active region core: Topics by Science.gov

Sample records for active region core

Evolution of microglial activation in ischaemic core and peri-infarct regions after stroke: a PET study with the TSPO molecular imaging biomarker [((11))C]vinpocetine.

PubMed

Gulyás, Balázs; Tóth, Miklós; Schain, Martin; Airaksinen, Anu; Vas, Adám; Kostulas, Konstantinos; Lindström, Per; Hillert, Jan; Halldin, Christer

2012-09-15

Although there is increasing evidence for microglial activation after an ischaemic stroke in the infarct core and the peri-infarct region, the "evolution" of the process in stroke patients is poorly known. Using PET and [((11))C]vinpocetine, we measured the regional changes of TSPO in the brain of nine ischaemic stroke patients up to 14weeks after the insult. Already a week after stroke there was an increased radioligand uptake, indicating the up-regulation of TSPO and the presence of activated microglia, in both the ischaemic core and the peri-infarct zone. This increased activation showed a steady decrease with post stroke time. The proportion between %SUV values in the peri-infarct zone and the ischaemic core increased with time. There were no time-dependent TSPO activity changes in other regions, not affected directly by the stroke. The present observations demonstrate that increased regional microglia activation, as a consequence of stroke, can be visualised with PET, using the TSPO molecular imaging biomarker [((11))C]vinpocetine. The evolution of this microglial activation shows a time dependent decrease the gradient of which is different between the peri-infarct zone and the ischaemic core. The findings indicate an increased microglial activation in the peri-stroke region for several weeks after the insult. Copyright © 2012 Elsevier B.V. All rights reserved.
THE COLD SHOULDER: EMISSION MEASURE DISTRIBUTIONS OF ACTIVE REGION CORES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schmelz, J. T.; Pathak, S., E-mail: jschmelz@memphis.edu

2012-09-10

The coronal heating mechanism for active region core loops is difficult to determine because these loops are often not resolved and cannot be studied individually. Rather, we concentrate on the 'inter-moss' areas between loop footpoints. We use observations from the Hinode EUV Imaging Spectrometer and the X-Ray Telescope to calculate the emission measure distributions of eight inter-moss areas in five different active regions. The combined data sets provide both high- and low-temperature constraints and ensure complete coverage in the temperature range appropriate for active regions. For AR 11113, the emission can be modeled with heating events that occur on timescalesmore » less than the cooling time. The loops in the core regions appear to be close to equilibrium and are consistent with steady heating. The other regions studied, however, appear to be dominated by nanoflare heating. Our results are consistent with the idea that active region age is an important parameter in determining whether steady or nanoflare heating is primarily responsible for the core emission, that is, older regions are more likely to be dominated by steady heating, while younger regions show more evidence of nanoflares.« less
On Heating the Sun's Corona by Magnetic Explosions: Feasibility in Active Regions and prospects for Quiet Regions and Coronal Holes

NASA Technical Reports Server (NTRS)

Moore, Ronald L.; Falconer, D. A.; Porter, Jason G.; Suess, Steven T.

1999-01-01

We build a case for the persistent strong coronal heating in active regions and the pervasive quasi-steady heating of the corona in quiet regions and coronal holes being driven in basically the same way as the intense transient heating in solar flares: by explosions of sheared magnetic fields in the cores of initially closed bipoles. We begin by summarizing the observational case for exploding sheared core fields being the drivers of a wide variety of flare events, with and without coronal mass ejections. We conclude that the arrangement of an event's flare heating, whether there is a coronal mass ejection, and the time and place of the ejection relative to the flare heating are all largely determined by four elements of the form and action of the magnetic field: (1) the arrangement of the impacted, interacting bipoles participating in the event, (2) which of these bipoles are active (have sheared core fields that explode) and which are passive (are heated by injection from impacted active bipoles), (3) which core field explodes first, and (4) which core-field explosions are confined within the closed field of their bipoles and which ejectively open their bipoles. We then apply this magnetic-configuration framework for flare heating to the strong coronal heating observed by the Yohkoh Soft X-ray Telescope in an active region with strongly sheared core fields observed by the MSFC vector magnetograph. All of the strong coronal heating is in continually microflaring sheared core fields or in extended loops rooted against the active core fields. Thus, the strong heating occurs in field configurations consistent with the heating being driven by frequent core-field explosions that are smaller but similar to those in confined flares and flaring arches. From analysis of the thermal and magnetic energetics of two selected core-field microflares and a bright extended loop, we find that (1) it is energetically feasible for the sheared core fields to drive all of the coronal heating in the active region via a staccato of magnetic microexplosions, (2) the microflares at the feet of the extended loop behave as the flares at the feet of flaring arches in that more coronal heating is driven within the active bipole than in the extended loop, (3) the filling factor of the X-ray plasma in the core field microflares and in the extended loop is approximately 0.1, and (4) to release enough magnetic energy for a typical microflare (10^27 - 10^28 erg), a microflaring strand of sheared core field need expand and/or untwist by only a few percent at most. Finally, we point out that (1) the field configurations for strong coronal heating in our example active region (i.e., neutral-line core fields, many embedded in the feet of extended loops) are present in abundance in the magnetic network in quiet regions and coronal holes, and (2) it is known that many network bipoles do microflare and that many produce detectable coronal heating. We therefore propose that exploding sheared core fields are the drivers of most of the heating and dynamics of the solar atmosphere, ranging from the largest and most powerful coronal mass ejections and flares, to the vigorous microflaring and coronal heating in active regions, to the multitude of fine-scale explosive events in the magnetic network. The low-lysing exploding core fields in the network drive microflares, spicules, global coronal heating, and ,consequently, the solar wind.
The importance of actions and the worth of an object: dissociable neural systems representing core value and economic value.

PubMed

Brosch, Tobias; Coppin, Géraldine; Schwartz, Sophie; Sander, David

2012-06-01

Neuroeconomic research has delineated neural regions involved in the computation of value, referring to a currency for concrete choices and decisions ('economic value'). Research in psychology and sociology, on the other hand, uses the term 'value' to describe motivational constructs that guide choices and behaviors across situations ('core value'). As a first step towards an integration of these literatures, we compared the neural regions computing economic value and core value. Replicating previous work, economic value computations activated a network centered on medial orbitofrontal cortex. Core value computations activated medial prefrontal cortex, a region involved in the processing of self-relevant information and dorsal striatum, involved in action selection. Core value ratings correlated with activity in precuneus and anterior prefrontal cortex, potentially reflecting the degree to which a core value is perceived as internalized part of one's self-concept. Distributed activation pattern in insula and ACC allowed differentiating individual core value types. These patterns may represent evaluation profiles reflecting prototypical fundamental concerns expressed in the core value types. Our findings suggest mechanisms by which core values, as motivationally important long-term goals anchored in the self-schema, may have the behavioral power to drive decisions and behaviors in the absence of immediately rewarding behavioral options.
H(alpha) Proxies for EIT Crinkles: Further Evidence for Preflare "Breakout"-Type Activity in an Ejective Solar Eruption

NASA Technical Reports Server (NTRS)

Sterling, Alphonse C.; Qiu, Jiong; Wang, Haimin; Moore, Ronald L.

2001-01-01

We present H(alpha) observations from Big Bear Solar Observatory of an eruptive flare in NOAA Active Region 8210, occurring near 22:30 UT on 1998 May 1. Previously, using the Extreme Ultraviolet Imaging Telescope (EIT) on the Solar and Heliospheric Observatory (SOHO) spacecraft, we found that a pattern of transient, localized brightenings, which we call 'EIT crinkles,' appears in the neighborhood of the eruption near the time of flare onset. These EIT crinkles occur at a location in the active region well separated from the sheared core magnetic fields, which is where the most intense features of the eruption are concentrated. We also previously found that high-cadence images from the Soft X-ray Telescope (SXT) on Yohkoh indicate that soft X-ray intensity enhancements in the core begin after the start of the EIT crinkles. With the H(alpha) data, we find remote flare brightening counterparts to the EIT crinkles. Light curves as functions of time of various areas of the active region show that several of the remote flare brightenings undergo intensity increases prior to the onset of principal brightenings in the core region, consistent with our earlier findings from EIT and SXT data. These timing relationships are consistent with the eruption onset mechanism known as the breakout model, introduced by Antiochos and colleagues, which proposes that eruptions begin with reconnection at a magnetic null high above the core region. Our observations are also consistent with other proposed mechanisms that do not involve early reconnection in the core region. As a corollary, our observations are not consistent with the so-called tether-cutting models, which say that the eruption begins with reconnection in the core. The H(alpha) data further show that a filament in the core region becomes activated near the time of EIT crinkle onset, but little if any of the filament actually erupts, despite the presence of a halo coronal mass ejection (CME) associated with this event.
Task-Based Core-Periphery Organization of Human Brain Dynamics

PubMed Central

Bassett, Danielle S.; Wymbs, Nicholas F.; Rombach, M. Puck; Porter, Mason A.; Mucha, Peter J.; Grafton, Scott T.

2013-01-01

As a person learns a new skill, distinct synapses, brain regions, and circuits are engaged and change over time. In this paper, we develop methods to examine patterns of correlated activity across a large set of brain regions. Our goal is to identify properties that enable robust learning of a motor skill. We measure brain activity during motor sequencing and characterize network properties based on coherent activity between brain regions. Using recently developed algorithms to detect time-evolving communities, we find that the complex reconfiguration patterns of the brain's putative functional modules that control learning can be described parsimoniously by the combined presence of a relatively stiff temporal core that is composed primarily of sensorimotor and visual regions whose connectivity changes little in time and a flexible temporal periphery that is composed primarily of multimodal association regions whose connectivity changes frequently. The separation between temporal core and periphery changes over the course of training and, importantly, is a good predictor of individual differences in learning success. The core of dynamically stiff regions exhibits dense connectivity, which is consistent with notions of core-periphery organization established previously in social networks. Our results demonstrate that core-periphery organization provides an insightful way to understand how putative functional modules are linked. This, in turn, enables the prediction of fundamental human capacities, including the production of complex goal-directed behavior. PMID:24086116
Imagining the future: The core episodic simulation network dissociates as a function of timecourse and the amount of simulated information

PubMed Central

Thakral, Preston P.; Benoit, Roland G.; Schacter, Daniel L.

2017-01-01

Neuroimaging data indicate that episodic memory (i.e., remembering specific past experiences) and episodic simulation (i.e., imagining specific future experiences) are associated with enhanced activity in a common set of neural regions, often referred to as the core network. This network comprises the hippocampus, parahippocampal cortex, lateral and medial parietal cortex, lateral temporal cortex, and medial prefrontal cortex. Evidence for a core network has been taken as support for the idea that episodic memory and episodic simulation are supported by common processes. Much remains to be learned about how specific core network regions contribute to specific aspects of episodic simulation. Prior neuroimaging studies of episodic memory indicate that certain regions within the core network are differentially sensitive to the amount of information recollected (e.g., the left lateral parietal cortex). In addition, certain core network regions dissociate as a function of their timecourse of engagement during episodic memory (e.g., transient activity in the posterior hippocampus and sustained activity in the left lateral parietal cortex). In the current study, we assessed whether similar dissociations could be observed during episodic simulation. We found that the left lateral parietal cortex modulates as a function of the amount of simulated details. Of particular interest, while the hippocampus was insensitive to the amount of simulated details, we observed a temporal dissociation within the hippocampus: transient activity occurred in relatively posterior portions of the hippocampus and sustained activity occurred in anterior portions. Because the posterior hippocampal and lateral parietal findings parallel those observed previously during episodic memory, the present results add to the evidence that episodic memory and episodic simulation are supported by common processes. Critically, the present study also provides evidence that regions within the core network support dissociable processes. PMID:28324695
Fire, Climate, and Human Activity: A Combustive Combination

NASA Astrophysics Data System (ADS)

Kehrwald, N. M.; Battistel, D.; Argiriadis, E.; Barbante, C.; Barber, L. B.; Fortner, S. K.; Jasmann, J.; Kirchgeorg, T.; Zennaro, P.

2017-12-01

Ice and lake core records demonstrate that fires caused by human activity can dominate regional biomass burning records in the Common Era. These major increases in fires are often associated with extensive land use change such as an expansion in agriculture. Regions with few humans, relatively stable human populations and/or unvarying land use often have fire histories that are dominated by climate parameters such as temperature and precipitation. Here, we examine biomass burning recorded in ice cores from northern Greenland (NEEM, (77°27'N; 51°3.6'W), Alaska (Juneau Icefield, 58° 35' N; 134° 29'W) and East Antarctica (EPICA DOME C; 75°06'S; 123°21'E), along with New Zealand lake cores to investigate interactions between climate, fire and human activity. Biomarkers such as levoglucosan, and its isomers mannosan and galactosan, can only be produced by cellulose combustion and therefore are specific indicators of past fire activity archived in ice and lake cores. These fire histories add another factor to climate proxies from the same core, and provide a comparison to regional fire syntheses from charcoal records and climate models. For example, fire data from the JSBACH-Spitfire model for the past 2000 years demonstrates that a climate-only scenario would not increase biomass burning in high northern latitudes for the past 2000 years, while NEEM ice core and regional pollen records demonstrate both increased fire activity and land use change that may be ascribed to human activity. Additional biomarkers such as fecal sterols in lake sediments can determine when people were in an area, and can help establish if an increased human presence in an area corresponds with intensified fire activity. This combination of specific biomarkers, other proxy data, and model output can help determine the relative impact of humans versus climate factors on regional fire activity.
Specifying the core network supporting episodic simulation and episodic memory by activation likelihood estimation

PubMed Central

Benoit, Roland G.; Schacter, Daniel L.

2015-01-01

It has been suggested that the simulation of hypothetical episodes and the recollection of past episodes are supported by fundamentally the same set of brain regions. The present article specifies this core network via Activation Likelihood Estimation (ALE). Specifically, a first meta-analysis revealed joint engagement of core network regions during episodic memory and episodic simulation. These include parts of the medial surface, the hippocampus and parahippocampal cortex within the medial temporal lobes, and the lateral temporal and inferior posterior parietal cortices on the lateral surface. Both capacities also jointly recruited additional regions such as parts of the bilateral dorsolateral prefrontal cortex. All of these core regions overlapped with the default network. Moreover, it has further been suggested that episodic simulation may require a stronger engagement of some of the core network’s nodes as wells as the recruitment of additional brain regions supporting control functions. A second ALE meta-analysis indeed identified such regions that were consistently more strongly engaged during episodic simulation than episodic memory. These comprised the core-network clusters located in the left dorsolateral prefrontal cortex and posterior inferior parietal lobe and other structures distributed broadly across the default and fronto-parietal control networks. Together, the analyses determine the set of brain regions that allow us to experience past and hypothetical episodes, thus providing an important foundation for studying the regions’ specialized contributions and interactions. PMID:26142352
H-alpha Proxies for EIT Crinkles: Further Evidence for Pre-Flare "Breakout"-Type Activity in an Ejective Solar Eruption

NASA Technical Reports Server (NTRS)

Sterling, Alphonse C.; Moore, R. L.; Qiu, J.; Wang, H.; Whitaker, Ann F. (Technical Monitor)

2001-01-01

We present Halpha observations from Big Bear Solar Observatory of an eruptive flare in NOAA AR 8210, occurring near 22:30 UT on 1998 May 1. Previously, using the EUV Imaging Telescope (EIT) on the SOHO spacecraft, we found that a pattern of transient, localized brightenings, which we call "EIT crinkles," appears in the neighborhood of the eruption near the time of flare onset. These EIT crinkles occur at a location in the active region well separated from the sheared core magnetic fields, which is where the most intense features of the eruption are concentrated. We also previously found that high-cadence images from the Soft X-ray Telescope (SXT) on Yohkoh indicate that soft X-ray intensity enhancements in the core begin after the start of the EIT crinkles. With the Halpha data, we find remote flare brightening counterparts to the EIT crinkles. Lightcurves as functions of time of various areas of the active region show that several of the remote flare brightenings undergo intensity increases prior to onset of principle brightenings in the core region, consistent with our earlier findings from EIT and SXT data. These timing relationships are consistent with the eruption onset mechanism known as the breakout model, introduced by Antiochos and colleagues, which proposes that eruptions begin with reconnection at a magnetic null high above the core region. Our observations are also consistent with other proposed mechanisms which do not involve early reconnection in the core region. As a corollary, our observations are not consistent with the so-called tether cutting models, which say that the eruption begins with reconnection in the core. The Halpha data further show that a filament in the core region becomes activated near the time of EIT crinkle onset, but little if any of the filament actually erupts, despite the presence of a halo Coronal Mass Ejection (CME) associated with this event.
Specifying the core network supporting episodic simulation and episodic memory by activation likelihood estimation.

PubMed

Benoit, Roland G; Schacter, Daniel L

2015-08-01

It has been suggested that the simulation of hypothetical episodes and the recollection of past episodes are supported by fundamentally the same set of brain regions. The present article specifies this core network via Activation Likelihood Estimation (ALE). Specifically, a first meta-analysis revealed joint engagement of expected core-network regions during episodic memory and episodic simulation. These include parts of the medial surface, the hippocampus and parahippocampal cortex within the medial temporal lobes, and the temporal and inferior posterior parietal cortices on the lateral surface. Both capacities also jointly recruited additional regions such as parts of the bilateral dorsolateral prefrontal cortex. All of these core regions overlapped with the default network. Moreover, it has further been suggested that episodic simulation may require a stronger engagement of some of the core network's nodes as well as the recruitment of additional brain regions supporting control functions. A second ALE meta-analysis indeed identified such regions that were consistently more strongly engaged during episodic simulation than episodic memory. These comprised the core-network clusters located in the left dorsolateral prefrontal cortex and posterior inferior parietal lobe and other structures distributed broadly across the default and fronto-parietal control networks. Together, the analyses determine the set of brain regions that allow us to experience past and hypothetical episodes, thus providing an important foundation for studying the regions' specialized contributions and interactions. Copyright © 2015 Elsevier Ltd. All rights reserved.
COMPOSITE NEUTRONIC REACTOR

DOEpatents

Menke, J.R.

1963-06-11

This patent relates to a reactor having a core which comprises an inner active region and an outer active region, each region separately having a k effective less than one and a k infinity greater than one. The inner and outer regions in combination have a k effective at least equal to one and each region contributes substantially to the k effective of the reactor core. The inner region has a low moderator to fuel ratio such that the majority of fissions occurring therein are induced by neutrons having energies greater than thermal. The outer region has a high moderator to fuel ratio such that the majority of fissions occurring therein are induced by thermal neutrons. (AEC)
Structure-Function Analysis of the Drosophila melanogaster Caudal Transcription Factor Provides Insights into Core Promoter-preferential Activation.

PubMed

Shir-Shapira, Hila; Sharabany, Julia; Filderman, Matan; Ideses, Diana; Ovadia-Shochat, Avital; Mannervik, Mattias; Juven-Gershon, Tamar

2015-07-10

Regulation of RNA polymerase II transcription is critical for the proper development, differentiation, and growth of an organism. The RNA polymerase II core promoter is the ultimate target of a multitude of transcription factors that control transcription initiation. Core promoters encompass the RNA start site and consist of functional elements such as the TATA box, initiator, and downstream core promoter element (DPE), which confer specific properties to the core promoter. We have previously discovered that Drosophila Caudal, which is a master regulator of genes involved in development and differentiation, is a DPE-specific transcriptional activator. Here, we show that the mouse Caudal-related homeobox (Cdx) proteins (mCdx1, mCdx2, and mCdx4) are also preferential core promoter transcriptional activators. To elucidate the mechanism that enables Caudal to preferentially activate DPE transcription, we performed structure-function analysis. Using a systematic series of deletion mutants (all containing the intact DNA-binding homeodomain) we discovered that the C-terminal region of Caudal contributes to the preferential activation of the fushi tarazu (ftz) Caudal target gene. Furthermore, the region containing both the homeodomain and the C terminus of Caudal was sufficient to confer core promoter-preferential activation to the heterologous GAL4 DNA-binding domain. Importantly, we discovered that Drosophila CREB-binding protein (dCBP) is a co-activator for Caudal-regulated activation of ftz. Strikingly, dCBP conferred the ability to preferentially activate the DPE-dependent ftz reporter to mini-Caudal proteins that were unable to preferentially activate ftz transcription themselves. Taken together, it is the unique combination of dCBP and Caudal that enables the co-activation of ftz in a core promoter-preferential manner. © 2015 by The American Society for Biochemistry and Molecular Biology, Inc.
Localized Optogenetic Targeting of Rotors in Atrial Cardiomyocyte Monolayers.

PubMed

Feola, Iolanda; Volkers, Linda; Majumder, Rupamanjari; Teplenin, Alexander; Schalij, Martin J; Panfilov, Alexander V; de Vries, Antoine A F; Pijnappels, Daniël A

2017-11-01

Recently, a new ablation strategy for atrial fibrillation has emerged, which involves the identification of rotors (ie, local drivers) followed by the localized targeting of their core region by ablation. However, this concept has been subject to debate because the mode of arrhythmia termination remains poorly understood, as dedicated models and research tools are lacking. We took a unique optogenetic approach to induce and locally target a rotor in atrial monolayers. Neonatal rat atrial cardiomyocyte monolayers expressing a depolarizing light-gated ion channel (Ca 2+ -translocating channelrhodopsin) were subjected to patterned illumination to induce single, stable, and centralized rotors by optical S1-S2 cross-field stimulation. Next, the core region of these rotors was specifically and precisely targeted by light to induce local conduction blocks of circular or linear shapes. Conduction blocks crossing the core region, but not reaching any unexcitable boundary, did not lead to termination. Instead, electric waves started to propagate along the circumference of block, thereby maintaining reentrant activity, although of lower frequency. If, however, core-spanning lines of block reached at least 1 unexcitable boundary, reentrant activity was consistently terminated by wave collision. Lines of block away from the core region resulted merely in rotor destabilization (ie, drifting). Localized optogenetic targeting of rotors in atrial monolayers could lead to both stabilization and destabilization of reentrant activity. For termination, however, a line of block is required reaching from the core region to at least 1 unexcitable boundary. These findings may improve our understanding of the mechanisms involved in rotor-guided ablation. © 2017 American Heart Association, Inc.
FLOWS AND MOTIONS IN MOSS IN THE CORE OF A FLARING ACTIVE REGION: EVIDENCE FOR STEADY HEATING

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brooks, David H.; Warren, Harry P., E-mail: dhbrooks@ssd5.nrl.navy.mi

2009-09-20

We present new measurements of the time variability of intensity, Doppler, and nonthermal velocities in moss in an active region core observed by the EUV Imaging Spectrometer on Hinode in 2007 June. The measurements are derived from spectral profiles of the Fe XII 195 A line. Using the 2'' slit, we repeatedly scanned 150'' by 150'' in a few minutes. This is the first time it has been possible to make such velocity measurements in the moss, and the data presented are the highest cadence spatially resolved maps of moss Doppler and nonthermal velocities ever obtained in the corona. Themore » observed region produced numerous C- and M-class flares with several occurring in the core close to the moss. The magnetic field was therefore clearly changing in the active region core, so we ought to be able to detect dynamic signatures in the moss if they exist. Our measurements of moss intensities agree with previous studies in that a less than 15% variability is seen over a period of 16 hr. Our new measurements of Doppler and nonthermal velocities reveal no strong flows or motions in the moss, nor any significant variability in these quantities. The results confirm that moss at the bases of high temperature coronal loops is heated quasi-steadily. They also show that quasi-steady heating can contribute significantly even in the core of a flare productive active region. Such heating may be impulsive at high frequency, but if so it does not give rise to large flows or motions.« less
DOE Office of Scientific and Technical Information (OSTI.GOV)

Kwon, Deug-Nam; Park, Mi-Ryung; Park, Jong-Yi

Highlights: {yields} The sequences of -604 to -84 bp of the pUPII promoter contained the region of a putative negative cis-regulatory element. {yields} The core promoter was located in the 5F-1. {yields} Transcription factor HNF4 can directly bind in the pUPII core promoter region, which plays a critical role in controlling promoter activity. {yields} These features of the pUPII promoter are fundamental to development of a target-specific vector. -- Abstract: Uroplakin II (UPII) is a one of the integral membrane proteins synthesized as a major differentiation product of mammalian urothelium. UPII gene expression is bladder specific and differentiation dependent, butmore » little is known about its transcription response elements and molecular mechanism. To identify the cis-regulatory elements in the pig UPII (pUPII) gene promoter region, we constructed pUPII 5' upstream region deletion mutants and demonstrated that each of the deletion mutants participates in controlling the expression of the pUPII gene in human bladder carcinoma RT4 cells. We also identified a new core promoter region and putative negative cis-regulatory element within a minimal promoter region. In addition, we showed that hepatocyte nuclear factor 4 (HNF4) can directly bind in the pUPII core promoter (5F-1) region, which plays a critical role in controlling promoter activity. Transient cotransfection experiments showed that HNF4 positively regulates pUPII gene promoter activity. Thus, the binding element and its binding protein, HNF4 transcription factor, may be involved in the mechanism that specifically regulates pUPII gene transcription.« less
The Limit of Magnetic-Shear Energy in Solar Active Regions

NASA Technical Reports Server (NTRS)

Moore, Ronald; Falconer, David; Sterling, Alphonse

2012-01-01

It has been found previously, by measuring from active-region magnetograms a proxy of the free energy in the active region's magnetic field, (1) that there is a sharp upper limit to the free energy the field can hold that increases with the amount of magnetic field in the active region, the active region's magnetic flux content, and (2) that most active regions are near this limit when their field explodes in a coronal mass ejection/flare eruption. That is, explosive active regions are concentrated in a main-sequence path bordering the free-energy-limit line in (flux content, free-energy proxy) phase space. Here, we present evidence that specifies the underlying magnetic condition that gives rise to the free-energy limit and the accompanying main sequence of explosive active regions. Using a suitable free-energy proxy measured from vector magnetograms of 44 active regions, we find evidence that (1) in active regions at and near their free-energy limit, the ratio of magnetic-shear free energy to the non-free magnetic energy the potential field would have is of the order of one in the core field, the field rooted along the neutral line, and (2) this ratio is progressively less in active regions progressively farther below their free-energy limit. Evidently, most active regions in which this core-field energy ratio is much less than one cannot be triggered to explode; as this ratio approaches one, most active regions become capable of exploding; and when this ratio is one, most active regions are compelled to explode.
The Limit of Magnetic-Shear Energy in Solar Active Regions

NASA Technical Reports Server (NTRS)

Moore, Ronald L.; Falconer, David A.; Sterling, Alphonse C.

