrophysics Data System (ADS)

Darnault, C. J. G.; Daniel, T. J.; Billy, G.; Hopkins, I.; Guo, L.; Jin, Z.; Gall, H. E.; Lin, H.

2017-12-01

The permeability of the upper meter of soils in frozen conditions, commonly referred to as the active layer, can vary exponentially given the time of year. Variable moisture contents along with temperature, radiation, and slope angle of the soil surface can result in variable depths of frozen soils, which can cause the formation of low permeability ice lenses well into the spring thaw period. The wastewater irrigation site known as the "Living Filter" located in State College, PA has been in continuous operation since 1962. On average 5500 m3/day of wastewater is applied to the site annually, even in the winter months when average temperatures can dip as low as -7 °C during the month of January. The Living Filter is not permitted to discharge to surface water and is intended to recharge the Spring Creek basin that directly underlies the site, therefore runoff from the site is not permitted. We hypothesize that water infiltrates the upper meter of the subsurface during the winter in several different ways such as preferential pathways in the ice layer created by plant stems and weak patches of ice thawed by the warm wastewater. 2D conceptual models of the phase change between ice and water in the soil were created in order to predict soil permeability and its change in temperature. The 2D conceptual models can be correlated between observed soil moisture content and soil temperature data in order to validate the model given spray irrigation and weather patterns. By determining the permeability of the frozen soils, irrigation practices can be adjusted for the winter months so as to reduce the risk of any accidental wastewater runoff. The impact of this study will result in a better understanding of the multiphase dynamics of the active layer and their implication on soil hydrology at the Living Filter and other seasonally frozen sites.

Sedimentary Fabrics of Stratified Slope Deposits at a Site near Hoover's Camp, Shenandoah National Park, Virginia

USGS Publications Warehouse

Smoot, Joseph P.

2004-01-01

An outcrop of stratified slope deposits in Shenandoah National Park is described in detail. The Pleistocene age deposits are comprised of a mixture of clay to cobbles defining a series of offlapping wedges. Elongate clasts are oriented parallel to wedge boundaries except at the toe of the wedge, where they are oriented nearly vertical. The wedges represent sedimentation by freeze-thaw of ground ice. Thin layers of pebbly sand separate matrix-rich wedge deposits, which represent sheetfloods during periods of thaw. Thicker sand layers and lenses of clay are placed upslope of coarse-grained wedge fronts. This association represents ponding of water around the solifluction lobe topography during warm periods. Stratified slope deposits at an outcrop at a higher elevation lack the sandy sheetflood and pond deposits, whereas sheetflood fabrics dominate deposits at a lower elevation. These variations are attributed to differences in temperature at the different elevations.

Effect of freeze-thaw cycles on greenhouse gas fluxes from peat soils

NASA Astrophysics Data System (ADS)

Oh, H. D.; Rezanezhad, F.; Markelov, I.; McCarter, C. P. R.; Van Cappellen, P.

2017-12-01

The ongoing displacement of climate zones by global warming is increasing the frequency and intensity of freeze-thaw cycles in middle and high latitude regions, many of which are dominated by organic soils such as peat. Repeated freezing and thawing of soils changes their physical properties, geochemistry, and microbial community structure, which together govern the biogeochemical cycling of carbon and nutrients. In this presentation, we focus on how freeze-thaw cycles influence greenhouse gas fluxes from peat using a newly developed experimental soil column system that simulates realistic soil temperature profiles during freeze-thaw cycles. We measured the surface and subsurface changes to gas and aqueous phase chemistry to delineate the diffusion pathways and quantify soil greenhouse gas fluxes during freeze-thaw cycles using sulfur hexafluoride (SF6) as a conservative tracer. Three peat columns were assembled inside a temperature controlled chamber with different soil structures. All three columns were packed with 40 cm of undisturbed, slightly decomposed peat, where the soil of two columns had an additional 10 cm layer on top (one with loose Sphagnum moss and one with an impermeable plug). The results indicate that the release of SF6 and CO2 gas from the soil surface was influenced by the recurrent development of a physical ice barrier, which prevented gas exchange between the soil and atmosphere during freezing conditions. With the onset of thawing a pulse of SF6 and CO2 occurred, resulting in a flux of 3.24 and 2095.52 µmol/m2h, respectively, due to the build-up of gases in the liquid-phase pore space during freezing. Additionally, we developed a model to determine the specific diffusion coefficients for each peat column. These data allow us to better predict how increased frequency and intensity of freeze-thaw cycles will affect greenhouse gas emissions in northern peat soils.

CO2, CH4, and DOC Flux During Long Term Thaw of High Arctic Tundra

NASA Astrophysics Data System (ADS)

Stackhouse, B. T.; Vishnivetskaya, T. A.; Layton, A.; Bennett, P.; Mykytczuk, N.; Lau, C. M.; Whyte, L.; Onstott, T. C.

2013-12-01

Arctic regions are expected to experience temperature increases of >4° C by the end of this century. This warming is projected to cause a drastic reduction in the extent of permafrost at high northern latitudes, affecting an estimated 1000 Pg of SOC in the top 3 m. Determining the effects of this temperature change on CO2 and CH4 emissions is critical for defining source constraints to global climate models. To investigate this problem, 18 cores of 1 m length were collected in late spring 2011 before the thawing of the seasonal active layer from an ice-wedge polygon near the McGill Arctic Research Station (MARS) on Axel Heiberg Island, Nunavut, Canada (N79°24, W90°45). Cores were collected from acidic soil (pH 5.5) with low SOC (~1%), summertime active layer depth between 40-70 cm (2010-2013), and sparse vegetation consisting primarily of small shrubs and sedges. Cores were progressively thawed from the surface over the course of 14 weeks to a final temperature of 4.5° C and held at that temperature for 15 months under the following conditions: in situ water saturation conditions versus fully water saturated conditions using artificial rain fall, surface light versus no surface light, cores from the polygon edge, and control cores with a permafrost table maintained at 70 cm depth. Core headspaces were measured weekly for CO2, CH4, H2, CO, and O2 flux during the 18 month thaw experiment. After ~20 weeks of thawing maximum, CO2 flux for the polygon edge and dark treatment cores were 3.0×0.7 and 1.7×0.4 mmol CO2 m-2 hr-1, respectively. The CO2 flux for the control, saturated, and in situ saturation cores reached maximums of 0.6×0.2, 0.9×0.5, and 0.9×0.1 mmol CO2 m-2 hr-1, respectively. Field measurements of CO2 flux from an adjacent polygon during the mid-summer of 2011 to 2013 ranged from 0.3 to 3.7 mmol CO2 m-2 hr-1. Cores from all treatments except water saturated were found to consistently oxidize CH4 at ~atmospheric concentrations (2 ppmv) with a maximum rate of -196×12 (dark) nmol CH4 m-2 hr-1. Saturated cores occasionally acted as slight CH4 sources (17×17 nmol CH4 m-2 hr-1) but were generally found to still behave as CH4 sinks (maximum rate -93×56 nmol CH4 m-2 hr-1). Dissolved CH4 in the permafrost pore water immediately upon thaw was ~0.5 μM in all treatments, and remained at this concentration in the saturated cores. In in situ water saturation treatments, however, pore water CH4 concentrations decreased from 0.6×0.3 μM to 0.2×0.1 μM over the course of three weeks without release into the core headspace. This is likely due to aerobic methanotrophy, as the concentration of genomic sequences associated with methanotrophic bacteria was found to be 30 times greater in the upper 60 cm than in the permafrost. Sustained concentrations of CH4 in the deeper portion of saturated cores indicated that methanogenesis is occurring at depths near and below the permafrost table. Measurements of in situ DOC were 0.22×0.05 mmol L-1, whereas core DOC values increased to a maximum of >1.7 mmol L-1 (primarily acetate) during the course of the thawing experiment. These findings indicate that in a warming Arctic, even under various hydrological regimes, these soil types will be able to act as a sink of atmospheric CH4, a moderate source of CO2 and a potential source for DOC.

Evaluation of Spaceborne L-band Radiometer Measurements for Terrestrial Freeze/Thaw Retrievals in Canada

NASA Technical Reports Server (NTRS)

Roy, A.; Royer, A.; Derksen, C.; Brucker, L.; Langlois, A.; Mailon, A.; Kerr, Y.

2015-01-01

The landscape freeze/thaw (FT) state has an important impact on the surface energy balance, carbon fluxes, and hydrologic processes; the timing of spring melt is linked to active layer dynamics in permafrost areas. L-band (1.4 GHz) microwave emission could allow the monitoring of surface state dynamics due to its sensitivity to the pronounced permittivity difference between frozen and thawed soil. The aim of this paper is to evaluate the performance of both Aquarius and Soil Moisture and Ocean Salinity (SMOS) L-band passive microwave measurements using a polarization ratio-based algorithm for landscape FT monitoring. Weekly L-band satellite observations are compared with a large set of reference data at 48 sites across Canada spanning three environments: tundra, boreal forest, and prairies. The reference data include in situ measurements of soil temperature (Tsoil) and air temperature (Tair), and Moderate Resolution Imaging Spectroradiometer (MODIS) land surface temperature (LST) and snow cover area (SCA) products. Results show generally good agreement between Lband FT detection and the surface state estimated from four reference datasets. The best apparent accuracies for all seasons are obtained using Tair as the reference. Aquarius radiometer 2 (incidence angle of 39.6) data gives the best accuracies (90.8), while for SMOS the best results (87.8 of accuracy) are obtained at higher incidence angles (55- 60). The FT algorithm identifies both freeze onset and end with a delay of about one week in tundra and two weeks in forest and prairies, when compared to Tair. The analysis shows a stronger FT signal at tundra sites due to the typically clean transitions between consistently frozen and thawed conditions (and vice versa) and the absence of surface vegetation. Results in the prairies were poorer because of the influence of vegetation growth in summer (which decreases the polarization ratio) and the high frequency of ephemeral thaw events during winter. Freeze onset and end maps created from the same algorithm applied to SMOS and Aquarius measurements characterize similar FT patterns over Canada. This study shows the potential of using L-band spaceborne observations for FT monitoring, but underlines some limitations due to ice crusts in the snowpack, liquid water content in snow cover during the spring freeze to thaw transition, and vegetation growth.

Methane and Carbon Dioxide Emissions during the Seasonal Permafrost Thaw at the Bonanza Creek Research Forest: Results from the May 2016 Field Campaign

NASA Astrophysics Data System (ADS)

Wilson, E. L.; DiGregorio, A.; Carter, L. M.; Euskirchen, E. S.; Edgar, C.; Hoffman, C.; Ramanathan, A. K.; Mao, J.; Duncan, B. N.; Ott, L. E.; Liang, Q.; Melocik, K. A.; Tucker, C. J.

2016-12-01

We present field measurements from a May 2016 campaign funded under NASA's Interdisciplinary Science (IDS) program to track methane (CH4) and carbon dioxide (CO2) emissions above thawing permafrost at three sites near Fairbanks, AK. Each of the sites, located in the Bonanza Creek Research Forest, represent a different ecosystem including black spruce with cold soils and stable permafrost, collapse scar bog with thermokarst formation, and a site with moderately rich fen lacking near surface permafrost. Field experiments were carried out in May during the seasonal ground thaw of the active layer. Measurements included permafrost depth and subsurface structure using ground penetrating radar, meteorological variables (air and soil temperature, net radiation, albedo, precipitation, snow depth, vapor pressure, etc.), eddy covariance data from a 3-D sonic anemometer, and surface and column concentrations of CH4 and CO2 with an open-path infrared gas analyzer (LICOR) and Miniaturized Laser Heterodyne Radiometer (Mini-LHR) respectively. We have referred to this effort as a pilot study because our intent is to expand our observational network in the future to other sites in North America, which will aid in the monitoring of changes in GHG emissions in the Arctic as well as complement and help interpret data collected by space-borne instruments, such as GOSAT, IASI, and AIRS. This is the first time that these types of measurements have been combined to provide a holistic view of the evolution of, and the atmospheric response to permafrost thaw. The final year of this effort will focus on estimating a global source of GHG emissions from thawing permafrosts. We will use MODIS and Landsat-8 Operational Land Imager and Thermal Infrared Sensor data to "scale up" the data collected at the three sites on the basis of land surface type information. Based on the data collected at the three sites and a variety of existing satellite data sets, we will develop a computationally-efficient parameterization of emissions from thawing permafrosts for use in the NASA GEOS-5 Atmospheric General Circulation Model (AGCM), thus benefiting ongoing efforts in the NASA Global Modeling and Assimilation Office (GMAO) to build an Earth System Model which is used for both retrospective and predictive simulations of important GHGs.

Experimental Edema Disease of Swine (E. Coli ENTEROTOXEMIA) I. Detection and Preparation of an Active Principle

PubMed Central

Clugston, R. E.; Nielsen, N. O.

1974-01-01

Freeze-thaw lysates prepared from strains of Escherichia coli belonging to serogroups O138, O139, and O141 contained a principle (edema disease principle) which induced edema disease in swine. All freeze-thaw lysates contained endotoxic activity that tended to obscure the edema disease syndrome and methods were developed to reduce such activity. Freeze-thaw lysates prepared from E. coli O139 induced the most characteristic edema disease syndrome. Partially purified edema disease principle prepared from O139 freeze-thaw lysates by sequential precipitation with ammonium sulphate and streptomycin sulphate had increased specific activity with markedly reduced endotoxic activity. This material was insoluble at acidic pH but readily soluble at alkaline pH. The effective molecular weight of edema disease principle, based on retention and filtration properties of diaflo membranes, appeared to be greater than 50,000 and less than 100,000. The biological activity of edema disease principle was thermolabile. Sodium deoxycholate treatment of edema disease principle further reduced endotoxic activity. A thermolabile, ammonium sulphate precipitable material was prepared from E. coli O139 that induced a predictable syndrome which resembled edema disease clinically and pathologically following intravenous inoculation in pigs. PMID:4272954

Molecular investigations into a globally important carbon pool: Permafrost-protected carbon in Alaskan soils

USGS Publications Warehouse

Waldrop, M.P.; Wickland, K.P.; White, Rickie; Berhe, A.A.; Harden, J.W.; Romanovsky, V.E.

2010-01-01

The fate of carbon (C) contained within permafrost in boreal forest environments is an important consideration for the current and future carbon cycle as soils warm in northern latitudes. Currently, little is known about the microbiology or chemistry of permafrost soils that may affect its decomposition once soils thaw. We tested the hypothesis that low microbial abundances and activities in permafrost soils limit decomposition rates compared with active layer soils. We examined active layer and permafrost soils near Fairbanks, AK, the Yukon River, and the Arctic Circle. Soils were incubated in the lab under aerobic and anaerobic conditions. Gas fluxes at -5 and 5 ??C were measured to calculate temperature response quotients (Q10). The Q10 was lower in permafrost soils (average 2.7) compared with active layer soils (average 7.5). Soil nutrients, leachable dissolved organic C (DOC) quality and quantity, and nuclear magnetic resonance spectroscopy of the soils revealed that the organic matter within permafrost soils is as labile, or even more so, than surface soils. Microbial abundances (fungi, bacteria, and subgroups: methanogens and Basidiomycetes) and exoenzyme activities involved in decomposition were lower in permafrost soils compared with active layer soils, which, together with the chemical data, supports the reduced Q10 values. CH4 fluxes were correlated with methanogen abundance and the highest CH4 production came from active layer soils. These results suggest that permafrost soils have high inherent decomposability, but low microbial abundances and activities reduce the temperature sensitivity of C fluxes. Despite these inherent limitations, however, respiration per unit soil C was higher in permafrost soils compared with active layer soils, suggesting that decomposition and heterotrophic respiration may contribute to a positive feedback to warming of this eco region. Published 2010. This article is a US Government work and is in the public domain in the USA.

Seasonal and spatial variation in soil chemistry and anaerobic processes in an Arctic ecosystem

NASA Astrophysics Data System (ADS)

Lipson, D.; Mauritz, M.; Bozzolo, F.; Raab, T. K.; Santos, M. J.; Friedman, E. F.; Rosenbaum, M.; Angenent, L.

2009-12-01

Drained thaw lake basins (DTLB) are the dominant landform in the Arctic coastal plain near Barrow, Alaska. Our previous work in a DTLB showed that Fe(III) and humic substances are important electron acceptors in anaerobic respiration, and play a significant role in the C cycle of these organic-rich soils. In the current study, we investigated seasonal and spatial patterns of availability of electron acceptors and labile substrate, redox conditions and microbial activity. Landscapes within DTLB contain complex, fine-scale topography arising from ice wedge polygons, which produce raised and lowered areas. One goal of our study was to determine the effects of microtopographic variation on the potential for Fe(III) reduction and other anaerobic processes. Additionally, the soil in the study site has a complex vertical structure, with an organic peat layer overlying a mineral layer, overlying permafrost. We described variations in soil chemistry across depth profiles into the permafrost. Finally, we installed an integrated electrode/potentiostat system to electrochemically monitor microbial activity in the soil. Topographically low areas differed from high areas in most of the measured variables: low areas had lower oxidation-reduction potential, higher pH and electrical conductivity. Soil pore water from low areas had higher concentrations of Fe(III), Fe(II), dissolved organic C (DOC), and aromaticity (UV absorbance at 260nm, “A260”). Low areas also had higher concentrations of dissolve CO2 and CH4 in soil pore water. Laboratory incubations of soil showed a trend toward higher potentials for Fe(III) reduction in topographically low areas. Clearly, ice wedge-induced microtopography exerts a strong control on microbial processes in this DTLB landscape, with increased anaerobic activity occurring in the wetter, depressed areas. Soil water extracted from 5-15 cm depth had higher concentrations of Fe(III), Fe(II), A260, and DOC compared to soil water sampled from 0-5cm. The soil depth profile showed highest concentrations of acid-extractable Fe in the mineral layer and permafrost, though Fe(III) was highest in the surface layer. Total and soluble C increased with depth, as did the potential for CO2 and CH4 production in anaerobic incubations. Thus, the mineral layer may be a significant source of Fe for oxidation-reduction reactions that occur at shallower depths, though methanogenesis dominates in the mineral layer, while Fe(III) reduction dominates in the organic layer. Most of the ions measured in the soil pore water (Fe(III), DOC, A260) showed the same general seasonal pattern: high concentrations soon after soils thawed, declining over time until mid-August. Concentrations of Fe(II) in soil pore water were fairly stable over time. There was a significant positive relationship between A260 and Fe(III) concentrations, possibly indicating the presence of microbially-produced aromatic chelating molecules. Potentiostat measurements confirmed the presence of an electrochemically active microbial community in the soil.

Vertical variation of a black soil's properties in response to freeze-thaw cycles and its links to shift of microbial community structure.

PubMed

Han, Ziming; Deng, Mingwen; Yuan, Anqi; Wang, Jiahui; Li, Hao; Ma, Jincai

2018-06-01

Soil freeze-thaw cycles (FTCs) change soil physical, chemical, and biological properties, however information regarding their vertical variations in response to FTCs is limited. In this work, black soil (silty loam) packed soil columns were exposed to 8 FTCs, and soil properties were determined for each of vertical layer of soil columns. The results revealed that after FTCs treatment, moisture and electrical conductivity (EC) salinity tended to increase in upper soil layers. Increments of ammonium nitrogen (NH 4 + -N) and nitrate nitrogen (NO 3 - -N) in top layers (0-10cm) were greater than those in other layers, and increments of water soluble organic carbon (WSOC) and decrease of microbial biomass carbon (MBC) in middle layers (10-20cm) were greater than those in both ends. Overall, microbial community structure was mainly influenced by soil physical properties (moisture and EC) and chemical properties (pH and WSOC). For bacterial (archaeal) and fungal communities, soil physical properties, chemical properties and their interaction explained 79.73% and 82.66% of total variation, respectively. Our results provided insights into the vertical variation of soil properties caused by FTCs, and such variation had a major impact on the change of structure and composition of soil bacterial and fungal communities. Copyright © 2017 Elsevier B.V. All rights reserved.

Transient modeling of the ground thermal conditions using satellite data in the Lena River delta, Siberia

NASA Astrophysics Data System (ADS)

Westermann, Sebastian; Peter, Maria; Langer, Moritz; Schwamborn, Georg; Schirrmeister, Lutz; Etzelmüller, Bernd; Boike, Julia

2017-06-01

Permafrost is a sensitive element of the cryosphere, but operational monitoring of the ground thermal conditions on large spatial scales is still lacking. Here, we demonstrate a remote-sensing-based scheme that is capable of estimating the transient evolution of ground temperatures and active layer thickness by means of the ground thermal model CryoGrid 2. The scheme is applied to an area of approximately 16 000 km2 in the Lena River delta (LRD) in NE Siberia for a period of 14 years. The forcing data sets at 1 km spatial and weekly temporal resolution are synthesized from satellite products and fields of meteorological variables from the ERA-Interim reanalysis. To assign spatially distributed ground thermal properties, a stratigraphic classification based on geomorphological observations and mapping is constructed, which accounts for the large-scale patterns of sediment types, ground ice and surface properties in the Lena River delta. A comparison of the model forcing to in situ measurements on Samoylov Island in the southern part of the study area yields an acceptable agreement for the purpose of ground thermal modeling, for surface temperature, snow depth, and timing of the onset and termination of the winter snow cover. The model results are compared to observations of ground temperatures and thaw depths at nine sites in the Lena River delta, suggesting that thaw depths are in most cases reproduced to within 0.1 m or less and multi-year averages of ground temperatures within 1-2 °C. Comparison of monthly average temperatures at depths of 2-3 m in five boreholes yielded an RMSE of 1.1 °C and a bias of -0.9 °C for the model results. The highest ground temperatures are calculated for grid cells close to the main river channels in the south as well as areas with sandy sediments and low organic and ice contents in the central delta, where also the largest thaw depths occur. On the other hand, the lowest temperatures are modeled for the eastern part, which is an area with low surface temperatures and snow depths. The lowest thaw depths are modeled for Yedoma permafrost featuring very high ground ice and soil organic contents in the southern parts of the delta. The comparison to in situ observations indicates that transient ground temperature modeling forced by remote-sensing data is generally capable of estimating the thermal state of permafrost (TSP) and its time evolution in the Lena River delta. The approach could hence be a first step towards remote detection of ground thermal conditions and active layer thickness in permafrost areas.

Assessment of strategies to increase chondrocyte viability in cryopreserved human osteochondral allografts: evaluation of the glycosylated hydroquinone, arbutin.

PubMed

Rosa, S C; Gonçalves, J; Judas, F; Lopes, C; Mendes, A F

2009-12-01

Allogeneic cartilage is used to repair damaged areas of articular cartilage, requiring the presence of living chondrocytes. So far, no preservation method can effectively meet that purpose. Identification of more effective cryoprotective agents (CPAs) can contribute to this goal. The aim of this study was to determine whether the glycosylated hydroquinone, arbutin, alone or in combination with low concentrations of other CPAs, has cryoprotective properties towards human articular cartilage. Human tibial plateaus were procured from multi-organ donors, with the approval of the Ethics Committee of the University Hospital of Coimbra. The tibial plateaus were treated with or without arbutin (50 or 100mM), alone or in combination with various concentrations of dimethyl sulfoxide (DMSO) and glycerol, for 0.5-1.5h/37 degrees C, then frozen at -20 degrees C and 24h later transferred to a biofreezer at -80 degrees C. Two to 3 months later, thawing was achieved by immersion in cell culture medium at 37 degrees C/1h. Chondrocyte viability was assessed before and after freeze-thawing using a colorimetric assay based on the cell's metabolic activity and fluorescent dyes to evaluate cell membrane integrity. Before freezing, chondrocyte metabolic activity was identical in all the conditions tested. After freeze-thawing, the highest activity, corresponding to 34.2+/-2.1% of that in the Fresh Control, was achieved in tibial plateaus incubated in 50mM arbutin for 1h whereas in those left untreated it was 11.1+/-4.7. Addition of DMSO and glycerol to arbutin did not increase chondrocyte viability any further. Fluorescence microscopy confirmed these results and showed that living chondrocytes were mainly restricted to the superficial cartilage layers. Arbutin seems to be an effective cryoprotective agent for osteochondral allografts with potential benefits over DMSO and glycerol.

75 FR 74684 - Notice of Final Results of Antidumping Duty Changed Circumstances Review: Certain Frozen...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-12-01

... battered shrimp. Dusted shrimp is a shrimp-based product: (1) That is produced from fresh (or thawed-from... subjected to IQF freezing immediately after application of the dusting layer. Battered shrimp is a shrimp...

Monitoring thermokarst activity and landscape change in the Eureka Sound Lowlands, Ellesmere Island, Nunavut

NASA Astrophysics Data System (ADS)

Ward, M. K.; Pollard, W. H.

2016-12-01

The Eureka Sound Lowlands is an area underlain with over 500 m of ice-rich permafrost largely composed of massive ground ice and ice wedge polygons with a thin active layer of a mean thickness of 57cm. The region has a polar desert climate, with a mean annual air temperature of -19°C, and approximately 67mm of annual precipitation (falling mostly as snow). The area has an Environment Canada Weather Station (located at Eureka at 79°59'N, 85°56'W) that has been conducting daily meteorological measurements since it was founded in 1947. The area is sensitive to increasing summer temperatures as observed during the summer of 2012: as one of the warmest summer on record, there was a three-fold increase in thermokarst (collapse of the land surface from melting ground ice) with the accelerated collapse of ice wedge polygon troughs and widespread development of retrogressive thaw slumps. This study monitors thermokarst activity within the area using air photos from 1959, 1974 and 1982, satellite imagery (WorldView2) from 2009 and 2012, and annual air surveys (since 1989). Thermokarst activity between 2013 and 2016 has been monitored in the field using a differential GPS (Global Positioning System) to survey headwall locations of retrogressive thaw slumps. The purpose of this study is to provide a detailed baseline of landscape processes to compare future landscape changes resulting from thermokarst in the area.

Effect of thawing methods on frozen semen quality of yak (Poephagus grunniens L.) bulls

PubMed Central

Borah, Binod Kumar Dutta; Deka, Bharat Chandra; Biswas, Ranjan Kumar; Chakravarty, Prithiviraj; Deori, Sourabh; Sinha, Sudip; Ahmed, Kutubuddin

2015-01-01

Aim: To evaluate different thawing temperatures and duration on the post-thaw semen quality of Indian yaks bulls. Materials and Methods: Semen ejaculates from four different yak bulls were collected using artificial vagina method and extended with tris extender containing 6.4% glycerol at 35°C, cooled gradually from 35°C to 5°C at 1°C/3 min and equilibrated at 4-5°C for 4 h and frozen in French mini straws using a programmable bio-freezer and finally stored in liquid nitrogen. Thawing of frozen semen straws was carried out using three methods i.e., 35°C for 60 s (thawing method I), 37°C for 30 s (thawing method II) and 75°C for 9 s (thawing method III). The post-thaw semen quality parameters assessed were sperm motility, percent live sperm, hypo-osmotic swelling test (HOST)-reacted sperm, acrosomal changes, and alanine aminotransferase (ALT) and aspartate aminotransferase (AST) activities in the extracellular media. Results: The percent sperm motility, total incidence of acrosomal changes, and extracellular release of AST varied significantly (p<0.01) between thawing methods but live sperm and HOST-reacted sperm did not vary significantly between thawing methods. The percent sperm motility of frozen yak semen for thawing method III was significantly (p<0.05) higher than that for thawing methods I and II, the difference between thawing methods I and II being non-significant. The critical difference test revealed that the total incidence of acrosomal changes and extracellular release of AST were significantly (p<0.05) lower when thawing was done using methods I and II than in method III. Conclusion: On the basis of the present experiment, we can conclude that barring the post-thaw sperm motility, thawing of frozen yak semen in water either at 35°C for 60 s or 37°C for 30 s gives better post-thaw semen quality than at 75°C for 09 s. PMID:27047161

The changing spatio-temporal dynamics of thaw lake development, Seward Peninsula, Alaska.

NASA Astrophysics Data System (ADS)

Cooper, Michael; Rees, Gareth; Bartsch, Annett

2014-05-01

Contemporary anthropogenic climatic warming is having an accelerated, and more pronounced effect upon Arctic regions than any other environment on Earth. Increased surface temperatures have led to widespread permafrost degradation and a shift in dynamics. One landscape manifestation of localised permafrost decay, seen to be ubiquitous across low-lying tundra regions of Alaska, Canada and Siberia, is the thermokarst lake - or 'thaw' lake. These features are seen to be truly dynamic, with a relatively rapid evolution and decay. The exact impacts of climatic perturbation on thaw lake development are in contention; however, recent studies have suggested an increased vulnerability of these features, owing to the susceptibility of the fundamental processes of initiation, expansion and drainage to climatic variation. It is often hypothesised that with current trends, thaw lakes will see a net increase in expansion rate, and areal extent, with a potential for increased drainage events. Increased permafrost thaw and thermokarst activity has also led to shifts in biogeochemical cycles, leading to an amplified release from large carbon reservoirs currently sequestered within permafrost. An example of carbon release exhibited from thaw lakes is that of methane ebullition (gas bubble formation); this has been theorised to have the potential to initiate a major positive climatic feedback leading to a continued rise in global temperatures. Due to the remote nature and large area over which these landforms occur, remotely sensed data has been widely used in order to both accurately classify features and measure change over spatially large and great temporal extents. As well as studies interpreting data collected in the visible and near-infrared spectra, studies have recently made use of radar or microwave products in order to capture imagery avoiding adverse atmospheric conditions, most notably cloud cover. Data from Envisat ASAR operating in Wide Swath Mode was acquired for this study region; however, the core of this research relied upon the analysis of the changing lake morphology using visible and near-infrared spectra from MODIS and Landsat products. This research explored: (1) intra-annual variability of freeze-thaw cycles and resultant effects on thaw lake development; and (2) the spatio-temporal trends and changing dynamism of thaw lake activity. Research presented here within suggests that although climatic trends do indeed influence widespread changes within thaw lake characteristics, site-specific phenomena of sediment type and ice-content and fluvial activity also play integral roles. Understanding and observing changing spatio-temporal dynamics, particularly on an intra-annual basis, has helped to gather more information concerning complex lake processes, and increase the understanding of permafrost decay and thaw lake development.

The Soil Moisture Active and Passive Mission (SMAP): Science and Applications

NASA Technical Reports Server (NTRS)

Entekhabi, Dara; O'Neill, Peggy; Njoku, Eni

2009-01-01

The Soil Moisture Active and Passive mission (SMAP) will provide global maps of soil moisture content and surface freeze/thaw state. Global measurements of these variables are critical for terrestrial water and carbon cycle applications. The SMAP observatory consists of two multipolarization L-band sensors, a radar and radiometer, that share a deployable-mesh reflector antenna. The combined observations from the two sensors will allow accurate estimation of soil moisture at hydrometeorological (10 km) and hydroclimatological (40 km) spatial scales. The rotating antenna configuration provides conical scans of the Earth surface at a constant look angle. The wide-swath (1000 km) measurements will allow global mapping of soil moisture and its freeze/thaw state with 2-3 days revisit. Freeze/thaw in boreal latitudes will be mapped using the radar at 3 km resolution with 1-2 days revisit. The synergy of active and passive observations enables measurements of soil moisture and freeze/thaw state with unprecedented resolution, sensitivity, area coverage and revisit.

Deglacial remobilization of permafrost carbon to sediments along the East Siberian Arctic Seas

NASA Astrophysics Data System (ADS)

Martens, J.; Wild, B.; Bröder, L.; Andersson, A.; Pearce, C.; O'Regan, M.; Jakobsson, M.; Tesi, T.; Muschitiello, F.; Sköld, M.; Semiletov, I. P.; Dudarev, O.; Gustafsson, O.

2017-12-01

Current climate change is expected to thaw large quantities of permafrost carbon (PF-C) and expose it to degradation which emits greenhouse gases (i.e. CO2 and CH4). Warming causes a gradual deepening of the seasonally thawed active layer surface of permafrost soils, but also the abrupt collapse of deeper Ice Complex Deposits (ICD), especially along Siberian coastlines. It was recently hypothesized that past warming already induced large-scale permafrost degradation after the last glacial, which ultimately amplified climate forcing. We here assess the mobilization of PF-C to East Siberian Arctic Sea sediments during these warming periods. We perform source apportionment using bulk carbon isotopes (ΔΔ14C, δ13C) together with terrestrial biomarkers (CuO-derived lignin phenols) as indicators for PF-C transfer. We apply these techniques to sediment cores (SWERUS-L2) from the Chukchi Sea (4-PC1) and the southern Lomonosov Ridge (31-PC1). We found that PF-C fluxes during the Bølling-Allerød warming (14.7 to 12.7 cal ka BP), the Younger Dryas cooling (12.7 to 11.7 cal ka BP) and the early Holocene warming (until 11 cal ka BP) were overall higher than mid and late Holocene fluxes. In the Chukchi Sea, PF-C burial was 2x higher during the deglaciation (7.2 g m-2 a-1) than in the mid and late Holocene (3.6 g m-2 a-1), and ICD were the dominant source of PF-C (79.1%). Smaller fractions originated from the active layer (9.1%) and marine sources (11.7%). We conclude that thermo-erosion of ICD released large amounts of PF-C to the Chukchi Sea, likely driven by climate warming and the deglacial sea level rise. This contrasts to earlier analyses of Laptev Sea sediments where active layer material from river transport dominated the carbon flux. Preliminary data on lignin phenol concentrations of Lomonosov Ridge sediments suggest that the postglacial remobilization of PF-C was one order of magnitude higher (10x) than during both the preceding glacial and the subsequent Holocene. We will apply source apportionments between coastal erosion of ICD and river export of active layer material for the outer East Siberian Arctic Seas. Our findings demonstrate remobilization of PF-C during past warming events and suggest that current climate change might cause a similar cascade of permafrost destabilization and, thus, accelerate climate warming.

Characteristics of sugar surfactants in stabilizing proteins during freeze-thawing and freeze-drying.

PubMed

Imamura, Koreyoshi; Murai, Katsuyuki; Korehisa, Tamayo; Shimizu, Noriyuki; Yamahira, Ryo; Matsuura, Tsutashi; Tada, Hiroko; Imanaka, Hiroyuki; Ishida, Naoyuki; Nakanishi, Kazuhiro

2014-06-01

Sugar surfactants with different alkyl chain lengths and sugar head groups were compared for their protein-stabilizing effect during freeze-thawing and freeze-drying. Six enzymes, different in terms of tolerance against inactivation because of freeze-thawing and freeze-drying, were used as model proteins. The enzyme activities that remained after freeze-thawing and freeze-drying in the presence of a sugar surfactant were measured for different types and concentrations of sugar surfactants. Sugar surfactants stabilized all of the tested enzymes both during freeze-thawing and freeze-drying, and a one or two order higher amount of added sugar surfactant was required for achieving protein stabilization during freeze-drying than for the cryoprotection. The comprehensive comparison showed that the C10-C12 esters of sucrose or trehalose were the most effective through the freeze-drying process: the remaining enzyme activities after freeze-thawing and freeze-drying increased at the sugar ester concentrations of 1-10 and 10-100 μM, respectively, and increased to a greater extent than for the other surfactants at higher concentrations. Results also indicate that, when a decent amount of sugar was also added, the protein-stabilizing effect of a small amount of sugar ester through the freeze-drying process could be enhanced. © 2014 Wiley Periodicals, Inc. and the American Pharmacists Association.

The application of refraction seismics in alpine permafrost studies

NASA Astrophysics Data System (ADS)

Draebing, Daniel

2017-04-01

Permafrost studies in alpine environments focus on landslides from permafrost-affected rockwalls, landslide deposits or periglacial sediment dynamics. Mechanical properties of soils or rocks are influenced by permafrost and changed strength properties affect these periglacial processes. To assess the effects of permafrost thaw and degradation, monitoring techniques for permafrost distribution and active-layer thaw are required. Seismic wave velocities are sensitive to freezing and, therefore, refraction seismics presents a valuable tool to investigate permafrost in alpine environments. In this study, (1) laboratory and field applications of refraction seismics in alpine environments are reviewed and (2) data are used to quantify effects of rock properties (e.g. lithology, porosity, anisotropy, saturation) on p-wave velocities. In the next step, (3) influence of environmental factors are evaluated and conclusions drawn on permafrost differentiation within alpine periglacial landforms. This study shows that p-wave velocity increase is susceptible to porosity which is pronounced in high-porosity rocks. In low-porosity rocks, p-wave velocity increase is controlled by anisotropy decrease due to ice pressure (Draebing and Krautblatter, 2012) which enables active-layer and permafrost differentiation at rockwall scale (Krautblatter and Draebing, 2014; Draebing et al., 2016). However, discontinuity distribution can result in high anisotropy effects on seismic velocities which can impede permafrost differentiation (Phillips et al., 2016). Due to production or deposition history, porosity can show large spatial differences in deposited landforms. Landforms with large boulders such as rock glaciers and moraines show highest p-wave velocity differences between active-layer and permafrost which facilitates differentiation (Draebing, 2016). Saturation with water is essential for the successful application of refraction seismics for permafrost detection and can be controlled at laboratory scale. At landform scale, saturation shows temporal and spatial variation which is partially reflected in variation of seismic velocities of the active-layer (Draebing, 2016). Environmental factors result in a high spatial variation of rock or soil properties that affect seismic velocities. However, in landforms such as rock glaciers and moraines active-layer and permafrost can be distinguished based on seismic velocities alone while p-wave velocity differences of these layers in talus slopes and debris-covered slopes decrease and, therefore, require additional geophysical techniques or boreholes for layer differentiation (Draebing, 2016). Draebing, D., Krautblatter, M. 2012. P-wave velocity changes in freezing hard low-porosity rocks: a laboratory- based time-average model. The Cryosphere 6, 1163-1174. Draebing, D. 2016. Application of refraction seismics in alpine permafrost studies: A review. Earth-Science Reviews 155, 136-152. Draebing D., Haberkorn A., Krautblatter M., Kenner R., Phillips M. 2016. Spatial and temporal snow cover variability and resulting thermal and mechanical response in a permafrost rock wall. Permafrost and Periglacial Processes. Krautblatter M., Draebing D. 2014. Pseudo 3D - P-wave refraction seismic monitoring of permafrost in steep unstable bedrock. Journal of Geophysical Research: Earth Surface 119, 287-99. Phillips M., Haberkorn A., Draebing D., Krautblatter M., Rhyner H., Kenner R. 2016. Seasonally intermittent water flow through deep fractures in an Alpine rock ridge: Gemsstock, central Swiss Alps. Cold Regions Science and Technology 125, 117-127.

Amino acid production exceeds plant nitrogen demand in Siberian tundra

NASA Astrophysics Data System (ADS)

Wild, Birgit; Eloy Alves, Ricardo J.; Bárta, Jiři; Čapek, Petr; Gentsch, Norman; Guggenberger, Georg; Hugelius, Gustaf; Knoltsch, Anna; Kuhry, Peter; Lashchinskiy, Nikolay; Mikutta, Robert; Palmtag, Juri; Prommer, Judith; Schnecker, Jörg; Shibistova, Olga; Takriti, Mounir; Urich, Tim; Richter, Andreas

2018-03-01

Arctic plant productivity is often limited by low soil N availability. This has been attributed to slow breakdown of N-containing polymers in litter and soil organic matter (SOM) into smaller, available units, and to shallow plant rooting constrained by permafrost and high soil moisture. Using 15N pool dilution assays, we here quantified gross amino acid and ammonium production rates in 97 active layer samples from four sites across the Siberian Arctic. We found that amino acid production in organic layers alone exceeded literature-based estimates of maximum plant N uptake 17-fold and therefore reject the hypothesis that arctic plant N limitation results from slow SOM breakdown. High microbial N use efficiency in organic layers rather suggests strong competition of microorganisms and plants in the dominant rooting zone. Deeper horizons showed lower amino acid production rates per volume, but also lower microbial N use efficiency. Permafrost thaw together with soil drainage might facilitate deeper plant rooting and uptake of previously inaccessible subsoil N, and thereby promote plant productivity in arctic ecosystems. We conclude that changes in microbial decomposer activity, microbial N utilization and plant root density with soil depth interactively control N availability for plants in the Arctic.

Stability of hemostatic proteins in canine fresh-frozen plasma thawed with a modified commercial microwave warmer or warm water bath.

PubMed

Pashmakova, Medora B; Barr, James W; Bishop, Micah A

2015-05-01

To compare stability of hemostatic proteins in canine fresh-frozen plasma (FFP) thawed with a modified commercial microwave warmer (MCM) or warm water bath (37°C; WWB) or at room temperature (22°C). Fresh-frozen plasma obtained from 8 canine donors of a commercial blood bank. A commercial microwave warmer was modified with a thermocouple to measure surface temperature of bags containing plasma. The MCM and a WWB were each used to concurrently thaw a 60-mL bag of plasma obtained from the same donor. Two 3-mL control aliquots of FFP from each donor were thawed to room temperature without use of a heating device. Concentrations of hemostatic proteins, albumin, and D-dimers; prothrombin time (PT); and activated partial thromboplastin time (aPTT) were determined for all samples. Significant decreases in concentrations of factors II, IX, X, XI, fibrinogen, von Willebrand factor, antithrombin, protein C, and albumin and significant increases in PT and aPTT were detected for plasma thawed with the MCM, compared with results for samples thawed with the WWB. Concentrations of factors VII, VIII, and XII were not significantly different between plasma thawed with the MCM and WWB. Concentrations of D-dimers were above the reference range for all thawed samples regardless of thawing method. No significant differences in factor concentrations were detected between control and WWB-thawed samples. Significant differences in hemostatic protein concentrations and coagulation times were detected for plasma thawed with an MCM but not between control and WWB-thawed samples. Clinical importance of these changes should be investigated.

Nitrogen availability drives priming effect by altering microbial carbon-use efficiency after permafrost thaw

NASA Astrophysics Data System (ADS)

Chen, L.; Liu, L.; Zhang, Q.; Mao, C.; Liu, F.; Yang, Y.

2017-12-01

Enhanced vegetation growth can potentially aggravate soil C loss by accelerating the decomposition of soil organic matter (SOM) ("priming effect"), thereby reinforcing the positive C-climate feedback in permafrost ecosystems. However, the degree to which priming effect alters permafrost C dynamics is expected to be modified by nitrogen (N) availability after permafrost thaw. Despite this recognition, experimental evidence for the linkage between priming effect and post-thaw N availability is still lacking. Particularly, the microbial mechanisms involved remain unknown. Here, using a thermokarst-induced natural N gradient combined with an isotope-labeled glucose and N addition experiment, we presented a strong linkage between soil N availability and priming effect in Tibetan permafrost. We observed that the magnitude of priming effect along the thaw gradient was negatively associated with soil total dissolved nitrogen (TDN) concentration. This negative effect of post-thaw N availability was further proved by a sharply reduced priming effect following mineral N supply. These two lines of evidence jointly illustrated that the priming effect along the thaw chronosequence was controlled by N availability, supporting the `N mining theory'. In contrast to the prevailing assumption, this N-regulated priming effect was independent from changes in C- or N-acquiring enzyme activities, but positively associated with the change in metabolic quotients (△SOM-qCO2), highlighting that decreased microbial metabolism efficiency rather than increased enzyme activities account for greater priming effect under reduced N availability. Taken together, these findings demonstrate that C dynamics in melting permafrost largely depends on post-thaw N availability due to its effect of retarding SOM mineralization. This C-N interaction and the relevant microbial metabolic efficiency should be considered in Earth System Models for a better understanding of soil C dynamics after permafrost thaw.

Improvement of common carp (Cyprinus carpio) sperm cryopreservation using a programable freezer.

PubMed

Bernáth, Gergely; Żarski, Daniel; Kása, Eszter; Staszny, Ádám; Várkonyi, Levente; Kollár, Tímea; Hegyi, Árpád; Bokor, Zoltán; Urbányi, Béla; Horváth, Ákos

2016-10-01

The applicability of a programmable freezer for the increased-scale cryopreservation of common carp sperm was investigated. The effect of different equilibration times, cryopreservation methods, extenders, dilution ratios, activating solutions on the post-thaw motility of common carp sperm was investigated. The suitable post-thaw storage time-interval as well as fertilizing capacity of cryopreserved sperm was also examined. The motility, curvilinear velocity (VCL) and straightness (STR) values did not decrease significantly during 60min of equilibration neither in equilibrated nor thawed groups. Motility parameters of thawed sperm were similar using a conventional cryopreservation technique using a polystyrene box [motility (33%), VCL (47μm/s) and STR (88%)] and a programmable freezer: [motility (32%), VCL (54μm/s) and STR (89%)]. The highest motility and VCL was measured with a sugar based extender (grayling extender) at a ratio 1:9 (motility: 52%, VCL: 76μm/s) and 1:20 (motility: 49%, VCL: 76μm/s). The activating solution for cyprinids (ASC) could prolong sperm movement up for 2min. A storage time of six hours following thawing did not have a significant effect on the motility parameters of thawed carp sperm. Agglutination was observed during cryopreservation of an elevated volume of sperm whereas motility 47%, VCL 62μm/s and STR 91% were measured after thawing. Fertilization rate with thawed sperm (32%) was significantly lower compared to the control group (73%). According to our results, the developed method using a programmable freezer is suitable for the cryopreservation of elevated number of straws. However, carp sperm agglutination during freezing may have a negative effect on the fertilizing capacity. Copyright © 2016 Elsevier Inc. All rights reserved.

Integrating remote sensing, field observations, and ground temperature modeling to help address permafrost-related societal challenges around native village of Telida, Interior Alaska

NASA Astrophysics Data System (ADS)

Panda, S. K.; Kholodov, A. L.; Romanovsky, V. E.; Hanson, T.

2017-12-01

The dramatic landscape changes caused by thawing permafrost are wreaking havoc in remote Arctic villages. These changes are directly affecting land use, subsistence access, and adding to the high cost of infrastructure maintenance in remote villages; in some instances, threatening the safety of people who practice subsistence in remote sites. The goal of this project is to study the status and distribution of near-surface permafrost surrounding the Telida village in the Upper Kuskokwim region, and ultimately forecast how permafrost distribution and temperature may evolve in the near-future to help the Telida community better prepare in addressing the engineering, environmental, and subsistence access issues that are emerging with warmer climate and degrading permafrost. We collected baseline data on permafrost distribution, ground temperature, and thaw depth around Telida village during two visits to the study site (August 2016 and 2017) and conducted snow survey in February 2017 in all major landcover types. We mapped landcover, soil, and near-surface permafrost distribution for a 30 square mile area surrounding the Telida village using SPOT pan-sharpened image products (pixel size: 2.5 m) and ground observations. We identified seven major landcover types surrounding the Telida village: Open spruce, Mixed forest, Closed spruce, Wetland, Tall shrub, Deciduous forest, and Low shrub. Open spruce is the most dominant landcover type occupying 33% of the study area. Near-surface permafrost underlies less than 53% of the study area; it is present under Open spruce (active layer thickness: 59±7 cm; permafrost surface temperature: -0.6 °C) and Low shrub landcover types (active layer thickness: 60 cm; permafrost surface temperature: -0.07 °C), sporadic under Closed spruce landcover type, and absent under other landcover types. The mean annual permafrost surface temperature ranges from 0 to -1 °C and coldest permafrost is found under Open spruce landcover type. Permafrost around Telida village is warm and at the verge of thawing. Our ground temperature modeling effort will provide critical knowledge on how permafrost status and distribution around Telida village may evolve in the near future which we hope will help the Telida community in addressing the emerging engineering, environmental, and land use challenges.

Last Decade of Changes in Ground Temperature and Active Layer Thickness in the High Canadian Arctic and in Barrow

NASA Astrophysics Data System (ADS)

Romanovsky, V. E.; Cable, W.; Walker, D. A.; Yoshikawa, K.; Marchenko, S. S.

2013-12-01

The impact of climate warming on permafrost and the potential of climate feedbacks resulting from permafrost thawing have recently received a great deal of attention. Most of the permafrost observatories in the Northern Hemisphere show substantial warming of permafrost since circa 1980-1990. The magnitude of warming has varied with location, but was typically from 0.5 to 2°C. Permafrost is already thawing within the southern part of the permafrost domain. However, recent observations documented propagation of this process northward into the continuous permafrost zone. The close proximity of the exceptionally icy soil horizons to the ground surface, which is typical for the arctic tundra biome, makes tundra surfaces extremely sensitive to the natural and human-made changes that may resulted in development of processes such as thermokarst, thermal erosion, and retrogressive thaw slumps that strongly affect the stability of ecosystems and infrastructure. In 2003-2005, three Ecological Permafrost Observatories where established in the High Canadian Arctic (Green Cabin on the Banks Island, Mould Bay on the Prince Patrick Island, and Isachsen on the Ellef Ringnes Island) as a part of the University of Alaska Fairbanks NSF funded Biocomplexity Project. These observatories represent the northern part of the North American Arctic Transect (NAAT) established as a result of this project. The climatic and ground temperature data collected at these observatories show a general warming trend similar to what has been observed at the other locations in the North American Arctic. An important result of this resent warming is a significant increase in the active layer thickness (ALT) during the last decade. For example, ALT at the Isachsen observatory increased from 0.4-0.42 m in 2005 to 0.54 m in 2012. The maximum ALT of 0.58 m was recorded in 2008. In a shallow excavation across an ice wedge at the Isachsen site, we estimated that the top of the ice wedge ice was located at 42-45 cm from the ground surface in 2005. Increase in the active layer beyond this depth triggered the melting of the upper part of the ice wedges and widespread ground settlement at this location. In our presentation we will report on the observed changes in local topography in relation to changes in ground temperature and ALT at all three mentioned sites. In 2001, a Permafrost Observatory was also established within the Barrow Environmental Observatory in Barrow, Alaska under the auspices of the International Arctic Research Center of the University of Alaska Fairbanks. Since 2001, permafrost temperature at this depth increased by 0.5°C. Most of this increase happened after 2005. A site-specific numerical model for the Barrow permafrost temperature regime was developed in the GI Permafrost Lab. The daily air temperatures and snow cover thickness during the entire period of measurements (1924-2013) at the Barrow meteorological station were used as input data. Analysis of the resulting time series will be used in this presentation to reveal the effect of changes in air temperature and in snow depth on permafrost temperature and on the active layer thickness. This will help to put our decade-long observations along NAAT into a longer time perspective.

Potential Arctic tundra vegetation shifts in response to changing temperature, precipitation and permafrost thaw

NASA Astrophysics Data System (ADS)

van der Kolk, Henk-Jan; Heijmans, Monique M. P. D.; van Huissteden, Jacobus; Pullens, Jeroen W. M.; Berendse, Frank

2016-11-01

Over the past decades, vegetation and climate have changed significantly in the Arctic. Deciduous shrub cover is often assumed to expand in tundra landscapes, but more frequent abrupt permafrost thaw resulting in formation of thaw ponds could lead to vegetation shifts towards graminoid-dominated wetland. Which factors drive vegetation changes in the tundra ecosystem are still not sufficiently clear. In this study, the dynamic tundra vegetation model, NUCOM-tundra (NUtrient and COMpetition), was used to evaluate the consequences of climate change scenarios of warming and increasing precipitation for future tundra vegetation change. The model includes three plant functional types (moss, graminoids and shrubs), carbon and nitrogen cycling, water and permafrost dynamics and a simple thaw pond module. Climate scenario simulations were performed for 16 combinations of temperature and precipitation increases in five vegetation types representing a gradient from dry shrub-dominated to moist mixed and wet graminoid-dominated sites. Vegetation composition dynamics in currently mixed vegetation sites were dependent on both temperature and precipitation changes, with warming favouring shrub dominance and increased precipitation favouring graminoid abundance. Climate change simulations based on greenhouse gas emission scenarios in which temperature and precipitation increases were combined showed increases in biomass of both graminoids and shrubs, with graminoids increasing in abundance. The simulations suggest that shrub growth can be limited by very wet soil conditions and low nutrient supply, whereas graminoids have the advantage of being able to grow in a wide range of soil moisture conditions and have access to nutrients in deeper soil layers. Abrupt permafrost thaw initiating thaw pond formation led to complete domination of graminoids. However, due to increased drainage, shrubs could profit from such changes in adjacent areas. Both climate and thaw pond formation simulations suggest that a wetter tundra can be responsible for local shrub decline instead of shrub expansion.

The effects of fire on the thermal stability of permafrost in lowland and upland black spruce forests of interior Alaska in a changing climate

Treesearch

E.E. Jafarov; V.E. Romanovsky; H. Genet; A.D. McGuire; S.S. Marchenko

2013-01-01

Fire is an important factor controlling the composition and thickness of the organic layer in the black spruce forest ecosystems of interior Alaska. Fire that burns the organic layer can trigger dramatic changes in the underlying permafrost, leading to accelerated ground thawing within a relatively short time. In this study, we addressed the following questions. (1)...

Paleoenvironmental analyses of an organic deposit from an erosional landscape remnant, Arctic Coastal Plain of Alaska

USGS Publications Warehouse

Eisner, Wendy R.; Bockheim, James G.; Hinkel, Kenneth M.; Brown, Thomas A.; Nelson, Frederick E.; Peterson, Kim M.; Jones, Benjamin M.

2005-01-01

The dominant landscape process on the Arctic Coastal Plain of northern Alaska is the formation and drainage of thaw lakes. Lakes and drained thaw-lake basins account for approximately 75% of the modern surface expression of the Barrow Peninsula. The thaw-lake cycle usually obliterates lacustrine or peat sediments from previous cycles, which could otherwise be used for paleoecological reconstruction of long-term landscape and vegetation changes. Several possible erosional remnants of a former topographic surface that predates the formation of the thaw lakes have been tentatively identified. These remnants are characterized by a higher elevation, a thick organic layer with very high ground ice content in the upper permafrost and a plant community somewhat atypical of the region. Ten soil cores were collected from one site, and one core was intensively sampled for soil organic carbon content, pollen analysis and 14C dating. The lowest level of the organic sediments represents the earliest phase of plant growth and dates to ca. 9000 cal BP. Palynological evidence indicates the presence of mesic shrub tundra (including sedge, birch, willow and heath vegetation), and microfossil indicators point to wetter eutrophic conditions during this period. Carbon accumulation was rapid due to high net primary productivity in a relatively nutrient-rich environment. These results are interpreted as the local response to ameliorating climate during the early Holocene. The middle Holocene portion of the record contains an unconformity, indicating that between 8200 and 4200 cal BP sediments were eroded from the site, presumably in response to wind activity during a drier period centered around 4500 cal BP. The modern vegetation community of the erosional remnant was established after 4200 cal BP and peat growth resumed. During the late Holocene, carbon accumulation rates (CARs) were greatly reduced in response to the combined effects of declining productivity associated with climatic cooling, and increased nutrient stress as paludification and permafrost aggradation sequestered mineral nutrients.

Effects of Enhanced Thaw Depth on the Composition of Arctic Soil Organic Matter Leachate

NASA Astrophysics Data System (ADS)

Hutchings, J.; Zhang, X.; Bianchi, T. S.; Schuur, E.; Arellano, A. R.; Liu, Y.

2016-12-01

Pan-Arctic permafrost is increasingly susceptible to thaw due to the disproportionally high rate of temperature change in high latitudes. These soils contain a globally significant quantity of organic carbon that, when thawed, interacts with the modern carbon cycle. Current research has focused on atmospheric carbon fluxes and transport by rivers and streams to continental shelves, but has overlooked the lateral flux of carbon within watershed soils, which is the primary link between terrestrial and riverine ecosystems. Understanding the effects of water movement through permafrost soils on dissolved organic carbon is critical to better modelling of lateral carbon fluxes and interpreting the resulting observed riverine carbon fluxes with applications to investigations of the past, present, and future of the pan-Arctic. We conducted a laboratory leaching experiment using active layer soils from the Eight Mile Lake region of interior Alaska. Cores were sampled into surface and deep sections. Surface sections were subjected to a three-stage leaching process using artificial rain, with cores stored frozen overnight between stages (which crudely simulated freeze-thaw mechanisms). Surface leachates were sampled for analysis and the remainder percolated through deep soils using the same three-staged approach. Measurements of surface and deep leachates were selected to characterize transport-related changes to dissolved organic matter and included dissolved organic carbon, fluorescent dissolved organic matter via excitation emission matrices, and molecular composition via Fourier transform ion cyclotron resonance mass spectrometry. Primary findings from the experiment include a net retention of 2.4 to 27% of dissolved organic carbon from surface leachates in deep soils, a net release of fluorescent dissolved organic matter from deep soils that was 43 to 106% greater than surface leachates, increased hydrophobicity during stage three of leaching, and the preferential leaching of lignin- and tannin-like formulas from deep soils, consistent with fluorescence measurements.

Paleoenvironmental analyses of an organic deposit from an erosional landscape remnant, Arctic Coastal Plain of Alaska

DOE Office of Scientific and Technical Information (OSTI.GOV)

Eisner, W R; Bockheim, J G; Hinkel, K M

2005-01-02

The dominant landscape process on the Arctic Coastal Plain of northern Alaska is the formation and drainage of thaw lakes. Lakes and drained thaw lake basins account for approximately 75% of the modern surface expression of the Barrow Peninsula. The thaw lake cycle usually obliterates lacustrine or peat sediments from previous cycles which could otherwise be used for paleoecological reconstruction of long-term landscape and vegetation changes. Several possible erosional remnants of a former topographic surface that predates the formation of the thaw lakes have been tentatively identified. These remnants are characterized by a higher elevation, a thick organic layer withmore » very high ground ice content in the upper permafrost, and a plant community somewhat atypical of the region. Ten soil cores were collected from one site, and one core was intensively sampled for soil organic carbon content, pollen analysis, and {sup 14}C dating. The lowest level of the organic sediments represents the earliest phase of plant growth and dates to ca. 9000 cal BP. Palynological evidence indicates the presence of mesic shrub tundra (including sedge, birch, willow, and heath vegetation); and microfossil indicators point to wetter eutrophic conditions during this period. Carbon accumulation was rapid due to high net primary productivity in a relatively nutrient-rich environment. These results are interpreted as the local response to ameliorating climate during the early Holocene. The middle Holocene portion of the record contains an unconformity, indicating that between 8200 and 4200 cal BP sediments were eroded from the site, presumably in response to wind activity during a drier period centered around 4500 cal BP. The modern vegetation community of the erosional remnant was established after 4200 cal BP, and peat growth resumed. During the late Holocene, carbon accumulation rates were greatly reduced in response to the combined effects of declining productivity associated with climatic cooling, and increased nutrient stress as paludification and permafrost aggradation sequestered mineral nutrients.« less

Characterization of alkaline phosphatase activity in seminal plasma and in fresh and frozen-thawed stallion spermatozoa.

PubMed

Bucci, Diego; Giaretta, Elisa; Spinaci, Marcella; Rizzato, Giovanni; Isani, Gloria; Mislei, Beatrice; Mari, Gaetano; Tamanini, Carlo; Galeati, Giovanna

2016-01-15

Alkaline phosphatase (AP) has been studied in several situations to elucidate its role in reproductive biology of the male from different mammalian species; at present, its role in horse sperm physiology is not clear. The aim of the present work was to measure AP activity in seminal plasma and sperm extracts from freshly ejaculated as well as in frozen-thawed stallion spermatozoa and to verify whether relationship exists between AP activity and sperm quality parameters. Our data on 40 freshly ejaculated samples from 10 different stallions demonstrate that the main source of AP activity is seminal plasma, whereas sperm extracts contribution is very low. In addition, we found that AP activity at physiological pH (7.0) is significantly lower than that observed at pH 8.0, including the optimal AP pH (pH 10.0). Alkaline phosphatase did not exert any effect on sperm-oocyte interaction assessed by heterologous oocyte binding assay. Additionally, we observed a thermal stability of seminal plasma AP, concluding that it is similar to that of bone isoforms. Positive correlations were found between seminal plasma AP activity and sperm concentration, whereas a negative correlation was present between both spermatozoa extracts and seminal plasma AP activity and seminal plasma protein content. A significant decrease in sperm extract AP activity was found in frozen-thawed samples compared with freshly ejaculated ones (n = 21), concomitantly with the decrease in sperm quality parameters. The positive correlation between seminal plasma AP activity measured at pH 10 and viability of frozen-thawed spermatozoa suggests that seminal plasma AP activity could be used as an additional predictive parameter for stallion sperm freezability. In conclusion, we provide some insights into AP activity in both seminal plasma and sperm extracts and describe a decrease in AP after freezing and thawing. Copyright © 2016 Elsevier Inc. All rights reserved.

Actin Cytoskeletal Disruption following Cryopreservation Alters the Biodistribution of Human Mesenchymal Stromal Cells In Vivo

PubMed Central

Chinnadurai, Raghavan; Garcia, Marco A.; Sakurai, Yumiko; Lam, Wilbur A.; Kirk, Allan D.; Galipeau, Jacques; Copland, Ian B.

2014-01-01

Summary Mesenchymal stromal cells have shown clinical promise; however, variations in treatment responses are an ongoing concern. We previously demonstrated that MSCs are functionally stunned after thawing. Here, we investigated whether this cryopreservation/thawing defect also impacts the postinfusion biodistribution properties of MSCs. Under both static and physiologic flow, compared with live MSCs in active culture, MSCs thawed from cryopreservation bound poorly to fibronectin (40% reduction) and human endothelial cells (80% reduction), respectively. This reduction correlated with a reduced cytoskeletal F-actin content in post-thaw MSCs (60% reduction). In vivo, live human MSCs could be detected in murine lung tissues for up to 24 hr, whereas thawed MSCs were undetectable. Similarly, live MSCs whose actin cytoskeleton was chemically disrupted were undetectable at 24 hr postinfusion. Our data suggest that post-thaw cryopreserved MSCs are distinct from live MSCs. This distinction could significantly affect the utility of MSCs as a cellular therapeutic. PMID:25068122

Concentration and age of DOC transported from thawing permafrost soils into Arctic headwater streams

NASA Astrophysics Data System (ADS)

Romano, E. L.; Wickland, K.; Ebert, C.; Schuur, E.