2013-01-01

It has been found previously, by measuring from active ]region magnetograms a proxy of the free energy in the active region fs magnetic field, (1) that there is a sharp upper limit to the free energy the field can hold that increases with the amount of magnetic field in the active region, the active region fs magnetic flux content, and (2) that most active regions are near this limit when their field explodes in a CME/flare eruption. That is, explosive active regions are concentrated in a main ]sequence path bordering the free ]energy ]limit line in (flux content, free ]energy proxy) phase space. Here we present evidence that specifies the underlying magnetic condition that gives rise to the free ]energy limit and the accompanying main sequence of explosive active regions. Using a suitable free energy proxy measured from vector magnetograms of 44 active regions, we find evidence that (1) in active regions at and near their free ]energy limit, the ratio of magnetic ]shear free energy to the non ]free magnetic energy the potential field would have is of order 1 in the core field, the field rooted along the neutral line, and (2) this ratio is progressively less in active regions progressively farther below their free ]energy limit. Evidently, most active regions in which this core ]field energy ratio is much less than 1 cannot be triggered to explode; as this ratio approaches 1, most active regions become capable of exploding; and when this ratio is 1, most active regions are compelled to explode.
Extended core for motor/generator

DOEpatents

Shoykhet, Boris A.

2005-05-10

An extended stator core in a motor/generator can be utilized to mitigate losses in end regions of the core and a frame of the motor/generator. To mitigate the losses, the stator core can be extended to a length substantially equivalent to or greater than a length of a magnetically active portion in the rotor. Alternatively, a conventional length stator core can be utilized with a shortened magnetically active portion to mitigate losses in the motor/generator. To mitigate the losses in the core caused by stator winding, the core can be extended to a length substantially equivalent or greater than a length of stator winding.
Extended core for motor/generator

DOEpatents

Shoykhet, Boris A.

2006-08-22

An extended stator core in a motor/generator can be utilized to mitigate losses in end regions of the core and a frame of the motor/generator. To mitigate the losses, the stator core can be extended to a length substantially equivalent to or greater than a length of a magnetically active portion in the rotor. Alternatively, a conventional length stator core can be utilized with a shortened magnetically active portion to mitigate losses in the motor/generator. To mitigate the losses in the core caused by stator winding, the core can be extended to a length substantially equivalent or greater than a length of stator winding.

Core-6 fucose and the oligomerization of the 1918 pandemic influenza viral neuraminidase

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wu, Zhengliang L., E-mail: Leon.wu@bio-techne.com; Zhou, Hui; Ethen, Cheryl M.

The 1918 H1N1 influenza virus was responsible for one of the most deadly pandemics in human history. Yet to date, the structure component responsible for its virulence is still a mystery. In order to search for such a component, the neuraminidase (NA) antigen of the virus was expressed, which led to the discovery of an active form (tetramer) and an inactive form (dimer and monomer) of the protein due to different glycosylation. In this report, the N-glycans from both forms were released and characterized by mass spectrometry. It was found that the glycans from the active form had 26% core-6more » fucosylated, while the glycans from the inactive form had 82% core-6 fucosylated. Even more surprisingly, the stalk region of the active form was almost completely devoid of core-6-linked fucose. These findings were further supported by the results obtained from in vitro incorporation of azido fucose and {sup 3}H-labeled fucose using core-6 fucosyltransferase, FUT8. In addition, the incorporation of fucose did not change the enzymatic activity of the active form, implying that core-6 fucose is not directly involved in the enzymatic activity. It is postulated that core-6 fucose prohibits the oligomerization and subsequent activation of the enzyme. - Graphical abstract: Proposed mechanism for how core-fucose prohibits the tetramerization of the 1918 pandemic viral neuraminidase. Only the cross section of the stalk region with two N-linked glycans are depicted for clarity. (A) Carbohydrate–carbohydrate interaction on non-fucosylated monomer allows tetramerization. (B) Core-fucosylation disrupts the interaction and prevents the tetramerization. - Highlights: • Expressed 1918 pandemic influenza viral neuraminidase has inactive and active forms. • The inactive form contains high level of core-6 fucose, while the active form lacks such modification. • Core fucose could interfere the oligomerization of the neuraminidase and thus its activation. • This discovery may explain why 1918 pandemic influenza caused higher death rate among young population.« less
Functional grouping and cortical–subcortical interactions in emotion: A meta-analysis of neuroimaging studies

PubMed Central

Kober, Hedy; Barrett, Lisa Feldman; Joseph, Josh; Bliss-Moreau, Eliza; Lindquist, Kristen; Wager, Tor D.

2009-01-01

We performed an updated quantitative meta-analysis of 162 neuroimaging studies of emotion using a novel multi-level kernel-based approach, focusing on locating brain regions consistently activated in emotional tasks and their functional organization into distributed functional groups, independent of semantically defined emotion category labels (e.g., “anger,” “fear”). Such brain-based analyses are critical if our ways of labeling emotions are to be evaluated and revised based on consistency with brain data. Consistent activations were limited to specific cortical sub-regions, including multiple functional areas within medial, orbital, and inferior lateral frontal cortices. Consistent with a wealth of animal literature, multiple subcortical activations were identified, including amygdala, ventral striatum, thalamus, hypothalamus, and periaqueductal gray. We used multivariate parcellation and clustering techniques to identify groups of co-activated brain regions across studies. These analyses identified six distributed functional groups, including medial and lateral frontal groups, two posterior cortical groups, and paralimbic and core limbic/brainstem groups. These functional groups provide information on potential organization of brain regions into large-scale networks. Specific follow-up analyses focused on amygdala, periaqueductal gray (PAG), and hypothalamic (Hy) activations, and identified frontal cortical areas co-activated with these core limbic structures. While multiple areas of frontal cortex co-activated with amygdala sub-regions, a specific region of dorsomedial prefrontal cortex (dmPFC, Brodmann’s Area 9/32) was the only area co-activated with both PAG and Hy. Subsequent mediation analyses were consistent with a pathway from dmPFC through PAG to Hy. These results suggest that medial frontal areas are more closely associated with core limbic activation than their lateral counterparts, and that dmPFC may play a particularly important role in the cognitive generation of emotional states. PMID:18579414
Conformational changes accompany activation of reovirus RNA-dependent RNA transcription

PubMed Central

Mendez, Israel I.; Weiner, Scott G.; She, Yi-Min; Yeager, Mark; Coombs, Kevin M.

2009-01-01

Many critical biologic processes involve dynamic interactions between proteins and nucleic acids. Such dynamic processes are often difficult to delineate by conventional static methods. For example, while a variety of nucleic acid polymerase structures have been determined at atomic resolution, the details of how some multi-protein transcriptase complexes actively produce mRNA, as well as conformational changes associated with activation of such complexes, remain poorly understood. The mammalian reovirus innermost capsid (core) manifests all enzymatic activities necessary to produce mRNA from each of the 10 encased double-stranded RNA genes. We used rapid freezing and electron cryo-microscopy to trap and visualize transcriptionally active reovirus core particles and compared them to inactive core images. Rod-like density centered within actively transcribing core spike channels was attributed to exiting nascent mRNA. Comparative radial density plots of active and inactive core particles identified several structural changes in both internal and external regions of the icosahedral core capsid. Inactive and transcriptionally active cores were partially digested with trypsin and identities of initial tryptic peptides determined by mass spectrometry. Differentially-digested peptides, which also suggest transcription-associated conformational changes, were placed within the known 3-dimensional structures of major core proteins. PMID:18321727
Human and climate impacts on Holocene fire activity recorded in polar and mountain ice cores

NASA Astrophysics Data System (ADS)

Kehrwald, Natalie; Zennaro, Piero; Kirchgeorg, Torben; Li, Quanlian; Wang, Ninglian; Power, Mitchell; Zangrando, Roberta; Gabrielli, Paolo; Thompson, Lonnie; Gambaro, Andrea; Barbante, Carlo

2014-05-01

Fire is one of the major influences of biogeochemical change on local to hemispheric scales through emitting greenhouse gases, altering atmospheric chemistry, and changing primary productivity. Levoglucosan (1,6-anhydro-β-D-glucopyranose) is a specific molecular that can only be produced by cellulose burning at temperatures > 300°C, comprises a major component of smoke plumes, and can be transported across > 1000 km distances. Levoglucosan is deposited on and archived in glaciers over glacial interglacial cycles resulting in pyrochemical evidence for exploring interactions between fire, climate and human activity. Ice core records provide records of past biomass burning from regions of the world with limited paleofire data including polar and low-latitude, high-altitude regions. Here, we present Holocene fire activity records from the NEEM, Greenland (77° 27'N; 51° 3'W; 2454 masl), EPICA Dome C, Antarctica (75° 06'S; 123° 21'E; 3233 masl), Kilimanjaro, Tanzania (3° 05'S, 21.2° E, 5893 masl) and the Muztagh, China (87.17° E; 36.35° N; 5780 masl ice cores. The NEEM ice core reflects boreal fire activity from both North American and Eurasian sources. Temperature is the dominant control of NEEM levoglucosan flux over decadal to millennial time scales, while droughts influence fire activity over sub-decadal timescales. Our results demonstrate the prominence of Siberian fire sources during intense multiannual droughts. Unlike the NEEM core, which incorporates the largest land masses in the world as potential fire sources, EPICA Dome C is located far from any possible fire source. However, EPICA Dome C levoglucosan concentrations are consistently above detection limits and demonstrate a substantial 1000-fold increase in fire activity beginning approximately 800 years ago. This significant and sustained increase coincides with Maori arrival and dispersal in New Zealand augmented by later European arrival in Australia. The EPICA Dome C levoglucosan profile is similar to regional charcoal compilations from New Zealand and southeastern Australia. Evidence from Kilimanjaro demonstrates a major increase in fire activity centered around 800-1000 years ago, corresponding to both increased temperatures and aridity as recorded in regional lake cores. This peak in fire activity is an order of magnitude higher than at any other time in the record including the most recent period. Environmental and anthropological studies suggest that upslope human migrations have occurred in response to the warmer, drier conditions. Kilimanjaro is surrounded by flammable savanna vegetation, yet the Muztagh core is located in an especially arid section of the Tibetan Plateau and consistently contains levoglucosan concentrations that are 100 to 1000 times greater than the mean Kilimanjaro flux. These high concentrations and the lack of available fuel suggest that regional rather than local biomass burning may be the source of the fire products. Biomass burning aerosols are a major component of the South Asian Brown Cloud and may influence the composition and concentration of pyrogenic aerosols across the Tibetan Plateau. The relative impact of human activity versus climate change on Holocene biomass burning varies regionally. Combining ice and sediment core data with model output can help place these regional differences into a global context with implications for a warming climate.
Hepatitis C virus core protein potentiates proangiogenic activity of hepatocellular carcinoma cells.

PubMed

Shao, Yu-Yun; Hsieh, Min-Shu; Wang, Han-Yu; Li, Yong-Shi; Lin, Hang; Hsu, Hung-Wei; Huang, Chung-Yi; Hsu, Chih-Hung; Cheng, Ann-Lii

2017-10-17

Increased angiogenic activity has been demonstrated in hepatitis C virus (HCV)-related hepatocellular carcinoma (HCC), but the mechanism was unclear. To study the role of HCV core protein, we used tube formation and Matrigel plug assays to assess the proangiogenic activity of an HCC cell line, HuH7, and 2 of its stable clones-HuH7-core-high and HuH7-core-low, with high and low HCV core protein expression, respectively. In both assays, HuH7-core-high and HuH7-core-low cells dose-dependently induced stronger angiogenesis than control cells. HuH7 cells with HCV core protein expression showed increased mRNA and protein expression of vascular endothelial growth factor (VEGF). VEGF inhibition by bevacizumab reduced the proangiogenic activity of HuH7-core-high cells. The promotor region of VEGF contains the binding site of activator protein-1 (AP-1). Compared with controls, HuH7-core-high cells had an increased AP-1 activity and nuclear localization of phospho-c-jun. AP-1 inhibition using either RNA knockdown or AP-1 inhibitors reduced the VEGF mRNA expression and the proangiogenic activity of HuH7-core-high cells. Among 131 tissue samples from HCC patients, HCV-related HCC revealed stronger VEGF expression than did hepatitis B virus-related HCC. In conclusion, increased VEGF expression through AP-1 activation is a crucial mechanism underlying the proangiogenic activity of the HCV core protein in HCC cells.
Hepatitis C virus core protein potentiates proangiogenic activity of hepatocellular carcinoma cells

PubMed Central

Shao, Yu-Yun; Hsieh, Min-Shu; Wang, Han-Yu; Li, Yong-Shi; Lin, Hang; Hsu, Hung-Wei; Huang, Chung-Yi; Hsu, Chih-Hung; Cheng, Ann-Lii

2017-01-01

Increased angiogenic activity has been demonstrated in hepatitis C virus (HCV)-related hepatocellular carcinoma (HCC), but the mechanism was unclear. To study the role of HCV core protein, we used tube formation and Matrigel plug assays to assess the proangiogenic activity of an HCC cell line, HuH7, and 2 of its stable clones—HuH7-core-high and HuH7-core-low, with high and low HCV core protein expression, respectively. In both assays, HuH7-core-high and HuH7-core-low cells dose-dependently induced stronger angiogenesis than control cells. HuH7 cells with HCV core protein expression showed increased mRNA and protein expression of vascular endothelial growth factor (VEGF). VEGF inhibition by bevacizumab reduced the proangiogenic activity of HuH7-core-high cells. The promotor region of VEGF contains the binding site of activator protein-1 (AP-1). Compared with controls, HuH7-core-high cells had an increased AP-1 activity and nuclear localization of phospho-c-jun. AP-1 inhibition using either RNA knockdown or AP-1 inhibitors reduced the VEGF mRNA expression and the proangiogenic activity of HuH7-core-high cells. Among 131 tissue samples from HCC patients, HCV-related HCC revealed stronger VEGF expression than did hepatitis B virus-related HCC. In conclusion, increased VEGF expression through AP-1 activation is a crucial mechanism underlying the proangiogenic activity of the HCV core protein in HCC cells. PMID:29156827
Coronal Heating by Magnetic Explosions

NASA Technical Reports Server (NTRS)

Moore, Ronald L.; Falconer, D. A.; Porter, Jason G.; Suess, Steven T.

1998-01-01

We build a case for the persistent strong coronal heating in active regions and the pervasive quasi-steady heating of the corona in quiet regions and coronal holes being driven in basically the same way as the intense transient heating in solar flares: by explosions of sheared magnetic fields in the cores of initially closed bipoles. We begin by summarizing the observational case for exploding sheared core fields being the drivers of a wide variety of flare events, with and without coronal mass ejections. We conclude that the arrangement of an event's flare heating, whether there is a coronal mass ejection, and the time and place of the ejection relative to the flare heating are all largely determined by four elements of the form and action the magnetic field: (1) the arrangement of the impacted, interacting bipoles participating in the event, (2) which of these bipoles are active (have sheared core fields that explode) and which are passive (are heated by injection from impacted active bipoles), (3) which core field explodes first, and (4) which core-field explosions are confined within the closed field of their bipoles and which ejectively open their bipoles.
Magnetic Roots and the Driving of Extended Coronal Heating

NASA Technical Reports Server (NTRS)

Porter, Jason G.; Falconer, D. A.; Moore, Ronald L.; Harvey, Karen L.; Rabin, Douglas M.; Shimizu, T.

1998-01-01

We report results from a continuation of a previous study, in which we found large bright coronal loops within active regions and extending from active regions that have one end rooted near an island of included magnetic polarity that is a site of enhanced coronal heating and microflares. This suggested that magnetic activity such as microflaring results in enhanced heating in both the compact core field around the island and in the large loops extending from it. We might expect that the intensity variations due to enhanced heating in the compact and extended structures would be correlated. However, although some ex- tended loops do respond to the largest events taking place in the core fields near their feet, they do not show a clear response to most smaller individual events nor to the overall envelope of coronal heating activity in the core fields at their feet as determined from longer-term observations. Thus, while it is clear that the extended loops' heating is being driven from their ends at the magnetic islands, much of this heating is apparently by some form of footpoint activity that is not strongly coupled to the heating in the footpoint core fields. One possibility is that the remote heating in the extended loops is driven by reconnection at the magnetic null over the island, and that this reconnection is driven mainly by core-field activity that produces little coronal heating within the core field itself, perhaps in the manner of the numerical simulations by Karpen, Antiochos, and DeVore.
HOT PLASMA FROM SOLAR ACTIVE REGION CORES: A TEST OF AC AND DC CORONAL HEATING MODELS?

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schmelz, J. T.; Christian, G. M.; Dhaliwal, R. S.

2015-06-20

Direct current (DC) models of solar coronal heating invoke magnetic reconnection to convert magnetic free energy into heat, whereas alternating current (AC) models invoke wave dissipation. In both cases the energy is supplied by photospheric footpoint motions. For a given footpoint velocity amplitude, DC models predict lower average heating rates but greater temperature variability when compared to AC models. Therefore, evidence of hot plasma (T > 5 MK) in the cores of active regions could be one of the ways for current observations to distinguish between AC and DC models. We have analyzed data from the X-Ray Telescope (XRT) andmore » the Atmospheric Imaging Assembly for 12 quiescent active region cores, all of which were observed in the XRT Be-thick channel. We did Differential Emission Measure (DEM) analysis and achieved good fits for each data set. We then artificially truncated the hot plasma of the DEM model at 5 MK and examined the resulting fits to the data. For some regions in our sample, the XRT intensities continued to be well-matched by the DEM predictions, even without the hot plasma. This truncation, however, resulted in unacceptable fits for the other regions. This result indicates that the hot plasma is present in these regions, even if the precise DEM distribution cannot be determined with the data available. We conclude that reconnection may be heating the hot plasma component of these active regions.« less
Paralleling power MOSFETs in their active region: Extended range of passively forced current sharing

NASA Technical Reports Server (NTRS)

Niedra, Janis M.

1989-01-01

A simple passive circuit that improves current balance in parallelled power MOSFETs that are not precisely matched and that are operated in their active region from a common gate drive are exhibited. A nonlinear circuit consisting of diodes and resistors generates the differential gate potential required to correct for unbalance while maintaining low losses over a range of current. Also application of a thin tape wound magnetic core to effect dynamic current balance is reviewed, and a simple theory is presented showing that for operation in the active region the branch currents tend to revert to their normal unbalanced values even if the core is not driven into saturation. Results of several comparative experiments are given.
Regional Climate Model Performance in Simulating Intra-seasonal and Interannual Variability of Indian Summer Monsoon

NASA Astrophysics Data System (ADS)

Bhatla, R.; Ghosh, Soumik; Mall, R. K.; Sinha, P.; Sarkar, Abhijit

2018-05-01

Establishment of Indian summer monsoon (ISM) rainfall passes through the different phases and is not uniformly distributed over the Indian subcontinent. This enhancement and reduction in daily rainfall anomaly over the Indian core monsoon region during peak monsoon season (i.e., July and August) are commonly termed as `active' and `break' phases of monsoon. The purpose of this study is to analyze REGional Climate Model (RegCM) results obtained using the most suitable convective parameterization scheme (CPS) to determine active/break phases of ISM. The model-simulated daily outgoing longwave radiation (OLR), mean sea level pressure (MSLP), and the wind at 850 hPa of spatial resolution of 0.5°× 0.5° are compared with NOAA, NCEP, and EIN15 data, respectively over the South-Asia Co-Ordinated Regional Climate Downscaling EXperiment (CORDEX) region. 25 years (1986-2010) composites of OLR, MSLP, and the wind at 850 hPa are considered from start to the dates of active/break phase and up to the end dates of active/break spell of monsoon. A negative/positive anomaly of OLR with active/break phase is found in simulations with CPSs Emanuel and Mix99 (Grell over land; Emanuel over ocean) over the core monsoon region as well as over Monsoon Convergence Zone (MCZ) of India. The appearance of monsoon trough during active phase over the core monsoon zone and its shifting towards the Himalayan foothills during break phase are also depicted well. Because of multi-cloud function over oceanic region and single cloud function over the land mass, the Mix99 CPSs perform well in simulating the synoptic features during the phases of monsoon.
Application of two different kinds of sera against the Proteus penneri lipopolysaccharide core region in search of epitopes determining cross-reactions with antibodies.

PubMed

Palusiak, Agata; Dzieciatkowska, Monika; Sidorczyk, Zygmunt

2008-01-01

Proteus penneri lipopolysaccharide (LPS) core regions are characterized by a greater structural variability than that observed in other Enterobacteriaceae. This fact and the small amount of published data concerning the serological activity of this part of P. penneri LPS prompted an examination of which fragment might determine cross-reactions with antibodies. To date, such epitopes have been found in the LPS core regions of P. mirabilis and P. vulgaris strains. Proteus sp. LPSs were tested with unabsorbed rabbit antisera by enzyme-linked immunosorbent assay (ELISA), sodium dodecyl sulfate polyacrylamide gel electrophoresis and Western blot, and once again by ELISA or passive immunohemolysis after the absorption of these antisera with selected LPSs. The serological studies of P. penneri 8 LPS demonstrated antibodies in the tested antisera recognizing a common epitope located in the core regions of six of the LPSs, i.e. P. penneri 8, 34, 133, 7, 14, and 15. Additionally, another type of antibody directed against some fragment of P. penneri 13 and the core regions of other LPSs investigated was observed in one antiserum. A distal, trisaccharide fragment of the P. penneri 8 LPS core region is suggested to determine the cross-reactions of the tested antisera with the six P. penneri LPSs.
Evidence that the Dictyostelium STAT protein Dd-STATa plays a role in the differentiation of inner basal disc cells and identification of a promoter element essential for expression in these cells.

PubMed

Shimada, Nao; Maruo, Toshinari; Maeda, Mineko; Urushihara, Hideko; Kawata, Takefumi

2005-02-01

Dd-STATa, a Dictyostelium homolog of the metazoan STAT (signal transducers and activators of transcription) proteins, is necessary in the slug for correct entry into culmination. Dd-STATa-null mutant fails to culminate and its phenotype correlates with the loss of a funnel-shaped core region, the pstAB core region, which expresses both the ecmA and ecmB genes. To understand how the differentiation of pstAB core cells is regulated, we identified an EST that is expressed in the core cells of normal slugs but down-regulated in the Dd-STATa-null mutant. This EST, SSK348, encodes a close homolog of the Dictyostelium acetyl-CoA synthetase (ACS). A promoter fragment of the cognate gene, aslA (acetyl-CoA synthetase-like A), was fused to a lacZ reporter and the expression pattern determined. As expected from the behavior of the endogenous aslA gene, the aslA::lacZ fusion gene is not expressed in Dd-STATa-null slugs. In parental cells, the aslA promoter is first activated in the funnel-shaped core cells located at the slug anterior, the "pstAB core." During culmination, the pstAB core cells move down, through the prespore cells, to form the inner part of the basal disc. As the spore mass climbs the stalk, the aslA gene comes to be expressed in cells of the upper and lower cups, structures that cradle the spore head. Deletion and point mutation analyses of the promoter identified an AT-rich sequence that is necessary for expression in the pstAB core. This acts in combination with repressor regions that prevent ectopic aslA expression in the pre-stalk regions of slugs and the stalks of culminants. Thus, this study confirms that Dd-STATa is necessary for the differentiation of pstAB core cells, by showing that it is needed for the activation of the aslA gene. It also identifies aslA promoter elements that are likely to be regulated, directly or indirectly, by Dd-STATa.
The JCMT Gould Belt Survey: first results from SCUBA-2 observations of the Cepheus Flare region

NASA Astrophysics Data System (ADS)

Pattle, K.; Ward-Thompson, D.; Kirk, J. M.; Di Francesco, J.; Kirk, H.; Mottram, J. C.; Keown, J.; Buckle, J.; Beaulieu, S. F.; Berry, D. S.; Broekhoven-Fiene, H.; Currie, M. J.; Fich, M.; Hatchell, J.; Jenness, T.; Johnstone, D.; Nutter, D.; Pineda, J. E.; Quinn, C.; Salji, C.; Tisi, S.; Walker-Smith, S.; Hogerheijde, M. R.; Bastien, P.; Bresnahan, D.; Butner, H.; Chen, M.; Chrysostomou, A.; Coudé, S.; Davis, C. J.; Drabek-Maunder, E.; Duarte-Cabral, A.; Fiege, J.; Friberg, P.; Friesen, R.; Fuller, G. A.; Graves, S.; Greaves, J.; Gregson, J.; Holland, W.; Joncas, G.; Knee, L. B. G.; Mairs, S.; Marsh, K.; Matthews, B. C.; Moriarty-Schieven, G.; Mowat, C.; Rawlings, J.; Richer, J.; Robertson, D.; Rosolowsky, E.; Rumble, D.; Sadavoy, S.; Thomas, H.; Tothill, N.; Viti, S.; White, G. J.; Wouterloot, J.; Yates, J.; Zhu, M.

2017-02-01

We present observations of the Cepheus Flare obtained as part of the James Clerk Maxwell Telescope (JCMT) Gould Belt Legacy Survey (GBLS) with the SCUBA-2 instrument. We produce a catalogue of sources found by SCUBA-2, and separate these into starless cores and protostars. We determine masses and densities for each of our sources, using source temperatures determined by the Herschel Gould Belt Survey. We compare the properties of starless cores in four different molecular clouds: L1147/58, L1172/74, L1251 and L1228. We find that the core mass functions for each region typically show shallower-than-Salpeter behaviour. We find that L1147/58 and L1228 have a high ratio of starless cores to Class II protostars, while L1251 and L1174 have a low ratio, consistent with the latter regions being more active sites of current star formation, while the former are forming stars less actively. We determine that if modelled as thermally supported Bonnor-Ebert spheres, most of our cores have stable configurations accessible to them. We estimate the external pressures on our cores using archival 13CO velocity dispersion measurements and find that our cores are typically pressure confined, rather than gravitationally bound. We perform a virial analysis on our cores, and find that they typically cannot be supported against collapse by internal thermal energy alone, due primarily to the measured external pressures. This suggests that the dominant mode of internal support in starless cores in the Cepheus Flare is either non-thermal motions or internal magnetic fields.
Mapping the brain correlates of borderline personality disorder: A functional neuroimaging meta-analysis of resting state studies.