2017-12-01

As Arctic permafrost stability decreases due to global climate change, hydrologic dynamics in catchments underlain by permafrost are expected to shift. The thickness of seasonally thawed surface soils is an important driver of the extent to which carbon (C) that was previously stored as frozen soil organic carbon (SOC) will be transported laterally as dissolved organic carbon (DOC). The concentration and radiocarbon (14C) age of newly thawed DOC that moves downslope through tundra soils and is delivered to headwater streams is an important indicator of changing C dynamics. Understanding the timing and quantity of C loss in this form is imperative for greenhouse gas emission and soil C stock estimates, as well as predicting the impact of permafrost thaw on aquatic ecosystems. In this study we examined the relationship between DOC concentrations, 14C-DOC, and active layer thickness (ALT) in thawing soils over time. Water samples were collected once in July 2016 and weekly in 2017 from late May to late August from wells within a long-term tundra soil warming experiment (n=36), located in a discontinuous permafrost zone in Interior Alaska. Preliminary data from 2016 shows average maximum ALT at wells within the warming treatment of 68.9 cm, while wells from control averaged 86.6 cm. 2016 water sample data from wells within the warming treatment showed higher mean DOC concentrations (103.1 ± 32.5 mg/L) and older 14C-DOC values (-28.7 ± 21.1 ‰) than samples from the control (44.5 ± 3.0 mg/L and 11.3 ± 8.6 ‰). To assess inter-annual changes in DOC delivery to local headwater streams, DOC concentration and 14C-DOC were also measured on water samples taken in late summer of 2007, 2008, and 2016 from streams within the watershed surrounding the experimental sites. Weekly sampling in 2017 allowed analysis of seasonal patterns of DOC concentration for that year. Values increased slightly over time at some stream sites (ranging from 4-33 mg/L in 2012 to 2-80 mg/L in 2016). Seasonal and inter-annual permafrost thaw appears to drive the release of previously stored old C in the form of DOC, which increases downslope mobility. In-situ terrestrial greenhouse gas emission estimates may therefore underestimate C losses, especially when precipitation is high or early in the season when spring snowmelt and shallow ALT promote lateral transport of DOC.

Balancing risk and benefit: maintenance of a thawed Group A plasma inventory for trauma patients requiring massive transfusion.

PubMed

Mehr, Chelsea R; Gupta, Rajan; von Recklinghausen, Friedrich M; Szczepiorkowski, Zbigniew M; Dunbar, Nancy M

2013-06-01

Transfusion of plasma and red blood cell (RBC) units in a balanced ratio approximating 1:1 has been shown in retrospective studies to be associated with improved outcomes for trauma patients. Our low-volume rural trauma center uses a trauma-activated transfusion algorithm. Plasma is thawed upon activation to avoid wastage. However, the time required for plasma thawing has made achievement of a 1:1 ratio early in resuscitation challenging. In this study, the time required for plasma thawing is characterized, and a potential solution is proposed. A retrospective chart study of 38 moderately and massively transfused (≥6 U in the first 24 hours) trauma patients admitted from January 2008 to March 2012 was performed. We evaluated the time required to dispense plasma and the number of RBCs dispensed before plasma in these patients. The average time between the dispense of RBCs and plasma was 26 minutes (median, 28; range, 0-48 minutes). The average number of RBCs dispensed before plasma was 8 U (median, 7 U; range, 0-24 U). Nearly one third of massively transfused patients had 10 RBCs or greater dispensed before plasma was available. There exists the potential for delayed plasma availability owing to time required for thawing, which may compromise the ability to provide balanced plasma to RBC transfusion to trauma patients. Maintenance of a thawed Group AB plasma inventory may not be operationally feasible for rural centers with low trauma volumes. Use of a thawed Group A plasma inventory is a potential alternative to ensure rapid plasma availability. Therapeutic study, level V.

The cryoprotective effect of trehalose supplementation on boar spermatozoa quality.

PubMed

Hu, J-H; Li, Q-W; Jiang, Z-L; Yang, H; Zhang, S-S; Zhao, H-W

2009-08-01

In order to improve boar sperm quality during frozen-thawed process, the influence of the presence of trehalose on success of cryopreservation of boar sperm were investigated. We evaluated freeze-thawing tolerance of boar spermatozoa in a base cooling extender with the addition of different trehalose concentrations (0, 25, 50, 100 and 200 mm), and try to determine the optimum concentration of trehalose. We chose sperm motility, mitochondrial activity, acrosome integrity and membrane integrity as parameters to evaluate cryopreservation capacity of boar spermatozoa. We obtained the best results for 100 mm trehalose-supplemented extenders, with values of 49.89% for motility, 44.69% for mitochondrial activity, 66.52% for acrosome integrity and 44.61% for membrane integrity, while freeze-thawing tolerance diminished significantly for 200 . The synergic effect of trehalose and glycerol resulted in better cryosurvival of boar spermatozoa than that of a single cryoprotectant. In conclusion, when trehalose-supplementation was added up to 100 mm, trehalose confers a greater cryoprotective capacity to the extender, and the sperm motility, mitochondrial activity, membrane integrity and acrosome integrity parameters were significantly improved during frozen-thawed process.

Seasonal frost conditions in different periglacial landforms in the Eastern Pyrenees from 2003 to 2015

NASA Astrophysics Data System (ADS)

Salvador-Franch, Ferran; Salvà-Catarineu, Montserrat; Oliva, Marc; Gómez-Ortiz, Antonio

2016-04-01

Glaciers shaped the headwaters and valley floors in the Eastern Pyrenees during the Last Glaciation at elevations above 2100-2200 m. Since the deglaciation of these areas, periglacial processes have generated a wide range of periglacial landforms, such as rock glaciers, patterned ground and debris slopes. The role of soil temperatures is decisive for the degree of activity of periglacial processes: cryoturbation, solifluction, frost weathering, etc. Nowadays, periglacial processes in the Eastern Pyrenees are driven by a seasonal frozen layer extending 5-7 months. In general, at 2100 m the seasonal frost reaches 20 cm depth, while at 2700 m reaches 50 cm depth. However, soil temperatures, and thus, periglacial processes are strongly controlled by the large interannual variability of the snow cover. With the purpose of understanding the rhythm and intensity of soil freezing/thawing in 2003 we set up several monitoring sites along a vertical transect from the valley floors (1100 m) to the high plateaus (2700 m) across the southern slope of the Puigpedrós massif (2914 m), in the Eastern Pyrenees. The monitoring of soil temperatures has been conducted from 2003 to 2015 in different periglacial landforms using UTL and Hobo loggers. These loggers were installed at depths of 5, 20 and 50 cm at five sites: Calmquerdós (2730 m), Malniu (2230 m), La Feixa (2150 m), Meranges (1600 m) and Das (1097 m). Air temperatures used as reference come from two automatic stations of the Catalan Meteorological Survey in Malniu and Das, and with two loggers installed in La Feixa and Meranges. No permafrost regime was detected in none of the sites. Data shows evidence of the control of snow cover on the depth of the frozen layer and on the number of freeze-thaw cycles. Air temperatures at 2000-2200 m show a mean of 150 freeze-thaw cycles per year. In La Feixa, with very thin snow cover, only 67 cycles are recorded at 5 cm depth and 5 cycles at 50 cm depth. In Malniu, located at a higher elevation showing a thicker and longer snow cover, only 17 freeze-thaw cycles per year are recorded at 5 cm depth, with no cycles recorded at 50 cm depth. Soils remain unfrozen during years with a very thick snow cover. The snow cover is also largely conditioned by the microtopography and exposure to the dominant winds. These factors condition the distribution, duration and intensity of the frozen ground and, thus, determine the intensity of periglacial processes in these areas.

Ground thermal conditions along a vertical transect with contrasted topography in a high mountain Mediterranean environment (Puigpedrós massif, eastern Pyrenees), from 2003 to 2014

NASA Astrophysics Data System (ADS)

Salvador-Franch, Ferran; Salvà-Catarineu, Montserrat; Oliva, Marc; Gómez-Ortiz, Antonio

2015-04-01

During the Last Glaciation glaciers shaped the headwaters and valley floors in the Eastern Pyrenees above 2100-2200 m. Since the deglaciation of these high mountain environments, periglacial processes have generated rock glaciers, patterned ground and debris slopes. The role of soil temperatures is decisive regarding the contemporary activity of several processes: cryoturbation, solifluction, frost weathering, etc. Nowadays, periglacial processes are driven by a seasonal frozen layer extending 4-5 months. At 2100 m the seasonal frost reaches 20 cm depth, while at 2700 m reaches 50 cm depth. However, soil temperatures, and thus, periglacial processes are strongly controlled by the large interannual variability of the snow cover. With the purpose of understanding the rhythm and intensity of soil freezing/thawing we have set up several monitoring sites along a vertical transect from the high plateaus (2700 m) to the valley floors (1100 m) across the southern slope of the Puigpedrós massif (2914 m), in the Eastern Pyrenees. The monitoring of soil temperatures extends from 2003 to 2014. TinyTalk, UTL and Hobo loggers have been used in this study. These loggers were installed at depths of -5, -20 and -50 cm at five sites: Calmquerdós (2730 m), Malniu (2230 m), La Feixa (2150 m), Meranges (1600 m) and Das (1097 m). Air temperatures used as reference come from two automatic stations of the Catalan Meteorological Survey (Malniu, Das) as well as from two loggers installed in La Feixa and Meranges. Data shows the control of snow cover on the depth of the frozen layer and on the number of freeze-thaw cycles. Air temperatures at 2000-2200 m show a mean of 150 freeze-thaw cycles per year. In La Feixa, with very thin snow cover, only 67 cycles are recorded at 5 cm depth and 5 cycles at 50 cm depth. In Malniu, located at a higher elevation showing a thicker and longer snow cover, only 17 freeze-thaw cycles per year are recorded at 5 cm depth, with no cycles recorded at 50 cm depth. Soils remain unfrozen during years with a very thick snow cover. The snow cover is also largely conditioned by the microtopography and exposure to the dominant winds. These factors condition the distribution, duration and intensity of the frozen ground and, thus, determine the intensity of periglacial processes in these areas.

Hydrologic controls on the transport and cycling of carbon and nitrogen in a boreal catchment underlain by continuous permafrost

NASA Astrophysics Data System (ADS)

Koch, J. C.; Runkel, R. L.; Striegl, R.; McKnight, D. M.

2013-06-01

ecosystems represent a large carbon (C) reservoir and a substantial source of greenhouse gases. Hydrologic conditions dictate whether C leached from boreal soils is processed in catchments or flushed to less productive environments via the stream. This study quantified hydrologic and biogeochemical C loss from a boreal catchment underlain by frozen silt, where flowpaths may deepen as the active layer thaws over the summer. We hypothesized a decrease in the magnitude of C mineralization over the summer associated with changing flowpaths and decreasing hydrologic connectivity, organic matter lability, and nitrogen (N) availability. Conservative tracers were used to partition C and N loss between catchment export and biogeochemical processing. Coupling tracers with tributary and porewater chemistry indicated C and N cycling in soil flowpaths, with an exponential decrease over the summer. Nitrate was primarily reduced in hillslope flowpaths and the lack of N reaching the stream appeared to limit C mineralization. Stream export accounted for the greatest loss of C, removing 247 and 113 mol hr-1 in the early and late summer, respectively. Reactivity was related to hydrologic connectivity between the soils and stream, which was greatest early in the summer and following a large flood. While a warming climate may increase storage potential in thawed soils, the early-season flush of labile material and late-season runoff through mineral flowpaths may maintain high C export rates. Therefore, we highlight physical export as a dominant cause of aqueous C loss from silty catchments as the Arctic continues to thaw.

Lipid class and fatty acid composition of a little-known and rarely collected alga Exophyllum wentii Weber-van Bosse from Bali Island, Indonesia.

PubMed

Illijas, Muhammad I; Indy, Jeane R; Yasui, Hajime; Itabashi, Yutaka

2009-01-01

The lipid class and fatty acid composition of a little-known and rarely collected alga Exophyllum wentii from Bali Island, Indonesia were determined for fresh and frozen-thawed samples using thin-layer chromatography, gas-liquid chromatography, and high-performance liquid chromatography. Glycoglycerolipids, which mainly consisted of mongalactosyldiacylglycerols (MGDG) and digalactosyldiacylglycerols (DGDG), were the predominant lipid components, accounting for 67% and 56% of the total polar lipid content in the fresh and frozen-thawed samples, respectively. Phospholipids, including phosphatidylcholines (PC) and phosphatidylglycerols (PG), were detected with lesser amounts in both samples (16-17% of the total polar lipid content). Free fatty acids (FFA), sterols and triacylglycerols (TAG) were also detected in minor quantities; however, the FFA content in the frozen-thawed sample increased to up to 20% of the total lipid content, suggesting that hydrolysis of the membrane lipids had occurred. A crude enzyme preparation from the alga showed activities for hydrolyzing the acyl groups of the phospholipids and glycoglycerolipids. Palmitic acid (16:0) and arachidonic acid (20:4n-6) were the major fatty acids in both the total lipid and in individual polar lipid classes as well as the dominant fatty acids released from the membrane lipids by enzymatic hydrolysis. The high level of 20:4n-6 (29%) in the total lipid and the presence of considerable amounts of PC (11% of the total polar lipid) and PG (6.2%) support classification of E. wentii into the Division Rhodophyta.

Dynamics of water mass in the Central Siberia permafrost zone based on gravity survey from the grace satellites

NASA Astrophysics Data System (ADS)

Im, S. T.; Kharuk, V. I.

2015-12-01

The GRACE gravimetric survey is applied to analyze the equivalent water mass anomalies (EWMAs) in the permafrost zone of Central Siberia. Variations in EWMAs are related to precipitation, air temperature, potential evapotranspiration, and soil composition (drainage conditions). The EWMA dynamics demonstrates two periods. The period of 2003-2008 is characterized by a positive trend. The one of 2008-2012 shows a decrease in the trend with a simultaneous increase by 30-70% of EWMA dispersion in the background of growth (up to 40%) of precipitation variability. The rate of water mass increment demonstrates a positive correlation with the sand and gravel contents in soil ( r = 0.72) and a negative one with clay content ( r =-0.69 to-0.77). For Taimyr Peninsula, there is a deficit of residual water mass (~250 mm for the period of 2012-2013) indicating the deeper thawing of permafrost soils. In the Central Siberian Plateau, the indicator of more intensive permafrost thawing (and that of an increase in active layer thickness) is a considerable trend of water mass increase (2003-2008). The increasing trend of the largest Siberian rivers (Yenisei and Lena) is revealed in the period of 2003-2012.

Effect of alpha-lipoic acid on boar spermatozoa quality during freezing-thawing.

PubMed

Shen, Tao; Jiang, Zhong-Liang; Li, Cong-Jun; Hu, Xiao-Chen; Li, Qing-Wang

2016-04-01

Alpha-lipoic acid (ALA) is known to be a natural antioxidant. The aim of the present study was to evaluate the cryoprotective effect of ALA on the motility of boar spermatozoa and its antioxidant effect on boar spermatozoa during freezing-thawing. Different concentrations (2.0, 4.0, 6.0, 8.0 or 10.0 mg/ml) of ALA were added to the extender used to freeze boar semen, and the effects on the quality and endogenous antioxidant enzyme activities of frozen-thawed spermatozoa were assessed. The results indicated that the addition of ALA to the extender resulted in a higher percentage of motile spermatozoa post-thaw (P < 0.05). The activities of superoxide dismutase, lactate dehydrogenase, glutamic-oxaloacetic transaminase and catalase improved after adding ALA to the extender (P < 0.05). Artificial insemination results showed that pregnancy rate and litter size were significantly higher at 6.0 mg/ml in the ALA group than in the control group (P < 0.05). In conclusion, ALA conferred a cryoprotective capacity to the extender used for boar semen during the process of freezing-thawing, and the optimal concentration of ALA for the frozen extender was 6.0 mg/ml.

Influence of freeze-thawing on hyaluronic acid binding of human spermatozoa.

PubMed

Nijs, Martine; Creemers, Eva; Cox, Annemie; Janssen, Mia; Vanheusden, Elke; Castro-Sanchez, Yovanna; Thijs, Herbert; Ombelet, Willem

2009-08-01

Mature human spermatozoa have at least three specific hyaluronic acid (HA) binding proteins present on their sperm membrane. These receptors play a role in the acrosome reaction, hyaluronidase activity, hyaluronan-mediated motility and sperm-zona and sperm-oolemmal binding. Cryopreservation of spermatozoa can cause ultrastructural and even molecular damage. The aim of this study was to investigate if HA binding receptors of human spermatozoa remain functional after freeze-thawing. Forty patients were enrolled in the study. Semen samples were analysed before and after cryopreservation. Parameters analysed included concentration, motility, morphology and hyaluronan binding. Samples were frozen in CBS straws using a glycerol-glucose-based cryoprotectant. HA binding was studied using the sperm-hyaluronan binding assay. Freeze-thawing resulted in a significant decline in motility: the percentage of motile spermatozoa reduced from 50.6 to 30.3% (P < 0.001). HA binding properties of frozen-thawed spermatozoa remained unchanged after the freeze-thawing process: 68.5 +/- 17.1% spermatozoa of the neat sample were bound to HA, as were 71.3 +/- 20.4 of the frozen-thawed sample. This study indicates that freeze-thawing did not alter the functional hyaluronan binding sites of mature motile spermatozoa, and therefore will not alter their fertilizing potential.

Seasonality of primary and secondary production in an Arctic river

NASA Astrophysics Data System (ADS)

Kendrick, M.; Huryn, A.; Deegan, L.

2011-12-01

Rivers and streams that freeze solid for 8-9 months each year provide excellent examples of the extreme seasonality of arctic habitats. The communities of organisms inhabiting these rivers must complete growth and development during summer, resulting in a rapid ramp-up and down of production over the short ice-free period. The effects of recent shifts in the timing of the spring thaw and autumn freeze-up on the duration and pattern of the period of active production are poorly understood. We are currently investigating: 1) the response of the biotic community of the Kuparuk River (Arctic Alaska) to shifts in the seasonality of the ice-free period, and 2) the community response to increases in phosphorous (P) supply anticipated as the volume of the permafrost active-layer increases in response to climate warming. Here algal production supports a 2-tier web of consumers. We tracked primary and secondary production from the spring thaw through mid-August in a reference reach and one receiving low-level P fertilization. Gross primary production/community respiration (GPP/R) ratios for both reaches were increasing through mid-July, with higher GPP/R in response to the P addition. Understanding the degree of synchrony between primary and secondary production in this Arctic river system will enhance further understanding of how shifts in seasonality affect trophic dynamics.

Interactive effects of wildfire and permafrost thaw on peatland carbon cycling

NASA Astrophysics Data System (ADS)

Olefeldt, David; Heffernan, William; Gibson, Carolyn; Burd, Katheryn; Estop-Aragones, Cristian

2017-04-01

Boreal peatland complexes in western Canada are fine-scale mosaics of permafrost affected peat plateaus interspersed with Sphagnum dominated thermokarst bogs where permafrost is absent. Wildfire further affects landscape patterning of peatland complexes, where virtually all peat plateaus are in a stage of secondary succession following wildfire. With climate change we expect both permafrost thaw and wildfire activity to increase in these landscapes, and to have important impacts on carbon cycling. In a number of studies, we have used soil chamber techniques to assess the influence of both permafrost thaw and wildfire on soil respiration, net ecosystem exchange and methane emissions. We used chronosequences to assess the influence of time since both permafrost thaw (3 - 15 years) and wildfire (20 - 150 years). Radiocarbon signatures of soil respiration in both burned and thawed locations was used to determine the contribution of aged soil carbon to soil respiration. We furthermore characterized individual and interactive effects of fire and thaw on microbial and photochemical lability of dissolved organic matter. At many field sites it was clear that recent wildfire had accelerated permafrost thaw, and we combined field observations of soil thermal regimes with remote sensing approaches to assess the role of wildfire for accelerating permafrost thaw over the last 50 years at a regional scale. Overall, our results highlight the need to consider both individual and interacting effects of thaw and fire for projections of the future carbon cycling at the regional level.

Active layer and permafrost thermal regime in a patterned ground soil in Maritime Antarctica, and relationship with climate variability models.

PubMed

Chaves, D A; Lyra, G B; Francelino, M R; Silva, Ldb; Thomazini, A; Schaefer, Cegr

2017-04-15

Permafrost and active layer studies are important to understand and predict regional climate changes. The objectives of this work were: i) to characterize the soil thermal regime (active layer thickness and permafrost formation) and its interannual variability and ii) to evaluate the influence of different climate variability modes to the observed soil thermal regime in a patterned ground soil in Maritime Antarctica. The study was carried out at Keller Peninsula, King George Island, Maritime Antarctica. Six soil temperatures probes were installed at different depths (10, 30 and 80cm) in the polygon center (Tc) and border (Tb) of a patterned ground soil. We applied cross-correlation analysis and standardized series were related to the Antarctic Oscillation Index (AAO). The estimated active layer thickness was approximately 0.75cm in the polygon border and 0.64cm in the center, indicating the presence of permafrost (within 80cm). Results indicate that summer and winter temperatures are becoming colder and warmer, respectively. Considering similar active layer thickness, the polygon border presented greater thawing days, resulting in greater vulnerability to warming, cooling faster than the center, due to its lower volumetric heat capacity (Cs). Cross-correlation analysis indicated statistically significant delay of 1day (at 10cm depth) in the polygon center, and 5days (at 80cm depth) for the thermal response between atmosphere and soil. Air temperature showed a delay of 5months with the climate variability models. The influence of southern winds from high latitudes, in the south facing slopes, favored freeze in the upper soil layers, and also contributed to keep permafrost closer to the surface. The observed cooling trend is linked to the regional climate variability modes influenced by atmospheric circulation, although longer monitoring period is required to reach a more precise scenario. Copyright © 2017 Elsevier B.V. All rights reserved.

Assessment of Climate Driven Dynamics of Active Layer, Hydrological and Vegetation Status at the Qinghai-Tibet Plateau Using Dynamic Global Vegetation Model

NASA Astrophysics Data System (ADS)

Yang, Y.

2014-12-01

Extensive permafrost degradation starting from 1970s is observed at the Qinghai-Tibet Plateau , China. Degradation is attributed to an increase in mean annual ground temperature 0.1◦-0.5◦ C with mainly winter warming. The construction of Qinghai-Tibet Railway also influenced a state of permafrost in the area Permafrost degradation caused negative environmental consequences in the area. The areas covered by sand are expanding steadily making large concern of accelerating desertification. The general pathway of future joint dynamics of permafrost, vegetation and hydrological status at the Qinghai-Tibet Plateau is still poorly understood and foreseeable. Hydrology in the area is determined by heat-moisture dynamics of active layer. This dynamics is highly non-linear and depends as on external climatic variables temperature and precipitation, so on soil and rock properties (amount of sand against aeolian deposits in the Plateau) as well as vegetation cover, which determine thaw and freeze processes in the active layer and evaporation and run-off. SEVER DGVM was modified to include heat-moisture dynamics of active layer in the Qinghai-Tibet Plateau. SEVER DGVM imitates processes in 10 plant functional types at coarse resolution of 0.5 degrees. This model imitates behavior of average individual of each plant type in each grid cell through simulation years. Each of those grid cells processed independently. First, this model starts from "bare soil", placing a bit of each plant type and giving them some time to grow and achieve equilibrium. Then, including active layer thickness and soil moisture dynamics into this layer, it allows assessment of potential environmental dynamics in this area. Simulations demonstrate further degradation of pastureland and accelerating desertification processes in this vitally important water feed area for many Asian rivers. Negative environmental problems related to operation of Qinghai-Tibet are also assessed.

The Soil Moisture Active Passive (SMAP) Radar: Measurements at High Latitudes and of Surface Freeze/Thaw State

NASA Technical Reports Server (NTRS)

Spencer, Michael; Dunbar, Scott; Chen, Curtis

2013-01-01

The Soil Moisture Active/Passive (SMAP) mission is scheduled for a late 2014 launch date. The mission will use both active radar and passive radiometer instruments at L-Band in order to achieve the science objectives of measuring soil moisture and land surface freeze-thaw state. To achieve requirements for a wide swath at sufficiently high resolution for both active and passive channels, an instrument architecture that uses a large rotating reflector is employed. In this paper, focus will be placed on the radar design. The radar will employ synthetic-aperture processing to achieve a "moderate" resolution dual-pol product over a 1000 km swath. Because the radar is operating continuously, very frequent temporal coverage will be achieved at high latitudes. This data will be used to produce a surface freeze/thaw state data product.

Uncertainty in Arctic hydrology projections and the permafrost-carbon feedback

NASA Astrophysics Data System (ADS)

Andresen, C. G.; Lawrence, D. M.; Wilson, C. J.; McGuire, D.

2017-12-01

Projected warming is expected to thaw permafrost soils and deepen the permafrost active layer. These changes will affect surface hydrological conditions. Since the soil hydrologic state exerts a strong influence on the rate and pathway of soil organic matter decomposition into CO2 or CH4, there is a strong need to examine and better understand model projections of hydrologic change and how differences in process representation affect projections of wetting and/or drying of changing permafrost landscapes. This study aims to advance understanding of where, when and why arctic will become wetter or drier. We assessed simulations from 8 "permafrost enabled" land models that were run in offline mode from 1960 to 2299 forced with the same projected climate for a high-emissions scenario. Climate models project increased precipitation (P) across most of the Arctic domain and the land models indicate that runoff and evapotranspiration (ET) will also both increase. In general, the water input to the soil (P-ET) also increases, but the models project a contradicting long-term drying of the surface soil. The surface drying in the models can generally be explained by filtration of moisture to deeper soil layers as the active layer deepens or by increased sub-surface drainage where permafrost in a grid cell thaws completely. Though, there is a qualitative agreement in this type of response across the models, the projections vary dramatically in magnitude. Variability among simulations is largely attributed to parameterization and structural differences across the participating models, particularly the diverse representations of evapotranspiration, water table and soil water storage and transmission. A limited set of results from single forcing experiments suggests that the warming effect in the sensitivity analysis was the principal driver of soil drying while CO2 and precipitation effects had a small wetting influence. When compared to observational data, simulations tend to underestimate discharge by a factor of 2 for the major arctic river basins. This analysis serves as a baseline to identify key process representation gaps and opportunities to improve representation of permafrost hydrology and associated projections of carbon and energy feedbacks in land models.

CO2 emissions from permafrost regions in Alaska during the nongrowing seasons

NASA Astrophysics Data System (ADS)

Natali, S.; Risk, D. A.; Minions, C.; Ludwig, S.; Watts, J. D.; Rogers, B. M.; Goetz, S. J.; Jastrow, J. D.; Jorgenson, T.; Schade, J. D.

2017-12-01

Surface air temperatures in the Arctic have been increasing twice as fast as the global average, and climate models project that this rate of warming will continue through the century, with the greatest warming occurring during the winter months. An increase in wintertime temperature may reduce belowground carbon storage due to enhanced microbial respiration during the snow-covered period when plant carbon uptake has predominantly ceased. Carbon emissions during the nongrowing season (NGS: i.e., autumn, winter and spring) are an important component of annual respiratory loss, yet there are large uncertainties in local and regional estimates of NGS CO2 fluxes. To address these uncertainties, we established a network of automated soil respiration sensors that run throughout the year at 10 locations across AK, including several paired burned and unburned sites in tundra and boreal regions. We measured soil CO2 flux, soil temperature (15, 50, 100 cm), soil moisture, and snow depth throughout the NGS, and plant cover, stand density, organic layer depth and thaw depth, and we analyzed active layer soils for total C and N, and organic matter composition. During spring thaw, all sites exhibited a strong pulse of CO2, a result of physical release of CO2 produced during the NGS. CO2 flux rates during the spring thaw were 1-2 orders of magnitude higher than winter CO2 fluxes and twice as high as fluxes during the early growing season. While temperature was a key driver of NGS fluxes across sites, our results suggest that soil organic matter content and composition were also important for NGS CO2 production. Despite warmer soils in burned spruce forests (Nome Creek, 2004 burn and Hess Creek, 2003 burn; 1-2 C warmer at 50-100 cm) compared to mature forests, NGS fluxes were either not significantly different or were higher in the mature stands than in burned stands, which may be a result of substrate limitation to NGS fluxes following fire. Quantifying the magnitude and drivers of NGS CO2 flux is critical for determining whether the Arctic is currently a source or sink for carbon and how this is likely to change as warming continues.

Thermokarst lake dynamics and its influence on biogeochemical sediment characteristics: A case study from the discontinuous permafrost zone in Interior Alaska

NASA Astrophysics Data System (ADS)

Lenz, J.; Walter Anthony, K. M.; Maio, C. V.; Matuszewski, F.; Grosse, G.

2017-12-01

Under currently projected scenarios of climate warming, discontinuous warm permafrost in Interior Alaska is expected to experience widespread disappearance. Thermokarst ponds and lakes are evidence for rapid permafrost thaw and amplify deep thaw by talik development. During the thawing process, previously preserved organic matter is made available for decomposition and former permafrost carbon is potentially released as greenhouse gases carbon dioxide and methane. In the course of lake development and shoreline expansion, both, younger near-surface and older organic matter from slumping shores are potentially deposited in the lake basin. Lake internal bioproductivity is complementing carbon accumulation in lacustrine deposits and provides an additional source of young carbon. This study presents results of two intersecting, limnolithological transects of 5 sediment cores from Goldstream Lake, a typical small, boreal thermokarst lake in Interior Alaska. We here distinguish external terrestrial and internal aquatic carbon contributions to sediments based on sediment samples that were analyzed for the total organic carbon/total nitrogen ratio (C/N) as well as stable carbon isotopes. The littoral zone with actively eroding shorelines is characterized by methane seeps produced from anaerobic microbial decomposition; however, near-shore sediments have surprisingly low total organic carbon contents with a mean of 1.5 wt%; the low C/N ratio of 8.7 indicate a dominance of lacustrine plant material. Very similar results were found for sediments in the central basin, but here a clear shift to a terrestrial carbon signal (C/N of 22) with total organic carbon content of almost 30 wt% is presumably indicating the presence of a trash layer featuring largely terrestrial plants submerged during the initial lake phase. The talik sediments have carbon storage similar to the lake sediments but in contrast are not layered. Subarctic aquatic environments such as Goldstream Lake demonstrate a high aquatic productivity as well as a high biogeochemical turn-over over short periods of time. In addition, the ongoing decomposition of organic matter in talik sediments proves to be crucial to assess the contribution of thermokarst lakes to future climate change by mobilizing soil carbon previously frozen in permafrost.

Application of Spaceborne Scatterometer for Mapping Freeze-Thaw State in Northern Landscapes as a Measure of Ecological and Hydrological Processes

NASA Technical Reports Server (NTRS)

McDonald, Kyle; Kimball, John; Zimmermann, Reiner; Way, JoBea; Frolking, Steve; Running, Steve

1994-01-01

Landscape freeze/thaw transitions coincide with marked shifts in albedo, surface energy and mass exchange, and associated snow dynamics. monitoring landscape freeze/thaw dynamics would improve our ability to quantify the interannual variability of boreal hydrology and river runoff/flood dynamics, The annual duration of frost-free period also bounds the period of photosynthetic activity in borel and arctic regions thus affecting the carbon budget and the interannual variability fo regional carbon fluxes.

Life in Ice: Microbial Growth Dynamics and Greenhouse Gas Production During Winter in a Thermokarst Bog Revealed by Stable Isotope Probing Targeted Metagenomics

NASA Astrophysics Data System (ADS)

Blazewicz, S.; White, R. A., III; Tas, N.; Euskirchen, E. S.; Mcfarland, J. W.; Jansson, J.; Waldrop, M. P.

2016-12-01

Permafrost contains a reservoir of frozen C estimated to be twice the size of the current atmospheric C pool. In response to changing climate, permafrost is rapidly warming which could result in widespread seasonal thawing. When permafrost thaws, soils that are rich in ice and C often transform into thermokarst wetlands with anaerobic conditions and significant production of atmospheric CH4. While most C flux research in recently thawed permafrost concentrates on the few summer months when seasonal thaw has occurred, there is mounting evidence that sizeable portions of annual CO2 and CH4 efflux occurs over winter or during a rapid burst of emissions associated with seasonal thaw. A potential mechanism for such efflux patterns is microbial activity in frozen soils over winter where gasses produced are partially trapped within ice until spring thaw. In order to better understand microbial transformation of soil C to greenhouse gas over winter, we applied stable isotope probing (SIP) targeted metagenomics combined with process measurements and field flux data to reveal activities of microbial communities in `frozen' soil from an Alaskan thermokarst bog. Field studies revealed build-up of CO2 and CH4 in frozen soils suggesting that microbial activity persisted throughout the winter in soils poised just below the freezing point. Laboratory incubations designed to simulate in-situ winter conditions (-1.5 °C and anaerobic) revealed continuous CH4 and CO2 production. Strikingly, the quantity of CH4 produced in 6 months in frozen soil was equivalent to approximately 80% of CH4 emitted during the 3 month summer `active' season. Heavy water SIP targeted iTag sequencing revealed growing bacteria and archaea in the frozen anaerobic soil. Growth was primarily observed in two bacterial phyla, Firmicutes and Bacteroidetes, suggesting that fermentation was likely the major C mineralization pathway. SIP targeted metagenomics facilitated characterization of the primary metabolic pathways in growing organisms that likely drove C mineralization. Results indicate that winter microbial activities can play an important role in controlling seasonal C flux in recent thawed permafrost and characterization of growing organisms leads to stronger mechanistic linkages between the soil microbial community and ecosystem processes.

Thrombin generation, ProC(®)Global, prothrombin time and activated partial thromboplastin time in thawed plasma stored for seven days and after methylene blue/light pathogen inactivation.

PubMed

Thiele, Thomas; Hron, Gregor; Kellner, Sarah; Wasner, Christina; Westphal, Antje; Warkentin, Theodore E; Greinacher, Andreas; Selleng, Kathleen

2016-01-01

Methylene blue pathogen inactivation and storage of thawed plasma both lead to changes in the activity of several clotting factors. We investigated how this translates into a global loss of thrombin generation potential and alterations in the protein C pathway. Fifty apheresis plasma samples were thawed and each divided into three subunits. One subunit was stored for 7 days at 4 °C, one was stored for 7 days at 22 °C and one was stored at 4 °C after methylene blue/light treatment. Thrombin generation parameters, ProC(®)Global-NR, prothrombin time and activated partial thromboplastin time were assessed on days 0 and 7. The velocity of thrombin generation increased significantly after methylene blue treatment (increased thrombin generation rate; time to peak decreased) and decreased after storage (decreased thrombin generation rate and peak thrombin; increased lag time and time to peak). The endogenous thrombin generation potential remained stable after methylene blue treatment and storage at 4 °C. Methylene blue treatment and 7 days of storage at 4 °C activated the protein C pathway, whereas storage at room temperature and storage after methylene blue treatment decreased the functional capacity of the protein C pathway. Prothrombin time and activated partial thromboplastin time showed only modest alterations. The global clotting capacity of thawed plasma is maintained at 4 °C for 7 days and directly after methylene blue treatment of thawed plasma. Thrombin generation and ProC(®)Global are useful tools for investigating the impact of pathogen inactivation and storage on the clotting capacity of therapeutic plasma preparations.

Regional atmospheric cooling and wetting effect of permafrost thaw-induced boreal forest loss.

PubMed

Helbig, Manuel; Wischnewski, Karoline; Kljun, Natascha; Chasmer, Laura E; Quinton, William L; Detto, Matteo; Sonnentag, Oliver

2016-12-01

In the sporadic permafrost zone of North America, thaw-induced boreal forest loss is leading to permafrost-free wetland expansion. These land cover changes alter landscape-scale surface properties with potentially large, however, still unknown impacts on regional climates. In this study, we combine nested eddy covariance flux tower measurements with satellite remote sensing to characterize the impacts of boreal forest loss on albedo, eco-physiological and aerodynamic surface properties, and turbulent energy fluxes of a lowland boreal forest region in the Northwest Territories, Canada. Planetary boundary layer modelling is used to estimate the potential forest loss impact on regional air temperature and atmospheric moisture. We show that thaw-induced conversion of forests to wetlands increases albedo: and bulk surface conductance for water vapour and decreases aerodynamic surface temperature. At the same time, heat transfer efficiency is reduced. These shifts in land surface properties increase latent at the expense of sensible heat fluxes, thus, drastically reducing Bowen ratios. Due to the lower albedo of forests and their masking effect of highly reflective snow, available energy is lower in wetlands, especially in late winter. Modelling results demonstrate that a conversion of a present-day boreal forest-wetland to a hypothetical homogeneous wetland landscape could induce a near-surface cooling effect on regional air temperatures of up to 3-4 °C in late winter and 1-2 °C in summer. An atmospheric wetting effect in summer is indicated by a maximum increase in water vapour mixing ratios of 2 mmol mol -1 . At the same time, maximum boundary layer heights are reduced by about a third of the original height. In fall, simulated air temperature and atmospheric moisture between the two scenarios do not differ. Therefore, permafrost thaw-induced boreal forest loss may modify regional precipitation patterns and slow down regional warming trends. © 2016 John Wiley & Sons Ltd.

Estimating Rates of Permafrost Degradation and their Impact on Ecosystems across Alaska and Northwest Canada using the Process-based Permafrost Dynamics Model GIPL as a Component of the Integrated Ecosystem Model (IEM)

NASA Astrophysics Data System (ADS)

Marchenko, S. S.; Genet, H.; Euskirchen, E. S.; Breen, A. L.; McGuire, A. D.; Rupp, S. T.; Romanovsky, V. E.; Bolton, W. R.; Walsh, J. E.

2016-12-01

The impact of climate warming on permafrost and the potential of climate feedbacks resulting from permafrost thawing have recently received a great deal of attention. Permafrost temperature has increased in most locations in the Arctic and Sub-Arctic during the past 30-40 years. The typical increase in permafrost temperature is 1-3°C. The process-based permafrost dynamics model GIPL developed in the Geophysical Institute Permafrost Lab, and which is the permafrost module of the Integrated Ecosystem Model (IEM) has been using to quantify the nature and rate of permafrost degradation and its impact on ecosystems, infrastructure, CO2 and CH4fluxes and net C storage following permafrost thaw across Alaska and Northwest Canada. The IEM project is a multi-institutional and multi-disciplinary effort aimed at understanding potential landscape, habitat and ecosystem change across the IEM domain. The IEM project also aims to tie three scientific models together Terrestrial Ecosystem Model (TEM), the ALFRESCO (ALaska FRame-based EcoSystem Code) and GIPL so that they exchange data at run-time. The models produce forecasts of future fire, vegetation, organic matter, permafrost and hydrology regimes. The climate forcing data are based on the historical CRU3.1 data set for the retrospective analysis period (1901-2009) and the CMIP3 CCCMA-CGCM3.1 and MPI-ECHAM5/MPI-OM climate models for the future period (2009-2100). All data sets were downscaled to a 1 km resolution, using a differencing methodology (i.e., a delta method) and the Parameter-elevation Regressions on Independent Slopes Model (PRISM) climatology. We estimated the dynamics of permafrost temperature, active layer thickness, area occupied by permafrost, and volume of thawed soils across the IEM domain. The modeling results indicate how different types of ecosystems affect the thermal state of permafrost and its stability. Although the rate of soil warming and permafrost degradation in peatland areas are slower than other areas, a considerable volume of peat will be thawed by the end of the current century. The release of carbon and the net effect of this thawing depends on the balance between increased productivity and respiration, which depend, in part, on soil moisture dynamics.

Canonical correlation analysis to identify the semen characteristics used to forecast the freeze survival of Curimba (Prochilodus lineatus) spermatozoa.

PubMed

Carvalho, A F S; Murgas, L D S; Ferreira-Machad, M R; Andrade, E S; Felizardo, V O; Allaman, I B; de Paula, F G

　　OBJECTIVE: To identify which sperm characteristics were able to predict more accurately the quality of curimba (Prochilodus lineatus) semen upon freezing using canonical correlation analysis. Eleven fish breeders with initial mean weight of 705.21 ± 111 g were used. For cryopreservation, 200 µL of semen were taken from each animal and diluted in the cryoprotectant solution (10% dimethyl sulfoxide and 5% Beltsville Thawing Solution Minitub) in a 1:4 ratio and placed into 0.5-mL straws. Sperm characteristics (motility, sperm abnormalities, total antioxidant activity and lipid peroxidation) were evaluated. A randomized block design with duplicate samples per treatment (fresh and frozen semen) was used. The block factor was the animals, and the experimental unit the ejaculates. Canonical correlation was used to evaluate the association between sperm characteristics of fresh semen and thawed semen. There was a significant association (P = 0.10) among the variables measured in fresh semen with the variables measured in thawed semen, and 78.6% of the difference observed in the thawed semen can be attributed to variation of variables measured in fresh semen. Sperm motility, motility duration and antioxidant activity of the thawed semen showed an inverse relationship with those of the fresh semen; whereas the minor sperm abnormalities, major sperm abnormalities and lipid peroxidation showed a direct relationship with those of the fresh semen. Only the rate and motility duration of the thawed semen presented high correlation (-0.63 and -0.73, respectively) with the canonical variable represented by the sperm characteristics of fresh semen. The rate and motility duration of fresh semen may be used to predict the quality of the thawed sperm in Prochilodus lineatus.

Permafrost soil characteristics and microbial community structure across a boreal forest watershed vary over short spatial scales and dictate community responses to thaw.

NASA Astrophysics Data System (ADS)

Stegen, J.; Bottos, E. M.; Kennedy, D.; Romero, E. B.; Fansler, S.; Chu, R. K.; Tfaily, M.; Jansson, J.; Bernstein, H. C.; Brown, J. M.; Markillie, L. M.

2017-12-01

Understanding drivers of permafrost microbial community structure and function is critical for understanding permafrost microbiology and predicting ecosystem responses to thaw; however, studies describing ecological controls on these communities are lacking. We hypothesize that permafrost communities are uniquely shaped by constraints imposed by prolonged freezing, and decoupled from the selective factors that influence non-permafrost soil communities, but that pre-thaw environmental and community characteristics will be strong determinants of community structure and function post-thaw. We characterized patterns of environmental variation and microbial community composition in sixty permafrost samples spanning landscape gradients in a boreal forest watershed, and monitored community responses to thaw. Consistent with our hypothesis, we found that, proportionally, the strongest process influencing permafrost community composition was dispersal limitation (0.36), exceeding the influence of homogenous selection (0.21) and variable selection (0.16), and that deterministic selection arose primarily from energetic constraints of the permafrost environment. Our data supported a structural equation model in which organic carbon thermodynamics and organic acid content, influenced redox conditions and total selection. Post-thaw community composition was found to be driven primarily by pre-thaw community composition, indicating a strong influence of historical conditions. Together, these results suggest that community responses to thaw may be highly varied over short distances and that changes in community structure and function are likely to be drastic, as changes to system hydrology mobilize organisms and nutrients, thereby relieving the primary constraints on the system. These findings are being integrated with metabolomic and metatranscriptomic analyses to improve understanding of how pre-thaw conditions can be used to predict microbial activity post-thaw.

Application of Spaceborne Scatterometer for Mapping Freeze-Thaw State in Northern Landscapes as a Measure of Ecological and Hydrological Processes

NASA Technical Reports Server (NTRS)

McDonald, Kyle; Kimball, John; Zimmermann, Reiner; Way, JoBea; Frolking, Steve; Running, Steve

1999-01-01

Landscape freeze/thaw transitions coincide with marked shifts in albedo, surface energy and mass exchange, and associated snow dynamics. Monitoring landscape freeze/thaw dynamics would improve our ability to quantify the interannual variability of boreal hydrology and river runoff/flood dynamics. The annual duration of frost-free period also bounds the period of photosynthetic activity in boreal and arctic regions thus affecting the annual carbon budget and the interannual variability of regional carbon fluxes. In this study, we use the NASA scatterometer (NSCAT) to monitor the temporal change in the radar backscatter signature across selected ecoregions of the boreal zone. We have measured vegetation tissue temperatures, soil temperature profiles, and micrometeorological parameters in situ at selected sites along a north-south transect extending across Alaska from Prudhoe Bay to the Kenai Peninsula and in Siberia near the Yenisey River. Data from these stations have been used to quantify the scatterometer's sensitivity to freeze/thaw state under a variety of terrain and landcover conditions. Analysis of the NSCAT temporal response over the 1997 spring thaw cycle shows a 3 to 5 dB change in measured backscatter that is well correlated with the landscape springtime thaw process. Having verified the instrument's capability to monitor freeze/thaw transitions, regional scale mosaicked data are applied to derive temporal series of freeze/thaw transition maps for selected circumpolar high latitude regions. These maps are applied to derive areal extent of frozen and thawed landscape and demonstrate the utility of spaceborne radar for operational monitoring of seasonal freeze-thaw dynamics and associated biophysical processes for the circumpolar high latitudes.

Present Permafrost Thaw in Central Yakutia, North-East Siberia: Surficial Geology and Hydrology Evidence

NASA Astrophysics Data System (ADS)

Czerniawska, Jolanta; Chlachula, Jiri

2017-04-01

Current climate change in the high-latitudes of Eurasia is a generally accepted phenomenon characterized by increased annual temperature values and marked weather anomalies observed in the sub-polar and polar regions. In the northern and NE Siberia, this trend of the MAT rise, documented particularly over the last three decades, is believed to account for the territorial lowland as well as insular mountain frozen ground thaw that in turn has triggered ecosystem feedbacks on the local as well as regional scales. In the northern regions of Yakutia, this is principally witnessed by accelerated near-surface dynamics of seasonally activated de-freezing grounds and inter-linked geomorphic and hydrological actions affecting large-scale tundra landscape settings. In the southern and central taiga-forest areas with perennial alpine and continuous permafrost conditions, respectively, an increased depth of the seasonally melted top-soil layers has become evident accompanied by thermokarst lake expansion and ground surface collapsing. Some cryogenic depressions generated from small gullies over the past decades eloquently demonstrate the intensity and scales of the current permafrost degradation in the Siberian North. The fluvial discharge is most dynamic in late spring to mid-summer because of the cumulative effect of snow-melting because of a high solar radiation and short intervals of torrential rains. Yet, the climate-change-dependent and most active geomorphic agent is the accelerated permafrost thaw seen in landslides and tundra-forest cover decay due to a higher water table. Numerous preserved biotic fossiliferous records Pleistocene and early Holocene in age are being exposed in this process providing unique palaeoecology evidence at particular sites. These climate-generated processes have mostly highly negative effects to the natural habitats (migratory animal routes and riverine biota due to an earlier ice-melting) as well as the local settlement communities (infrastructure destruction resulting from the top-ground melt-water saturation, road-base disintegration, slope slumping, drinking water supply, etc.).

High-resolution Mapping of Permafrost and Soil Freeze/thaw Dynamics in the Tibetan Plateau Based on Multi-sensor Satellite Observations

NASA Astrophysics Data System (ADS)

Zhang, W.; Yi, Y.; Yang, K.; Kimball, J. S.

2016-12-01

The Tibetan Plateau (TP) is underlain by the world's largest extent of alpine permafrost ( 2.5×106 km2), dominated by sporadic and discontinuous permafrost with strong sensitivity to climate warming. Detailed permafrost distributions and patterns in most of the TP region are still unknown due to extremely sparse in-situ observations in this region characterized by heterogeneous land cover and large temporal dynamics in surface soil moisture conditions. Therefore, satellite-based temperature and moisture observations are essential for high-resolution mapping of permafrost distribution and soil active layer changes in the TP region. In this study, we quantify the TP regional permafrost distribution at 1-km resolution using a detailed satellite data-driven soil thermal process model (GIPL2). The soil thermal model is calibrated and validated using in-situ soil temperature/moisture observations from the CAMP/Tibet field campaign (9 sites: 0-300 cm soil depth sampling from 1997-2007), a multi-scale soil moisture and temperature monitoring network in the central TP (CTP-SMTMN, 57 sites: 5-40 cm, 2010-2014) and across the whole plateau (China Meteorology Administration, 98 sites: 0-320 cm, 2000-2015). Our preliminary results using the CAMP/Tibet and CTP-SMTMN network observations indicate strong controls of surface thermal and soil moisture conditions on soil freeze/thaw dynamics, which vary greatly with underlying topography, soil texture and vegetation cover. For regional mapping of soil freeze/thaw and permafrost dynamics, we use the most recent soil moisture retrievals from the NASA SMAP (Soil Moisture Active Passive) sensor to account for the effects of temporal soil moisture dynamics on soil thermal heat transfer, with surface thermal conditions defined by MODIS (Moderate Resolution Imaging Spectroradiometer) land surface temperature records. Our study provides the first 1-km map of spatial patterns and recent changes of permafrost conditions in the TP.

Calibrated Hydrothermal Parameters, Barrow, Alaska, 2013

DOE Data Explorer

Atchley, Adam; Painter, Scott; Harp, Dylan; Coon, Ethan; Wilson, Cathy; Liljedahl, Anna; Romanovsky, Vladimir

2015-01-29

A model-observation-experiment process (ModEx) is used to generate three 1D models of characteristic micro-topographical land-formations, which are capable of simulating present active thaw layer (ALT) from current climate conditions. Each column was used in a coupled calibration to identify moss, peat and mineral soil hydrothermal properties to be used in up-scaled simulations. Observational soil temperature data from a tundra site located near Barrow, AK (Area C) is used to calibrate thermal properties of moss, peat, and sandy loam soil to be used in the multiphysics Advanced Terrestrial Simulator (ATS) models. Simulation results are a list of calibrated hydrothermal parameters for moss, peat, and mineral soil hydrothermal parameters.

Rooting depth distribution and nitrogen acquisition using 15N tracer, Barrow, Alaska, 2013

DOE Office of Scientific and Technical Information (OSTI.GOV)

Colleen Iversen

Permafrost thaw and degradation may lead to altered thickness of the active soil layer and a changing distribution of plant-available nutrients throughout the soil, but little is known about the nutrient acquisition strategies of dominant tundra plant species. We conducted an 15N isotope tracer experiment to assess the vertical distribution of nutrient acquisition among three dominant species representing important plant functional types (PFTs) on the Barrow Environmental Observatory (BEO) in Barrow, Alaska. We found that vertical patterns of root distribution and nutrient acquisition varied among plant species, and that root density may not entirely explain patterns of nutrient acquisition formore » all species.« less

Microtopographic Evidence of Hillslope Susceptibility to Active Layer Detachments and Rapid Soil Erosion in Permafrost-dominated Watersheds

NASA Astrophysics Data System (ADS)

Rowland, J. C.; Shelef, E.; Sutfin, N. A.; Piliouras, A.; Andresen, C. G.; Wilson, C. J.

2017-12-01

Movement and storage rates of soil and carbon along permafrost-dominated hillslopes may vary dramatically from long-term steady creeping, at centimeters per year, to rapid gullying, land sliding, and active layer detachments of meter to decimeter sized portions of hillslopes. The rate and drivers of hillslope soil processes may have strong feedbacks on microtopography and hydrology that in turn strongly influence vegetation dynamics and biogeochemistry within watersheds. We observed evidence of both steady soil creep and more catastrophic soil erosion processes occurring across three small watersheds in the southern Seward Peninsula, AK. In these watersheds, we inferred active soil creep processes from the occurrence of solifluction lobes with partially buried shrubs and tilted survey benchmarks on slopes lacking lobes. More dramatic and rapid erosion of soils was evidenced by active layer detachments, extensional cracks in the tundra vegetation, gullying, and both small- and large-scale soil failure scarps. The margins and heads of valley hollows exhibited failure scars up to 4m in height. The spatial distribution of actively eroding areas suggests that some portions of hilllslopes may be more susceptible to rapid erosion. Coring of hillslope soils suggests a possible association between more actively eroding areas and the presence of an ice-rich layer (> 50%) at depths of approximately 90 cm down to the inferred top of bedrock at depths at 170 to 200 cm. We observed that the surface of these hillslope regions appears to have greater microtopographic roughness with a more chaotic and "lumpy" surface than portions of the hillslope were no massive ice layers were encountered. We hypothesize that the extensional cracking and chaotic surface roughness may arise from small-scale soil failures triggered when the seasonal thaw depth intersects the ice-rich layer. It may be possible to identify hillslope regions underlain by ice-rich layers with greater susceptibility for localized erosion and deformation based on a quantitative characterization of the hillslope microtopography. Using drone-based LiDAR topographic data to be acquired in late summer of 2017, we will quantitatively explore the relationship between microtopography and hillslope ice-content.

Study of the Northern Qinghai-Tibetan Plateau Permafrost Active Layer Depth Rate Using Satellite Geodetic Observations

NASA Astrophysics Data System (ADS)

Jia, Y.; Su, X.; Shum, C. K.; Kim, J. W.; Kuo, C. Y.

2015-12-01

The Tibetan Plateau is the world's largest and the highest plateau with distinct and competing surface and subsurface processes. It is the Third Pole and the World Water Tower, owing to its vast ice reservoir with the largest number of glaciers in the world, and covered by a large (1.3 to 1.6 million km2) layer of discontinuous and sporadic alpine permafrost. The thawing over Tibetan Plateau permafrost regions is thought to be more severe compared with other high latitude permafrost regions by the fact that the permafrost is warm. During the past few decades, 82% of Tibetan Plateau glaciers have retreated and 10% permafrost has degraded. The overall mean active layer depth (ALD) rate increase over the Plateau is 1.4 cm yr-1, 1980-2001, based on model studies and comparison with in situ borehole data. Here we report on the work in progress to quantify ALD rate increase in the northern Tibetan Plateau near the Tibetan national highway, using multi-band SAR/InSAR for improved the thermokarst surface classification, Envisat radar altimetry and ALOS-1 InSAR observed land subsidence, ALD modeling for the various thermokarst surface to relate to subsidence measurements, and the associated validations using available in situ borehole subsidence measurements.

Embolism Formation during Freezing in the Wood of Picea abies1

PubMed Central

Mayr, Stefan; Cochard, Hervé; Améglio, Thierry; Kikuta, Silvia B.

2007-01-01

Freeze-thaw events can cause embolism in plant xylem. According to classical theory, gas bubbles are formed during freezing and expand during thawing. Conifers have proved to be very resistant to freeze-thaw induced embolism, because bubbles in tracheids are small and redissolve during thawing. In contrast, increasing embolism rates upon consecutive freeze-thaw events were observed that cannot be explained by the classical mechanism. In this study, embolism formation during freeze-thaw events was analyzed via ultrasonic and Cryo-scanning electron microscope techniques. Twigs of Picea abies L. Karst. were subjected to up to 120 freeze-thaw cycles during which ultrasonic acoustic emissions, xylem temperature, and diameter variations were registered. In addition, the extent and cross-sectional pattern of embolism were analyzed with staining experiments and Cryo-scanning electron microscope observations. Embolism increased with the number of freeze-thaw events in twigs previously dehydrated to a water potential of −2.8 MPa. In these twigs, acoustic emissions were registered, while saturated twigs showed low, and totally dehydrated twigs showed no, acoustic activity. Acoustic emissions were detected only during the freezing process. This means that embolism was formed during freezing, which is in contradiction to the classical theory of freeze-thaw induced embolism. The clustered pattern of embolized tracheids in cross sections indicates that air spread from a dysfunctional tracheid to adjacent functional ones. We hypothesize that the low water potential of the growing ice front led to a decrease of the potential in nearby tracheids. This may result in freezing-induced air seeding. PMID:17041033

Transformation of Upland Water and Carbon Dynamics by Thawing Permafrost in the Alaskan Interior

NASA Astrophysics Data System (ADS)

Ewing, S. A.; Paces, J. B.; O'Donnell, J. A.; Kanevskiy, M. Z.; Shur, Y.; Jorgenson, M. T.; Harden, J.; Aiken, G. R.; Striegl, R.

2009-05-01

Large arctic rivers can provide an integrated signal of regional permafrost thaw and associated carbon dynamics. A long-term (30-y) decrease in dissolved organic carbon (DOC) and increase in dissolved inorganic carbon in the Yukon River Basin (YRB) suggest increased flow through mineral soils as a result of permafrost thaw. We used U series isotopes to test for the influence of thaw on soil and surface waters in small upland catchments at two sites within the YRB. In natural waters, 234U/238U activity ratios exceed 1.00 (secular equilibrium) as a function of water-rock contact time. Previous work has shown that in major YRB rivers, seasonally and spatially variable 234U/238U ratios could indicate both groundwater inputs and permafrost thaw, with ratios ranging from 1.1 to 2.6. We show that 234U/238U ratios in soil and surface water from these small catchments span the range of values observed in the major rivers, and indicate greater influence of older water where the mineral soil and underlying sediment facilitate drainage and permafrost degradation. Analysis of deep, ice-rich loess permafrost cores (2-10 m) reveals that thaw of Pleistocene ice can release high concentrations of DOC (>1000 ppm) and ammonium in thaw waters. The age and chemical composition of these waters allows for improved prediction of downstream carbon dynamics upon thaw. Field observation of hillslope soil sequences indicates that both topography and mineral substrate influence the effects of thaw on water and carbon dynamics in small catchments.

Rapid Permafrost Carbon Degradation at the Land-Ocean Interface

NASA Astrophysics Data System (ADS)

Tanski, G.

2015-12-01

Climate change has a strong impact on permafrost coasts in the Arctic. With increasing air and water temperatures, the ice-rich unlithified permafrost coasts will thaw and erode at a greater pace. Organic carbon that has been stored for thousands of years is mobilized and degrades on its way to the ocean. The objective of this study is to investigate to what extent permafrost carbon degrades after thawing before it enters the ocean in a retrogressive thaw slump. A slump located on Herschel Island (Yukon Territory, Canada) was sampled systematically along transects from the permafrost headwall to the coastline. Concentrations of particulate and dissolved organic carbon (POC and DOC) as well as its stable carbon isotopes (δ13C-POC and δ13C-DOC) were measured and compared in frozen deposits and in thawed sediments. Ammonium, nitrite and nitrate were also analyzed in order to identify and understand the carbon metabolization mechanisms taking place during slump activity. Our results show that major portions of permafrost carbon are metabolized right after thawing. Ammonium concentrations are highest in areas where thawed permafrost material directly accumulates. We suggest that before entering the nearshore zone permafrost organic carbon and nitrogen is subject to major degradation and metabolization. This makes permafrost coasts and retrogressive thaw slumps degradation hotspots at the land-ocean-interface.

Use of ground-based radiometers for L-Band Freeze/Thaw retrieval in a boreal forest site

NASA Astrophysics Data System (ADS)

Roy, A.; Sonnentag, O.; Derksen, C.; Toose, P.; Pappas, C.; Mavrovic, A.; El Amine, M.; Royer, A.; Berg, A. A.; Rowlandson, T. L.; Barr, A.; Black, T. A.

2017-12-01

The boreal forest is the second largest land biome in the world and thus plays a major role in the global and regional climate systems. The extent, timing and duration of the seasonal freeze/thaw (F/T) state influences vegetation developmental stages (phenology) and, consequently, constitutes an important control on how boreal forest ecosystems exchange carbon, water and energy with the atmosphere. Recently, new L-Band satellite-derived F/T information has become available. However, disentangling the seasonally differing contributions from forest overstory and understory vegetation, and the ground surface to the satellite signal remains challenging. Here we present results from an ongoing campaign with two L-Band surface-based radiometers (SBR) installed on a micrometeorological tower at the Southern Old Black Spruce site (53.99°N / 105.12°W) in central Saskatchewan. One radiometer unit is installed on top of the tower viewing the multi-layer vegetation canopy from above. A second radiometer unit is installed within the multi-layer canopy, viewing the understory and the ground surface only. The objectives of our study are to (i) disentangle the L-Band F/T signal contribution of boreal forest overstory from the combined understory and ground surface contribution, and (ii) link the L-Band F/T signal to related boreal forest structural and functional characteristics. Analysis of these radiometer measurements made from September to November 2016 shows that when the ground surface is thawed, the main contributor to both radiometer signals is soil moisture. The Pearson correlation coefficient between brightness temperature (TB) at vertical polarization (V-pol) and soil permittivity is 0.79 for the radiometer above the canopy and 0.74 for the radiometer below the canopy. Under cold conditions when the soil was thawed (snow insulation) and the trees were frozen (below 0°C), TB at V-pol is negatively correlated with tree permittivity. The freezing tree contribution to the L-Band signal is however confirmed with L-Band coaxial probe measurements that show significant changes in tree L-Band permittivity when the tree temperature falls below 0 °C. This study will help develop freeze/thaw product and ecosystemic processes in boreal forest from satellite based remote sensing.

[Modeling the Propagation of Microbial Cells and Phage Particles from the Sites of Permafrost Thawing.

PubMed

Skladnev, D A; Mulyukin, A L; Filippoval, S N; Kulikov, E E; Letaroval, M A; Yuzbasheva, E A; Karnysheva, E A; Brushkov, A V; Gal'chenko, V F

2016-09-01

A method is proposed for integral assessment of the propagation of microbial cells and viral parti- cles during seasonal thawing of relic ice wedge layers. The results of on-site and laboratory investigation car- ried out in the upper part of permafrost exposure at Mamontova Gora (Yakutiya, Russia) are presented. To increase reliability of the results, suspensions of two microbial species and two coliphage species were intro- duced as biomarkers directly on the surface of thaing ice and in the meltwater flow. Each of the four different model biological objects was shown to possess unique parameters of movement in the meltwater flow and is able to move 132 m in 25-35 min with the water flow.

Modeling carbon and nitrogen biogeochemistry in forest ecosystems

Treesearch

Changsheng Li; Carl Trettin; Ge Sun; Steve McNulty; Klaus Butterbach-Bahl

2005-01-01

A forest biogeochemical model, Forest-DNDC, was developed to quantify carbon sequestration in and trace gas emissions from forest ecosystems. Forest-DNDC was constructed by integrating two existing moels, PnET and DNDC, with several new features including nitrification, forest litter layer, soil freezing and thawing etc, PnET is a forest physiological model predicting...

Thermal stability analysis under embankment with asphalt pavement and cement pavement in permafrost regions.

PubMed

Junwei, Zhang; Jinping, Li; Xiaojuan, Quan

2013-01-01

The permafrost degradation is the fundamental cause generating embankment diseases and pavement diseases in permafrost region while the permafrost degradation is related with temperature. Based on the field monitoring results of ground temperature along G214 Highway in high temperature permafrost regions, both the ground temperatures in superficial layer and the annual average temperatures under the embankment were discussed, respectively, for concrete pavements and asphalt pavements. The maximum depth of temperature field under the embankment for concrete pavements and asphalt pavements was also studied by using the finite element method. The results of numerical analysis indicate that there were remarkable seasonal differences of the ground temperatures in superficial layer between asphalt pavement and concrete pavement. The maximum influencing depth of temperature field under the permafrost embankment for every pavement was under the depth of 8 m. The thawed cores under both embankments have close relation with the maximum thawed depth, the embankment height, and the service time. The effective measurements will be proposed to keep the thermal stabilities of highway embankment by the results.

Thermal Stability Analysis under Embankment with Asphalt Pavement and Cement Pavement in Permafrost Regions

PubMed Central

Jinping, Li; Xiaojuan, Quan

2013-01-01

The permafrost degradation is the fundamental cause generating embankment diseases and pavement diseases in permafrost region while the permafrost degradation is related with temperature. Based on the field monitoring results of ground temperature along G214 Highway in high temperature permafrost regions, both the ground temperatures in superficial layer and the annual average temperatures under the embankment were discussed, respectively, for concrete pavements and asphalt pavements. The maximum depth of temperature field under the embankment for concrete pavements and asphalt pavements was also studied by using the finite element method. The results of numerical analysis indicate that there were remarkable seasonal differences of the ground temperatures in superficial layer between asphalt pavement and concrete pavement. The maximum influencing depth of temperature field under the permafrost embankment for every pavement was under the depth of 8 m. The thawed cores under both embankments have close relation with the maximum thawed depth, the embankment height, and the service time. The effective measurements will be proposed to keep the thermal stabilities of highway embankment by the results. PMID:24027444

Evaluation of the Committed Carbon Emissions and Global Warming due to the Permafrost Carbon Feedback

NASA Astrophysics Data System (ADS)

Elshorbany, Y. F.; Schaefer, K. M.; Jafarov, E. E.; Yumashev, D.; Hope, C.