PubMed

Visintin, Eleonora; De Panfilis, Chiara; Amore, Mario; Balestrieri, Matteo; Wolf, Robert Christian; Sambataro, Fabio

2016-11-01

Altered intrinsic function of the brain has been implicated in Borderline Personality Disorder (BPD). Nonetheless, imaging studies have yielded inconsistent alterations of brain function. To investigate the neural activity at rest in BPD, we conducted a set of meta-analyses of brain imaging studies performed at rest. A total of seven functional imaging studies (152 patients with BPD and 147 control subjects) were combined using whole-brain Signed Differential Mapping meta-analyses. Furthermore, two conjunction meta-analyses of neural activity at rest were also performed: with neural activity changes during emotional processing, and with structural differences, respectively. We found altered neural activity in the regions of the default mode network (DMN) in BPD. Within the regions of the midline core DMN, patients with BPD showed greater activity in the anterior as well as in the posterior midline hubs relative to controls. Conversely, in the regions of the dorsal DMN they showed reduced activity compared to controls in the right lateral temporal complex and bilaterally in the orbitofrontal cortex. Increased activity in the precuneus was observed both at rest and during emotional processing. Reduced neural activity at rest in lateral temporal complex was associated with smaller volume of this area. Heterogeneity across imaging studies. Altered activity in the regions of the midline core as well as of the dorsal subsystem of the DMN may reflect difficulties with interpersonal and affective regulation in BPD. These findings suggest that changes in spontaneous neural activity could underlie core symptoms in BPD. Copyright © 2016 Elsevier B.V. All rights reserved.
Emission Measure Distribution and Heating of Two Active Region Cores

NASA Technical Reports Server (NTRS)

Tripathi, Durgesh; Klimchuk, James A.; Mason, Helen E.

2011-01-01

Using data from the Extreme-ultraviolet Imaging Spectrometer aboard Hinode, we have studied the coronal plasma in the core of two active regions. Concentrating on the area between opposite polarity moss, we found emission measure distributions having an approximate power-law form EM/T(exp 2.4) from log T = 5.55 up to a peak at log T = 6.57. The observations are explained extremely well by a simple nanoflare model. However, in the absence of additional constraints, the observations could possibly also be explained by steady heating.
The Limit of Free Magnetic Energy in Active Regions

NASA Technical Reports Server (NTRS)

Moore, Ron; Falconer, David; Sterling, Alphonse

2012-01-01

By measuring from active-region magnetograms a proxy of the free energy in the active region fs magnetic field, it has been found previously that (1) there is an abrupt upper limit to the free energy the field can hold that increases with the amount of magnetic field in the active region, the active region fs magnetic flux content, and (2) the free energy is usually near its limit when the field explodes in a CME/flare eruption. That is, explosive active regions are concentrated in a main-sequence path bordering the free-energy ]limit line in (flux content, free-energy proxy) phase space. Here, from measurement of Marshall Space Flight Center vector magnetograms, we find the magnetic condition that underlies the free ]energy limit and the accompanying main sequence of explosive active regions. Using a suitable free ]energy proxy measured from vector magnetograms of 44 active regions, we find that (1) in active regions at and near their free ]energy limit, the ratio of magnetic-shear free energy to the non ]free magnetic energy the potential field would have is approximately 1 in the core field, the field rooted along the neutral line, and (2) this ratio is progressively less in active regions progressively farther below their free ]energy limit. This shows that most active regions in which this core-field energy ratio is much less than 1 cannot be triggered to explode; as this ratio approaches 1, most active regions become capable of exploding; and when this ratio is 1 or greater, most active regions are compelled to explode. From these results we surmise the magnetic condition that determines the free ]energy limit is the ratio of the free magnetic energy to the non-free energy the active region fs field would have were it completely relaxed to its potential ]field configuration, and that this ratio is approximately 1 at the free-energy limit and in the main sequence of explosive active regions.
Microflaring in Low-Lying Core Fields and Extended Coronal Heating in the Quiet Sun

NASA Technical Reports Server (NTRS)

Porter, Jason G.; Falconer, D. A.; Moore, Ronald L.

1999-01-01

We have previously reported analyses of Yohkoh SXT data examining the relationship between the heating of extended coronal loops (both within and stemming from active regions) and microflaring in core fields lying along neutral lines near their footpoints (J. G. Porter, D. A. Falconer, and R. L. Moore 1998, in Solar Jets and Coronal Plumes, ed. T. Guyenne, ESA SP-421, and references therein). We found a surprisingly poor correlation of intensity variations in the extended loops with individual microflares in the compact heated areas at their feet, despite considerable circumstancial evidence linking the heating processes in these regions. Now, a study of Fe XII image sequences from SOHO EIT show that similar associations of core field structures with the footpoints of very extended coronal features can be found in the quiet Sun. The morphology is consistent with the finding of Wang et al. (1997, ApJ 484, L75) that polar plumes are rooted at sites of mixed polarity in the magnetic network. We find that the upstairs/downstairs intensity variations often follow the trend, identified in the active region observations, of a weak correspondence. Apparently much of the coronal heating in the extended loops is driven by a type of core field magnetic activity that is "cooler" than the events having the coronal signature of microflares, i.e., activity that results in little heating within the core fields themselves. This work was funded by the Solar Physics Branch of NASA's Office of Space Science through the SR&T Program and the SEC Guest Investigator Program.
Coronal holes, large-scale magnetic field, and activity complexes in solar cycle 23

NASA Astrophysics Data System (ADS)

Tavastsherna, K. S.; Polyakow, E. V.

2014-12-01

A correlation among coronal holes (CH), a large-scale magnetic field (LMF), and activity complexes (AC) is studied in this work for 1997-2007 with the use of a coronal hole series obtained from observations at the Kitt Peak Observatory in the HeI 10830 Å line in 1975-2003 and SOHO/EIT-195 Å in 1996-2012 (Tlatov et al., 2014), synoptic Hα charts from Kislovodsk Mountain Astonomical Station, and the catalog of AC cores (Yazev, 2012). From the imposition of CH boundaries on Hα charts, which characterize the positions of neutral lines of the radial components of a large-scale solar magnetic field, it turns out that 70% of CH are located in unipolar regions of their sign during the above period, 10% are in the region of an opposite sign, and 20% are mainly very large CH, which are often crossed by the neutral lines of several unipolar regions. Data on mutual arrangement of CH and AC cores were obtained. It was shown that only some activity comples cores have genetic relationships with CH.
OUTFLOWS AND DARK BANDS AT ARCADE-LIKE ACTIVE REGION CORE BOUNDARIES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Scott, J. T.; Martens, P. C. H.; Tarr, L.

Observations from the EUV Imaging Spectrometer (EIS) on board Hinode have revealed outflows and non-thermal line broadening in low intensity regions at the edges of active regions (ARs). We use data from Hinode's EIS, Solar Dynamic Observatory's Atmospheric Imaging Assembly and Helioseismic and Magnetic Imager, and the Transition Region and Coronal Explorer instrument to investigate the boundaries of arcade-like AR cores for NOAA ARs 11112, 10978, and 9077. A narrow, low intensity region that is observed at the core's periphery as a dark band shows outflows and increased spectral line broadening. This dark band is found to exist for daysmore » and appears between the bright coronal loop structures of different coronal topologies. We find a case where the dark band region is formed between the magnetic field from emerging flux and the field of the pre-existing flux. A magnetic field extrapolation indicates that this dark band is coincident with the spine lines or magnetic separatrices in the extrapolated field. This occurs over unipolar regions where the brightened coronal field is separated in connectivity and topology. This separation does not appear to be infinitesimal and an initial estimate of the minimum distance of separation is found to be Almost-Equal-To 1.5-3.5 Mm.« less

When core competence is not enough: functional interplay of the DEAD-box helicase core with ancillary domains and auxiliary factors in RNA binding and unwinding.

PubMed

Rudolph, Markus G; Klostermeier, Dagmar

2015-08-01

DEAD-box helicases catalyze RNA duplex unwinding in an ATP-dependent reaction. Members of the DEAD-box helicase family consist of a common helicase core formed by two RecA-like domains. According to the current mechanistic model for DEAD-box mediated RNA unwinding, binding of RNA and ATP triggers a conformational change of the helicase core, and leads to formation of a compact, closed state. In the closed conformation, the two parts of the active site for ATP hydrolysis and of the RNA binding site, residing on the two RecA domains, become aligned. Closing of the helicase core is coupled to a deformation of the RNA backbone and destabilization of the RNA duplex, allowing for dissociation of one of the strands. The second strand remains bound to the helicase core until ATP hydrolysis and product release lead to re-opening of the core. The concomitant disruption of the RNA binding site causes dissociation of the second strand. The activity of the helicase core can be modulated by interaction partners, and by flanking N- and C-terminal domains. A number of C-terminal flanking regions have been implicated in RNA binding: RNA recognition motifs (RRM) typically mediate sequence-specific RNA binding, whereas positively charged, unstructured regions provide binding sites for structured RNA, without sequence-specificity. Interaction partners modulate RNA binding to the core, or bind to RNA regions emanating from the core. The functional interplay of the helicase core and ancillary domains or interaction partners in RNA binding and unwinding is not entirely understood. This review summarizes our current knowledge on RNA binding to the DEAD-box helicase core and the roles of ancillary domains and interaction partners in RNA binding and unwinding by DEAD-box proteins.
LMFBR fuel assembly design for HCDA fuel dispersal

DOEpatents

Lacko, Robert E.; Tilbrook, Roger W.

1984-01-01

A fuel assembly for a liquid metal fast breeder reactor having an upper axial blanket region disposed in a plurality of zones within the fuel assembly. The characterization of a zone is dependent on the height of the axial blanket region with respect to the active fuel region. The net effect of having a plurality of zones is to establish a dispersal flow path for the molten materials resulting during a core meltdown accident. Upward flowing molten material can escape from the core region and/or fuel assembly without solidifying on the surface of fuel rods due to the heat sink represented by blanket region pellets.
The feasibility study of small long-life gas cooled fast reactor with mixed natural Uranium/Thorium as fuel cycle input

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ariani, Menik; Su'ud, Zaki; Waris, Abdul

2012-06-06

A conceptual design study of Gas Cooled Fast Reactors with Modified CANDLE burn-up scheme has been performed. In this study, design GCFR with Helium coolant which can be continuously operated by supplying mixed Natural Uranium/Thorium without fuel enrichment plant or fuel reprocessing plant. The active reactor cores are divided into two region, Thorium fuel region and Uranium fuel region. Each fuel core regions are subdivided into ten parts (region-1 until region-10) with the same volume in the axial direction. The fresh Natural Uranium and Thorium is initially put in region-1, after one cycle of 10 years of burn-up it ismore » shifted to region-2 and the each region-1 is filled by fresh natural Uranium/Thorium fuel. This concept is basically applied to all regions in both cores area, i.e. shifted the core of i{sup th} region into i+1 region after the end of 10 years burn-up cycle. For the next cycles, we will add only Natural Uranium and Thorium on each region-1. The calculation results show the reactivity reached by mixed Natural Uranium/Thorium with volume ratio is 4.7:1. This reactor can results power thermal 550 MWth. After reactor start-up the operation, furthermore reactor only needs Natural Uranium/Thorium supply for continue operation along 100 years.« less
Magnetic Characteristics of Active Region Heating Observed with TRACE, SOHO/EIT, and Yohkoh/SXT

NASA Technical Reports Server (NTRS)

Porter, J. G.; Falconer, D. A.; Moore, R. L.; Rose, M. Franklin (Technical Monitor)

2001-01-01

Over the past several years, we have reported results from studies that have compared the magnetic structure and heating of the transition region and corona (both in active regions and in the quiet Sun) by combining X-ray and EUV images from Yohkoh and Solar and Heliospheric Observatory (SOHO) with photospheric magnetograms from ground-based observatories. Our findings have led us to the hypothesis that most heating throughout the corona is driven from near and below the base of the corona by eruptive microflares occurring in compact low-lying "core magnetic fields (i.e., fields rooted along and closely enveloping polarity inversion lines in the photospheric magnetic flux). We now extend these studies, comparing sequences of UV images from Transition Region and Coronal Explorer (TRACE) with longitudinal magnetograms from Kitt Peak and vector magnetograms from MUSIC. These comparisons confirm the previous results regarding the importance of core-field activity to active region heating. Activity in fields associated with satellite polarity inclusions and/or magnetically sheared configurations is especially prominent. This work is funded by NASA's Office of Space Science through the Sun-Earth Connection Guest Investigator Program and the Solar Physics Supporting Research and Technology Program.
Use of reservoir deposits to reconstruct the recent changes in sediment yields from a small granite catchment in the Yimeng Mountain region, China

NASA Astrophysics Data System (ADS)

Zhang, Yunqi; Long, Yi; Li, Bao; Xu, Shujian; Wang, Xiaoli; Liao, Jia

2017-09-01

Information on recent changes in sediment yields from small catchments provides a better understanding of temporal trends in soil loss from certain physical and human-influenced landscapes that have been subjected to recent environmental changes, and will help bridge the current knowledge gap that exists between hillslope erosion and sediment transport in rivers. The Yimeng Mountain region, characterized by alternating granite and limestone, is one of the most susceptible regions to soil erosion in northern China, and has been subjected to intensive anthropogenic activity in recent years. Soil loss from areas underlain by granite is particularly obvious, and is the main sediment source for the Yihe River. In this study, we used reservoir deposits to estimate the changes in sediment yields over the past 50 years from a small catchment underlain by granite, namely the Jiangzhuang catchment in the Yimeng Mountain region. Three cores were collected from the Jiangzhuang Reservoir in the catchment. The activities of 137Cs and 210Pbex at different depths, clay (grain size < 5 μm) contents, and sedimentary organic carbon (SOC) contents in the cores were analysed with reference to human activity and environmental change in the catchment. The chronologies of the cores were established by 137Cs and 210Pbex dating. The area-specific sediment yield (SSY) for different time periods since dam construction was estimated from each core by referring to the original capacity curve of the reservoir. The results indicate that the depth profiles of 137Cs, 210Pbex, clay, and SOC contents in cores from the Jiangzhuang Reservoir reflect the general history of human disturbances on the catchment over the past 50 years. The estimated SSY value from each core for each period ranged from 7.2 ± 2.7 to 23.7 ± 8.3 t ha- 1 y- 1, with a mean of 12.5 ± 4.6 t ha- 1 y- 1. SSY decreased during 1954-1972, and then showed a general tendency to increase. The temporal pattern of the sediment yield largely reflects the history of environmental change influenced by human activity in the catchment.
The mechanics and three-dimensional internal structure of active magmatic systems: Kilauea volcano, Hawaii.

USGS Publications Warehouse

Ryan, M.P.

1988-01-01

Interpretation of abundant seismic data suggest that Kilauea's primary conduit within the upper mantle is concentrically zoned to about 34-km depth. This zoned structure is inferred to contain a central core region of relatively higher permeability, surrounded by numerous dikes that are in intermittent hydraulic communication with each other and with the central core. During periods of relatively high magma transport, the entire cross section of the conduit is utilized. During periods of relatively low to moderate transport, however, only the central core is active.-from Author
On Heating Large Bright Coronal Loops by Magnetic Microexplosions at their Feet

NASA Technical Reports Server (NTRS)

Moore, Ronald L; Falconer, D. A.; Porter, Jason G.

1999-01-01

In previous work, by registering Yohkoh SXT coronal X-ray images with MSFC vector magnetograms, we found that: (1) many of the larger bright coronal loops rooted at one or both ends in an active region are rooted around magnetic islands of included polarity, (2) the core field encasing the neutral line encircling the island is strongly sheared, and (3) this sheared core field is the seat of frequent microflares. This suggests that the coronal heating in these extended bright loops is driven by many small explosive releases of stored magnetic energy from the sheared core field at their feet, some of which magnetic microexplosions also produce the microflare heating in the core fields. In this paper, we show that this scenario is feasible in terms of the energy Abstract: required for the observed coronal heating and the magnetic energy available in the observed sheared core fields. In a representative active region, from the X-ray and vector field data, we estimate the coronal heating consumption by a selected typical large bright loop, the coronal heating consumption by a typical microflare at the foot of this loop, the frequency of microflares at the foot, and the available magnetic energy in the microflaring core field. We find that: (1) the rate of magnetic energy release to power the microflares at the foot (approx. 6 x 10(ext 25)erg/s) is enough to also power the coronal heating in the body of the extended loop (approx. 2 x l0(exp 25 erg/s), and (2) there is enough stored magnetic energy in the sheared core field to sustain the microflaring and extended loop heating for about a day, which is a typical time for buildup of neutral-line magnetic shear in an active region. This work was funded by the Solar Physics Branch of NASA's Office of Space Science through the SR&T Program and the SEC Guest Investigator Program.
LATERAL OFFSET OF THE CORONAL MASS EJECTIONS FROM THE X-FLARE OF 2006 DECEMBER 13 AND ITS TWO PRECURSOR ERUPTIONS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sterling, Alphonse C.; Moore, Ronald L.; Harra, Louise K., E-mail: alphonse.sterling@nasa.gov, E-mail: ron.moore@nasa.gov, E-mail: lkh@mssl.ucl.ac.uk

2011-12-10

Two GOES sub-C-class precursor eruptions occurred within {approx}10 hr prior to and from the same active region as the 2006 December 13 X4.3-class flare. Each eruption generated a coronal mass ejection (CME) with center laterally far offset ({approx}> 45 Degree-Sign ) from the co-produced bright flare. Explaining such CME-to-flare lateral offsets in terms of the standard model for solar eruptions has been controversial. Using Hinode/X-Ray Telescope (XRT) and EUV Imaging Spectrometer (EIS) data, and Solar and Heliospheric Observatory (SOHO)/Large Angle and Spectrometric Coronagraph (LASCO) and Michelson Doppler Imager (MDI) data, we find or infer the following. (1) The first precursormore » was a 'magnetic-arch-blowout' event, where an initial standard-model eruption of the active region's core field blew out a lobe on one side of the active region's field. (2) The second precursor began similarly, but the core-field eruption stalled in the side-lobe field, with the side-lobe field erupting {approx}1 hr later to make the CME either by finally being blown out or by destabilizing and undergoing a standard-model eruption. (3) The third eruption, the X-flare event, blew out side lobes on both sides of the active region and clearly displayed characteristics of the standard model. (4) The two precursors were offset due in part to the CME originating from a side-lobe coronal arcade that was offset from the active region's core. The main eruption (and to some extent probably the precursor eruptions) was offset primarily because it pushed against the field of the large sunspot as it escaped outward. (5) All three CMEs were plausibly produced by a suitable version of the standard model.« less
Episodic specificity induction impacts activity in a core brain network during construction of imagined future experiences

PubMed Central

Madore, Kevin P.; Szpunar, Karl K.; Addis, Donna Rose; Schacter, Daniel L.

2016-01-01

Recent behavioral work suggests that an episodic specificity induction—brief training in recollecting the details of a past experience—enhances performance on subsequent tasks that rely on episodic retrieval, including imagining future experiences, solving open-ended problems, and thinking creatively. Despite these far-reaching behavioral effects, nothing is known about the neural processes impacted by an episodic specificity induction. Related neuroimaging work has linked episodic retrieval with a core network of brain regions that supports imagining future experiences. We tested the hypothesis that key structures in this network are influenced by the specificity induction. Participants received the specificity induction or one of two control inductions and then generated future events and semantic object comparisons during fMRI scanning. After receiving the specificity induction compared with the control, participants exhibited significantly more activity in several core network regions during the construction of imagined events over object comparisons, including the left anterior hippocampus, right inferior parietal lobule, right posterior cingulate cortex, and right ventral precuneus. Induction-related differences in the episodic detail of imagined events significantly modulated induction-related differences in the construction of imagined events in the left anterior hippocampus and right inferior parietal lobule. Resting-state functional connectivity analyses with hippocampal and inferior parietal lobule seed regions and the rest of the brain also revealed significantly stronger core network coupling following the specificity induction compared with the control. These findings provide evidence that an episodic specificity induction selectively targets episodic processes that are commonly linked to key core network regions, including the hippocampus. PMID:27601666
In Search of Functional Advantages of Knots in Proteins.

PubMed

Dabrowski-Tumanski, Pawel; Stasiak, Andrzej; Sulkowska, Joanna I

2016-01-01

We analysed the structure of deeply knotted proteins representing three unrelated families of knotted proteins. We looked at the correlation between positions of knotted cores in these proteins and such local structural characteristics as the number of intra-chain contacts, structural stability and solvent accessibility. We observed that the knotted cores and especially their borders showed strong enrichment in the number of contacts. These regions showed also increased thermal stability, whereas their solvent accessibility was decreased. Interestingly, the active sites within these knotted proteins preferentially located in the regions with increased number of contacts that also have increased thermal stability and decreased solvent accessibility. Our results suggest that knotting of polypeptide chains provides a favourable environment for the active sites observed in knotted proteins. Some knotted proteins have homologues without a knot. Interestingly, these unknotted homologues form local entanglements that retain structural characteristics of the knotted cores.
Tensile property improvement of TWIP-cored three-layer steel sheets fabricated by hot-roll-bonding with low-carbon steel or interstitial-free steel

PubMed Central

Park, Jaeyeong; Kim, Jung-Su; Kang, Minju; Sohn, Seok Su; Cho, Won Tae; Kim, Hyoung Seop; Lee, Sunghak

2017-01-01

TWIP-cored three-layer steel sheets were newly fabricated by hot rolling of TWIP steel sheet surrounded by low-carbon (LC) or interstitial-free (IF) steel sheets. TWIP/LC or TWIP/IF interfaces were well bonded without pores or voids, while a few pearlites were thinly formed along the interfaces. The strengths and elongation of the TWIP-cored sheets increased as the volume fraction of TWIP-cored region increased, and were also well matched with the ones calculated by a rule of mixtures based on volume fraction or force fraction. According to digital image correlation and electron back-scatter diffraction analyses, very high strain hardening effect in the initial deformation stage and active twin formation in the interfacial region beneficially affected the overall homogeneous deformation in the TWIP-cored sheets without any yield point phenomenon occurring in the LC sheet and serrations occurring in the TWIP sheet, respectively. These TWIP-cored sheets can cover a wide range of yield strength, tensile strength, and ductility levels, e.g., 320~498 MPa, 545~878 MPa, and 48~54%, respectively, by controlling the volume fraction of TWIP-cored region, and thus present new applications to multi-functional automotive steel sheets requiring excellent properties. PMID:28067318
Tensile property improvement of TWIP-cored three-layer steel sheets fabricated by hot-roll-bonding with low-carbon steel or interstitial-free steel

NASA Astrophysics Data System (ADS)

Park, Jaeyeong; Kim, Jung-Su; Kang, Minju; Sohn, Seok Su; Cho, Won Tae; Kim, Hyoung Seop; Lee, Sunghak

2017-01-01

TWIP-cored three-layer steel sheets were newly fabricated by hot rolling of TWIP steel sheet surrounded by low-carbon (LC) or interstitial-free (IF) steel sheets. TWIP/LC or TWIP/IF interfaces were well bonded without pores or voids, while a few pearlites were thinly formed along the interfaces. The strengths and elongation of the TWIP-cored sheets increased as the volume fraction of TWIP-cored region increased, and were also well matched with the ones calculated by a rule of mixtures based on volume fraction or force fraction. According to digital image correlation and electron back-scatter diffraction analyses, very high strain hardening effect in the initial deformation stage and active twin formation in the interfacial region beneficially affected the overall homogeneous deformation in the TWIP-cored sheets without any yield point phenomenon occurring in the LC sheet and serrations occurring in the TWIP sheet, respectively. These TWIP-cored sheets can cover a wide range of yield strength, tensile strength, and ductility levels, e.g., 320~498 MPa, 545~878 MPa, and 48~54%, respectively, by controlling the volume fraction of TWIP-cored region, and thus present new applications to multi-functional automotive steel sheets requiring excellent properties.
Tensile property improvement of TWIP-cored three-layer steel sheets fabricated by hot-roll-bonding with low-carbon steel or interstitial-free steel.

PubMed

Park, Jaeyeong; Kim, Jung-Su; Kang, Minju; Sohn, Seok Su; Cho, Won Tae; Kim, Hyoung Seop; Lee, Sunghak

2017-01-09

TWIP-cored three-layer steel sheets were newly fabricated by hot rolling of TWIP steel sheet surrounded by low-carbon (LC) or interstitial-free (IF) steel sheets. TWIP/LC or TWIP/IF interfaces were well bonded without pores or voids, while a few pearlites were thinly formed along the interfaces. The strengths and elongation of the TWIP-cored sheets increased as the volume fraction of TWIP-cored region increased, and were also well matched with the ones calculated by a rule of mixtures based on volume fraction or force fraction. According to digital image correlation and electron back-scatter diffraction analyses, very high strain hardening effect in the initial deformation stage and active twin formation in the interfacial region beneficially affected the overall homogeneous deformation in the TWIP-cored sheets without any yield point phenomenon occurring in the LC sheet and serrations occurring in the TWIP sheet, respectively. These TWIP-cored sheets can cover a wide range of yield strength, tensile strength, and ductility levels, e.g., 320~498 MPa, 545~878 MPa, and 48~54%, respectively, by controlling the volume fraction of TWIP-cored region, and thus present new applications to multi-functional automotive steel sheets requiring excellent properties.
Open magnetic fields in active regions

NASA Technical Reports Server (NTRS)

Svestka, Z.; Solodyna, C. V.; Howard, R.; Levine, R. H.

1977-01-01

Soft X-ray images and magnetograms of several active regions and coronal holes are examined which support the interpretation that some of the dark X-ray gaps seen between interconnecting loops and inner cores of active regions are foot points of open field lines inside the active regions. Characteristics of the investigated dark gaps are summarized. All the active regions with dark X-ray gaps at the proper place and with the correct polarity predicted by global potential extrapolation of photospheric magnetic fields are shown to be old active regions, indicating that field opening is accomplished only in a late phase of active-region development. It is noted that some of the observed dark gaps probably have nothing in common with open fields, but are either due to the decreased temperature in low-lying portions of interconnecting loops or are the roots of higher and less dense or cooler loops.
Widespread Enhancer Activity from Core Promoters.

PubMed

Medina-Rivera, Alejandra; Santiago-Algarra, David; Puthier, Denis; Spicuglia, Salvatore

2018-06-01

Gene expression in higher eukaryotes is precisely regulated in time and space through the interplay between promoters and gene-distal regulatory regions, known as enhancers. The original definition of enhancers implies the ability to activate gene expression remotely, while promoters entail the capability to locally induce gene expression. Despite the conventional distinction between them, promoters and enhancers share many genomic and epigenomic features. One intriguing finding in the gene regulation field comes from the observation that many core promoter regions display enhancer activity. Recent high-throughput reporter assays along with clustered regularly interspaced short palindromic repeats (CRISPR)/Cas9-related approaches have indicated that this phenomenon is common and might have a strong impact on our global understanding of genome organisation and gene expression regulation. Copyright © 2018 Elsevier Ltd. All rights reserved.
Brain regions associated with the acquisition of conditioned place preference for cocaine vs. social interaction.

PubMed

El Rawas, Rana; Klement, Sabine; Kummer, Kai K; Fritz, Michael; Dechant, Georg; Saria, Alois; Zernig, Gerald

2012-01-01

Positive social interaction could play an essential role in switching the preference of the substance dependent individual away from drug related activities. We have previously shown that conditioned place preference (CPP) for cocaine at the dose of 15 mg/kg and CPP for four 15-min episodes of social interaction were equally strong when rats were concurrently conditioned for place preference by pairing cocaine with one compartment and social interaction with the other. The aim of the present study was to investigate the differential activation of brain regions related to the reward circuitry after acquisition/expression of cocaine CPP or social interaction CPP. Our findings indicate that cocaine CPP and social interaction CPP activated almost the same brain regions. However, the granular insular cortex and the dorsal part of the agranular insular cortex were more activated after cocaine CPP, whereas the prelimbic cortex and the core subregion of the nucleus accumbens were more activated after social interaction CPP. These results suggest that the insular cortex appears to be potently activated after drug conditioning learning while activation of the prelimbic cortex-nucleus accumbens core projection seems to be preferentially involved in the conditioning to non-drug stimuli such as social interaction.
Decoding the content of recollection within the core recollection network and beyond.

PubMed

Thakral, Preston P; Wang, Tracy H; Rugg, Michael D

2017-06-01

Recollection - retrieval of qualitative information about a past event - is associated with enhanced neural activity in a consistent set of neural regions (the 'core recollection network') seemingly regardless of the nature of the recollected content. Here, we employed multi-voxel pattern analysis (MVPA) to assess whether retrieval-related functional magnetic resonance imaging (fMRI) activity in core recollection regions - including the hippocampus, angular gyrus, medial prefrontal cortex, retrosplenial/posterior cingulate cortex, and middle temporal gyrus - contain information about studied content and thus demonstrate retrieval-related 'reinstatement' effects. During study, participants viewed objects and concrete words that were subjected to different encoding tasks. Test items included studied words, the names of studied objects, or unstudied words. Participants judged whether the items were recollected, familiar, or new by making 'remember', 'know', and 'new' responses, respectively. The study history of remembered test items could be reliably decoded using MVPA in most regions, as well as from the dorsolateral prefrontal cortex, a region where univariate recollection effects could not be detected. The findings add to evidence that members of the core recollection network, as well as at least one neural region where mean signal is insensitive to recollection success, carry information about recollected content. Importantly, the study history of recognized items endorsed with a 'know' response could be decoded with equal accuracy. The results thus demonstrate a striking dissociation between mean signal and multi-voxel indices of recollection. Moreover, they converge with prior findings in suggesting that, as it is operationalized by classification-based MVPA, reinstatement is not uniquely a signature of recollection. Copyright © 2016 Elsevier Ltd. All rights reserved.
Core and body surface temperatures of nesting leatherback turtles (Dermochelys coriacea).

PubMed

Burns, Thomas J; McCafferty, Dominic J; Kennedy, Malcolm W

2015-07-01

Leatherback turtles (Dermochelys coriacea) are the largest species of marine turtle and the fourth most massive extant reptile. In temperate waters they maintain body temperatures higher than surrounding seawater through a combination of insulation, physiological, and behavioural adaptations. Nesting involves physical activity in addition to contact with warm sand and air, potentially presenting thermal challenges in the absence of the cooling effect of water, and data are lacking with which to understand their nesting thermal biology. Using non-contact methods (thermal imaging and infrared thermometry) to avoid any stress-related effects, we investigated core and surface temperature during nesting. The mean±SE core temperature was 31.4±0.05°C (newly emerged eggs) and was not correlated with environmental conditions on the nesting beach. Core temperature of leatherbacks was greater than that of hawksbill turtles (Eretmochelys imbricata) nesting at a nearby colony, 30.0±0.13°C. Body surface temperatures of leatherbacks showed regional variation, the lateral and dorsal regions of the head were warmest while the carapace was the coolest surface. Surface temperature increased during the early nesting phases, then levelled off or decreased during later phases with the rates of change varying between body regions. Body region, behavioural phase of nesting and air temperature were found to be the best predictors of surface temperature. Regional variation in surface temperature were likely due to alterations in blood supply, and temporal changes in local muscular activity of flippers during the different phases of nesting. Heat exchange from the upper surface of the turtle was dominated by radiative heat loss from all body regions and small convective heat gains to the carapace and front flippers. Copyright © 2015 Elsevier Ltd. All rights reserved.
Remembering what could have happened: Neural correlates of episodic counterfactual thinking

PubMed Central

De Brigard, F; Addis, D.R.; Ford, J.H.; Schacter, D.L.; Giovanello, K.S

2014-01-01

Recent evidence suggests that our capacities to remember the past and to imagine what might happen in the future largely depend on the same core brain network that includes the middle temporal lobe, the posterior cingulate/retrosplenial cortex, the inferior parietal lobe, the medial prefrontal cortex, and the lateral temporal cortex. However, the extent to which regions of this core brain network are also responsible for our capacity to think about what could have happened in our past, yet did not occur (i.e., episodic counterfactual thinking), is still unknown. The present study examined this issue. Using a variation of the experimental recombination paradigm (Addis et al., 2009), participants were asked both to remember personal past events and to envision alternative outcomes to such events while undergoing functional magnetic resonance imaging. Three sets of analyses were performed on the imaging data in order to investigate two related issues. First, a mean-centered spatiotemporal partial least square (PLS) analysis identified a pattern of brain activity across regions of the core network that was common to episodic memory and episodic counterfactual thinking. Second, a non-rotated PLS analysis identified two different patterns of brain activity for likely and unlikely episodic counterfactual thoughts, with the former showing significant overlap with the set of regions engaged during episodic recollection. Finally, a parametric modulation was conducted to explore the differential engagement of brain regions during counterfactual thinking, revealing that areas such as the parahippocampal gyrus and the right hippocampus were modulated by the subjective likelihood of counterfactual simulations. These results suggest that episodic counterfactual thinking engages regions that form the core brain network, and also that the subjective likelihood of our counterfactual thoughts modulates the engagement of different areas within this set of regions. PMID:23376052
The effects of therapeutic hip exercise with abdominal core activation on recruitment of the hip muscles.

PubMed

Chan, Mandy Ky; Chow, Ka Wai; Lai, Alfred Ys; Mak, Noble Kc; Sze, Jason Ch; Tsang, Sharon Mh

2017-07-21

Core stabilization has been utilized for rehabilitation and prevention of lower limb musculoskeletal injuries. Previous studies showed that activation of the abdominal core muscles enhanced the hip muscle activity in hip extension and abduction exercises. However, the lack of the direct measurement and quantification of the activation level of the abdominal core muscles during the execution of the hip exercises affect the level of evidence to substantiate the proposed application of core exercises to promote training and rehabilitation outcome of the hip region. The aim of the present study was to examine the effects of abdominal core activation, which is monitored directly by surface electromyography (EMG), on hip muscle activation while performing different hip exercises, and to explore whether participant characteristics such as gender, physical activity level and contractile properties of muscles, which is assessed by tensiomyography (TMG), have confounding effect to the activation of hip muscles in enhanced core condition. Surface EMG of bilateral internal obliques (IO), upper gluteus maximus (UGMax), lower gluteus maximus (LGMax), gluteus medius (GMed) and biceps femoris (BF) of dominant leg was recorded in 20 young healthy subjects while performing 3 hip exercises: Clam, side-lying hip abduction (HABD), and prone hip extension (PHE) in 2 conditions: natural core activation (NC) and enhanced core activation (CO). EMG signals normalized to percentage of maximal voluntary isometric contraction (%MVIC) were compared between two core conditions with the threshold of the enhanced abdominal core condition defined as >20%MVIC of IO. Enhanced abdominal core activation has significantly promoted the activation level of GMed in all phases of clam exercise (P < 0.05), and UGMax in all phases of PHE exercise (P < 0.05), LGMax in eccentric phases of all 3 exercises (P < 0.05), and BF in all phases of all 3 exercises except the eccentric phase of PHE exercise (P < 0.05). The %MVIC of UGMax was significantly higher than that of LGMax in all phases of clam and HABD exercises under both CO and NC conditions (P < 0.001) while the %MVIC of LGMax was significantly higher than UGMax in concentric phase of PHE exercise under NC condition (P = 0.003). Gender, physical activity level and TMG parameters were not major covariates to activation of hip muscles under enhanced core condition. Abdominal core activation enhances the hip muscles recruitment in Clam, HABD and PHE exercises, and this enhancement is correlated with higher physical activity and stiffer hip muscle. Our results suggest the potential application of abdominal core activation for lower limb rehabilitation since the increased activation of target hip muscles may enhance the therapeutic effects of hip strengthening exercises.

Cloud-cloud collision in the Galactic center 50 km s-1 molecular cloud

NASA Astrophysics Data System (ADS)

Tsuboi, Masato; Miyazaki, Atsushi; Uehara, Kenta

2015-12-01

We performed a search of star-forming sites influenced by external factors, such as SNRs, H II regions, and cloud-cloud collisions (CCCs), to understand the star-forming activity in the Galactic center region using the NRO Galactic Center Survey in SiO v = 0, J = 2-1, H13CO+J = 1-0, and CS J = 1-0 emission lines obtained with the Nobeyama 45 m telescope. We found a half-shell-like feature (HSF) with a high integrated line intensity ratio of ∫TB(SiO v = 0, J = 2-1)dv/∫TB(H13CO+J = 1-0)dv ˜ 6-8 in the 50 km s-1 molecular cloud; the HSF is a most conspicuous molecular cloud in the region and harbors an active star-forming site where several compact H II regions can be seen. The high ratio in the HSF indicates that the cloud contains huge shocked molecular gas. The HSF can be also seen as a half-shell feature in the position-velocity diagram. A hypothesis explaining the chemical and kinetic properties of the HSF is that the feature originates from a CCC. We analyzed the CS J = 1-0 emission line data obtained with the Nobeyama Millimeter Array to reveal the relation between the HSF and the molecular cloud cores in the cloud. We made a cumulative core mass function (CMF) of the molecular cloud cores within the HSF. The CMF in the CCC region is not truncated at least up to ˜2500 M⊙, although the CMF of the non-CCC region reaches the upper limit of ˜1500 M⊙. Most massive molecular cores with Mgas > 750 M⊙ are located only around the ridge of the HSF and adjoin the compact H II region. These may be a sign of massive star formation induced by CCCs in the Galactic center region.
Is there a core neural network in empathy? An fMRI based quantitative meta-analysis.

PubMed

Fan, Yan; Duncan, Niall W; de Greck, Moritz; Northoff, Georg

2011-01-01

Whilst recent neuroimaging studies have identified a series of different brain regions as being involved in empathy, it remains unclear concerning the activation consistence of these brain regions and their specific functional roles. Using MKDA, a whole-brain based quantitative meta-analysis of recent fMRI studies of empathy was performed. This analysis identified the dACC-aMCC-SMA and bilateral anterior insula as being consistently activated in empathy. Hypothesizing that what are here termed affective-perceptual and cognitive-evaluative forms of empathy might be characterized by different activity patterns, the neural activations in these forms of empathy were compared. The dorsal aMCC was demonstrated to be recruited more frequently in the cognitive-evaluative form of empathy, whilst the right anterior insula was found to be involved in the affective-perceptual form of empathy only. The left anterior insula was active in both forms of empathy. It was concluded that the dACC-aMCC-SMA and bilateral insula can be considered as forming a core network in empathy, and that cognitive-evaluative and affective-perceptual empathy can be distinguished at the level of regional activation. Copyright © 2010 Elsevier Ltd. All rights reserved.
Effect of sound intensity on tonotopic fMRI maps in the unanesthetized monkey.

PubMed

Tanji, Kazuyo; Leopold, David A; Ye, Frank Q; Zhu, Charles; Malloy, Megan; Saunders, Richard C; Mishkin, Mortimer

2010-01-01

The monkey's auditory cortex includes a core region on the supratemporal plane (STP) made up of the tonotopically organized areas A1, R, and RT, together with a surrounding belt and a lateral parabelt region. The functional studies that yielded the tonotopic maps and corroborated the anatomical division into core, belt, and parabelt typically used low-amplitude pure tones that were often restricted to threshold-level intensities. Here we used functional magnetic resonance imaging in awake rhesus monkeys to determine whether, and if so how, the tonotopic maps and the pattern of activation in core, belt, and parabelt are affected by systematic changes in sound intensity. Blood oxygenation level-dependent (BOLD) responses to groups of low- and high-frequency pure tones 3-4 octaves apart were measured at multiple sound intensity levels. The results revealed tonotopic maps in the auditory core that reversed at the putative areal boundaries between A1 and R and between R and RT. Although these reversals of the tonotopic representations were present at all intensity levels, the lateral spread of activation depended on sound amplitude, with increasing recruitment of the adjacent belt areas as the intensities increased. Tonotopic organization along the STP was also evident in frequency-specific deactivation (i.e. "negative BOLD"), an effect that was intensity-specific as well. Regions of positive and negative BOLD were spatially interleaved, possibly reflecting lateral inhibition of high-frequency areas during activation of adjacent low-frequency areas, and vice versa. These results, which demonstrate the strong influence of tonal amplitude on activation levels, identify sound intensity as an important adjunct parameter for mapping the functional architecture of auditory cortex.
Impairment of interferon regulatory factor-3 activation by hepatitis C virus core protein basic amino acid region 1.

PubMed

Inoue, Kazuaki; Tsukiyama-Kohara, Kyoko; Matsuda, Chiho; Yoneyama, Mitsutoshi; Fujita, Takashi; Kuge, Shusuke; Yoshiba, Makoto; Kohara, Michinori

2012-11-30

Interferon regulatory factor-3 (IRF-3), a key transcriptional factor in the type I interferon system, is frequently impaired by hepatitis C virus (HCV), in order to establish persistent infection. However, the exact mechanism by which the virus establishes persistent infection has not been fully understood yet. The present study aimed to investigate the effects of various HCV proteins on IRF-3 activation, and elucidate the underlying mechanisms. To achieve this, full-length HCV and HCV subgenomic constructs corresponding to structural and each of the nonstructural proteins were transiently transfected into HepG2 cells. IFN-β induction, plaque formation, and IRF-3 dimerization were elicited by Newcastle disease virus (NDV) infection. The expressions of IRF-3 homodimer and its monomer, Ser386-phosphorylated IRF-3, and HCV core protein were detected by immunofluorescence and western blotting. IFN-β mRNA expression was quantified by real-time PCR (RT-PCR), and IRF-3 activity was measured by the levels of IRF-3 dimerization and phosphorylation, induced by NDV infection or polyriboinosinic:polyribocytidylic acid [poly(I:C)]. Switching of the expression of the complete HCV genome as well as the core proteins, E1, E2, and NS2, suppressed IFN-β mRNA levels and IRF-3 dimerization, induced by NDV infection. Our study revealed a crucial region of the HCV core protein, basic amino acid region 1 (BR1), to inhibit IRF-3 dimerization as well as its phosphorylation induced by NDV infection and poly (I:C), thus interfering with IRF-3 activation. Therefore, our study suggests that rescue of the IRF-3 pathway impairment may be an effective treatment for HCV infection. Copyright © 2012 Elsevier Inc. All rights reserved.
Obesity and insulin resistance are associated with reduced activity in core memory regions of the brain.

PubMed

Cheke, Lucy G; Bonnici, Heidi M; Clayton, Nicola S; Simons, Jon S

2017-02-01

Increasing research in animals and humans suggests that obesity may be associated with learning and memory deficits, and in particular with reductions in episodic memory. Rodent models have implicated the hippocampus in obesity-related memory impairments, but the neural mechanisms underlying episodic memory deficits in obese humans remain undetermined. In the present study, lean and obese human participants were scanned using fMRI while completing a What-Where-When episodic memory test (the "Treasure-Hunt Task") that assessed the ability to remember integrated item, spatial, and temporal details of previously encoded complex events. In lean participants, the Treasure-Hunt task elicited significant activity in regions of the brain known to be important for recollecting episodic memories, such as the hippocampus, angular gyrus, and dorsolateral prefrontal cortex. Both obesity and insulin resistance were associated with significantly reduced functional activity throughout the core recollection network. These findings indicate that obesity is associated with reduced functional activity in core brain areas supporting episodic memory and that insulin resistance may be a key player in this association. Copyright © 2017 The Authors. Published by Elsevier Ltd.. All rights reserved.
Surface-Active Agents for Isolation of the Core Component of Avian Myeloblastosis Virus 1

PubMed Central

Stromberg, Kurt

1972-01-01

Sixty-one surface-active agents were evaluated in a procedure designed to assess their ability to remove the envelope from the core component of avian myeloblastosis virus (AMV). The procedure consisted of centrifugation of intact AMV through a series of sucrose gradients each containing an upper layer of agent at one of eight concentrations between 0.01 and 10%. The effectiveness of an agent in producing AMV cores was indicated by (i) the appearance of light-scattering bands in the region of core buoyant density in gradient tubes; (ii) the range of surfactant concentration over which these bands appeared; and (iii) an electron microscopy assessment by the negative-staining technique of the relative proportion of core to non-core material in each of these bands. Six nonionic surfactants were selected by this screening method for comparison in regard to recovery of core protein and endogenous ribonucleic acid (RNA)-dependent deoxyribonucleic acid (DNA) polymerase activity, as well as further morphologic evaluation by electron microscopy. The nonionic surfactants of the polyoxyethylene alcohol class (particularly, Sterox SL) were most effective. Nonionic surfactants of the polyoxyethylene alkylphenol class (particularly, Nonidet P-40) were also effective. Sterox SL and Nonidet P-40 each gave a more than fivefold increase in specific activity of endogenous RNA-dependent DNA polymerase, and each gave a low recovery of core protein. Sterox SL did not interfere to the extent that Nonidet P-40 did in procedures which involved spectrophotometric assay at 260 nm. The use of Sterox SL resulted in the least envelope contamination of core preparations by electron microscopy examination, the most recovery of protein and endogenous RNA-dependent DNA polymerase activity, and a core buoyant density in sucrose of 1.27 g/ml. Images PMID:4112071
Understanding CMEs using plasma diagnostics of the related dimmings

NASA Astrophysics Data System (ADS)

Vanninathan, Kamalam; Veronig, Astrid; Gomory, Peter; Dissauer, Karin; Temmer, Manuela; Hannah, Iain; Kontar, Eduard

2017-04-01

Coronal Mass Ejections (CMEs) are often associated with dimmings that are well observed in Extreme Ultra-violet (EUV) wavelengths. Such dimmings are suggested to represent the evacuation of mass that is carried out by CMEs and are a unique and indirect means to study CME properties. While Earth-directed CMEs (on-disk CMEs) are difficult to observe due to the bright background solar disk and projection effects, their corresponding dimmings are clearly discernible and ideally suited for analysis. Using data from the 6 EUV channels of Solar Dynamics Observatory/Atmospheric Imaging Assembly for Differential Emission Measure (DEM) diagnostics, we determine the plasma characteristics of the dimming region. These data are well suited for this kind of study due to the good temperature ranges covered by the multiple passbands of the instrument. We analyse 7 on-disk and 5 off-limb events and derive the weighted density and temperature as a function of time, from the DEMs. From such an analysis we differentiate 2 types of dimming regions: core and secondary dimmings. Core dimmings often occur in pairs lying on either sides of the active region and in opposite polarity regions while the secondary dimming is more extended. In both the regions the derived plasma parameters reach a minimum within 30-60 min after the flare. For each event the core dimming region shows a higher decrease in density and temperature than the corresponding secondary dimming regions. The values of these parameters remains low within the core dimming region for the entire duration of this study ( 10 hrs after the flare) while the secondary dimming region starts to show a gradual increase after 1-2 hrs. We also use spectroscopic data from Hinode/Extreme-Ultraviolet Imaging Spectrometer to differentiate core and secondary dimming regions. We find that the Fe XIII 202 Å line shows double component profiles within the core dimming region with strong blueshifts of 100 km/s while the secondary dimming region has weak upflows of 10 km/s. We conclude that the core dimming region corresponds to footpoints of the erupting flux rope from where there is continuous strong upflowing plasma for at least 10 hrs after the flare, while the secondary dimming region begins to refill within 1-2 hrs. These measurements can be used to deduce information about the mass of on-disk CMEs where white light measurements can fail. We also confirm that the dimmings are mainly caused by density decrease and not temperature changes. DEM analysis is a strong tool to decipher CME properties from dimming regions.
Transcription of fgf8 is regulated by activating and repressive cis-elements at the midbrain-hindbrain boundary in zebrafish embryos.

PubMed

Inoue, Fumitaka; Parvin, Mst Shahnaj; Yamasu, Kyo

2008-04-15

Fgf8 is expressed in the isthmic region of the developing brain, serving an organizing function in vertebrate embryos. We previously identified S4.2 downstream to the zebrafish fgf8 gene as a regulatory region that drives transcription in the anterior hindbrain. Here, we investigated the mechanism of fgf8 regulation by the S4.2 region during development. Reporter analyses in embryos revealed that S4.2 closely recapitulates fgf8 expression in the anteriormost hindbrain during somitogenesis. This region contains a sequence highly conserved in fgf8 of diverse vertebrates. Further analyses of S4.2 revealed a 342-bp core region composed of three subregions (#2, #3, and #4). Regions #3 and #4 drove expression broadly in the brain from the midbrain to r5 of the hindbrain, whereas a 28-bp sequence in #2 repressed ectopic expression in the midbrain and in r2 to r5. The enhancer function of S4.2 was absent in pax2a mutant embryos, while it was activated ectopically by pax2a misexpression in the hindbrain. We identified two sites in the core region that are bound by Pax2a in vitro and in vivo, the disruption of which abrogated the S4.2 activity. Thus, fgf8 expression in the anteriormost hindbrain involves activation and repression, with Pax2a as a pivotal regulator.
Constraints on active region coronal heating properties from observations and modeling of chromospheric, transition region, and coronal emission

NASA Astrophysics Data System (ADS)

Testa, P.; Polito, V.; De Pontieu, B.; Carlsson, M.; Reale, F.; Allred, J. C.; Hansteen, V. H.

2017-12-01

We investigate coronal heating properties in active region cores in non-flaring conditions, using high spatial, spectral, and temporal resolution chromospheric/transition region/coronal observations coupled with detailed modeling. We will focus, in particular, on observations with the Interface Region Imaging Spectrograph (IRIS), joint with observations with Hinode (XRT and EIS) and SDO/AIA. We will discuss how these observations and models (1D HD and 3D MHD, with the RADYN and Bifrost codes) provide useful diagnostics of the coronal heating processes and mechanisms of energy transport.
Fanconi Anemia Core Complex Gene Promoters Harbor Conserved Transcription Regulatory Elements

PubMed Central

Meier, Daniel; Schindler, Detlev

2011-01-01

The Fanconi anemia (FA) gene family is a recent addition to the complex network of proteins that respond to and repair certain types of DNA damage in the human genome. Since little is known about the regulation of this novel group of genes at the DNA level, we characterized the promoters of the eight genes (FANCA, B, C, E, F, G, L and M) that compose the FA core complex. The promoters of these genes show the characteristic attributes of housekeeping genes, such as a high GC content and CpG islands, a lack of TATA boxes and a low conservation. The promoters functioned in a monodirectional way and were, in their most active regions, comparable in strength to the SV40 promoter in our reporter plasmids. They were also marked by a distinctive transcriptional start site (TSS). In the 5′ region of each promoter, we identified a region that was able to negatively regulate the promoter activity in HeLa and HEK 293 cells in isolation. The central and 3′ regions of the promoter sequences harbor binding sites for several common and rare transcription factors, including STAT, SMAD, E2F, AP1 and YY1, which indicates that there may be cross-connections to several established regulatory pathways. Electrophoretic mobility shift assays and siRNA experiments confirmed the shared regulatory responses between the prominent members of the TGF-β and JAK/STAT pathways and members of the FA core complex. Although the promoters are not well conserved, they share region and sequence specific regulatory motifs and transcription factor binding sites (TBFs), and we identified a bi-partite nature to these promoters. These results support a hypothesis based on the co-evolution of the FA core complex genes that was expanded to include their promoters. PMID:21826217
Fanconi anemia core complex gene promoters harbor conserved transcription regulatory elements.

PubMed

Meier, Daniel; Schindler, Detlev

2011-01-01

The Fanconi anemia (FA) gene family is a recent addition to the complex network of proteins that respond to and repair certain types of DNA damage in the human genome. Since little is known about the regulation of this novel group of genes at the DNA level, we characterized the promoters of the eight genes (FANCA, B, C, E, F, G, L and M) that compose the FA core complex. The promoters of these genes show the characteristic attributes of housekeeping genes, such as a high GC content and CpG islands, a lack of TATA boxes and a low conservation. The promoters functioned in a monodirectional way and were, in their most active regions, comparable in strength to the SV40 promoter in our reporter plasmids. They were also marked by a distinctive transcriptional start site (TSS). In the 5' region of each promoter, we identified a region that was able to negatively regulate the promoter activity in HeLa and HEK 293 cells in isolation. The central and 3' regions of the promoter sequences harbor binding sites for several common and rare transcription factors, including STAT, SMAD, E2F, AP1 and YY1, which indicates that there may be cross-connections to several established regulatory pathways. Electrophoretic mobility shift assays and siRNA experiments confirmed the shared regulatory responses between the prominent members of the TGF-β and JAK/STAT pathways and members of the FA core complex. Although the promoters are not well conserved, they share region and sequence specific regulatory motifs and transcription factor binding sites (TBFs), and we identified a bi-partite nature to these promoters. These results support a hypothesis based on the co-evolution of the FA core complex genes that was expanded to include their promoters.
Influence of Na and Ga on the electrical properties of perfect 60° dislocations in Cu(In, Ga)Se2 thin-film photovoltaic absorbers

NASA Astrophysics Data System (ADS)

Barragan-Yani, D.; Albe, K.