2017-12-01

We quantify the increase in carbon emissions and temperature due to Permafrost Carbon feedback (PCF), defined as the amplification of anthropogenic warming due to carbon emissions from thawing permafrost (i.e., of near-surface layers to 3 m depth). We simulate the Committed PCF emissions, the cumulative total emissions from thawing permafrost by 2300 for a given global temperature increase by 2100, and investigate the resulting global warming using the Simple Biosphere/Carnegie-Ames-Stanford Approach SiBCASA model. We estimate the committed PCF emissions and warming for the Fifth Assessment Report, Representative Concentration Pathway scenarios 4.5 and 8.5 using two ensembles of five projections. For the 2 °C warming target of the global climate change treaty, committed PCF emissions increase to 24 Gt C by 2100 and 76 Gt C by 2300 and the committed PCF warming is 0.23 °C by 2300. Our calculations show that as the global temperature increase by 2100 approaches 5.8 °C, the entire stock of frozen carbon thaws out, resulting in maximum committed PCF emissions of 560 Gt C by 2300.

Conceptualization and Simulation of the Alaskan Arctic Tundra Landscape Evolution Using the Alaska Thermokarst Model

NASA Astrophysics Data System (ADS)

Bolton, W. R.; Lara, M. J.; Genet, H.; Romanovsky, V. E.; McGuire, A. D.

2016-12-01

The Arctic, including Alaska, is currently undergoing a change in climate, with observed increases in both mean surface temperature and precipitation. The combination of these increases in precipitation and temperature has resulted in a permafrost condition that is susceptible to thermokarst. Changes in the landscape due to thermokarst takes place whenever ice-rich permafrost thaws and the land surface subsides due to the volume loss when ground-ice transitions to water. The important processes associated with thermokarst include surface ponding, changes in topography, vegetation distribution, soil moisture conditions, drainage patterns, and related erosion. The Alaska Thermokarst Model (ATM) is a large-scale, state-and-transition model designed to simulate transitions between landscape units affected by thermokarst disturbance. The ATM using a frame-based methodology to track cohorts transitions and their respective proportions within each model grid cell. In the arctic tundra environment, the ATM tracks thermokarst related transitions among wetland tundra, graminoid tundra,shrub tundra and lakes. The transition from one cohort to another due to thermokarst processes can take place if thaw reaches ice-rich ground layers either due to pulse disturbance or due to gradual active layer deepening that eventually results in penetration of the protective layer. The protective layer buffers the ice-rich soils from the land surface and is critical to determine how susceptible an area is to thermokarst degradation. The initial landcover distribution is based upon analysis of compiled remote sensing data sets at 30-m resolution. Remote sensing analysis and field measurements from previous and ongoing studies are used to determine the ice-content of the soil, the drainage efficiency (or the ability of the landscape to store or transport water), the cumulative probability of thermokarst initiation, distance from rivers, lake dynamics (increasing, decreasing, or stable), and other factors which help determine landscape transition rates. Tundra types are allowed to transition from one type to another (for example, wetland tundra to graminoid tundra) under favorable climatic conditions. In this study, we present our conceptualization and initial simulation results from in the arctic regions of Alaska.

Freeze-thaw and high-voltage discharge allow macromolecule uptake into ileal brush-border vesicles

DOE Office of Scientific and Technical Information (OSTI.GOV)

Donowitz, M.; Emmer, E.; McCullen, J.

1987-06-01

High-voltage discharge or one cycle of freeze-thawing are shown to transiently permeabilize rabbit ileal brush-border membrane vesicles to macromolecules. Uptake of the radiolabeled macromolecule dextran, mol wt 70,000, used as a marker for vesicle permeability, was determined by a rapid filtration technique, with uptake defined as substrate associated with the vesicle and releasable after incubation of vesicles with 0.1% saponin. Dextran added immediately after electric shock (2000 V) or at the beginning of one cycle of freeze-thawing was taken up approximately eightfold compared with control. ATP also was taken up into freeze-thawed vesicles, whereas there was no significant uptake intomore » control vesicles. The increase in vesicle permeability was reversible, based on Na-dependent D-glucose uptake being decreased when studied 5 but not 15 min after electric shock, and was not significantly decreased after completion of one cycle of freeze-thawing. In addition, adenosine 3',5'-cyclic monophosphate and Ca/sup 2 +/-calmodulin-dependent protein kinase activity were similar in control vesicles and vesicles exposed to high-voltage discharge or freeze-thawing. Also, vesicles freeze-thawed with (/sup 32/P)ATP demonstrated increased phosphorylation compared with nonfrozen vesicles, while freeze-thawing did not alter vesicle protein as judged by Coomassie blue staining. These techniques should allow intestinal membrane vesicles to be used for studies of intracellular control of transport processes, for instance, studies of protein kinase regulation of transport.« less

Thermal regime of active layer at two lithologically contrasting sites on James Ross Island, Antarctic Peninsula.

NASA Astrophysics Data System (ADS)

Hrbáček, Filip; Nývlt, Daniel; Láska, Kamil

2016-04-01

Antarctic Peninsula region (AP) represents one of the most rapidly warming parts of our planet in the last 50 years. Despite increasing research activities along both western and eastern sides of AP in last decades, there is still a lot of gaps in our knowledge relating to permafrost, active layer and its thermal and physical properties. This study brings new results of active layer monitoring on James Ross Island, which is the largest island in northern AP. Its northern part, Ulu Peninsula, is the largest ice-free area (more than 200 km2) in the region. Due its large area, we focused this study on sites located in different lithologies, which would affect local thermal regime of active layer. Study site (1) at Abernethy Flats area (41 m a.s.l.) lies ~7 km from northern coast. Lithologically is formed by disintegrated Cretaceous calcareous sandstones and siltstones of the Santa Marta Formation. Study site (2) is located at the northern slopes of Berry Hill (56 m a.s.l.), about 0.4 km from northern coastline. Lithology is composed of muddy to intermediate diamictites, tuffaceous siltstones to fine grained sandstones of the Mendel Formation. Data of air temperature at 2 meters above ground and the active layer temperatures at 75 cm deep profiles were obtained from both sites in period 1 January 2012 to 31 December 2014. Small differences were found when comparing mean air temperatures and active temperatures at 5 and 75 cm depth in the period 2012-2014. While the mean air temperatures varied between -7.7 °C and -7.0 °C, the mean ground temperatures fluctuated between -6.6 °C and -6.1 °C at 5 cm and -6.9 °C and -6.0 °C at 75 cm at Abernethy Flats and Berry Hill slopes respectively. Even though ground temperature differences along the profiles weren't pronounced during thawing seasons, the maximum active layer thickness was significantly larger at Berry Hill slopes (80 to 82 cm) than at Abernethy Flats (52 to 64 cm). We assume this differences are affected by local lithology, especially by the higher proportion of fine particles and more thermally conductive minerals, together with higher water saturation are fundamental for higher maximum active layer thickness found at Berry Hill slopes.

Isotopic identification of soil and permafrost nitrate sources in an Arctic tundra ecosystem

DOE PAGES

Heikoop, Jeffrey M.; Throckmorton, Heather M.; Newman, Brent D.; ...

2015-06-08

The nitrate (NO₃⁻) dual isotope approach was applied to snowmelt, tundra active layer pore waters, and underlying permafrost in Barrow, Alaska, USA, to distinguish between NO₃⁻ derived from at NO₃⁻ signal with δ¹⁵N averaging –4.8 ± 1.0‰ (standard error of the mean) and δ¹⁸O averaging 70.2 ±1.7‰. In active layer pore waters, NO₃⁻ primarily occurred at concentrations suitable for isotopic analysis in the relatively dry and oxic centers of high-centered polygons. The average δ¹⁵N and δ¹⁸O of NO₃⁻ from high-centered polygons were 0.5 ± 1.1‰ and –4.1 ± 0.6‰, respectively. When compared to the δ¹⁵N of reduced nitrogen (N) sources,more » and the δ¹⁸O of soil pore waters, it was evident that NO₃⁻ in high-centered polygons was primarily from microbial nitrification. Permafrost NO₃⁻ had δ¹⁵N ranging from approximately –6‰ to 10‰, similar to atmospheric and microbial NO₃⁻, and highly variable δ¹⁸O ranging from approximately –2‰ to 38‰. Permafrost ice wedges contained a significant atmospheric component of NO₃⁻, while permafrost textural ice contained a greater proportion of microbially derived NO₃⁻. Large-scale permafrost thaw in this environment would release NO₃⁻ with a δ¹⁸O signature intermediate to that of atmospheric and microbial NO₃. Consequently, while atmospheric and microbial sources can be readily distinguished by the NO₃⁻ dual isotope technique in tundra environments, attribution of NO₃⁻ from thawing permafrost will not be straightforward. The NO₃⁻ isotopic signature, however, appears useful in identifying NO₃⁻ sources in extant permafrost ice.« less

Fertility and flow cytometric evaluations of frozen-thawed rooster semen in cryopreservation medium containing low-density lipoprotein.

PubMed

Shahverdi, A; Sharafi, M; Gourabi, H; Yekta, A Amiri; Esmaeili, V; Sharbatoghli, M; Janzamin, E; Hajnasrollahi, M; Mostafayi, F

2015-01-01

Frozen-thawed rooster semen is not reliable for use in artificial insemination in commercial stocks. Low-density lipoprotein (LDL) has been assessed for effectiveness as a cryoprotectant in the extender to improve the quality of frozen-thawed rooster semen. Although LDL has been evaluated in a few studies in other species for semen cryopreservation, so far no study has been conducted to examine this cryoprotectant for cryopreservation of fowl semen. Thus, this study aims to analyze the effects of different concentrations of LDL (0%, 2%, 4%, 6%, and 8%) in a Beltsville extender for cryopreservation of rooster spermatozoa. In experiment 1, motion parameters, membrane integrity, acrosome integrity, apoptosis status, and mitochondria activity were assessed after freeze-thawing. The highest quality frozen-thawed semen was selected to be used for evaluation of the fertility rate in experiment 2. Semen was collected from six roosters, twice weekly, then extended in a Beltsville extender that contained different concentrations of LDL as follows: 0% (control), 1% (Beltsville plus 1% LDL [BLDL1]), 2% (BLDL2), 4% (BLDL4), 6% (BLDL6), and 8% (BLDL8). Supplementation of the Beltsville extender with 4% LDL produced the most significant percentage of motility (43.1 ± 1.3), membrane integrity (59.4 ± 2.1),mitochondria activity (49.1 ± 1.19), and viable spermatozoa (45 ± 2.28) compared with the control treatment with the results of 22.7 ± 1.3 (motility), 38.4 ± 2.1 (membrane integrity), 40.25 ± 1.19 (mitochondrial activity), and 37.8 ± 2.28 (viability). In experiment 2, a significantly higher percentage of fertility rate was observed for frozen-thawed semen in the extender supplemented with 4% LDL (49.5 ± 1.6) compared with the control (29.2 ± 2.9). Progressive motility and acrosome integrity were not affected by LDL levels in the extenders. The results revealed that supplementation of the Beltsville extender with 4% LDL resulted in higher quality of frozen-thawed rooster sperm.

Rising plant-mediated methane emissions from arctic wetlands

DOE Office of Scientific and Technical Information (OSTI.GOV)

Andresen, Christian G.; Lara, Mark J.; Tweedie, Craig E.

Plant-mediated CH 4 flux is an important pathway for land–atmosphere CH 4 emissions, but the magnitude, timing, and environmental controls, spanning scales of space and time, remain poorly understood in arctic tundra wetlands, particularly under the long-term effects of climate change. CH 4 fluxes were measured in situ during peak growing season for the dominant aquatic emergent plants in the Alaskan arctic coastal plain, Carex aquatilis and Arctophila fulva, to assess the magnitude and species-specific controls on CH 4 flux. Plant biomass was a strong predictor of A. fulva CH 4 flux while water depth and thaw depth were copredictorsmore » for C. aquatilis CH 4 flux. Here, we used plant and environmental data from 1971 to 1972 from the historic International Biological Program (IBP) research site near Barrow, Alaska, which we resampled in 2010–2013, to quantify changes in plant biomass and thaw depth, and used these to estimate species-specific decadal-scale changes in CH 4 fluxes. A ~60% increase in CH 4 flux was estimated from the observed plant biomass and thaw depth increases in tundra ponds over the past 40 years. In spite of our covering only ~5% of the landscape, we estimate that aquatic C. aquatilis and A. fulva account for two-thirds of the total regional CH 4 flux of the Barrow Peninsula. The regionally observed increases in plant biomass and active layer thickening over the past 40 years not only have major implications for energy and water balance, but also have significantly altered land–atmosphere CH 4 emissions for this region, potentially acting as a positive feedback to climate warming.« less

Towards a better understanding of the sensitivity of permafrost and soil carbon to climate and disturbance-induced change in Alaska

NASA Astrophysics Data System (ADS)

Pastick, N. J.; Jorgenson, T.; Wylie, B. K.; Minsley, B. J.; Brown, D. N.; Genet, H.; Johnson, K. D.; McGuire, A. D.; Kass, A.; Knight, J. F.

2015-12-01

Recent increases in air temperature and disturbance activity have led to amplified rates of permafrost degradation and carbon remobilization across portions of Alaska. Further warming, coupled with increases in disturbance frequency and severity (i.e. wildfire, thermokarst), may exacerbate permafrost thaw and disappearance, which would have a profound effect on high-latitude ecological and socio-economic systems. Here we present research aimed at characterizing the sensitivity of different permafrost landscapes to climate and disturbance-induced change through a compilation of in-situ observations, remote sensing and geophysical data, time series analyses, and spatio-temporal modeling. Our data-driven approach allowed for the development of a quantitative assessment of permafrost's potential response to climate change. This analysis also identified indicators of permafrost's susceptibility to disturbances in Alaska. Initial results suggest that further climate-induced permafrost degradation is most likely to occur in regions characterized by discontinuous permafrost and transition zones between tundra, boreal, and temperate forest ecosystems. Permafrost-affected soils, underlying upland ecosystems, are typically more prone to climate and fire-induced change than lowland ecosystems with relatively thicker organic soil layers. However, field and geophysical data indicate that carbon rich silty lowlands are also prone to deep permafrost thaw (> 5 m) following severe disturbance. Because a substantial amount of frozen soil carbon will become susceptible to decomposition upon permafrost thaw, we combined recently developed permafrost carbon maps and future projections of permafrost distribution to highlight areas that may become potential emission hotspots under warmer temperatures. Despite advances in understanding of the drivers of ecological change, more work is needed to integrate studies that link observations of permafrost dynamics to factors that drive those dynamics.

Rising plant-mediated methane emissions from arctic wetlands

DOE PAGES

Andresen, Christian G.; Lara, Mark J.; Tweedie, Craig E.; ...

2016-09-14

Plant-mediated CH 4 flux is an important pathway for land–atmosphere CH 4 emissions, but the magnitude, timing, and environmental controls, spanning scales of space and time, remain poorly understood in arctic tundra wetlands, particularly under the long-term effects of climate change. CH 4 fluxes were measured in situ during peak growing season for the dominant aquatic emergent plants in the Alaskan arctic coastal plain, Carex aquatilis and Arctophila fulva, to assess the magnitude and species-specific controls on CH 4 flux. Plant biomass was a strong predictor of A. fulva CH 4 flux while water depth and thaw depth were copredictorsmore » for C. aquatilis CH 4 flux. Here, we used plant and environmental data from 1971 to 1972 from the historic International Biological Program (IBP) research site near Barrow, Alaska, which we resampled in 2010–2013, to quantify changes in plant biomass and thaw depth, and used these to estimate species-specific decadal-scale changes in CH 4 fluxes. A ~60% increase in CH 4 flux was estimated from the observed plant biomass and thaw depth increases in tundra ponds over the past 40 years. In spite of our covering only ~5% of the landscape, we estimate that aquatic C. aquatilis and A. fulva account for two-thirds of the total regional CH 4 flux of the Barrow Peninsula. The regionally observed increases in plant biomass and active layer thickening over the past 40 years not only have major implications for energy and water balance, but also have significantly altered land–atmosphere CH 4 emissions for this region, potentially acting as a positive feedback to climate warming.« less

Synthesizing the Use of Carbon Isotope (14C and 13C) Approaches to Understand Rates and Pathways for Permafrost C Mobilization and Mineralization

NASA Astrophysics Data System (ADS)

Estop-Aragones, C.; Olefeldt, D.; Schuur, E.

2015-12-01

To better understand the permafrost carbon (C) feedback it is important to synthesize our current knowledge, and knowledge gaps, of how permafrost thaw can cause in situ mineralization or downstream mobilization of aged soil organic carbon (SOC) and the rate of this release. This potential loss of old SOC may occur via gaseous flux of CO2 and CH4 exchanged between soil and the atmosphere and via waterborne flux as DOC, POC (and their subsequent decomposition and release to the atmosphere). Carbon isotope (14C and 13C) approaches have been used to estimate both rates and pathways for permafrost C mobilization and mineralization. Radiocarbon (14C) has been used to estimate the contribution of aged C to overall respiration or waterborne C export. We aim to contrast results from radiocarbon studies, in order to assess differences between ecosystems (contrasting wet and dry ecosystems), thaw histories (active layer deepening or thermokarst landforms), greenhouse gas considered (CO2 and CH4) and seasons. We propose to also contrast methodologies used for assessing the contribution of aged C to overall C balance, and include studies using 13C data. Biological fractionation of 13C during both uptake and decomposition has been taken advantage of both in order to aid the interpretation of 14C data and on its own to assess sources and mineralization pathways. For example, 13C data has been used to differentiate between CH4 production pathways, and the relative contribution of anaerobic CO2 production to overall respiration. Overall, carbon isotope research is proving highly valuable for our understanding of permafrost C dynamics following thaw, and there is a current need to synthesize the available literature.

Rapid disturbances in Arctic permafrost regions (Invited)

NASA Astrophysics Data System (ADS)

Grosse, G.; Romanovsky, V. E.; Arp, C. D.; Jones, B. M.

2013-12-01

Permafrost thaw is often perceived as a slow process dominated by press disturbances such as gradual active layer thickening. However, various pulse disturbances such as thermokarst formation can substantially increase the rate of permafrost thaw and result in rapid landscape change on sub-decadal to decadal time scales. Other disturbances associated with permafrost thaw are even more dynamic and unfold on sub-annual timescales, such as catastrophic thermokarst lake drainage. The diversity of processes results in complex feedbacks with soil carbon pools, biogeochemical cycles, hydrology, and flora and fauna, and requires a differentiated approach when quantifying how these ecosystem componentsare affected,how vulnerablethey are to rapid change, and what regional to global scale impacts result. Here we show quantitative measurements for three examples of rapid pulse disturbances in permafrost regions as observed with remote sensing data time series: The formation of a mega thaw slump (>50 ha) in syngenetic permafrost in Siberia, the formation of new thermokarst ponds in ice-rich permafrost regions in Alaska and Siberia, and the drainage of thermokarst lakes along a gradient of permafrost extent in Western Alaska. The surprising setting and unabated growth of the mega thaw slump during the last 40 years indicates that limited information on panarctic ground ice distribution, abundance, and vulnerability remains a key gap for reliable projections of thermokarst and thermo-erosion impacts, and that the natural limits on the growth and size of thaw slumps are still poorly understood. Observed thermokarst pond formation and expansion in our study regions was closely tied to ice-rich permafrost terrain, such as syngenetic Yedoma uplands, but was also found in old drained thermokarst lake basins with epigenetic permafrost and shallow drained thermokarst lake basins whose ground ice had not been depleted by the prior lake phase. The very different substrates in which new ponds have been forming indicate a broad range of possible biogeochemical feedbacks that require further study. Finally, thermokarst lake drainage observed in regions of continuous permafrost shows that local permafrost degradation, such as thermo-erosional gully formation, may increase permafrost extent in a region, in particular by new permafrost aggradation in freshly exposed, refreezing lake basin sediments. Thermokarst lake drainage across all types of permafrost extent increases habitat diversity, is important for regional biogeochemical cycling, and results in carbon sequestration. While all three disturbance types differ in spatial scale and current abundance, they also point at specific vulnerabilities of permafrost landscapes that are tied to local factors such as ground ice, highlight critical knowledge gaps for predictive ecosystem and biogeochemical models, and indicate the potential for rapid, substantial, and surprising changes in a future warmer Arctic.

Highway pavement performance test for colored thin anti-skidding layers

NASA Astrophysics Data System (ADS)

Gao, Wei; Cui, Wei; Xu, Ming

2018-03-01

Based on the actual service condition of highway pavement colored thin anti-skidding layers, with materials of color quartz sand and two-component acrylic resin as basis, we designed such tests as the bond strength, shearing strength, tear strength, fatigue performance and aggregate polished value, and included the freeze-thaw cycle and de-icing salt and other factors in the experiment, connecting with the climate characteristics of circumpolar latitude and low altitude in Heilongjiang province. Through the pavement performance test, it is confirmed that the colored thin anti-skidding layers can adapt to cold and humid climate conditions, and its physical mechanical properties are good.

Rooster semen cryopreservation: effect of pedigree line and male age on postthaw sperm function.

PubMed

Long, J A; Bongalhardo, D C; Pelaéz, J; Saxena, S; Settar, P; O'Sullivan, N P; Fulton, J E

2010-05-01

The fertility rates of cryopreserved poultry semen are highly variable and not reliable for use in preservation of commercial genetic stocks. Our objective was to evaluate the cryosurvival of semen from 8 pedigreed layer lines at 2 different ages: the onset and end of commercial production. Semen from 160 roosters (20/line) was frozen individually with 11% glycerol at 6 and 12 mo of age. Glycerol was removed from thawed semen by Accudenz gradient centrifugation. The viability of thawed sperm from each male was determined using fluorescent live-dead staining and flow cytometry; sperm velocity parameters were measured using computerized motion analysis. The fertilizing ability of thawed sperm was evaluated in vitro by assessing hydrolysis of the inner perivitelline membrane. The postthaw function of sperm from the elite lines varied widely, despite the fact that fresh semen from all of these lines typically yielded high fertility rates. The percentage of thawed sperm with intact plasma membranes ranged from 27.8 + or - 2.1 to 49.6 + or - 1.9 and varied among lines and between age groups. Thawed sperm from 2 lines consistently demonstrated the highest and lowest motility parameters, whereas the velocity parameters of the remaining 6 lines varied widely. The mean number of hydrolysis points per square millimeter of inner perivitelline membrane ranged from 12.5 + or - 4.1 (line 2) to 103.3 + or - 30.2 (line 6). Age effects were observed for 4 out of 8 lines; however, improved postthaw sperm function at 12 mo of age was not consistent for all 3 assays. These results demonstrate variability among pedigreed lines in withstanding glycerol-based semen cryopreservation and provide a model for delineating genotypic and phenotypic factors affecting sperm cryosurvival.

NifH-Harboring Bacterial Community Composition across an Alaskan Permafrost Thaw Gradient

PubMed Central

Penton, C. Ryan; Yang, Caiyun; Wu, Liyou; Wang, Qiong; Zhang, Jin; Liu, Feifei; Qin, Yujia; Deng, Ye; Hemme, Christopher L.; Zheng, Tianling; Schuur, Edward A. G.; Tiedje, James; Zhou, Jizhong

2016-01-01

Since nitrogen (N) is often limiting in permafrost soils, we investigated the N2-fixing genetic potential and the inferred taxa harboring those genes by sequencing nifH gene fragments in samples taken along a permafrost thaw gradient in an Alaskan boreal soil. Samples from minimally, moderately and extensively thawed sites were taken to a depth of 79 cm to encompass zones above and below the depth of the water table. NifH reads were translated with frameshift correction and 112,476 sequences were clustered at 5% amino acid dissimilarity resulting in 1,631 OTUs. Sample depth in relation to water table depth was correlated to differences in the NifH sequence classes with those most closely related to group I nifH-harboring Alpha- and Beta-Proteobacteria in higher abundance above water table depth while those related to group III nifH-harboring Delta Proteobacteria more abundant below. The most dominant below water table depth NifH sequences, comprising 1/3 of the total, were distantly related to Verrucomicrobia-Opitutaceae. Overall, these results suggest that permafrost thaw alters the class-level composition of N2-fixing communities in the thawed soil layers and that this distinction corresponds to the depth of the water table. These nifH data were also compared to nifH sequences obtained from a study at an Alaskan taiga site, and to those of other geographically distant, non-permafrost sites. The two Alaska sites were differentiated largely by changes in relative abundances of the same OTUs, whereas the non-Alaska sites were differentiated by the lack of many Alaskan OTUs, and the presence of unique halophilic, sulfate- and iron-reducing taxa in the Alaska sites. PMID:27933054

NifH-Harboring Bacterial Community Composition across an Alaskan Permafrost Thaw Gradient

DOE PAGES

Penton, C. Ryan; Yang, Caiyun; Wu, Liyou; ...

2016-11-24

Since nitrogen (N) is often limiting in permafrost soils, we investigated the N 2-fixing genetic potential and the inferred taxa harboring those genes by sequencing nifH gene fragments in samples taken along a permafrost thaw gradient in an Alaskan boreal soil. Samples from minimally, moderately and extensively thawed sites were taken to a depth of 79 cm to encompass zones above and below the depth of the water table. NifH reads were translated with frameshift correction and 112,476 sequences were clustered at 5% amino acid dissimilarity resulting in 1,631 OTUs. Sample depth in relation to water table depth was correlatedmore » to differences in the NifH sequence classes with those most closely related to group I nifH-harboring Alpha- and Beta-Proteobacteria in higher abundance above water table depth while those related to group III nifH-harboring Delta Proteobacteria more abundant below. The most dominant below water table depth NifH sequences, comprising 1/3 of the total, were distantly related to Verrucomicrobia-Opitutaceae. Overall, these results suggest that permafrost thaw alters the class-level composition of N 2-fixing communities in the thawed soil layers and that this distinction corresponds to the depth of the water table. These nifH data were also compared to nifH sequences obtained from a study at an Alaskan taiga site, and to those of other geographically distant, non-permafrost sites. The two Alaska sites were differentiated largely by changes in relative abundances of the same OTUs, whereas the non-Alaska sites were differentiated by the lack of many Alaskan OTUs, and the presence of unique halophilic, sulfate- and iron-reducing taxa in the Alaska sites.« less

NifH-Harboring Bacterial Community Composition across an Alaskan Permafrost Thaw Gradient

DOE Office of Scientific and Technical Information (OSTI.GOV)

Penton, C. Ryan; Yang, Caiyun; Wu, Liyou

Since nitrogen (N) is often limiting in permafrost soils, we investigated the N 2-fixing genetic potential and the inferred taxa harboring those genes by sequencing nifH gene fragments in samples taken along a permafrost thaw gradient in an Alaskan boreal soil. Samples from minimally, moderately and extensively thawed sites were taken to a depth of 79 cm to encompass zones above and below the depth of the water table. NifH reads were translated with frameshift correction and 112,476 sequences were clustered at 5% amino acid dissimilarity resulting in 1,631 OTUs. Sample depth in relation to water table depth was correlatedmore » to differences in the NifH sequence classes with those most closely related to group I nifH-harboring Alpha- and Beta-Proteobacteria in higher abundance above water table depth while those related to group III nifH-harboring Delta Proteobacteria more abundant below. The most dominant below water table depth NifH sequences, comprising 1/3 of the total, were distantly related to Verrucomicrobia-Opitutaceae. Overall, these results suggest that permafrost thaw alters the class-level composition of N 2-fixing communities in the thawed soil layers and that this distinction corresponds to the depth of the water table. These nifH data were also compared to nifH sequences obtained from a study at an Alaskan taiga site, and to those of other geographically distant, non-permafrost sites. The two Alaska sites were differentiated largely by changes in relative abundances of the same OTUs, whereas the non-Alaska sites were differentiated by the lack of many Alaskan OTUs, and the presence of unique halophilic, sulfate- and iron-reducing taxa in the Alaska sites.« less

Modeling the effects of fire severity and climate warming on active layer and soil carbon dynamics of black spruce forests across the landscape in interior Alaska

USGS Publications Warehouse

Genet, H.; McGuire, Anthony David; Barrett, K.; Breen, A.; Euskirchen, E.S.; Johnstone, J.F.; Kasischke, E.S.; Melvin, A.M.; Bennett, A.; Mack, M.C.; Rupp, T.S.; Schuur, A.E.G.; Turetsky, M.R.; Yuan, F.

2013-01-01

There is a substantial amount of carbon stored in the permafrost soils of boreal forest ecosystems, where it is currently protected from decomposition. The surface organic horizons insulate the deeper soil from variations in atmospheric temperature. The removal of these insulating horizons through consumption by fire increases the vulnerability of permafrost to thaw, and the carbon stored in permafrost to decomposition. In this study we ask how warming and fire regime may influence spatial and temporal changes in active layer and carbon dynamics across a boreal forest landscape in interior Alaska. To address this question, we (1) developed and tested a predictive model of the effect of fire severity on soil organic horizons that depends on landscape-level conditions and (2) used this model to evaluate the long-term consequences of warming and changes in fire regime on active layer and soil carbon dynamics of black spruce forests across interior Alaska. The predictive model of fire severity, designed from the analysis of field observations, reproduces the effect of local topography (landform category, the slope angle and aspect and flow accumulation), weather conditions (drought index, soil moisture) and fire characteristics (day of year and size of the fire) on the reduction of the organic layer caused by fire. The integration of the fire severity model into an ecosystem process-based model allowed us to document the relative importance and interactions among local topography, fire regime and climate warming on active layer and soil carbon dynamics. Lowlands were more resistant to severe fires and climate warming, showing smaller increases in active layer thickness and soil carbon loss compared to drier flat uplands and slopes. In simulations that included the effects of both warming and fire at the regional scale, fire was primarily responsible for a reduction in organic layer thickness of 0.06 m on average by 2100 that led to an increase in active layer thickness of 1.1 m on average by 2100. The combination of warming and fire led to a simulated cumulative loss of 9.6 kgC m−2 on average by 2100. Our analysis suggests that ecosystem carbon storage in boreal forests in interior Alaska is particularly vulnerable, primarily due to the combustion of organic layer thickness in fire and the related increase in active layer thickness that exposes previously protected permafrost soil carbon to decomposition.

Orally administered Chrysin improves post-thawed sperm quality and fertility of rooster.

PubMed

Zhandi, M; Ansari, M; Roknabadi, P; Zare Shahneh, A; Sharafi, M

2017-12-01

Chrysin is a bioflavonoid compound found in passion flower, chamomile, propolis and honey at high levels. Post-thawed sperm quality and fertility of Chrysin-fed roosters were assessed in this study. Twenty 40-week-old male broiler breeders were randomly divided into four groups and fed basal diet supplemented with different levels of Chrysin including 0 (Ch-0), 25 (Ch-25), 50 (Ch-50) or 75 (Ch-75) mg/day for 12 consecutive weeks. Semen samples were weekly collected from 6th to 9th week of experiment to evaluate some sperm quality parameters including total and progressive motility, plasma membrane integrity and functionality (in fresh and post-thawed samples) and mitochondrial activity (only in post-thawed samples). Also, collected semen samples from 10th, 11th and 12th week of experiment were frozen and then artificially inseminated to test fertility rate. According to the results, an improvement in both fresh and post-thawed sperm quality including total [fresh: 88.00 ± 0.58 and 87.25 ± 0.67 (p < .01); post-thawed: 51.07 ± 2.05 and 52.72 ± 1.96 (p < .01)] and progressive motility [fresh: 76.00 ± 0.58 and 78.25 ± 0.65 (p < .01); post-thawed: 40.61 ± 2.01 and 39.88 ± 2.01 (p < .01)], plasma membrane integrity [fresh: 91.60 ± 0.58 and 89.85 ± 0.59 (p < .01); post-thawed: 56.99 ± 1.86 and 54.39 ± 1.86 (p < .01)] and functionality [fresh: 75.40 ± 0.42 and 77.90 ± 0.96 (p < .01); post-thawed: 45.69 ± 1.71 and 46.35 ± 1.71 (p < .01)] was noted for both Ch-50 and Ch-75, respectively, groups compared to control group. Despite no significant change in mitochondrial activity, fertility rate of post-thawed spermatozoa was significantly improved in all Chrysin-fed groups compared to Ch-0 group. In conclusion, oral Chrysin administration to roosters could ameliorate cryopreservation-induced impairment of sperm quality and fertility rate. © 2017 Blackwell Verlag GmbH.

Effects of permafrost thaw on nitrogen availability and plant nitrogen acquisition in Interior Alaska

NASA Astrophysics Data System (ADS)

Finger, R.; Euskirchen, E. S.; Turetsky, M.

2013-12-01

The degradation of ice-rich permafrost, which covers a large portion of Interior Alaska, typically leads to thermokarst and increases in soil saturation. As a result, conifer peat plateaus degrade and are often replaced by wet collapse scar bogs. This state change results in profound changes in regional hydrology, biogeochemical cycling, and plant community composition. Preliminary data suggest that permafrost thaw can increase surface soil inorganic nitrogen (IN) concentrations but it is still unknown whether these changes in nutrient availability are short-lived (pulse releases) and whether or not they impact collapse scar vegetation composition or productivity, particularly as collapse scars undergo succession with time-after-thaw. Therefore we are currently examining changes in plant community composition, N availability and plant N acquisition along three thermokarst gradients in Interior Alaska. Each gradient is comprised of a forested permafrost peat plateau, adjacent ecotones experiencing active permafrost degradation (including a collapsing forest canopy and a saturated moat), and a collapse scar bog where permafrost has completely degraded. We predicted that IN concentrations would be highest along the active thaw margin, and lowest in the peat plateau. We also predicted that IN concentrations would be positively related to shifts in vegetation community composition, nutrient use efficiency (NUE) and tissue 15N concentrations. Preliminary results have shown that IN concentrations increase in newer collapse scar features as well as with thaw depth. Our data also show a shift from feather moss and ericaceous shrub-dominate understories in the permafrost plateau to Sphagnum and sedge dominated thaw ecotone and bog communities. Further successional development of the collapse scar bog results in the reintroduction of small evergreen and deciduous shrubs as the peat mat develops. Over time, collapse scar succession and peat accumulation appears to lead to progressive N limitations, resulting in the dominance of plants with higher NUE. This likely has implications for plant litter quality, and could inhibit decomposition processes. We are collecting additional data to compare species-level NUE and nutrient resorption efficiency. We also will measure δ15N of aboveground plant organs, roots, soil, and pore water to explore sources of plant N, which we expect will influenced rooting depth as permafrost thaws as well as differences in mycorrhizal associations along our thaw gradient. Because thawing permafrost soils are anticipated to mobilize large amounts of N from soils, our results will improve our understanding of how permafrost thaw influences vegetation and soil N pools, soil N availability, and plant nutrition.

Histologic and ultrastructural evaluation of fresh and frozen-thawed human ovarian xenografts in nude mice.

PubMed

Nisolle, M; Casanas-Roux, F; Qu, J; Motta, P; Donnez, J

2000-07-01

To compare histologic and ultrastructural characteristics of fresh and frozen-thawed human ovarian cortical tissue grafted into nude mice. Experimental prospective study. An academic research environment. Ovarian biopsy specimens were obtained from 13 women undergoing laparoscopy for tubal ligation or infertility. Forty nude mice. A minilaparotomy was performed to place fresh and frozen-thawed ovarian grafts subcutaneously (sc) or intraperitoneally (ip). Removal of the ovarian grafts was performed at 24 days. [1] the follicular population, [2] fibrosis, [3] vascularization of the grafted tissue, and [4] ultrastructural evaluation. A greater fibrosis relative surface area was noted in frozen-thawed transplanted tissue than in fresh transplants. Regardless of this fibrosis, a similar follicular density was observed in fresh and frozen-thawed ovarian tissue 24 days after transplantation. Active angiogenesis was proved by both immunohistochemical study of the vascular endothelial growth factor and morphometric study of the vascular network. Normal ultrastructural characteristics were noted in frozen-thawed ovarian biopsies. Angiogenesis allows implantation of the graft even if it has been cryopreserved and thawed similarly to implantation of fresh tissue. The greater fibrosis observed in grafts after cryopreservation and implantation does not seem to affect the primordial and primary ovocyte population and their ultrastructural characteristics, but further studies must be conducted to prove that after cryopreservation and transplantation, ovocytes may achieve full maturation and fertilization.

Evaluation of reactive oxygen metabolites in frozen serum samples. Effect of storage and repeated thawing.

PubMed

Cavalleri, A; Colombo, C; Venturelli, E; Miceli, R; Mariani, L; Cornelli, U; Pala, V; Berrino, F; Secreto, G

2004-01-01

Measuring the free radical activity in serum samples from prospective studies is the best way to investigate the association between oxidative stress and human diseases. Prospective studies require the analysis of serum samples that have often been stored for a long time. Our study was designed to determine the effect of storage at -30 degrees C and -80 degrees C for two years on free radical activity. We analyzed the free radical activity by measuring circulating hydroperoxides in a pool of sera at baseline and after one day, one week, one month and 25 months of storage, using a photometric method (d-ROMs test). Measurements were performed in aliquots thawed only once at each time point and in aliquots frozen and thawed repeatedly over the study period. After two years we observed a small but statistically significant 4% decrease in the hydroperoxide concentration, which was substantially unaffected by storage temperatures and repeated freeze-thaw cycles. We also carried out the d-ROMs test in sera from ten apparently healthy volunteers at 2, 8, 24, and 48 hours after collection and storage at 4 degrees C and did not observe any significant variation. In conclusion, the d-ROMs test is a simple method suitable to evaluate the free radical activity in frozen serum samples after long-term storage.

Comparison of protocols for cryopreservation of rhesus monkey spermatozoa by post-thaw motility recovery and hyperactivation.

PubMed

Nichols, S M; Bavister, B D

2006-01-01

Cryopreservation of spermatozoa is useful for gene banking and for in vitro fertilisation (IVF). This study compared several published cryopreservation techniques to find the most efficient for rhesus macaques. Effectiveness was assessed by sperm longevity (post-thaw motility % and duration) and ability to hyperactivate in response to chemical activators (caffeine, dibutyryl cyclic AMP). Each ejaculate from three males was treated with four published cryopreservation protocols (Seier et al. 1993; Sanchez-Partida et al. 2000; Si et al. 2000; Isachenko et al. 2005). Upon thawing, each sub-sample was incubated either at 37 degrees C in 5% CO2 in air with or without activators or at approximately 22 degrees C in atmospheric air without activators for 0-24 h. Samples cryopreserved using one method showed zero motility and were not included in the 2 ;2 G-test statistical analysis. The other methods all demonstrated good immediate post-thaw motility rates (68%, 73% and 62% respectively) and underwent capacitation after exposure to activators. Sperm motility in each treatment decreased over time at both temperatures but overall, incubation at 22 degrees C preserved motility better in all three methods. In summary, cryopreservation of rhesus spermatozoa using the method published by Sanchez-Partida et al. or Seier et al. appeared best, potentially supporting gene banking as well as allowing for multiple IVF uses from the same sample.

Effect of lecithin nanoliposome or soybean lecithin supplemented by pomegranate extract on post-thaw flow cytometric, microscopic and oxidative parameters in ram semen.

PubMed

Mehdipour, Mahdieh; Daghigh Kia, Hossein; Nazari, Maryam; Najafi, Abouzar

2017-10-01

This investigation was carried out to study the effect of soybean lecithin 1.5% (wt/vol) (0, 2.5, 5 and 7.5 mg l -1 pomegranate extract (PE)) or PE-loaded lecithin nanoliposome (0, 2.5, 5 and 7.5 mg l -1 ) to Tris-based extender. Sperm motility (CASA), viability, membrane integrity (HOS test), abnormalities, mitochondrial activity, apoptosis status, lipid peroxidation, total antioxidant capacity (TAC)) and antioxidant activities (GPX, SOD) were investigated following freeze-thawing. No significant differences were detected in motility parameters, viability, membrane integrity, and mitochondria activity after thawing sperm between soybean lecithin and lecithin nanoliposomes. It was shown that PE5 significantly improved sperm total and progressive motility, membrane integrity, viability, mitochondria activity, TAC and reduced lipid peroxidation (malondialdehyde concentration). Moreover, the percentage of apoptotic sperm in PE5 extenders was significantly the lowest among other treatments. Sperm abnormalities, SOD and GPX were not affected by the antioxidant supplements. For apoptotic status, no differences were observed between soybean lecithin and lecithin nanoliposome. We showed that lecithin nanoliposome extender can be a beneficial alternative extender to protect ram sperm during cryopreservation without any adverse effects. It was also observed that regarding pomegranate concentration, PE5 can improve the quality of ram semen after thawing. Copyright © 2017 Elsevier Inc. All rights reserved.

Temperature sensitivity of methanogenesis in a thermokarst lake sediment core

NASA Astrophysics Data System (ADS)

Heslop, J. K.; Walter Anthony, K. M.; Grosse, G.; Anthony, P.; Bondurant, A.

2016-12-01

Little is known about temperature sensitivity of permafrost organic carbon (OC) mineralization over time scales of years to centuries following thaw. Due to their formation and thaw histories, taliks (thaw bulbs) beneath thermokarst lakes provide a unique natural laboratory from which to examine how permafrost thawed in saturated anaerobic conditions responds to changes in temperature following long periods of time since thaw. We anaerobically incubated samples from a 590 cm thermokarst lake sediment core near Fairbanks, Alaska at four temperatures (0, 3, 10, and 25 ºC) bracketing observed talik temperatures. We show that since initial thaw 400 yr BP CH4 production shifts from being most sensitive to at lower (0-3 ºC; Q10-EC=1.15E7) temperatures to being most sensitive at higher (10-25 ºC; Q10-EC=67) temperatures. Frozen sediments collected from beneath the talik, thawed at the commencement of the incubation, had significant (p ≤ 0.05) increases in CH4 production rates at lower temperatures but did not show significant CH4 production rate increases at higher temperatures (10-25 ºC). We hypothesize the thawing of sediments removed a major barrier to C mineralization, leading to rapid initial permafrost C mineralization and preferential mineralization of the most biolabile OC compounds. In contrast, sediments which had been thawed beneath the lake for longer periods of time did not experience statistically significant increases in CH4 production at lower temperatures (0-10 ºC), but had high temperature sensitivities at higher temperatures (10-25 ºC). We believe these rate increases are due to warmer temperatures in the experimental incubations crossing activation energy thresholds, allowing previously recalcitrant fractions of OC to be utilized, and/or the presence of different microbial communities adapted to thawed sediments. Recently-deposited sediments at shallow depths in the lake core experienced increases in CH4 production across all incubation temperatures (Q10-ST=4.4).

Effects of storage in different semen extenders on the pre-freezing and post-thawing quality of boar spermatozoa.

PubMed

Dziekońska, A; Zasiadczyk, Ł; Lecewicz, M; Strzeżek, R; Koziorowska-Gilun, M; Fraser, L; Mogielnicka-Brzozowska, M; Kordan, W

2015-01-01

The aim of this study was to investigate the effects of storage of semen in different commercial extenders on the pre-freezing and post-thawing quality of boar spermatozoa. Semen was diluted in BTS, Androhep (AH) and Gedil (GD), stored for 24 h at 17°C, and then frozen in accordance with the cryopreservation protocol. Analyses of the quality of spermatozoa included: motility, normal apical ridge (NAR) acrosome, plasma membrane integrity (PMI), mitochondrial membrane potential (MMP), measurements of ATP content and activity of superoxidase dismutase (SOD) and glutathione peroxidase (GPx). Prior to the freezing process, no significant effect of the extender on the sperm quality parameters was noted. After thawing the spermatozoa it was demonstrated that the type of extender used influenced PMI, MMP, ATP content and activity of GPx. In the AH extender the percentage of spermatozoa with PMI and ATP content in spermatozoa was significantly higher (P<0.05) as compared to the BTS or GD extenders. In addition, semen stored in the AH was characterised by a statistically higher (P<0.05) percentage of spermatozoa with MMP and increased activity of GPx as compared with the BTS. The results obtained indicate that for the cryopreservation process, boar spermatozoa stored for 24 hours in liquid state can be used. However, the type of extender used prior to freezing may have a significant effect on the post-thawing quality of the spermatozoa. The AH extender better secured the quality of thawed boar spermatozoa as compared with the BTS or GD.

Dendritic cells induce specific cytotoxic T lymphocytes against prostate cancer TRAMP-C2 cells loaded with freeze- thaw antigen and PEP-3 peptide.

PubMed

Liu, Xiao-Qi; Jiang, Rong; Li, Si-Qi; Wang, Jing; Yi, Fa-Ping

2015-01-01

Prostate cancer is the most common cancer in men. In this study, we investigated immune responses of cytotoxic T lymphocytes (CTLs) against TRAMP-C2 prostate cancer cells after activation by dendritic cells (DCs) loaded with TRAMP-C2 freeze-thaw antigen and/or PEP-3 peptide in vitro. Bone marrow-derived DC from the bone marrow of the C57BL/6 were induced to mature by using the cytokine of rhGM-CSF and rhIL-4, and loaded with either the freeze-thaw antigen or PEP-3 peptide or both of them. Maturation of DCs was detected by flow cytometry. The killing efficiency of the CTLs on TRAMP-C2 cells were detected by flow cytometry, CCK8, colony formation, transwell migration, and wound-healing assay. The levels of the IFN-γ, TNF-β and IL-12 were measured by enzyme-linked immunosorbent assay (ELISA). Compared with the unloaded DCs, the loaded DCs had significantly increased expression of several phenotypes related to DC maturation. CTLs activated by DCs loaded with freeze-thaw antigen and PEP-3 peptide had more evident cytotoxicity against TRAMP-C2 cells in vitro. The secretion levels of IFN-γ, TNF-β and IL-12, secreted by DCs loaded with antigen and PEP-3 and interaction with T cells, were higher than in the other groups. Our results suggest that the CTLs activated by DCs loaded with TRAMP-C2 freeze-thaw antigen and PEP-3 peptide exert a remarkable killing efficiency against TRAMP-C2 cells in vitro.

A pan-Arctic synthesis of CH4 and CO2 production from anoxic soil incubations

USGS Publications Warehouse

Treat, C.C.; Natali, Susan M.; Ernakovich, Jessica; Iverson, Colleen M.; Lupasco, Massimo; McGuire, A. David; Norby, Richard J.; Roy Chowdhury, Taniya; Richter, Andreas; Šantrůčková, Hana; Schädel, C.; Schuur, Edward A.G.; Sloan, Victoria L.; Turetsky, Merritt R.; Waldrop, Mark P.

2015-01-01

Permafrost thaw can alter the soil environment through changes in soil moisture, frequently resulting in soil saturation, a shift to anaerobic decomposition, and changes in the plant community. These changes, along with thawing of previously frozen organic material, can alter the form and magnitude of greenhouse gas production from permafrost ecosystems. We synthesized existing methane (CH4) and carbon dioxide (CO2) production measurements from anaerobic incubations of boreal and tundra soils from the geographic permafrost region to evaluate large-scale controls of anaerobic CO2 and CH4 production and compare the relative importance of landscape-level factors (e.g., vegetation type and landscape position), soil properties (e.g., pH, depth, and soil type), and soil environmental conditions (e.g., temperature and relative water table position). We found fivefold higher maximum CH4 production per gram soil carbon from organic soils than mineral soils. Maximum CH4 production from soils in the active layer (ground that thaws and refreezes annually) was nearly four times that of permafrost per gram soil carbon, and CH4 production per gram soil carbon was two times greater from sites without permafrost than sites with permafrost. Maximum CH4 and median anaerobic CO2 production decreased with depth, while CO2:CH4 production increased with depth. Maximum CH4 production was highest in soils with herbaceous vegetation and soils that were either consistently or periodically inundated. This synthesis identifies the need to consider biome, landscape position, and vascular/moss vegetation types when modeling CH4 production in permafrost ecosystems and suggests the need for longer-term anaerobic incubations to fully capture CH4 dynamics. Our results demonstrate that as climate warms in arctic and boreal regions, rates of anaerobic CO2 and CH4 production will increase, not only as a result of increased temperature, but also from shifts in vegetation and increased ground saturation that will accompany permafrost thaw.

Assimilation of old carbon by stream food webs in arctic Alaska

NASA Astrophysics Data System (ADS)

O'Donnell, J. A.; Carey, M.; Xu, X.; Koch, J. C.; Walker, J. C.; Zimmerman, C. E.

2017-12-01

Permafrost thaw in arctic and sub-arctic region is mobilizing old carbon (C) from perennially frozen soils, driving the release of old C to the atmosphere and to aquatic ecosystems. Much research has focused on the transport and lability of old dissolved organic C (DOC) as a possible feedback to the climate system following thaw. However, little is known about the role of old C as a source to aquatic food webs in watersheds underlain by thawing permafrost. To quantify the contributions of old C to Arctic stream food-webs, we measured the radiocarbon (Δ14C) and stable isotope (δ13C, δ15N) contents of periphyton, macroinvertebrates, and resident fish species (Arctic Grayling (Thymallus arcticus) and Dolly Varden (Salvelinus malma)). We also characterized the isotopic composition of possible C sources, including DOC, dissolved inorganic carbon (DIC), and soil organic matter. Samples were collected across 10 streams in Arctic Alaska, draining watersheds underlain by varying parent material and ground-ice content, from ice-poor bedrock to ice-rich loess (i.e. Yedoma). Fraction modern (FM) values for Arctic Grayling and Dolly Varden ranged from 0.6720 to 1.0101 (3195 years BP to modern) across all streams, and closely tracked spatial variation in Δ14C content of periphyton. Parent material and ground-ice content appear to govern the age and form of dissolved C sources to stream biota. For instance, in watersheds underlain by ice-poor bedrock, old DIC (< 5000 years BP) was the dominant C source to stream biota, reflecting contributions from carbonate weathering and soil respiration. In streams draining ice-rich Yedoma, high concentrations of younger DOC were the primary C source to stream biota, reflecting leaching of DOC from saturated, peaty soils of the active layer. These findings highlight the importance of permafrost characteristics as a control on subsurface hydrology and the delivery of aged C to surface waters. Given the large stores Pleistocene-aged organic C in Yedoma deposits, we hypothesize that older C may become a more important contribution to stream biota under warmer conditions that promote thaw.

Greenhouse Gas Exchange in Small Arctic Thaw Ponds

NASA Astrophysics Data System (ADS)

Laurion, I.; Bégin, P. N.; Bouchard, F.; Preskienis, V.

2014-12-01

Arctic lakes and ponds can represent up to one quarter of the land surface in permafrost landscapes, particularly in lowland tundra landscapes characterized by ice wedge organic polygons. Thaw ponds can be defined as the aquatic ecosystems associated to thawing of organic soils, either resulting from active layer processes and located above low-center peat polygons (hereafter low-center polygonal or LCP ponds), or resulting from thermokarst slumping above melting ice wedges linked to the accelerated degradation of permafrost (hereafter ice-wedge trough or IWT ponds). These ponds can merge together forming larger water bodies, but with relatively stable shores (hereafter merged polygonal or MPG ponds), and with limnological characteristics similar to LCP ponds. These aquatic systems are very small and shallow, and present a different physical structure than the larger thermokarst lakes, generated after years of development and land subsidence. In a glacier valley on Bylot Island, Nunavut, Canada, thermokarst and kettle lakes together represent 29% of the aquatic area, with a thermal profile resembling those of more standard arctic lakes (mixed epilimnion). The IWT ponds (44% of the area) are stratified for a large fraction of the summer despite their shallowness, while LCP and MPG ponds (27% of the area) show a more homogeneous water column. This will affect gas exchange in these diverse aquatic systems, in addition to their unique microbiota and organic carbon lability that control the production and consumption rates of greenhouse gases. The stratification in IWT ponds generates hypoxic conditions at the bottom, and together with the larger availability of organic carbon, stimulates methanogenesis and limits the mitigating action of methanotrophs. Overall, thaw ponds are largely supersaturated in methane, with IWT ponds dominating the emissions in this landscape (92% of total aquatic emissions estimated for the same valley), and they present large variations in emission rates. Conventional wind-based models seem inappropriate to simulate GHG exchanges, as seen when comparing with floating chamber estimations. Surface renewal models that consider heat exchanges are used to estimate flux more accurately, and ebullition flux are measured with submerged funnels to compare with diffusive flux estimations.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Genet, Helene; McGuire, A. David; Barrett, K.

There is a substantial amount of carbon stored in the permafrost soils of boreal forest ecosystems, where it is currently protected from decomposition. The surface organic horizons insulate the deeper soil from variations in atmospheric temperature. The removal of these insulating horizons through consumption by fire increases the vulnerability of permafrost to thaw, and the carbon stored in permafrost to decomposition. In this study we ask how warming and fire regime may influence spatial and temporal changes in active layer and carbon dynamics across a boreal forest landscape in interior Alaska. To address this question, we (1) developed and testedmore » a predictive model of the effect of fire severity on soil organic horizons that depends on landscape-level conditions and (2) used this model to evaluate the long-term consequences of warming and changes in fire regime on active layer and soil carbon dynamics of black spruce forests across interior Alaska. The predictive model of fire severity, designed from the analysis of field observations, reproduces the effect of local topography (landform category, the slope angle and aspect and flow accumulation), weather conditions (drought index, soil moisture) and fire characteristics (day of year and size of the fire) on the reduction of the organic layercaused by fire. The integration of the fire severity model into an ecosystem process-based model allowed us to document the relative importance and interactions among local topography, fire regime and climate warming on active layer and soil carbon dynamics. Lowlands were more resistant to severe fires and climate warming, showing smaller increases in active layer thickness and soil carbon loss compared to drier flat uplands and slopes. In simulations that included the effects of both warming and fire at the regional scale, fire was primarily responsible for a reduction in organic layer thickness of 0.06 m on average by 2100 that led to an increase in active layer thickness of 1.1 m on average by 2100. The combination of warming and fire led to a simulated cumulative loss of 9.6 kgC m 2 on average by 2100. Our analysis suggests that ecosystem carbon storage in boreal forests in interior Alaska is particularly vulnerable, primarily due to the combustion of organic layer thickness in fire and the related increase in active layer thickness that exposes previously protected permafrost soil carbon to decomposition.« less

Seasonal and multi-year surface displacements measured by DInSAR in a High Arctic permafrost environment

NASA Astrophysics Data System (ADS)

Rudy, Ashley C. A.; Lamoureux, Scott F.; Treitz, Paul; Short, Naomi; Brisco, Brian

2018-02-01

Arctic landscapes undergo seasonal and long-term changes as the active layer thaws and freezes, which can result in localized or irregular subsidence leading to the formation of thermokarst terrain. Differential Interferometric Synthetic Aperture Radar (DInSAR) is a technique capable of measuring ground surface displacements resulting from thawing permafrost at centimetre precision and is quickly gaining acceptance as a means of measuring ground displacement in permafrost regions. Using RADARSAT-2 stacked DInSAR data from 2013 and 2015 we determined the magnitude and patterns of land surface change in a continuous permafrost environment. At our study site situated in the Canadian High Arctic, DInSAR seasonal ground displacement patterns were consistent with field observations of permafrost degradation. As expected, many DInSAR values are close to the detection threshold (i.e., 1 cm) and therefore do not indicate significant change; however, DInSAR seasonal ground displacement patterns aligned well with climatological and soil conditions and offer geomorphological insight into subsurface processes in permafrost environments. While our dataset is limited to two years of data representing a three-year time period, the displacements derived from DInSAR provide insight into permafrost change in a High Arctic environment and demonstrate that DInSAR is an applicable tool for understanding environmental change in remote permafrost regions.

Patterns of nitrogen export from a seasonal freezing agricultural watershed during the thawing period.

PubMed

Zhao, Qiang; Chang, Dan; Wang, Kang; Huang, Jiesheng

2017-12-01

The objectives of this study were to investigate water, ammonium nitrogen (NH 4 + -N), and nitrate nitrogen (NO 3 - -N) export processes during the thawing period in a watershed with heavy agricultural activities and to evaluate contributions of N (i.e., NO 3 - -N and NH 4 + -N) from different source areas under different climate conditions. Experiments were conducted within the 75km 2 agricultural Heidingzi watershed in northeast China. The thawing period was divided into four stages: early-melt, late-melt, rain-on-melt, and post-melt. Drainage regions (DRs) were separated into three types. The processes of water and N discharge from soil into rivers were monitored in these DRs during the thawing periods of 2014, 2015, and 2016. Results show that the processes of water and N discharge were not synchronous during the thawing period. Variations in discharge concentrations of NH 4 + -N and NO 3 - -N during the thawing period were mainly affected by the flushing effect, which was controlled by the physical state of the surface water (snow or ice) and the melt rate of frozen soil. Contributions of N export from the DRs varied under different land uses and climate conditions during the thawing period. NO 3 - -N export was mainly from maize fields. Thawing stages with high NO 3 - -N export were always accompanied by higher discharge rates. NH 4 + -N export mainly occurred during the early-melt and late-melt stages and from riverside rural regions. Copyright © 2017 Elsevier B.V. All rights reserved.

Effects of arginine and trehalose on post-thawed bovine sperm quality.

PubMed

Öztürk, Caner; Güngör, Şükrü; Ataman, Mehmet Bozkurt; Bucak, Mustafa Numan; Başpinar, Nuri; Ili, Pınar; Inanç, Muhammed Enes

2017-09-01

The present study was conducted to examine the protective role of arginine and trehalose on post-thaw bull sperm and oxidative stress parameters. Five ejaculates for each bull were used in the study. Each ejaculate, split into three equal aliquots and diluted at 37 °C with base extenders containing 2 mM arginine, 25 mM trehalose and no antioxidant (control) was cooled to 5 °C and then frozen. Frozen straws were thawed in a water bath for evaluation. Supplementation of the semen extender with arginine decreased the percentages of post-thawed subjective motility (29 ± 8.21%), CASA motility (12.2 ± 5.69%) and progressive motility (3.52 ± 2.13%), compared with the controls (43 ± 2.73%, 55.4 ± 6.78% and 33.48 ± 4.14%, respectively, P < 0.05). Supplementation of the semen extender with trehalose produced a higher mitochondrial activity and sperm viability (36.3 ± 3.99% and 44.1 ± 2.18%) compared with the control (13 ± 8.15 and 31.7 ± 3.94%, respectively, P < 0.05). It was established that trehalose (95.1%) and arginine (92.8%) protect DNA integrity compared to the control (90.4%) (P < 0.05). Trehalose supplementation in semen extenders provided great benefit in terms of viability, mitochondrial activity, and intact sperm DNA on frozen-thawed bull sperm.

High Resolution Freeze and Thaw States Detection Using Combination of Sentinel 1A SAR and Passive Microwave Measurements

NASA Astrophysics Data System (ADS)

Azarderakhsh, M.; McDonald, K. C.; Norouzi, H.; Rebolledo, M. A.; Prakash, S.

2017-12-01

The freeze and thaw (FT) cycles in high-latitude regions have great impact on many biogeochemical transitions, hydrology and ecosystem especially in wetland areas. Passive and active microwave remote sensing data from satellite observations have been deployed in the past to define the status of the surface in terms of freeze and thaw. While many progresses have been made in this field, the limitations attached to such observations have hindered our ability to fully predict the change of surface state in the scale that is appropriate for the aforementioned applications. The transition between freeze and thaw states may occur frequently (even within a day) especially during shifts from cold to warm seasons and vice versa. Passive microwave sensors have different acquisition times, and data fusion of these sensors may provide a complete diurnal variation estimate of FT states. However, the coarse spatial resolution of these measurements may undermine their applicability. However, active microwave backscatter measurements from sensors such as Sentinel 1A and the Advanced Land Observing Satellite Phased Array L-Band SAR (ALOS PALSAR) can deliver high resolution information about wetlands and FT status. In this project, Synthetic Aperture Radar (SAR) c-band backscatter data from Sentinel 1 from April 2014 to June 2017 are deployed to detect high resolution freeze/thaw states and wetland areas. The contrasts between frozen and thawed seasons are used to define FT states after performing required radiometric corrections and calibrations. A method based on phase changes in polarized images is developed for different land cover types to maximize the accuracy of the detections. The aggregated (up-scaled) estimates from active measurements are compared to passive microwave-based FT product. The results of this method reveal that the estimates are relatively in good agreement with SNOw TELemetry (SNOTEL) ground measurements. Finally, a downscaling method is tried to link passive emissivity-based FT product to high resolution active FT estimates to increase the temporal frequency of the high-resolution Sentinel data. The results of this study contribute to better understanding sources of positive carbon and methane (CH4) feedback to the atmosphere.

Controls on ecosystem and root respiration across a permafrost and wetland gradient in interior Alaska

USGS Publications Warehouse

McConnell, Nicole A.; Turetsky, Merritt R.; McGuire, A. David; Kane, Evan S.; Waldrop, Mark P.; Harden, Jennifer W.

2013-01-01

Permafrost is common to many northern wetlands given the insulation of thick organic soil layers, although soil saturation in wetlands can lead to warmer soils and increased thaw depth. We analyzed five years of soil CO2 fluxes along a wetland gradient that varied in permafrost and soil moisture conditions. We predicted that communities with permafrost would have reduced ecosystem respiration (ER) but greater temperature sensitivity than communities without permafrost. These predictions were partially supported. The colder communities underlain by shallow permafrost had lower ecosystem respiration (ER) than communities with greater active layer thickness. However, the apparent Q10 of monthly averaged ER was similar in most of the vegetation communities except the rich fen, which had smaller Q10 values. Across the gradient there was a negative relationship between water table position and apparent Q10, showing that ER was more temperature sensitive under drier soil conditions. We explored whether root respiration could account for differences in ER between two adjacent communities (sedge marsh and rich fen), which corresponded to the highest and lowest ER, respectively. Despite differences in root respiration rates, roots contributed equally (~40%) to ER in both communities. Also, despite similar plant biomass, ER in the rich fen was positively related to root biomass, while ER in the sedge marsh appeared to be related more to vascular green area. Our results suggest that ER across this wetland gradient was temperature-limited, until conditions became so wet that respiration became oxygen-limited and influenced less by temperature. But even in sites with similar hydrology and thaw depth, ER varied significantly likely based on factors such as soil redox status and vegetation composition.