2018-04-01

The segregation of GaIn and NaCu to perfect 60° dislocations in CuIn1-xGaxSe2 is investigated by means of density functional theory calculations. We find that the segregation process is mainly driven by the elastic interaction of both defect types with the strain field of the dislocation. GaIn moves into the negatively strained region, while NaCu is found in the positively strained region. We show that both defects affect the electronic defect levels induced by the dislocation core and GaIn is able to passivate the β-core in CuInSe2. This result indicates that β-cores are inactive in CuIn1-xGaxSe2. NaCu; however, they do not have a significant effect on the electrical properties of the studied dislocation cores. Therefore, the experimentally observed sodium segregation to dislocation cores in CuIn1-xGaxSe2 cannot be considered as the passivation mechanism of the electrically active cores in that material.
Brain regions associated with the acquisition of conditioned place preference for cocaine vs. social interaction

PubMed Central

El Rawas, Rana; Klement, Sabine; Kummer, Kai K.; Fritz, Michael; Dechant, Georg; Saria, Alois; Zernig, Gerald

2012-01-01

Positive social interaction could play an essential role in switching the preference of the substance dependent individual away from drug related activities. We have previously shown that conditioned place preference (CPP) for cocaine at the dose of 15 mg/kg and CPP for four 15-min episodes of social interaction were equally strong when rats were concurrently conditioned for place preference by pairing cocaine with one compartment and social interaction with the other. The aim of the present study was to investigate the differential activation of brain regions related to the reward circuitry after acquisition/expression of cocaine CPP or social interaction CPP. Our findings indicate that cocaine CPP and social interaction CPP activated almost the same brain regions. However, the granular insular cortex and the dorsal part of the agranular insular cortex were more activated after cocaine CPP, whereas the prelimbic cortex and the core subregion of the nucleus accumbens were more activated after social interaction CPP. These results suggest that the insular cortex appears to be potently activated after drug conditioning learning while activation of the prelimbic cortex—nucleus accumbens core projection seems to be preferentially involved in the conditioning to non-drug stimuli such as social interaction. PMID:23015784
Multiscale Aspects of Generation of High-Gamma Activity during Seizures in Human Neocortex123

PubMed Central

Marcuccilli, Charles J.; Ben-Mabrouk, Faiza; Lew, Sean M.; Goodman, Robert R.; McKhann, Guy M.; Frim, David M.; Kohrman, Michael H.; Schevon, Catherine A.; van Drongelen, Wim

2016-01-01

High-gamma (HG; 80-150 Hz) activity in macroscopic clinical records is considered a marker for critical brain regions involved in seizure initiation; it is correlated with pathological multiunit firing during neocortical seizures in the seizure core, an area identified by correlated multiunit spiking and low frequency seizure activity. However, the effects of the spatiotemporal dynamics of seizure on HG power generation are not well understood. Here, we studied HG generation and propagation, using a three-step, multiscale signal analysis and modeling approach. First, we analyzed concurrent neuronal and microscopic network HG activity in neocortical slices from seven intractable epilepsy patients. We found HG activity in these networks, especially when neurons displayed paroxysmal depolarization shifts and network activity was highly synchronized. Second, we examined HG activity acquired with microelectrode arrays recorded during human seizures (n = 8). We confirmed the presence of synchronized HG power across microelectrode records and the macroscale, both specifically associated with the core region of the seizure. Third, we used volume conduction-based modeling to relate HG activity and network synchrony at different network scales. We showed that local HG oscillations require high levels of synchrony to cross scales, and that this requirement is met at the microscopic scale, but not within macroscopic networks. Instead, we present evidence that HG power at the macroscale may result from harmonics of ongoing seizure activity. Ictal HG power marks the seizure core, but the generating mechanism can differ across spatial scales. PMID:27257623
Geochronology of Mudflow Deposits on the Mississippi River Delta Front, Louisiana, USA

NASA Astrophysics Data System (ADS)

Keller, G. P.; Bentley, S. J.; Xu, K.; Georgiou, I. Y.; Miner, M. D.; Obelcz, J.; Maloney, J. M.

2016-02-01

Short multicores (<50cm) and longer gravity cores (up to 3m) were collected seaward of the Southwest Pass of the Mississippi River Delta (Gulf of Mexico) and were analyzed to assess the frequency, extent, and potential causes of submarine mass wasting events. Cores were analyzed for radionuclide activity, grain size, and density at 2cm resolution, with x-radiography for the whole core. Short-term sedimentation rates calculated from 7Be are 2-12cm/y, while longer-term accumulation from 210Pb are only 1.3-5.5cm/y. In most cores, 210Pb activity steadily decreases downcore without displaying a "stairstep" nature. However, six cores have layers of low 210Pb activity stratigraphically above layers with higher activity. In one long core from a mudflow gully, 210Pb steadily decreases for the upper 90cm before stabilizing for the remaining 130cm. Clay content generally ranges between 25-40% and sand ranges between 5-15% with silt making up the rest of each sample. Sedimentation rates derived from 210Pb in the short cores indicate that proximity to the river mouth has stronger influence than depositional environment (mudflow gully, depositional lobe, prodelta). This finding may be explained by rapid sedimentation rates coupled with a reduced tropical cyclone activity over the delta in the last seven years (2006-2013). The regions of decreased 210Pb activity may be evidence of scavenging effects of plume sedimentation because they do not correspond with decreases in clay fraction. The zone of homogenized activity below 90cm in the gully core occurs at a depth equivalent to 18 years, indicating mixing on a decadal scale, potentially from mudflows. These results may be explained by a lack of recent mass failures corresponding with lulls in tropical cyclone activity over the delta, preceded by a period of more active hurricane-driven mudflow activity.
Simultaneous spatiotemporal mapping of in situ pH and bacterial activity within an intact 3D microcolony structure

NASA Astrophysics Data System (ADS)

Hwang, Geelsu; Liu, Yuan; Kim, Dongyeop; Sun, Victor; Aviles-Reyes, Alejandro; Kajfasz, Jessica K.; Lemos, Jose A.; Koo, Hyun

2016-09-01

Biofilms are comprised of bacterial-clusters (microcolonies) enmeshed in an extracellular matrix. Streptococcus mutans can produce exopolysaccharides (EPS)-matrix and assemble microcolonies with acidic microenvironments that can cause tooth-decay despite the surrounding neutral-pH found in oral cavity. How the matrix influences the pH and bacterial activity locally remains unclear. Here, we simultaneously analyzed in situ pH and gene expression within intact biofilms and measured the impact of damage to the surrounding EPS-matrix. The spatiotemporal changes of these properties were characterized at a single-microcolony level following incubation in neutral-pH buffer. The middle and bottom-regions as well as inner-section within the microcolony 3D structure were resistant to neutralization (vs. upper and peripheral-region), forming an acidic core. Concomitantly, we used a green fluorescent protein (GFP) reporter to monitor expression of the pH-responsive atpB (PatpB::gfp) by S. mutans within microcolonies. The atpB expression was induced in the acidic core, but sharply decreased at peripheral/upper microcolony regions, congruent with local pH microenvironment. Enzymatic digestion of the surrounding matrix resulted in nearly complete neutralization of microcolony interior and down-regulation of atpB. Altogether, our data reveal that biofilm matrix facilitates formation of an acidic core within microcolonies which in turn activates S. mutans acid-stress response, mediating both the local environment and bacterial activity in situ.
CORDEX Coordinated Output for Regional Evaluation

NASA Astrophysics Data System (ADS)

Gutowski, William; Giorgi, Filippo; Lake, Irene

2017-04-01

The Science Advisory Team for the Coordinated Regional Downscaling Experiment (CORDEX) has developed a baseline framework of specified regions, resolutions and simulation periods intended to provide a foundation for ongoing regional CORDEX activities: the CORDEX Coordinated Output for Regional Evaluation, or CORDEX-CORE. CORDEX-CORE was conceived in part to be responsive to IPCC needs for coordinated simulations that could provide regional climate downscaling (RCD) that yields fine-scale climate information beyond that resolved by GCMs. For each CORDEX region, a matrix of GCM-RCD experiments is designed based on the need to cover as much as possible different dimensions of the uncertainty space (e.g., different emissions and land-use scenarios, GCMs, RCD models and techniques). An appropriate set of driving GCMs can allow a program of simulations that efficiently addresses key scientific issues within CORDEX, while facilitating comparison and transfer of results and lessons learned across different regions. The CORDEX-CORE program seeks to provide, as much as possible, homogeneity across domains, so it is envisioned that a standard set of regional climate models (RCMs) and empirical statistical downscaling (ESD) methods will downscale a standard set of GCMs over all or at least most CORDEX domains for a minimum set of scenarios (high and low end). The focus is on historical climate simulations for the 20th century and projections for 21st century, implying that data would be needed minimally for the period 1950-2100 (but ideally 1900-2100). This foundational ensemble can be regionally enriched with further contributions (additional GCM-RCD pairs) by individual groups over their selected domains of interest. The RCM model resolution for these core experiments will be in the range of 10-20 km, a resolution that has been shown to provide substantial added value for a variety of climate variables and that represents a significant forward step compared in the CORDEX program. This presentation presents the vision and structure of CORDEX-CORE while also soliciting discussion on plans for implementing the program.
Educating Artists in Management--An Analysis of Art Education Programmes in DACH Region

ERIC Educational Resources Information Center

Bauer, Christine; Strauss, Christine

2015-01-01

Labour force in the art sector is characterised by high qualification, but low income for those people who perform the core contribution in art, i.e. the artists. As artists are typically self-dependent in managing their business, they should have managerial skills besides those skills necessary to perform their artistic core activities. If the…
Active core profile and transport modification by application of ion Bernstein wave power in the Princeton Beta Experiment-Modification

NASA Astrophysics Data System (ADS)

LeBlanc, B.; Batha, S.; Bell, R.; Bernabei, S.; Blush, L.; de la Luna, E.; Doerner, R.; Dunlap, J.; England, A.; Garcia, I.; Ignat, D.; Isler, R.; Jones, S.; Kaita, R.; Kaye, S.; Kugel, H.; Levinton, F.; Luckhardt, S.; Mutoh, T.; Okabayashi, M.; Ono, M.; Paoletti, F.; Paul, S.; Petravich, G.; Post-Zwicker, A.; Sauthoff, N.; Schmitz, L.; Sesnic, S.; Takahashi, H.; Talvard, M.; Tighe, W.; Tynan, G.; von Goeler, S.; Woskov, P.; Zolfaghari, A.

1995-03-01

Application of Ion Bernstein Wave Heating (IBWH) into the Princeton Beta Experiment-Modification (PBX-M) [Phys. Fluids B 2, 1271 (1990)] tokamak stabilizes sawtooth oscillations and generates peaked density profiles. A transport barrier, spatially correlated with the IBWH power deposition profile, is observed in the core of IBWH-assisted neutral beam injection (NBI) discharges. A precursor to the fully developed barrier is seen in the soft x-ray data during edge localized mode (ELM) activity. Sustained IBWH operation is conducive to a regime where the barrier supports large ∇ne, ∇Te, ∇νφ, and ∇Ti, delimiting the confinement zone. This regime is reminiscent of the H(high) mode, but with a confinement zone moved inward. The core region has better than H-mode confinement while the peripheral region is L(low)-mode-like. The peaked profile enhances NBI core deposition and increases nuclear reactivity. An increase in central Ti results from χi reduction (compared to the H mode) and better beam penetration. Bootstrap current fractions of up to 0.32-0.35 locally and 0.28 overall were obtained when an additional NBI burst is applied to this plasma.
The Drosophila Translational Control Element (TCE) Is Required for High-Level Transcription of Many Genes That Are Specifically Expressed in Testes

PubMed Central

Anderson, Ashley K.; Ohler, Uwe; Wassarman, David A.

2012-01-01

To investigate the importance of core promoter elements for tissue-specific transcription of RNA polymerase II genes, we examined testis-specific transcription in Drosophila melanogaster. Bioinformatic analyses of core promoter sequences from 190 genes that are specifically expressed in testes identified a 10 bp A/T-rich motif that is identical to the translational control element (TCE). The TCE functions in the 5′ untranslated region of Mst(3)CGP mRNAs to repress translation, and it also functions in a heterologous gene to regulate transcription. We found that among genes with focused initiation patterns, the TCE is significantly enriched in core promoters of genes that are specifically expressed in testes but not in core promoters of genes that are specifically expressed in other tissues. The TCE is variably located in core promoters and is conserved in melanogaster subgroup species, but conservation dramatically drops in more distant species. In transgenic flies, short (300–400 bp) genomic regions containing a TCE directed testis-specific transcription of a reporter gene. Mutation of the TCE significantly reduced but did not abolish reporter gene transcription indicating that the TCE is important but not essential for transcription activation. Finally, mutation of testis-specific TFIID (tTFIID) subunits significantly reduced the transcription of a subset of endogenous TCE-containing but not TCE-lacking genes, suggesting that tTFIID activity is limited to TCE-containing genes but that tTFIID is not an obligatory regulator of TCE-containing genes. Thus, the TCE is a core promoter element in a subset of genes that are specifically expressed in testes. Furthermore, the TCE regulates transcription in the context of short genomic regions, from variable locations in the core promoter, and both dependently and independently of tTFIID. These findings set the stage for determining the mechanism by which the TCE regulates testis-specific transcription and understanding the dual role of the TCE in translational and transcriptional regulation. PMID:22984601

The Drosophila Translational Control Element (TCE) is required for high-level transcription of many genes that are specifically expressed in testes.

PubMed

Katzenberger, Rebeccah J; Rach, Elizabeth A; Anderson, Ashley K; Ohler, Uwe; Wassarman, David A

2012-01-01

To investigate the importance of core promoter elements for tissue-specific transcription of RNA polymerase II genes, we examined testis-specific transcription in Drosophila melanogaster. Bioinformatic analyses of core promoter sequences from 190 genes that are specifically expressed in testes identified a 10 bp A/T-rich motif that is identical to the translational control element (TCE). The TCE functions in the 5' untranslated region of Mst(3)CGP mRNAs to repress translation, and it also functions in a heterologous gene to regulate transcription. We found that among genes with focused initiation patterns, the TCE is significantly enriched in core promoters of genes that are specifically expressed in testes but not in core promoters of genes that are specifically expressed in other tissues. The TCE is variably located in core promoters and is conserved in melanogaster subgroup species, but conservation dramatically drops in more distant species. In transgenic flies, short (300-400 bp) genomic regions containing a TCE directed testis-specific transcription of a reporter gene. Mutation of the TCE significantly reduced but did not abolish reporter gene transcription indicating that the TCE is important but not essential for transcription activation. Finally, mutation of testis-specific TFIID (tTFIID) subunits significantly reduced the transcription of a subset of endogenous TCE-containing but not TCE-lacking genes, suggesting that tTFIID activity is limited to TCE-containing genes but that tTFIID is not an obligatory regulator of TCE-containing genes. Thus, the TCE is a core promoter element in a subset of genes that are specifically expressed in testes. Furthermore, the TCE regulates transcription in the context of short genomic regions, from variable locations in the core promoter, and both dependently and independently of tTFIID. These findings set the stage for determining the mechanism by which the TCE regulates testis-specific transcription and understanding the dual role of the TCE in translational and transcriptional regulation.
Reconstruction of anthropogenic eutrophication in the region off the Changjiang Estuary and central Yellow Sea: From decades to centuries

NASA Astrophysics Data System (ADS)

Zhu, Zhuo-Yi; Wu, Ying; Zhang, Jing; Du, Jin-Zhou; Zhang, Guo-Sen

2014-01-01

Anthropogenic activities are known to induce estuarine and coastal eutrophication. However, the eutrophication history over a longer time scale (e.g., over hundreds of years) is often missing, and this perspective is important for an objective assessment of recent-decades anthropogenic activities. To reconstruct eutrophication history in this region, two sediment cores were taken, core E4 in the region off the Changjiang Estuary in the coast of East China Sea, and core E2 in the central Yellow Sea. High sedimentation rate (3.8 cm/yr) of core E4 enabled us to reconstruct a detailed anthropogenic eutrophication history for the past 70 years, while the history at least back to 1855 was further revealed via core E2. Sedimentary nitrogen isotopes (δ15N) in core E4 showed a gradually depleting trend from 5‰ (1930s) to 3.8‰ in the top, which is consistent with the increasing riverine nitrogen flux over the past few decades. A negative relationship was found between total sedimentary Chla (=preserved chlorophyll a+its degradation products) and δ15N (r2=0.68), suggesting the promotion of estuarine productivity by chemical fertilizer-N. Preserved diagnostic pigments ratio (peridinin/fucoxanthin) further suggests that after 1995, the influence of dinoflagellates has been increasing compared to diatoms. At a longer time scale (i.e., core E2), sedimentary δ15N also decreased from 5.1‰ (before 1855) to 4.4‰ (at top layer). As normalized fossil cyanobacterial pigment (zeaxanthin) showed a decreasing trend from before 1855 to the top of the core, we propose that the decreasing sedimentary δ15N after 1855 was not due to assimilation of atmospheric nitrogen, but due to excess nutrients input to the central Yellow Sea, which promoted primary production. This is further proved by preserved pheopigments, which continuously increased from 41.7 nmol g OC-1 (before 1855) to 251 nmol g OC-1 (at top layer) in core E2. Besides revealing the eutrophication history, big history events were also recorded, including the 1998 flood of the Changjiang River (core E4) and the shift of the Yellow River mouth in 1855 (core E2).
Galaxy And Mass Assembly (GAMA): the effect of galaxy group environment on active galactic nuclei

NASA Astrophysics Data System (ADS)

Gordon, Yjan A.; Pimbblet, Kevin A.; Owers, Matt S.; Bland-Hawthorn, Joss; Brough, Sarah; Brown, Michael J. I.; Cluver, Michelle E.; Croom, Scott M.; Holwerda, Benne W.; Loveday, Jonathan; Mahajan, Smriti; Wang, Lingyu

2018-04-01

In galaxy clusters, efficiently accreting active galactic nuclei (AGNs) are preferentially located in the infall regions of the cluster projected phase-space, and are rarely found in the cluster core. This has been attributed to both an increase in triggering opportunities for infalling galaxies, and a reduction of those mechanisms in the hot, virialized, cluster core. Exploiting the depth and completeness (98 per cent at r < 19.8 mag) of the Galaxy And Mass Assembly survey (GAMA), we probe down the group halo mass function to assess whether AGNs are found in the same regions in groups as they are in clusters. We select 451 optical AGNs from 7498 galaxies with log10(M*/M⊙) > 9.9 in 695 groups with 11.53 ≤ log10(M200/M⊙) ≤ 14.56 at z < 0.15. By analysing the projected phase-space positions of these galaxies, we demonstrate that when split both radially, and into physically derived infalling and core populations, AGN position within group projected phase-space is dependent on halo mass. For groups with log10(M200/M⊙) > 13.5, AGNs are preferentially found in the infalling galaxy population with 3.6σ confidence. At lower halo masses, we observe no difference in AGN fraction between core and infalling galaxies. These observations support a model where a reduced number of low-speed interactions, ram pressure stripping and intra-group/cluster medium temperature, the dominance of which increase with halo mass, work to inhibit AGN in the cores of groups and clusters with log10(M200/M⊙) > 13.5, but do not significantly affect nuclear activity in cores of less massive structures.
Alexandria's Eastern Harbor, Egypt: Pollen, microscopic charcoal, and the transition from natural to human-modified basin

USGS Publications Warehouse

Stanley, J.-D.; Bernhardt, C.E.

2010-01-01

Pollen and microscopic charcoal examined in Holocene sediment core samples record major environmental modifications affecting Alexandria's Eastern Harbor through time. We assess whether such changes on Egypt's coastal margin were influenced primarily by natural, or natural plus human, or primarily human factors. We focus on (1) the times when pollen assemblages and microscopic charcoal content changed in the core, (2) how they changed, and (3) why this occurred. The analysis takes into account the core's stratigraphy, regional climate variability, human history, and local archaeological record. Four pollenmicroscopic charcoal zones are identified. The earliest change occurred at ca. 6000 YBP, during Egypt's earlier Predynastic (Neolithic) period, coinciding with a lithologic break from sand to muddy sand. Pollen during this time indicates a transition to a much drier climate rather than effects of human activity. The second change in pollen occurred 3600-2900 YBP, during a period of continued aridity with no lithologic variation in this core interval. Pollen (cereal taxa, agricultural weeds, grape) and a sharp increase in microscopic charcoal indicate that human activity became prevalent at least 700 y before Alexander the Great's arrival in this region, and these results highlight the transition from a largely natural climatecontrolled environment to one influenced by both climate and anthropogenic activity. The third shift up-core in pollen assemblages is dated at ca. 2300 YBP, at the boundary between a sand and mud unit. It coincides with construction by the Ptolemies of the Heptastadion between Alexandria and Pharos Island. From this time onward, harbor sediment in the nearly enclosed catchment basin indicates a near-continuous record of dominant proximal human activity. ?? 2010 Coastal Education and Research Foundation.
Flow characteristics of Korea multi-purpose research reactor

DOE Office of Scientific and Technical Information (OSTI.GOV)

Heonil Kim; Hee Taek Chae; Byung Jin Jun

1995-09-01

The construction of Korea Multi-purpose Research Reactor (KMRR), a 30 MW{sub th} open-tank-in-pool type, is completed. Various thermal-hydraulic experiments have been conducted to verify the design characteristics of the KMRR. This paper describes the commissioning experiments to determine the flow distribution of KMRR core and the flow characteristics inside the chimney which stands on top of the core. The core flow is distributed to within {+-}6% of the average values, which is sufficiently flat in the sense that the design velocity in the fueled region is satisfied. The role of core bypass flow to confine the activated core coolant inmore » the chimney structure is confirmed.« less
Reversing cooling flows with AGN jets: shock waves, rarefaction waves and trailing outflows

NASA Astrophysics Data System (ADS)

Guo, Fulai; Duan, Xiaodong; Yuan, Ye-Fei

2018-01-01

The cooling flow problem is one of the central problems in galaxy clusters, and active galactic nucleus (AGN) feedback is considered to play a key role in offsetting cooling. However, how AGN jets heat and suppress cooling flows remains highly debated. Using an idealized simulation of a cool-core cluster, we study the development of central cooling catastrophe and how a subsequent powerful AGN jet event averts cooling flows, with a focus on complex gasdynamical processes involved. We find that the jet drives a bow shock, which reverses cooling inflows and overheats inner cool-core regions. The shocked gas moves outward in a rarefaction wave, which rarefies the dense core and adiabatically transports a significant fraction of heated energy to outer regions. As the rarefaction wave propagates away, inflows resume in the cluster core, but a trailing outflow is uplifted by the AGN bubble, preventing gas accumulation and catastrophic cooling in central regions. Inflows and trailing outflows constitute meridional circulations in the cluster core. At later times, trailing outflows fall back to the cluster centre, triggering central cooling catastrophe and potentially a new generation of AGN feedback. We thus envisage a picture of cool cluster cores going through cycles of cooling-induced contraction and AGN-induced expansion. This picture naturally predicts an anti-correlation between the gas fraction (or X-ray luminosity) of cool cores and the central gas entropy, which may be tested by X-ray observations.
Conceptual framework of public health surveillance and action and its application in health sector reform.

PubMed

McNabb, Scott J N; Chungong, Stella; Ryan, Mike; Wuhib, Tadesse; Nsubuga, Peter; Alemu, Wondi; Carande-Kulis, Vilma; Rodier, Guenael

2002-01-01

Because both public health surveillance and action are crucial, the authors initiated meetings at regional and national levels to assess and reform surveillance and action systems. These meetings emphasized improved epidemic preparedness, epidemic response, and highlighted standardized assessment and reform. To standardize assessments, the authors designed a conceptual framework for surveillance and action that categorized the framework into eight core and four support activities, measured with indicators. In application, country-level reformers measure both the presence and performance of the six core activities comprising public health surveillance (detection, registration, reporting, confirmation, analyses, and feedback) and acute (epidemic-type) and planned (management-type) responses composing the two core activities of public health action. Four support activities - communications, supervision, training, and resource provision - enable these eight core processes. National, multiple systems can then be concurrently assessed at each level for effectiveness, technical efficiency, and cost. This approach permits a cost analysis, highlights areas amenable to integration, and provides focused intervention. The final public health model becomes a district-focused, action-oriented integration of core and support activities with enhanced effectiveness, technical efficiency, and cost savings. This reform approach leads to sustained capacity development by an empowerment strategy defined as facilitated, process-oriented action steps transforming staff and the system.
Estimating selenium removal by sedimentation from the Great Salt Lake, Utah

USGS Publications Warehouse

Oliver, W.; Fuller, C.; Naftz, D.L.; Johnson, W.P.; Diaz, X.

2009-01-01

The mass of Se deposited annually to sediment in the Great Salt Lake (GSL) was estimated to determine the significance of sedimentation as a permanent Se removal mechanism. Lake sediment cores were used to qualitatively delineate sedimentation regions (very high to very low), estimate mass accumulation rates (MARs) and determine sediment Se concentrations. Sedimentation regions were defined by comparison of isopach contours of Holocene sediment thicknesses to linear sedimentation rates determined via analysis of 210Pb, 226Ra, 7Be and 137Cs activity in 20 short cores (<5 cm), yielding quantifiable results in 13 cores. MARs were developed via analysis of the same radioisotopes in eight long cores (>10 cm). These MARs in the upper 1-2 cm of each long core ranged from 0.019 to 0.105 gsed/cm2/a. Surface sediment Se concentrations in the upper 1 or 2 cm of each long core ranged from 0.79 to 2.47 mg/kg. Representative MARs and Se concentrations were used to develop mean annual Se removal by sedimentation in the corresponding sedimentation region. The spatially integrated Se sedimentation rate was estimated to be 624 kg/a within a range of uncertainty between 285 and 960 kg/a. Comparison to annual Se loading and other potential removal processes suggests burial by sedimentation is not the primary removal process for Se from the GSL. ?? 2009 Elsevier Ltd.
The Inhibitory Core of the Myostatin Prodomain: Its Interaction with Both Type I and II Membrane Receptors, and Potential to Treat Muscle Atrophy

PubMed Central

Ohsawa, Yutaka; Takayama, Kentaro; Nishimatsu, Shin-ichiro; Okada, Tadashi; Fujino, Masahiro; Fukai, Yuta; Murakami, Tatsufumi; Hagiwara, Hiroki; Itoh, Fumiko; Tsuchida, Kunihiro; Hayashi, Yoshio; Sunada, Yoshihide

2015-01-01

Myostatin, a muscle-specific transforming growth factor-β (TGF-β), negatively regulates skeletal muscle mass. The N-terminal prodomain of myostatin noncovalently binds to and suppresses the C-terminal mature domain (ligand) as an inactive circulating complex. However, which region of the myostatin prodomain is required to inhibit the biological activity of myostatin has remained unknown. We identified a 29-amino acid region that inhibited myostatin-induced transcriptional activity by 79% compared with the full-length prodomain. This inhibitory core resides near the N-terminus of the prodomain and includes an α-helix that is evolutionarily conserved among other TGF-β family members, but suppresses activation of myostatin and growth and differentiation factor 11 (GDF11) that share identical membrane receptors. Interestingly, the inhibitory core co-localized and co-immunoprecipitated with not only the ligand, but also its type I and type II membrane receptors. Deletion of the inhibitory core in the full-length prodomain removed all capacity for suppression of myostatin. A synthetic peptide corresponding to the inhibitory core (p29) ameliorates impaired myoblast differentiation induced by myostatin and GDF11, but not activin or TGF-β1. Moreover, intramuscular injection of p29 alleviated muscle atrophy and decreased the absolute force in caveolin 3-deficient limb-girdle muscular dystrophy 1C model mice. The injection suppressed activation of myostatin signaling and restored the decreased numbers of muscle precursor cells caused by caveolin 3 deficiency. Our findings indicate a novel concept for this newly identified inhibitory core of the prodomain of myostatin: that it not only suppresses the ligand, but also prevents two distinct membrane receptors from binding to the ligand. This study provides a strong rationale for the use of p29 in the amelioration of skeletal muscle atrophy in various clinical settings. PMID:26226340
The Inhibitory Core of the Myostatin Prodomain: Its Interaction with Both Type I and II Membrane Receptors, and Potential to Treat Muscle Atrophy.

PubMed

Ohsawa, Yutaka; Takayama, Kentaro; Nishimatsu, Shin-ichiro; Okada, Tadashi; Fujino, Masahiro; Fukai, Yuta; Murakami, Tatsufumi; Hagiwara, Hiroki; Itoh, Fumiko; Tsuchida, Kunihiro; Hayashi, Yoshio; Sunada, Yoshihide

2015-01-01

Myostatin, a muscle-specific transforming growth factor-β (TGF-β), negatively regulates skeletal muscle mass. The N-terminal prodomain of myostatin noncovalently binds to and suppresses the C-terminal mature domain (ligand) as an inactive circulating complex. However, which region of the myostatin prodomain is required to inhibit the biological activity of myostatin has remained unknown. We identified a 29-amino acid region that inhibited myostatin-induced transcriptional activity by 79% compared with the full-length prodomain. This inhibitory core resides near the N-terminus of the prodomain and includes an α-helix that is evolutionarily conserved among other TGF-β family members, but suppresses activation of myostatin and growth and differentiation factor 11 (GDF11) that share identical membrane receptors. Interestingly, the inhibitory core co-localized and co-immunoprecipitated with not only the ligand, but also its type I and type II membrane receptors. Deletion of the inhibitory core in the full-length prodomain removed all capacity for suppression of myostatin. A synthetic peptide corresponding to the inhibitory core (p29) ameliorates impaired myoblast differentiation induced by myostatin and GDF11, but not activin or TGF-β1. Moreover, intramuscular injection of p29 alleviated muscle atrophy and decreased the absolute force in caveolin 3-deficient limb-girdle muscular dystrophy 1C model mice. The injection suppressed activation of myostatin signaling and restored the decreased numbers of muscle precursor cells caused by caveolin 3 deficiency. Our findings indicate a novel concept for this newly identified inhibitory core of the prodomain of myostatin: that it not only suppresses the ligand, but also prevents two distinct membrane receptors from binding to the ligand. This study provides a strong rationale for the use of p29 in the amelioration of skeletal muscle atrophy in various clinical settings.
Synthetic Core Promoters as Universal Parts for Fine-Tuning Expression in Different Yeast Species

PubMed Central

2016-01-01

Synthetic biology and metabolic engineering experiments frequently require the fine-tuning of gene expression to balance and optimize protein levels of regulators or metabolic enzymes. A key concept of synthetic biology is the development of modular parts that can be used in different contexts. Here, we have applied a computational multifactor design approach to generate de novo synthetic core promoters and 5′ untranslated regions (UTRs) for yeast cells. In contrast to upstream cis-regulatory modules (CRMs), core promoters are typically not subject to specific regulation, making them ideal engineering targets for gene expression fine-tuning. 112 synthetic core promoter sequences were designed on the basis of the sequence/function relationship of natural core promoters, nucleosome occupancy and the presence of short motifs. The synthetic core promoters were fused to the Pichia pastoris AOX1 CRM, and the resulting activity spanned more than a 200-fold range (0.3% to 70.6% of the wild type AOX1 level). The top-ten synthetic core promoters with highest activity were fused to six additional CRMs (three in P. pastoris and three in Saccharomyces cerevisiae). Inducible CRM constructs showed significantly higher activity than constitutive CRMs, reaching up to 176% of natural core promoters. Comparing the activity of the same synthetic core promoters fused to different CRMs revealed high correlations only for CRMs within the same organism. These data suggest that modularity is maintained to some extent but only within the same organism. Due to the conserved role of eukaryotic core promoters, this rational design concept may be transferred to other organisms as a generic engineering tool. PMID:27973777
EIT Crinkles as Evidence for the Breakout Model of Solar Eruptions

NASA Technical Reports Server (NTRS)

Sterling, Alphonse C.; Moore, Ronald L.

2001-01-01

We present observations of two homologous flares in NOAA Active Region 8210 occurring on 1998 May 1 and 2, using EUV data from the EUV Imaging Telescope (EIT) on board the Solar and Heliospheric Observatory, high-resolution and high-time cadence images from the soft X-ray telescope on Yohkoh, images or fluxes from the hard X-ray telescope on Yohkoh and the BATSE experiment on board the Compton Gamma Ray Observatory, and Ca(XIX) soft X-ray spectra from the Bragg crystal spectrometer (BCS) on Yohkoh. Magnetograms indicate that the flares occurred in a complex magnetic topology, consisting of an emerging flux region (EFR) sandwiched between a sunspot to the west and a coronal hole to the east. In an earlier study we found that in EIT images, both flaring episodes showed the formation of a crinkle-like pattern of emission (EIT crinkles) occurring in the coronal hole vicinity, well away from a central 'core field' area near the EFR-sunspot boundary. With our expanded data set, here we find that most of the energetic activity occurs in the core region in both events, with some portions of the core brightening shortly after the onset of the EIT crinkles, and other regions of the core brightening several minutes later, coincident with a burst of hard X-rays; there are no obvious core brightenings prior to the onset of the EIT crinkles. These timings are consistent with the 'breakout model' of solar eruptions, whereby the emerging flux is initially constrained by a system of overlying magnetic field lines, and is able to erupt only after an opening develops in the overlying fields as a consequence of magnetic reconnection at a magnetic null point. In our case, the EIT crinkles would be a signature of this pre-impulsive phase magnetic reconnection, and brightening of the core only occurs after the core fields begin to escape through the newly created opening in the overlying fields. Morphology in soft X-ray images and properties in hard X-rays differ between the two events, with complexities that preclude a simple determination of the dynamics in the core at the times of eruption. From the BCS spectra, we find that the core region expends energy at a rate of approximately 10(exp 26) ergs/s during the time of the growth of the EIT crinkles; this rate is an upper limit to energy expended in the reconnections opening the overlying fields. Energy losses occur at an order of magnitude higher rate near the time of the peak of the events. There is little evidence of asymmetry in the spectra, consistent with the majority of the mass flows occurring normal to the line of sight. Both events have similar electron temperature dependencies on time.
Beta ray flux measuring device

DOEpatents

Impink, Jr., Albert J.; Goldstein, Norman P.

1990-01-01

A beta ray flux measuring device in an activated member in-core instrumentation system for pressurized water reactors. The device includes collector rings positioned about an axis in the reactor's pressure boundary. Activated members such as hydroballs are positioned within respective ones of the collector rings. A response characteristic such as the current from or charge on a collector ring indicates the beta ray flux from the corresponding hydroball and is therefore a measure of the relative nuclear power level in the region of the reactor core corresponding to the specific exposed hydroball within the collector ring.
Bypass flow computations on the LOFA transient in a VHTR

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tung, Yu-Hsin; Johnson, Richard W.; Ferng, Yuh-Ming

2014-01-01

Bypass flow in the prismatic gas-cooled very high temperature reactor (VHTR) is not intentionally designed to occur, but is present in the gaps between graphite blocks. Previous studies of the bypass flow in the core indicated that the cooling provided by flow in the bypass gaps had a significant effect on temperature and flow distributions for normal operating conditions. However, the flow and heat transports in the core are changed significantly after a Loss of Flow Accident (LOFA). This study aims to study the effect and role of the bypass flow after a LOFA in terms of the temperature andmore » flow distributions and for the heat transport out of the core by natural convection of the coolant for a 1/12 symmetric section of the active core which is composed of images and mirror images of two sub-region models. The two sub-region models, 9 x 1/12 and 15 x 1/12 symmetric sectors of the active core, are employed as the CFD flow models using computational grid systems of 70.2 million and 117 million nodes, respectively. It is concluded that the effect of bypass flow is significant for the initial conditions and the beginning of LOFA, but the bypass flow has little effect after a long period of time in the transient computation of natural circulation.« less
DOE Office of Scientific and Technical Information (OSTI.GOV)

Zeng, Yanli; Li, Hui; Zhang, Xiaoju

Apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3G (APOBEC3G, A3G) exert antiviral defense as an important factor of innate immunity. A variety of cytokines such as IFN-γ,IL2,IL15,IL7 could induce the transcription of A3G. However, the regulation of other nuclear factor on the transcription of A3G have not been reported at the present. To gain new insights into the transcriptional regulation of this restriction factor, we cloned and characterized the promoter region of A3G and investigate the modulation of USF1 gene on the transcription of A3G. We identified a 232 bp region that was sufficient to regulate the activity of full promoter. Transcriptionalmore » start sites (TSS) were identified by the luciferase reporter assays of plasmids containing full or shorter fragments of the A3G promoter. The results demonstrated that the core promoter of A3G is located within the region -159/-84 relative to the TSS. Transcriptional activity of A3G core promoter regulated by USF1 was dependent on an E-box (located at position -91/-86 relative to the major TSS) and was abolished after mutation of this DNA element. USF1 gene can take part in basal transcription regulation of the human A3G gene in hepatocyte, and the identified E-box represented a binding site for the USF1. - Highlights: • The core promoter of A3G is located within the region −159/−84 relative to the TSS. • Transcriptional activity of A3G core promoter regulated by USF1 was dependent on an E-box (located at position −91/−86 relative to the major TSS). • USF1 gene can take part in basal transcription regulation of the human A3G gene in hepatocyte.« less
Origin of the Sheared Magnetic Fields that Erupt in Flares and Coronal Mass Ejections

NASA Technical Reports Server (NTRS)

Moore, Ronald L.; Sterling, Alphonse C.

2006-01-01

From a search of the Yohkoh/SXT whole-Sun movie in the years 2000 and 2001, we found 37 flare-arcade events for which there were full-disk magnetograms from SOHO/MDI, coronagraph movies from SOHO/LASCO, and before and after full-disk chromospheric images from SOHOBIT and/or from ground-based observatories. For each event, the observations show or strongly imply that the flare arcade was produced in the usual way by the eruption of sheared core field (as a flux rope) from along the neutral line inside a mature bipolar magnetic arcade. Two-thirds (25) of these arcades had the normal leading-trailing magnetic polarity arrangement of the active regions in the hemisphere of the arcade, but the other third (12) had reversed polarity, their leading flux being the trailing-polarity remnant of one or more old active regions and their trailing flux being the leading-polarity remnant of one or more other old active regions. From these observations, we conclude: (1) The sheared core field in a reversed-polarity arcade must be formed by processes in and above the photosphere, not by the emergence of a twisted flux rope bodily from below the photosphere. (2) The sheared core fields in the normal-polarity arcades were basically the same as those in the reversed-polarity arcades: both showed similar sigmoidal form and produced similar explosions (similar flares and CMEs). (3) Hence, the sheared core fields in normal-polarity mature arcades are likely formed mainly by the same processes as in reversed-polarity arcades. (4) These processes should be discernible in high-resolution magnetogram sequences and movies of the photosphere, chromosphere, and corona such those to come from Solar-B
Co-expression of DKK-1 and Sclerostin in Subchondral Bone of the Proximal Femoral Heads from Osteoarthritic Hips.

PubMed

Zarei, Allahdad; Hulley, Philippa A; Sabokbar, Afsie; Javaid, M Kassim

2017-06-01

Osteoarthritis (OA) is a progressively degenerative joint disease influenced by structural and metabolic factors. There is growing evidence that subchondral bone is involved in both symptomatic and structural progression in OA. The Wnt pathway has been implicated in the progression of OA but the expression and function of the Wnt inhibitors, Dikkopf (DKK-1) and sclerostin (SOST), are unclear. We examined the regional distribution of DKK-1 and SOST in subchondral bone of the femoral head using resection specimens following arthroplasty in patients presenting with end-stage OA. Cylindrical cores for immunohistochemistry were taken through midpoint of full thickness cartilage defect, partial cartilage defect, through base of osteophyte and through macroscopically normal cartilage. Subchondral bone was thickest in cores taken from regions with full cartilage defect and thinnest in cores taken from osteophyte regions. In subchondral bone, expression of both DKK-1 and SOST was observed exclusively in osteocytes. Expression was highest in subchondral bone in cores taken from regions with partial but not full thickness cartilage defects. DKK-1 but not SOST was expressed by chondrocytes in cores with macroscopically normal cartilage. The current study describes the regional cellular distribution of SOST and DKK-1 in hip OA. Expression was highest in the osteocytes in bone underlying partial thickness cartilage defects. It is however not clear if this is a cause or a consequence of alterations in the overlying cartilage. However, it is suggestive of an active remodeling process which might be targeted by disease-modifying agents.
An Assessment of Magnetic Conditions for Strong Coronal Heating in Solar Active Regions by Comparing Observed Loops with Computed Potential Field Lines

NASA Technical Reports Server (NTRS)

Gary, G. A.; Moore, R. L.; Porter, J. G.; Falconer, D. A.

1999-01-01

We report further results on the magnetic origins of coronal heating found from registering coronal images with photospheric vector magnetograms. For two complementary active regions, we use computed potential field lines to examine the global non-potentiality of bright extended coronal loops and the three-dimensional structure of the magnetic field at their feet, and assess the role of these magnetic conditions in the strong coronal heating in these loops. The two active regions are complementary, in that one is globally potential and the other is globally nonpotential, while each is predominantly bipolar, and each has an island of included polarity in its trailing polarity domain. We find the following: (1) The brightest main-arch loops of the globally potential active region are brighter than the brightest main- arch loops of the globally strongly nonpotential active region. (2) In each active region, only a few of the mainarch magnetic loops are strongly heated, and these are all rooted near the island. (3) The end of each main-arch bright loop apparently bifurcates above the island, so that it embraces the island and the magnetic null above the island. (4) At any one time, there are other main-arch magnetic loops that embrace the island in the same manner as do the bright loops but that are not selected for strong coronal heating. (5) There is continual microflaring in sheared core fields around the island, but the main-arch bright loops show little response to these microflares. From these observational and modeling results we draw the following conclusions: (1) The heating of the main-arch bright loops arises mainly from conditions at the island end of these loops and not from their global non-potentiality. (2) There is, at most, only a loose coupling between the coronal heating in the bright loops of the main arch and the coronal heating in the sheared core fields at their feet, although in both the heating is driven by conditions/events in and around the island. (3) The main-arch bright loops are likely to be heated via reconnection driven at the magnetic null over the island. The details of how and where (along the null line) the reconnection is driven determine which of the split-end loops are selected for strong heating. (4) The null does not appear to be directly involved in the heating of the sheared core fields or in the heating of an extended loop rooted in the island. Rather, these all appear to be heated by microflares in the sheared core field.
WHY IS THE GREAT SOLAR ACTIVE REGION 12192 FLARE-RICH BUT CME-POOR?

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sun, Xudong; Bobra, Monica G.; Hoeksema, J. Todd

Solar active region (AR) 12192 of 2014 October hosts the largest sunspot group in 24 years. It is the most prolific flaring site of Cycle 24 so far, but surprisingly produced no coronal mass ejection (CME) from the core region during its disk passage. Here, we study the magnetic conditions that prevented eruption and the consequences that ensued. We find AR 12192 to be “big but mild”; its core region exhibits weaker non-potentiality, stronger overlying field, and smaller flare-related field changes compared to two other major flare-CME-productive ARs (11429 and 11158). These differences are present in the intensive-type indices (e.g.,more » means) but generally not the extensive ones (e.g., totals). AR 12192's large amount of magnetic free energy does not translate into CME productivity. The unexpected behavior suggests that AR eruptiveness is limited by some relative measure of magnetic non-potentiality over the restriction of background field, and that confined flares may leave weaker photospheric and coronal imprints compared to their eruptive counterparts.« less
PACAP38 Differentially Effects Genes and CRMP2 Protein Expression in Ischemic Core and Penumbra Regions of Permanent Middle Cerebral Artery Occlusion Model Mice Brain

PubMed Central

Hori, Motohide; Nakamachi, Tomoya; Shibato, Junko; Rakwal, Randeep; Tsuchida, Masachi; Shioda, Seiji; Numazawa, Satoshi

2014-01-01

Pituitary adenylate-cyclase activating polypeptide (PACAP) has neuroprotective and axonal guidance functions, but the mechanisms behind such actions remain unclear. Previously we examined effects of PACAP (PACAP38, 1 pmol) injection intracerebroventrically in a mouse model of permanent middle cerebral artery occlusion (PMCAO) along with control saline (0.9% NaCl) injection. Transcriptomic and proteomic approaches using ischemic (ipsilateral) brain hemisphere revealed differentially regulated genes and proteins by PACAP38 at 6 and 24 h post-treatment. However, as the ischemic hemisphere consisted of infarct core, penumbra, and non-ischemic regions, specificity of expression and localization of these identified molecular factors remained incomplete. This led us to devise a new experimental strategy wherein, ischemic core and penumbra were carefully sampled and compared to the corresponding contralateral (healthy) core and penumbra regions at 6 and 24 h post PACAP38 or saline injections. Both reverse transcription-polymerase chain reaction (RT-PCR) and Western blotting were used to examine targeted gene expressions and the collapsin response mediator protein 2 (CRMP2) protein profiles, respectively. Clear differences in expression of genes and CRMP2 protein abundance and degradation product/short isoform was observed between ischemic core and penumbra and also compared to the contralateral healthy tissues after PACAP38 or saline treatment. Results indicate the importance of region-specific analyses to further identify, localize and functionally analyse target molecular factors for clarifying the neuroprotective function of PACAP38. PMID:25257527

TRIGGERED STAR FORMATION SURROUNDING WOLF-RAYET STAR HD 211853

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu Tie; Wu Yuefang; Zhang Huawei

The environment surrounding Wolf-Rayet (W-R) star HD 211853 is studied in molecular, infrared, as well as radio, and H I emission. The molecular ring consists of well-separated cores, which have a volume density of 10{sup 3} cm{sup -3} and kinematic temperature {approx}20 K. Most of the cores are under gravitational collapse due to external pressure from the surrounding ionized gas. From the spectral energy distribution modeling toward the young stellar objects, the sequential star formation is revealed on a large scale in space spreading from the W-R star to the molecular ring. A small-scale sequential star formation is revealed towardmore » core 'A', which harbors a very young star cluster. Triggered star formations are thus suggested. The presence of the photodissociation region, the fragmentation of the molecular ring, the collapse of the cores, and the large-scale sequential star formation indicate that the 'collect and collapse' process functions in this region. The star-forming activities in core 'A' seem to be affected by the 'radiation-driven implosion' process.« less
Long-term survival and regeneration of neuronal and vasculature cells inside the core region after ischemic stroke in adult mice.

PubMed

Jiang, Michael Qize; Zhao, Ying-Ying; Cao, Wenyuan; Wei, Zheng Zachory; Gu, Xiaohuan; Wei, Ling; Yu, Shan Ping

2017-07-01

Focal cerebral ischemia results in an ischemic core surrounded by the peri-infarct region (penumbra). Most research attention has been focused on penumbra while the pattern of cell fates inside the ischemic core is poorly defined. In the present investigation, we tested the hypothesis that, inside the ischemic core, some neuronal and vascular cells could survive the initial ischemic insult while regenerative niches might exist many days after stroke in the adult brain. Adult mice were subjected to focal cerebral ischemia induced by permanent occlusion of distal branches of the middle cerebral artery (MCA) plus transient ligations of bilateral common carotid artery (CCA). The ischemic insult uniformly reduced the local cerebral blood flow (LCBF) by 90%. Massive cell death occurred due to multiple mechanisms and a significant infarction was cultivated in the ischemic cortex 24 h later. Nevertheless, normal or even higher levels of brain-derived neurotrophic factor (BDNF) and vascular endothelial growth factor (VEGF) persistently remained in the core tissue, some NeuN-positive and Glut-1/College IV-positive cells with intact ultrastructural features resided in the core 7-14 days post stroke. BrdU-positive but TUNEL-negative neuronal and endothelial cells were detected in the core where extensive extracellular matrix infrastructure developed. Meanwhile, GFAP-positive astrocytes accumulated in the penumbra and Iba-1-positive microglial/macrophages invaded the core several days after stroke. The long term survival of neuronal and vascular cells inside the ischemic core was also seen after a severe ischemic stroke induced by permanent embolic occlusion of the MCA. We demonstrate that a therapeutic intervention of pharmacological hypothermia could save neurons/endothelial cells inside the core. These data suggest that the ischemic core is an actively regulated brain region with residual and newly formed viable neuronal and vascular cells acutely and chronically after at least some types of ischemic strokes. © 2016 International Society of Neuropathology.
Neural Correlates of Belief and Emotion Attribution in Schizophrenia.

PubMed

Lee, Junghee; Horan, William P; Wynn, Jonathan K; Green, Michael F

2016-01-01

Impaired mental state attribution is a core social cognitive deficit in schizophrenia. With functional magnetic resonance imaging (fMRI), this study examined the extent to which the core neural system of mental state attribution is involved in mental state attribution, focusing on belief attribution and emotion attribution. Fifteen schizophrenia outpatients and 14 healthy controls performed two mental state attribution tasks in the scanner. In a Belief Attribution Task, after reading a short vignette, participants were asked infer either the belief of a character (a false belief condition) or a physical state of an affair (a false photograph condition). In an Emotion Attribution Task, participants were asked either to judge whether character(s) in pictures felt unpleasant, pleasant, or neutral emotion (other condition) or to look at pictures that did not have any human characters (view condition). fMRI data were analyzing focusing on a priori regions of interest (ROIs) of the core neural systems of mental state attribution: the medial prefrontal cortex (mPFC), temporoparietal junction (TPJ) and precuneus. An exploratory whole brain analysis was also performed. Both patients and controls showed greater activation in all four ROIs during the Belief Attribution Task than the Emotion Attribution Task. Patients also showed less activation in the precuneus and left TPJ compared to controls during the Belief Attribution Task. No significant group difference was found during the Emotion Attribution Task in any of ROIs. An exploratory whole brain analysis showed a similar pattern of neural activations. These findings suggest that while schizophrenia patients rely on the same neural network as controls do when attributing beliefs of others, patients did not show reduced activation in the key regions such as the TPJ. Further, this study did not find evidence for aberrant neural activation during emotion attribution or recruitment of compensatory brain regions in schizophrenia.
10 CFR 960.3-1-4-2 - Site nomination for characterization.

Code of Federal Regulations, 2012 CFR

2012-01-01

... testing of core samples for the evaluation of geochemical and engineering rock properties, and chemical... industrial activities; and extrapolations of regional data to estimate site-specific characteristics and...
10 CFR 960.3-1-4-2 - Site nomination for characterization.

Code of Federal Regulations, 2013 CFR

2013-01-01

... testing of core samples for the evaluation of geochemical and engineering rock properties, and chemical... industrial activities; and extrapolations of regional data to estimate site-specific characteristics and...
10 CFR 960.3-1-4-2 - Site nomination for characterization.

Code of Federal Regulations, 2011 CFR

2011-01-01

... testing of core samples for the evaluation of geochemical and engineering rock properties, and chemical... industrial activities; and extrapolations of regional data to estimate site-specific characteristics and...
10 CFR 960.3-1-4-2 - Site nomination for characterization.

Code of Federal Regulations, 2014 CFR

2014-01-01

... testing of core samples for the evaluation of geochemical and engineering rock properties, and chemical... industrial activities; and extrapolations of regional data to estimate site-specific characteristics and...
Distribution of water in the G327.3-0.6 massive star-forming region

NASA Astrophysics Data System (ADS)

Leurini, S.; Herpin, F.; van der Tak, F.; Wyrowski, F.; Herczeg, G. J.; van Dishoeck, E. F.

2017-06-01

Aims: Following our past study of the distribution of warm gas in the G327.3-0.6 massive star-forming region, we aim here at characterizing the large-scale distribution of water in this active region of massive star formation made of individual objects in different evolutionary phases. We investigate possible variations of the water abundance as a function of evolution. Methods: We present Herschel/PACS (4'× 4') continuum maps at 89 and179 μm encompassing the whole region (Hii region and the infrared dark cloud, IRDC) and an APEX/SABOCA (2'× 2') map at 350 μm of the IRDC. New spectral Herschel/HIFI maps toward the IRDC region covering the low-energy water lines at 987 and 1113 GHz (and their H218O counterparts) are also presented and combined with HIFI pointed observations toward the G327 hot core region. We infer the physical properties of the gas through optical depth analysis and radiative transfer modeling of the HIFI lines. Results: The distribution of the continuum emission at 89 and 179 μm follows the thermal continuum emission observed at longer wavelengths, with a peak at the position of the hot core and a secondary peak in the Hii region, and an arch-like layer of hot gas west of this Hii region. The same morphology is observed in the p-H2O 111-000 line, in absorption toward all submillimeter dust condensations. Optical depths of approximately 80 and 15 are estimated and correspond to column densities of 1015 and 2 × 1014 cm-2, respectively, for the hot core and IRDC position. These values indicate an abundance of water relative to H2 of 3 × 10-8 toward the hot core, while the abundance of water does not change along the IRDC with values close to some 10-8. Infall (over at least 20″) is detected toward the hot core position with a rate of 1-1.3 × 10-2M⊙ /yr, high enough to overcome the radiation pressure that is due to the stellar luminosity. The source structure of the hot core region appears complex, with a cold outer gas envelope in expansion, situated between the outflow and the observer, extending over 0.32 pc. The outflow is seen face-on and rather centered away from the hot core. Conclusions: The distribution of water along the IRDC is roughly constant with an abundance peak in the more evolved object, that is, in the hot core. These water abundances are in agreement with previous studies in other massive objects and chemical models. Herschel is an ESA space observatory with science instruments provided by European-led Principal Investigator consortia and with important participation from NASA.
Sedimentary Records of the Paleohurricane Activity in the Bahamas

NASA Astrophysics Data System (ADS)

Wallace, E. J.; Donnelly, J. P.; Wiman, C.; Cashman, M.