Coincident Above- and Below-ground Autonomous Monitoring to Quantify Co-variability in Permafrost, Soil and Vegetation Properties in Arctic Tundra: Supporting Data

DOE Data Explorer

Baptiste Dafflon; Rusen Oktem; John Peterson; Craig Ulrich; Anh Phuong Tran; Vladimir Romanovsky; Susan Hubbard

2017-05-10

The dataset contains measurements obtained through electrical resistivity tomography (ERT) to monitor soil properties, pole-mounted optical cameras to monitor vegetation dynamics, point probes to measure soil temperature, and periodic manual measurements of thaw layer thickness, snow thickness and soil dielectric permittivity.

Rooster Semen Cryopreservation: Effect of Pedigree Line and Male Age on Post-Thaw Sperm Function

USDA-ARS?s Scientific Manuscript database

The fertility rates of cryopreserved poultry semen are highly variable and not reliable for use in preservation of commercial genetic stocks. Our objective was to evaluate the cryosurvival of semen from 8 pedigreed layer lines at the onset and end of production. Semen from 160 roosters (20/line) was...

In vitro evaluation of encapsulated primary rat hepatocytes pre- and post-cryopreservation at -80°C and in liquid nitrogen.

PubMed

Durkut, Serap; Elçin, A Eser; Elçin, Y Murat

2015-02-01

Encapsulation techniques have the potential to protect hepatocytes from cryoinjury. In this study, we comparatively evaluated the viability and metabolic function of primary rat hepatocytes encapsulated in calcium alginate microbeads, in chitosan tripolyphosphate beads, and in three-layered alginate-chitosan-alginate (ACA) microcapsules, before and after cryopreservation at -80°C and in liquid nitrogen (LN2) for 1 and 3 months. Findings demonstrated that LN2 was atop of -80°C in regard to preservation of viability (> 90%) and hepatic functions. LN2-cryopreserved hepatocytes encapsulated in ACA microcapsules retained metabolic function post-thawing, with > 90% of the albumin, total protein and urea syntheses activities, and > 80% of oxidative function.

Supplementation of soybean lecithin-based semen extender by antioxidants: complementary flowcytometric study on post-thawed ram spermatozoa.

PubMed

Sharafi, Mohsen; Zhandi, Mahdi; Akbari Sharif, Abbas

2015-06-01

The purpose of the current study was to evaluate the effects of cysteine (C) and glutathione (G) on the post-thawed ram sperm quality. Collected semen samples from four mature rams were diluted with five soybean lecithin (SL)-based extenders containing: no antioxidant (SL-0), 5 mM cysteine (SL-C5), 10 mM cysteine (SL-C10), 5 mM glutathione (SL-G5) and 10 mM glutathione (SL-G10). After freeze-thawing process, motion and velocity parameters, plasma membrane integrity and functionality, morphological abnormality, lipid peroxidation, acrosomal status, mitochondria activity, and apoptosis status of post-thawed ram spermatozoa were assessed. The results showed that SL-C10 increased the total motility and plasma membrane integrity (p < 0.05) of post-thawed ram spermatozoa (55.86 ± 1.37 and 60.57 ± 1.34 %) compared to other extenders. Progressive motility was significantly higher in SL-C10 (24.71 ± 1.13 %) compared to SL-0 (20 ± 1.13 %) and SL-G10 (15 ± 1.13 %). Mitochondrial activity was significantly higher in SL-C10 (56.83 ± 2.29 %) compared to SL-G10 (38.75 ± 2.29 %). Capacitation and acrosomal status, lipid peroxidation, and the percentage of dead spermatozoa were not affected by different extenders. The percentage of live spermatozoa was higher in SL-C10 (56.33 ± 1.35 %) compared to other extenders. Also, SL-C10 resulted in a lower percentage of apoptotic spermatozoa (14.17 ± 0.53 %) compared to other extenders. The results of this study showed that supplementation of SL-based ram semen extender with 10 mM cysteine resulted in an improved quality of post-thawed ram spermatozoa.

Seismic Monitoring of Permafrost During Controlled Thaw: An Active-Source Experiment Using a Surface Orbital Vibrator and Fiber-Optic DAS Arrays

NASA Astrophysics Data System (ADS)

Dou, S.; Wood, T.; Lindsey, N.; Ajo Franklin, J. B.; Freifeld, B. M.; Gelvin, A.; Morales, A.; Saari, S.; Ekblaw, I.; Wagner, A. M.; Daley, T. M.; Robertson, M.; Martin, E. R.; Ulrich, C.; Bjella, K.

2016-12-01

Thawing of permafrost can cause ground deformations that threaten the integrity of civil infrastructure. It is essential to develop early warning systems that can identify critically warmed permafrost and issue warnings for hazard prevention and control. Seismic methods can play a pivotal role in such systems for at least two reasons: First, seismic velocities are indicative of mechanical strength of the subsurface and thus are directly relevant to engineering properties; Second, seismic velocities in permafrost systems are sensitive to pre-thaw warming, which makes it possible to issue early warnings before the occurrence of hazardous subsidence events. However, several questions remain: What are the seismic signatures that can be effectively used for early warning of permafrost thaw? Can seismic methods provide enough warning times for hazard prevention and control? In this study, we investigate the feasibility of using permanently installed seismic networks for early warnings of permafrost thaw. We conducted continuous active-source seismic monitoring of permafrost that was under controlled heating at CRREL's Fairbanks permafrost experiment station. We used a permanently installed surface orbital vibrator (SOV) as source and surface-trenched DAS arrays as receivers. The SOV is characterized by its excellent repeatability, automated operation, high energy level, and the rich frequency content (10-100 Hz) of the generated wavefields. The fiber-optic DAS arrays allow continuous recording of seismic data with dense spatial sampling (1-meter channel spacing), low cost, and low maintenance. This combination of SOV-DAS provides unique seismic datasets for observing time-lapse changes of warming permafrost at the field scale, hence providing an observational basis for design and development of early warning systems for permafrost thaw.

Active Layer Soil Carbon and Nutrient Mineralization, Barrow, Alaska, 2012

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stan D. Wullschleger; Holly M. Vander Stel; Colleen Iversen

This data set consists of bulk soil characteristics as well as carbon and nutrient mineralization rates of active layer soils manually collected from the field in August, 2012, frozen, and then thawed and incubated across a range of temperatures in the laboratory for 28 day periods in 2013-2015. The soils were collected from four replicate polygons in each of the four Areas (A, B, C, and D) of Intensive Site 1 at the Next-Generation Ecosystem Experiments (NGEE) Arctic site near Barrow, Alaska. Soil samples were coincident with the established Vegetation Plots that are located in center, edge, and trough microtopographymore » in each polygon. Data included are 1) bulk soil characteristics including carbon, nitrogen, gravimetric water content, bulk density, and pH in 5-cm depth increments and also by soil horizon, 2) carbon, nitrogen, and phosphorus mineralization rates for soil horizons incubated aerobically (and in one case both aerobically and anaerobically) for 28 days at temperatures that included 2, 4, 8, and 12 degrees C. Additional soil and incubation data are forthcoming. They will be available when published as part of another paper that includes additional replicate analyses.« less

Temperature sensitivity of gaseous elemental mercury in the active layer of the Qinghai-Tibet Plateau permafrost.

PubMed

Ci, Zhijia; Peng, Fei; Xue, Xian; Zhang, Xiaoshan

2018-07-01

Soils represent the single largest mercury (Hg) reservoir in the global environment, indicating that a tiny change of Hg behavior in soil ecosystem could greatly affect the global Hg cycle. Climate warming is strongly altering the structure and functions of permafrost and then would influence the Hg cycle in permafrost soils. However, Hg biogeochemistry in climate-sensitive permafrost is poorly investigated. Here we report a data set of soil Hg (0) concentrations in four different depths of the active layer in the Qinghai-Tibet Plateau permafrost. We find that soil Hg (0) concentrations exhibited a strongly positive and exponential relationship with temperature and showed different temperature sensitivity under the frozen and unfrozen condition. We conservatively estimate that temperature increases following latest temperature scenarios of the IPCC could result in up to a 54.9% increase in Hg (0) concentrations in surface permafrost soils by 2100. Combining the simultaneous measurement of air-soil Hg (0) exchange, we find that enhanced Hg (0) concentrations in upper soils could favor Hg (0) emissions from surface soil. Our findings indicate that Hg (0) emission could be stimulated by permafrost thawing in a warmer world. Copyright © 2018 Elsevier Ltd. All rights reserved.

Shallow groundwater systems in a polar desert, McMurdo Dry Valleys, Antarctica

NASA Astrophysics Data System (ADS)

Gooseff, Michael N.; Barrett, John E.; Levy, Joseph S.

2013-02-01

The McMurdo Dry Valleys (MDVs), Antarctica, exist in a hyperarid polar desert, underlain by deep permafrost. With an annual mean air temperature of -18 °C, the MDVs receive <10 cm snow-water equivalent each year, collecting in leeward patches across the landscape. The landscape is dominated by expansive ice-free areas of exposed soils, mountain glaciers, permanently ice-covered lakes, and stream channels. An active layer of seasonally thawed soil and sediment extends to less than 1 m from the surface. Despite the cold and low precipitation, liquid water is generated on glaciers and in snow patches during the austral summer, infiltrating the active layer. Across the MDVs, groundwater is generally confined to shallow depths and often in unsaturated conditions. The current understanding and the biogeochemical/ecological significance of four types of shallow groundwater features in the MDVs are reviewed: local soil-moisture patches that result from snow-patch melt, water tracks, wetted margins of streams and lakes, and hyporheic zones of streams. In general, each of these features enhances the movement of solutes across the landscape and generates soil conditions suitable for microbial and invertebrate communities.

Nanobiotechnologies in the System of Farm Animals' Gene Pool Preservation

NASA Astrophysics Data System (ADS)

Kovtun, S. I.; Galagan, N. P.; Shcherbak, O. V.; Klymenko, N. Y.; Osypchuk, O. S.

It has been determined that sperm viability and mobility upon long storage in liquid nitrogen is being reduced. This issue is relevant for gene pool objects' preservation and for reproductive medicine. The use of nanomaterials (NM) in reproductive biotechnology can expand to the methodology of the rational gene pool preservation technology, especially of valuable biomaterial. Use of nanoparticles, based on ultrafine silica (UFS) with different agents located on its surface gives a positive effect on the thawed sperm mobility, increasing its activity and survival rate and leading to increased fertilization ability. After thawing, the sperm of bulls had an average activity level of 47 %. This activity index of gametes in control was being maintained for 30 min. In the experimental groups after 30 min, the most active gametes were those with UFS + sucrose (52 %). A lower activity compared with the control and UFS + sucrose had gametes with UFS + D-galactosamine. Sperm activity with UFS + D-galactosamine decreased by 14 % compared with the control and by 19 % compared to the UFS + sucrose. So, the feasibility of adding NM with UFS + sucrose at a concentration of 0.001 % to thawed bull sperm that has been cryopreserved for a long time was proved.

Arctic catchment releases mostly young aquatic carbon despite complete thawing of old organic-rich permafrost soils during growing season.

NASA Astrophysics Data System (ADS)

Dean, Joshua F.; Billett, Michael F.; Dinsmore, Kerry J.; Garnett, Mark H.; van der Velde, Ype

2017-04-01

Radiocarbon (14C) dating of dissolved organic carbon (DOC) in Arctic freshwaters has been used as a crucial tool for detecting old C mobilised from thawing permafrost, but DO14C in major Arctic rivers is usually quite young. New methods for the collection of both CO2 and CH4 from inland waters allow novel observation of dissolved 14CO2 and 14CH4 alongside DO14C, and provide a more sensitive method than aquatic OC alone - published Arctic freshwater 14C studies to date focus only on DOC, particulate OC, or ebullition CH4/CO2. The mobilisation of old C sourced from deepening permafrost soil active-layers into Arctic freshwaters has the potential to form a significant positive climate feedback. We compare 14C in DOC, dissolved CO2 and dissolved CH4 at five time points over a single growing season from streams, ponds and lakes underlain by continuous permafrost in the western Canadian Arctic. Using age distribution analysis based on atmospheric 14CO2 records, we estimated the age of aquatic C that would otherwise be labelled as "modern" due to the 14C bomb peak. We then calculated the vertical and lateral C fluxes in the study systems, and estimated the proportion derived from old permafrost C. The upper organic-rich soils are the dominant hydrologic pathway, which were completely thawed by late season, and we hypothesised that mobilisation of older, deeper organic soil C would be visible in the aquatic 14C by late in the growing season. Early in the season, median aquatic DO14C and CO2 ages were 65-131 years old (all 14C ages reported here are years before sampling date). By the end of the season, DO14C was 156-271 years old, while CO2 was 113-161 years old, demonstrating that aquatic C ages reflect the mobilisation of thawing older permafrost C. CH4 concentrations were generally low throughout and only two dates were obtained: 202 and 1,970 years old. Overall there was limited evidence of very old permafrost organic C, which comprised 0-10% of vertical and lateral aquatic fluxes. Our results demonstrate that permafrost thaw will result in the mobilisation of old C into the aquatic phase as DOC, CO2 and CH4, but also indicate potential resilience within these systems in response to climate change.

Spaceborne Microwave Remote Sensing of Seasonal Freeze-Thaw Processes in the Terrestrial High Latitudes: Relationships with Land-Atmosphere CO2 exchange

NASA Technical Reports Server (NTRS)

McDonald, Kyle C.; Kimball, John S.; Zhao, Maosheng; Njoku, Eni; Zimmermann, Reiner; Running, Steven W.

2004-01-01

Landscape transitions between seasonally frozen and thawed conditions occur each year over roughly 50 million square kilometers of Earth's Northern Hemisphere. These relatively abrupt transitions represent the closest analog to a biospheric and hydrologic on/off switch existing in nature, affecting surface meteorological conditions, ecological trace gas dynamics, energy exchange and hydrologic activity profoundly. We utilize time series satellite-borne microwave remote sensing measurements from the Special Sensor Microwave Imager (SSM/I) to examine spatial and temporal variability in seasonal freeze/thaw cycles for the pan-Arctic basin and Alaska. Regional measurements of spring thaw timing are derived using daily brightness temperature measurements from the 19 GHz, horizontally polarized channel, separately for overpasses with 6 AM and 6 PM equatorial crossing times. Spatial and temporal patterns in regional freeze/thaw dynamics show distinct differences between North America and Eurasia, and boreal forest and Arctic tundra biomes. Annual anomalies in the timing of thawing in spring also correspond closely to seasonal atmospheric CO2 concentration anomalies derived from NOAA CMDL arctic and subarctic monitoring stations. Classification differences between AM and PM overpass data average approximately 5 days for the region, though both appear to be effective surrogates for monitoring annual growing seasons at high latitudes.

Spaceborne microwave remote sensing of seasonal freeze-thaw processes in theterrestrial high l atitudes : relationships with land-atmosphere CO2 exchange

NASA Technical Reports Server (NTRS)

McDonald, Kyle C.; Kimball, John S.; Zhao, Maosheng; Njoku, Eni; Zimmermann, Reiner; Running, Steven W.

2004-01-01

Landscape transitions between seasonally frozen and thawed conditions occur each year over roughly 50 million square kilometers of Earth's Northern Hemisphere. These relatively abrupt transitions represent the closest analog to a biospheric and hydrologic on/off switch existing in nature, affecting surface meteorological conditions, ecological trace gas dynamics, energy exchange and hydrologic activity profoundly. We utilize time series satellite-borne microwave remote sensing measurements from the Special Sensor Microwave Imager (SSM/I) to examine spatial and temporal variability in seasonal freeze/thaw cycles for the pan-Arctic basin and Alaska. Regional measurements of spring thaw timing are derived using daily brightness temperature measurements from the 19 GHz, horizontally polarized channel, separately for overpasses with 6 AM and 6 PM equatorial crossing times. Spatial and temporal patterns in regional freeze/thaw dynamics show distinct differences between North America and Eurasia, and boreal forest and Arctic tundra biomes. Annual anomalies in the timing of thawing in spring also correspond closely to seasonal atmospheric CO2 concentration anomalies derived from NOAA CMDL arctic and subarctic monitoring stations. Classification differences between AM and PM overpass data average approximately 5 days for the region, though both appear to be effective surrogates for monitoring annual growing seasons at high latitudes.

Studies on the intracellular Ca2+ concentration of thawed dog spermatozoa: influence of Equex from different sources, two thawing diluents and post-thaw incubation in capacitating conditions.

PubMed

Peña, A I; López-Lugilde, L; Barrio, M; Becerra, J J; Quintela, L A; Herradón, P G

2003-02-01

The addition of 0.5% (v/v) of Equex STM Paste (Nova Chemical Sales, Scituate Inc., MA, USA), whose active ingredient is sodium dodecyl sulphate (SDS), to a Tris-egg yolk extender was demonstrated to improve the longevity of frozen-thawed dog spermatozoa during in vitro incubation at 38 degrees C. The aim of the first experiment was to compare the effects of two SDS-containing compounds, Equex STM Paste and Equex Pasta (Minitüb, Tiefenbach, Germany), when added to a Tris-egg yolk based extender, on the post-thaw longevity of dog spermatozoa, as well as on the intracellular Ca2+ concentration of spermatozoa, during post-thaw incubation at 38 degrees C. The post-thaw sperm survival and longevity, as well as the quality of the sperm movement, were significantly better when using Equex STM Paste. Such prolonged sperm longevity, however, was associated to a higher intracellular Ca2+ concentration in a large subpopulation of the live spermatozoa. A second experiment was aimed to evaluate the effects of sperm dilution immediately post-thaw with a Tris buffer containing glucose or fructose. The two Tris buffers were no different for any of the sperm parameters studied. The aim of a third experiment was to evaluate the sperm longevity, motility patterns and intracellular Ca2+ concentration of cryopreserved dog spermatozoa during post-thaw incubation in capacitating conditions [canine capacitating medium (CCM) with or without 5 microg/ml of heparin]. Heparin had no significant effects on any of the sperm parameters evaluated. During the first 8 h of incubation, the majority of the live spermatozoa had a high intracellular Ca2+ content. However, after 8-10 h of incubation, it had significantly declined. The highest proportion of fast motile sperm, and the highest curvilinear velocity, average path velocity and amplitude of lateral head displacement for the total motile sperm were observed during the 2-4-h incubation period. It was concluded that: (a) the addition of 0.5% (v/v) of Equex STM Paste to a Tris-egg yolk based extender significantly improved the post-thaw longevity of dog spermatozoa, but the same concentration of Equex Pasta had no significant beneficial effects; (b) sperm dilution after thawing with a Tris buffer containing glucose or fructose made no difference in post-thaw sperm longevity; (c) the addition of 5 microg/ml of heparin to CCM had no significant capacitating effects on frozen-thawed dog spermatozoa.

Diversity and distribution of archaea community along a stratigraphic permafrost profile from Qinghai-Tibetan Plateau, China.

PubMed

Wei, Shiping; Cui, Hongpeng; He, Hao; Hu, Fei; Su, Xin; Zhu, Youhai

2014-01-01

Accompanying the thawing permafrost expected to result from the climate change, microbial decomposition of the massive amounts of frozen organic carbon stored in permafrost is a potential emission source of greenhouse gases, possibly leading to positive feedbacks to the greenhouse effect. In this study, the community composition of archaea in stratigraphic soils from an alpine permafrost of Qinghai-Tibetan Plateau was investigated. Phylogenic analysis of 16S rRNA sequences revealed that the community was predominantly constituted by Crenarchaeota and Euryarchaeota. The active layer contained a proportion of Crenarchaeota at 51.2%, with the proportion of Euryarchaeota at 48.8%, whereas the permafrost contained 41.2% Crenarchaeota and 58.8% Euryarchaeota, based on 16S rRNA gene sequence analysis. OTU1 and OTU11, affiliated to Group 1.3b/MCG-A within Crenarchaeota and the unclassified group within Euryarchaeota, respectively, were widely distributed in all sediment layers. However, OTU5 affiliated to Group 1.3b/MCG-A was primarily distributed in the active layers. Sequence analysis of the DGGE bands from the 16S rRNAs of methanogenic archaea showed that the majority of methanogens belonged to Methanosarcinales and Methanomicrobiales affiliated to Euryarchaeota and the uncultured ZC-I cluster affiliated to Methanosarcinales distributed in all the depths along the permafrost profile, which indicated a dominant group of methanogens occurring in the cold ecosystems.

Diversity and Distribution of Archaea Community along a Stratigraphic Permafrost Profile from Qinghai-Tibetan Plateau, China

PubMed Central

Cui, Hongpeng; He, Hao; Hu, Fei; Su, Xin; Zhu, Youhai

2014-01-01

Accompanying the thawing permafrost expected to result from the climate change, microbial decomposition of the massive amounts of frozen organic carbon stored in permafrost is a potential emission source of greenhouse gases, possibly leading to positive feedbacks to the greenhouse effect. In this study, the community composition of archaea in stratigraphic soils from an alpine permafrost of Qinghai-Tibetan Plateau was investigated. Phylogenic analysis of 16S rRNA sequences revealed that the community was predominantly constituted by Crenarchaeota and Euryarchaeota. The active layer contained a proportion of Crenarchaeota at 51.2%, with the proportion of Euryarchaeota at 48.8%, whereas the permafrost contained 41.2% Crenarchaeota and 58.8% Euryarchaeota, based on 16S rRNA gene sequence analysis. OTU1 and OTU11, affiliated to Group 1.3b/MCG-A within Crenarchaeota and the unclassified group within Euryarchaeota, respectively, were widely distributed in all sediment layers. However, OTU5 affiliated to Group 1.3b/MCG-A was primarily distributed in the active layers. Sequence analysis of the DGGE bands from the 16S rRNAs of methanogenic archaea showed that the majority of methanogens belonged to Methanosarcinales and Methanomicrobiales affiliated to Euryarchaeota and the uncultured ZC-I cluster affiliated to Methanosarcinales distributed in all the depths along the permafrost profile, which indicated a dominant group of methanogens occurring in the cold ecosystems. PMID:25525409

Influence of Pre-Analytical Factors on Thymus- and Activation-Regulated Chemokine Quantitation in Plasma

PubMed Central

Zhao, Xuemei; Delgado, Liliana; Weiner, Russell; Laterza, Omar F.

2015-01-01

Thymus- and activation-regulated chemokine (TARC) in serum/plasma associates with the disease activity of atopic dermatitis (AD), and is a promising tool for assessing the response to the treatment of the disease. TARC also exists within platelets, with elevated levels detectable in AD patients. We examined the effects of pre-analytical factors on the quantitation of TARC in human EDTA plasma. TARC levels in platelet-free plasma were significantly lower than those in platelet-containing plasma. After freeze-thaw, TARC levels increased in platelet-containing plasma, but remained unchanged in platelet-free plasma, suggesting TARC was released from the platelets during the freeze-thaw process. In contrast, TARC levels were stable in serum independent of freeze-thaw. These findings underscore the importance of pre-analytical factors to TARC quantitation. Plasma TARC levels should be measured in platelet-free plasma for accurate quantitation. Pre-analytical factors influence the quantitation, interpretation, and implementation of circulating TARC as a biomarker for the development of AD therapeutics. PMID:28936246

Partial Recovery of Mitochondrial Function of Vitrified Porcine MII Stage Oocytes During Post-Thaw Incubation.

PubMed

Dai, J J; Yang, J H; Zhang, S S; Niu, Y F; Chen, Y N; Wu, C F; Zhang, D F

　　The survival of porcine oocytes is still very low after cryopreservation. To investigate whether and when the mitochondrial function of vitrified porcine oocytes could be recovered post-thaw. Mitochondrial potential, ROS level, ATP content, apoptotic rate, caspase activity, and parthenogenetics developmental ability of thawed porcine oocytes were measured after culture in vitro for 0, 1, 2 or 4 h. Mitochondrial potential after 2 h and 4 h post-thaw culture were 1.19 and 1.26, significantly lower than that of fresh oocytes but much higher than the groups cultured for 0 h and 1 h (P<0.05). Cryopreservation increased the ROS level in oocytes considerably, which decreased only after 2 to 4 h incubation following thaw. ATP content increased gradually over time and recovered to the level comparable to that of fresh oocytes after 4 h. Pan caspase levels increased after cryopreservation and reached the highest level at 1 h incubation. Thereafter it decreased to a low value, but still higher than fresh oocytes. Oocytes showing an early apoptotic event decreased upon 2 to 4 h incubation. The parthenogenetic cleavage and blastocyst rates were the highest (19.8% and 5.6%) after 2 h incubation. The recovery of mitochondrial function could complete after 2 to 4 h post-thaw incubation. Post-thaw incubation for 2 to 4 h reduced apoptotic events and improved parthenogenetic developmental ability of vitrified porcine MII stage oocytes.

Effect of colloid (Androcoll-Bear, Percoll, and PureSperm) selection on the freezability of brown bear (Ursus arctos) sperm.

PubMed

Álvarez-Rodríguez, M; Álvarez, M; Anel-López, L; López-Urueña, E; Manrique, P; Borragán, S; Morrell, J M; de Paz, P; Anel, L

2016-04-01

The development of a species-specific conservation protocol that involves artificial insemination with frozen semen needs to validate an effective methodology for freezing semen. Colloid centrifugation has been suggested and widely applied as an effective tool for selecting animal spermatozoa for artificial breeding. The objective of the present study was to compare different methods of centrifugation, single layer using Androcoll-Bear and Percoll and double layer using PureSperm 100 (in two different discontinuous gradients 40%-80% and 45%-90%), for the selection of fresh brown bear sperm samples. In the before freezing group, all selected samples showed a higher progressive motility and viability (except Percoll for motility 43.0 ± 5.3 [P < 0.05]); all colloids except PureSperm 45/90% rendered samples with fewer damaged acrosomes. In the after thawing group, all tested centrifugation colloids showed a good capacity to decrease the number of damaged acrosomes. Furthermore, PureSperm treatment (45/90%) resulted in an increase in apoptotic-like changes not only immediately after thawing but also after the incubation test, leading us to suggest that this gradient could induce some kind of deleterious effects on the sperm samples. On the other hand, PureSperm treatment (40/80%) yielded a quality preservation capacity similar to Androcoll-Bear in number of damaged acrosomes, different relative to the control (control, 5.3 ± 0.6; PureSperm 80, 2.0 ± 0.3; Androcoll, 2.1 ± 0.9 [P < 0.05]) but a decrease in the number of viable spermatozoa recovered after thawing relative to the control (control, 21.2 ± 3.1; PureSperm 80, 13.7 ± 2.7 [P < 0.05]). In conclusion, Androcoll-Bear constitutes a useful tool for handling of brown bear ejaculates owing to its simple handling and procedure with a reliable sperm selection and freezability. This colloid yielded an improvement in several sperm parameters in brown bear frozen-thawed semen; the selected spermatozoa of fresh samples with this colloid showed a better resistance to freezing compared with the control sample not only for motility but also for viability. Copyright © 2016 Elsevier Inc. All rights reserved.

Thermokarst in pingos and adjacent collapse scar bogs in interior Alaska

NASA Astrophysics Data System (ADS)

Douglas, T. A.; Turetsky, M. R.

2017-12-01

A region of discontinuous permafrost 50 kilometers southeast of Fairbanks, Alaska exhibits rapid thermokarst and landscape change. The area contains a dozen pingos (hydrolaccoliths), mounds of ice covered by earth material typically 100 meters across and 20 meters above the surrounding ground surface. The pingos have sunken craters in their centers formed through melting and collapse of an inner ice lens core. Adjacent to the pingos are collapse scar bogs in various states of formation and ice wedge terrain undergoing thaw subsidence to polygons and thermokarst mounds (baydzherakhs). With a mean annual temperature of -1 degree C the area contains warm ecosystem-protected permafrost vulnerable to thaw. We analyzed historical imagery to the 1970s to track water features in a subset of pingos. The craters have expanded over the past few decades suggesting melting and collapse of the ice cored center and potential permafrost degradation along pingo margins. Collapse scar bogs in adjacent low-elevation terrain are roughly the same size as the pingos but have little vertical elevation gradient compared to the surrounding terrain. Electrical resistivity tomography (ERT) measurements, high resolution GPS surveys, SIPRE coring, and thaw depth probing were focused along nine 400 meter transects across three of the pingos to identify relationships between geophysical properties, permafrost composition, seasonal thaw, and ecological state. A large ( 40 meters across and 20 meters thick) lens shaped region of thawed permafrost is evident in the ERT results about 10 meters below the ground surface in the center of one pingo we surveyed in detail. This is believed to be the original ice cored region of the pingo that has melted. A thin (1-5 meters thick) layer of permafrost is present above this thawed region while the rampart margins surrounding the pingo are underlain by thick (10-30 m) permafrost. The pingo and thermokarst features reside in a location where rapid permafrost thaw in response to warming or changing hydrology could provide a hot spot for landscape change, particularly given a projected climate warming of 5 degrees C over the next 80 years in the area. Their future thermal, geomorphological, and ecological states may be a harbinger for how discontinuous permafrost in the region responds to projected climate warming.

Unprecedented permafrost thaw dynamics on a decadal time scale: Batagay mega thaw slump development, Yana Uplands, Yakutia, Russia

NASA Astrophysics Data System (ADS)

Günther, F.; Grosse, G.; Jones, B. M.; Schirrmeister, L.; Romanovsky, V. E.; Kunitsky, V.

2016-12-01

Ice-rich permafrost that formed in glacial periods of the Quaternary is highly vulnerable to thaw under ongoing climate warming and anthropogenic disturbance. The mega thaw slump near the village of Batagay (Yakutia, Russia) is an outstanding example of permafrost degradation and demonstrates that thermo-erosion processes may occur in unexpected locations, develop very rapidly in particular after disturbances, and leave behind deep rutted badlands. Retrogressive thaw slumps are particularly frequent along riverbanks and coastlines of regions where buried glacier ice or ice-rich glacial till have been mapped. In East Siberia, syngenetic Late Pleistocene Ice Complex (Yedoma) permafrost deposits accumulate volumetric ground ice contents of up to 80-90% % and extend tens of meters below the ground surface. Beyond the Yedoma main distributional range in the coastal lowlands of the Laptev and East Siberian seas, these deposits are also found on slopes of the Verkhoyan Mountain Range and in valleys of surrounding foothills, providing favorable preconditions for rapid thaw development. The Batagay mega slump exposes a profile of 30m thick Yedoma deposits underlain by ice saturated alluvial sand of around 60 m thickness and another very ice-rich layer at the base. We present data from a multi-sensor remote sensing time series investigation of the mega slump in order to assess the planimetric and volumetric dimensions and its decadal and interannual expansion rates. For ortho-rectification purposes and for volumetric analyses, we photogrammetrically derived highly detailed digital elevation models. The height difference between the headwall and the slump outflow is 145 m along a distance of 2300 m, while the maximum slump width is 840 m. Our analysis does not show any signs of stabilization after several decades (since 1980s) of slump growth, with the headwall retreating with observed rates of generally >10 m and more recently up to 30m per year. Reconstruction of a paleo-surface revealed that the slump has carved into the rolling topography to a depth of up to 73 m. The current size of the slump is >69 ha, while it had thawed >25 × 106 m³ of ice-rich permafrost through 2016. The majority of sediment released from the slump episodically dams up the Batagay River, forming a large temporary lake which then empties catastrophically.

Performance of the cometary experiment MUPUS on the body Earth

NASA Astrophysics Data System (ADS)

Marczewski, W.; Usowicz, B.; Schröer, K.; Seiferlin, K.; Spohn, T.

2003-04-01

Thermal experiment MUPUS for the Rosetta mission was extensively experience in field and laboratory conditions to predict its performance under physical processes available on the Earth. The goal was not guessing a cometary material in the ground but available behavior of thermal sensor responses monitoring mass and energy transfer. The processes expected on a comet are different in composition and environmental from those met on the Earth but basically similar in physics. Nature of energy powering the processes is also essentially the same - solar radiation. Several simple laboratory experiments with freezing and thawing with water ice, with mixture of water and oil and water layers strongly diverged by salinity revealed capability of recognition layered structure of the medium under test. More over effects of slow convection and latent heat related to the layers are also observed well. Cometary environment without atmosphere makes process of sublimation dominant. Open air conditions on the Earth may also offer a change of state in matter but between different phases. Learning temperature gradient in snow layers under thawing show that effects stimulated by a cause of daily cycling may be detected thermally. Results from investigations in snow made on Spitzbergen are good proofs on capability of the method. Relevance of thermal effects to heat powered processes of mass transport in the matter of ground is meaningful for the cometary experiment of MUPUS and for Earth sciences much concerned on water, gas and solid matter transport in the terrestrial ground. Results leading to energy balance studied on the Earth surface may be interesting also for the experiment on the comet and are to be discussed.

Increased precipitation drives mega slump development and destabilization of ice-rich permafrost terrain, northwestern Canada

NASA Astrophysics Data System (ADS)

Kokelj, S. V.; Tunnicliffe, J.; Lacelle, D.; Lantz, T. C.; Chin, K. S.; Fraser, R.

2015-06-01

It is anticipated that an increase in rainfall will have significant impacts on the geomorphology of permafrost landscapes. Field observations, remote sensing and historical climate data were used to investigate the drivers, processes and feedbacks that perpetuate the growth of large retrogressive thaw slumps. These "mega slumps" (5-40 ha) are now common in formerly glaciated, fluvially incised, ice-cored terrain of the Peel Plateau, NW Canada. Individual thaw slumps can persist for decades and their enlargement due to ground ice thaw can displace up to 106 m3 of materials from slopes to valley bottoms reconfiguring slope morphology and drainage networks. Analysis of Landsat images (1985-2011) indicate that the number and size of active slumps and debris tongue deposits has increased significantly with the recent intensification of rainfall. The analyses of high resolution climatic and photographic time-series for summers 2010 and 2012 shows strong linkages amongst temperature, precipitation and the downslope sediment flux from active slumps. Ground ice thaw supplies meltwater and sediments to the slump scar zone and drives diurnal pulses of surficial flow. Coherence in the timing of down valley debris tongue deposition and fine-scaled observations of sediment flux indicate that heavy rainfall stimulates major mass flow events. Evacuation of sediments from the slump scar zone can help to maintain a headwall of exposed ground ice, perpetuating slump growth and leading to larger disturbances. The development of debris tongue deposits divert streams and increase thermoerosion to initiate adjacent slumps. We conclude that higher rainfall can intensify thaw slump activity and rapidly alter the slope-sediment cascade in regions of ice-cored glaciogenic deposits.

Freezing Injury in Onion Bulb Cells

PubMed Central

Palta, Jiwan P.; Levitt, Jacob; Stadelmann, Eduard J.

1977-01-01

Onion (Allium cepa L.) bulbs were subjected for 12 days to either a moderate freeze (−4 C) or a severe freeze (−11 C). They were then thawed slowly over ice. During 7 to 12 days following the thaw, the injury progressed with time in the severely frozen bulbs, but appeared completely repaired in the moderately frozen bulbs. This was shown by the following post-thawing changes. Infiltration of the intercellular spaces increased from 80 to 90% to 100% after the severe freeze, and decreased from 30 to 50% to zero after the moderate freeze. All of the cells were alive immediately after thawing whether the freeze was moderate or severe. Corresponding to the infiltration results 7 to 12 days later, many to most were dead following the severe freeze, all were alive following the moderate freeze. The conductivity of the effusate from pieces of bulb tissue increased after the severe freezing, and decreased after the moderate freezing. The concentration of K+, total solutes, and sugars in the effusate paralleled the conductivity changes. Neither the pH of the effusate nor the permeability of the cells (as long as cells were living) to water was changed following either the severe or the moderate freezes. Some treatments of the thawed tissue following the severe freeze halted the progress of injury. The above results indicate that the semipermeable properties of the cell are uninjured but that the ion and sugar transport mechanism is damaged by freezing. Most likely the primary injury is to the active transport mechanism involved in their transport. It must be concluded that the final injury following freezing and thawing cannot be evaluated from the degree of infiltration or the conductivity of the effusate immediately after thawing, since injury may progress or recede following the thawing. PMID:16660101

Monitoring Freeze-Thaw States in the Pan-Arctic: Application of Microwave Remote Sensing to Monitoring Hydrologic and Ecological Processes

NASA Astrophysics Data System (ADS)

McDonald, K. C.; Kimball, J. S.

2004-12-01

The transition of the landscape between predominantly frozen and non-frozen conditions in seasonally frozen environments impacts climate, hydrological, ecological and biogeochemical processes profoundly. Satellite microwave remote sensing is uniquely capable of detecting and monitoring a range of related biophysical processes associated with the measurement of landscape freeze/thaw status. We present the development, physical basis, current techniques and selected hydrological applications of satellite-borne microwave remote sensing of landscape freeze/thaw states for the terrestrial cryosphere. Major landscape hydrological processes embracing the remotely-sensed freeze/thaw signal include timing and spatial dynamics of seasonal snowmelt and associated soil thaw, runoff generation and flooding, ice breakup in large rivers and lakes, and timing and length of vegetation growing seasons and associated productivity and trace gas exchange. Employing both active and passive microwave sensors, we apply a selection of temporal change classification algorithms to examine a variety of hydrologic processes. We investigate contemporaneous and retrospective applications of the QuikSCAT scatterometer, and the SSM/I and SMMR radiometers to this end. Results illustrate the strong correspondence between regional thawing, seasonal ice break up for rivers, and the springtime pulse in river flow. We present the physical principles of microwave sensitivity to landscape freeze/thaw state, recent progress in applying these principles toward satellite remote sensing of freeze/thaw processes over broad regions, and potential for future global monitoring of this significant phenomenon of the global cryosphere. This work was carried out at the Jet Propulsion Laboratory, California Institute of Technology, and at the University of Montana, Missoula, under contract to the National Aeronautics and Space Administration.

Hg Storage and Mobility in Tundra Soils of Northern Alaska

NASA Astrophysics Data System (ADS)

Olson, C.; Obrist, D.

2017-12-01

Atmospheric mercury (Hg) can be transported over long distances to remote regions such as the Arctic where it can then deposit and temporarily be stored in soils. This research aims to improve the understanding of terrestrial Hg storage and mobility in the arctic tundra, a large receptor area for atmospheric deposition and a major source of Hg to the Arctic Ocean. We aim to characterize spatial Hg pool sizes across various tundra sites and to quantify the mobility of Hg from thawing tundra soils using laboratory mobility experiments. Active layer and permafrost soil samples were collected in the summer of 2014 and 2015 at the Toolik Field Station in northern Alaska (68° 38' N) and along a 200 km transect extending from Toolik to the Arctic Ocean. Soil samples were analyzed for total Hg concentration, bulk density, and major and trace elements. Hg pool sizes were estimated by scaling up Hg soil concentrations using soil bulk density measurements. Mobility of Hg in tundra soils was quantified by shaking soil samples with ultrapure Milli-Q® water as an extracting solution for 24 and 72 hours. Additionally, meltwater samples were collected for analysis when present. The extracted supernatant was analyzed for total Hg, dissolved organic carbon, cations and anions, redox, and ph. Mobility of Hg from soil was calculated using Hg concentrations determined in solid soil samples and in supernatant of soil solution samples. Results of this study show Hg levels in tundra mineral soils that are 2-5 times higher than those observed at temperate sites closer to pollution sources. Most of the soil Hg was located in mineral horizons where Hg mass accounted for 72% of the total soil pool. Soil Hg pool sizes across the tundra sites were highly variable (166 - 1,365 g ha-1; avg. 419 g ha-1) due to the heterogeneity in soil type, bulk density, depth to frozen layer, and soil Hg concentration. Preliminary results from the laboratory experiment show higher mobility of Hg in mineral soils of active layer samples (0.062%) than in permafrost soils (0.026%) where soil Hg concentrations were lower. Mobilization of Hg stored in thawing permafrost soils could lead to accelerated export of Hg to aquatic systems, with major implications to Arctic wildlife and human health.

Effects of alginate on frozen-thawed boar spermatozoa quality, lipid peroxidation and antioxidant enzymes activities.

PubMed

Hu, Jinghua; Geng, Guoxia; Li, Qingwang; Sun, Xiuzhu; Cao, Hualin; Liu, Yawei

2014-06-30

Although alginate was reported to play an important role as free radical scavengers in vitro and could be used as sources of natural antioxidants, there was no study about the cryoprotective effects of alginate on boar spermatozoa freezing. The objective of this research was to evaluate the effects of different concentrations of alginate added to the freezing extenders on boar spermatozoa motility, plasma membrane integrity, acrosomal integrity, mitochondrial activities, lipid peroxidation and antioxidative enzymes activities (SOD and GSH-Px) after thawing. Alginate was added to the TCG extender to yield six different final concentrations: 0, 0.2, 0.4, 0.6, 0.8, and 1.0mg/mL. The semen extender supplemented with various doses of alginate increased (P<0.05) total motility. The spermatozoa plasma membrane integrity and mitochondrial activity were improved at four different concentrations: 0.4, 0.6, 0.8, 1.0mg/mL. The addition of alginate also provided significantly positive effect on post-thaw boar spermatozoa acrosomal integrity at concentrations of 0.6, 0.8, 1.0mg/mL, compared with that of the control (P<0.05). The freezing extenders with the presence of alginate led to higher SOD and GSH-Px activities and lower MDA levels, in comparison to the control (P<0.05). In summary, alginate exhibited a dose-related response on frozen-thawed boar spermatozoa motility, functional integrity and antioxidative capacity at appropriate concentrations. Therefore alginate could be employed as an effective cryoprotectant in boar spermatozoa cryopreservation. Copyright © 2014 Elsevier B.V. All rights reserved.

Controls on ecosystem and root respiration across a permafrost and wetland gradient in interior Alaska

Treesearch

N.A McConnell; M.R. Turetsky; A.D. McGuire; E.S. Kane; M.P. Waldrop; J.W. Harden

2013-01-01

Permafrost is common to many northern wetlands given the insulation of thick organic soil layers, although soil saturation in wetlands can lead to warmer soils and increased thaw depth. We analyzed five years of soil CO2 fluxes along a wetland gradient that varied in permafrost and soil moisture conditions. We predicted that communities with...

Antioxidant Effect of Xanthan Gum on Ram Sperm after Freezing and Thawing.

PubMed

Gastal, G DA; Silva, E F; Mion, B; Varela Junior, A S; Rosa, C E; Corcini, C D; Mondadori, R G; Vieira, A D; Bianchi, I; Lucia, T

Xanthan gum is used as thickener in media to preserve food products, having cryoprotectant and antioxidant properties that may be relevant for sperm cryopreservation. To evaluate the effects of adding xanthan gum to freezing extenders on post-thawing quality and oxidant activity of ram sperm. Ejaculates from seven rams extended TRIS-egg yolk-glycerol were split in three treatments including xanthan gum (0.15%; 0.20%; and 0.25%) and a control with no xanthan gum. After thawing, motility and production of reactive oxygen species (ROS) with 0.20% and 0.25% xanthan gum were lower than for the control (P < 0.05), but mitochondrial functionality and integrity of membrane, acrosome and DNA did not differ (P > 0.05). Xanthan gum at 0.20% and 0.25% may be an efficient antioxidant for frozen-thawed ram sperm, due to the reduction in ROS production.

Response of Soil Biogeochemistry to Freeze-thaw Cycles: Impacts on Greenhouse Gas Emission and Nutrient Fluxes

NASA Astrophysics Data System (ADS)

Rezanezhad, F.; Parsons, C. T.; Smeaton, C. M.; Van Cappellen, P.

2014-12-01

Freeze-thaw is an abiotic stress applied to soils and is a natural process at medium to high latitudes. Freezing and thawing processes influence not only the physical properties of soil, but also the metabolic activity of soil microorganisms. Fungi and bacteria play a crucial role in soil organic matter degradation and the production of greenhouse gases (GHG) such as CO2, CH4 and N2O. Production and consumption of these atmospheric trace gases are the result of biological processes such as photosynthesis, aerobic respiration (CO2), methanogenesis, methanotrophy (CH4), nitrification and denitrification (N2O). To enhance our understanding of the effects of freeze-thaw cycles on soil biogeochemical transformations and fluxes, a highly instrumented soil column experiment was designed to realistically simulate freeze-thaw dynamics under controlled conditions. Pore waters collected periodically from different depths of the column and solid-phase analyses on core material obtained at the initial and end of the experiment highlighted striking geochemical cycling. CO2, CH4 and N2O production at different depths within the column were quantified from dissolved gas concentrations in pore water. Subsequent emissions from the soil surface were determined by direct measurement in the head space. Pulsed CO2 emission to the headspace was observed at the onset of thawing, however, the magnitude of the pulse decreased with each subsequent freeze-thaw cycle indicating depletion of a "freeze-thaw accessible" carbon pool. Pulsed CO2 emission was due to a combination of physical release of gases dissolved in porewater and entrapped below the frozen zone and changing microbial respiration in response to electron acceptor variability (O2, NO3-, SO42-). In this presentation, we focus on soil-specific physical, chemical, microbial factors (e.g. redox conditions, respiration, fermentation) and the mechanisms that drive GHG emission and nutrient cycling in soils under freeze-thaw cycles.

Nitrogen availability increases in a tundra ecosystem during five years of experimental permafrost thaw.

PubMed

Salmon, Verity G; Soucy, Patrick; Mauritz, Marguerite; Celis, Gerardo; Natali, Susan M; Mack, Michelle C; Schuur, Edward A G

2016-05-01

Perennially frozen soil in high latitude ecosystems (permafrost) currently stores 1330-1580 Pg of carbon (C). As these ecosystems warm, the thaw and decomposition of permafrost is expected to release large amounts of C to the atmosphere. Fortunately, losses from the permafrost C pool will be partially offset by increased plant productivity. The degree to which plants are able to sequester C, however, will be determined by changing nitrogen (N) availability in these thawing soil profiles. N availability currently limits plant productivity in tundra ecosystems but plant access to N is expected improve as decomposition increases in speed and extends to deeper soil horizons. To evaluate the relationship between permafrost thaw and N availability, we monitored N cycling during 5 years of experimentally induced permafrost thaw at the Carbon in Permafrost Experimental Heating Research (CiPEHR) project. Inorganic N availability increased significantly in response to deeper thaw and greater soil moisture induced by Soil warming. This treatment also prompted a 23% increase in aboveground biomass and a 49% increase in foliar N pools. The sedge Eriophorum vaginatum responded most strongly to warming: this species explained 91% of the change in aboveground biomass during the 5 year period. Air warming had little impact when applied alone, but when applied in combination with Soil warming, growing season soil inorganic N availability was significantly reduced. These results demonstrate that there is a strong positive relationship between the depth of permafrost thaw and N availability in tundra ecosystems but that this relationship can be diminished by interactions between increased thaw, warmer air temperatures, and higher levels of soil moisture. Within 5 years of permafrost thaw, plants actively incorporate newly available N into biomass but C storage in live vascular plant biomass is unlikely to be greater than losses from deep soil C pools. © 2015 John Wiley & Sons Ltd.

Using Distributed Fiber Optic Sensing to Monitor Large Scale Permafrost Transitions: Preliminary Results from a Controlled Thaw Experiment

NASA Astrophysics Data System (ADS)

Ajo Franklin, J. B.; Wagner, A. M.; Lindsey, N.; Dou, S.; Bjella, K.; Daley, T. M.; Freifeld, B. M.; Ulrich, C.; Gelvin, A.; Morales, A.; James, S. R.; Saari, S.; Ekblaw, I.; Wood, T.; Robertson, M.; Martin, E. R.

2016-12-01

In a warming world, permafrost landscapes are being rapidly transformed by thaw, yielding surface subsidence and groundwater flow alteration. The same transformations pose a threat to arctic infrastructure and can induce catastrophic failure of the roads, runways, and pipelines on which human habitation depends. Scalable solutions to monitoring permafrost thaw dynamics are required to both quantitatively understand biogeochemical feedbacks as well as to protect built infrastructure from damage. Unfortunately, permafrost alteration happens over the time scale of climate change, years to decades, a decided challenge for testing new sensing technologies in a limited context. One solution is to engineer systems capable of rapidly thawing large permafrost units to allow short duration experiments targeting next-generation sensing approaches. We present preliminary results from a large-scale controlled permafrost thaw experiment designed to evaluate the utility of different geophysical approaches for tracking the cause, precursors, and early phases of thaw subsidence. We focus on the use of distributed fiber optic sensing for this challenge and deployed distributed temperature (DTS), strain (DSS), and acoustic (DAS) sensing systems in a 2D array to detect thaw signatures. A 10 x 15 x 1 m section of subsurface permafrost was heated using an array of 120 downhole heaters (60 w) at an experimental site near Fairbanks, AK. Ambient noise analysis of DAS datasets collected at the plot, coupled to shear wave inversion, was utilized to evaluate changes in shear wave velocity associated with heating and thaw. These measurements were confirmed by seismic surveys collected using a semi-permanent orbital seismic source activated on a daily basis. Fiber optic measurements were complemented by subsurface thermistor and thermocouple arrays, timelapse total station surveys, LIDAR, secondary seismic measurements (geophone and broadband recordings), timelapse ERT, borehole NMR, soil moisture measurements, hydrologic measurements, and multi-angle photogrammetry. This unusually dense combination of measurement techniques provides an excellent opportunity to characterize the geophysical signatures of permafrost thaw in a controlled environment.

Achieving the NOAA Arctic Action Plan: The Missing Permafrost Element - Permafrost Forecasting Listening Session Results

NASA Astrophysics Data System (ADS)

Buxbaum, T. M.; Thoman, R.; Romanovsky, V. E.

2015-12-01

Permafrost is ground at or below freezing for at least two consecutive years. It currently occupies 80% of Alaska. Permafrost temperature and active layer thickness (ALT) are key climatic variables for monitoring permafrost conditions. Active layer thickness is the depth that the top layer of ground above the permafrost thaws each summer season and permafrost temperature is the temperature of the frozen permafrost under this active layer. Knowing permafrost conditions is key for those individuals working and living in Alaska and the Arctic. The results of climate models predict vast changes and potential permafrost degradation across Alaska and the Arctic. NOAA is working to implement its 2014 Arctic Action Plan and permafrost forecasting is a missing piece of this plan. The Alaska Center for Climate Assessment and Policy (ACCAP), using our webinar software and our diverse network of statewide stakeholder contacts, hosted a listening session to bring together a select group of key stakeholders. During this listening session the National Weather Service (NWS) and key permafrost researchers explained what is possible in the realm of permafrost forecasting and participants had the opportunity to discuss and share with the group (NWS, researchers, other stakeholders) what is needed for usable permafrost forecasting. This listening session aimed to answer the questions: Is permafrost forecasting needed? If so, what spatial scale is needed by stakeholders? What temporal scales do stakeholders need/want? Are there key times (winter, fall freeze-up, etc.) or locations (North Slope, key oil development areas, etc.) where forecasting would be most applicable and useful? Are there other considerations or priority needs we haven't thought of regarding permafrost forecasting? This presentation will present the results of that listening session.

Liquid nitrogen vapor is comparable to liquid nitrogen for storage of cryopreserved human sperm: evidence from the characteristics of post-thaw human sperm.

PubMed

Hu, Jingmei; Zhao, Shidou; Xu, Chengyan; Zhang, Lin; Lu, Shaoming; Cui, Linlin; Ma, Jinlong; Chen, Zi-Jiang

2015-11-01

To compare the differences in the characteristics of post-thaw human sperm after storage in either liquid nitrogen (LN2; -196 °C) or LN2 vapor (-167 °C). Experimental study. University hospital. Thirty healthy volunteers who agreed to donate their normal semen samples for infertility or research were included in the study. Semen samples (n = 30) were divided into eight aliquots and frozen. Four aliquots of each human semen sample were stored in LN2 (-196 °C), and the other four aliquots were stored in LN2 vapor (-167 °C). After 1, 3, 6, or 12 months, samples were thawed and analyzed. The motility was evaluated by the manual counting method. The viability was estimated by eosin staining. The morphology was analyzed by Diff-Quik staining. The sperm DNA integrity was determined with acridine orange fluorescent staining, and acrosin activity was assayed by the modified Kennedy method. The characteristics of post-thaw human sperm, including motility, viability, morphology, DNA integrity, and acrosin activity, showed no significant difference between LN2 and LN2 vapor storage for the different time periods. LN2 vapor was comparable to LN2 in post-thaw sperm characteristics, suggesting that LN2 vapor may be substituted for LN2 for the long-term storage of human sperm. Copyright © 2015 American Society for Reproductive Medicine. Published by Elsevier Inc. All rights reserved.

Development of the Soil Moisture Active Passive (SMAP) radiometer derived landscape freeze/thaw product

NASA Astrophysics Data System (ADS)

Colliander, A.; Xu, X.; Dunbar, R. S.; Derksen, C.; Kim, Y.; Kimball, J. S.

2016-12-01

A baseline SMAP mission objective was to determine the land surface binary freeze/thaw (FT) state for northern (>45°N) regions with 80% spatial classification accuracy at 3 km resolution and 2-day average intervals. These requirements were initially achieved from the SMAP radar until the sensor failed in July 2015. The FT algorithm is now transitioning to using SMAP radiometer inputs. The main compromises of this change are a coarse (36 km) radiometer footprint, enhanced noise and potential FT signal degradation from seasonal vegetation biomass, soil moisture and surface inundation changes. The new daily passive FT product (L3_FT_P) is based on the same seasonal threshold algorithm as the radar derived product (L3_FT_A): instantaneous SMAP measurements are compared to reference signatures acquired during seasonal frozen and thawed states. Instead of radar inputs, the normalized polarization ratio (NPR) is calculated from SMAP radiometer measurements. The L3_FT_P algorithm is applied using NPR inputs, whereby NPR decreases and increases are associated with respective landscape freezing and thawing. A lower NPR under frozen conditions is due to smaller V-pol brightness temperature increases and larger H-pol increases. Using in situ measurements from core validation sites, the temporal behavior of backscatter and NPR measurements were evaluated during the spring 2015 radar and radiometer overlap period. The transition from frozen to thawed states produced a NPR response similar in timing and magnitude to the radar response, resulting in similar freeze to thaw seasonal transition dates. While the post-thaw radar backscatter consistently remained at elevated values relative to the frozen state, the NPR drifted downwards following the main thaw transition (due to de-polarization of the scene), which may introduce false freeze classification errors. Both radar and radiometer results tended to lead observed soil thawing due to strong sensitivity of the microwave retrievals to wet snow. Continued analysis of SMAP radiometer measurements will help to identify different landscape components of the SMAP freeze-thaw temporal signal.

Comparative evaluation of Nabi and Beltsville extenders for cryopreservation of rooster semen.

PubMed

Nabi, Mohammad Mahdi; Kohram, Hamid; Zhandi, Mahdi; Mehrabani-Yeganeh, Hassan; Sharideh, Hossein; Zare-Shahaneh, Ahmad; Esmaili, Vahid

2016-02-01

Two experiments were conducted to evaluate the new rooster semen freezing extender which is containing a low level of glycerol and soybean lecithin as an alternative protective agent in the extender. The aim of the first experiment was to evaluate a new extender for freeze-thawing rooster semen known as "Nabi" extender compared to Beltsville. Second experiment was also performed to determine whether the Nabi extender has negative reactions on fertilization after artificial insemination (AI) or no. In the first experiment, post-thaw motion parameters, mitochondrial function and sperm apoptosis were analyzed using Sperm Class Analyzer (SCA), rhodamine-123 and Annexin-V, respectively for frozen-thawed semen in Nabi and Beltsville extender. Results showed that total motility, progressive motility, velocity parameters (VCL, VSL, VAP, LIN and STR) and live spermatozoa with active mitochondria were significantly higher in Nabi compare to Beltsville extender (P < 0.01). Also, the percentages of post-thawed live and early apoptotic spermatozoa were significantly higher in Nabi compared to Beltsville extender (14.46 ± 0.95 vs. 19.27 ± 0.95 and 14.83 ± 4.51 vs. 39.27 ± 4.51, respectively). For apoptotic spermatozoa, the percentages of post-thawed late apoptotic spermatozoa were significantly lower in Nabi (29.66 ± 3.11) compared to Beltsville extender (69.07 ± 3.11), but the type of extender had no effect on the percentages of post-thawed necrotic spermatozoa. In the second experiment, 20 broiler breeder hens (Ross 308) were inseminated with thawed semen using the new freezing diluents or fresh semen for determination of fertility rate. Fertility rate with thawed semen (with Nabi extender) was lower compared to fresh semen (by approximately 8% points). It can be concluded that Nabi extender would improve post-thawed rooster sperm in vitro quality compared to Beltsville extender. The fertility rates of insemination in hens with freeze-thaw sperm were comparable with fresh sperm. Copyright © 2015 Elsevier Inc. All rights reserved.

Pronuclear formation by ICSI using chemically activated ovine oocytes and zona pellucida bound sperm.

PubMed

Hernández-Pichardo, J E; Ducolomb, Y; Romo, S; Kjelland, M E; Fierro, R; Casillas, F; Betancourt, M

2016-01-01

In order to improve ICSI, appropiate sperm selection and oocyte activation is necessary. The objective of the present study was to determine the efficiency of fertilization using ICSI with chemically activated ovine oocytes and sperm selected by swim up (SU) or swim up + zona pellucida (SU + ZP) binding. Experiment 1, 4-20 replicates with total 821 in vitro matured oocytes were chemically activated with ethanol, calcium ionophore or ionomycin, to determine oocyte activation (precense of one PN). Treatments showed similar results (54, 47, 42 %, respectively) but statistically differents ( P  < 0.05) than mechanical activated oocytes in sham, ICSI and sham injection (13, 25, 32 %, respectively) (10-17 replicates; n  = 429). Experiment 2: Twelve ejaculates and 28 straws of semen were used (11-19 replicates). Sperm were selected by SU in BSA-TCM 199-H medium. A total of 2,294 fresh sperm and 2,760 from frozen-thawed semen were analyzed after SU or SU + ZP binding. Fresh sperm selected by SU showed acrosome reaction (AR) of 59 %, the sperm selected by SU + ZP binding increased AR to 91 %. In comparison, the AR of frozen-thawed sperm using SU or SU + ZP binding was 77 and 86 %, respectively ( P  < 0.05). Experiment 3: fertilization in 200 mechanical activativated oocytes (17 replicates) was 4 %, but fertilization increased in ethanol activated oocytes after ICSI (12-28 %) (5-6 replicates). When fresh sperm only selected by SU were injected to 123 oocytes, a fertilization rate (28 %) was achieved; in sperm selected by SU + ZP was 25 % (73 oocytes). In comparison, in frozen-thawed sperm selected by SU, fertilization was 13 % (70 oocytes), whereas sperm from SU + ZP binding displayed 12 % (51 oocytes) ( P  > 0.05). Chemical activation induces higher ovine oocyte activation than mechanical activation. Ethanol slightly displays higher oocyte activation than calcium ionophore and ionomicine. Sperm selection with SU + ZP increased AR/A and AR/D rates in comparison with SU in fresh and frozen-thawed sperm. According to this, in terms of fertilization rates, chemical activation after ICSI increased oocyte PN formation compared to mechanical activation. Also, fresh sperm treated with SU and SU + ZP were significantly different than frozen-thawed sperm, but between sperm treatments no significant differences were obtained.

Subsurface flow pathway dynamics in the active layer of coupled permafrost-hydrogeological systems under seasonal and annual temperature variability.

NASA Astrophysics Data System (ADS)

Frampton, Andrew

2017-04-01

There is a need for improved understanding of the mechanisms controlling subsurface solute transport in the active layer in order to better understand permafrost-hydrological-carbon feedbacks, in particular with regards to how dissolved carbon is transported in coupled surface and subsurface terrestrial arctic water systems under climate change. Studying solute transport in arctic systems is also relevant in the context of anthropogenic pollution which may increase due to increased activity in cold region environments. In this contribution subsurface solute transport subject to ground surface warming causing permafrost thaw and active layer change is studied using a physically based model of coupled cryotic and hydrogeological flow processes combined with a particle tracking method. Changes in subsurface water flows and solute transport travel times are analysed for different modelled geological configurations during a 100-year warming period. Results show that for all simulated cases, the minimum and mean travel times increase non-linearly with warming irrespective of geological configuration and heterogeneity structure. The timing of the start of increase in travel time depends on heterogeneity structure, combined with the rate of permafrost degradation that also depends on material thermal and hydrogeological properties. These travel time changes are shown to depend on combined warming effects of increase in pathway length due to deepening of the active layer, reduced transport velocities due to a shift from horizontal saturated groundwater flow near the surface to vertical water percolation deeper into the subsurface, and pathway length increase and temporary immobilization caused by cryosuction-induced seasonal freeze cycles. The impact these change mechanisms have on solute and dissolved substance transport is further analysed by integrating pathway analysis with a Lagrangian approach, incorporating considerations for both dissolved organic and inorganic carbon releases. Further model development challenges are also highlighted and discussed, including coupling between subsurface and surface runoff, soil deformations, as well as site applications and larger system scales.

Elemental composition and optical properties reveal changes in dissolved organic matter along a permafrost thaw chronosequence in a subarctic peatland

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hodgkins, Suzanne B.; Tfaily, Malak M.; Podgorski, David C.

2016-08-01

The fate of carbon stored in permafrost-zone peatlands represents a significant uncertainty in global climate modeling. Given that the breakdown of dissolved organic matter (DOM) is often a major pathway for decomposition in peatlands, knowledge of DOM reactivity under different permafrost regimes is critical for determining future climate feedbacks. To explore the effects of permafrost thaw and resultant plant succession on DOM reactivity, we used a combination of Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS), UV/Vis absorbance, and excitation-emission matrix spectroscopy (EEMS) to examine the DOM elemental composition and optical properties of 27 pore water samples gathered frommore » various sites along a permafrost thaw sequence in Stordalen Mire, a thawing subarctic peatland in northern Sweden. The presence of dense Sphagnum moss, a feature that is dominant in the intermediate thaw stages, appeared to be the main driver of variation in DOM elemental composition and optical properties at Stordalen. Specifically, DOM from sites with Sphagnum had greater aromaticity, higher average molecular weights, and greater O/C, consistent with a higher abundance of phenolic compounds that likely inhibit decomposition. These compounds are released by Sphagnum and may accumulate due to inhibition of phenol oxidase activity by the acidic pH at these sites. In contrast, sites without Sphagnum, specifically fully-thawed rich fens, had more saturated, more reduced compounds, which were high in N and S. Optical properties at rich fens were indicated the presence of microbially-derived DOM, consistent with the higher decomposition rates previously measured at these sites. These results indicate that Sphagnum acts as an inhibitor of rapid decomposition and CH4 release in thawing subarctic peatlands, consistent with lower rates of CO2 and CH4 production previously observed at these sites. However, this inhibitory effect may disappear if Sphagnumdominated bogs transition to more waterlogged rich fens that contain very little to no living Sphagnum. Release of this inhibition allows for higher levels of microbial activity and potentially greater CH4 release, as has been observed in these fen sites.« less

Elemental composition and optical properties reveal changes in dissolved organic matter along a permafrost thaw chronosequence in a subarctic peatland

NASA Astrophysics Data System (ADS)

Hodgkins, Suzanne B.; Tfaily, Malak M.; Podgorski, David C.; McCalley, Carmody K.; Saleska, Scott R.; Crill, Patrick M.; Rich, Virginia I.; Chanton, Jeffrey P.; Cooper, William T.

2016-08-01

The fate of carbon stored in permafrost-zone peatlands represents a significant uncertainty in global climate modeling. Given that the breakdown of dissolved organic matter (DOM) is often a major pathway for decomposition in peatlands, knowledge of DOM reactivity under different permafrost regimes is critical for determining future climate feedbacks. To explore the effects of permafrost thaw and resultant plant succession on DOM reactivity, we used a combination of Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS), UV/Vis absorbance, and excitation-emission matrix spectroscopy (EEMS) to examine the DOM elemental composition and optical properties of 27 pore water samples gathered from various sites along a permafrost thaw sequence in Stordalen Mire, a thawing subarctic peatland in northern Sweden. The presence of dense Sphagnum moss, a feature that is dominant in the intermediate thaw stages, appeared to be the main driver of variation in DOM elemental composition and optical properties at Stordalen. Specifically, DOM from sites with Sphagnum had greater aromaticity, higher average molecular weights, and greater O/C, consistent with a higher abundance of phenolic compounds that likely inhibit decomposition. These compounds are released by Sphagnum and may accumulate due to inhibition of phenol oxidase activity by the acidic pH at these sites. In contrast, sites without Sphagnum, specifically fully-thawed rich fens, had more saturated, more reduced compounds, which were high in N and S. Optical properties at rich fens indicated the presence of microbially-derived DOM, consistent with the higher decomposition rates previously measured at these sites. These results indicate that Sphagnum acts as an inhibitor of rapid decomposition and CH4 release in thawing subarctic peatlands, consistent with lower rates of CO2 and CH4 production previously observed at these sites. However, this inhibitory effect may disappear if Sphagnum-dominated bogs transition to more waterlogged rich fens that contain very little to no living Sphagnum. Release of this inhibition allows for higher levels of microbial activity and potentially greater CH4 release, as has been observed in these fen sites.

Modelling high Arctic deep permafrost temperature sensitivity in Northeast Greenland based on experimental and field observations

NASA Astrophysics Data System (ADS)

Rasmussen, Laura Helene; Zhang, Wenxin; Hollesen, Jørgen; Cable, Stefanie; Hvidtfeldt Christiansen, Hanne; Jansson, Per-Erik; Elberling, Bo

2017-04-01

Permafrost affected areas in Greenland are expected to experience a marked temperature increase within decades. Most studies have considered near-surface permafrost sensitivity, whereas permafrost temperatures below the depths of zero annual amplitude is less studied despite being closely related to changes in near-surface conditions, such as changes in active layer thermal properties, soil moisture and snow depth. In this study, we measured the sensitivity of thermal conductivity (TC) to gravimetric water content (GWC) in frozen and thawed permafrost sediments from fine-sandy and gravelly deltaic and fine-sandy alluvial deposits in the Zackenberg valley, NE Greenland. We further calibrated a coupled heat and water transfer model, the "CoupModel", for one central delta sediment site with average snow depth and further forced it with meteorology from a nearby delta sediment site with a topographic snow accumulation. With the calibrated model, we simulated deep permafrost thermal dynamics in four 20-year scenarios with changes in surface temperature and active layer (AL) soil moisture: a) 3 °C warming and AL water table at 0.5 m depth; b) 3 °C warming and AL water table at 0.1 m depth; c) 6 °C warming and AL water table at 0.5 m depth and d) 6 °C warming and AL water table at 0.1 m depth. Our results indicate that frozen sediments have higher TC than thawed sediments. All sediments show a positive linear relation between TC and soil moisture when frozen, and a logarithmic one when thawed. Gravelly delta sediments were highly sensitive, but never reached above 12 % GWC, indicating a field effect of water retention capacity. Alluvial sediments are less sensitive to soil moisture than deltaic (fine and coarse) sediments, indicating the importance of unfrozen water in frozen sediment. The deltaic site with snow accumulation had 1 °C higher mean annual ground temperature than the average snow depth site. Permafrost temperature at the depth of 18 m increased with 1.5 °C and 3.5 °C in the scenarios with 3 °C and 6 °C warming, respectively. Increasing the soil moisture had no important additional effect to warming, although an increase in thermal offset was indicated. We conclude that below-ground sediment properties affect the sensitivity of TC to GWC, that surface temperature changes can influence the deep permafrost within a short time scale, and that differences in snow depth affect surface temperatures. Sediment type and the type of precipitation should thus be considered when estimating future High Arctic deep permafrost sensitivity.

Optimization of dendritic cell loading with tumor cell lysates for cancer immunotherapy.

PubMed

Hatfield, Paul; Merrick, Alison E; West, Emma; O'Donnell, Dearbhaile; Selby, Peter; Vile, Richard; Melcher, Alan A

2008-09-01

The immune response to cancer is critically determined by the way in which tumor cells die. As necrotic, stress-associated death can be associated with activation of antitumor immunity, whole tumor cell antigen loading strategies for dendritic cell (DC)-based vaccination have commonly used freeze-thaw "necrotic" lysates as an immunogenic source of tumor-associated antigens. In this study, the effect of such lysates on the ability of DCs to mature in response to well-established maturation stimuli was examined, and methods to enhance lysate-induced DC activation explored. Freeze-thaw lysates were prepared from murine tumor cell lines and their effects on bone marrow-derived DC maturation and function examined. Unmodified freeze-thaw tumor cell lysates inhibited the toll-like receptor-induced maturation and function of bone marrow-derived DCs, preventing up-regulation of CD40, CD86, and major histocompatibility complex class II, and reducing secretion of inflammatory cytokines [interleukin (IL)-12 p70, tumor necrosis factor-alpha, and IL-6]. Although IL-10 secretion was increased by lysate-pulsed DCs, this was not responsible for the observed suppression of IL-12. Although activation of the nuclear factor-kappaB pathway remained intact, the kinase activity of phosphorylated p38 mitogen-activated protein kinase was inhibited in lysate-pulsed DCs. Lysate-induced DC suppression was partially reversed in vitro by induction of tumor cell stress before lysis, and only DCs loaded with stressed lysates afforded protection against tumor challenge in vivo. These data suggest that ex vivo freeze-thaw of tumor cells does not effectively mimic in vivo immunogenic necrosis, and advocates careful characterization and optimization of tumor cell-derived vaccine sources for cancer immunotherapy.

Snow control on active layer and permafrost in steep alpine rock walls (Aiguille du Midi, 3842 m a.s.l, Mont Blanc massif)

NASA Astrophysics Data System (ADS)

Magnin, Florence; Westermann, Sebastian; Pogliotti, Paolo; Ravanel, Ludovic; Deline, Philip

2016-04-01

Permafrost degradation through the thickening of the active layer and the rising temperature at depth is a crucial process of rock wall stability. The ongoing increase in rock falls observed during hot periods in mid-latitude mountain ranges is regarded as a result of permafrost degradation. However, the short-term thermal dynamics of alpine rock walls are misunderstood since they result of complex processes related to the interaction of local climate variables, heterogeneous snow cover and heat transfers. As a consequence steady-state and long-term changes that can be approached with simpler process mainly related to air temperature, solar radiations and heat conduction were the most common dynamics to be studied so far. The effect of snow on the bedrock surface temperature is increasingly investigated and has already been demonstrated to be an essential factor of permafrost distribution. Nevertheless, its effect on the year-to-year changes of the active layer thickness and of the permafrost temperature in steep alpine bedrock has not been investigated yet, partly due to the lack of appropriate data. We explore the role of snow accumulations on the active layer and permafrost thermal regime of steep rock walls of a high-elevated site, the Aiguille du Midi (AdM, 3842 m a.s.l, Mont Blanc massif, Western European Alps) by mean of a multi-methods approach. We first analyse six years of temperature records in three 10-m-deep boreholes. Then we describe the snow accumulation patterns on two rock faces by means of automatically processed camera records. Finally, sensitivity analyses of the active layer thickness and permafrost temperature towards timing and magnitude of snow accumulations are performed using the numerical permafrost model CryoGrid 3. The energy balance module is forced with local meteorological measurements on the AdM S face and validated with surface temperature measurements at the weather station location. The heat conduction scheme is calibrated with the temperature measurements in the S-exposed borehole. Results show that the snow may be responsible for permafrost presence while it is absent in the surrounding snow free bedrock. The long lasting of the snow at high elevation, where it can remain until the mid-summer has a delaying effect on the seasonal thaw, which contributes to the lowering of the active layer thickness.

Data analysis and hydrological modelling of frozen ground, shallow groundwater formation and river flow co-evolution at small watersheds of Russia in continuous, discontinuous permafrost and the zone of seasonal ground freezing

NASA Astrophysics Data System (ADS)

Lebedeva, Luidmila; Semenova, Olga

2015-04-01

Frozen ground distribution and its properties control the presence of aquifuge and aquifers. Correct representation of interactions between infiltrating water, ground ice, permafrost or seasonal freezing table and river flow is challenging for hydrological modelling in cold regions. Observational data of ground water levels, thawing depths in different landscapes or topographical units and meteorological information with high temporal and spatial resolution are required to analyze seasonal and interannual evolution of groundwater in active layer and its linkage to river flow. Such data are extremely rare in vast and remote regions of Russia. There are few historical datasets inherited from former USSR containing unique collection of long-term daily observations of water fluxes, frozen ground characteristics and groundwater levels. The data from three water balance stations were employed in our study with overall goal to analyze co-evolution of thawing layer, shallow groundwater and river flow by data processing and process-based modelling. Three instrumented small watersheds are situated in continuous, discontinuous permafrost zones and at the territory with seasonally frozen ground. They present different climates, landscapes and geology. The Kolyma water-balance station is located in mountainous region of continuous permafrost in North-Eastern Russia. The watershed area of 22 km2 is covered by bare rocks, mountain tundra, sparse larch forest and wet larch forest depending on slope aspect and inclination. The Bomnak water-balance station (22 km2) is situated in discontinuous permafrost zone in upper part of the Amur River basin and characterized by unmerged permafrost. Dominant landscapes are birch forest and bogs. The Pribaltiyskaya water-balance station (40 km2) located in Latvia is characterized by seasonally frozen ground and is covered by mixed forest and arable land. Process-based Hydrograph model was employed in the study. The model was developed specifically for cold regions. It describes all essential processes of land hydrological cycle including detailed algorithm of water and heat dynamics in soil accounting for water phase change. The model parameters relate to basin characteristics and could be assessed in the field. It allows avoiding parameters calibration and transferring model parameterization schemes to ungauged basins in similar conditions. The model was applied and tested against internal states of watersheds (snow, soil thawing/freezing, etc.) and runoff. Different role of frozen ground in formation of shallow groundwater and river flow in continuous, discontinuous and non-permafrost area is highlighted by comparative analysis of observations and simulations in three studied basins. The changes of fractional input of surface and subsurface components into river flow during warm seasons were assessed for each watershed. We concluded that verified hydrological model with meaningful parameters that adequately describe river flow formation and internal hydrological processes and ground freezing/thawing in the catchment could be used in scenario simulations, future predictions and transferring the results between scales.

Effect of cryopreservation and transplantation on the expression of kit ligand and anti-Mullerian hormone in human ovarian tissue.

PubMed

David, Anu; Van Langendonckt, Anne; Gilliaux, Sébastien; Dolmans, Marie-Madeleine; Donnez, Jacques; Amorim, Christiani A

2012-04-01

Although cryopreservation and transplantation of ovarian tissue represent a promising alternative to safeguard fertility in cancer patients, low recovery rates of oocytes aspirated from antral follicles and a significant number of empty follicles have been observed in women with transplanted frozen-thawed ovarian tissue. In order to understand how freezing and/or grafting may affect follicular development, the follicular expression of kit ligand (KL) and anti-Müllerian hormone (AMH), two key factors activating and inhibiting follicle growth, were assessed after long-term grafting in severe combined immunodeficient (SCID) mice. Ovarian biopsies from eight patients were used for fresh and frozen-thawed tissue xenografting in 13 SCID mice for a period of 28 weeks, including 2 weeks of gonadotrophin stimulation. KL, AMH and proliferating cell nuclear antigen (PCNA) immunostaining were quantified before and after grafting in the two treatment groups (fresh and frozen-thawed grafted ovarian tissue). Lower expression of KL was found in primordial and primary follicles after grafting of both fresh and frozen-thawed tissue. Consistent expression of AMH was found in most growing follicles at a similar rate in both graft types. In fresh and frozen-thawed grafts, 13-14% of primordial follicles were PCNA-positive, indicating a similar maintenance of quiescent follicles despite follicle activation. Grafting and/or gonadotrophin stimulation appear to affect the follicular expression of KL, which may alter oocyte quality. AMH expression in growing follicles after ovarian tissue transplantation may be one of the factors contributing to the preservation of resting follicles in 28-week-old grafts.

Cryopreserved or Fresh Mesenchymal Stromal Cells: Only a Matter of Taste or Key to Unleash the Full Clinical Potential of MSC Therapy?

PubMed

Moll, Guido; Geißler, Sven; Catar, Rusan; Ignatowicz, Lech; Hoogduijn, Martin J; Strunk, Dirk; Bieback, Karen; Ringdén, Olle

2016-01-01

Mesenchymal stromal cells (MSCs) harbor great therapeutic potential for numerous diseases. From early clinical trials, success and failure analysis, bench-to-bedside and back-to-bench approaches, there has been a great gain in knowledge, still leaving a number of questions to be answered regarding optimal manufacturing and quality of MSCs for clinical application. For treatment of many acute indications, cryobanking may remain a prerequisite, but great uncertainty exists considering the therapeutic value of freshly thawed (thawed) and continuously cultured (fresh) MSCs. The field has seen an explosion of new literature lately, outlining the relevance of the topic. MSCs appear to have compromised immunomodulatory activity directly after thawing for clinical application. This may provide a possible explanation for failure of early clinical trials. It is not clear if and how quickly MSCs recover their full therapeutic activity, and if the "cryo stun effect" is relevant for clinical success. Here, we will share our latest insights into the relevance of these observations for clinical practice that will be discussed in the context of the published literature. We argue that the differences of fresh and thawed MSCs are limited but significant. A key issue in evaluating potency differences is the time point of analysis after thawing. To date, prospective double-blinded randomized clinical studies to evaluate potency of both products are lacking, although recent progress was made with preclinical assessment. We suggest refocusing therapeutic MSC development on potency and safety assays with close resemblance of the clinical reality.

Response of organic matter quality in permafrost soils to warming

NASA Astrophysics Data System (ADS)

Plaza, C.; Pegoraro, E.; Schuur, E.

2016-12-01

Global warming is predicted to thaw large quantities of the perennially frozen organic matter stored in northern permafrost soils. Upon thaw, this organic matter will be exposed to lateral export to water bodies and to microbial decomposition, which may exacerbate climate change by releasing significant amounts of greenhouse gases. To gain an insight into these processes, we investigated how the quality of permafrost soil organic matter responded to five years of warming. In particular, we sampled control and experimentally warmed soils in 2009 and 2013 from an experiment established in 2008 in a moist acidic tundra ecosystem in Healy, Alaska. We examined surface organic (0 to 15 cm), deep organic (15 to 35 cm), and mineral soil layers (35 to 55 cm) separately by means of stable isotope analysis (δ13C and δ15N) and solid-state 13C nuclear magnetic resonance. Compared to the control, the experimental warming did not affect the isotopic and molecular composition of soil organic matter across the depth profile. However, we did find significant changes with time. In particular, in the surface organic layer, δ13C decreased and alkyl/O-alkyl ratio increased from 2009 to 2013, which indicated variations in soil organic sources (e.g., changes in vegetation) and accelerated decomposition. In the deep organic layer, we found a slight increase in δ15N with time. In the mineral layer, δ13C values decreased slightly, whereas alkyl C/O-alkyl ratio increased, suggesting a preferential loss of relatively more degraded organic matter fractions probably by lateral transport by water flowing through the soil. Acknowledgements: This project has received funding from the European Union's Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No. 654132. Web site: http://vulcan.comule.com

Cryopreservation of adenovirus-transfected dendritic cells (DCs) for clinical use.

PubMed

Gülen, D; Maas, S; Julius, H; Warkentin, P; Britton, H; Younos, I; Senesac, J; Pirruccello, Samuel M; Talmadge, J E

2012-05-01

In this study, we examined the effects of cryoprotectant, freezing and thawing, and adenovirus (Adv) transduction on the viability, transgene expression, phenotype, and function of human dendritic cells (DCs). DCs were differentiated from cultured peripheral blood (PB) monocytes following Elutra isolation using granulocyte-macrophage colony-stimulating factor (GM-CSF) and interleukin-4 (IL-4) for 6 days and then transduced using an Adv vector with an IL-12 transgene. Fresh, cryopreserved, and thawed transduced immature DCs were examined for their: 1) cellular concentration and viability; 2) antigenicity using an allogeneic mixed lymphocyte reaction (MLR); 3) phenotype (HLA-DR and CD11c) and activation (CD83); and 4) transgene expression based on IL-12 secretion. Stability studies revealed that transduced DCs could be held in cryoprotectant for as long as 75 min at 2-8°C prior to freezing with little effect on their viability and cellularity. Further, cryopreservation, storage, and thawing reduced the viability of the transduced DCs by an average of 7.7%; and had no significant impact on DC phenotype and activation. In summary, cryopreservation, storage, and thawing had no significant effect on DC viability, function, and transgene expression by Adv-transduced DCs. Copyright © 2012 Elsevier B.V. All rights reserved.

Improvement of post-thawed sperm quality and fertility of Arian rooster by oral administration of d-aspartic acid.

PubMed

Ansari, Mahdi; Zhandi, Mahdi; Kohram, Hamid; Zaghari, Mojtaba; Sadeghi, Mostafa; Sharafi, Mohsen

2017-04-01

This study was conducted to investigate the effect of d-Aspartic acid (D-Asp) on post-thawed sperm quality, fertility and hatchability outcomes in male broiler breeders. Twenty 55-week-old roosters were selected and equally split into four groups (n = 5 rooster/group). Different daily D-Asp doses including 0 (D-0), 100 (D-100), 200 (D-200) or 300 (D-300) mg/kg BW were capsulated and individually administered for 12 weeks to roosters in each group. Semen samples were weekly collected from 7th to 12th week of experiment. Sperm quality from 7th to 11th week was evaluated in both fresh (total and forward motility and plasma membrane functionality) and post-thawed (total and forward motility, plasma membrane functionality, apoptosis status and mitochondrial activity) conditions. Also, collected semen samples on the 12th week were frozen and artificially inseminated to evaluate fertility and hatchability. The results from fresh condition showed that total and forward motility and plasma membrane functionality were significantly higher in D-200 compared to other groups. Also, interaction effect of time and treatment was not significant for all assessed parameters in fresh condition. In post-thawed condition, D-200 showed significantly higher total and forward motility, fertility and hatchability compared to other groups. The higher value for plasma membrane functionality and mitochondrial activity was observed in D-200 compared to D-0 and D300 groups. However, the percentage of live, early apoptotic and dead spermatozoa were not significantly affected by applied treatment in the current study. No significant difference for time and treat interaction effect was observed for all assessed parameters except forward motility. In conclusion, it seems that D-Asp administration could improve fresh and post-thawed sperm quality and post-thawed sperm fertility in male broiler breeders. Copyright © 2017 Elsevier Inc. All rights reserved.

Effects of elevated temperatures and rising sea level on Arctic Coast

USGS Publications Warehouse

Barnes, Peter W.

1990-01-01

Ice is a major agent on the inner shelf, gouging the bottom, increasing hydraulic scour, transporting sediment, and influencing river flood patterns. Rapid coastal retreat is common and low barrier islands and beaches are constantly changing due to the influence of permafrost, ice-push, waves, and currents. Coastal processes are presently a balance between the influence of ice and the action of waves and currents. Quantitative values for processes are poorly known, however our qualitative understanding is nearly complete. Climatic warming and rising sea levels would decrease the temporal and aerial extent of coastal ice thereby expanding the role of waves and currents. As a result, shoreline retreat rates would increase, producing a transgressive erosional surface on the low coastal plain. With increased wave activity, beaches and barrier islands presently nourished by ice push processes would decay and disappear. Increased sediment supply from a deeply thawed, active layer would release more sediments to rivers and coasts. Additional research should be focused on permafrost and sea ice processes active during freeze up and breakup; the two seasons of most vigorous activity and change.

Alpha-ketoglutarate enhances freeze-thaw tolerance and prevents carbohydrate-induced cell death of the yeast Saccharomyces cerevisiae.

PubMed

Bayliak, Maria M; Hrynkiv, Olha V; Knyhynytska, Roksolana V; Lushchak, Volodymyr I

2018-01-01

Stress resistance and fermentative capability are important quality characteristics of baker's yeast. In the present study, we examined protective effects of exogenous alpha-ketoglutarate (AKG), an intermediate of the tricarboxylic acid cycle and amino acid metabolism, against freeze-thaw and carbohydrate-induced stresses in the yeast Saccharomyces cerevisiae. Growth on AKG-supplemented medium prevented a loss of viability and improved fermentative capacity of yeast cells after freeze-thaw treatment. The cells grown in the presence of AKG had higher levels of amino acids (e.g., proline), higher metabolic activity and total antioxidant capacity, and higher activities of catalase, NADP-dependent glutamate dehydrogenase and glutamine synthase compared to control ones. Both synthesis of amino acids and enhancement of antioxidant system capacity could be involved in AKG-improved freeze-thaw tolerance in S. cerevisiae. Cell viability dramatically decreased under incubation of stationary-phase yeast cells in 2% glucose or fructose solutions (in the absence of the other nutrients) as compared with incubation in distilled water or in 10 mM AKG solution. The decrease in cell viability was accompanied by acidification of the medium, and decrease in cellular respiration, aconitase activity, and levels of total protein and free amino acids. The supplementation with 10 mM AKG effectively prevented carbohydrate-induced yeast death. Protective mechanisms of AKG could be associated with the intensification of respiration and prevention of decreasing protein level as well as with direct antioxidant AKG action.

Monitoring the Dynamics of Water Flow at a High-Mountain Permafrost Site Using Electrical Self-Potential Measurements

NASA Astrophysics Data System (ADS)

Kemna, A.; Weigand, M.; Wagner, F.; Hilbich, C.; Hauck, C.

2016-12-01

Flow of (liquid) water plays a crucial role in the dynamics of coupled thermo-hydro-mechanical processes in terrestrial permafrost systems. To better understand these processes in the active layer of permafrost regions, with the ultimate goal of adequately incorporating them in numerical models for improved scenario prediction, monitoring approaches offering high spatial and temporal resolution, areal coverage, and especially sensitivity to subsurface water flow, are highly desired. This particularly holds for high-mountain slopes, where strong variability in topography, precipitation, and snow cover, along with significant subsurface soil/rock heterogeneity, gives rise to complex spatio-temporal patterns of water flow during seasonal thawing and freezing periods. The electrical self-potential (SP) method is well known to, in theory, meeting the above monitoring demands by measuring the electrical streaming potential which is generated at the microscopic scale when water flows along electrically non-neutral interfaces. Despite its inherent sensitivity to subsurface water flow, the SP method has not yet been used for the monitoring of high-mountain permafrost sites. We here present first results from an SP monitoring survey conducted at the Schilthorn (2970 m asl) in the Bernese Alps, Switzerland, where SP data have been collected since September 2013 at a sampling rate of 10 min on a permanently installed array of 12 non-polarizing electrodes covering an area of 35 m by 15 m. While the SP time series exhibit systematic daily variations, with part of the signal clearly correlated with temperature, in particular in the snow-free periods, the largest temporal changes in the SP signal occur in spring, when the snow cover melts and thawing sets on in the active layer. The period of higher temporal SP variations continues until autumn, when the signal gradually returns to relatively low variations, coinciding with the freezing of the ground. Our results suggest that the SP method is a suitable tool for the monitoring of seasonal water flow dynamics at high-mountain permafrost sites. Current work is directed towards an improved field setup, as well as the quantitative analysis of the SP data based on laboratory calibration measurements.

Carbon Fluxes in a sub-arctic tundra undergoing permafrost degradation

NASA Astrophysics Data System (ADS)

Bracho, R. G.; Webb, E.; Mauritz, M.; Schuur, E. A. G.

2014-12-01

As an effect of climate change, temperatures in high latitude regions are increasing faster than in the rest of the world and future projections indicate it will increase between 7°C and 8°C by the end of the 21st century. Permafrost soils store around 1700 Pg of Carbon (C), which is approximately the amount of C stored in terrestrial vegetation and in the atmosphere combined. Sustained warming induces permafrost thaw, leads to a thicker seasonal active layer, and creates subsided patches in the landscape. Carbon that was previously inaccessible to decomposition is thus exposed, increasing the likelihood of positive feedback of CO2 to the atmosphere. We measured C fluxes (Net ecosystem carbon flux, NEE, and Ecosystem respiration, Re) using the eddy covariance approach in a tundra landscape (Eight Mile Lake Watershed, Alaska) undergoing permafrost degradation from the beginning of the growing season in 2008 and throughout most winters until May 2014. This interval encompassed a range of climatic variability that included a deviation of ± 50% from the long term average in growing season precipitation. Active layer depth (thaw depth at the end of the growing season) and subsidence in the footprint were used as indicators of permafrost degradation. Results indicate that annual NEE ranged from a sink of 0.76 MgC ha-1 yr-1 to a source of 0.55 MgC ha-1 yr-1. NEE during the growing seasons fluctuated from 1.1 to 1.8 MgC ha-1 season-1 in net C uptake. Annual NEE was strongly affected by winter Re, which represented between 33% and 45% of the annual value regardless of of the large drop in both air and soil temperature. Parameters from the light response curve (optimum NEE, NEEopt and quantum yield, α) showed a seasonal and interannual variability and were different between the most and least degraded sites in the footprint, which affected the magnitude of the carbon cycle and may have implications for landscape C balance in sub-arctic tundra.

Progress in studies on hydrological impacts of degrading permafrost in the Source Area of Yellow River on NE Qinghai-Tibet Plateau, SW China

NASA Astrophysics Data System (ADS)

Jin, H.; Ma, Q.; Jin, X.

2017-12-01

Permafrost degradation substantially impacts hydrological processes in the Source Area of the Yellow River (SAYR). Deepening active layer has directly led to a reduction of surface runoffs, alters the generation and dynamics of slope runoffs and groundwater, leading to a deepening of groundwater flow paths. At present, however, there is only a limited understanding of the hydrological impact mechanisms of degrading permafrost. On the basis of analyzing and evaluating the current states, changing history and developing trends of climate, permafrost and hydrological processes, this program aims at further and better quantifying the nature of these mechanisms linking the degrading permafrost with changing hydrological processes. The key scientific themes for this research are the characterization of interactions between ground freezing-thawing and hydrogeology in the SAYR. For this study, a coupling is made between geothermal states and the occurrences of taliks in river systems, in order to understand how expanding taliks control groundwater and surface-water interactions and how these interactions might intensify or weaken when the climate warms and dries persistently. Numerical models include freeze-thaw dynamics coupled to groundwater and surface flow processes. For the proper parameterization of these models, field and laboratory studies are conducted with a focus on the SAYR. Geophysical investigations are employed for mapping permafrost distribution in relation to landscape elements. Boreholes and water wells and observation sites for the hydrothermal processes and water tables are used for establishing the current thermal state of frozen ground and talik and monitor their changes over time, and serve to ground-truth surface geophysical observations. Boreholes and wellbores, water wells and active layer sites have provided access to the permafrost and aquifer systems, allowing the dating of ground-water and -ice and soil strata for elucidating the regional hydrogeological system underlying the SAYR, and groundwater recharge mechanisms. The project plans to quantitatively study the impacting mechanisms of degrading frozen ground on changes in hydrological processes and systems in the SAYR.

Influence of increasing active-layer depth and continued permafrost degradation on carbon, water and energy fluxes over two forested permafrost landscapes in the Taiga Plains, NWT, Canada

NASA Astrophysics Data System (ADS)

Sonnentag, O.; Baltzer, J.; Chasmer, L. E.; Detto, M.; Marsh, P.; Quinton, W. L.

2012-12-01

Recent research suggests an increase in active-layer depth (ALD) in the continuous permafrost zone and degradation of the discontinuous permafrost zone into seasonally frozen. Increasing ALD and continued permafrost degradation will have far-reaching consequences for northern ecosystems including altered regional hydrology and the exposure of additional soil organic carbon (C) to microbial decomposition. These changes might cause positive or negative net feedbacks to the climate system by altering important land surface properties and/or by releasing stored soil organic C to the atmosphere as CO2 and/or CH4. Knowledge gaps exist regarding the links between increasing ALD and/or permafrost degradation, regional hydrology, vegetation composition and structure, land surface properties, and CO2 and CH4 sink-source strengths. The goal of our interdisciplinary project is to shed light on these links by providing a mechanistic understanding of permafrost-thawing consequences for hydrological, ecophysiological and biogeochemical processes at two forested permafrost landscapes in the Taiga Plains, NWT, Canada: Scotty Creek and Havikpak Creek in the discontinuous and in the continuous permafrost zones, respectively (Fig.). The sites will be equipped with identical sets of instrumentation (start: 2013), to measure landscape-scale net exchanges of CO2, CH4, water and energy with the eddy covariance technique. These measurements will be complemented by repeated surveys of surface and frost table topography and vegetation, by land cover-type specific fluxes of CO2 and CH4 measured with a static chamber technique, and by remote sensing-based footprint analysis. With this research we will address the following questions: What is the net effect of permafrost thawing-induced biophysical and biogeochemical feedbacks to the climate system? How do these two different types of feedback differ between the discontinuous and continuous permafrost zones? Is the decrease (increase) in net CO2 (CH4) exchange measured over mostly tundra sites in the continuous permafrost zone generalizable to forested landscapes in both the discontinuous and continuous permafrost zones? With this contribution, we report on the project status, present its objectives and hypotheses, and outline its timeline and sampling design.

Retrogressive thaw slumps temper dissolved organic carbon delivery to streams of the Peel Plateau, NWT, Canada

NASA Astrophysics Data System (ADS)

Littlefair, Cara A.; Tank, Suzanne E.; Kokelj, Steven V.

2017-12-01

In Siberia and Alaska, permafrost thaw has been associated with significant increases in the delivery of dissolved organic carbon (DOC) to recipient stream ecosystems. Here, we examine the effect of retrogressive thaw slumps (RTSs) on DOC concentration and transport, using data from eight RTS features on the Peel Plateau, NWT, Canada. Like extensive regions of northwestern Canada, the Peel Plateau is comprised of thick, ice-rich tills that were deposited at the margins of the Laurentide Ice Sheet. RTS features are now widespread in this region, with headwall exposures up to 30 m high and total disturbed areas often exceeding 20 ha. We find that intensive slumping on the Peel Plateau is universally associated with decreasing DOC concentrations downstream of slumps, even though the composition of slump-derived dissolved organic matter (DOM; assessed using specific UV absorbance and slope ratios) is similar to permafrost-derived DOM from other regions. Comparisons of upstream and downstream DOC flux relative to fluxes of total suspended solids suggest that the substantial fine-grained sediments released by RTS features may sequester DOC. Runoff obtained directly from slump rill water, above entry into recipient streams, indicates that the deepest RTS features, which thaw the greatest extent of buried, Pleistocene-aged glacial tills, release low-concentration DOC when compared to paired upstream, undisturbed locations, while shallower features, with exposures that are more limited to a relict Holocene active layer, have within-slump DOC concentrations more similar to upstream sites. Finally, fine-scale work at a single RTS site indicates that temperature and precipitation serve as primary environmental controls on above-slump and below-slump DOC flux, but it also shows that the relationship between climatic parameters and DOC flux is complex for these dynamic thermokarst features. These results demonstrate that we should expect clear variation in thermokarst-associated DOC mobilization across Arctic regions. However, they also show that within-region variation in thermokarst intensity and landscape composition is critical for determining the biogeochemical response. Geological and climate legacy shape the physical and chemical composition of permafrost and thermokarst potential. As such, these factors must be considered in predictions of land-to-water carbon mobilization in a warming Arctic.

Effect of dilution in sperm maturation media and time of storage on sperm motility and fertilizing capacity of cryopreserved semen of sex-reversed female rainbow trout.

PubMed

Judycka, Sylwia; Ciereszko, Andrzej; Dobosz, Stefan; Zalewski, Tomasz; Dietrich, Grzegorz J

2017-05-01

Masculinized females, also called neomales or sex-reversed females have a male phenotype but retain the female genotype (XX). Therefore, all spermatozoa produced in their functional testes carry an X chromosome, which is desired for the production of all-female rainbow trout populations. Semen of sex-reversed female rainbow trout is of low quality and in vitro maturation is required, which includes dilution of sperm suspensions with specially formulated maturation solutions. The aim of this study was to determine the effect of dilution in different maturation media on sperm quality (sperm motility characteristics and fertilizing capacity) of frozen/thawed sperm of sex-reversed female rainbow trout. The effect of time of post-thaw storage (0, 15, 60 and 120min) on semen quality was also tested. Sperm motility parameters and fertilization rate at the eyed and hatching stages were assessed for post-thaw semen diluted in different media. The cryopreservation procedure resulted in high post-thaw sperm motility of about 57% and did not differ from fresh semen. Unexpectedly, maturation media decreased sperm activation capacity immediately after dilution; however, sperm motility increased over time. Fertilization rates of frozen/thawed semen were high (71-87%) and did not differ significantly between experimental variants at any of tested periods of storage. Our results demonstrated that the effect of the maturation media on frozen/thawed sperm is different from that of fresh sperm. The progressive increase in post-thaw sperm motility in maturation media can potentially be applied to routine hatchery practice. Copyright © 2016 Elsevier Inc. All rights reserved.

Constraining seasonal active layer dynamics and chemical weathering reactions occurring in North Slope Alaskan watersheds with major ion and isotope (δ34SSO4, δ13CDIC, 87Sr/86Sr, δ44/40Ca, and δ44/42Ca) measurements

NASA Astrophysics Data System (ADS)

Lehn, Gregory O.; Jacobson, A. D.; Douglas, T. A.; McClelland, J. W.; Barker, A. J.; Khosh, M. S.

2017-11-01

Rising air temperatures in the Arctic may destabilize a large pool of organic carbon stored in permafrost, thereby causing a positive feedback to global climate warming. Permafrost thaw could also deepen hydrologic flow paths and expose previously frozen rock and mineral fragments to chemical weathering. Future shifts in the inorganic solute geochemistry of Arctic rivers may signal changes in soil processes that also affect organic carbon storage. Tracing permafrost thaw with dissolved riverine loads requires understanding the spatial and seasonal variation of chemical weathering reactions and other biogeochemical phenomena that affect elemental mass-transport. To help identify connections between mineral weathering and active layer processes, we studied the major ion and isotope (δ34SSO4, δ13CDIC, 87Sr/86Sr, δ44/40Ca, and δ44/42Ca) geochemistry of five streams draining the North Slope of Alaska. Continuous permafrost underlies all streams, but the Atigun River, Roche Moutonnée Creek, and Trevor Creek primarily drain bare bedrock outcrops in the Brooks Range, while the Upper Kuparuk River and Imnavait Creek primarily drain tundra. In total, we collected 546 water samples spanning the spring freshet through fall freeze-up in 2009 and 2010. We also analyzed snow, rock, sediment, soil, and plant samples. Major ion ratios and δ13CDIC values point to the overall dominance of carbonate weathering by carbonic and sulfuric acids, with additional influences from atmospheric deposition, plant decay, sulfate salt dissolution, and silicate weathering by carbonic acid. δ13CDIC values may also reflect partial equilibration with soil and atmospheric CO2. All streams display large seasonal variations in major ion ratios and δ13CDIC values that are consistent with progressive deepening of the seasonally thawed zone over the summer. In the mountain watersheds, carbonate weathering dominates during the spring and summer, while sulfate salt (primarily CaSO4 and MgSO4) dissolution dominates during the fall. Riverine δ34SSO4 values reveal that the sulfate salts are secondary precipitates. We propose a conceptual model where cryoconcentration in soils during the late fall and winter causes secondary mineral formation at depth and re-exposure during subsequent thaw seasons produces the observed geochemical signals in rivers. The tundra streams lack definitive evidence for sulfate salt dissolution, presumably because thick peat soils limit the exposure and weathering of underlying glacial sediment where the salts are expected to form and dissolve. Appearance of a sulfate salt dissolution signal in tundra streams may correlate with future permafrost degradation. Carbonate weathering dominates riverine 87Sr/86Sr ratios, but the compositional heterogeneity of bedrock limits interpretation of the data. All rivers have higher δ44/40Ca values compared to bedrock, likely due to plant uptake of lighter Ca isotopes. In the tundra watersheds, freshet δ44/40Ca values were 0.10-0.20‰ lower than summer and fall values. These trends likely reflect contributions from plant decay, as comparison between δ44/40Ca and δ44/42Ca values suggests that all isotopic variation is mass-dependent with minimal radiogenic 40Ca inputs from the weathering of old silicate minerals with high K/Ca ratios.

Diversity and potential activity of methanotrophs in high methane-emitting permafrost thaw ponds

PubMed Central

Vincent, Warwick F.; Comte, Jérôme; Matveev, Alex; Lovejoy, Connie

2017-01-01

Lakes and ponds derived from thawing permafrost are strong emitters of carbon dioxide and methane to the atmosphere, but little is known about the methane oxidation processes in these waters. Here we investigated the distribution and potential activity of aerobic methanotrophic bacteria in thaw ponds in two types of eroding permafrost landscapes in subarctic Québec: peatlands and mineral soils. We hypothesized that methanotrophic community composition and potential activity differ regionally as a function of the landscape type and permafrost degradation stage, and locally as a function of depth-dependent oxygen conditions. Our analysis of pmoA transcripts by Illumina amplicon sequencing and quantitative PCR showed that the communities were composed of diverse and potentially active lineages. Type I methanotrophs, particularly Methylobacter, dominated all communities, however there was a clear taxonomic separation between the two landscape types, consistent with environmental control of community structure. In contrast, methanotrophic potential activity, measured by pmoA transcript concentrations, did not vary with landscape type, but correlated with conductivity, phosphorus and total suspended solids. Methanotrophic potential activity was also detected in low-oxygen bottom waters, where it was inversely correlated with methane concentrations, suggesting methane depletion by methanotrophs. Methanotrophs were present and potentially active throughout the water column regardless of oxygen concentration, and may therefore be resilient to future mixing and oxygenation regimes in the warming subarctic. PMID:29182670

Diversity and potential activity of methanotrophs in high methane-emitting permafrost thaw ponds.

PubMed

Crevecoeur, Sophie; Vincent, Warwick F; Comte, Jérôme; Matveev, Alex; Lovejoy, Connie

2017-01-01

Lakes and ponds derived from thawing permafrost are strong emitters of carbon dioxide and methane to the atmosphere, but little is known about the methane oxidation processes in these waters. Here we investigated the distribution and potential activity of aerobic methanotrophic bacteria in thaw ponds in two types of eroding permafrost landscapes in subarctic Québec: peatlands and mineral soils. We hypothesized that methanotrophic community composition and potential activity differ regionally as a function of the landscape type and permafrost degradation stage, and locally as a function of depth-dependent oxygen conditions. Our analysis of pmoA transcripts by Illumina amplicon sequencing and quantitative PCR showed that the communities were composed of diverse and potentially active lineages. Type I methanotrophs, particularly Methylobacter, dominated all communities, however there was a clear taxonomic separation between the two landscape types, consistent with environmental control of community structure. In contrast, methanotrophic potential activity, measured by pmoA transcript concentrations, did not vary with landscape type, but correlated with conductivity, phosphorus and total suspended solids. Methanotrophic potential activity was also detected in low-oxygen bottom waters, where it was inversely correlated with methane concentrations, suggesting methane depletion by methanotrophs. Methanotrophs were present and potentially active throughout the water column regardless of oxygen concentration, and may therefore be resilient to future mixing and oxygenation regimes in the warming subarctic.

Unraveling of permafrost hydrological variabilities on Central Qinghai-Tibet Plateau using stable isotopic technique.

PubMed

Yang, Yuzhong; Wu, Qingbai; Hou, Yandong; Zhang, Zhongqiong; Zhan, Jing; Gao, Siru; Jin, Huijun

2017-12-15

Permafrost degradation on the Qinghai-Tibet Plateau (QTP) will substantially alter the surface runoff discharge and generation, which changes the recharge processes and influences the hydrological cycle on the QTP. Hydrological connections between different water bodies and the influence of thawing permafrost (ground ice) are not well understood on the QTP. This study applied water stable isotopic method to investigate the permafrost hydrological variabilities in Beiluhe Basin (BLB) on Central QTP. Isotopic variations of precipitation, river flow, thermokarst lake, and near-surface ground ice were identified to figure out the moisture source of them, and to elaborate the hydrological connections in permafrost region. Results suggested that isotopic seasonalities in precipitation is evident, it is showing more positive values in summer seasons, and negative values in winter seasons. Stable isotopes of river flow are mainly distributed in the range of precipitation which is indicative of important replenishment from precipitation. δ 18 O, δD of thermokarst lakes are more positive than precipitation, indicating of basin-scale evaporation of lake water. Comparison of δ I values in different water bodies shows that hydrology of thermokarst lakes was related to thawing of permafrost (ground ice) and precipitation. Near-surface ground ice in BLB exhibits different isotopic characteristics, and generates a special δD-δ 18 O relationship (freezing line): δD=5.81δ 18 O-23.02, which reflects typical freezing of liquid water. From isotopic analysis, it is inferred that near-surface ground ice was mainly recharged by precipitation and active layer water. Stable isotopic and conceptual model is suggestive of striking hydrological connections between precipitation, river flow, thermokarst lake, and ground ice under degrading permafrost. This research provides fundamental comprehensions into the hydrological processes in permafrost regions on QTP, which should be considered in investigating the influence of thawing permafrost on the hydrological cycle on QTP. Copyright © 2017 Elsevier B.V. All rights reserved.

Permafrost collapse alters soil carbon stocks, respiration, CH4 , and N2O in upland tundra.

PubMed

Abbott, Benjamin W; Jones, Jeremy B

2015-12-01

Release of greenhouse gases from thawing permafrost is potentially the largest terrestrial feedback to climate change and one of the most likely to occur; however, estimates of its strength vary by a factor of thirty. Some of this uncertainty stems from abrupt thaw processes known as thermokarst (permafrost collapse due to ground ice melt), which alter controls on carbon and nitrogen cycling and expose organic matter from meters below the surface. Thermokarst may affect 20-50% of tundra uplands by the end of the century; however, little is known about the effect of different thermokarst morphologies on carbon and nitrogen release. We measured soil organic matter displacement, ecosystem respiration, and soil gas concentrations at 26 upland thermokarst features on the North Slope of Alaska. Features included the three most common upland thermokarst morphologies: active-layer detachment slides, thermo-erosion gullies, and retrogressive thaw slumps. We found that thermokarst morphology interacted with landscape parameters to determine both the initial displacement of organic matter and subsequent carbon and nitrogen cycling. The large proportion of ecosystem carbon exported off-site by slumps and slides resulted in decreased ecosystem respiration postfailure, while gullies removed a smaller portion of ecosystem carbon but strongly increased respiration and N2 O concentration. Elevated N2 O in gully soils persisted through most of the growing season, indicating sustained nitrification and denitrification in disturbed soils, representing a potential noncarbon permafrost climate feedback. While upland thermokarst formation did not substantially alter redox conditions within features, it redistributed organic matter into both oxic and anoxic environments. Across morphologies, residual organic matter cover, and predisturbance respiration explained 83% of the variation in respiration response. Consistent differences between upland thermokarst types may contribute to the incorporation of this nonlinear process into projections of carbon and nitrogen release from degrading permafrost. © 2015 John Wiley & Sons Ltd.

Laponite crosslinked starch/polyvinyl alcohol hydrogels by freezing/thawing process and studying their cadmium ion absorption.

PubMed

Yu, Chen; Tang, Xiaozhi; Liu, Shaowei; Yang, Yuling; Shen, Xinchun; Gao, Chengcheng

2018-05-22

In this study, Laponite RD (LRD) cross-linked hydrogels consisting of starch, polyvinyl alcohol (PVA) were prepared by freezing/thawing process and the influence of LRD content on structure and properties of hydrogels was investigated. FTIR showed a new structure of hydrogen bonding might result from cross-linking reactions between LRD and polymers. X-ray diffraction (XRD) analysis showed that high degree of exfoliation of LRD clay layers had occurred during the preparation of hydrogels. The synergistic effect of physical cross-linking by freeze/thaw cycles and by LRD led to more porous, uniform and stable network, which was shown in SEM images. The melting temperature decreased and thermal stability got improved with the increase of LRD content. Reswelling ratios of hydrogels had the highest value when LRD content was 10%. Additionally, cadmium ion absorption capacity of the hydrogel was studied and the results showed that increasing the concentration of LRD increased absorption ratio and amount of Cd 2+ ion in the solution. In a word, LRD could be used as a physical crosslinker and reinforced agent for starch-PVA based hydrogels and the formed hydrogels could be used as novel type and high capacity absorbent materials in heavy metal removing processes. Copyright © 2018. Published by Elsevier B.V.

Complete and Partial Photo-oxidation of Dissolved Organic Matter Draining Permafrost Soils.

PubMed

Ward, Collin P; Cory, Rose M

2016-04-05

Photochemical degradation of dissolved organic matter (DOM) to carbon dioxide (CO2) and partially oxidized compounds is an important component of the carbon cycle in the Arctic. Thawing permafrost soils will change the chemical composition of DOM exported to arctic surface waters, but the molecular controls on DOM photodegradation remain poorly understood, making it difficult to predict how inputs of thawing permafrost DOM may alter its photodegradation. To address this knowledge gap, we quantified the susceptibility of DOM draining the shallow organic mat and the deeper permafrost layer of arctic soils to complete and partial photo-oxidation and investigated changes in the chemical composition of each DOM source following sunlight exposure. Permafrost and organic mat DOM had similar lability to photomineralization despite substantial differences in initial chemical composition. Concurrent losses of carboxyl moieties and shifts in chemical composition during photodegradation indicated that photodecarboxylation could account for 40-90% of DOM photomineralized to CO2. Permafrost DOM had a higher susceptibility to partial photo-oxidation compared to organic mat DOM, potentially due to a lower abundance of phenolic moieties with antioxidant properties. These results suggest that photodegradation will likely continue to be an important control on DOM fate in arctic freshwaters as the climate warms and permafrost soils thaw.

Arctic mosses govern below-ground environment and ecosystem processes.

PubMed

Gornall, J L; Jónsdóttir, I S; Woodin, S J; Van der Wal, R

2007-10-01

Mosses dominate many northern ecosystems and their presence is integral to soil thermal and hydrological regimes which, in turn, dictate important ecological processes. Drivers, such as climate change and increasing herbivore pressure, affect the moss layer thus, assessment of the functional role of mosses in determining soil characteristics is essential. Field manipulations conducted in high arctic Spitsbergen (78 degrees N), creating shallow (3 cm), intermediate (6 cm) and deep (12 cm) moss layers over the soil surface, had an immediate impact on soil temperature in terms of both average temperatures and amplitude of fluctuations. In soil under deep moss, temperature was substantially lower and organic layer thaw occurred 4 weeks later than in other treatment plots; the growing season for vascular plants was thereby reduced by 40%. Soil moisture was also reduced under deep moss, reflecting the influence of local heterogeneity in moss depth, over and above the landscape-scale topographic control of soil moisture. Data from field and laboratory experiments show that moss-mediated effects on the soil environment influenced microbial biomass and activity, resulting in warmer and wetter soil under thinner moss layers containing more plant-available nitrogen. In arctic ecosystems, which are limited by soil temperature, growing season length and nutrient availability, spatial and temporal variation in the depth of the moss layer has significant repercussions for ecosystem function. Evidence from our mesic tundra site shows that any disturbance causing reduction in the depth of the moss layer will alleviate temperature and moisture constraints and therefore profoundly influence a wide range of ecosystem processes, including nutrient cycling and energy transfer.

Cryolithozone of Western Arctic shelf of Russia

NASA Astrophysics Data System (ADS)

Kholmyanskii, Mikhail; Vladimirov, Maksim; Snopova, Ekaterina; Kartashev, Aleksandr

2017-04-01

We propose a new original version of the structure of the cryolithozone of west Arctic seas of Russia. In contrast to variants of construction of sections and maps based on thermodynamic modeling, the authors have used electrometric, seismic, and thermal data including their own profile measurements by near-field transient electromagnetic technique and seismic profile observations by reflection method. As a result, we defined the spatial characteristics of cryolithozone and managed to differentiate it to several layers, different both in structure and formation time. We confirmed once again that the spatial boundary of cryolithozone, type and thickness of permafrost, chilled rocks and thawed ground are primarily determined by tectonic and oceanographic regimes of the Arctic Ocean and adjacent land in different geological epochs. Permafrost formed on the land in times of cold weather, turn to submarine during flooding and overlap, in the case of the sea transgression, by marine sediments accumulating in the period of warming. We have been able to establish a clear link between the permafrost thickness and the geomorphological structure of the area. This can be explained by the distribution of thermodynamic flows that change the temperature state of previously formed permafrost rocks. Formation in the outer parts of the shelf which took place at ancient conversion stage can be characterized by the structure: • permafrost table - consists of rocks, where the sea water with a temperature below 0 °C has replaced the melted ice; • middle horizon - composed of undisturbed rocks, and the rocks chilled through the lower sieving underlay; As a result of the interpretation and analysis of all the available data, the authors created a map of types of cryolithozone of the Western Arctic shelf of Russia. The following distribution areas are marked on the map: • single-layer cryolithozone (composed of sediments upper Pleistocene and Holocene); • monosyllabic relict permafrost; • two-layer relict permafrost; • three-layered cryolithozone (composed of Holocene rocks and two-layer relict mainly from permafrost rocks); • three-layer cryolithozone (composed of Holocene rocks and two-layer relict mainly from chilled rocks); • post-cryogenic thawed sediments.

Effects of Freeze-Thawing and Intravenous Infusion on Mesenchymal Stromal Cell Gene Expression.

PubMed

Hoogduijn, Martin J; de Witte, Samantha F H; Luk, Franka; van den Hout-van Vroonhoven, Mirjam C G N; Ignatowicz, Lech; Catar, Rusan; Strini, Tanja; Korevaar, Sander S; van IJcken, Wilfred F J; Betjes, Michiel G H; Franquesa, Marcella; Moll, Guido; Baan, Carla C

2016-04-15

Mesenchymal stromal cells (MSC) are increasingly used as an investigative therapeutic product for immune disorders and degenerative disease. Typically, MSC are isolated from human tissue, expanded in culture, and cryopreserved until usage. The safety and efficacy of MSC therapy will depend on the phenotypical and functional characteristics of MSC. The freeze-thawing procedure may change these characteristics. Furthermore, the cells encounter a microenvironment after administration that may impact their properties. It has been demonstrated that the majority of MSC localize to the lungs after intravenous infusion, making this the site to study the effects of the in vivo milieu on administered MSC. In this study, we investigated the effect of freeze-thawing and the mouse lung microenvironment on human adipose tissue-derived MSC. There were effects of freeze-thawing on the whole genome expression profile of MSC, although the effects did not exceed interdonor differences. There were no major changes in the expression of hemostatic regulators on transcriptional level, but significantly increased expression of procoagulant tissue factor on the surface of thawed adipose MSC, correlating with increased procoagulant activity of thawed cells. Exposure for 2 h to the lung microenvironment had a major effect on MSC gene expression and affected several immunological pathways. This indicates that MSC undergo functional changes shortly after infusion and this may influence the efficacy of MSC to modulate inflammatory responses. The results of this study demonstrate that MSC rapidly alter in response to the local milieu and disease-specific conditions may shape MSC after administration.

An investigation into the preservation of microbial cell banks for α-amylase production during 5 l fed-batch Bacillus licheniformis fermentations.

PubMed

Hancocks, Nichola H; Thomas, Colin R; Stocks, Stuart M; Hewitt, Christopher J

2010-10-01

Fluorescent staining techniques were used for a systematic examination of methods used to cryopreserve microbial cell banks. The aim of cryopreservation here is to ensure subsequent reproducible fermentation performance rather than just post thaw viability. Bacillus licheniformis cell physiology post-thaw is dependent on the cryopreservant (either Tween 80, glycerol or dimethyl sulphoxide) and whilst this had a profound effect on the length of the lag phase, during subsequent 5 l fed-batch fermentations, it had little effect on maximum specific growth rate, final biomass concentration or α-amylase activity. Tween 80 not only protected the cells during freezing but also helped them recover post-thaw resulting in shorter process times.

Oxidative stress at different stages of two-step semen cryopreservation procedures in dogs.

PubMed

Lucio, C F; Regazzi, F M; Silva, L C G; Angrimani, D S R; Nichi, M; Vannucchi, C I

2016-06-01

Sperm cryopreservation generates sperm damage and reduced fertilization capacity as a consequence of reactive oxygen species formation. Identifying the critical points of the process will contribute to the development of strategies for oxidative stress prevention. Therefore, the aim of this experiment was to verify the occurrence of oxidative stress during the two-step cryopreservation process in dogs. Six healthy mature dogs were used and submitted to the two-step sperm cryopreservation protocol. The sperm analysis was done at three time points: after refrigeration, after glycerolization, and after thawing by sperm motility, measurement of spontaneous and induced oxidative stress, sperm mitochondrial activity, plasma membrane integrity, flow cytometric evaluation of plasma and acrosome membrane integrity, mitochondrial membrane potential, and sperm chromatin structure assay. There was an increase in free radical production after glycerolization (87.4 ± 15.5 ng/mL of spontaneous thiobarbituric acid reactive substances (TBARS) after refrigeration and 1226.3 ± 256.0 ng/mL after glycerolization; P < 0.05), in association with loss of sperm mitochondrial activity. However, frozen-thawed samples had lower sperm motility, lower resistance to oxidative stress (448.7 ± 23.6 ng/mL of induced TBARS after glycerolization and 609.4 ± 35.9 ng/mL after thawing; P < 0.05) and increased lipid peroxidation (4815.2 ± 335.4 ng/mL of spontaneous TBARS after thawing; P < 0.05) as well as increased damage to plasma and acrosomal membranes, compared with refrigeration and glycerolization. In conclusion, the production of free radicals by sperm cells begins during glycerolization. However, sperm oxidative damage intensifies after thawing. Despite intracellular ice formation during cryopreservation, the increased production of reactive oxygen species can be the explanation of the decrease in sperm motility, reduced mitochondrial activity, and sperm plasma membrane and acrosomal damage. Copyright © 2016 Elsevier Inc. All rights reserved.

Assessing slope dynamics in a climate-sensitive high arctic region with Sentinel-1 dataset

NASA Astrophysics Data System (ADS)

Mantovani, Matteo; Pasuto, Alessandro; Soldati, Mauro; Popovic, Radmil; Berthling, Ivar

2017-04-01

As witnessed by an increasing number of studies, the evidence of ongoing climate change and its geomorphological effects is unquestionable. In the Svalbard archipelago, the Arctic amplification of global warming trends currently has a significant effect on permafrost temperatures and active layer thickness. Combined with altered intensity and variability of precipitation, slopes are likely to become more active in terms of both rapid and slow (creep) processes - at least as a temporary effect where the ice-rich transient layer of soils or jointed permafrost rock walls are starting to thaw. The slopes of the Kongsfjorden area aroundNy-Ålesund, NW Spitzbergen comprise a variable set of slopes systems on which to evaluate current modifications of slope sediment transfer; from low-angle fined-grained vegetated slopes to steep rock walls, talus slopes and rock glaciers. In addition, systems influenced by currently retreating glaciers and thermokarst processes are also found, in some settings interfering with the rock wall and talus slope systems. Within the framework of the SLOPES project, we provide baseline data on slope geometry from detailed terrestrial laser scanning and drone aerial image acquisition. Further, in order to document current dynamics, we employ interferometric analysis of data gathered by the new ESA mission SENTINEL. This presentation will report on data from the interferometric analysis.

Robotic Follow-up for Human Exploration

DTIC Science & Technology

2010-09-01

layering, structural anomalies and fracturing . While ground ice at Haughton is generally present as continuous permafrost, the depth to the thaw zone...geologist (M. Helper) and a geophysicist (E. Heggy) planned tra- verses using a HMMWV as a simulated pressur - ized crew rover. Each traverse was...mounted on the front of a simulated pressurized crew rover; right, GPR is manually deployed by suited crew. Table 3. Flight rules for simulated crew mission

Could cryopreserved human semen samples be stored at -80°C?

PubMed

Vaz, Carlos R; Lamim, Tamara; Salvador, Rafael A; Batschauer, Anna P B; Amaral, Vera Lucia L; Til, David

2018-06-01

To evaluate storage time effects in cryopreserved human semen samples, kept in the freezer at a controlled temperature of -80°C, on sperm viability after thawing. We used 20 semen samples. Each sample was cryopreserved in 10 fingers, which were divided into five groups: one group was kept in cryogenic canisters throughout the experiment(control), and four groups were kept in a VIP Ultra Low MDF-U76V- PE freezer, with the temperature set at -80°C, for 24, 48, 72 and 96 hours, respectively. After the exposure time, the samples were stored in cryogenic canisters after being thawed. The analyzed parameters were: motility, vitality and mitochondrial activity. After thawing, we noticed decreased sperm motility, vitality and mitochondrial activity, when comparing the tested groups with the control group, as well as a progressive reduction in the analyzed parameters between the times evaluated. Cryopreservation of semen samples at -80°C is potentially harmful to sperm viability, causing damage when submitted to longer exposure times.

Possible slow periglacial mass wasting at the Southern Hemisphere on Mars.

NASA Astrophysics Data System (ADS)

Johnsson, Andreas; Reiss, Dennis; Hauber, Ernst; Hiesinger, Harald

2014-05-01

Small-scale lobate landforms which are strikingly similar to terrestrial solifluction lobes are cataloged at the Southern Hemisphere on Mars. Terrestrial periglacial solifluction lobes are formed by frost creep, a combination of repeated frost heave and thaw consolidation, and gelifluction (visco-plastic deformation of near saturated soil) in the active layer on top of the permafrost table (e.g., Matsuoka, 2001). All publically available HiRISE images between latitudes 40°S and 80°S on Mars are being used in this study. Compared to previous studies of small-scale lobes in the northern mid and high latitudes (e.g., Gallagher et al., 2011; Johnsson et al., 2012; Barrett et al., 2013), these landforms also occur, in most cases, in close spatial proximity to fluvial gullies and polygonal terrain. This study aims to investigate whether the southern small-scale lobes differ from the northern counterparts in terms of morphology and distribution. Furthermore, spatio-temporal relationships to landforms with ground-ice affinity, such as gullies and polygonal terrain, are investigated. Solifluction-like small-scale lobes have been studied in detail at the northern hemisphere on Mars (Gallagher et al., 2011), where they are widely distributed at high latitudes between 59°N and 80°N (Johnsson et al., 2012). Small-scale lobes are proposed to represent freeze-thaw activity late in Martian climate history (Gallagher et al., 2011; Balme and Gallagher, 2011; Johnsson et al, 2012; Balme et al., 2013). Small-scale lobes differ from permafrost creep (i.e. rock glaciers) in having low fronts, decimeters to less than <5 m meters in height. They also lack compression ridges and furrows and are not confined to topographic niches (i.e. valley confinement). The presence of small-scale lobes raises the question whether they have formed by a warmer-than-thought-climate, or by the influence of soil salts (i.e. perchlorates) under sub-freezing conditions (e.g., Gallagher et al., 2011). Preliminary results indicate that the small-scale lobes are distributed more equatorward than in the north. Morphometry and morphology suggest that they are distinct from permafrost creep. Even though the southern hemisphere have more impact crater slopes fewer lobes have been observed so far in this study. The project is on-going and more work is required to firmly establish their distribution and their association to gullies and polygonal terrain. Though landforms indicative of freeze-thaw activity may be rare on flat terrain on Mars, there is growing evidence that freeze-thaw conditions may have been met on mid and high latitude slopes in recent climate history on Mars. References: Matsuoka, 2001. Earth Sci. Rev. Gallagher et al., 2011. Icarus 211, Balme and Gallagher, 2011. GSL. Johnsson et al., 2012. Icarus 218, Balme et al., 2013. Prog. Phys. Geogr. 1-36. Barrett et al., 2013. EPSC2013-159.

The post-thaw irradiation of avian spermatozoa with He-Ne laser differently affects chicken, pheasant and turkey sperm quality.

PubMed

Iaffaldano, N; Paventi, G; Pizzuto, R; Passarella, S; Cerolini, S; Zaniboni, L; Marzoni, M; Castillo, A; Rosato, M P

2013-11-30

The effects of post-thaw Helium-Neon (He-Ne) laser irradiation on mobility and functional integrity of frozen/thawed chicken, pheasant and turkey spermatozoa were investigated. Cytochrome C oxidase (COX) activity was also determined as a measure of the effect of irradiation on mitochondrial bioenergetics. Semen samples from each species were collected, processed and frozen according to the pellet procedure. After thawing, each semen sample was divided into two subsamples: the first one was the control; the second one was irradiated with a single mode continuous He-Ne laser wave (wavelength 632.8 nm; 6 mW; 3.96 J/cm(2)). Then the samples were assessed for sperm mobility (Accudenz(®) swim-down test), viability (SYBR-14/PI staining), osmotic-resistance (HOS test) and COX activity. The irradiation was effective P<0.05 increasing sperm motility in the turkey semen (0.228 ± 0.01 compared with 0.294 ± 0.02). The irradiation also caused an increase (P<0.05) of the COX activity in pheasant (+135 ± 4%) and turkey (+116 ± 4%) sperm, without affecting viability and osmotic-resistance. The COX was positively correlated (P<0.05) with the viability of chicken sperm, however no significant interactions were found between mobility and COX activity in the three avian species. Due to the difference in energetic metabolism among avian species used in this study, the He-Ne laser irradiation has a differential action on bio-stimulation of turkey, chicken and pheasant spermatozoa. The present results are the first to elucidate the possibility for restoration of motility of cryopreserved avian spermatozoa by bio-stimulation provided via He-Ne laser irradiation. Copyright © 2013 Elsevier B.V. All rights reserved.