2015-12-01

Hurricanes pose a threat to human lives and can cause significant destruction of coastal areas. This threat has become more pronounced with recent rises in sea level and coastal populations. Currently, there is a large degree of uncertainty surrounding future changes in tropical cyclone activity. This is due to the limitations of climate models as well as the scarcity and unreliability of the current observational record. With so much uncertainty surrounding the current projections of hurricane activity, it is crucial to establish a longer and more accurate historical record. This study uses sediment cores extracted from blueholes in the Bahamas to develop a record of intense hurricane landfalls in the region dating back more than a millennia. The collected cores were sectioned, split, and scanned on an X-ray fluorescence scanner to obtain a high resolution core profile of the sediments' elemental composition and to identify potential sedimentary structures. Age control of the samples was determined using radiocarbon dating, coarse fraction was measured every centimeter, and hurricane event bed frequency was established for each core. We assess the statistical significance of the patterns observed in the sedimentary record using a coupled ocean-atmosphere hurricane model to simulate storms representative of modern climatology. Cores extracted from two blue holes near South Andros Island provide approximately a 1600 year and a 600 year record respectively, with sedimentation rates exceeding 1 cm/year. Both records contain coarse grained event deposits that correlate with known historical intense hurricane strikes in the Bahamas within age uncertainties. The 1600 year record confirms previous hurricane reconstructions from the Caribbean indicating higher tropical cyclone activity from 500 to 1400 CE. In addition, these new high-resolution records indicate elevated intense hurricane activity in the 17th and 18th centuries CE, when activity is also elevated in lower resolution records from Abaco, Bahamas and Vieques, Puerto Rico. However, records from the northeast United States and Gulf of Mexico are relatively inactive. This spatial variability in intense hurricane landfalls suggests significant regional controls on hurricane activity.
Smart Moves: Powering up the Brain with Physical Activity

ERIC Educational Resources Information Center

Conyers, Marcus; Wilson, Donna

2015-01-01

The Common Core State Standards emphasize higher-order thinking, problem solving, and the creation, retention, and application of knowledge. Achieving these standards creates greater cognitive demands on students. Recent research suggests that active play and regular exercise have a positive effect on brain regions associated with executive…
Bacterial responses to environmental change on the Tibetan Plateau over the past half century.

PubMed

Liu, Yongqin; Priscu, John C; Yao, Tandong; Vick-Majors, Trista J; Xu, Baiqing; Jiao, Nianzhi; Santibáñez, Pamela; Huang, Sijun; Wang, Ninglian; Greenwood, Mark; Michaud, Alexander B; Kang, Shichang; Wang, Jianjun; Gao, Qun; Yang, Yunfeng

2016-06-01

Climate change and anthropogenic factors can alter biodiversity and can lead to changes in community structure and function. Despite the potential impacts, no long-term records of climatic influences on microbial communities exist. The Tibetan Plateau is a highly sensitive region that is currently undergoing significant alteration resulting from both climate change and increased human activity. Ice cores from glaciers in this region serve as unique natural archives of bacterial abundance and community composition, and contain concomitant records of climate and environmental change. We report high-resolution profiles of bacterial density and community composition over the past half century in ice cores from three glaciers on the Tibetan Plateau. Statistical analysis showed that the bacterial community composition in the three ice cores converged starting in the 1990s. Changes in bacterial community composition were related to changing precipitation, increasing air temperature and anthropogenic activities in the vicinity of the plateau. Collectively, our ice core data on bacteria in concert with environmental and anthropogenic proxies indicate that the convergence of bacterial communities deposited on glaciers across a wide geographical area and situated in diverse habitat types was likely induced by climatic and anthropogenic drivers. © 2015 Society for Applied Microbiology and John Wiley & Sons Ltd.
A core functional region of the RFP1 promoter from Chinese wild grapevine is activated by powdery mildew pathogen and heat stress.

PubMed

Yu, Yihe; Xu, Weirong; Wang, Jie; Wang, Lei; Yao, Wenkong; Xu, Yan; Ding, Jiahua; Wang, Yuejin

2013-01-01

RING-finger proteins (RFP) function as ubiquitin ligases and play key roles in plant responses to biotic and abiotic stresses. However, little information is available on the regulation of RFP expression. Here, we isolate and characterize the RFP promoter sequence from the disease-resistant Chinese wild grape Vitis pseudoreticulata accession Baihe-35-1. Promoter-GUS fusion assays revealed that defense signaling molecules, powdery mildew infection, and heat stress induce VpRFP1 promoter activity. By contrast, the RFP1 promoter isolated from Vitis vinifera was only slightly induced by pathogen infection and heat treatment. By promoter deletion analysis, we found that the -148 bp region of the VpRFP1 promoter was the core functional promoter region. We also found that, in Arabidopsis, VpRFP1 expressed under its own promoter activated defense-related gene expression and improved disease resistance, but the same construct using the VvRFP1 promoter slightly improve disease resistance. Our results demonstrated that the -148 bp region of the VpRFP1 promoter plays a key role in response to pathogen and heat stress, and suggested that expression differences between VpRFP1 and VvRFP1 may be key for the differing disease resistance phenotypes of the two Vitis genotypes.
Age-dependent and -independent changes in attention-deficit/hyperactivity disorder (ADHD) during spatial working memory performance.

PubMed

Bollmann, Steffen; Ghisleni, Carmen; Poil, Simon-Shlomo; Martin, Ernst; Ball, Juliane; Eich-Höchli, Dominique; Klaver, Peter; O'Gorman, Ruth L; Michels, Lars; Brandeis, Daniel

2017-06-01

Attention-deficit/hyperactivity disorder (ADHD) has been associated with spatial working memory as well as frontostriatal core deficits. However, it is still unclear how the link between these frontostriatal deficits and working memory function in ADHD differs in children and adults. This study examined spatial working memory in adults and children with ADHD, focussing on identifying regions demonstrating age-invariant or age-dependent abnormalities. We used functional magnetic resonance imaging to examine a group of 26 children and 35 adults to study load manipulated spatial working memory in patients and controls. In comparison to healthy controls, patients demonstrated reduced positive parietal and frontostriatal load effects, i.e., less increase in brain activity from low to high load, despite similar task performance. In addition, younger patients showed negative load effects, i.e., a decrease in brain activity from low to high load, in medial prefrontal regions. Load effect differences between ADHD and controls that differed between age groups were found predominantly in prefrontal regions. Age-invariant load effect differences occurred predominantly in frontostriatal regions. The age-dependent deviations support the role of prefrontal maturation and compensation in ADHD, while the age-invariant alterations observed in frontostriatal regions provide further evidence that these regions reflect a core pathophysiology in ADHD.
A Role for the Left Angular Gyrus in Episodic Simulation and Memory.

PubMed

Thakral, Preston P; Madore, Kevin P; Schacter, Daniel L

2017-08-23

Functional magnetic resonance imaging (fMRI) studies indicate that episodic simulation (i.e., imagining specific future experiences) and episodic memory (i.e., remembering specific past experiences) are associated with enhanced activity in a common set of neural regions referred to as the core network. This network comprises the hippocampus, medial prefrontal cortex, and left angular gyrus, among other regions. Because fMRI data are correlational, it is unknown whether activity increases in core network regions are critical for episodic simulation and episodic memory. In the current study, we used MRI-guided transcranial magnetic stimulation (TMS) to assess whether temporary disruption of the left angular gyrus would impair both episodic simulation and memory (16 participants, 10 females). Relative to TMS to a control site (vertex), disruption of the left angular gyrus significantly reduced the number of internal (i.e., episodic) details produced during the simulation and memory tasks, with a concomitant increase in external detail production (i.e., semantic, repetitive, or off-topic information), reflected by a significant detail by TMS site interaction. Difficulty in the simulation and memory tasks also increased after TMS to the left angular gyrus relative to the vertex. In contrast, performance in a nonepisodic control task did not differ statistically as a function of TMS site (i.e., number of free associates produced or difficulty in performing the free associate task). Together, these results are the first to demonstrate that the left angular gyrus is critical for both episodic simulation and episodic memory. SIGNIFICANCE STATEMENT Humans have the ability to imagine future episodes (i.e., episodic simulation) and remember episodes from the past (i.e., episodic memory). A wealth of neuroimaging studies have revealed that these abilities are associated with enhanced activity in a core network of neural regions, including the hippocampus, medial prefrontal cortex, and left angular gyrus. However, neuroimaging data are correlational and do not tell us whether core regions support critical processes for simulation and memory. In the current study, we used transcranial magnetic stimulation and demonstrated that temporary disruption of the left angular gyrus leads to impairments in simulation and memory. The present study provides the first causal evidence to indicate that this region is critical for these fundamental abilities. Copyright © 2017 the authors 0270-6474/17/378142-08$15.00/0.
A Role for the Left Angular Gyrus in Episodic Simulation and Memory

PubMed Central

2017-01-01

Functional magnetic resonance imaging (fMRI) studies indicate that episodic simulation (i.e., imagining specific future experiences) and episodic memory (i.e., remembering specific past experiences) are associated with enhanced activity in a common set of neural regions referred to as the core network. This network comprises the hippocampus, medial prefrontal cortex, and left angular gyrus, among other regions. Because fMRI data are correlational, it is unknown whether activity increases in core network regions are critical for episodic simulation and episodic memory. In the current study, we used MRI-guided transcranial magnetic stimulation (TMS) to assess whether temporary disruption of the left angular gyrus would impair both episodic simulation and memory (16 participants, 10 females). Relative to TMS to a control site (vertex), disruption of the left angular gyrus significantly reduced the number of internal (i.e., episodic) details produced during the simulation and memory tasks, with a concomitant increase in external detail production (i.e., semantic, repetitive, or off-topic information), reflected by a significant detail by TMS site interaction. Difficulty in the simulation and memory tasks also increased after TMS to the left angular gyrus relative to the vertex. In contrast, performance in a nonepisodic control task did not differ statistically as a function of TMS site (i.e., number of free associates produced or difficulty in performing the free associate task). Together, these results are the first to demonstrate that the left angular gyrus is critical for both episodic simulation and episodic memory. SIGNIFICANCE STATEMENT Humans have the ability to imagine future episodes (i.e., episodic simulation) and remember episodes from the past (i.e., episodic memory). A wealth of neuroimaging studies have revealed that these abilities are associated with enhanced activity in a core network of neural regions, including the hippocampus, medial prefrontal cortex, and left angular gyrus. However, neuroimaging data are correlational and do not tell us whether core regions support critical processes for simulation and memory. In the current study, we used transcranial magnetic stimulation and demonstrated that temporary disruption of the left angular gyrus leads to impairments in simulation and memory. The present study provides the first causal evidence to indicate that this region is critical for these fundamental abilities. PMID:28733357
Lake and Bog Sediment Records of Holocene Climate and Glacier Variability in the Cordillera Vilcabamba of Southern Peru

NASA Astrophysics Data System (ADS)

Schweinsberg, A.; Licciardi, J. M.; Rodbell, D. T.; Stansell, N.

2013-12-01

Records of past fluctuations in climatically sensitive tropical glaciers are among the best indicators of regional paleoclimatic trends and forcings. However, continuous sediment records in this region remain limited, particularly during the Holocene. Here we present the first continuous records of glacier activity in the Cordillera Vilcabamba (13°20'S) of southern Peru from lake and bog sediment cores in stratigraphic contact with 10Be-dated moraines. Completed analyses include sediment lithostratigraphy, magnetic susceptibility, and biogenic silica, in conjunction with AMS radiocarbon dates on charcoal. Carbon measurements, bulk density, and bulk sedimentation rates are used to derive a record of clastic sediment flux that serves as a proxy indicator of former glacier activity. Visually distinct sedimentological variations, magnetic susceptibility peaks, and radiocarbon dates were correlated among adjacent cores to construct one composite record representative of each coring site. Three composite cores are presented: two from the Rio Blanco valley and one from the Yanama valley. Sediment records from these two glaciated valleys suggest a series of environmental changes during the last ~12,000 calendar years BP. Clastic sediment flux trends are broadly consistent with published evidence that the early to middle Holocene was relatively warm and arid in the southern Peruvian Andes. An episode of high clastic flux in the late Holocene may reflect enhanced glacial activity in response to the onset of cooler and wetter conditions. A prominent peak in magnetic susceptibility at 1660 cal yr BP is present in all composite cores and serves as a chronostratigraphic marker. In addition, our new basal radiocarbon ages place limits on the cosmogenic 10Be production rate in the high Andes, suggesting the cosmogenic 10Be production rate is considerably lower than previously published estimates.
A 60-year record of 129I in Taal Lake sediments (Philippines): Influence of human nuclear activities at low latitude regions.

PubMed

Zhang, Luyuan; Hou, Xiaolin; Li, Hong-Chun; Xu, Xiaomei

2018-02-01

The influence of human nuclear activities on environmental radioactivity is not well known at low latitude regions that are distant from nuclear test sites and nuclear facilities. A sediment core collected from Taal Lake in the central Philippines was analyzed for 129 I and 127 I to investigate this influence in a low-latitude terrestrial system. A baseline of 129 I/ 127 I atomic ratios was established at (2.04-5.14) × 10 -12 in the pre-nuclear era in this region. Controlled by the northeasterly equatorial trade winds, increased 129 I/ 127 I ratios of (20.1-69.3) × 10 -12 suggest that atmospheric nuclear weapons tests at the Pacific Proving Grounds in the central Pacific Ocean was the major source of 129 I in the sediment during 1956-1962. The 129 I/ 127 I ratios, up to 157.5 × 10 -12 after 1964, indicate a strong influence by European nuclear fuel reprocessing plants. The East Asian Winter Monsoon is found to be the dominant driving force in the atmospheric dispersion of radioactive iodine ( 129 I) from the European nuclear fuel reprocessing plants to Southeast Asia, which is also important for dispersion of other airborne pollutants from the middle-high to low latitude regions. A significant 129 I/ 127 I peak at 42.8 cm in the Taal Lake core appears to be the signal of the Chernobyl accident in 1986. In addition, volcanic activities are reflected in the iodine isotope profiles in the sediment core, suggesting the potential of using iodine isotopes as an indicator of volcanic eruptions. Copyright © 2017 Elsevier Ltd. All rights reserved.
Pervasive faint Fe XIX emission from a solar active region observed with EUNIS-13: Evidence for nanoflare heating

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brosius, Jeffrey W.; Daw, Adrian N.; Rabin, D. M., E-mail: Jeffrey.W.Brosius@nasa.gov

2014-08-01

We present spatially resolved EUV spectroscopic measurements of pervasive, faint Fe XIX 592.2 Å line emission in an active region observed during the 2013 April 23 flight of the Extreme Ultraviolet Normal Incidence Spectrograph (EUNIS-13) sounding rocket instrument. With cooled detectors, high sensitivity, and high spectral resolution, EUNIS-13 resolves the lines of Fe XIX at 592.2 Å (formed at temperature T ≈ 8.9 MK) and Fe XII at 592.6 Å (T ≈ 1.6 MK). The Fe XIX line emission, observed over an area in excess of 4920 arcsec{sup 2} (2.58 × 10{sup 9} km{sup 2}, more than 60% of themore » active region), provides strong evidence for the nanoflare heating model of the solar corona. No GOES events occurred in the region less than 2 hr before the rocket flight, but a microflare was observed north and east of the region with RHESSI and EUNIS during the flight. The absence of significant upward velocities anywhere in the region, particularly the microflare, indicates that the pervasive Fe XIX emission is not propelled outward from the microflare site, but is most likely attributed to localized heating (not necessarily due to reconnection) consistent with the nanoflare heating model of the solar corona. Assuming ionization equilibrium we estimate Fe XIX/Fe XII emission measure ratios of ∼0.076 just outside the AR core and ∼0.59 in the core.« less
Strontium Isotope Dating of Metalliferous Sediment in the SW Pacific Basin

NASA Astrophysics Data System (ADS)

Stancin, A. M.; Gleason, J. D.; Owen, B. M.; Rea, D. K.; Moore, T. C.; Hendy, I. L.; Lyle, M. W.; Blum, J. D.

2007-12-01

A 2 million km2 region virtually devoid of sediment was identified in the remote SW Pacific Basin during the TUIM- 3 2005 drill site survey cruise. This region, termed the "South Pacific Bare Zone", comprises ocean floor dating back to the Late Cretaceous. Within the Bare Zone, a small (1km2) abyssal valley containing sediment to a depth of 24 m was sampled using a large diameter piston core (MV0502-15JC, 31 ° 42.194'S, 143 ° 30.331'W), leading to recovery of 8.35 m of metalliferous sediment at 5082 m water depth. Fish-teeth Sr-isotope stratigraphy reveals a continuous record of sedimentation from 31 Ma to present at this site. The fish teeth age-depth profile and INAA geochemistry reveal an exponentially decreasing hydrothermal flux, with sedimentation rates approaching 0.05 mm/kyr after 20 Ma. The source of hydrothermal activity at this site was likely the Pacific- Farallon Ridge, which went extinct at 20 Ma. A second piston core (MV0502-16JC; 28 ° 05.151'S, 140 ° 14.140'W) was collected near MacDonald Seamounts located on the southeastern end of the Cook-Austral island chain outside the Bare Zone and recovered 10.5 m of hydrothermal sediment and biogenic ooze. The lower 65 cm of the core consists of a coccolith ooze. From 10 mbsf depth to 1.5 mbsf depth, the core contians reddish black zeolitic clay, while the upper 1.5 mbsf contains biogenic ooze associated with abundant Late Pleistocene foraminifera remains. Concordant nannofossil and fish teeth ages at the base of the core (27-28 Ma), and Pleistocene ages near the top of the core reinforce the validity of the Sr fish teeth method for dating hydrothermal cores. These independent records suggest that regional hydrothermal activity during the Oligocene may have been related to a series of late Eocene/early Oligocene ridge jumps, propagating rifts and seafloor spreading centers that accompanied large-scale plate tectonic reorganization of South Pacific seafloor.
n-Alkanes in sediments from the Yellow River Estuary, China: Occurrence, sources and historical sedimentary record.

PubMed

Wang, Shanshan; Liu, Guijian; Yuan, Zijiao; Da, Chunnian

2018-04-15

A total of 21 surface sediments from the Yellow River Estuary (YRE) and a sediment core from the abandoned Old Yellow River Estuary (OYRE) were analyzed for n-alkanes using gas chromatography-mass spectrometry (GC-MS). n-Alkanes in the range C 12 -C 33 and C 13 -C 34 were identified in the surface sediments and the core, respectively. The homologous series were mainly bimodal distribution pattern without odd/even predominance in the YRE and OYRE. The total n-alkanes concentrations in the surface sediments ranged from 0.356 to 0.572mg/kg, with a mean of 0.434mg/kg on dry wt. Evaluation of n-alkanes proxies indicated that the aliphatic hydrocarbons in the surface sediments were derived mainly from a petrogenic source with a relatively low contribution of submerged/floating macrophytes, terrestrial and emergent plants. The dated core covered the time period 1925-2012 and the mean sedimentation rate was ca. 0.5cm/yr. The total n-alkanes concentrations in the core ranged from 0.0394 to 0.941mg/kg, with a mean of 0.180mg/kg. The temporal evolution of n-alkanes reflected the historical input of aliphatic hydrocarbons and was consistent with local and regional anthropogenic activity. In general, the investigation on the sediment core revealed a trend of regional environmental change and the role of anthropogenic activity in environmental change. Copyright © 2017 Elsevier Inc. All rights reserved.

Cool Science Explains a Warming World: Using Ice Core Science to Bridge the Gap Between Researchers and the K-12 Classroom

NASA Astrophysics Data System (ADS)

Huffman, L. T.

2017-12-01

Changing ice has urgent implications for people around the world. The Ice Drilling Program Office (IDPO) provides scientific leadership and oversight of ice coring and drilling activities funded by the US National Science Foundation and also has goals to enhance education and communication of current research information. In a time when misinformation is rampant and climate change science is suspect, it is essential that students receive accurate scientific information and engage in learning activities that model complex ideas through engaging and age appropriate ways, while also learning to validate and recognize reliable sources. The IDPO Education and Outreach (EO) office works to create resources, activities and professional development that bridge the gap between ice core science research and educators and their students. Ice core science is on the cutting edge of new discoveries about climate change and understanding better the past to predict the future. Hands-on inquiry activities based on ice core data allow teachers to lead their students to new discoveries about climate secrets hidden deep in the ice. Capitalizing on the inherent interest in the extremes of the Polar Regions, IDPO materials engage students in activities aligned with NGSS standards. Ice drilling technologies make an ideal platform for intertwining engineering concepts and practices with science research to meet the SEP (Science and Engineering Practices) in the NGSS. This session will highlight how the IDPO EO office has built a community of ice core scientists willing to take part in education and outreach projects and events and share some of the resources available to K-12 educators. We will highlight some of the successes and lessons learned as we continually evolve our work toward more effective science education and communication highlighting ice core and climate change science.
EIT Crinkles as Evidence for the Breakout Model of Solar Eruptions

NASA Technical Reports Server (NTRS)

Sterling, Alphonse C.; Moore, R. L.; Whitaker, Ann F. (Technical Monitor)

2001-01-01

We present observations of two homologous flares in NOAA active region 8210 occurring on 1998 May 1 and May 2, using EUV data from the Extreme Ultraviolet Radiation Imaging Telescope (EIT) on the Solar and Heliospheric Observatory (SOHO), high-resolution and high-time cadence images from the soft X-ray telescope (SXT) on Yohkoh, images or fluxes from the hard X-ray telescope (HXT) on Yohkoh and the BATSE experiment on the Compton Gamma Ray Observatory (CGRO), and Ca xix soft X-ray spectra from the Bragg crystal spectrometer (BCS) on Yohkoh. Magnetograms indicate that the flares occurred in a complex magnetic topology, consisting of an emerging flux region (EFR) sandwiched between a sunspot to the west and a coronal hole to the east. In an earlier study we found that in EIT images, both flaring episodes showed the formation of a crinkle-like pattern of emission ("EIT crinkles") occurring in the coronal hole vicinity, well away from a central "core field" area near the EFR-sunspot boundary. With our expanded data set, here we find that most of the energetic activity occurs in the core region in both events, with some portions of the core brightening shortly after the onset of the EIT crinkles, and other regions of the core brightening several minutes later, coincident with a burst of hard X-rays: there are no obvious core brightenings prior to the onset of the EIT crinkles. These timings are consistent with the "breakout model" of solar eruptions, whereby the emerging flux is initially constrained by a system of overlying magnetic field lines, and is able to erupt only after an opening develops in the overlying fields as a consequence of magnetic reconnection at a magnetic null point. In our case, the EIT crinkles would be a signature of this pre-impulsive-phase magnetic reconnection, and brightening of the core only occurs after the core fields begin to escape through the newly-created opening in the overlying fields. Morphology in soft X-ray images and properties in hard X-rays differ between the two events, with complexities that preclude a simple determination of the dynamics in the core at the times of eruption. From the BCS spectra, we find that the core region expends energy at a rate of approx. 10(exp 26) erg per second during the time of the growth of the EIT crinkles; this rate is an upper limit to energy expended in the reconnections opening the overlying fields. Energy losses occur at an order-of-magnitude higher rate near the time of the peak of the events. There is little evidence of asymmetry in the spectra, consistent with the majority of the mass flows occurring normal to the line-of-sight. Both events have similar electron temperature dependencies on time.
Polyclonal antibody against a complement-activating pectin from the roots of Angelica acutiloba.

PubMed

Wang, N L; Kiyohara, H; Matsumoto, T; Otsuka, H; Hirano, M; Yamada, H

1994-10-01

Anti-sera against a complement-activating pectin (AR-2IIb), which was purified from the roots of Angelica acutiloba Kitagawa, were obtained by immunization of rabbits, and a polyclonal anti-AR-2IIb antibody of the IgG class was purified by affinity chromatography on AR-2IIb-immobilized Sepharose and Protein G-Sepharose. Periodate oxidation of AR-2IIb significantly reduced its inhibitory activity on the reactivity of AR-2IIb to anti-AR-2IIb-IgG, but pronase digestion of AR-2IIb did not affect its inhibitory activity. Other pharmacologically active pectins from A. autiloba, Bupleurum falcatum, and Glycyrrhiza uralensis and the complement-activating pectic arabinogalactan from A. autiloba also showed significant inhibitory activities on the reactivity of AR-2IIb to anti-AR-2IIb-IgG, but these inhibitory activities were lower than that of AR-2IIb. Other pectins, polygalacturonic acid, arabinogalactan, galactan, and araban tested had negligible inhibitory activity. Endo-a-(1-->4)-polygalacturonase digestion of AR-2IIb indicated that its "ramified" region (rhamnogalacturonan core possessing neutral oligosaccharide side-chains) contained epitopes for anti-AR-2IIb-IgG, but that 2-keto-3-deoxyoctulosonic acid (KDO)-containing regions and oligogalacturonides obtained from AR-2IIb were not recognized by anti-AR-2IIb-IgG. Although carboxyl-reduction of galacturonic acid in the "ramified" region decreased the inhibitory activity of the "ramified" on its reactivity to anti-AR-2IIb, an acidic tetrasaccharide unit in the rhamnogalacturonan core had negligible inhibitory activity.
Tenebrio molitor antifreeze protein gene identification and regulation.

PubMed

Qin, Wensheng; Walker, Virginia K

2006-02-15

The yellow mealworm, Tenebrio molitor, is a freeze susceptible, stored product pest. Its winter survival is facilitated by the accumulation of antifreeze proteins (AFPs), encoded by a small gene family. We have now isolated 11 different AFP genomic clones from 3 genomic libraries. All the clones had a single coding sequence, with no evidence of intervening sequences. Three genomic clones were further characterized. All have putative TATA box sequences upstream of the coding regions and multiple potential poly(A) signal sequences downstream of the coding regions. A TmAFP regulatory region, B1037, conferred transcriptional activity when ligated to a luciferase reporter sequence and after transfection into an insect cell line. A 143 bp core promoter including a TATA box sequence was identified. Its promoter activity was increased 4.4 times by inserting an exotic 245 bp intron into the construct, similar to the enhancement of transgenic expression seen in several other systems. The addition of a duplication of the first 120 bp sequence from the 143 bp core promoter decreased promoter activity by half. Although putative hormonal response sequences were identified, none of the five hormones tested enhanced reporter activity. These studies on the mechanisms of AFP transcriptional control are important for the consideration of any transfer of freeze-resistance phenotypes to beneficial hosts.
Inner Core Tomography Under Africa

NASA Astrophysics Data System (ADS)

Irving, J. C. E.