Freeze and Thaw of CD4+CD25+Foxp3+ Regulatory T Cells Results in Loss of CD62L Expression and a Reduced Capacity to Protect against Graft-versus-Host Disease

PubMed Central

Pierini, Antonio; Baker, Jeanette; Armstrong, Randall; Pan, Yuqiong; Leveson-Gower, Dennis; Negrin, Robert; Meyer, Everett

2015-01-01

The adoptive transfer of CD4+CD25+Foxp3+ regulatory T cells (Tregs) in murine models of allogeneic hematopoietic cell transplantation (HCT) has been shown to protect recipient mice from lethal acute graft-versus-host disease (GVHD) and this approach is being actively investigated in human clinical trials. Here, we examined the effects of cryopreservation on Tregs. We found that freeze and thaw of murine and human Tregs is associated with reduced expression of L-selectin (CD62L), which was previously established to be an important factor that contributes to the in vivo protective effects of Tregs. Frozen and thawed murine Tregs showed a reduced capacity to bind to the CD62L binding partner MADCAM1 in vitro as well as an impaired homing to secondary lymphoid organs in vivo. Upon adoptive transfer frozen and thawed Tregs failed to protect against lethal GVHD compared with fresh Tregs in a murine model of allogeneic HCT across major histocompatibility barriers. In summary, the direct administration of adoptively transferred frozen and thawed Tregs adversely affects their immunosuppressive potential which is an important factor to consider in the clinical implementation of Treg immunotherapies. PMID:26693907

L-Carnitine in rooster semen cryopreservation: Flow cytometric, biochemical and motion findings for frozen-thawed sperm.

PubMed

Fattah, A; Sharafi, M; Masoudi, R; Shahverdi, A; Esmaeili, V; Najafi, A

2017-02-01

Rooster semen cryopreservation is not efficient for artificial insemination in breeder flocks. L-Carnitine (LC) has been evaluated for effectiveness in cryopreservation media on the characteristics of rooster sperm after freeze-thawing. Motility characteristics, membrane functionality, abnormal morphology, apoptotic like changes, mitochondria activity and lipid peroxidation of rooster sperms were assessed after freeze-thawing with different concentrations of LC in Beltsville medium. Semen samples were collected from 12 roosters, twice a week, and diluted in the extenders that contained different concentrations of LC. Supplementation of Beltsevile with 1 and 2 mM LC was found to result in higher total motility (68.2± 1.7% and 69.1± 1.7%, respectively), progressive motility (28.4± 1.6%, 29.8± 1.6%), membrane functionality (76.2± 1.9% and 75.9± 1.9%), viability (58.2 ± 1.1%, 59.1 ± 1.1%) and lower significant of lipid peroxidation (2.53 ± 0.08 nmol/ml, 2.49 ± 0.08 nmol/ml) compared to control group containing no LC. Lower motility, progressive motility, and viability were observed in frozen-thawed sperm in extender containing 8 mM LC (35.8± 1.7%, 9.6± 1.2% and 27.1 ± 1.2%, respectively) compared to control. Morphology and mitochondrial activity were not affected by different concentrations of LC. Our results showed that supplementation of Beltsville extender with 1 and 2 mM LC significantly improved the quality of rooster sperm quality after freeze-thawing. Copyright © 2016 Elsevier Inc. All rights reserved.

Trehalose and glycerol have a dose-dependent synergistic effect on the post-thawing quality of ram semen cryopreserved in a soybean lecithin-based extender.

PubMed

Najafi, Abozar; Zhandi, Mahdi; Towhidi, Armin; Sharafi, Mohsen; Akbari Sharif, Abbas; Khodaei Motlagh, Mahdi; Martinez-Pastor, Felipe

2013-06-01

The objective of this study was to examine the interaction of different concentrations of trehalose [0 (T0), 50 (T50) or 100 (T100) mM] and glycerol [5% (G5) or 7% (G7)] on post-thawed quality of ram semen, cryopreserved in a soybean lecithin (SL)-based extender. Twenty-eight ejaculates were collected from four rams and diluted with six trehalose/glycerol combinations: T0G5, T50G5, T100G5, T0G7, T50G7, and T100G7. Sperm motility (CASA), membrane integrity (eosin/nigrosin) and functionality (HOST), abnormal forms, capacitation status (CTC), mitochondrial activity (rhodamine 123), apoptotic features (Annexin V/propidium iodide) and lipoperoxidation (malondialdehyde production) were evaluated after thawing. Extender T100G5 yielded the highest results for total and progressive motility, sperm velocity, normal morphology, functional membranes, active mitochondria and membrane integrity, with P<0.05 in general, except for T50G7 (P>0.05). The combinations T0G5, T0G7 and T100G7 yielded the lowest post-thaw quality. We could not detect significant changes in other kinematic parameters, capacitation status or lipoperoxidation. We conclude that, in our SL-based extender, a combination of 100 mM trehalose and 5% glycerol was the most adequate combination to achieving post-thawing quality in our soybean lecithin-based extender, and our results support that a synergistic effect among trehalose and glycerol exists. We suggest that other combinations could improve these results. Copyright © 2013 Elsevier Inc. All rights reserved.

Methane production as key to the greenhouse gas budget of thawing permafrost on climate relevant time scales

NASA Astrophysics Data System (ADS)

Knoblauch, C.; Beer, C.; Liebner, S.; Schütt, A.; Grigoriev, M.; Pfeiffer, E. M.

2017-12-01

Permafrost in circum-arctic soils stores as much carbon as the global atmosphere. Permafrost thaw liberates organic matter, which is mineralized by microorganisms to carbon dioxide (CO2) and methane (CH4). The release of these greenhouse gases (GHGs) may form a positive feedback to atmospheric CO2 and CH4 concentrations and accelerate climate change. The microbial formation of CH4, which has 28 to 45 times the global warming potential (GWP) of CO2 (100 years time scale), requires anoxic conditions. Current studies indicate that permafrost thaw at the bottom of well drained (oxic) soils cause a higher formation of GHGs than in water saturated (anoxic) soils since more CO2 is formed under oxic conditions and only small amounts of CH4 are formed from permafrost organic matter under anoxic conditions. Here we show through 7-year laboratory incubations and molecular analysis of Siberian permafrost that low CH4 production from permafrost organic matter is due to the lack of active methanogens. Equal amounts of permafrost organic carbon are mineralized to CO2 and CH4 under anoxic conditions after an active methanogenic community has established. Field measurements demonstrate that recently thawed permafrost organic matter is a substantial source for CH4 if primed with surface soil. An organic carbon decomposition model, calibrated with the collected long-term incubation data, predicts a higher loss of permafrost carbon under oxic conditions but a twice as high production of CO2-C equivalents under anoxic conditions when considering a GWP of 28 for CH4. Combining these model results with observed permafrost carbon profile data, up-scaled carbon stocks and thaw depth projections suggests a global formation of 3 - 10 Pg CO2-C from thawing permafrost in oxic soils compared to 0.2 - 0.6 Pg CO2-C and 0.2- 0.8 Pg CH4-C in anoxic soils until 2100. However, based on CO2-C equivalents the GHG production in anoxic soils (2 - 9 Pg CO2-C equivalents) is similar to those in oxic soils. These findings challenge the view of a stronger permafrost carbon-climate feedback from drained soils and emphasize the importance of CH4 production in thawing permafrost.

Biotic responses buffer warming-induced soil organic carbon loss in Arctic tundra.

PubMed

Liang, Junyi; Xia, Jiangyang; Shi, Zheng; Jiang, Lifen; Ma, Shuang; Lu, Xingjie; Mauritz, Marguerite; Natali, Susan M; Pegoraro, Elaine; Penton, C Ryan; Plaza, César; Salmon, Verity G; Celis, Gerardo; Cole, James R; Konstantinidis, Konstantinos T; Tiedje, James M; Zhou, Jizhong; Schuur, Edward A G; Luo, Yiqi

2018-05-26

Climate warming can result in both abiotic (e.g., permafrost thaw) and biotic (e.g., microbial functional genes) changes in Arctic tundra. Recent research has incorporated dynamic permafrost thaw in Earth system models (ESMs) and indicates that Arctic tundra could be a significant future carbon (C) source due to the enhanced decomposition of thawed deep soil C. However, warming-induced biotic changes may influence biologically related parameters and the consequent projections in ESMs. How model parameters associated with biotic responses will change under warming and to what extent these changes affect projected C budgets have not been carefully examined. In this study, we synthesized six data sets over five years from a soil warming experiment at the Eight Mile Lake, Alaska, into the Terrestrial ECOsystem (TECO) model with a probabilistic inversion approach. The TECO model used multiple soil layers to track dynamics of thawed soil under different treatments. Our results show that warming increased light use efficiency of vegetation photosynthesis but decreased baseline (i.e., environment-corrected) turnover rates of SOC in both the fast and slow pools in comparison with those under control. Moreover, the parameter changes generally amplified over time, suggesting processes of gradual physiological acclimation and functional gene shifts of both plants and microbes. The TECO model predicted that field warming from 2009 to 2013 resulted in cumulative C losses of 224 or 87 g m -2 , respectively, without or with changes in those parameters. Thus, warming-induced parameter changes reduced predicted soil C loss by 61%. Our study suggests that it is critical to incorporate biotic changes in ESMs to improve the model performance in predicting C dynamics in permafrost regions. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Effect of freeze/thaw cycles on several biomarkers in urine from patients with kidney disease.

PubMed

Zhang, Yinan; Luo, Yi; Lu, Huijuan; Wang, Niansong; Shen, Yixie; Chen, Ruihua; Fang, Pingyan; Yu, Hong; Wang, Congrong; Jia, Weiping

2015-04-01

Urine samples were collected from eleven randomly selected patients with kidney disease, including diabetic nephropathy, chronic nephritis, and nephritic syndrome. Urine samples were treated with one of four protocols for freezing and thawing: freeze directly and thaw directly; freeze directly and thaw by temperature gradient; freeze by temperature gradient and thaw directly; and freeze by temperature gradient and thaw by temperature gradient. After one to six freeze/thaw cycles at -20°C or -80°C, different biomarkers showed differential stabilities. The concentrations of total protein, calcium, and potassium did not change significantly after five freeze/thaw cycles at either -20°C or -80°C. Albumin could only sustain three freeze/thaw cycles at -20°C before it started to degrade. We recommend that urine be stored at -80°C as albumin and the organic ions could sustain five and six freeze/thaw cycles, respectively, using the simple "direct freeze and direct thaw" protocol. Furthermore, in most cases, gradient freeze/thaw cycles are not necessary for urine sample storage.

The Effect of Liquid Nitrogen on Bone Graft Survival.

PubMed

Sirinoglu, Hakan; Çilingir, Özlem Tuğçe; Çelebiler, Ozhan; Ercan, Feriha; Numanoglu, Ayhan

2015-08-01

Liquid nitrogen is used in medicine for cancer treatment and tissue preservation; however, bone viability after its application is controversial. This study aims to evaluate both the tissue viability and the clinical and histopathologic findings following liquid nitrogen application with different thawing techniques in rats. Mandibular bone grafts were taken from 45 Wistar rats and freezed in liquid nitrogen for 20 minutes. In the rapid-thawing technique (Rapid Thawing-1, Rapid Thawing-2), the grafts were held for 20 minutes in room temperature; in the slow-thawing technique (Slow Thawing-1, Slow Thawing-2), 20 minutes in -20°C, 20 minutes in +4°C, and 20 minutes in room temperature, respectively. In Rapid Thawing-2 and Slow Thawing-2 groups, autografts were implanted to their origin for 3 weeks and bone staining with India ink was performed and samples taken for histologic examination. The amount of cells and blood vessels and the density of bone canaliculi were significantly reduced in Rapid Thawing-1 and Slow Thawing-1 groups comparing to the Control group. However, the reduction rate was more significant in the Slow Thawing-1 group. Histomorphometric evaluation of the healing autografts after 3 weeks revealed that the decreased amounts of canaliculi were not changed in Slow Thawing-2 group. The study results demonstrated that bone tissue survives after liquid nitrogen treatment regardless of the performed thawing technique; however, slow thawing causes more tissue damage and metabolism impairment. Thieme Medical Publishers 333 Seventh Avenue, New York, NY 10001, USA.

Environmental and physical controls on northern terrestrial methane emissions across permafrost zones

USGS Publications Warehouse

Olefeldt, David; Turetsky, Merritt R.; Crill, Patrick M.; McGuire, A. David

2013-01-01

Methane (CH4) emissions from the northern high-latitude region represent potentially significant biogeochemical feedbacks to the climate system. We compiled a database of growing-season CH4 emissions from terrestrial ecosystems located across permafrost zones, including 303 sites described in 65 studies. Data on environmental and physical variables, including permafrost conditions, were used to assess controls on CH4 emissions. Water table position, soil temperature, and vegetation composition strongly influenced emissions and had interacting effects. Sites with a dense sedge cover had higher emissions than other sites at comparable water table positions, and this was an effect that was more pronounced at low soil temperatures. Sensitivity analysis suggested that CH4 emissions from ecosystems where the water table on average is at or above the soil surface (wet tundra, fen underlain by permafrost, and littoral ecosystems) are more sensitive to variability in soil temperature than drier ecosystems (palsa dry tundra, bog, and fen), whereas the latter ecosystems conversely are relatively more sensitive to changes of the water table position. Sites with near-surface permafrost had lower CH4 fluxes than sites without permafrost at comparable water table positions, a difference that was explained by lower soil temperatures. Neither the active layer depth nor the organic soil layer depth was related to CH4 emissions. Permafrost thaw in lowland regions is often associated with increased soil moisture, higher soil temperatures, and increased sedge cover. In our database, lowland thermokarst sites generally had higher emissions than adjacent sites with intact permafrost, but emissions from thermokarst sites were not statistically higher than emissions from permafrost-free sites with comparable environmental conditions. Overall, these results suggest that future changes to terrestrial high-latitude CH4 emissions will be more proximately related to changes in moisture, soil temperature, and vegetation composition than to increased availability of organic matter following permafrost thaw.

Methane efflux measured by eddy covariance in Alaskan upland tundra undergoing permafrost degradation

NASA Astrophysics Data System (ADS)

Taylor, M.; Celis, G.; Ledman, J.; Bracho, R. G.; Schuur, E.

2017-12-01

Permafrost thaw can increase landscape heterogeneity, leading to wetter and drier soil conditions that affect the magnitude and form (carbon dioxide - CO2 and methane - CH4) of carbon produced via microbial decomposition. Environmental controls on CH4 emissions, especially in drier upland tundra systems, are not well understood. In degrading upland tundra permafrost, cold season CH4 fluxes may contribute significantly to annual emissions from CH4 production within unfrozen layers deep in the soil profile. Eight Mile Lake (EML), located in Interior Alaska near Denali National Park, is a moist acidic tussock tundra ecosystem undergoing permafrost degradation. Perennially frozen soils have warmed between 1985 and 2016 from -1.2 to -0.75˚C resulting in a deeper active layer depth from 61 to 70 cm between 2004-2016. Depth from the soil/moss surface to the water table perched on the permafrost surface has decreased from 30 to 20 cm over the same interval. Here we present the first year of continuous CH4 flux measurements made at EML (May 2016 - May 2017). The site was a net source of low-level CH4 emissions throughout the year. Annual CH4 emissions (1.3 g C yr-1) made up 8.8% of total annual C emissions (14.7 g m-2yr-1). Methane flux is related with soil temperatures during both summer and non-summer seasons. Emissions increased throughout the summer season as thaw depth and soil temperatures increased. In contrast with wetland sites where water table is at or above the soil surface for much of the growing season, EML is relatively dry and there was no relationship between soil moisture and emissions. Non-summer season CH4 emissions are related to increases in atmospheric and shallow soil temperatures. Winter season emissions account for 37% of the annual CH4 budget, the bulk of which occurred between October and January when deep soils remained thawed. Non-summer season CH4 and CO2 pulses appear to be coupled, suggesting a similar mechanism for release. We hypothesize that this relationship is the result of surface soils warming and cracking, allowing for the escape of microbially produced gases at depth. While annual CH4 emissions made up 8.8% of total annual C emissions at this site, taking into account the greenhouse warming potential of CH4 relative to CO2, the climate impact of CH4 is 15.6 g m-2yr-1, or 69% of the C budget.

Cryopreservation of spermatozoa of black marlin, Makaira indica (Teleostei: Istiophoridae).

PubMed

van der Straten, K M; Leung, L K-P; Rossini, R; Johnston, S D

2006-01-01

As a first step towards the development of a method for the cryopreservation of black marlin spermatozoa, this study investigated the effect of dimethylsulfoxide (DMSO) concentration and pellet size on post-thaw spermatozoal motility. Spermatozoa were recovered from the spermatic duct of testes retrieved post-mortem from four adult black marlin caught in the Coral Sea spawning grounds of Australia. Undiluted spermatozoa were stored on ice for 4 to 10 hours during transport to shore, then evaluated for motility after activation in seawater (1:10 v:v). Spermatozoa were prepared for cryopreservation in pellets by extension (1:3 v:v) in a defined fish Ringer's solution to give two final DMSO concentrations of 2.5% or 5.0%. Diluted spermatozoa were frozen directly on a dry ice block in pellet sizes of either 0.25 ml or 0.50 ml. Frozen pellets were thawed in a water bath at 40 degrees C for 60 seconds and assessed for post-thaw motility following activation in seawater. Spermatozoa recovered within 50 minutes of death and chilled on ice for 4 to 10 hours showed a mean (+/- SEM) motility immediately following activation of 91.6 +/- 7.9%. 50% of the spermatozoa remained motile for approximately 4 to 5 minutes. Following cryopreservation, mean motility declined significantly across all cryoprotectant and pellet size combinations (P < 0.001) but spermatozoa frozen in 2.5% DMSO showed higher motility than those frozen in 5.0% DMSO (P = 0.014). Pellet size had no effect on post-thaw motility (P = 0.179).

The Soil Moisture Active and Passive (SMAP) Mission

NASA Technical Reports Server (NTRS)

Entekhabi, Dara; Nijoku, Eni G.; ONeill, Peggy E.; Kellogg, Kent H.; Crow, Wade T.; Edelstein, Wendy N.; Entin, Jared K.; Goodman, Shawn D.; Jackson, Thomas J.; Johnson, Joel;

Cryopreservation of hepatic stellate cells.

PubMed

Neyzen, Svenja; Van de Leur, Eddy; Borkham-Kamphorst, Erawan; Herrmann, Jens; Hollweg, Günter; Gressner, Axel M; Weiskirchen, Ralf

2006-05-01

Isolated rat hepatic stellate cells (HSC) are taken as a valuable in vitro model to study hepatic fibrogenesis, biotransformation of pharmaceutics, gene expression, transcription factors controlling HSC behaviour, and for the establishment of long-term cultures. Consequently, methods for the isolation and maintenance of HSC cultures are well documented. However, there is ongoing controversial discussion directed on the existence and cellular origin of different HSC subpopulations. Thus, there is a continuing need for developing methods allowing the exchange of HSC isolates between different laboratories. A practical solution to this problem is cryopreservation and banking of HSC. We here describe for the first time the successful establishment of a methodology for long-term cryopreservation and recovery of primary, non-activated HSC from rats. We have optimised critical factors for HSC-banking including prefreeze processing, freezing rate, freezing medium, final cooling temperature, and thawing conditions. We found that DMSO gave far superior attachment and viability on thawing than other cryoprotectants. The viability and cellular characteristics of thawed cells was comparatively analysed by light- and electron microscopic analysis, proliferation assay, Oil Red O-staining, apoptosis testing, and evaluation of marker proteins for fibrogenic activities. In summary, our data reveal no significant differences in the biochemical and cellular properties between cryopreserved/thawed and freshly isolated HSC. According to these results, we suggest that cryoprotected HSC retain functional integrity thereby allowing banking and comfortable exchange of these cells between different laboratories.

Distribution of near-surface permafrost in Alaska: estimates of present and future conditions

USGS Publications Warehouse

Pastick, Neal J.; Jorgenson, M. Torre; Wylie, Bruce K.; Nield, Shawn J.; Johnson, Kristofer D.; Finley, Andrew O.

2015-01-01

High-latitude regions are experiencing rapid and extensive changes in ecosystem composition and function as the result of increases in average air temperature. Increasing air temperatures have led to widespread thawing and degradation of permafrost, which in turn has affected ecosystems, socioeconomics, and the carbon cycle of high latitudes. Here we overcome complex interactions among surface and subsurface conditions to map nearsurface permafrost through decision and regression tree approaches that statistically and spatially extend field observations using remotely sensed imagery, climatic data, and thematic maps of a wide range of surface and subsurface biophysical characteristics. The data fusion approach generated medium-resolution (30-m pixels) maps of near-surface (within 1 m) permafrost, active-layer thickness, and associated uncertainty estimates throughout mainland Alaska. Our calibrated models (overall test accuracy of ~85%) were used to quantify changes in permafrost distribution under varying future climate scenarios assuming no other changes in biophysical factors. Models indicate that near-surface permafrost underlies 38% of mainland Alaska and that near-surface permafrost will disappear on 16 to 24% of the landscape by the end of the 21st Century. Simulations suggest that near-surface permafrost degradation is more probable in central regions of Alaska than more northerly regions. Taken together, these results have obvious implications for potential remobilization of frozen soil carbon pools under warmer temperatures. Additionally, warmer and drier conditions may increase fire activity and severity, which may exacerbate rates of permafrost thaw and carbon remobilization relative to climate alone. The mapping of permafrost distribution across Alaska is important for land-use planning, environmental assessments, and a wide-array of geophysical studies.

Cryofacies evidences of a Yedoma (?) development during the last glacial maximum in Yukon (Canada) along the current Alaska border

NASA Astrophysics Data System (ADS)

Stephani, E.; Fortier, D.; Shur, Y.

2012-12-01

In some areas that remained unglaciated during the Late Pleistocene, inorganic and organic sedimentation supported syngenetic upward permafrost development and the creation of so-called yedoma deposits (Ice Complex). This type of periglacial deposit is usually very ice-rich and is highly unstable upon thawing. As this deposit thaws, the landscape goes from a carbon sink to a carbon and inorganic sediment source. This carbon can be released into the environment or transformed to CH4. Yedoma deposits have been extensively studied in Russia and more recently in Alaska. However, very few studies have focused on yedomas of Yukon. With the objective to provide regional information on yedoma distribution in North America, we present here preliminary field evidences of a yedoma deposit near Beaver Creek, close to current Alaska border. 28 boreholes were core-drilled, and cores were described and analyzed in the laboratory. Well-developed microlenticular cryostructures in silt and numerous small rootlets are typical of yedoma deposit. Tiny ice lenses are formed in fine-grained sediment by cryosuction and rootlets gets incorporated into the permafrost as the table rises syngenetically in response to surface sedimentation. During sedimentary accumulation, when sedimentation slows down, peat layers can be formed at the surface. This change in material properties often lead to the development of belt-like cryostructures (thick ice lenses separated by reticulate ice veins). At Beaver Creek, the microlenticular and belt-like cryofacies with rootlets (typical of syngenetic ice-rich yedoma) were abundant in Units 2A and 2C. The average ice content of Units 2A and 2C was respectively 91 % and 109 %, and the organic matter content (loss on ignition) was 6 % and 8 %. Significant thaw strain was measured in Units 2A (50%) and 2C (35%). Interestingly Unit 2B was very ice-poor (gravimetric ice content: 47 %, thaw strain: 9 %) and showed only porous cryostructure (interstitial ice) in silt (3 % organic matter). This was interpreted as ice-rich fine-grained soils that thawed, drained, and refroze afterward. This ice-poor layer with sediment deformations (e.g. fold, fault, diapir) is called 'taberal deposit' in the Russian literature. This layer can be observed in yedoma deposit in areas which were affected by permafrost degradation. Yedoma deposits are usually characterized by the presence of tall and wide ice wedges. These wedges form continuously as the permafrost table rises in response to surface sedimentation and their size is thus a function of sedimentation rate and time. In our study, we observed ice wedges at least 8 m tall (tip of the wedge > maximum coring depth). The bottom of the ice wedges was located in lodgement till (> 11 m below surface). This deposit was covered by woody peat deposit up to 4.9 m thick and was thus interpreted to be older than MIS 3. We propose that frost cracking first occurred in the peat and the underlying diamicton after the last interglacial and that upward syngenetic ice wedge growth followed silt accumulation over thousands of years sometimes during the last glacial period. The top of the ice wedges were located at about 2.5 m depth in Unit 2B. This indicates that ice wedge growth was interrupted by an episode of permafrost degradation and resumed afterward during accumulation of unit 2A.

Effect of addition of coconut water (Cocos nucifera) to the freezing media on post-thaw viability of boar sperm.

PubMed

Bottini-Luzardo, María; Centurión-Castro, Fernando; Alfaro-Gamboa, Militza; Aké-López, Ricardo; Herrera-Camacho, José

2013-01-01

The aims of this experiment were to evaluate the addition of coconut water in natura to the freezing media, compare the effect of deionized water vs filtered water of coconut over the post-thaw seminal characteristics, and evaluate the effect of the deionized water and in natura coconut water on the seminal characteristics of boar sperm at different post-thaw times. Thirty-four ejaculates were used divided in three aliquots which received one of the following treatments (T): T1, LEY (bidistilled water, lactose, and egg yolk) and LEYGO (LEY + glycerol and Orvus ET paste); T2, LEY(A) (coconut deionized water, lactose, and egg yolk)-LEYGO(A); and T3, LEY(B) (in natura coconut water, lactose, and egg yolk)-LEYGO(B). Samples of boar semen were frozen according to the Westendorf method, thawed at 38°C, and evaluated at three incubation times (0, 30, and 60 min). Seminal characteristics assessed were motility (Mot), acrosomal integrity (AInt), membrane integrity (MInt), and mitochondrial activity (MAct). T1 showed a higher percentage of viable sperm than T3 (Mot 36.5 vs 5.4 %, AInt 61.8 vs 41.2 %, MInt 50.4 vs 41.3 %, and MAct 56.9 vs 50.5 %). T2 kept a higher percentage of viable sperm at all incubation times. In natura coconut water showed a detrimental effect over the viability of the frozen-thawed boar semen. Deionized coconut water improved the boar semen viability post-thaw, outperforming results of in natura coconut water.

Slope instability related to permafrost changes on Mexican volcanoes

NASA Astrophysics Data System (ADS)

Delgado Granados, Hugo; Molina, Victor Soto

2015-04-01

Permafrost is present above 4,500 meters at the three highest Mexican mountains, Citlaltépetl, Popocatépetl and Iztaccihuatl (5,675, 5,452 and 5,286m asl, respectively), all active volcanoes. During the rainy season in the central region of Mexico, the occurrence of small debris-flows in the ice-free parts of the mountains, as well as small lanslides is frequent. At Popocatépetl volcano, flows are mostly related to a combination of the eruptive activity and climatic factors. However, the volcanic activity is different at Citlaltépetl and Iztaccihuatl where there is no eruptive activity, but landslides have occurred in recent years on their steep slopes because its stability has been altered as a result of an increase in the air temperature which in turn has caused variations in the thickness of the active layer of permafrost, causing as a consequence, the increase of an even more unstable soil. Additionally, cracks in the rock walls are subject to an increasing hydrostatic pressure due to continuous daily freezing and thawing of seasonal water produced by a warmer and less solid precipitation accumulating in the cracks over time and in the unconsolidated potentially unstable material.

Use of biochemical markers to evaluate the quality of fresh and cryopreserved semen from the arctic fox (Vulpes lagopus).

PubMed

Stasiak, K; Glogowski, J; Demianowicz, W; Kowalski, R; Nowak-Tkaczyk, A; Janicki, B

2014-01-01

The aim of this study was to use biochemical markers to evaluate the quality of fresh and cryopreserved semen from the arctic fox (Vulpes lagopus). Twenty-three manually collected ejaculates were analysed for the main indicators of semen quality (sperm concentration and ejaculate volume). Sperm motility and percentage of morphologically normal and abnormal spermatozoa were determined according to the stage of cryopreservation (fresh--measurement A; equilibrated--measurement B; frozen/thawed--measurement C). Furthermore, the seminal plasma and supernatants were analysed after equilibration and freeze/thawing for the activity of the enzymes alkaline phosphatase (ALP), acid phosphatase (AcP), lactate dehydrogenase (LDH) and aspartate aminotransferase (AspAT), and for the activity of acrosin inhibitors (AP). The mean concentration of sperm was 625.1 million/cm3, and ejaculate volume averaged 1.6 cm3. Seminal plasma was characterized by the highest activity of alkaline phosphatase (3.43 x 10(3) U/l) and lowest activity of acrosin inhibitors (4.55 x 10(3) U/l). After equilibration, the supernatants showed the highest activity of acid phosphatase (94.9 U/l) and after freeze-thawing, they showed a high activity of lactate dehydrogenase (535.8 U/l) and aspartate aminotransferase (577.1 U/l), which indicates that these proteins had leaked from spermatozoa into the extracellular medium during the biotechnique of semen cryopreservation. In addition, several significant relationships were found between some indicators of semen quality and plasma and/or supernatant enzyme activity.

The role of organic soil layer on the fate of Siberian larch forest and near-surface permafrost under changing climate: A simulation study

NASA Astrophysics Data System (ADS)

SATO, H.; Iwahana, G.; Ohta, T.

2013-12-01

Siberian larch forest is the largest coniferous forest region in the world. In this vast region, larch often forms nearly pure stands, regenerated by recurrent fire. This region is characterized by a short and dry growing season; the annual mean precipitation for Yakutsk was only about 240 mm. To maintain forest ecosystem under such small precipitation, underlying permafrost and seasonal soil freezing-thawing-cycle have been supposed to play important roles; (1) frozen ground inhibits percolation of soil water into deep soil layers, and (2) excess soil water at the end of growing season can be carried over until the next growing season as ice, and larch trees can use the melt water. As a proof for this explanation, geographical distribution of Siberian larch region highly coincides with continuous and discontinuous permafrost zone. Recent observations and simulation studies suggests that existences of larch forest and permafrost in subsurface layer are co-dependent; permafrost maintains the larch forest by enhancing water use efficiency of trees, while larch forest maintains permafrost by inhibiting solar radiation and preventing heat exchanges between soil and atmosphere. Owing to such complexity and absence of enough ecosystem data available, current-generation Earth System Models significantly diverse in their prediction of structure and key ecosystem functions in Siberian larch forest under changing climate. Such uncertainty should in turn expand uncertainty over predictions of climate, because Siberian larch forest should have major role in the global carbon balance with its huge area and vast potential carbon pool within the biomass and soil, and changes in boreal forest albedo can have a considerable effect on Northern Hemisphere climate. In this study, we developed an integrated ecosystem model, which treats interactions between plant-dynamics and freeze-thaw cycles. This integrated model contains a dynamic global vegetation model SEIB-DGVM, which simulates plant and carbon dynamics. It also contains a one-dimensional land surface model NOAH 2.7.1, which simulates soil moisture (both liquid and frozen), soil temperature, snowpack depth and density, canopy water content, and the energy and water fluxes. This integrated model quantitatively reconstructs post-fire development of forest structure (i.e. LAI and biomass) and organic soil layer, which dampens heat exchanges between soil and atmosphere. With the post-fire development of LAI and the soil organic layer, the integrated model also quantitatively reconstructs changes in seasonal maximum of active layer depth. The integrated model is then driven by the IPCC A1B scenario of rising atmospheric CO2, and by climate changes during the twenty-first century resulting from the change in CO2. This simulation suggests that forecasted global warming would causes decay of Siberian larch ecosystem, but such responses could be delayed by "memory effect" of the soil organic layer for hundreds of years.

The thin brown line: The crucial role of peat in protecting permafrost in Arctic Alaska

NASA Astrophysics Data System (ADS)

Gaglioti, B.; Mann, D. H.; Farquharson, L. M.; Baughman, C. A.; Jones, B. M.; Romanovsky, V. E.; Williams, A. P.; Andreu-Hayles, L.

2017-12-01

Ongoing warming threatens to thaw Arctic permafrost and release its stored carbon, which could trigger a permafrost-carbon feedback capable of augmenting global warming. The effects of warming air temperatures on permafrost are complicated by the fact that across much of the Arctic and Subarctic a mat of living plants and decaying litter cover the ground and buffer underlying permafrost from air temperatures. For simplicity here, we refer to this organic mat as "peat". Because this peat modifies heat flow between ground and air, the rate and magnitude of permafrost responses to changing climate - and hence the permafrost-carbon feedback - are partly slaved to the peat layer's slower dynamics. To explore this relationship, we used 14C-age offsets within lake sediments in Alaskan watersheds underlain by yedoma deposits to track the changing responses of permafrost thaw to fluctuating climate as peat accumulated over the last 14,000 years. As the peat layer built up, warming events became less effective at thawing permafrost and releasing ancient carbon. Consistent with this age-offset record, the geological record shows that early in post-glacial times when the peat cover was still thin and limited in extent, warm intervals triggered extensive thermokarst that resulted in rapid aggradation of floodplains. Today in contrast, hillslopes and floodplains remain stable despite rapid warming, probably because of the buffering effects of the extensive peat cover. Another natural experiment is provided by tundra fires like the 2007 Anaktuvuk River fire that removed the peat cover from tundra underlain by continuous permafrost and resulted in widespread thermkarsting. Further support for peat's critical role in protecting permafrost comes from the results of modeling how permafrost temperatures under different peat thicknesses respond to warming air temperature. Although post-industrial warming has not yet surpassed the buffering capacity of 14,000 years of peat buildup in Arctic Alaska, modeling suggests that a threshold is imminent.

Geochemical drivers of organic matter decomposition in Arctic tundra soils

DOE PAGES

Herndon, Elizabeth M.; Yang, Ziming; Graham, David E.; ...

2015-12-07

Climate change is warming tundra ecosystems in the Arctic, resulting in the decomposition of previously-frozen soil organic matter (SOM) and release of carbon (C) to the atmosphere; however, the processes that control SOM decomposition and C emissions remain highly uncertain. In this study, we evaluate geochemical factors that influence anaerobic production of carbon dioxide (CO 2) and methane (CH 4) in the active layers of four ice-wedge polygons. Surface and soil pore waters were collected during the annual thaw season over a two-year period in an area containing waterlogged, low-centered polygons and well-drained, high-centered polygons. We report spatial and seasonalmore » patterns of dissolved gases in relation to the geochemical properties of Fe and organic C as determined using spectroscopic and chromatographic techniques. Iron was present as Fe(II) in soil solution near the permafrost boundary but enriched as Fe(III) in the middle of the active layer, similar to dissolved aromatic-C and organic acids. Dissolved CH 4 increased relative to dissolved CO 2 with depth and varied with soil moisture in the middle of the active layer in patterns that were positively correlated with the proportion of dissolved Fe(III) in transitional and low-centered polygon soils but negatively correlated in the drier flat- and high-centered polygons. These results suggest that microbial-mediated Fe oxidation and reduction influence respiration/fermentation of SOM and production of substrates (e.g., low-molecular-weight organic acids) for methanogenesis. As a result, we infer that geochemical differences induced by water saturation dictate microbial products of SOM decomposition, and Fe geochemistry is an important factor regulating methanogenesis in anoxic tundra soils.« less

Changes to the Carbon and Energy fluxes in a Northern Peatland with Thawing Permafrost

NASA Astrophysics Data System (ADS)

Harder, S. R.; Roulet, N. T.; Crill, P. M.; Strachan, I. B.

2017-12-01

The maintenance of thaw of high carbon density landscapes in the permafrost region ultimately depends of how the energy balance is partitioned as temperatures and precipitation change, yet there are comparatively few energy balance studies, especially in peatlands that contain permafrost. While permafrost peatlands are currently net sinks of carbon, as Arctic temperatures rise and permafrost thaws, the future of these ecosystems and their capacity for carbon uptake is in question. Since 2012 we have been measuring the spatially integrated CO2, energy and water vapour fluxes from the Stordalen peatland (68°22'N, 19°03'E) using eddy covariance (EC). The Stordalen peatland is a heterogeneous peatland in the discontinuous permafrost zone where permafrost thaw is actively occurring, resulting in large changes to the landscape from year to year. Areas where permafrost is present are elevated by up to 1.5 m compared to the areas where permafrost has thawed causing differences in water table depth, peat temperatures, snow distribution, vegetation community and therefore in the carbon and energy fluxes. Our EC tower is located on the edge of a permafrost peat plateau (or palsa) where one fetch measures fluxes from an area underlain by permafrost and the other fetch sees the portion of the peatland where the permafrost has thawed. Within each sector, we have an array of soil temperature and water content sensors to determine the physical characteristics of each fetch. Extensive vegetation surveys (based on plant functional types or PFTs) have also been conducted to run a footprint analysis on the flux data to complete a comparative analysis of the magnitude and variability of the carbon and energy exchanges from PFT. The footprint analysis allows us to explain the difference in energy and carbon fluxes by examining the ecological, biogeochemical and physical characteristics within each footprint. We see distinctly different energy partitioning between the fetches containing intact permafrost and those where the permafrost has thawed: the evaporative efficiency is higher and the Bowen ration lower for the thawed fetches. Our results also show differences in the carbon fluxes depending on the tower footprint.

Illuminating Geochemical Controls of Methane Oxidation Along a Gradient of Permafrost Thaw

NASA Astrophysics Data System (ADS)

Perryman, C. R.; Kashi, N.; McCalley, C. K.; Malhotra, A.; Giesler, R.; Varner, R.

2017-12-01

Increases in annual mean temperature in the subarctic have accelerated the thaw of organic-rich permafrost peatlands, exacerbating methane (CH4) production from microbial decomposition of peat deposits and subsequent CH4 emissions. Methanotrophic bacteria may oxidize/consume upwards of 90% of produced CH4 in some settings, pending substrate availability and environmental conditions. Redox chemistry may also control the rate of CH4 oxidation in thawing permafrost areas, particularly redox potential (Eh) and the availability of oxygen (O2) and other terminal electron receptors. We investigated potential CH4 oxidation rates across a permafrost thaw gradient in Stordalen Mire (68°21'N,18°49'E) near Abisko, Sweden. Methane oxidation rates for sites from thawing and collapsed palsa, semi-wet Sphagnum, and open-water sedge sites were determined through laboratory incubations. Peat cores were extracted from two depths at each site and incubated at in situ temperatures and CH4 concentrations. Headspace samples were collected over a 48-hour period and analyzed for CH4 concentration using flame ionization detection gas chromatography (GC-FID). Dissolved O2, Eh, and dissolved CH4 were measured in sites with porewater. Oxidation rates ranged from <0.1 to 19 μg of CH4 per gram of dry biomass per day. Eh remained positive (41.6 to 316.8 mV) with available dissolved O2 (0.3 - 5.2 mg/L) in all measurement locations down to 20cm, indicating in situ aerobic CH4 oxidation is viable across these environments. Potential CH4 oxidation rates increased with increasing dissolved CH4 concentration. Highest potential CH4 oxidation rates were found in open-water sedge sites. Eh and dissolved O2 were lowest at these sites, suggesting that methanotrophs with low-O2 demand may populate sedge areas. Furthermore, potential CH4 oxidation rates were higher at depth than at the surface in thawing palsa, suggesting CH4 oxidation may mitigate CH4 production triggered by warming in these actively thawing environments. Forthcoming elemental analyses of peat and pore water will further elucidate trends and geochemical controls of CH4 oxidation rates in thawing permafrost areas.

Thawing of Frozen Tuna Meat

NASA Astrophysics Data System (ADS)

Tanaka, Takeo; Nishiwaki, Kôji; Kakuda, Kitonari; Tomimatsu, Takao

Frozen southern bluefin tuna meat discolors easily and sometimes contracts when thawed caused by thaw rigor. These phenomenon often become problematic in the transaction or handling of this kind of frozen tuna. Frozen meat blocks of southern Bluefin tuna were thawed separately by air thawing, running water thawing and microwave thawing. Changes occurring during thawing were checked for meat color by met-myoglobin ratio determination and for contract by microscopic observation. Results are as follows : (1) Discoloration scarcely occurred in the process of running water thawing (at 10°C for 50 min, or at 0°C for 6 hr). (2) No contraction was observed during thawing with running water described above and air thawing (at 18-20°C for 6 hr). (3) Discoloration and contraction seemed to be minimized, as to latently contractile blocks, when meat temperature passed through rapidly between -10°C and -5°C, and slowly (for 5-6 hr) between -5°C and -1°C. When the block was originally not contractile, discloration was minimized by rising meat temperature rapidly from -10°C to -l°C.

Active layer thermal monitoring of a Dry Valley of the Ellsworth Mountains, Continental Antarctica

NASA Astrophysics Data System (ADS)

Schaefer, Carlos Ernesto; Michel, Roberto; Souza, Karoline; Senra, Eduardo; Bremer, Ulisses

2015-04-01

The Ellsworth Mountains occur along the southern edge of the Ronne-Filchner Ice Shelf and are subdivided by the Minnesota Glacier into the Heritage Range to the east and the Sentinel Range to the West. The climate of the Ellsworth Mountains is strongly controlled by proximity to the Ronne-Filchner Ice Shelf and elevation. The mean annual air temperature at the 1,000 m level is estimated to be -25°C, and the average annual accumulation of water-equivalent precipitation likely ranges from 150 to 175 mm yr-1 (Weyant, 1966). The entire area is underlain by continuous permafrost of unknown thickness. Based on data collected from 22 pits, 41% of the sites contained dry permafrost below 70 cm, 27% had ice-cemented permafrost within 70 cm of the surface, 27% had bedrock within 70 cm, and 5% contained an ice-core (Bockheim, unpublished; Schaefer et al., 2015). Dry-frozen permafrost, which may be unique to Antarctica, appears to form from sublimation of moisture in ice-cemented permafrost over time. Active-layer depths in drift sheets of the Ellsworth Mountains range from 15 to 50 cm (Bockheim, unpublished); our understanding of Antarctic permafrost is poor, especially at the continent. The active layer monitoring sites were installed at Edson Hills, Ellsworth_Mountains, in the summer of 2012, and consist of thermistors (accuracy ± 0.2 °C) installed at 1 m above ground for air temperature measurements at two soil profiles on quartzite drift deposits, arranged in a vertical array (Lithic Haplorthel 886 m asl, 5 cm, 10 cm, 30 cm and Lithic Anyorthel 850 m asl, 5 cm, 10 cm, 30 cm). All probes were connected to a Campbell Scientific CR 1000 data logger recording data at hourly intervals from January 2nd 2012 until December 29th 2013. We calculated the thawing days (TD), freezing days (FD); isothermal days (ID), freeze thaw days (FTD), thawing degree days (TDD) and freezing degree days (FDD); all according to Guglielmin et al. (2008). Temperature at 5 cm reaches a maximum daily average in late December 2012, reaching a minimum in mid July 2013 on P1 (10.9 °C, -37.9 °C, ± 11.1) and P2 (6.9 °C, -37.1 °C, ± 10.2). The active layer thickness reaches a maximum of 48.4 cm at P1 on January 17th 2013 and 47.8 cm at P2 on January 7th 2012. No ID were recorded for the studied period, one TD was recorded at 5 cm on P2, 143 FTD were recorded at 5 cm, 81 at 10 cm and 46 days at 30 cm on P1, on P2 118 FTD were recorded at 5 cm, 80 at 10 cm and 42 days at 30 cm. The majority of the days were classified as FD for both sites; 585 at 5 cm, 647 at 10 cm and 684 days at 30 cm on P1, on P2 611 FD were recorded at 5 cm, 650 at 10 cm and 688 days at 30 cm. Only 17 FTD were recorded for the air temperature and 713 FD. Over the 728 days of the studied period the sum of all positive daily average temperatures was 166.3 TDD at 5 cm and 23.8 TDD at 10 cm on P1, 45.0 TDD at 5 cm and 5.2 TDD at 10 cm on P2. No positive daily average was recorded at 30 cm for both sites. The sum of all negative daily average temperatures was -13504.5 FDD at 5 cm, -13389.9 FDD at 10 cm and -13381.0 FDD at 30 cm on P1, -13508.0 FDD at 5 cm, -13486.6 FDD at 10 cm and -13398.9 FDD at 30 cm on P2. Only 0.28 TDD were summed for the air temperature and -14430.7 FDD. The soil thermal regime at the dry valley of Edson Hill, Ellsworth Mountains is characteristic of polar desert affected by Dry-frozen permafrost. Although air temperature does not reach high positive values, variations in soil temperature are more intense during the year, showing the soil's response to solar radiation.

Soil respiration and carbon loss relationship with temperature and land use conversion in freeze-thaw agricultural area.

PubMed

Ouyang, Wei; Lai, Xuehui; Li, Xia; Liu, Heying; Lin, Chunye; Hao, Fanghua

2015-11-15

Soil respiration (Rs) was hypothesized to have a special response pattern to soil temperature and land use conversion in the freeze-thaw area. The Rs differences of eight types of land use conversions during agricultural development were observed and the impacts of Rs on soil organic carbon (SOC) loss were assessed. The land use conversions during last three decades were categorized into eight types, and the 141 SOC sampling sites were grouped by conversion type. The typical soil sampling sites were subsequently selected for monitoring of soil temperature and Rs of each land use conversion types. The Rs correlations with temperature at difference depths and different conversion types were identified with statistical analysis. The empirical mean error model and the biophysical theoretical model with Arrhenius equation about the Rs sensitivity to temperature were both analyzed and shared the similar patterns. The temperature dependence of soil respiration (Q10) analysis further demonstrated that the averaged value of eight types of land use in this freeze-thaw agricultural area ranged from 1.15 to 1.73, which was lower than the other cold areas. The temperature dependence analysis demonstrated that the Rs in the top layer of natural land covers was more sensitive to temperature and experienced a large vertical difference. The natural land covers exhibited smaller Rs and the farmlands had the bigger value due to tillage practices. The positive relationships between SOC loss and Rs were identified, which demonstrated that Rs was the key chain for SOC loss during land use conversion. The spatial-vertical distributions of SOC concentration with the 1.5-km grid sampling showed that the more SOC loss in the farmland, which was coincided with the higher Rs in farmlands. The analysis of Rs dynamics provided an innovative explanation for SOC loss in the freeze-thaw agricultural area. The analysis of Rs dynamics provided an innovative explanation for SOC loss in the freeze-thaw agricultural area. Copyright © 2015 Elsevier B.V. All rights reserved.

Effect of prostatic fluid on the quality of fresh and frozen-thawed canine epididymal spermatozoa.

PubMed

Korochkina, E; Johannisson, A; Goodla, Lavanya; Morrell, J M; Axner, E

2014-12-01

Canine epididymal spermatozoa have a low freeze-tolerance ability compared with ejaculated spermatozoa, which could arise from the absence of prostatic fluid (PF). Therefore, the purpose of this work was to elucidate the influence of PF on the quality of canine epididymal sperm before and after freezing. Caudae epididymides were retrieved from eight dogs after routine castration. Spermatozoa were released by slicing the tissue and were extended in either Tris solution or PF before freezing. Frozen sperm samples were thawed at 70 °C for 8 seconds in a waterbath. Sperm concentration, motility using computer-assisted sperm analysis, morphology, plasma membrane, acrosome and chromatin integrity were assessed in the fresh sperm samples (after 20 minutes incubation) and at 0 and 4 hours after thawing. Progressive motility, distance straight line, distance average path, average path velocity, curvilinear velocity, straight line velocity, straightness, linearity, wobble, and beat cross frequency were significantly increased after extraction into PF. There was a higher proportion of spermatozoa with DNA damage in the PF treatment group at 4 hours after thawing than in the Tris treatment group (15.8% vs. 6.7%, P < 0.05). These results suggest that the addition of PF to canine spermatozoa activates sperm motility in fresh spermatozoa but has a negative effect on chromatin integrity after freezing-thawing. Copyright © 2014 Elsevier Inc. All rights reserved.

Cross-tolerance between osmotic and freeze-thaw stress in microbial assemblages from temperate lakes.

PubMed

Wilson, Sandra L; Frazer, Corey; Cumming, Brian F; Nuin, Paulo A S; Walker, Virginia K

2012-11-01

Osmotic stress can accompany increases in solute concentrations because of freezing or high-salt environments. Consequently, microorganisms from environments with a high-osmotic potential may exhibit cross-tolerance to freeze stress. To test this hypothesis, enrichments derived from the sediment and water of temperate lakes with a range of salt concentrations were subjected to multiple freeze-thaw cycles. Surviving isolates were identified and metagenomes were sampled prior to and following selection. Enrichments from alkali lakes were typically the most freeze-thaw resistant with only 100-fold losses in cell viability, and those from freshwater lakes were most susceptible, with cell numbers reduced at least 100,000-fold. Metagenomic analysis suggested that selection reduced assemblage diversity more in freshwater samples than in those from saline lakes. Survivors included known psychro-, halo- and alkali-tolerant bacteria. Characterization of freeze-thaw-resistant isolates from brine and alkali lakes showed that few isolates had ice-associating activities such as antifreeze or ice nucleation properties. However, all brine- and alkali-derived isolates had high intracellular levels of osmolytes and/or appeared more likely to form biofilms. Conversely, these phenotypes were infrequent amongst the freshwater-derived isolates. These observations are consistent with microbial cross-tolerance between osmotic and freeze-thaw stresses. © 2012 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

Seminal plasma applied post-thawing affects boar sperm physiology: a flow cytometry study.

PubMed

Fernández-Gago, Rocío; Domínguez, Juan Carlos; Martínez-Pastor, Felipe

2013-09-01

Cryopreservation induces extensive biophysical and biochemical changes in the sperm. In the present study, we used flow cytometry to assess the capacitation-like status of frozen-thawed boar spermatozoa and its relationship with intracellular calcium, assessment of membrane fluidity, modification of thiol groups in plasma membrane proteins, reactive oxygen species (ROS) levels, viability, acrosomal status, and mitochondrial activity. This experiment was performed to verify the effect of adding seminal plasma on post-thaw sperm functions. To determine these effects after cryopreservation, frozen-thawed semen from seven boars was examined after supplementation with different concentrations of pooled seminal plasma (0%, 10%, and 50%) at various times of incubation from 0 to 4 hours. Incubation caused a decrease in membrane integrity and an increase in acrosomal damage, with small changes in other parameters (P > 0.05). Although 10% seminal plasma showed few differences with 0% (ROS increase at 4 hours, P < 0.05), 50% seminal plasma caused important changes. Membrane fluidity increased considerably from the beginning of the experiment, and ROS and free thiols in the cell surface increased by 2 hours of incubation. By the end of the experiment, viability decreased and acrosomal damage increased in the 50% seminal plasma samples. The addition of 50% of seminal plasma seems to modify the physiology of thawed boar spermatozoa, possibly through membrane changes and ROS increase. Although some effects were detrimental, the stimulatory effect of 50% seminal plasma could favor the performance of post-thawed boar semen, as showed in the field (García JC, Domínguez JC, Peña FJ, Alegre B, Gonzalez R, Castro MJ, Habing GG, Kirkwood RN. Thawing boar semen in the presence of seminal plasma: effects on sperm quality and fertility. Anim Reprod Sci 2010;119:160-5). Copyright © 2013 Elsevier Inc. All rights reserved.

Rhesus monkey sperm cryopreservation with TEST-yolk extender in the absence of permeable cryoprotectant.

PubMed

Dong, Qiaoxiang; Correa, Liane M; VandeVoort, Catherine A

2009-02-01

Recently, there has been increased interest in ultra-rapid freezing with mammalian spermatozoa, especially for vitrification in the absence of cryoprotectants. Sperm cryopreservation in non-human primates has been successful, but the use of frozen-thawed sperm in standard artificial insemination (AI) remains difficult, and removal of permeable cryoprotectant may offer opportunities for increased AI success. The present study intended to explore the possibility of freezing rhesus monkey sperm in the absence of permeable cryoprotectants. Specifically, we evaluated various factors such as presence or absence of egg yolk, the percentage of egg yolk in the extenders, and the effect of cooling and thawing rate on the success of freezing without permeable cryoprotectants. Findings revealed that freezing with TEST in the absence of egg yolk offers little protection (<15% post-thaw motility). Egg yolk of 40% or more in TEST resulted in decreased motility, while egg yolk in the range of 20-30% yielded the most motile sperm. Cooling at a slow rate (29 degrees C/min) reduced post-thaw motility significantly for samples frozen with TEST-yolk alone, but had no effect for controls in the presence of glycerol. Similarly, slow thawing in room temperature air is detrimental for freezing without permeable cryoprotectant (<2% motility). In addition to motility, the ability of sperm to capacitate based on an increase in intracellular calcium levels upon activation with cAMP and caffeine suggested no difference between fresh and frozen-thawed motile sperm, regardless of treatment. In summary, the present study demonstrates that ejaculated and epididymal sperm from rhesus monkeys can be cryopreserved with TEST-yolk (20%) in the absence of permeable cryoprotectant when samples were loaded in a standard 0.25-mL straw, cooled rapidly in liquid nitrogen vapor at 220 degrees C/min, and thawed rapidly in a 37 degrees C water bath. This study also represents the first success of freezing without permeable cryoprotectant in non-human primates.

Research on the autumn irrigation schedule of Hetao Irrigation District of China

NASA Astrophysics Data System (ADS)

Han, Y.

2016-12-01

Salinization of soil has great influence on the function of crop land, leading to the crop failure to some extent. One of the inducement of salinization is that the water pressure of frozen soil is lower than that of unfrozen, salt is drew up to the frozen layer along with water during the freezing process. To prevent the salinization of soil, people carry out the autumn irrigation in Hetao Irrigation District which located is located in Bayannur City, Inner Mongolia, north of China. Autumn irrigation is an irrigation event before the freezing of soil, the function of autumn irrigation includes soil moisture conservation, loosening the soil and leaching the salt. Among all the crop models, none is designed to simulate the water and salt movement during freezing and thawing progress. So In this study, SWAP (Soil Water Atmosphere Plant) model is modified by adding the freezing and thawing module which enable the model to take into consideration the effect of freezing and thawing on water and salt movement. After validating the modified model using field data and lab test results, the model was used to simulate the results of various autumn irrigation schedules, exploring the influence of different autumn irrigation amounts on the water, salt and heat condition and transportation of soil. Finally, proper autumn irrigation schedule was obtained to instruct the production of Hetao Irrigation District.

Periglacial Landscape Stabilization Following Rapid Permafrost Degradation by Thermo-erosion, Bylot Island, Nunavut, Canadian Arctic Archipelago

NASA Astrophysics Data System (ADS)

Fortier, D.; Godin, E.; Perreault, N.; Levesque, E.

2010-12-01

The Byam Martin Mountains that run southeast-northwest across Bylot Island are covered by an ice cap which is flowing towards the lowlands into valleys. The bottom of these valleys is filled with sediments shaped into various periglacial landforms that developed during the Holocene such as ice-wedge polygons, pingos, and thermokarst lakes (Fortier and Allard, 2004). At the study site (N 73° 09’ - W 79° 53’), snow-melt run-off driven processes of thermo-erosion have recently drastically modified the periglacial landscape by creating extensive network of gullies in ice-wedge polygons. In the valley of glacier C-79, thirty five gullies, hundreds of meters to kilometers long, were identified and studied in the field. The formation of these gullies has changed the local hydrographic network by connecting the valley walls to a proglacial river flowing in the valley. The gully heads were characterized by active thermo-erosion processes operating underground and at the surface for a number of years (Fortier et al. 2007). Downstream, the gully walls were affected by various permafrost degradation processes such as active-layer detachment, retrogressive thaw slumping, drainage of the active layer of the polygons into the gully channel and differential thaw settlement of the surface (Godin and Fortier, 2010). It was observed that after a few years the downstream parts of the gully systems were stabilized and the gully walls partially colonized by vegetation. Drilling and coring operations into stabilized areas revealed the presence of ground ice a few decimeters below the surface with cryostructures indicative of permafrost aggradation. On stabilized gully walls, the sediments were aligned parallel to the slope and showed ice-rich reticulate to suspended cryostructures. Down to about one meter, the sediments were separated by centimeters-thick ice lenses which contained air bubbles aligned perpendicular to the slope. We propose that drainage of the soils on the slope and the subsequent colonization of stabilized slopes by vegetation changed the thermal properties of the soil which resulted in a thinning of the active layer and ground ice aggradation in the upper part of the permafrost. These negative feedback effects contributed to permafrost recovery and ground ice aggradation. The latent heat of this ice-rich zone will act as a buffer to global warming and contributes to the long-term stability of the gullies in the new periglacial landscape. Fortier, D., Allard, M. 2004. Late Holocene Syngenetic Ice-wedge Polygons Development, Bylot Island, Canadian Arctic Archipelago. Canadian Journal of Earth Sciences, 41: 997-1012. Fortier, D., Allard, M., Shur, Y. 2007. Observation of Rapid Drainage System Development by Thermal Erosion of Ice Wedges on Bylot Island, Canadian Arctic Archipelago. Permafrost and Periglacial Processes, 18: 229-243. Godin, E., Fortier, D. (in press) Geomorphology of thermo-erosion gullies - case study from Bylot Island, Nunavut, Canada. Proceedings 6th Canadian Permafrost Conference and 63rd Canadian Geotechnical Conference, Calgary, October 2010.

The Soil Moisture Active Passive (SMAP): Radar Measurements at High Latitudes and of Freeze/Thaw State

NASA Technical Reports Server (NTRS)

Spencer, Michael; Dunbar, Scott; Chen, Curtis

2013-01-01

The Soil Moisture Active/Passive (SMAP) mission is scheduled for a late 2014 launch date. The mission will use both active radar and passive radiometer instruments at L-Band. In order to achieve a wide swath at sufficiently high resolution for both active and passive channels, an instrument architecture that uses a large rotating reflector is employed. In this paper, a focus will be places on the radar design and associated data products at high latitudes. The radar will employ synthetic-aperture processing to achieve a "moderate" resolution dual-pol product over a 1000 km swath. Because the radar is operating continuously, very frequent temporal coverage will be achieved at high latitudes. This data will be used, among other things, to produce a surface freeze/thaw state data product.

Nonlinear CO 2 flux response to 7 years of experimentally induced permafrost thaw

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mauritz, Marguerite; Bracho, Rosvel; Celis, Gerardo

Rapid Arctic warming is expected to increase global greenhouse gas concentrations as permafrost thaw exposes immense stores of frozen carbon (C) to microbial decomposition. Permafrost thaw also stimulates plant growth, which could offset C loss. Using data from 7 years of experimental Air and Soil warming in moist acidic tundra, we show that Soil warming had a much stronger effect on CO 2 flux than Air warming. Soil warming caused rapid permafrost thaw and increased ecosystem respiration (R eco), gross primary productivity (GPP), and net summer CO 2 storage (NEE). Over 7 years R eco, GPP, and NEE also increasedmore » in Control (i.e., ambient plots), but this change could be explained by slow thaw in Control areas. In the initial stages of thaw, R eco, GPP, and NEE increased linearly with thaw across all treatments, despite different rates of thaw. As thaw in Soil warming continued to increase linearly, ground surface subsidence created saturated microsites and suppressed R eco, GPP, and NEE. However R eco and GPP remained high in areas with large Eriophorum vaginatum biomass. In general NEE increased with thaw, but was more strongly correlated with plant biomass than thaw, indicating that higher R eco in deeply thawed areas during summer months was balanced by GPP. Summer CO 2 flux across treatments fit a single quadratic relationship that captured the functional response of CO 2 flux to thaw, water table depth, and plant biomass. These results demonstrate the importance of indirect thaw effects on CO 2 flux: plant growth and water table dynamics. Nonsummer R eco models estimated that the area was an annual CO 2 source during all years of observation. As a result, nonsummer CO 2 loss in warmer, more deeply thawed soils exceeded the increases in summer GPP, and thawed tundra was a net annual CO 2 source.« less

Consumer Attitudes Toward Storing and Thawing Chicken and Effects of the Common Thawing Practices on Some Quality Characteristics of Frozen Chicken

PubMed Central

Benli, Hakan

2016-01-01

In this study, a survey was conducted to both evaluate the consumers’ general attitudes for purchasing and storing the raw chicken and determine the thawing practices used for defrosting frozen chicken at home. About 75% of the consumers indicated purchasing chicken meat at least once a week or more. Furthermore, the majority (82.16%) of those who stored at least a portion of the raw chicken stated freezing the raw chicken meat at home. Freezing the chicken meat was considered to have no effect on the quality by 43.49% of the consumers while 56.51% thought that freezing had either negative or positive effects on the quality. The survey study indicated that top five most commonly used thawing practices included thawing on the kitchen counter, thawing in the refrigerator, thawing in the warm water, thawing in the microwave, and thawing under tap water. In addition, an experimental study was conducted to determine the effects of these most commonly used thawing practices on some quality characteristics of the chicken meat including pH, drip loss, cooking loss, color analysis and textural profile analysis. Although, L* value for thawing on the kitchen counter was the lowest, after cooking, none of the thawing treatments have a significant effect on the color values. Thawing in the microwave produced the highest drip loss of 3.47% while the lowest drip loss of 0.62% was observed with thawing in the refrigerator. On the other hand, thawing in the microwave and refrigerator caused the lowest cooking loss values of 18.29% and 18.53%, respectively. Nevertheless, there were no significant differences among textural parameter values of the defrosted and then cooked samples using the home based thawing practices, indicating similar quality characteristics among the samples. PMID:26732333

Nonlinear CO 2 flux response to 7 years of experimentally induced permafrost thaw

DOE PAGES

Mauritz, Marguerite; Bracho, Rosvel; Celis, Gerardo; ...

2017-02-16

Rapid Arctic warming is expected to increase global greenhouse gas concentrations as permafrost thaw exposes immense stores of frozen carbon (C) to microbial decomposition. Permafrost thaw also stimulates plant growth, which could offset C loss. Using data from 7 years of experimental Air and Soil warming in moist acidic tundra, we show that Soil warming had a much stronger effect on CO 2 flux than Air warming. Soil warming caused rapid permafrost thaw and increased ecosystem respiration (R eco), gross primary productivity (GPP), and net summer CO 2 storage (NEE). Over 7 years R eco, GPP, and NEE also increasedmore » in Control (i.e., ambient plots), but this change could be explained by slow thaw in Control areas. In the initial stages of thaw, R eco, GPP, and NEE increased linearly with thaw across all treatments, despite different rates of thaw. As thaw in Soil warming continued to increase linearly, ground surface subsidence created saturated microsites and suppressed R eco, GPP, and NEE. However R eco and GPP remained high in areas with large Eriophorum vaginatum biomass. In general NEE increased with thaw, but was more strongly correlated with plant biomass than thaw, indicating that higher R eco in deeply thawed areas during summer months was balanced by GPP. Summer CO 2 flux across treatments fit a single quadratic relationship that captured the functional response of CO 2 flux to thaw, water table depth, and plant biomass. These results demonstrate the importance of indirect thaw effects on CO 2 flux: plant growth and water table dynamics. Nonsummer R eco models estimated that the area was an annual CO 2 source during all years of observation. As a result, nonsummer CO 2 loss in warmer, more deeply thawed soils exceeded the increases in summer GPP, and thawed tundra was a net annual CO 2 source.« less

Nonlinear CO2 flux response to 7 years of experimentally induced permafrost thaw.

PubMed

Mauritz, Marguerite; Bracho, Rosvel; Celis, Gerardo; Hutchings, Jack; Natali, Susan M; Pegoraro, Elaine; Salmon, Verity G; Schädel, Christina; Webb, Elizabeth E; Schuur, Edward A G

2017-09-01

Rapid Arctic warming is expected to increase global greenhouse gas concentrations as permafrost thaw exposes immense stores of frozen carbon (C) to microbial decomposition. Permafrost thaw also stimulates plant growth, which could offset C loss. Using data from 7 years of experimental Air and Soil warming in moist acidic tundra, we show that Soil warming had a much stronger effect on CO 2 flux than Air warming. Soil warming caused rapid permafrost thaw and increased ecosystem respiration (R eco ), gross primary productivity (GPP), and net summer CO 2 storage (NEE). Over 7 years R eco , GPP, and NEE also increased in Control (i.e., ambient plots), but this change could be explained by slow thaw in Control areas. In the initial stages of thaw, R eco , GPP, and NEE increased linearly with thaw across all treatments, despite different rates of thaw. As thaw in Soil warming continued to increase linearly, ground surface subsidence created saturated microsites and suppressed R eco , GPP, and NEE. However R eco and GPP remained high in areas with large Eriophorum vaginatum biomass. In general NEE increased with thaw, but was more strongly correlated with plant biomass than thaw, indicating that higher R eco in deeply thawed areas during summer months was balanced by GPP. Summer CO 2 flux across treatments fit a single quadratic relationship that captured the functional response of CO 2 flux to thaw, water table depth, and plant biomass. These results demonstrate the importance of indirect thaw effects on CO 2 flux: plant growth and water table dynamics. Nonsummer R eco models estimated that the area was an annual CO 2 source during all years of observation. Nonsummer CO 2 loss in warmer, more deeply thawed soils exceeded the increases in summer GPP, and thawed tundra was a net annual CO 2 source. © 2017 John Wiley & Sons Ltd.

Could cryopreserved human semen samples be stored at -80°C?

PubMed Central

Vaz, Carlos R; Lamim, Tamara; Salvador, Rafael A; Batschauer, Anna P B; Amaral, Vera Lucia L; Til, David

2018-01-01

Objective To evaluate storage time effects in cryopreserved human semen samples, kept in the freezer at a controlled temperature of -80°C, on sperm viability after thawing. Methods We used 20 semen samples. Each sample was cryopreserved in 10 fingers, which were divided into five groups: one group was kept in cryogenic canisters throughout the experiment(control), and four groups were kept in a VIP Ultra Low MDF-U76V- PE freezer, with the temperature set at -80°C, for 24, 48, 72 and 96 hours, respectively. After the exposure time, the samples were stored in cryogenic canisters after being thawed. The analyzed parameters were: motility, vitality and mitochondrial activity. Results After thawing, we noticed decreased sperm motility, vitality and mitochondrial activity, when comparing the tested groups with the control group, as well as a progressive reduction in the analyzed parameters between the times evaluated. Conclusions Cryopreservation of semen samples at -80°C is potentially harmful to sperm viability, causing damage when submitted to longer exposure times. PMID:29338138

Carbon dioxide, methane and nitrous oxide fluxes from a fire chronosequence in subarctic boreal forests of Canada.

PubMed

Köster, Egle; Köster, Kajar; Berninger, Frank; Aaltonen, Heidi; Zhou, Xuan; Pumpanen, Jukka

2017-12-01

Forest fires are one of the most important natural disturbances in boreal forests, and their occurrence and severity are expected to increase as a result of climate warming. A combination of factors induced by fire leads to a thawing of the near-surface permafrost layer in subarctic boreal forest. Earlier studies reported that an increase in the active layer thickness results in higher carbon dioxide (CO 2 ) and methane (CH 4 ) emissions. We studied changes in CO 2 , CH 4 and nitrous oxide (N 2 O) fluxes in this study, and the significance of several environmental factors that influence the greenhouse gas (GHG) fluxes at three forest sites that last had fires in 2012, 1990 and 1969, and we compared these to a control area that had no fire for at least 100years. The soils in our study acted as sources of CO 2 and N 2 O and sinks for CH 4 . The elapsed time since the last forest fire was the only factor that significantly influenced all studied GHG fluxes. Soil temperature affected the uptake of CH 4 , and the N 2 O fluxes were significantly influenced by nitrogen and carbon content of the soil, and by the active layer depth. Results of our study confirm that the impacts of a forest fire on GHGs last for a rather long period of time in boreal forests, and are influenced by the fire induced changes in the ecosystem. Copyright © 2017 Elsevier B.V. All rights reserved.

Improving Representations of Near-Surface Permafrost and Soil Temperature Profiles in the Regional Arctic System Model (RASM)

NASA Astrophysics Data System (ADS)

Gergel, D. R.; Hamman, J.; Nijssen, B.

2017-12-01

Permafrost and seasonally frozen soils are a key characteristic of the terrestrial Arctic, and the fate of near-surface permafrost as a result of climate change is projected to have strong impacts on terrestrial biogeochemistry. The active layer thickness (ALT) is the layer of soil that freezes and thaws annually, and shifts in the depth of the ALT are projected to occur over large areas of the Arctic that are characterized by discontinuous permafrost. Faithful representation of permafrost in land models in climate models is a product of both soil dynamics and the coupling of air and soil temperatures. A common problem is a large bias in simulated ALT due to a model depth that is too shallow. Similarly, soil temperatures often show systematic biases, which lead to biases in air temperature due to poorly modeled air-soil temperature feedbacks in a coupled environment. In this study, we use the Regional Arctic System Model (RASM), a fully-coupled regional earth system model that is run at a 50-km land/atmosphere resolution over a pan-Arctic domain and uses the Variable Infiltration Capacity (VIC) model as its land model. To understand what modeling decisions are necessary to accurately represent near-surface permafrost and soil temperature profiles, we perform a large number of RASM simulations with prescribed atmospheric forcings (e.g. VIC in standalone mode in RASM) while varying the model soil depth, thickness of soil moisture layers, number of soil layers and the distribution of soil nodes. We compare modeled soil temperatures and ALT to observations from the Circumpolar Active Layer Monitoring (CALM) network. CALM observations include annual ALT observations as well as daily soil temperature measurements at three soil depths for three sites in Alaska. In the future, we will use our results to inform our modeling of permafrost dynamics in fully-coupled RASM simulations.

Glaciohydrologic and Glaciohydraulic Effects on Runoff and Sediment Yield in Glacierized Basins

DTIC Science & Technology

1993-11-01

3 (17) wateron ice layers(Colbeck 1979). These complex- ities can be somewhat simplified by considering where (x = a constant = p, gi ...debris is reworked and modified ited on the ice by mass movements- rockfalls , by weathering, especially freeze-thaw, and by avalanches, slushflows (e.g...hydrological and glaciological studies have been supported by Grande Dixence over the last 40 where gi is the viscosity of water. As stated in an years at

Arctic Personnel Effects

DTIC Science & Technology

1983-09-16

snow; do not place in either cold or warm watsr; do not expose to hot air or open fires; do not use ointment or poultices. Thawing in the field...even in relatively warm temperatures if the wind penetrates the layer of insulating warm air to expose body tissue. As an example, with the wind calm...of 10 m/s (20 kts), the equivalent chill tempera- ture is -590C (-750F). Under these conditions thare is great danger and&I exposed flesh may freeze

Preliminary Guidelines and Standard Operating Procedure for Drainage and Erosion Control at McMurdo Station

DTIC Science & Technology

2014-12-01

along the impermeable frozen soil layer. Soil freeze–thaw action disrupts soil structures, displaces soils particles , and creates voids both in...discharging along the bank face). This was caused by excess pore water pressure. Soil piping removes soil particles from their in-situ position, leaving...soil particles ERDC/CRREL SR-14-3 30 c. Maintain original side and bed slopes during the clearing efforts. d. Shape the channels to minimize

Prospecting for Martian Ice from Orbit

NASA Technical Reports Server (NTRS)

Kanner, L. C.; Bell, M. S.; Allen, C. C.

2003-01-01

Recent data from the Gamma-Ray Spectrometer (GRS) on Mars Odyssey indicate the presence of a hydrogen-rich layer tens of centimeters thick in high latitudes on Mars. This hydrogen-rich layer correlates to previously determined regions of ice stability. It has been suggested that the subsurface hydrogen is ice and constitutes 35 plus or minus 15% by weight near the north and south polar regions. This study constrains the location of subsurface ice deposits on the scale of kilometers or smaller by combining GRS data with surface features indicative of subsurface ice. The most recognizable terrestrial geomorphic indicators of subsurface ice, formed in permafrost and periglacial environments, include thermokarst pits, pingos, pseudocraters and patterned ground. Patterned ground features have geometric forms such as circles, polygons, stripes and nets. This study focuses on the polygonal form of patterned ground, selected for its discernable shape and subsurface implications. Polygonal features are typically demarcated by troughs, beneath which grow vertical ice-wedges. Ice-wedges form in thermal contraction cracks in ice-rich soil and grow with annual freezing and thawing events repeated over tens of years. Ice wedges exist below the depth of seasonal freeze-thaw. Terrestrial ice wedges can be several meters deep and polygons can be tens of meters apart, and, on rare occasions, up to 1 km. The crack spacing of terrestrial polygons is typically 3 to 10 times the crack depth.

A practical method to detect the freezing/thawing onsets of seasonal frozen ground in Alaska

NASA Astrophysics Data System (ADS)

Chen, Xiyu; Liu, Lin

2017-04-01

Microwave remote sensing can provide useful information about freeze/thaw state of soil at the Earth surface. An edge detection method is applied in this study to estimate the onsets of soil freeze/thaw state transition using L band space-borne radiometer data. The Soil Moisture Active Passive (SMAP) mission has a L band radiometer and can provide daily brightness temperature (TB) with horizontal/vertical polarizations. We use the normalized polarization ratios (NPR) calculated based on the Level-1C TB product of SMAP (spatial resolution: 36 km) as the indicator for soil freeze/thaw state, to estimate the freezing and thawing onsets in Alaska in the year of 2015 and 2016. NPR is calculated based on the difference between TB at vertical and horizontal polarizations. Therefore, it is strongly sensitive to liquid water content change in the soil and independent with the soil temperature. Onset estimation is based on the detection of abrupt changes of NPR in transition seasons using edge detection method, and the validation is to compare estimated onsets with the onsets derived from in situ measurement. According to the comparison, the estimated onsets were generally 15 days earlier than the measured onsets in 2015. However, in 2016 there were 4 days in average for the estimation earlier than the measured, which may be due to the less snow cover. Moreover, we extended our estimation to the entire state of Alaska. The estimated freeze/thaw onsets showed a reasonable latitude-dependent distribution although there are still some outliers caused by the noisy variation of NPR. At last, we also try to remove these outliers and improve the performance of the method by smoothing the NPR time series.

Greenlandic Microbiomes and Greenhouse Gas Emissions

NASA Astrophysics Data System (ADS)

Jacobsen, C. S.; Nielsen, M. S.; Priemé, A.; Holben, W. E.; Stibal, M.; Morales, S.; Bælum, J.; Elberling, B.; Kuhry, P.; Hugelius, G.

2014-12-01

Thawing permafrost and the resulting mineralization of previously frozen organic carbon (C) and nitrogen (N) are considered important future feedbacks from terrestrial ecosystems to the atmosphere. We characterized two contrasting permafrost cores as well as 21 top permafrost cores from Zackenberg in High-Arctic Greenland which is a site characterized by progressive permafrost thawing of more than 1 cm y-1 since 1996. Samples have been analyzed for total C and N content, dissolved C and N as well as the potential production of carbon dioxide, methane and nitrous oxide in an incubation experiment. 10 days after the thawing was initiated, rRNA from selected samples were extracted, transformed into cDNA and cloned to obtain an overview of the most abundant active bacterial populations in the incubation experiment. A total of 697 clones were successfully sequenced, yielding 21 unique OTUs. Despite the relatively high coverage values the diversity of bacteria in the samples was low (with a maximum Shannon-Wiener diversity index of 2.1). Firmicutes (6 OTUs, 45-77% of clones) and Gammaproteobacteria (5 OTUs, 19-47% of clones) were the dominant groups in the samples, with Betaproteobacteria (4 OTUs), Actinobacteria (4 OTUs), Alphaproteobacteria (1 OTU) and Bacteroidetes (1 OTU) being less dominant. These characterizations revealed that those bacteria that are able to quickly colonize the thawing permafrost are mainly related to three groups of bacterial clones: Lysinibacillus; Pseudomonas and Clostridium. Quantification of functional genes related to soil nitrogen transformation were performed both on the DNA and on the mRNA level using primers specific for genes involved in production of nitrous oxide (nirS, nirK) and consumption of nitrous oxide (nosZ). This showed that the genes were found in most soils, but that they only were expressed at a low level. We further measured the rates of nitrous oxide release from the soils and found that these were not clearly related to the potential (DNA) and activity (mRNA) found in the soils. However, distinct differences were found in the active microbiomes of the thawed soils, and this is discussed in relation to the emission of N2O, CH4 and CO2.

Hemostatic profile and safety of pooled cryoprecipitate up to 120 hours after thawing.

PubMed

Lokhandwala, Parvez M; O'Neal, Adrian; Patel, Eshan U; Brunker, Patricia A R; Gehrie, Eric A; Zheng, Gang; Kickler, Thomas S; Ness, Paul M; Tobian, Aaron A R

2018-05-01

AABB standards state that cryoprecipitate should be transfused within 4 to 6 hours after thawing. We evaluated coagulation factor levels and sterility of thawed pooled cryoprecipitate to assess whether shelf life can be safely extended. Donor cryoprecipitate pools (n = 20, 10 group A, 10 group O) were held at ambient temperature and sampled at 0, 4, 8, 24, 48, 72, 96, and 120 hours post-thawing for fibrinogen, Factor (F)VIII, and von Willebrand factor (vWF) levels. Samples were tested at 0 and 120 hours for sterility (BacT/Alert system). Sixty additional cryoprecipitate pools were evaluated after 72 hours. Longitudinal differences in component levels were determined by linear fixed-effects regression. Group O cryoprecipitate had significantly lower FVIII (p = 0.002) and vWF activity (p = 0.006) compared to group A at 0 hours, but were not statistically different in fibrinogen levels (p = 0.33). Fibrinogen levels were stable over 5 days: 501 ± 81 mg/unit (mean ± standard deviation) at 0 hours to 506 ± 102 mg/unit at 120 hours (p = 0.73). Similarly, there was no decline in vWF activity: 200 ± 53 IU/unit at 0 hours to 209 ± 57 IU/unit at 120 hours (p = 0.084). The FVIII activity significantly declined on average by 9.6 IU (95% confidence interval, 5.5-13.8) between 0 hours (111 ± 33 IU/unit) and 120 hours post-thaw (101 ± 33) (p < 0.001). No organisms were detected when cryoprecipitate pools were cultured at 0 hours, but at 120 hours Staphylococcus epidermidis was identified from one pool, potentially a contaminant introduced during repeated sampling. No cultures were positive among the 60 additional cryoprecipitate pools assessed at 72 hours. Extended cryoprecipitate storage at ambient temperature did not affect fibrinogen levels over 120 hours. Sterility of products held at ambient temperature for an extended period of time could be assessed by secondary culture. © 2018 AABB.

Effects of a controlled freeze-thaw event on dissolved and colloidal soil organic matter.

PubMed

Kim, Eun-Ah; Lee, Ha Kyung; Choi, Jung Hyun

2017-01-01

This study investigated the effects of the freezing and thawing that accompany the warming process on the composition of the soil organic matter in the dissolved and colloidal fractions. Temperate soil samples were incubated in a refrigerator at 2 °C for 4 weeks and compared with those frozen at -20 °C in the second week followed by thawing at 2 °C to study a freeze-thaw effect with minimal effect from the thawing temperature. The freeze-thaw group was compared with those incubated at 25 °C in the last week to investigate a warming effect after thawing. Thawing at 2 °C after freezing at -20 °C increased the dissolved organic carbon (DOC), but decreased colloidal Ca. The subsequent warming condition greatly increased both DOC and colloidal Ca. The colloidal organic carbon (COC) and dissolved Ca showed rather subtle changes in response to the freeze-thaw and warming treatments compared to the changes in DOC and colloidal Ca. The fluorescence excitation-emission matrix (EEM) and Fourier transformation-infrared spectrometry (FT-IR) results showed that the freeze-thaw and warming treatments gave the opposite effects on the compositions of dissolved humic-like substances, polysaccharides or silicates, and aliphatic alcohols. A principal component analysis (PCA) with the DOC, fluorescence EEM, and FT-IR spectra produced two principal components that successfully distinguished the effects of the freeze-thaw and warming treatments. Due to the contrasting effects of the freeze-thaw and warming treatments, the overall effects of freeze-thaw events in nature on the dissolved and colloidal soil organic matter could vary depending on the thawing temperature.

Effect of Repeated Freeze-Thaw Cycles on Beef Quality and Safety

PubMed Central

Rahman, Mohammad Hafizur; Hossain, Mohammad Mujaffar; Rahman, Syed Mohammad Ehsanur; Hashem, Mohammad Abul

2014-01-01

The objectives of this study were to know the effect of repeated freeze-thaw cycles of beef on the sensory, physicochemical quality and microbiological assessment. The effects of three successive freeze-thaw cycles on beef forelimb were investigated comparing with unfrozen fresh beef for 75 d by keeping at −20±1℃. The freeze-thaw cycles were subjected to three thawing methods and carried out to know the best one. As the number of freeze-thaw cycles increased color and odor declined significantly before cook within the cycles and tenderness, overall acceptability also declined among the cycles after cook by thawing methods. The thawing loss increased and dripping loss decreased significantly (p<0.05). Water holding capacity (WHC) increased (p<0.05) until two cycles and then decreased. Cooking loss increased in cycle 1 and 3, but decreased in cycle 2. pH decreased significantly (p<0.05) among the cycles. Moreover, drip loss, cooking loss and WHC were affected (p<0.05) by thawing methods within the cycles. 2-Thiobarbituric acid (TBARS) value increased (p<0.05) gradually within the cycles and among the cycles by thawing methods. Total viable bacteria, total coliform and total yeast-mould count decreased significantly (p<0.05) within and among the cycles in comparison to the initial count in repeated freeze-thaw cycles. As a result, repeated freeze-thaw cycles affected the sensory, physicochemical and microbiological qua- lity of beef, causing the deterioration of beef quality, but improved the microbiological quality. Although repeated freeze-thaw cycles did not affect much on beef quality and safety but it may be concluded that repeated freeze and thaw should be minimized in terms of beef color for commercial value and WHC and tenderness/juiciness for eating quality. PMID:26761286

Ice-Wedge Polygon Formation Impacts Permafrost Carbon Storage and Vulnerability to Top-Down Thaw in Arctic Coastal Plain Soils

NASA Astrophysics Data System (ADS)

Jastrow, J. D.; Matamala, R.; Ping, C. L.; Vugteveen, T. W.; Lederhouse, J. S.; Michaelson, G. J.; Mishra, U.

2017-12-01

Ice-wedge polygons are ubiquitous, patterned ground features throughout Arctic coastal plains and river deltas. The progressive expansion of ice wedges influences polygon development and strongly affects cryoturbation and soil formation. Thus, we hypothesized that polygon type impacts the distribution and composition of soil organic carbon (C) stocks across the landscape and that such information can improve estimates of permafrost C stocks vulnerable to active layer thickening and increased decomposition due to climatic change. We quantified the distribution of soil C across entire polygon profiles (2-m depth) for three developmental types - flat-centered (FCP), low-centered (LCP), and high-centered (HCP) polygons (3 replicates of each) - formed on glaciomarine sediments within and near the Barrow Environmental Observatory at the northern tip of Alaska. Active layer thickness averaged 45 cm and did not vary among polygon types. Similarly, active layer C stocks were unaffected by polygon type, but permafrost C stocks increased from FCPs to LCPs to HCPs despite greater ice volumes in HCPs. These differences were due to a greater presence of organic horizons in the upper permafrost of LCPs and, especially, HCPs. On average, C stocks in polygon interiors were double those of troughs, on a square meter basis. However, HCPs were physically smaller than LCPs and FCPs, which affected estimates of C stocks at the landscape scale. Accounting for the number of polygons per unit area and the proportional distribution of troughs versus interiors, we estimated permafrost C stocks (2-m depth) increased from 259 Mg C ha-1 in FCPs to 366 Mg C ha-1 in HCPs. Active layer C stocks did not differ among polygon types and averaged 328 Mg C ha-1. We used our detailed polygon profiles to investigate the impact of active layer deepening as projected by Earth system models under future climate scenarios. Because HCPs have a greater proportion of upper permafrost C stocks in organic horizons, permafrost C in areas dominated by this polygon type may be at greater risk for destabilization. Thus, accounting for geospatial distributions of ice-wedge polygon types and associated variations in C stocks and composition could improve observational estimates of regional C stocks and their vulnerability to changing climatic conditions.

Coupled long-term summer warming and deeper snow alters species composition and stimulates gross primary productivity in tussock tundra.

PubMed

Leffler, A Joshua; Klein, Eric S; Oberbauer, Steven F; Welker, Jeffrey M

2016-05-01

Climate change is expected to increase summer temperature and winter precipitation throughout the Arctic. The long-term implications of these changes for plant species composition, plant function, and ecosystem processes are difficult to predict. We report on the influence of enhanced snow depth and warmer summer temperature following 20 years of an ITEX experimental manipulation at Toolik Lake, Alaska. Winter snow depth was increased using snow fences and warming was accomplished during summer using passive open-top chambers. One of the most important consequences of these experimental treatments was an increase in active layer depth and rate of thaw, which has led to deeper drainage and lower soil moisture content. Vegetation concomitantly shifted from a relatively wet system with high cover of the sedge Eriophorum vaginatum to a drier system, dominated by deciduous shrubs including Betula nana and Salix pulchra. At the individual plant level, we observed higher leaf nitrogen concentration associated with warmer temperatures and increased snow in S. pulchra and B. nana, but high leaf nitrogen concentration did not lead to higher rates of net photosynthesis. At the ecosystem level, we observed higher GPP and NEE in response to summer warming. Our results suggest that deeper snow has a cascading set of biophysical consequences that include a deeper active layer that leads to altered species composition, greater leaf nitrogen concentration, and higher ecosystem-level carbon uptake.

Extending airborne electromagnetic surveys for regional active layer and permafrost mapping with remote sensing and ancillary data, Yukon Flats ecoregion, central Alaska

USGS Publications Warehouse

Pastick, Neal J.; Jorgenson, M. Torre; Wylie, Bruce K.; Minsley, Burke J.; Ji, Lei; Walvoord, Michelle Ann; Smith, Bruce D.; Abraham, Jared D.; Rose, Joshua R.

2013-01-01

Machine-learning regression tree models were used to extrapolate airborne electromagnetic resistivity data collected along flight lines in the Yukon Flats Ecoregion, central Alaska, for regional mapping of permafrost. This method of extrapolation (r = 0.86) used subsurface resistivity, Landsat Thematic Mapper (TM) at-sensor reflectance, thermal, TM-derived spectral indices, digital elevation models and other relevant spatial data to estimate near-surface (0–2.6-m depth) resistivity at 30-m resolution. A piecewise regression model (r = 0.82) and a presence/absence decision tree classification (accuracy of 87%) were used to estimate active-layer thickness (ALT) (< 101 cm) and the probability of near-surface (up to 123-cm depth) permafrost occurrence from field data, modelled near-surface (0–2.6 m) resistivity, and other relevant remote sensing and map data. At site scale, the predicted ALTs were similar to those previously observed for different vegetation types. At the landscape scale, the predicted ALTs tended to be thinner on higher-elevation loess deposits than on low-lying alluvial and sand sheet deposits of the Yukon Flats. The ALT and permafrost maps provide a baseline for future permafrost monitoring, serve as inputs for modelling hydrological and carbon cycles at local to regional scales, and offer insight into the ALT response to fire and thaw processes.

Role of rainwater induced subsurface flow in water-level dynamics and thermoerosion of shallow thermokarst ponds on the Northeastern Qinghai-Tibet Plateau

NASA Astrophysics Data System (ADS)

Pan, X.; Yu, Q.; You, Y.

2014-12-01

Understanding hydrological and thermal regimes of thermokarst lakes is of great importance for predicting their responses to climate change. However, mechanism of water-level dynamics and associated thermal effects on thermoerosion of thermokarst lakes are still not well understood on the Qinghai-Tibet Plateau (QTP). In this study, we investigate two typical shallow thermokarst ponds (namely small lakes) in a warm permafrost region with thick active layer on the northeastern QTP through quantifying water budget. Results demonstrate that, rainfall induced subsurface lateral flow dominates pond water-level regime. Annual variation of pond water-level relies on areal water budget of surrounding active layer, particularly the high variable of precipitation. Besides, it is worth noting the extraordinary warming during the late ice-cover period, because marked air gap between upper ice-cover and underlying water, led by the upward thawing of thick ice-cover, might result in greenhouse-like condition due to the unique weather that strong solar radiation and little snowpack. This hydrological mechanism also exerts evident impacts on thermal regime and thermoerosion of the shallow thermokarst ponds, and they are closely related to retreat of thermokarst pondshore and underlying permafrost degradation. These findings imply a localized model addressing the unique hydrological and thermal regimes of thermokarst lakes would be essential to study the evolution of these shallow rainwater dominated thermokarst ponds on the QTP.

Microbial diversity in European alpine permafrost and active layers.

PubMed

Frey, Beat; Rime, Thomas; Phillips, Marcia; Stierli, Beat; Hajdas, Irka; Widmer, Franco; Hartmann, Martin

2016-03-01

Permafrost represents a largely understudied genetic resource. Thawing of permafrost with global warming will not only promote microbial carbon turnover with direct feedback on greenhouse gases, but also unlock an unknown microbial diversity. Pioneering metagenomic efforts have shed light on the permafrost microbiome in polar regions, but temperate mountain permafrost is largely understudied. We applied a unique experimental design coupled to high-throughput sequencing of ribosomal markers to characterize the microbiota at the long-term alpine permafrost study site 'Muot-da-Barba-Peider' in eastern Switzerland with an approximate radiocarbon age of 12 000 years. Compared to the active layers, the permafrost community was more diverse and enriched with members of the superphylum Patescibacteria (OD1, TM7, GN02 and OP11). These understudied phyla with no cultured representatives proposedly feature small streamlined genomes with reduced metabolic capabilities, adaptations to anaerobic fermentative metabolisms and potential ectosymbiotic lifestyles. The permafrost microbiota was also enriched with yeasts and lichenized fungi known to harbour various structural and functional adaptation mechanisms to survive under extreme sub-zero conditions. These data yield an unprecedented view on microbial life in temperate mountain permafrost, which is increasingly important for understanding the biological dynamics of permafrost in order to anticipate potential ecological trajectories in a warming world. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Scaling Laws in Arctic Permafrost River Basins: Statistical Signature in Transition

NASA Astrophysics Data System (ADS)

Rowland, J. C.; Gangodagamage, C.; Wilson, C. J.; Prancevic, J. P.; Brumby, S. P.; Marsh, P.; Crosby, B. T.

2011-12-01

The Arctic landscape has been shown to be fundamentally different from the temperate landscape in many ways. Long winters and cold temperatures have led to the development of permafrost, perennially frozen ground, that controls geomorphic processes and the structure of the Arctic landscape. Climate warming is causing changes in permafrost and the active layer (the seasonally thawed surface layer) that is driving an increase in thermal erosion including thermokarst (collapsed soil), retrogressive thaw slumps, and gullies. These geomorphic anomalies in the arctic landscapes have not been well quantified, even though some of the landscape geomorphic and hydrologic characteristics and changes are detectable by our existing sensor networks. We currently lack understanding of the fundamental fluvio-thermal-erosional processes that underpin Arctic landscape structure and form, which limits our ability to develop models to predict the landscape response to current and future climate change. In this work, we seek a unified framework that can explain why permafrost landscapes are different from temperate landscapes. We use high resolution LIDAR data to analyze arctic geomorphic processes at a scale of less than a 1 m and demonstrate our ability to quantify the fundamental difference in the arctic landscape. We first simulate the arctic hillslopes from a stochastic space-filling network and demonstrate that the flow-path convergent properties of arctic landscape can be effectively captured from this simple model, where the simple model represents a landscape flowpath arrangement on a relatively impervious frozen soil layer. Further, we use a novel data processing algorithm to analyze landscape attributes such as slope, curvature, flow-accumulation, elevation-drops and other geomorphic properties, and show that the pattern of diffusion and advection dominated soil transport processes (diffusion/advection regime transition) in the arctic landscape is substantially different from the pattern in temperate landscapes. Our results suggest that Arctic landscapes are characterized by relatively undissected, long planar hillslopes, which convey sediment to quasi-fluvial valleys through long (~ 1 km) flow-paths. Further, we also document that broad planar hillslopes abruptly converge, forcing rapid subsurface flow accumulation at channel heads. This topographic characteristic can successfully be used to explain the position of erosion features. Finally we estimate the landscape model parameters for the arctic landscape that can be successfully used to model development and validation purposes.

SP-100 lithium thaw design, analysis, and testing

NASA Astrophysics Data System (ADS)

Choe, Hwang; Schrag, Michael R.; Koonce, David R.; Gamble, Robert E.; Halfen, Frank J.; Kirpich, Aaron S.

1993-01-01

The thaw design has been established for the 100 kWe SP-100 Space Reactor Power System. System thaw/startup analysis has confirmed that all system thaw requirements are met, and that rethaw and restart can be easily accomplished with this design. In addition, a series of lithium thaw characterization tests has been performed, confirming key design assumptions.

Carcass and meat quality of dual-purpose chickens (Lohmann Dual, Belgian Malines, Schweizerhuhn) in comparison to broiler and layer chicken types.

PubMed

Mueller, S; Kreuzer, M; Siegrist, M; Mannale, K; Messikommer, R E; Gangnat, I D M

2018-05-18

Currently, there is an intensive ethical discussion about the practice of culling day-old layer cockerels. One solution to avoid this practice could be using dual-purpose types, where males are fattened for meat and females used for egg production. The aim of the present study was to compare fattening performance, carcass conformation, and composition as well as meat quality of Lohmann Dual, a novel dual-purpose type, and 2 traditional dual-purpose types (Belgian Malines and Schweizerhuhn) with 2 broiler types and 1 layer type (Lohmann Brown Plus). Broilers included a conventional line (Ross PM3) and a slower-growing line (Sasso 51) fulfilling requirements of organic farming. Nine birds of each type were fed on a conventional broiler diet. Feed intake and metabolizability of nitrogen and energy were recorded per pen (n = 3), the latter through excreta sampling. For each bird, carcass conformation was assessed, and weights of body, carcass, breast meat, legs, wings, and inner organs were determined. Additionally, breast angle, an indicator for carcass appeal, and skin color were recorded. Meat quality assessment included determinations of thaw and cooking loss, shear force, meat color, and proximate composition of the breast meat. None of the dual-purpose types (20 to 30 g ADG) performed as well in growth as the intensively growing broiler line (68 g ADG). However, Lohmann Dual could compete with the slower-growing broiler line (slower growth but better feed efficiency, similar in carcass weight and breast proportion). Also breast angle was quite similar between Lohmann Dual (100°) and the extensive broiler type (115°C) compared to the intensive broiler line (180°). Meat quality was most favorable in the intensive broilers with the smallest shear force and thawing loss, whereas meat quality was not different between the other types. The Schweizerhuhn performed only at the level of the layer hybrid, and the Belgian Malines was ranked only slightly better.

Evaluation of snow and frozen soil parameterization in a cryosphere land surface modeling framework in the Tibetan Plateau

NASA Astrophysics Data System (ADS)

Zhou, J.

2017-12-01

Snow and frozen soil are important components in the Tibetan Plateau, and influence the water cycle and energy balances through snowpack accumulation and melt and soil freeze-thaw. In this study, a new cryosphere land surface model (LSM) with coupled snow and frozen soil parameterization was developed based on a hydrologically improved LSM (HydroSiB2). First, an energy-balance-based three-layer snow model was incorporated into HydroSiB2 (hereafter HydroSiB2-S) to provide an improved description of the internal processes of the snow pack. Second, a universal and simplified soil model was coupled with HydroSiB2-S to depict soil water freezing and thawing (hereafter HydroSiB2-SF). In order to avoid the instability caused by the uncertainty in estimating water phase changes, enthalpy was adopted as a prognostic variable instead of snow/soil temperature in the energy balance equation of the snow/frozen soil module. The newly developed models were then carefully evaluated at two typical sites of the Tibetan Plateau (TP) (one snow covered and the other snow free, both with underlying frozen soil). At the snow-covered site in northeastern TP (DY), HydroSiB2-SF demonstrated significant improvements over HydroSiB2-F (same as HydroSiB2-SF but using the original single-layer snow module of HydroSiB2), showing the importance of snow internal processes in three-layer snow parameterization. At the snow-free site in southwestern TP (Ngari), HydroSiB2-SF reasonably simulated soil water phase changes while HydroSiB2-S did not, indicating the crucial role of frozen soil parameterization in depicting the soil thermal and water dynamics. Finally, HydroSiB2-SF proved to be capable of simulating upward moisture fluxes toward the freezing front from the underlying soil layers in winter.

Development of a land surface model with coupled snow and frozen soil physics

NASA Astrophysics Data System (ADS)

Wang, Lei; Zhou, Jing; Qi, Jia; Sun, Litao; Yang, Kun; Tian, Lide; Lin, Yanluan; Liu, Wenbin; Shrestha, Maheswor; Xue, Yongkang; Koike, Toshio; Ma, Yaoming; Li, Xiuping; Chen, Yingying; Chen, Deliang; Piao, Shilong; Lu, Hui

2017-06-01

Snow and frozen soil are important factors that influence terrestrial water and energy balances through snowpack accumulation and melt and soil freeze-thaw. In this study, a new land surface model (LSM) with coupled snow and frozen soil physics was developed based on a hydrologically improved LSM (HydroSiB2). First, an energy-balance-based three-layer snow model was incorporated into HydroSiB2 (hereafter HydroSiB2-S) to provide an improved description of the internal processes of the snow pack. Second, a universal and simplified soil model was coupled with HydroSiB2-S to depict soil water freezing and thawing (hereafter HydroSiB2-SF). In order to avoid the instability caused by the uncertainty in estimating water phase changes, enthalpy was adopted as a prognostic variable instead of snow/soil temperature in the energy balance equation of the snow/frozen soil module. The newly developed models were then carefully evaluated at two typical sites of the Tibetan Plateau (TP) (one snow covered and the other snow free, both with underlying frozen soil). At the snow-covered site in northeastern TP (DY), HydroSiB2-SF demonstrated significant improvements over HydroSiB2-F (same as HydroSiB2-SF but using the original single-layer snow module of HydroSiB2), showing the importance of snow internal processes in three-layer snow parameterization. At the snow-free site in southwestern TP (Ngari), HydroSiB2-SF reasonably simulated soil water phase changes while HydroSiB2-S did not, indicating the crucial role of frozen soil parameterization in depicting the soil thermal and water dynamics. Finally, HydroSiB2-SF proved to be capable of simulating upward moisture fluxes toward the freezing front from the underlying soil layers in winter.

An approach to successful freezing of demi-embryos derived from day-7 bovine embryos.

PubMed

Niemann, H; Brem, G; Sacher, B; Smidt, D; Kräusslich, H

1986-04-01

The developmental capacity of frozen/thawed bisected embryos (n = 33) derived from day-7 bovine embryos was investigated and compared to ordinary embryos after freezing and thawing (n = 28) and to freshly bisected embryos (n = 19). The freezing and thawing protocol was identical for ordinary and demi-embryos. The percentage of intact embryos classified as excellent, good, or poor after thawing was 92.9 and 96.3% for ordinary and demi-embryos, respectively. Pregnancy rates of 53.8 (8 15 ), 46.2 (6 13 ), and 47.5% (9 19 ) were obtained when frozen/thawed ordinary embryos and frozen/thawed demi-embryos classified as excellent or good and sealed with an additional zona pellucida from hatched pig blastocysts or freshly bisected embryos were transferred. One pair of identical twins resulted from the transfer of frozen/thawed demi-embryos sealed with an additional zona pellucida. Transfer of four frozen/thawed demi-embryos without an additional zona pellucida led to one pregnancy. In contrast, demi-embryos derived from frozen/thawed ordinary embryos (n = 8) as well as frozen/thawed demi-embryos classified as poor (n = 6) did not result in any pregnancies although two halves were transferred per recipient. It is concluded that sealing the punctured zona pellucida improves the developmental capacity of frozen/thawed demi-embryos derived from day-7 bovine embryos, and freezing demi-embryos is more efficient compared to the splitting of frozen/thawed ordinary embryos.

Migration of Water in Litopenaeus Vannamei Muscle Following Freezing and Thawing.

PubMed

Deng, Qi; Wang, Yaling; Sun, Lijun; Li, Jianrong; Fang, Zhijia; Gooneratne, Ravi

2018-06-15

Water and protein are major constituents of shrimp, any changes in protein and the state of water influence the quality of shrimp. Therefore, a study to examine the law of moisture migration and protein denaturation under different freezing and thawing conditions is important. The proton density images of thawed frozen-shrimp revealed that the water loss during quick-freezing was much greater than that during slow freezing or microfreezing. At room temperature (25 °C), the water loss from brine-thawing was more than still-water thawing and still-water thawing was more than thawing spontaneously. Freezing-thawing resulted in uniform water redistribution in shrimp muscle. Nuclear magnetic resonance technology (low field magnetic imaging) was used to directly monitor the dynamic processes of fluidity state in shrimp and indirectly monitor protein denaturation and thereby determine the optimal method of freezing-thawing shrimp. Our research showed that microfreezing preservation minimized weight loss, juice leakage and protein denaturation in shrimp muscle during thawing. Water is one of the major components in most organs and is an important factor that influences the shrimp muscle quality. Water migration patterns and subsequent effects on the shrimp muscle under different freezing and thawing conditions were examined using low field nuclear magnetic resonance (NMR) technology. This research provides a theoretical foundation for shrimp processing plants to improve the freezing and thawing process to obtain optimal quality and flavor of shrimp products. © 2018 Institute of Food Technologists®.

Temperature-Induced Protein Release from Water-in-Oil-in-Water Double Emulsions

PubMed Central

Rojas, Edith C.; Staton, Jennifer A.; John, Vijay T.; Papadopoulos, Kyriakos D.

2009-01-01

A model water-in-oil-in-water (W1/O/W2) double emulsion was prepared by a two-step emulsification procedure and subsequently subjected to temperature changes that caused the oil phase to freeze and thaw while the two aqueous phases remained liquid. Our previous work on individual double-emulsion globules1 demonstrated that crystallizing the oil phase (O) preserves stability, while subsequent thawing triggers coalescence of the droplets of the internal aqueous phase (W1) with the external aqueous phase (W2), termed external coalescence. Activation of this instability mechanism led to instant release of fluorescently tagged bovine serum albumin (fluorescein isothiocyanate (FITC)-BSA) from the W1 droplets and into W2. These results motivated us to apply the proposed temperature-induced globule-breakage mechanism to bulk double emulsions. As expected, no phase separation of the emulsion occurred if stored at temperatures below 18 °C (freezing point of the model oil n-hexadecane), whereas oil thawing readily caused instability. Crucial variables were identified during experimentation, and found to greatly influence the behavior of bulk double emulsions following freeze-thaw cycling. Adjustment of these variables accounted for a more efficient release of the encapsulated protein. PMID:18543998

BOREAS RSS-17 1994 ERS-1 Level-3 Freeze/Thaw Backscatter Change Images

NASA Technical Reports Server (NTRS)

Rignot, Eric; Nickeson, Jaime (Editor); Hall, Forrest G. (Editor); Way, JoBea; McDonald, Kyle C.; Smith, David E. (Technical Monitor)

2000-01-01

The Boreal Ecosystem-Atmosphere Study (BOREAS) Remote Sensing Science (RSS)-17 team acquired and analyzed imaging radar data from the European Space Agency's (ESA's) European Remote Sensing Satellite (ERS)-1 over a complete annual cycle at the BOREAS sites in Canada in 1994 to detect shifts in radar backscatter related to varying environmental conditions. Two independent transitions corresponding to soil thaw and possible canopy thaw were revealed by the data. The results demonstrated that radar provides an ability to observe thaw transitions at the beginning of the growing season, which in turn helps constrain the length of the growing season. The data set presented here includes change maps derived from radar backscatter images that were mosaicked together to cover the southern BOREAS sites. The image values used for calculating the changes are given relative to the reference mosaic image. The data are stored in binary image format files. The imaging radar data are available from the Earth Observing System Data and Information System (EOSDIS) Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC). The data files are available on a CD-ROM (see document number 20010000884).

Increased coagulation and fibrinolytic potential of solvent-detergent plasma: a comparative study between Omniplasma and fresh frozen plasma.

PubMed

van Beers, J J B C; van Egmond, L T; Wetzels, R J H; Verhezen, P W M; Beckers, E A M; van Oerle, R; Spronk, H M H; Straat, R J M H E; Henskens, Y M C

2016-07-01

In this study, differences in levels of proteins involved in coagulation and fibrinolysis were compared between fresh frozen (quarantine plasma) and Omniplasma. Furthermore, thawing conditions and plasma stability after thawing were studied. 10 Omniplasma and 10 quarantine plasma units were used to study different procoagulation, anticoagulation and fibrinolytic parameters. Analysis took place at different time-points during plasma storage at 2-6°C. At baseline, significant reduced levels of factor V, free protein S, α2-antiplasmin and tPA-induced ROTEM lysis time were observed in Omniplasma as compared to quarantine plasma. Moreover, thrombin generation, IXa-AT complex levels and factor XIa were significantly increased in Omniplasma. The majority of the parameters studied remained stable in Omniplasma 48 h after thawing, with the exception of factor VIII (decrease) and IXa-AT (increase). Our results suggest an increased coagulation potential, presumingly as a result of contact activation during the production process and also, an increased fibrinolytic potential in Omniplasma. The stability of Omniplasma, based upon the different parameters studied, is comparable to Q-plasma. A maximum post-thawing time of 48 hfor Omniplasma can be suggested. © 2016 International Society of Blood Transfusion.

NASAs Soil Moisture Active Passive (SMAP) Mission and Opportunities For Applications Users

NASA Technical Reports Server (NTRS)

Brown, Molly E.; Escobar, Vanessa; Moran, Susan; Entekhabi, Dara; O'Neill, Peggy; Njoku, Eni G.; Doorn, Brad; Entin, Jared K.

2013-01-01

Water in the soil, both its amount (soil moisture) and its state (freeze/thaw), plays a key role in water and energy cycles, in weather and climate, and in the carbon cycle. Additionally, soil moisture touches upon human lives in a number of ways from the ravages of flooding to the needs for monitoring agricultural and hydrologic droughts. Because of their relevance to weather, climate, science, and society, accurate and timely measurements of soil moisture and freeze/thaw state with global coverage are critically important.

Methane flux and carbon isotope composition correlate to shifting plant and microbial communities along a permafrost thaw gradient

NASA Astrophysics Data System (ADS)

McCalley, C. K.; Mondav, R.; Chanton, J.; Crill, P. M.; Hodgkins, S. B.; Kim, E.; Rich, V. I.; Wehr, R.; Woodcroft, B. J.; Tyson, G. W.; Saleska, S. R.

2012-12-01

Methane flux from high latitude wetlands is a critical component of the global carbon budget and is highly sensitive to climate change, with observed and predicted increases as permafrost thaws. Microorganisms mediate wetland methane cycling, but connections between ecosystem-scale flux and underlying microbial dynamics are poorly understood. To address this gap we used isotopic (laser absorption spectrometry) and molecular (16S rRNA gene amplicon sequencing) techniques in a high latitude (68° N) wetland to investigate the relationship between microbial community composition and methane emissions across a permafrost thaw gradient. The transition from permafrost dominated, well drained palsas, through intermediate thaw sites dominated by Sphagnum spp., to wet sites with no underlying permafrost dominated by Eriophorum angustifolium is associated with substantial increases in methane emission. Across this thaw progression the carbon isotopic composition of emitted methane increased from -79.5 ‰ in the intermediate-thawing site to -66.4 ‰ in the thawed site, indicating a relative shift from CO2-reductive towards acetoclastic methanogenesis. Increases in methane flux under thaw were correlated with increasing abundance of methane-producing archaeal clades and increases in methane isotopic composition were associated with shifts in the archaeal community. While CO2 reducing methanogens were found throughout thawing and thawed sites, methanogens of the Methanosarcina (the order of Archaea that contains all known acetoclastic methanogens) were most associated with the fully thawed site. These results directly link microbial community composition to ecosystem scale changes in the magnitude and isotopic composition of methane emissions under permafrost thaw. If isotopic shifts of this magnitude are characteristic of methane dynamics under permafrost loss they should also become detectable in global atmospheric methane observations, providing a global scale tracer of shifting microbial communities associated with permafrost thaw.

l-Cysteine improves antioxidant enzyme activity, post-thaw quality and fertility of Nili-Ravi buffalo (Bubalus bubalis) bull spermatozoa.

PubMed

Iqbal, S; Riaz, A; Andrabi, S M H; Shahzad, Q; Durrani, A Z; Ahmad, N

2016-11-01

The effects of l-cysteine in extender on antioxidant enzymes profile during cryopreservation, post-thaw quality parameters and in vivo fertility of Nili-Ravi buffalo bull spermatozoa were studied. Semen samples from 4 buffalo bulls were diluted in Tris-citric acid-based extender having different concentrations of l-cysteine (0.0, 0.5, 1.0, 2.0 and 3.0 mm) and frozen in 0.5-ml French straws. The antioxidative enzymes [catalase, super oxide dismutase and total glutathione (peroxidase and reductase)] were significantly higher (P < 0.05) at pre-freezing and post-thawing in extender containing 2.0 mm l-cysteine as compared to other groups. Post-thaw total motility (%), progressive motility (%), rapid velocity (%), average path velocity (μm s -1 ), straight line velocity (μm s -1 ), curvilinear velocity (μm s -1 ), beat cross frequency (Hz), viable spermatozoa with intact plasmalemma (%), acrosome and DNA integrity (%) were higher with the addition of 2.0 mm l-cysteine as compared to other groups (P < 0.05). The fertility rates (59 versus 43%) were higher (P < 0.05) in buffaloes inseminated with doses containing 2.0 mm of l-cysteine than in the control. In conclusion, the addition of 2.0 mm l-cysteine in extender improved the antioxidant enzymes profile, post-thaw quality and in vivo fertility of Nili-Ravi buffalo bull spermatozoa. © 2016 Blackwell Verlag GmbH.

Comparison of CH4 Emission and CO2 Exchange Between 2013 and 2014 in a Subarctic Peatland

NASA Astrophysics Data System (ADS)

Clarizia, P. E.; Verbeke, B. A.; McCalley, C. K.; Werner, S. L.; Malhotra, A.; Burke, S. A.; Crill, P. M.; Varner, R. K.

2014-12-01

One of the major concerns with climate change is the potential feedback from the emission of greenhouse gases, carbon dioxide (CO2) and methane (CH4), from high latitude thawing organic soils. With increasing temperatures in Arctic regions, thawing permafrost palsas transition to wetter sedge-dominated wetlands, which account for 20-39% of global atmospheric CH4 burden. This rapid change in habitat raises the following question: how do CO2 exchange rates and CH4 emissions change along a gradient of permafrost thaw and what is the interannual variability in these fluxes? To address this question, we measured CO2 exchange, CH4 flux, vegetative type and vascular green area (VGA) along a thaw gradient during July of 2013 and 2014 in Stordalen Mire, Sweden. Environmental variables showed that 2013 and 2014 were climatically different; higher photosynthetically active radiation (PAR) and measurements of water table level and temperature showed that 2014 was warmer and drier than 2013. Warmer conditions led to higher rates of respiration and gross primary productivity (GPP), with the largest increases observed in the palsa sites, likely due to an increase in mean temperature. Methane fluxes showed a less consistent response to climate differences between years, fluxes were higher in 2014 in the mostly inundated Eriophorum angustifolium dominated site and lower in the drier Sphagnum and Eriophorum vaginatum dominated sites. Results of this study highlight the need for accounting for interannual variability when predicting greenhouse gas emissions during permafrost thaw.

Projections of the 21st Century Freezing/Thawing Index in the Northern Hemisphere

NASA Astrophysics Data System (ADS)

Frauenfeld, O. W.; Zhang, T.; Teng, H.; Etringer, A. J.

2006-12-01

Variability in the ground thermal regime in high-latitude cold regions has important ramifications for surface and subsurface hydrology, carbon exchange, the surface energy and moisture balance, and ecosystem diversity and productivity. However, assessing these variations, particularly in light of reported widespread atmospheric and terrestrial changes over recent decades, remains a challenge due to the sparse observing networks in high latitudes. The annual freezing/thawing (F/T) index can be used to predict and map permafrost and seasonally frozen ground distribution, active layer and seasonal freeze depths, and has important engineering applications, thereby providing important information on climate variability in cold regions. Reliable long-term measurements of the F/T index are thus important variables for understanding and predicting high-latitude climate processes. The F/T index is defined as the cumulative number of degree-days below/above 0°C for a given time period. However, in recent work we have established that long- term monthly air temperature measurements can be used very reliably to approximate the annual F/T index. This has enabled us to produce a 25-km gridded Northern Hemisphere annual F/T index data set for 1901-2002 (see http://nsidc.org/data/ggd649.html). In this current effort we employ model projections of surface air temperatures from the Intergovernmental Panel on Climate Change (IPPC) Fourth Assessment Report (AR4) to provide an estimate of 21st century F/T index changes. This will provide an important analog to recent work on trying to establish near-surface permafrost changes in the Arctic. We will make use of runs for the four emission scenarios ("commit," "SRESA2," "SRESA1B," and "SRESB1") and "20th Century Climate in Coupled Models" (20c3m) from all 16 available models, as well as a multi-model ensemble. We first perform a comparison between our existing historical data base of F/T indices and the overlapping period of the IPCC model runs to assess the correspondence between historical observations and models. Next, we calculate the F/T index based on future scenarios, and apply the 20th century F/T indices to estimate future distributions of frozen ground, as well as active layer and seasonal freeze depths.

The impact of fire on nitrogen availability in the Yukon Kuskokwim Delta, Alaska

NASA Astrophysics Data System (ADS)

Jardine, L.; Natali, S.; Schade, J. D.; Holmes, R. M.; Mann, P. J.; Pena, H., III

2017-12-01

Rising temperatures and changing precipitation patterns in the Arctic are increasing the severity and frequency of fires, resulting in direct and indirect changes to permafrost ecosystems. Due to slow rates of decomposition, nitrogen (N) is a highly limiting resource in tundra. The availability of N can be substantially altered following fire as a direct result of combustion of organic matter and also due to long-term changes in ecosystem structure and function. It is critical to understand both the short- (years) and long (decades)-term effects of fire on N availability because of the role of N in arctic ecosystems. In order to better understand the availability of N following fire, we collected active layer and permafrost soil and vegetation samples from unburned, 2015 burn scars, and 1972 burn scars in peat plateau tundra in the Yukon Kuskokwim Delta, Alaska. We measured carbon (C) and nitrogen (N) concentrations and pools in plants and soils, and soil organic matter content, extractable inorganic N and potentially mineralizable N in active layer (0-30 cm) and surface permafrost (to 100 cm). We found that active layer N concentrations were significantly lower in the two-year burn, but N concentrations in the 45-year burn were comparable to that of unburned tundra. The levels of ammonium in the active layer were nearly three times higher in both the two- and in the 45-year-old burns, while extractable nitrate was low (<3 ug/L) at all sites. These results suggest that ammonium is retained for decades following its initial post-fire increase or that new pools of ammonium are becoming available as a result of fire-mediated permafrost thaw or microbial community changes. These results suggest that 45 years after disturbance by fire, there is still a large potential for N assimilation, nitrification, or nitrous oxide production in tundra ecosystems. These findings are especially relevant as fire regimes intensify across the Arctic, which may have long-term consequences for plant and soil communities and ecosystem C and N storage.

Permafrost in the Yukon-Kuskokwim Delta, Alaska: a case for a holistic and integrated view of permafrost degradation

NASA Astrophysics Data System (ADS)

Herman-Mercer, N. M.; Schuster, P. F.; Laituri, M.; Elder, K.; Mutter, E. A.; Massey, M.; Matkin, E.; Toohey, R.

2016-12-01

The Yukon-Kuskokwim Delta (YKD) region of Alaska is a vast, marshy, lowland plain, underlain by discontinuous permafrost vulnerable to degradation. This region has been home to the Yup'ik and Cup'ik people, subsisting on local resources for centuries. Permafrost thaw in northern latitudes has become the focus of extensive scientific research in recent decades. However, the indigenous residents that live in these areas of degrading permafrost have been largely left out of scientific discussion and studies. More than fifty semi-structured interviews were conducted in four YKD communities. Interview questions were focused on the broad themes of seasonality of subsistence systems and observations of weather and landscape change. Responses revealed the myriad ways people interact with and observe permafrost in their day to day lives. For instance, permafrost is still utilized for food storage, people encounter permafrost when digging graves, and observe permafrost thaw in damage to their homes and other infrastructure in their communities. Yup'ik and Cup'ik residents have an intimate knowledge of the landscape owing to their subsistence based lifestyle and have reported observations of slumping ground, eroding river banks and coast lines as well as land that seems to be rising. Indigenous knowledge and observations complement broader scientific studies and should be used to inform permafrost research and assist in reconstructing historical baselines of permafrost distribution and active layer depth. Further, results of scientific research must be communicated to the people that may be impacted by present and future changes to permafrost that will likely result in changes to hydrologic flowpaths and ultimately ecosystem dynamics that may impact subsistence. Over millennia, northern indigenous communities have developed flexibility in resource harvesting and have exhibited adaptability to a variable and harsh environment. However, changes are being experienced at an accelerated rate and historic cultural adaptation strategies such as movement across the land are hampered by the sedentary nature of villages today. Therefore, an understanding of potential future scenarios that assess the impacts of permafrost thaw on a local scale will help communities adapt.

Effect of the holding time at 15 °C prior to cryopreservation, the thawing rate and the post-thaw incubation temperature on the boar sperm quality after cryopreservation.

PubMed

Tomás, Cristina; Gómez-Fernández, José; Gómez-Izquierdo, Emilio; de Mercado, Eduardo

2014-01-30

The aim of the present study was to evaluate the effect of the holding time at 15 °C prior to cryopreservation (2, 4 and 8h), thawing rate (37 °C for 20s or 70 °C for 8s) and post-thaw incubation temperature (15 °C or 37 °C) on the post-thaw boar sperm quality. These are important time periods in the freezing-thawing process which have been less studied. Sperm-rich ejaculate fractions from three healthy boars were collected once a week for five consecutive weeks and were cryopreserved with the lactose-egg yolk extender (LEY). Sperm quality was determined by assessing the motility, the acrosome status, and the sperm plasma membrane integrity at 30, 150 and 240 min of incubation. The results show that with the holding time at 15 °C prior to cryopreservation there was not a clear effect until at least 24h of holding time. The thawing rate and the post-thaw incubation temperature, however, had a marked effect on sperm quality. When the samples were thawed at 70 °C for 8s, the sperm viability, motility and some kinetic variables (VCL, VSL, VAP and ALH) were greater than with results observed when the samples were thawed at 37 °C for 20s. In addition after thawing the sperm samples incubated at 15 °C had a sustained sperm quality for longer, up to 4h post-thawing. Copyright © 2014 Elsevier B.V. All rights reserved.

A comparative study of quality and safety of Atlantic cod (Gadus morhua) fillets during cold storage, as affected by different thawing methods of pre‐rigor frozen headed and gutted fish

PubMed Central

Jónsson, Ásbjörn; Backi, Christoph Josef; Lunestad, Bjørn Tore; Karlsdóttir, Magnea G

2017-01-01

Abstract BACKGROUND The catch of marine whitefish is typically seasonal, whereas the land‐based processing industry has a need for all‐year stable supply of raw materials. This challenge can be met by applying fish frozen at sea. When using frozen fish, the methods employed for thawing may influence the safety and quality of the final product. This study aimed to investigate the applicability of novel thawing strategies in order to provide an all‐year supply of high‐quality and safe cod products. RESULTS Comparative investigations of quality and safety factors after thawing in water, with and without air circulation, and contact thawing were performed. The parameters included water‐holding capacity, thawing loss, drip loss, cooking yield, sensory evaluation and microbiological analyses (including total volatile bases nitrogen). Water thawing with air circulation provided faster thawing than water thawing without air circulation and contact thawing. For all three methods, the quality of the thawed fish was acceptable and the shelf life of the fillets during chilled storage was between 10 and 14 days post‐filleting. CONCLUSION The results show that controlled freezing of cod, followed by appropriate thawing, may provide the processing industry with an all‐year delivery of raw materials, without compromising quality and safety of the final product. © 2017 The Authors. Journal of The Science of Food and Agriculture published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry. PMID:28862323

Defined Combinations of Cryomedia and Thawing Extenders Influence the Viable X-Y Boar Sperm Ratio in Vitro.

PubMed

Korchunjit, W; Kaeoket, K; Kitiyanant, Y; Taylor, J; Wongtawan, T

It is believed that plasma membrane X- and Y-chromosome bearing sperm are different; therefore the freezing and thawing process may affect X- and Y-sperm differently. The objective of this study was to investigate the effect of cryomedia and thawing extenders on the survival of X and Y-sperm. Three different cryomedia and thawing extenders were compared. Viable motile sperm were separated using a swim-up technique. Real-time PCR was used to identify the sperm type. Using CryoA for freezing and Beltsville-Thawing-Solution (BTS) as the thawing extender yielded significantly higher numbers of viable motile Y sperm (64 percent) than control (48 percent) (P < 0.01). Conversely, semen freezing with CryoC and thawing with Androstar Plus gave a significantly lower number of viable motile Y sperm (32 percent) than control (51 percent). Our results revealed that defined combinations of cryomedia and thawing extenders significantly altered the survival ratio of frozen-thawed X-Y sperm in vitro, which has potential implications for artificial insemination.

Trehalose improves semen antioxidant enzymes activity, post-thaw quality, and fertility in Nili Ravi buffaloes (Bubalus bubalis).

PubMed

Iqbal, Sajid; Andrabi, Syed Murtaza Hassan; Riaz, Amjad; Durrani, Aneela Zameer; Ahmad, Nasim

2016-03-15

Our objectives were to study the effect of trehalose in extender on (1) antioxidant enzymes profile during cryopreservation (after dilution, before freezing, and after thawing), (2) in vitro quality (after thawing), and (3) in vivo fertility of Nili Ravi buffalo (Bubalus bubalis) bull spermatozoa. Semen samples (n = 20) from four buffalo bulls were diluted in Tris-citric acid-based extender having different concentrations of trehalose (0.0, 15, 30, 45, and 60 mM) and frozen in French straws. At post dilution, profile of sperm catalase (U/mL) was higher (P < 0.05) in extenders containing 15, 30, and 45 mM of trehalose as compared to control. Although profiles of superoxide dismutase (U/mL) and total glutathione (μM) were higher (P < 0.05) in extenders containing 15 and 30 mM of trehalose as compared to control. At prefreezing, sperm catalase, superoxide dismutase, and total glutathione profiles were higher (P < 0.05) in all the treatment groups as compared to control. At post thawing, the profiles of catalase and total glutathione were higher (P < 0.05) in extender containing 30-mM trehalose as compared to other treatment groups and control. Whereas, profile of superoxide dismutase was higher (P < 0.05) in extenders containing 30, 45, and 60 mM of trehalose as compared to control and 15mM group. Post thaw total sperm motility (%) was higher (P < 0.05) in extender containing 30-mM trehalose as compared to control and 15 and 60-mM groups. Although sperm progressive motility (%), rapid velocity (%), average path velocity (μm/s), straight line velocity (μm/s), curvilinear velocity (μm/s), plasma membrane (structural and functional, %), acrosome (%), and DNA (%) integrity were higher (P < 0.05) in extender containing 30 mM trehalose as compared to other treatment groups and control. The fertility rates (61% vs. 43%) were higher (P < 0.05) in buffaloes inseminated with semen doses cryopreserved in extender containing 30 mM of trehalose than the control. It is concluded that addition of 30-mM trehalose in extender improves the semen antioxidant enzymes activity, post thaw quality, and fertility in Nili Ravi buffaloes. Copyright © 2016 Elsevier Inc. All rights reserved.

Freeze-thaw-induced embolism in Pinus contorta: centrifuge experiments validate the 'thaw-expansion hypothesis' but conflict with ultrasonic emission data.

PubMed

Mayr, Stefan; Sperry, John S

2010-03-01

*The 'thaw-expansion hypothesis' postulates that xylem embolism is caused by the formation of gas bubbles on freezing and their expansion on thawing. We evaluated the hypothesis using centrifuge experiments and ultrasonic emission monitoring in Pinus contorta. *Stem samples were exposed to freeze-thaw cycles at varying xylem pressure (P) in a centrifuge before the percentage loss of hydraulic conductivity (PLC) was measured. Ultrasonic acoustic emissions were registered on samples exposed to freeze-thaw cycles in a temperature chamber. *Freeze-thaw exposure of samples spun at -3 MPa induced a PLC of 32% (one frost cycle) and 50% (two cycles). An increase in P to -0.5 MPa during freezing had no PLC effect, whereas increased P during thaw lowered PLC to 7%. Ultrasonic acoustic emissions were observed during freezing and thawing at -3 MPa, but not in air-dried or water-saturated samples. A decrease in minimum temperature caused additional ultrasonic acoustic emissions, but had no effect on PLC. *The centrifuge experiments indicate that the 'thaw-expansion hypothesis' correctly describes the embolization process. Possible explanations for the increase in PLC on repeated frost cycles and for the ultrasonic acoustic emissions observed during freezing and with decreasing ice temperature are discussed.

Thawing as a critical pre-analytical step in the lipidomic profiling of plasma samples: New standardized protocol.

PubMed

Pizarro, Consuelo; Arenzana-Rámila, Irene; Pérez-del-Notario, Nuria; Pérez-Matute, Patricia; González-Sáiz, José María

2016-03-17

Lipid profiling is a promising tool for the discovery and subsequent identification of biomarkers associated with various diseases. However, data quality is quite dependent on the pre-analytical methods employed. To date, potential confounding factors that may affect lipid metabolite levels after the thawing of plasma for biomarker exploration studies have not been thoroughly evaluated. In this study, by means of experimental design methodology, we performed the first in-depth examination of the ways in which thawing conditions affect lipid metabolite levels. After the optimization stage, we concluded that temperature, sample volume and the thawing method were the determining factors that had to be exhaustively controlled in the thawing process to ensure the quality of biomarker discovery. Best thawing conditions were found to be: 4 °C, with 0.25 mL of human plasma and ultrasound (US) thawing. The new US proposed thawing method was quicker than the other methods we studied, allowed more features to be identified and increased the signal of the lipids. In view of its speed, efficiency and detectability, the US thawing method appears to be a simple, economical method for the thawing of plasma samples, which could easily be applied in clinical laboratories before lipid profiling studies. Copyright © 2016 Elsevier B.V. All rights reserved.

Effect of Novel Quick Freezing Techniques Combined with Different Thawing Processes on Beef Quality

PubMed Central

Yoo, Seon-Mi; Han, Gui-Jung

2014-01-01

This study investigated the effect of various freezing and thawing techniques on the quality of beef. Meat samples were frozen using natural convection freezing (NF), individual quick freezing (IQF), or cryogenic freezing (CF) techniques, followed by natural convection thawing (NCT) or running water thawing (RT). The meat was frozen until the core temperature reached -12℃ and then stored at -24℃, followed by thawing until the temperature reached 5℃. Quality parameters, such as the pH, water binding properties, CIE color, shear force, and microstructure of the beef were elucidated. Although the freezing and thawing combinations did not cause remarkable changes in the quality parameters, rapid freezing, in the order of CF, IQF, and NF, was found to minimize the quality deterioration. In the case of thawing methods, NCT was better than RT and the meat quality was influence on the thawing temperature rather than the thawing rate. Although the microstructure of the frozen beef exhibited an excessive loss of integrity after the freezing and thawing, it did not cause any remarkable change in the beef quality. Taken together, these results demonstrate that CF and NCT form the best combination for beef processing; however, IQF and NCT may have practical applications in the frozen food industry. PMID:26761674

The Impact of Global Warming on the Carbon Cycle of Arctic Permafrost: An Experimental and Field Based Study

DOE Office of Scientific and Technical Information (OSTI.GOV)

Onstott, Tullis C; Pffifner, Susan M; Chourey, Karuna

2014-11-07

Our results to date indicate that CO2 and CH4 fluxes from organic poor, Arctic cryosols on Axel Heiberg Island are net CH4 sinks and CO2 emitters in contrast to organic-rich peat deposits at sub-Arctic latitudes. This is based upon field observations and a 1.5 year long thawing experiment performed upon one meter long intact cores. The results of the core thawing experiments are in good agreement with field measurements. Metagenomic, metatranscriptomic and metaproteomic analyses indicate that high affinity aerobic methanotrophs belong to the uncultivated USCalpha are present in <1% abundance in these cryosols are are active in the field duringmore » the summer and in the core thawing experiments. The methanotrophs are 100 times more abundant than the methanogens. As a result mineral cryosols, which comprise 87% of Arctic tundra, are net methane sinks. Their presence and activity may account for the discrepancies observed between the atmospheric methane concentrations observed in the Arctic predicted by climate models and the observed seasonal fluctuations and decadal trends. This has not been done yet.« less

Anaerobic methanotrophic communities thrive in deep submarine permafrost.

PubMed

Winkel, Matthias; Mitzscherling, Julia; Overduin, Pier P; Horn, Fabian; Winterfeld, Maria; Rijkers, Ruud; Grigoriev, Mikhail N; Knoblauch, Christian; Mangelsdorf, Kai; Wagner, Dirk; Liebner, Susanne

2018-01-22

Thawing submarine permafrost is a source of methane to the subsurface biosphere. Methane oxidation in submarine permafrost sediments has been proposed, but the responsible microorganisms remain uncharacterized. We analyzed archaeal communities and identified distinct anaerobic methanotrophic assemblages of marine and terrestrial origin (ANME-2a/b, ANME-2d) both in frozen and completely thawed submarine permafrost sediments. Besides archaea potentially involved in anaerobic oxidation of methane (AOM) we found a large diversity of archaea mainly belonging to Bathyarchaeota, Thaumarchaeota, and Euryarchaeota. Methane concentrations and δ 13 C-methane signatures distinguish horizons of potential AOM coupled either to sulfate reduction in a sulfate-methane transition zone (SMTZ) or to the reduction of other electron acceptors, such as iron, manganese or nitrate. Analysis of functional marker genes (mcrA) and fluorescence in situ hybridization (FISH) corroborate potential activity of AOM communities in submarine permafrost sediments at low temperatures. Modeled potential AOM consumes 72-100% of submarine permafrost methane and up to 1.2 Tg of carbon per year for the total expected area of submarine permafrost. This is comparable with AOM habitats such as cold seeps. We thus propose that AOM is active where submarine permafrost thaws, which should be included in global methane budgets.

Application of Freezing and Thawing in Apple (Malus domestica) Juice Extraction.

PubMed

Nadulski, Rafał; Kobus, Zbigniew; Wilczyński, Kamil; Zawiślak, Kazimierz; Grochowicz, Józef; Guz, Tomasz

2016-09-28

The paper presents the results of the research on the impact of enzymatic liquefaction, freezing and thawing on the efficiency of juice pressure extraction from apple pulp and quality of the obtained juices. The research was conducted using three types of pretreatment prior the pressing: crushing and enzymatic liquefaction in temperature of 25 °C, crushing and enzymatic liquefaction in temperature of 45 °C and crushing followed by freezing and thawing of the pulp. The study included three varieties of apples. The juice was obtained using a laboratory basket press. It was determined that the pretreatment of the pulp as well as the varietal characteristics of the fruits have a significant impact on the efficiency of the pressure extraction process. The enzymatic treatment of the pulp, irrespective of the temperature at which it was conducted, significantly increased the efficiency of the process. No effect of the temperature (25 or 45 °C) of enzymatic treatment on the efficiency of the pressure extraction process was found. Pretreatment of the pulp based on freezing and thawing contributes to the increase of efficiency of pressing in the case of two apple cultivars, that is, Idared and Red Delicious. It was showed that total phenolic content, antioxidant activity, the soluble solids content and juice acidity (pH) depend on the pretreatment of the pulp and the varietal characteristics of apples. Following the application of pretreatment of the pulp, an increase was observed in the content of polyphenols and in the antioxidant activity of the juices obtained. © 2016 Institute of Food Technologists®

Leptin Improves Sperm Cryopreservation via Antioxidant Defense

PubMed Central

Fontoura, Paula; Mello, Mariana Duque; Gallo-Sá, Paulo; Erthal-Martins, Maria Cecília; Cardoso, Maria Cecília Almeida; Ramos, Cristiane

2017-01-01

Background: Leptin and its receptor are present in spermatozoa; however, the role of leptin in sperm function is still controversial. Our present study aimed at demonstrating the effect of cryopreservation on sperm DNA fragmentation (DNAf) and investigating the possible effects of sperm capacitation techniques and leptin in vitro incubation on frozen-thawed sperm DNAf and oxidative stress. Methods: Samples of 45 normospermic men attending for infertility investigation at Vida Centro de Fertilidade, Rio de Janeiro, Brazil, were frozen and thawed with or without capacitation and leptin incubation prior to freezing. Sperm DNA fragmentation was evaluated by Sperm Chromatin Dispersion Assay before and after cryopreservation and oxidative stress parameters were measured by spectrophotometry with and without leptin incubation. Statistical analysis was performed using paired t test to compare DNAf between groups before and after freeze-thaw cycle, to compare groups before and after capacitation and leptin incubation and oxidative measurements before and after leptin incubation. Statistical significance was considered when p≤0.05. Results: Our results revealed a significant post-thaw rise in sperm DNAf compared with fresh samples (p=0.0003). Sperm DNAf was significantly reduced when sperm capacitation was performed before freezing, when compared to those frozen with no previous capacitation (p=0.01). The addition of leptin to capacitated sperm before freezing reduced DNAf (p<0.0001) and enhanced superoxide dismutase (p=0.001) and glutathione peroxidase (p=0.02) antioxidant enzymes activity. Conclusion: The addition of leptin to capacitated sperm can improve sperm DNA quality following cryopreservation, possibly by inducing the activity of certain antioxidant enzymes. PMID:28377896

Nutrient Controls on Methane Emissions in a Permafrost Thaw Subarctic Peatland

NASA Astrophysics Data System (ADS)

Kashi, N. N.; Perryman, C. R.; Malhotra, A.; Marek, E. A.; Giesler, R.; Varner, R. K.

2015-12-01

Permafrost peatlands in northern latitudes are large reservoirs of sequestered carbon that are vulnerable to climate change. While peatlands account for a small fraction of total global land surfaces, their potential to release sequestered carbon in response to higher temperatures is of concern. Of particular relevance is the conversion of these carbon stores into methane (CH4), a strong greenhouse gas with a global warming potential 20 times greater than that of CO2 over a 100-year time frame. Here, we explore how key nutrients impact the consumption of CH4 at the Stordalen Mire in Abisko, Sweden, a discontinuous permafrost peatland with expanding thaw over the last century. Peatland CH4 emissions are highly spatially variable due to multiple emission pathways and strong dependence on several environmental factors. Among controls on CH4 emissions, such as temperature and water table depth, primary production of wetland vegetation is also a strong factor in the variability of CH4 emissions. Plant community shifts among permafrost thaw stages subsequently change nutrient cycling and availability, which in turn impacts primary production. Early stages of permafrost thaw are mosaicked with a variety of vascular plants and mosses. We analyzed potential enzymatic activities of chitinase, glucosidase, and phosphatase as proxies for organic nitrogen, carbon, and phosphorus cycling, respectively, in tandem with potential CH4 oxidation rates. In addition, stoichiometric ratios of carbon, nitrogen, and phosphorus concentrations are used to illustrate nutrient limitation controls on CH4 oxidation rates. While CH4 emissions are low throughout initial thaw stages, < 7 CH4 mg m-2 day-1, we found they had the highest rates of potential CH4 oxidation. These permafrost thaw-induced CH4 oxidation rates are 5 and 11 times higher, in the surface and depth of the peat profile respectively, than subsequent aerobic permafrost thaw stages. As CH4 emissions are low in intact permafrost peatlands, these high rates of potential CH4 oxidation indicate the importance of plant communities and the methanotrophic microbes they harbor.

The development of the cell cryopreservation protocol with controlled rate thawing.

PubMed

Gurina, Tatyana M; Pakhomov, Alexandr V; Polyakova, Anna L; Legach, Evgeniy I; Bozhok, Galyna A

2016-06-01

Thawing in the water bath is often considered as a standard procedure. The thermal history of samples thawed in this way is poorly controlled, but cryopreservation and banking of cell-based products require standardization, automation and safety of all the technological stages including thawing. The programmable freezers allow implementation of the controlled cooling as well as the controlled thawing. As the cell damage occurs during the phase transformation that takes place in the cryoprotectant medium in the process of freezing-thawing, the choice of warming rates within the temperature intervals of transformations is very important. The goal of the study was to investigate the influence of warming rates within the intervals of the phase transformations in the DMSO-based cryoprotectant medium on the cell recovery and to develop a cryopreservation protocol with controlled cooling and warming rates. The temperature intervals of phase transformations such as melting of the eutectic mixture of the cryoprotectant solution (MEMCS), melting of the eutectic salt solution (MESS), melting of the main ice mass (MMIM), recrystallization before MEMCS, recrystallization before MESS and recrystallization before MMIM were determined by thermo-mechanical analysis. The biological experiments were performed on the rat testicular interstitial cells (TIC). The highest levels of the cell recovery and metabolic activity after cryopreservation were obtained using the protocol with the high (20 °C/min) warming rate in the temperature intervals of crystallization of the eutectics as well as recrystallizations and the low (1 °C/min) warming rate in the temperature intervals of melting of the eutectics as well as MMIM. The total cell recovery was 65.3 ± 2.1 %, the recovery of the 3-beta-HSD-positive (Leydig) cells was 82.9 ± 1.8 %, the MTT staining was 32.5 ± 0.9 % versus 42.1 ± 1.7 %; 57.4 ± 2.1 % and 24.0 ± 1.1 % respectively, when compared to the thawing in the water bath.

Cryopreservation of Iberian pig spermatozoa. Comparison of different freezing extenders based on post-thaw sperm quality.

PubMed

De Mercado, Eduardo; Rodríguez, Ana; Gómez, Emilio; Sanz, Elena

2010-03-01

The aim of this study was to evaluate the cryoprotective effect of different freezing extenders against cryopreservation injuries on Iberian boar sperm. The sperm-rich fraction was collected and pooled from six sexually mature Iberian boars, and was frozen in different extenders containing glucose, lactose or fructose as sugar source and including Orvus ES Paste only in the freezing extender-2 (Glucose; Lactose and Fructose) or in both freezing extenders (Glucose2; Lactose2 and Fructose2). During the cryopreservation process, the supernatant was removed after the centrifugation step, then was extended with freezing extender-1 for the equilibration period and with freezing extender-2 immediately before freezing. Post-thaw sperm characteristics, such as plasma membrane integrity (SYBR-14/PI), mitochondrial function (Rhodamine 123) and acrosome integrity (NAR), were monitored. Overall sperm motility and the individual kinematic parameters of motile spermatozoa (assessed by the computer-aided sperm analysis system Sperm Class Analyzer [SCA]) were recorded in the different experimental treatments. Measurements were taken at 30 and 150 min post-thaw. The state of the acrosome after thawing did not show significant differences between the freezing extenders studied. Freezing-thawing caused a significant decrease (P<0.001) in plasma membrane integrity and in mitochondrial activity in the spermatozoa frozen with Orvus ES Paste in both freezing extenders. Furthermore, spermatozoa frozen with Orvus ES Paste in both freezing extenders exhibited lower (P<0.05) motility and kinematic parameters than those frozen in the absence of Orvus ES Paste in the first freezing extender. The spermatozoa frozen with the Lactose extender and with Orvus ES Paste only in the second freezing extender showed a better evolution of the motility and kinematic characteristics (P<0.05) over time. The deterioration in post-thaw sperm motility and kinematic parameters were concurrent with reduced sperm characteristics. It can be suggested that in the Iberian pig, the beneficial effects of Orvus ES Paste during the freezing process of spermatozoa is time dependent. The analysis of different sperm characteristics such as motility, plasma membrane integrity and mitochondrial function, determined that the extenders studied in the present experiment affected the quality of frozen-thawed semen in Iberian boar.

Early thawing after snow removal and no straw mulching accelerates organic carbon cycling in a paddy soil in Northeast China.

PubMed

Zhang, Hao; Tang, Jie; Liang, Shuang; Li, Zhaoyang; Wang, Jingjing; Wang, Sining

2018-03-01

Variations in soil organic carbon (SOC) have implications for atmospheric CO 2 concentrations and the greenhouse effect. However, the effects of snow cover and straw mulching on the variations in SOC fractions across winter remain largely unknown. In this study, soil samples were collected during different stages of winter from an in situ experiment comprising three treatments: 1) snow removal with no straw mulching (Sn-SM-); 2) snow cover with no straw mulching (SC), and; 3) snow cover with straw mulching (SC + SM+). Results showed that labile organic carbon, semi-labile organic carbon, recalcitrant organic carbon (ROC), the light fraction of organic carbon (LFOC), and easily oxidized organic carbon (EOC) contents did not vary significantly (P > .05) during the unfrozen to hard frost stages. Compared to the unfrozen stage, microbial biomass carbon (MBC) contents decreased by 519.03 mg kg -1 , 325.21 mg kg -1 , and 244.09 mg kg -1 and dissolved organic carbon (DOC) contents increased by 473.36 mg kg -1 , 348.10 mg kg -1 , and 258.89 mg kg -1  at the hard frost stage in Sn-SM-, SC, and SC + SM + treatments, respectively. Throughout all thawing stages, > 61% and 59% of SOC and ROC accumulation, respectively in the three treatments were observed in thawing stage II, indicating that higher temperatures and microbial activities in thawing stage II accelerated the inputs of SOC and ROC. ROC accumulation accounted for >65% of the SOC accumulation and the proportions of ROC in SOC increased in the three treatments during the thawing stages. SC + SM + treatment maintained lower EOC contents during thawing stages than other treatments. The observation of lowest SOC and LFOC accumulation and contents in the SC + SM + treatment during thawing stages showed that SC + SM + experienced the least inputs of SOC in the soil. Copyright © 2018 Elsevier Ltd. All rights reserved.

Retained fertilizing capability in cryopreserved feline spermatozoa.

PubMed

Chatdarong, K

2017-04-01

Sperm cryopreservation offers a long-term preservation of male genetic materials for future assisted reproductive technologies. However, dramatic changes in temperature during freezing and thawing injure sperm cells. While motility is essential for AI and membrane integrity is crucial for in vitro fertilization (IVF), sperm DNA integrity is a common index of fertilizing capability required for AI, IVF and intracytoplasmic sperm injection (ICSI). In endangered felids died unexpectedly, attempts have been made to recover as many DNA intact spermatozoa as possible from epididymis and testis to increase the opportunity to produce offspring in future. Although sperm from caudal epididymis has shown retained fertilizing capability after freezing and thawing (27.3% conception rate after unilateral intrauterine insemination), sperm recovery from the corpus epididymis has been suggested as an alternative to increase the amount of preserved genetic materials. To improve epididymal sperm quality, pre-treatment with single-layer centrifugation resulted in selection of sperm cells with intact DNA while post-thaw treatment with extracellular ATP incubation promoted the blastocyst rate. Cold storage of domestic cat testis for 7 days at 4°C demonstrated <1% of sperm cells with fragmented DNA. Moreover, isolated testicular sperm cells, stored for 7 days at 4°C, produced after ICSI poorer percentages of cleavage, morula and blastocyst than the fresh control. In wild felids, a death-to-necropsy time of 2 hr after a jungle cat (Felis chaus) aged 10 years died during anaesthesia plus another necropsy-to-sperm recovery time of 25 hr has been reported to yield the post-thawed testicular sperm with 22.2% intact DNA. In summary, the chromatin structure of feline ejaculated and epididymal sperm seems to be tolerated to cold storage and cryopreservation; thus, fertilizing capability is well protected. In contrast, the cat testicular sperm DNA is generally damaged through the cryopreservation. © 2016 Blackwell Verlag GmbH.

Using field observations to inform thermal hydrology models of permafrost dynamics with ATS (v0.83)

DOE PAGES

Atchley, A. L.; Painter, S. L.; Harp, D. R.; ...

2015-04-14

Climate change is profoundly transforming the carbon-rich Arctic tundra landscape, potentially moving it from a carbon sink to a carbon source by increasing the thickness of soil that thaws on a seasonal basis. However, the modeling capability and precise parameterizations of the physical characteristics needed to estimate projected active layer thickness (ALT) are limited in Earth System Models (ESMs). In particular, discrepancies in spatial scale between field measurements and Earth System Models challenge validation and parameterization of hydrothermal models. A recently developed surface/subsurface model for permafrost thermal hydrology, the Advanced Terrestrial Simulator (ATS), is used in combination with field measurementsmore » to calibrate and identify fine scale controls of ALT in ice wedge polygon tundra in Barrow, Alaska. An iterative model refinement procedure that cycles between borehole temperature and snow cover measurements and simulations functions to evaluate and parameterize different model processes necessary to simulate freeze/thaw processes and ALT formation. After model refinement and calibration, reasonable matches between simulated and measured soil temperatures are obtained, with the largest errors occurring during early summer above ice wedges (e.g. troughs). The results suggest that properly constructed and calibrated one-dimensional thermal hydrology models have the potential to provide reasonable representation of the subsurface thermal response and can be used to infer model input parameters and process representations. The models for soil thermal conductivity and snow distribution were found to be the most sensitive process representations. However, information on lateral flow and snowpack evolution might be needed to constrain model representations of surface hydrology and snow depth.« less

Dissolved organic matter composition of Arctic rivers: Linking permafrost and parent material to riverine carbon

USGS Publications Warehouse

O’Donnell, Jonathan A.; Aiken, George R.; Swanson, David K.; Santosh, Panda; Butler, Kenna D.; Baltensperger, Andrew P.

2016-01-01

Recent climate change in the Arctic is driving permafrost thaw, which has important implications for regional hydrology and global carbon dynamics. Permafrost is an important control on groundwater dynamics and the amount and chemical composition of dissolved organic matter (DOM) transported by high-latitude rivers. The consequences of permafrost thaw for riverine DOM dynamics will likely vary across space and time, due in part to spatial variation in ecosystem properties in Arctic watersheds. Here we examined watershed controls on DOM composition in 69 streams and rivers draining heterogeneous landscapes across a broad region of Arctic Alaska. We characterized DOM using bulk dissolved organic carbon (DOC) concentration, optical properties, and chemical fractionation and classified watersheds based on permafrost characteristics (mapping of parent material and ground ice content, modeling of thermal state) and ecotypes. Parent material and ground ice content significantly affected the amount and composition of DOM. DOC concentrations were higher in watersheds underlain by fine-grained loess compared to watersheds underlain by coarse-grained sand or shallow bedrock. DOC concentration was also higher in rivers draining ice-rich landscapes compared to rivers draining ice-poor landscapes. Similarly, specific ultraviolet absorbance (SUVA254, an index of DOM aromaticity) values were highest in watersheds underlain by fine-grained deposits or ice-rich permafrost. We also observed differences in hydrophobic organic acids, hydrophilic compounds, and DOM fluorescence across watersheds. Both DOC concentration and SUVA254 were negatively correlated with watershed active layer thickness, as determined by high-resolution permafrost modeling. Together, these findings highlight how spatial variations in permafrost physical and thermal properties can influence riverine DOM.

Thermal regime of an ice-wedge polygon landscape near Barrow, Alaska

NASA Astrophysics Data System (ADS)

Daanen, R. P.; Liljedahl, A. K.

2017-12-01

Tundra landscapes are changing all over the circumpolar Arctic due to permafrost degradation. Soil cracking and infilling of meltwater repeated over thousands of years form ice wedges, which produce the characteristic surface pattern of ice-wedge polygon tundra. Rapid top-down thawing of massive ice leads to differential ground subsidence and sets in motion a series of short- and long-term hydrological and ecological changes. Subsequent responses in the soil thermal regime drive further permafrost degradation and/or stabilization. Here we explore the soil thermal regime of an ice-wedge polygon terrain near Utqiagvik (formerly Barrow) with the Water balance Simulation Model (WaSiM). WaSiM is a hydro-thermal model developed to simulate the water balance at the watershed scale and was recently refined to represent the hydrological processes unique to cold climates. WaSiM includes modules that represent surface runoff, evapotranspiration, groundwater, and soil moisture, while active layer freezing and thawing is based on a direct coupling of hydrological and thermal processes. A new snow module expands the vadose zone calculations into the snow pack, allowing the model to simulate the snow as a porous medium similar to soil. Together with a snow redistribution algorithm based on local topography, this latest addition to WaSiM makes simulation of the ground thermal regime much more accurate during winter months. Effective representation of ground temperatures during winter is crucial in the simulation of the permafrost thermal regime and allows for refined predictions of future ice-wedge degradation or stabilization.

Understory vegetation mediates permafrost active layer dynamics and carbon dioxide fluxes in open-canopy larch forests of northeastern Siberia.

PubMed

Loranty, Michael M; Berner, Logan T; Taber, Eric D; Kropp, Heather; Natali, Susan M; Alexander, Heather D; Davydov, Sergey P; Zimov, Nikita S

2018-01-01

Arctic ecosystems are characterized by a broad range of plant functional types that are highly heterogeneous at small (~1-2 m) spatial scales. Climatic changes can impact vegetation distribution directly, and also indirectly via impacts on disturbance regimes. Consequent changes in vegetation structure and function have implications for surface energy dynamics that may alter permafrost thermal dynamics, and are therefore of interest in the context of permafrost related climate feedbacks. In this study we examine small-scale heterogeneity in soil thermal properties and ecosystem carbon and water fluxes associated with varying understory vegetation in open-canopy larch forests in northeastern Siberia. We found that lichen mats comprise 16% of understory vegetation cover on average in open canopy larch forests, and lichen abundance was inversely related to canopy cover. Relative to adjacent areas dominated by shrubs and moss, lichen mats had 2-3 times deeper permafrost thaw depths and surface soils warmer by 1-2°C in summer and less than 1°C in autumn. Despite deeper thaw depths, ecosystem respiration did not differ across vegetation types, indicating that autotrophic respiration likely dominates areas with shrubs and moss. Summertime net ecosystem exchange of CO2 was negative (i.e. net uptake) in areas with high shrub cover, while positive (i.e. net loss) in lichen mats and areas with less shrub cover. Our results highlight relationships between vegetation and soil thermal dynamics in permafrost ecosystems, and underscore the necessity of considering both vegetation and permafrost dynamics in shaping carbon cycling in permafrost ecosystems.

A Regional, Integrated Monitoring System for the Hydrology of the Pan-Arctic Land Mass

NASA Technical Reports Server (NTRS)

Serreze, Mark; Barry, Roger; Nolin, Anne; Armstrong, Richard; Zhang, Ting-Jung; Vorosmarty, Charles; Lammers, Richard; Frolking, Steven; Bromwich, David; McDonald, Kyle

2005-01-01

Work under this NASA contract developed a system for monitoring and historical analysis of the major components of the pan-Arctic terrestrial water cycle. It is known as Arctic-RIMS (Regional Integrated Hydrological Monitoring System for the Pan-Arctic Landmass). The system uses products from EOS-era satellites, numerical weather prediction models, station records and other data sets in conjunction with an atmosphere-land surface water budgeting scheme. The intent was to compile operational (at 1-2 month time lags) gridded fields of precipitation (P), evapotranspiration (ET), P-ET, soil moisture, soil freeze/thaw state, active layer thickness, snow extent and its water equivalent, soil water storage, runoff and simulated discharge along with estimates of non-closure in the water budget. Using "baseline" water budgeting schemes in conjunction with atmospheric reanalyses and pre-EOS satellite data, water budget fields were conjunction with atmospheric reanalyses and pre-EOS satellite data, water budget fields were compiled to provide historical time series. The goals as outlined in the original proposal can be summarized as follows: 1) Use EOS data to compile hydrologic products for the pan-Arctic terrestrial regions including snowcover/snow water equivalent (SSM/A MODIS, AMSR) and near-surface freeze/thaw dynamics (Sea Winds on QuikSCAT and ADEOS I4 SSMI and AMSR). 2) Implement Arctic-RIMS to use EOS data streams, allied fields and hydrologic models to produce allied outputs that fully characterize pan-Arctic terrestrial and aerological water budgets. 3) Compile hydrologically-based historical products providing a long-term baseline of spatial and temporal variability in the water cycle.

Interannual and Seasonal Patterns of Carbon Dioxide, Water, and Energy Fluxes From Ecotonal and Thermokarst-Impacted Ecosystems on Carbon-Rich Permafrost Soils in Northeastern Siberia

NASA Astrophysics Data System (ADS)

Euskirchen, Eugénie S.; Edgar, Colin W.; Syndonia Bret-Harte, M.; Kade, Anja; Zimov, Nikita; Zimov, Sergey

2017-10-01

Eastern Siberia Russia is currently experiencing a distinct and unprecedented rate of warming. This change is particularly important given the large amounts of carbon stored in the yedoma permafrost soils that become vulnerable to thaw and release under warming. Data from this region pertaining to year-round carbon, water, and energy fluxes are scarce, particularly in sensitive ecotonal ecosystems near latitudinal treeline, as well as those already impacted by permafrost thaw. Here we investigated the interannual and seasonal carbon dioxide, water, and energy dynamics at an ecotonal forested site and a disturbed thermokarst-impacted site. The ecotonal site was approximately neutral in terms of CO2 uptake/release, while the disturbed site was either a source or neutral. Our data suggest that high rates of plant productivity during the growing season at the disturbed site may, in part, counterbalance higher rates of respiration during the cold season compared to the ecotonal site. We also found that the ecotonal site was sensitive to the timing of the freezeup of the soil active layer in fall, releasing more CO2 when freezeup occurred later. Both sites showed a negative water balance, although the ecotonal site appeared more sensitive to dry conditions. Water use efficiency at the ecotonal site was lower during warmer summers. Overall, these Siberian measurements indicate ecosystem sensitivity to warmer conditions during the fall and to drier conditions during the growing season and provide a better understanding of ecosystem response to climate in a part of the circumpolar Arctic where current knowledge is weakest.

Comparative analysis of prodigiosin isolated from endophyte Serratia marcescens.

PubMed

Khanam, B; Chandra, R

2018-03-01

Extraction of pigments from endophytes is an uphill task. Up till now, there are no efficient methods available to extract the maximum amount of prodigiosin from Serratia marcescens. This is one of the important endophytes of Beta vulgaris L. The present work was carried out for the comparative study of six different extraction methods such as homogenization, ultrasonication, freezing and thawing, heat treatment, organic solvents and inorganic acids to evaluate the efficiency of prodigiosin yield. Our results demonstrated that highest extraction was observed in ultrasonication (98·1 ± 1·7%) while the lowest extraction by freezing and thawing (31·8 ± 3·8%) methods. However, thin layer chromatography, high-performance liquid chromatography and Fourier transform infrared data suggest that bioactive pigment in the extract was prodigiosin. To the best of our knowledge, this is the first comprehensive study of extraction methods and identification and purification of prodigiosin from cell biomass of Ser. marcescens isolated from Beta vulgaris L. The prodigiosin family is a potent drug with anticancer, antimalarial, antibacterial, antifungal, antiproliferative and immunosuppressive activities. Moreover, it has immense potential in pharmaceutical, food and textile industries. For the industrial perspective, it is essential to achieve purified, high yield and cost-effective extraction of prodigiosin. To the best of our knowledge, this is the first comprehensive study on prodigiosin extraction and also the first report on endophyte Serratia marcescens isolated from Beta vulgaris L. The significance of our results is to extract high amount and good quality prodigiosin for commercial application. © 2017 The Society for Applied Microbiology.

Numerical Simulation of Thawing Process of Biological Tissue

NASA Astrophysics Data System (ADS)

Momose, Noboru; Tada, Yukio; Hayashi, Yujiro

Heat transfer and simplified physicochemical model for thawing of the frozen biological cell element consisting of cell and extracellular region was proposed. The melting of intra-and extra-cellular ice, the water transport through cell membrane and other microscale behavior during thawing process were discussed as a function of temperature. Recovery of the cell volume and change of osmotic pressure difference during thawing were clarified theortically in connection with heating velocity, initial cell volume and membrane permeability. Extending this model, the thawing of cellular tissue consisted of numerous cell elements was also simulated. There was a position where osmotic pressure difference became maximum during thawing. Summarizing these results, the thawing damage due to osmotic stress was discussed in relation with the heating operation and the size effect of tissue.

Research on strength attenuation law of concrete in freezing - thawing environment

NASA Astrophysics Data System (ADS)

Xiao, qianhui; Cao, zhiyuan; Li, qiang

2018-03-01

By rapid freezing and thawing method, the experiments of concrete have been 300 freeze-thaw cycles specimens in the water. The cubic compression strength value under different freeze-thaw cycles was measured. By analyzing the test results, the water-binder ratio of the concrete under freeze-thaw environments, fly ash and air entraining agent is selected dosage recommendations. The exponential attenuation prediction model and life prediction model of compression strength of concrete under freezing-thawing cycles considering the factors of water-binder ratio, fly ash content and air-entraining agent dosage were established. The model provides the basis for predicting the durability life of concrete under freezing-thawing environment. It also provides experimental basis and references for further research on concrete structures with antifreeze requirements.

Experimental research on durability of recycled aggregate concrete under freeze- thaw cycles

NASA Astrophysics Data System (ADS)

Cheng, Yanqiu; Shang, Xiaoyu; Zhang, Youjia

2017-07-01

The freeze-thaw durability of recycled aggregate concrete has significance for the concrete buildings in the cold region. In this paper, the rapid freezing and thawing cycles experience on recycle aggregate concrete was conducted to study on the effects of recycle aggregate amount, water-binder ratio and fly ash on freeze-thaw durability of recycle aggregate concrete. The results indicates that recycle aggregate amount makes the significant influence on the freeze-thaw durability. With the increase of recycled aggregates amount, the freeze-thaw resistance for recycled aggregate concrete decreases. Recycled aggregate concrete with lower water cement ratio demonstrates better performance of freeze-thaw durability. It is advised that the amount of fly ash is less than 30% for admixture of recycled aggregates in the cold region.

  Ultrasonic monitoring of fish thawing process optimal time of thawing and effect of freezing/thawing.

PubMed

El Kadi, Youssef Ait; Moudden, Ali; Faiz, Bouazza; Maze, Gerard; Decultot, Dominique

2013-01-01

Fish quality is traditionally controlled by chemical and microbiological analysis. The non-destructive control presents an enormous professional interest thanks to the technical contribution and precision of the analysis to which it leads. This paper presents the results obtained from a characterisation of fish thaw-ing process by the ultrasonic technique, with monitoring thermal processing from frozen to defrosted states. The study was carried out on fish type red drum and salmon cut into fillets of 15 mm thickness. After being frozen at -20°C, the sample is enclosed in a plexiglas vessel with parallel walls at the ambient temperature 30°C and excited in perpendicular incidence at 0.5 MHz by an ultrasonic pulser-receiver Sofranel 5052PR. the technique of measurement consists to study the signals reflected by fish during its thawing, the specific techniques of signal processing are implemented to deduce informations characterizing the state of fish and its thawing process by examining the evolution of the position echoes reflected by the sample and the viscoelastic parameters of fish during its thawing. The obtained results show a relationship between the thermal state of fish and its acoustic properties, which allowed to deduce the optimal time of the first thawing in order to restrict the growth of microbial flora. For salmon, the results show a decrease of 36% of the time of the second thawing and an increase of 10.88% of the phase velocity, with a decrease of 65.5% of the peak-to-peak voltage of the signal reflected, thus a decrease of the acoustic impedance. This study shows an optimal time and an evolution rate of thawing specific to each type offish and a correlation between the acoustic behavior of fish and its thermal state which approves that this technique of ultrasonic monitoring can substitute the control using the destructive chemical analysis in order to monitor the thawing process and to know whether a fish has suffered an accidental thawing.

Prediction of Quality Change During Thawing of Frozen Tuna Meat by Numerical Calculation I

NASA Astrophysics Data System (ADS)

Murakami, Natsumi; Watanabe, Manabu; Suzuki, Toru

A numerical calculation method has been developed to determine the optimum thawing method for minimizing the increase of metmyoglobin content (metMb%) as an indicator of color changes in frozen tuna meat during thawing. The calculation method is configured the following two steps: a) calculation of temperature history in each part of frozen tuna meat during thawing by control volume method under the assumption of one-dimensional heat transfer, and b) calculation of metMb% based on the combination of calculated temperature history, Arrenius equation and the first-order reaction equation for the increase rate of metMb%. Thawing experiments for measuring temperature history of frozen tuna meat were carried out under the conditions of rapid thawing and slow thawing to compare the experimental data with calculated temperature history as well as the increase of metMb%. The results were coincident with the experimental data. The proposed simulation method would be useful for predicting the optimum thawing conditions in terms of metMb%.

Recent developments in novel freezing and thawing technologies applied to foods.

PubMed

Wu, Xiao-Fei; Zhang, Min; Adhikari, Benu; Sun, Jincai

2017-11-22

This article reviews the recent developments in novel freezing and thawing technologies applied to foods. These novel technologies improve the quality of frozen and thawed foods and are energy efficient. The novel technologies applied to freezing include pulsed electric field pre-treatment, ultra-low temperature, ultra-rapid freezing, ultra-high pressure and ultrasound. The novel technologies applied to thawing include ultra-high pressure, ultrasound, high voltage electrostatic field (HVEF), and radio frequency. Ultra-low temperature and ultra-rapid freezing promote the formation and uniform distribution of small ice crystals throughout frozen foods. Ultra-high pressure and ultrasound assisted freezing are non-thermal methods and shorten the freezing time and improve product quality. Ultra-high pressure and HVEF thawing generate high heat transfer rates and accelerate the thawing process. Ultrasound and radio frequency thawing can facilitate thawing process by volumetrically generating heat within frozen foods. It is anticipated that these novel technologies will be increasingly used in food industries in the future.

Dispersion Stability of O/W Emulsions with Different Oil Contents Under Various Freezing and Thawing Conditions.

PubMed

Katsuki, Kazutaka; Miyagawa, Yayoi; Nakagawa, Kyuya; Adachi, Shuji

2017-07-01

Freezing and thawing of oil-in-water (O/W) emulsion-type foods bring about oil-water separation and deterioration; hence, the effects of freezing and thawing conditions on the destabilization of O/W emulsions were examined. The freezing rate and thawing temperature hardly affected the stability of the O/W emulsion. O/W emulsions having different oil fractions were stored at temperatures ranging from -30 to -20 °C and then thawed. The stability after thawing depended on the storage temperature, irrespective of the oil fraction of the emulsion. A good correlation was found between the time at which the stability began to decrease and the time taken for the oil to crystalize. These results indicated that the dominant cause for the destabilization of the O/W emulsion during freezing and thawing is the crystallization of the oil phase and that the effects of the freezing and thawing rates on the stability are insignificant. © 2017 Institute of Food Technologists®.

Repeated freeze-thaw cycles induce embolism in drought stressed conifers (Norway spruce, stone pine).

PubMed

Mayr, Stefan; Gruber, Andreas; Bauer, Helmut

2003-07-01

Freezing and thawing lead to xylem embolism when gas bubbles caused by ice formation expand during the thaw process. However, previous experimental studies indicated that conifers are resistant to freezing-induced embolism, unless xylem pressure becomes very negative during the freezing. In this study, we show that conifers experienced freezing-induced embolism when exposed to repeated freeze-thaw cycles and simultaneously to drought. Simulating conditions at the alpine timberline (128 days with freeze-thaw events and thawing rates of up to 9.5 K h(-1) in the xylem of exposed twigs during winter), young trees of Norway spruce [Picea abies (L.) Karst.] and stone pine (Pinus cembra L.) were exposed to 50 and 100 freeze-thaw cycles. This treatment caused a significant increase in embolism rates in drought-stressed samples. Upon 100 freeze-thaw cycles, vulnerability thresholds (50% loss of conductivity) were shifted 1.8 MPa (Norway spruce) and 0.8 MPa (stone pine) towards less negative water potentials. The results demonstrate that freeze-thaw cycles are a possible reason for winter-embolism in conifers observed in several field studies. Freezing-induced embolism may contribute to the altitudinal limits of conifers.

The hemostatic activity of cryopreserved platelets is mediated by phosphatidylserine-expressing platelets and platelet microparticles.

PubMed

Johnson, Lacey; Coorey, Craig P; Marks, Denese C

2014-08-01

Cryopreservation of platelets (PLTs) at -80°C with dimethyl sulfoxide (DMSO) can extend the shelf life from 5 days to 2 years. Cryopreserved PLTs are reported to have a greater in vivo hemostatic effect than liquid-stored PLTs. As such, the aim of this study was to understand the mechanisms responsible for the hemostatic potential of cryopreserved PLTs and the contribution of the reconstitution solution to this activity. DMSO (5% final concentration) was added to buffy coat-derived PLTs, followed by prefreeze removal of DMSO and storage at -80°C. Cryopreserved PLTs (n=8 per group) were thawed at 37°C, reconstituted with either 1 unit of thawed frozen plasma or PLT additive solution (PAS-G). In vitro assays were performed before freezing and after thawing to assess the hemostatic activity of PLTs. Cryopreserved PLTs expressed high levels of phosphatidylserine and contained significantly more phosphatidylserine-positive PLT microparticles than liquid-stored PLTs. This was accompanied by a significant decrease in the time to clot formation and clot strength, as measured by thromboelastography. The supernatant from cryopreserved PLTs was sufficient to reduce the phosphatidylserine-dependent clotting time and increase the thrombin generation potential. Overall, plasma-reconstituted cryopreserved PLTs were more procoagulant than those reconstituted in PAS-G. PLT cryopreservation results in the generation of phosphatidylserine-expressing PLT microparticles which contribute to the hemostatic activity. Understanding the hemostatic activity of these components may assist in extending the use of these specialized components beyond military applications. © 2014 Australian Red Cross Blood Service. Transfusion © 2014 AABB.

Acceleration of thaw slump activity in glaciated landscapes of the Western Canadian Arctic

NASA Astrophysics Data System (ADS)

Segal, Rebecca A.; Lantz, Trevor C.; Kokelj, Steven V.

2016-03-01

Climate change is increasing the frequency and intensity of thermokarst, but the influences of regional climate and physiography remain poorly understood. Retrogressive thaw slumping is one of the most dynamic forms of thermokarst and affects many areas of glaciated terrain across northwestern Canada. In this study, we used airphotos and satellite imagery to investigate the influence of climate and landscape factors on thaw slump dynamics. We assessed slump size, density, and growth rates in four regions of ice-rich terrain with contrasting climate and physiographic conditions: the Jesse Moraine, the Tuktoyaktuk Coastlands, the Bluenose Moraine, and the Peel Plateau. Observed increases in: (1) the area impacted by slumps (+2 to +407%), (2) average slump sizes (+0.31 to +1.82 ha), and (3) slump growth rates (+169 to +465 m2 yr-1) showed that thermokarst activity is rapidly accelerating in ice-rich morainal landscapes in the western Canadian Arctic, where slumping has become a dominant driver of geomorphic change. Differences in slump characteristics among regions indicate that slump development is strongly influenced by topography, ground ice conditions, and Quaternary history. Observed increases in slump activity occurred in conjunction with increases in air temperature and precipitation, but variation in slump activity among the four regions suggests that increased precipitation has been an important driver of change. Our observation that the most rapid intensification of slump activity occurred in the coldest environment (the Jesse Moraine on Banks Island) indicates that ice-cored landscapes in cold permafrost environments are highly vulnerable to climate change.

Shifted energy fluxes, increased Bowen ratios, and reduced thaw depths linked with drainage-induced changes in permafrost ecosystem structure

NASA Astrophysics Data System (ADS)

Göckede, Mathias; Kittler, Fanny; Kwon, Min Jung; Burjack, Ina; Heimann, Martin; Kolle, Olaf; Zimov, Nikita; Zimov, Sergey

2017-12-01

Hydrologic conditions are a key factor in Arctic ecosystems, with strong influences on ecosystem structure and related effects on biogeophysical and biogeochemical processes. With systematic changes in water availability expected for large parts of the northern high-latitude region in the coming centuries, knowledge on shifts in ecosystem functionality triggered by altered water levels is crucial for reducing uncertainties in climate change predictions. Here, we present findings from paired ecosystem observations in northeast Siberia comprising a drained and a control site. At the drainage site, the water table has been artificially lowered by up to 30 cm in summer for more than a decade. This sustained primary disturbance in hydrologic conditions has triggered a suite of secondary shifts in ecosystem properties, including vegetation community structure, snow cover dynamics, and radiation budget, all of which influence the net effects of drainage. Reduced thermal conductivity in dry organic soils was identified as the dominating drainage effect on energy budget and soil thermal regime. Through this effect, reduced heat transfer into deeper soil layers leads to shallower thaw depths, initially leading to a stabilization of organic permafrost soils, while the long-term effects on permafrost temperature trends still need to be assessed. At the same time, more energy is transferred back into the atmosphere as sensible heat in the drained area, which may trigger a warming of the lower atmospheric surface layer.

Evaluation of Physicochemical Deterioration and Lipid Oxidation of Beef Muscle Affected by Freeze-thaw Cycles

PubMed Central

Rahman, M. H.; Hossain, M. M.; Rahman, S. M. E.; Amin, M. R.; Oh, Deog-Hwan

2015-01-01

This study was performed to explore the deterioration of physicochemical quality of beef hind limb during frozen storage at −20℃, affected by repeated freeze-thaw cycles. The effects of three successive freeze-thaw cycles on beef hind limb were investigated comparing with unfrozen beef muscle for 80 d by keeping at −20±1℃. The freeze-thaw cycles were subjected to three thawing methods and carried out to select the best one on the basis of deterioration of physicochemical properties of beef. As the number of repeated freeze-thaw cycles increased, drip loss decreased and water holding capacity (WHC) increased (p<0.05) till two cycles and then decreased. Cooking loss increased in cycle one and three but decreased in cycle two. Moreover, drip loss, WHC and cooking loss affected (p<0.05) by thawing methods within the cycles. However, pH value decreased (p<0.05), but peroxide value (p<0.05), free fatty acids value (p<0.05) and TBARS value increased (p<0.05) significantly as the number of repeated freeze-thaw cycles increased. Moreover, significant (p<0.05) interactive effects were found among the thawing methods and repeated cycles. As a result, freeze-thaw cycles affected the physicochemical quality of beef muscle, causing the degradation of its quality. PMID:26877637

A simple, field-friendly technique for cryopreserving semen from Asian elephants (Elephas maximus).

PubMed

Arnold, Danielle M; Gray, Charlie; Roth, Terri L; Mitchell, Sebastian; Graham, Laura H

2017-07-01

The specific objectives of the present study were to investigate the effects of manual seeding, differing freeze and thaw rates as well as storage for 24h at 4°C prior to cryopreservation on post-thaw sperm quality in Asian elephants. Extended semen was cooled in an equitainer to 4°C, frozen in liquid nitrogen vapour at various rates with and without manual seeding or in a dry shipper and thawed at 37, 50 and 75°C. There was a significant effect of freeze rate on post-thaw motility (P<0.0001) and acrosomal integrity (P<0.005). The faster freeze rates in the dry shipper and at 1cm or 2cm above liquid nitrogen consistently provided better cryopreservation than slower freezing rates. Thaw temperature had no effect on post-thaw semen quality but there was an interaction between freeze and thaw rates with higher thaw rates resulting in superior post-thaw semen quality in straws frozen at fast rates. Storage of samples prior to freezing had a detrimental effect on post-thaw semen quality. In summary, our results indicate cooling extended semen in an equitainer and cryopreserving it by placing straws directly in a dry shipper is a simple technique for effectively cryopreserving Asian elephant semen in the field or zoo. Copyright © 2017 Elsevier B.V. All rights reserved.

Quality Evaluation of Pork with Various Freezing and Thawing Methods

PubMed Central

2014-01-01

In this study, the physicochemical and sensory quality characteristics due to the influence of various thawing methods on electro-magnetic and air blast frozen pork were examined. The packaged pork samples, which were frozen by air blast freezing at −45℃ or electro-magnetic freezing at −55℃, were thawed using 4 different methods: refrigeration (4±1℃), room temperature (RT, 25℃), cold water (15℃), and microwave (2450 MHz). Analyses were carried out to determine the drip and cooking loss, water holding capacity (WHC), moisture content and sensory evaluation. Frozen pork thawed in a microwave indicated relatively less thawing loss (0.63-1.24%) than the other thawing methods (0.68-1.38%). The cooking loss after electro-magnetic freezing indicated 37.4% by microwave thawing, compared with 32.9% by refrigeration, 36.5% by RT, and 37.2% by cold water in ham. The thawing of samples frozen by electro-magnetic freezing showed no significant differences between the methods used, while the moisture content was higher in belly thawed by microwave (62.0%) after electro-magnetic freezing than refrigeration (54.8%), RT (61.3%), and cold water (61.1%). The highest overall acceptability was shown for microwave thawing after electro-magnetic freezing but there were no significant differences compared to that of the other samples. PMID:26761493

Influence of seminal plasma on fresh and post-thaw parameters of stallion epididymal spermatozoa.

PubMed

Heise, A; Thompson, P N; Gerber, D

2011-02-01

Fresh and post-thaw parameters (motility, morphology and viability) of stallion epididymal spermatozoa that have been and have not been exposed to seminal plasma were evaluated, and directly compared to fresh and post-thaw parameters of ejaculated spermatozoa. Six sperm categories of each stallion (n=4) were evaluated for motility, morphology and viability. These categories were fresh ejaculated spermatozoa (Fr-E), fresh epididymal spermatozoa that had been exposed to seminal plasma (Fr-SP+), fresh epididymal spermatozoa that had never been exposed to seminal plasma (Fr-SP-), frozen-thawed ejaculated spermatozoa (Cr-E), frozen-thawed epididymal spermatozoa that had been exposed to seminal plasma prior to freezing (Cr-SP+) and frozen-thawed epididymal spermatozoa that had never been exposed to seminal plasma (Cr-SP-). Results show that seminal plasma stimulates initial motility of fresh epididymal stallion spermatozoa while this difference in progressive motility is no longer present post-thaw; and that progressive motility of fresh or frozen-thawed ejaculated stallion spermatozoa is not always a good indicator for post-thaw progressive motility of epididymal spermatozoa. This study shows that seminal plasma has a positive influence on the incidence of overall sperm defects, midpiece reflexes and distal cytoplasmic droplets in frozen-thawed stallion epididymal spermatozoa while the occurance of midpiece reflexes is likely to be linked to distal cytoplasmic droplets. Furthermore, seminal plasma does not have an influence on viability of fresh and frozen-thawed morphologically normal epididymal spermatozoa. We recommend the retrograde flushing technique using seminal plasma as flushing medium to harvest and freeze stallion epididymal spermatozoa. Copyright © 2010 Elsevier B.V. All rights reserved.

The Impact of Repeated Freeze-Thaw Cycles on the Quality of Biomolecules in Four Different Tissues.

PubMed

Ji, Xiaoli; Wang, Min; Li, Lingling; Chen, Fang; Zhang, Yanyang; Li, Qian; Zhou, Junmei

2017-10-01

High-quality biosamples are valuable resources for biomedical research. However, some tissues are stored without being sectioned into small aliquots and have to undergo repeated freeze-thaw cycles throughout prolonged experimentation. Little is known regarding the effects of repeated freeze-thaw cycles on the quality of biomolecules in tissues. The aim of this study was to evaluate the impact of repeated freeze-thaw (at room temperature or on ice) cycles on biomolecules and gene expression in four different types of tissues. Each fresh tissue was sectioned into seven aliquots and snap-frozen before undergoing repeated freeze-thaw cycles at room temperature or on ice. Biomolecules were extracted and analyzed. Both relative and absolute quantification were used to detect the changes in gene expression. The results indicated that the impact of repeated freeze-thaw cycles on RNA integrity varied by tissue type. Gene expression, including the housekeeping gene, was affected in RNA-degraded samples according to absolute quantification rather than relative quantification. Furthermore, our results suggest that thawing on ice could protect RNA integrity compared with thawing at room temperature. No obvious degradation of protein or DNA was observed with repeated freeze-thaw cycles either at room temperature or on ice. This research provides ample evidence for the necessity of sectioning fresh tissues into small aliquots before snap-freezing, thus avoiding degradation of RNA and alteration of gene expression resulting from repeated freeze-thaw cycles. For frozen tissue samples that were already in storage and had to be used repeatedly during their lifecycle, thawing on ice or sectioned at ultralow temperature is recommended.

Interactions of Polychlorinated Biphenyls and Organochlorine Pesticides with Sedimentary Organic Matter of Retrogressive Thaw Slump-Affected Lakes in the Tundra Uplands Adjacent to the Mackenzie Delta, NT, Canada

NASA Astrophysics Data System (ADS)

Eickmeyer, D.; Kimpe, L.; Kokelj, S.; Pisaric, M. F.; Smol, J. P.; Sanei, H.; Thienpont, J. R.; Blais, J. M.

2016-12-01

Increased incidences and severity of thermokarst activity, such as retrogressive thaw slumping, in the permafrost-rich western Canadian Arctic have been previously shown to influence basic water chemistry and sedimentation rates of affected lakes. Using a comparative spatial analysis of sediment cores from 8 lakes in tundra uplands adjacent to the Mackenzie Delta, NT, we examined how the presence of retrogressive thaw slumps on lake shores affected persistent organic pollutant (POPs, including polychlorinated biphenyls (PCB), hexa- and pentachlorobenzenes (CBz)and dichlorodiphenyltrichloroethane and metabolites (DDT)) accumulation in lake sediments. Sediments of slump-affected lakes contained higher total organic carbon (TOC)-normalized POP concentrations than nearby reference lakes that were unaffected by thaw slumps. PCB and DDT deposition rates to the sediment were not significantly different between reference and affected lakes; however, CBz flux to sediment was found to be higher in slump-affected lakes. Mean focus-corrected inorganic sedimentation rates were positively related to TOC-normalized contaminant concentrations, explaining 58 - 94% of the variation in POP concentrations in sediment, suggesting that reduced organic carbon in slump-affected lake water results in higher concentrations of POPs on sedimentary organic matter. This explanation was corroborated by an inverse relationship between sedimentary POP concentrations and TOC content of the lake water. Higher POP concentrations observed in sediment of slump-affected lakes are best explained by simple solvent switching processes of hydrophobic organic contaminants onto a smaller pool of available organic carbon when compared to neighboring lakes unaffected by thaw slump development.

Freeze-Thaw Cycles Effects on Soil Compaction in a Clay Loam

NASA Astrophysics Data System (ADS)

Jabro, J.; Evans, R.; Iversen, W.

2012-04-01

Inappropriate soil management practices and heavier farm machinery and equipment have led to an increase in soil compaction in the last two decades prompting increased global concern regarding the impact of soil compaction on crop production and soil quality in modern mechanized agriculture. A 3-yr comprehensive study was established to evaluate the dynamic of freeze-thaw cycles on soil compaction in a clay loam soil. Plots of frozen soils were compared with plots where soils were prevented from freezing with electrically heated blankets commonly used on concrete. Results showed that frequent freeze-thaw cycles over the winter alleviated a majority of soil compaction at the 0 - 20 cm depth. Soil penetration resistance in compacted soils was reduced by 73 and 68% over the winter at the 0 - 10 and 10 - 20 cm depths, respectively, due to dynamic effects of freeze-thaw cycles on soil structure and particles configuration. In unfrozen compacted soils, the penetration resistance was also reduced by 50 and 60% over winter at the 0 - 10 and 10 - 20 cm depths, respectively, due to the biology of soil, microbial activity, and disruptive effects of shrink-swell cycles. These results have demonstrated of how repeated freeze-thaw cycles can alleviate soil compaction, alter soil physical quality and create optimal soil conditions required for profitable growth of agricultural crops. The results from this study will save growers considerable time, money and energy currently required to alleviate soil compaction using other methods such as sub-soiling and deep tillage. We believe that Mother Nature provides ways to reverse soil compaction and improve soil structure and aggregation through the dynamic of freeze-thaw cycles that soils in Montana and other parts of the country go through each year. We concluded that the Mother Nature is the most effective and cheapest way to alleviate soil compaction.

Analytical validation of bovine plasma ceruloplasmin measurement by p-phenylenediamine oxidation and effect of storage time and freezing temperature.

PubMed

Hussein, Hussein Awad; Staufenbiel, Rudolf

2017-10-04

Determination of ceruloplasmin (Cp) activity in plasma can provide an objective measure of the health of dairy cows as well as it can be used for various diagnostic purposes. The current study was designed to perform an analytical validation of a method for the determination of plasma Cp activity in dairy cows and to evaluate the influences of plasma storage times and temperatures as well as freeze-thaw cycles on the activity of this enzyme. This cohort was carried out on ten cows. For each cow, 24 aliquots of plasma, which were stored at different temperature regimes, were prepared. Both intra- and interassay coefficients of variation (CVs) were determined. The linearity was evaluated using bovine plasma Cp standard. The mean values of intra- and interassay CVs were 1.08 and 2.12%, respectively. Results of linearity testing showed a high correlation coefficient (r = 0.998, P < 0.001). After 3 days of storage at room temperature and refrigeration, the plasma activity of Cp was significantly lowered (P < 0.05). Plasma samples kept at freezing for 3 months revealed insignificant changes in the activity of Cp. Repeated freeze-thaw cycles for three times had no significant influence on the activity of Cp. The method is easy and may be valid at values of Cp ranging from 100 to 1000 mg/L. It seems that keeping of plasma samples at room temperature and refrigeration longer than 3 days is unsuitable for Cp measurement. In addition, Cp remains stable in plasma samples stored at freezing as well as repeat freeze-thaw cycles.

SP-100 system thaw and start-up strategies

NASA Astrophysics Data System (ADS)

Kirpich, A.; Choe, H.

The authors review several strategies that have been considered during calendar year 1990 for SP-100 system start-up and thaw, and provide results of screening analyses. Screening studies have identified three concepts which are capable of thawing the SP-100 system: (1) a heat pipe approach in which reactor-heated heat pipes are routed to equipment enclosed within a thaw cavity; (2) a bleed-tube approach in which perforated tubes routed through ducting and components achieve thaw progressively as the result of successively thawing bleed-holes; and (3) a NaK traceline approach in which reactor-heated NaK is routed along ducting and components and achieves lithium thaw by both radiative and conductive coupling methods. Key issues have been identified in connection with pump start-up, reactor and power converter transient behavior, and hydraulic circuit stability. Pump start-up stability is accomplished by a linked-pump hydraulic arrangement.

Freezing and thawing or freezing, thawing, and aging effects on beef tenderness

USDA-ARS?s Scientific Manuscript database

The objective of this study was to determine the effect of freezing and thawing or freezing and thawing with an additional aging period after frozen storage on the tenderness of longissimus lumborum (LL) and semitendinosus (ST) steaks relative to aged, fresh steaks. Left-side LL and ST (n=35 each) ...

Moisture controls decomposition rate in thawing tundra

Treesearch

C.E. Hicks-Pries; E.A.G. Schuur; S.M. Natali; J.G. Vogel

2013-01-01

Permafrost thaw can affect decomposition rates by changing environmental conditions and litter quality. As permafrost thaws, soils warm and thermokarst (ground subsidence) features form, causing some areas to become wetter while other areas become drier. We used a common substrate to measure how permafrost thaw affects decomposition rates in the surface soil in a...

Identification and classification of genes required for tolerance to freeze-thaw stress revealed by genome-wide screening of Saccharomyces cerevisiae deletion strains.

PubMed

Ando, Akira; Nakamura, Toshihide; Murata, Yoshinori; Takagi, Hiroshi; Shima, Jun

2007-03-01

Yeasts used in bread making are exposed to freeze-thaw stress during frozen-dough baking. To clarify the genes required for freeze-thaw tolerance, genome-wide screening was performed using the complete deletion strain collection of diploid Saccharomyces cerevisiae. The screening identified 58 gene deletions that conferred freeze-thaw sensitivity. These genes were then classified based on their cellular function and on the localization of their products. The results showed that the genes required for freeze-thaw tolerance were frequently involved in vacuole functions and cell wall biogenesis. The highest numbers of gene products were components of vacuolar H(+)-ATPase. Next, the cross-sensitivity of the freeze-thaw-sensitive mutants to oxidative stress and to cell wall stress was studied; both of these are environmental stresses closely related to freeze-thaw stress. The results showed that defects in the functions of vacuolar H(+)-ATPase conferred sensitivity to oxidative stress and to cell wall stress. In contrast, defects in gene products involved in cell wall assembly conferred sensitivity to cell wall stress but not to oxidative stress. Our results suggest the presence of at least two different mechanisms of freeze-thaw injury: oxidative stress generated during the freeze-thaw process, and defects in cell wall assembly.

Artificial insemination with frozen-thawed boar sperm.

PubMed

Yeste, Marc; Rodríguez-Gil, Joan E; Bonet, Sergi

2017-09-01

Artificial insemination with frozen-thawed semen in pigs is not a routine technique; its use is restricted to specific cases, such as preservation of valuable genetic material (germplasm banks), safety strategies in case of natural disasters, long-distance transport of sperm, and in combination with sex-sorting. Cryoinjuries resulting from freeze-thawing protocols are a major concern with regard to the fertilization capacity of the treated sperm, which is lower than that of liquid-stored semen. Here, we provide an overview of artificial insemination using cryopreserved sperm, and summarize the factors that influence cryopreservation success before, during, and after freeze-thaw (i.e., sperm selection before starting the cryopreservation process, holding time, use of cryoprotectants, and rates of freezing and thawing) and that are driving the identification of biomarkers to predict sensitivity to cryodamage. Three different artificial insemination techniques (conventional or intracervical; intrauterine; and deep intrauterine) are also discussed with regards to their relevance when using frozen-thawed semen. Finally, we review the use of additives to freezing and thawing media, given reports that they may maintain and improve the quality and fertilizing capacity of frozen-thawed sperm. In sum, artificial insemination with frozen-thawed boar sperm can provide reasonable fertility outcomes, if freezable ejaculates, specific additives, and appropriate insemination techniques are used. © 2017 Wiley Periodicals, Inc.

Creep characteristics and process analyses of a thaw slump in the permafrost region of the Qinghai-Tibet Plateau, China

NASA Astrophysics Data System (ADS)

Sun, Zhe; Wang, Yibo; Sun, Yan; Niu, Fujun; Li, Guoyu; Gao, Zeyong

2017-09-01

A thaw slump in the permafrost region of the Qinghai-Tibet Plateau was monitored to investigate typical characteristics of creep positions and processes in combination with soil property analyses. The results show that the thaw settlement exhibits a contraction effect in the horizontal direction because of uneven thaw settlement. Slope displacement of creep occurs only in the top 50 cm of the soil. The gravimetric water content, soil porosity, and soil temperature are higher near the thaw slump in thaw seasons compared with the undisturbed soil; however, the shear strength is lower. Melting ground ice releases thaw water that converges along the slope and forms an overland flow at the front part of the gentle slope area and a ponding depression at the slope bottom. The analyses of slope stability using the infinite slope model shows that the headwall of the slope is inevitably unstable and slides under saturated conditions, whereas the gentle slope area and slope bottom with slight creep displacement are relatively stable. The small retrogressive thaw slump is in an early development stage. With increasing degree of thaw settlement and rate of erosion, the headwall will become steeper and a thermokarst lake will form at the slope bottom.

Effect of sucrose and pectin addition on physical, chemical, thermal and rheological properties of frozen/thawed pineapple pulps

NASA Astrophysics Data System (ADS)

Conceição, Márcia Cavalcante; Fernandes, Tatiana Nunes; Prado, Mônica Elisabeth Torres; de Resende, Jaime Vilela

2012-09-01

Pectin (0-1.0 g/100 mL) and sucrose (0-20 g/100 mL) were added to pineapple pulp to improve their rheological properties, thermal properties and stability after freezing and thawing processes. The properties of the mixes were characterized before and after freezing and thawing. Samples were frozen at -20°C, and the freeze concentration was evaluated every 60 min. The thawing rate was evaluated at 19°C and quantified by photographic editing and image analysis software. The thawing rates and values for the freeze concentration were leveled out at pectin concentrations above 0.5 g/100 mL pectin, which indicated that pectin functions to maintain structural homogeneity during freezing. In the thawed samples, the plastic viscosity values were leveled out from pectin concentrations (0.25-0.75 g/100 mL) as the sucrose concentration increased when compared to unfrozen samples. The differences between the rheological parameters of the unfrozen and frozen/thawed pulps, the higher yield stress values after thawing were attributed to the size of suspended particles in the pulp. Applications can specify formulations of frozen products containing pectin, where these properties can be handled after thawing the product.