2014-12-01

Hemispherical structure in the inner core has been observed using both normal mode and body wave data, but the more regional scale properties of the inner core are still the subject of ongoing debate. The nature of the vertical boundary regions between the eastern and western hemispheres will be an important constraint on dynamical processes at work in the inner core. With limited data available, earlier inner core studies defined each boundary using one line of longitude, but this may not be a sufficient description for what could be one of the inner core's most heterogeneous regions. Here, I present a large, hand-picked dataset of PKPbc-PKPdf differential travel times which sample the inner core under Africa, where the proposed position of one hemisphere boundary is located. The dataset contains polar, intermediate and equatorial rays through the inner core, and the presence of crossing raypaths makes regional-scale tomography of the inner core feasible. I invert the data to find regional variations in inner core anisotropy under different parts of Africa, and present both anisotropy and voigt isotropic velocity variations of this important portion of the inner core.
Development of Tool Representations in the Dorsal and Ventral Visual Object Processing Pathways

PubMed Central

Kersey, Alyssa J.; Clark, Tyia S.; Lussier, Courtney A.; Mahon, Bradford Z.; Cantlon, Jessica F.

2016-01-01

Tools represent a special class of objects, because they are processed across both the dorsal and ventral visual object processing pathways. Three core regions are known to be involved in tool processing: the left posterior middle temporal gyrus, the medial fusiform gyrus (bilaterally), and the left inferior parietal lobule. A critical and relatively unexplored issue concerns whether, in development, tool preferences emerge at the same time and to a similar degree across all regions of the tool-processing network. To test this issue, we used functional magnetic resonance imaging to measure the neural amplitude, peak location, and the dispersion of tool-related neural responses in the youngest sample of children tested to date in this domain (ages 4–8 years). We show that children recruit overlapping regions of the adult tool-processing network and also exhibit similar patterns of co-activation across the network to adults. The amplitude and co-activation data show that the core components of the tool-processing network are established by age 4. Our findings on the distributions of peak location and dispersion of activation indicate that the tool network undergoes refinement between ages 4 and 8 years. PMID:26108614
10Be in ice at high resolution: Solar activity and climate signals observed and GCM-modeled in Law Dome ice cores

NASA Astrophysics Data System (ADS)

Pedro, Joel; Heikkilä, Ulla; van Ommen, T. D.; Smith, A. M.

2010-05-01

Changes in solar activity modulate the galactic cosmic ray flux, and in turn, the production rate of 10Be in the earth's atmosphere. The best archives of past changes in 10Be production rate are the polar ice cores. Key challenges in interpreting these archives as proxies for past solar activity lie in separating the useful solar activity (or production) signal from the interfering meteorological (or climate) signal, and furthermore, in determining the atmospheric source regions of 10Be deposited to the ice core site. In this study we use a new monthly resolution composite 10Be record, which spans the past decade, and a general circulation model (ECHAM5-HAM), to constrain both the production and climate signals in 10Be concentrations at the Law Dome ice core site, East Antarctica. This study differs from most previous work on 10Be in Antarctica due to the very high sample resolution achieved. This high resolution, through a time period where accurate instrumental measurements of solar activity and climate are available, allows us to examine the response of 10Be concentrations in ice to short-term (monthly to annual) variations in solar activity, and to short-term variations in climate, including seasonality. We find a significant correlation (r2 = 0.56, P < 0.005, n = 92) between observed 10Be concentrations and solar activity (represented by the neutron counting rate). The most pervasive climate influence is a seasonal cycle, which shows maximum concentrations in mid-to-late-summer and minimum concentrations in winter. Model results show reasonable agreement with observations; both a solar activity signal and seasonal cycle in 10Be are captured. However, the modeled snow accumulation rate is too high by approximately 60%. According to the model, the main atmospheric source region of 10Be deposited to Law Dome is the 30-90°S stratosphere (~50%), followed by the 30-90°S troposphere (~30%). An enhancement in the fraction of 10Be arriving to Law Dome from the stratosphere is found by the model during the mid-to-late summer, we suggest this pattern is implicated in the seasonality of observed 10Be concentrations in ice. Our results have implications for interpretation of longer term records of 10Be from ice cores. Firstly, the strong production signal supports the use of 10Be as a solar proxy. Secondly, the short term climate processes operating here, may provide clues to how longer term shifts in climate impact on ice core 10Be.
High star formation activity in the central region of a distant cluster at z = 1.46

NASA Astrophysics Data System (ADS)

Hayashi, Masao; Kodama, Tadayuki; Koyama, Yusei; Tanaka, Ichi; Shimasaku, Kazuhiro; Okamura, Sadanori

2010-03-01

We present an unbiased deep [OII] emission survey of a cluster XMMXCS J2215.9-1738 at z = 1.46, the most distant cluster to date with a detection of extended X-ray emission. With wide-field optical and near-infrared cameras (Suprime-Cam and MOIRCS, respectively) on Subaru telescope, we performed deep imaging with a narrow-band filter NB912 (λc = 9139 Å, Δλ = 134 Å) as well as broad-band filters (B,z',J and Ks). From the photometric catalogues, we have identified 44 [OII] emitters in the cluster central region of 6 × 6 arcmin2 down to a dust-free star formation rate (SFR) of 2.6Msolaryr-1 (3σ). Interestingly, it is found that there are many [OII] emitters even in the central high-density region. In fact, the fraction of [OII] emitters to the cluster members as well as their SFRs and equivalent widths stay almost constant with decreasing cluster-centric distance up to the cluster core. Unlike clusters at lower redshifts (z <~ 1) where star formation activity is mostly quenched in their central regions, this higher redshift XMMXCS J2215.9-1738 cluster shows its high star formation activity even at its centre, suggesting that we are beginning to enter the formation epoch of some galaxies in the cluster core eventually. Moreover, we find a deficit of galaxies on the red sequence at magnitudes fainter than ~M* + 0.5 on the colour-magnitude diagram. This break magnitude is brighter than that of lower redshift clusters, and it is likely that we are seeing the formation phase of more massive red galaxies in the cluster core at z ~ 1. These results may indicate inside-out and down-sizing propagation of star formation activity in the course of cluster evolution.
Experimental and computational studies on the femoral fracture risk for advanced core decompression.

PubMed

Tran, T N; Warwas, S; Haversath, M; Classen, T; Hohn, H P; Jäger, M; Kowalczyk, W; Landgraeber, S

2014-04-01

Two questions are often addressed by orthopedists relating to core decompression procedure: 1) Is the core decompression procedure associated with a considerable lack of structural support of the bone? and 2) Is there an optimal region for the surgical entrance point for which the fracture risk would be lowest? As bioresorbable bone substitutes become more and more common and core decompression has been described in combination with them, the current study takes this into account. Finite element model of a femur treated by core decompression with bone substitute was simulated and analyzed. In-vitro compression testing of femora was used to confirm finite element results. The results showed that for core decompression with standard drilling in combination with artificial bone substitute refilling, daily activities (normal walking and walking downstairs) are not risky for femoral fracture. The femoral fracture risk increased successively when the entrance point is located further distal. The critical value of the deviation of the entrance point to a more distal part is about 20mm. The study findings demonstrate that optimal entrance point should locate on the proximal subtrochanteric region in order to reduce the subtrochanteric fracture risk. Furthermore the consistent results of finite element and in-vitro testing imply that the simulations are sufficient. Copyright © 2014 Elsevier Ltd. All rights reserved.
Soft magnetic characteristics of laminated magnetic block cores assembled with a high Bs nanocrystalline alloy

NASA Astrophysics Data System (ADS)

Yao, Atsushi; Inoue, Masaki; Tsukada, Kouhei; Fujisaki, Keisuke

2018-05-01

This paper focuses on an evaluation of core losses in laminated magnetic block cores assembled with a high Bs nanocrystalline alloy in high magnetic flux density region. To discuss the soft magnetic properties of the high Bs block cores, the comparison with amorphous (SA1) block cores is also performed. In the high Bs block core, both low core losses and high saturation flux densities Bs are satisfied in the low frequency region. Furthermore, in the laminated block core made of the high Bs alloy, the rate of increase of iron losses as a function of the magnetic flux density remains small up to around 1.6 T, which cannot be realized in conventional laminated block cores based on amorphous alloy. The block core made of the high Bs alloy exhibits comparable core loss with that of amorphous alloy core in the high-frequency region. Thus, it is expected that this laminated high Bs block core can achieve low core losses and high saturation flux densities in the high-frequency region.
Neural evidence that human emotions share core affective properties.

PubMed

Wilson-Mendenhall, Christine D; Barrett, Lisa Feldman; Barsalou, Lawrence W

2013-06-01

Research on the "emotional brain" remains centered around the idea that emotions like fear, happiness, and sadness result from specialized and distinct neural circuitry. Accumulating behavioral and physiological evidence suggests, instead, that emotions are grounded in core affect--a person's fluctuating level of pleasant or unpleasant arousal. A neuroimaging study revealed that participants' subjective ratings of valence (i.e., pleasure/displeasure) and of arousal evoked by various fear, happiness, and sadness experiences correlated with neural activity in specific brain regions (orbitofrontal cortex and amygdala, respectively). We observed these correlations across diverse instances within each emotion category, as well as across instances from all three categories. Consistent with a psychological construction approach to emotion, the results suggest that neural circuitry realizes more basic processes across discrete emotions. The implicated brain regions regulate the body to deal with the world, producing the affective changes at the core of emotions and many other psychological phenomena.
Neural Evidence that Human Emotions Share Core Affective Properties

PubMed Central

Wilson-Mendenhall, Christine D.; Barrett, Lisa Feldman; Barsalou, Lawrence W.

2014-01-01

Research on the “emotional brain” remains centered around the idea that emotions like fear, happiness, and sadness result from specialized and distinct neural circuitry. Accumulating behavioral and physiological evidence suggests, instead, that emotions are grounded in core affect – a person's fluctuating level of pleasant or unpleasant arousal. A neuroimaging study revealed that participants' subjective ratings of valence (i.e., pleasure/displeasure) and of arousal evoked by various fear, happiness, and sadness experiences correlated with neural activity in specific brain regions (orbitofrontal cortex and amygdala, respectively). We observed these correlations across diverse instances within each emotion category, as well as across instances from all three categories. Consistent with a psychological construction approach to emotion, the results suggest that neural circuitry realizes more basic processes across discrete emotions. The implicated brain regions regulate the body to deal with the world, producing the affective changes at the core of emotions and many other psychological phenomena. PMID:23603916
Decreased Photosystem II Core Phosphorylation in a Yellow-Green Mutant of Wheat Showing Monophasic Fluorescence Induction Curve.

PubMed Central

Giardi, M. T.; Kucera, T.; Briantais, J. M.; Hodges, M.

1995-01-01

In the present work we study the regulation of the distribution of the phosphorylated photosystem II (PSII) core populations present in grana regions of the thylakoids from several plant species. The heterogeneous nature of PSII core phosphorylation has previously been reported (M.T. Giardi, F. Rigoni, R. Barbato [1992] Plant Physiol 100: 1948-1954; M.T. Giardi [1993] Planta 190: 107-113). The pattern of four phosphorylated PSII core populations in the grana regions appears to be ubiquitous in higher plants. In the dark, at least two phosphorylated PSII core populations are always detected. A mutant of wheat (Triticum durum) that shows monophasic room-temperature photoreduction of the primary quinone electron acceptor of PSII as measured by chlorophyll fluorescence increase in the presence and absence of 3-(3,4-dichlorophenyl)-1,1-dimethylurea and by fluorescence upon flash illumination in intact leaves also lacks the usual distribution of phosphorylated PSII core populations. In this mutant, the whole PSII core population pattern is changed, probably due to altered threonine kinase activity, which leads to the absence of light-induced phosphorylation of CP43 and D2 proteins. The results, correlated to previous experiments in vivo, support the idea that the functional heterogeneity observed by fluorescence is correlated in part to the PSII protein phosphorylation in the grana. PMID:12228652
Earthquake Signatures in the Modern Sediment Record of Prince William Sound, Alaska

NASA Astrophysics Data System (ADS)

Marshall, N. R.; Kuehl, S. A.; Dellapenna, T. M.; Miller, E. J.

2016-02-01

Geochemical signatures of earthquake-generated sediment gravity flows are investigated using X-ray fluorescence core scanning on a suite of sediment cores from Prince William Sound, Alaska. This study focused on the development of geochemical proxies for earthquake deposits with an emphasis on interpreting deposits initiated from large subduction earthquakes. A north-south transect of sediment cores from Prince William Sound, between Hinchinbrook Island and the Columbia Glacier, was used to examine a record of earthquakes in this tectonically active region for the past century. The sediments in Prince William Sound are sourced from two geologically distinct regions: the metamorphosed turbidites of coastal Prince William Sound, and the Copper River Basin that contains a significant amount of volcanic rocks. Geochemical studies of sediment cores and end-member sediment samples using X-ray fluorescence and inductively coupled plasma mass spectrometry allowed for the development of geochemical proxies for sediment provenance during the past 100 years. Downcore peaks in Sr/Pb are indicative of Copper River Basin sediments, whereas peaks in K/Ca are indicative of inputs of Prince William Sound sediments. Large subduction earthquakes in northern Prince William Sound initiate gravity flows of Prince William Sound provenance into the deep channel. Particularly robust provenance signatures are seen in the northernmost cores in the core transect, which are closer to the earthquake epicenters and the Columbia Glacier source region. The ages of the deposits, from core-averaged 210Pb sediment accumulation rates, correspond to large earthquakes that occurred in 1912, 1964, and 1983. A similar deposit from 1895 in northern Prince William Sound, prior to historical earthquake records, may have also been initiated from a large earthquake in the 1890's.
Widespread active detachment faulting and core complex formation near 13 degrees N on the Mid-Atlantic Ridge.

PubMed

Smith, Deborah K; Cann, Johnson R; Escartín, Javier

2006-07-27

Oceanic core complexes are massifs in which lower-crustal and upper-mantle rocks are exposed at the sea floor. They form at mid-ocean ridges through slip on detachment faults rooted below the spreading axis. To date, most studies of core complexes have been based on isolated inactive massifs that have spread away from ridge axes. Here we present a survey of the Mid-Atlantic Ridge near 13 degrees N containing a segment in which a number of linked detachment faults extend for 75 km along one flank of the spreading axis. The detachment faults are apparently all currently active and at various stages of development. A field of extinct core complexes extends away from the axis for at least 100 km. Our observations reveal the topographic characteristics of actively forming core complexes and their evolution from initiation within the axial valley floor to maturity and eventual inactivity. Within the surrounding region there is a strong correlation between detachment fault morphology at the ridge axis and high rates of hydroacoustically recorded earthquake seismicity. Preliminary examination of seismicity and seafloor morphology farther north along the Mid-Atlantic Ridge suggests that active detachment faulting is occurring in many segments and that detachment faulting is more important in the generation of ocean crust at this slow-spreading ridge than previously suspected.
Turbine component casting core with high resolution region

DOEpatents

Kamel, Ahmed; Merrill, Gary B.

2014-08-26

A hollow turbine engine component with complex internal features can include a first region and a second, high resolution region. The first region can be defined by a first ceramic core piece formed by any conventional process, such as by injection molding or transfer molding. The second region can be defined by a second ceramic core piece formed separately by a method effective to produce high resolution features, such as tomo lithographic molding. The first core piece and the second core piece can be joined by interlocking engagement that once subjected to an intermediate thermal heat treatment process thermally deform to form a three dimensional interlocking joint between the first and second core pieces by allowing thermal creep to irreversibly interlock the first and second core pieces together such that the joint becomes physically locked together providing joint stability through thermal processing.
RNA chaperoning and intrinsic disorder in the core proteins of Flaviviridae.

PubMed

Ivanyi-Nagy, Roland; Lavergne, Jean-Pierre; Gabus, Caroline; Ficheux, Damien; Darlix, Jean-Luc

2008-02-01

RNA chaperone proteins are essential partners of RNA in living organisms and viruses. They are thought to assist in the correct folding and structural rearrangements of RNA molecules by resolving misfolded RNA species in an ATP-independent manner. RNA chaperoning is probably an entropy-driven process, mediated by the coupled binding and folding of intrinsically disordered protein regions and the kinetically trapped RNA. Previously, we have shown that the core protein of hepatitis C virus (HCV) is a potent RNA chaperone that can drive profound structural modifications of HCV RNA in vitro. We now examined the RNA chaperone activity and the disordered nature of core proteins from different Flaviviridae genera, namely that of HCV, GBV-B (GB virus B), WNV (West Nile virus) and BVDV (bovine viral diarrhoea virus). Despite low-sequence similarities, all four proteins demonstrated general nucleic acid annealing and RNA chaperone activities. Furthermore, heat resistance of core proteins, as well as far-UV circular dichroism spectroscopy suggested that a well-defined 3D protein structure is not necessary for core-induced RNA structural rearrangements. These data provide evidence that RNA chaperoning-possibly mediated by intrinsically disordered protein segments-is conserved in Flaviviridae core proteins. Thus, besides nucleocapsid formation, core proteins may function in RNA structural rearrangements taking place during virus replication.
RNA chaperoning and intrinsic disorder in the core proteins of Flaviviridae

PubMed Central

Ivanyi-Nagy, Roland; Lavergne, Jean-Pierre; Gabus, Caroline; Ficheux, Damien; Darlix, Jean-Luc

2008-01-01

RNA chaperone proteins are essential partners of RNA in living organisms and viruses. They are thought to assist in the correct folding and structural rearrangements of RNA molecules by resolving misfolded RNA species in an ATP-independent manner. RNA chaperoning is probably an entropy-driven process, mediated by the coupled binding and folding of intrinsically disordered protein regions and the kinetically trapped RNA. Previously, we have shown that the core protein of hepatitis C virus (HCV) is a potent RNA chaperone that can drive profound structural modifications of HCV RNA in vitro. We now examined the RNA chaperone activity and the disordered nature of core proteins from different Flaviviridae genera, namely that of HCV, GBV-B (GB virus B), WNV (West Nile virus) and BVDV (bovine viral diarrhoea virus). Despite low-sequence similarities, all four proteins demonstrated general nucleic acid annealing and RNA chaperone activities. Furthermore, heat resistance of core proteins, as well as far-UV circular dichroism spectroscopy suggested that a well-defined 3D protein structure is not necessary for core-induced RNA structural rearrangements. These data provide evidence that RNA chaperoning—possibly mediated by intrinsically disordered protein segments—is conserved in Flaviviridae core proteins. Thus, besides nucleocapsid formation, core proteins may function in RNA structural rearrangements taking place during virus replication. PMID:18033802
Upper Mantle Dynamics of Bangladesh by Splitting Analyzes of Core Refracted SKS and SKKS Waves

NASA Astrophysics Data System (ADS)

Tiwari, A. K.; Bhushan, K.; Eken, T.; Singh, A.

2017-12-01

New shear wave splitting measurements are obtained from hitherto less studied Bengal Basin using core refracted SKS and SKKS phases. Splitting parameters, time delays (δt) and fast polarization directions (Φ) were estimated through analysis of 64 high-quality waveforms (≥ 2.5 signal to noise ratio) from 29 earthquakes with magnitude ≥5.5 recorded at eight seismic stations deployed over Bangladesh. We found no evidence of splitting which indicates azimuthal isotropy beneath the region. Null measurements can be explained by near vertical axis of anisotropy or by the presence of multiple anisotropic layers with different fast polarization directions, where combined effect results in null. We consider that the presence of partial melts within the upper mantle due to Kerguelen mantle plume activities may be the potential geodynamic cause for observed null measurements. It locally perturbed mantle convection flow beneath the region and reoriented the lattice preferred orientation of the upper mantle mineral mainly olivine as this disabled the core refracted SKS and SKKS phases to scan the anisotropic characteristics of the region, and hence null measurements are obtained.
Young, metal-enriched cores in early-type dwarf galaxies in the Virgo cluster based on colour gradients

NASA Astrophysics Data System (ADS)

Urich, Linda; Lisker, Thorsten; Janz, Joachim; van de Ven, Glenn; Leaman, Ryan; Boselli, Alessandro; Paudel, Sanjaya; Sybilska, Agnieszka; Peletier, Reynier F.; den Brok, Mark; Hensler, Gerhard; Toloba, Elisa; Falcón-Barroso, Jesús; Niemi, Sami-Matias

2017-10-01

Early-type dwarf galaxies are not simply featureless, old objects, but were found to be much more diverse, hosting substructures and a variety of stellar population properties. To explore the stellar content of faint early-type galaxies, and to investigate in particular those with recent central star formation, we study colours and colour gradients within one effective radius in optical (g - r) and near-infrared (I - H) bands for 120 Virgo cluster early-type galaxies with - 19 mag

Self-affirmation activates brain systems associated with self-related processing and reward and is reinforced by future orientation

PubMed Central

O’Donnell, Matthew Brook; Tinney, Francis J.; Lieberman, Matthew D.; Taylor, Shelley E.; Strecher, Victor J.; Falk, Emily B.

2016-01-01

Self-affirmation theory posits that people are motivated to maintain a positive self-view and that threats to perceived self-competence are met with resistance. When threatened, self-affirmations can restore self-competence by allowing individuals to reflect on sources of self-worth, such as core values. Many questions exist, however, about the underlying mechanisms associated with self-affirmation. We examined the neural mechanisms of self-affirmation with a task developed for use in a functional magnetic resonance imaging environment. Results of a region of interest analysis demonstrated that participants who were affirmed (compared with unaffirmed participants) showed increased activity in key regions of the brain’s self-processing (medial prefrontal cortex + posterior cingulate cortex) and valuation (ventral striatum + ventral medial prefrontal cortex) systems when reflecting on future-oriented core values (compared with everyday activities). Furthermore, this neural activity went on to predict changes in sedentary behavior consistent with successful affirmation in response to a separate physical activity intervention. These results highlight neural processes associated with successful self-affirmation, and further suggest that key pathways may be amplified in conjunction with prospection. PMID:26541373
A Full Virial Analysis of the Prestellar Cores in the Ophiuchus Molecular Cloud

NASA Astrophysics Data System (ADS)

Pattle, Kate; Ward-Thompson, Derek

We use SCUBA-2, HARP C18O J= 3 -> 2, Herschel and IRAM N2H+ J= 1 -> 0 observations of the Ophiuchus molecular cloud to identify and characterise the properties of the starless cores in the region. The SCUBA-2, HARP and Herschel data were taken as part of the JCMT and Herschel Gould Belt Surveys. We determine masses and temperatures and perform a full virial analysis on our cores, and find that our cores are all either bound or virialised, with gravitational energy and external pressure energy on average of similar importance in confining the cores. There is wide variation from region to region, with cores in the region influenced by B stars (Oph A) being substantially gravitationally bound, and cores in the most quiescent region (Oph C) being pressure-confined. We observe dissipation of turbulence in all our cores, and find that this dissipation is more effective in regions which do not contain outflow-driving protostars. Full details of this analysis are presented by Pattle et al. (2015).
The core domain as the force sensor of the yeast mechanosensitive TRP channel.

PubMed

Su, Zhenwei; Anishkin, Andriy; Kung, Ching; Saimi, Yoshiro

2011-12-01

Stretch-activated conductances are commonly encountered in careful electric recordings. Those of known proteins (TRP, MscL, MscS, K(2p), Kv, etc.) all share a core, which houses the ion pathway and the gate, but no recognizable force-sensing domain. Like animal TRPs, the yeast TRPY1 is polymodal, activated by stretch force, Ca(2+), etc. To test whether its S5-S6 core senses the stretch force, we tried to uncouple it from the peripheral domains by strategic peptide insertions to block the covalent core-periphery interactions. Insertion of long unstructured peptides should distort, if not disrupt, protein structures that transmit force. Such insertions between S6 and the C-terminal tail largely removed Ca(2+) activation, showing their effectiveness. However, such insertions as well as those between S5 and the N-terminal region, which includes S1-S4, did not significantly alter mechanosensitivity. Even insertions at both locations flanking the S5-S6 core did not much alter mechanosensitivity. Tryptophan scanning mutations in S5 were also constructed to perturb possible noncovalent core-periphery contacts. The testable tryptophan mutations also have little or no effects on mechanosensitivity. Boltzmann fits of the wild-type force-response curves agree with a structural homology model for a stretch-induced core expansion of ~2 nm(2) upon opening. We hypothesize that membrane tension pulls on S5-S6, expanding the core and opening the TRPY1 gate. The core being the major force sensor offers the simplest, though not the only, explanation of why so many channels of disparate designs are mechanically sensitive. Compared with the bacterial MscL, TRPY1 is much less sensitive to force, befitting a polymodal channel that relies on multiple stimuli.
Fusiform gyrus face selectivity relates to individual differences in facial recognition ability.

PubMed

Furl, Nicholas; Garrido, Lúcia; Dolan, Raymond J; Driver, Jon; Duchaine, Bradley

2011-07-01

Regions of the occipital and temporal lobes, including a region in the fusiform gyrus (FG), have been proposed to constitute a "core" visual representation system for faces, in part because they show face selectivity and face repetition suppression. But recent fMRI studies of developmental prosopagnosics (DPs) raise questions about whether these measures relate to face processing skills. Although DPs manifest deficient face processing, most studies to date have not shown unequivocal reductions of functional responses in the proposed core regions. We scanned 15 DPs and 15 non-DP control participants with fMRI while employing factor analysis to derive behavioral components related to face identification or other processes. Repetition suppression specific to facial identities in FG or to expression in FG and STS did not show compelling relationships with face identification ability. However, we identified robust relationships between face selectivity and face identification ability in FG across our sample for several convergent measures, including voxel-wise statistical parametric mapping, peak face selectivity in individually defined "fusiform face areas" (FFAs), and anatomical extents (cluster sizes) of those FFAs. None of these measures showed associations with behavioral expression or object recognition ability. As a group, DPs had reduced face-selective responses in bilateral FFA when compared with non-DPs. Individual DPs were also more likely than non-DPs to lack expected face-selective activity in core regions. These findings associate individual differences in face processing ability with selectivity in core face processing regions. This confirms that face selectivity can provide a valid marker for neural mechanisms that contribute to face identification ability.
Bifunctional catalytic electrode

NASA Technical Reports Server (NTRS)

Cisar, Alan (Inventor); Murphy, Oliver J. (Inventor); Clarke, Eric (Inventor)

2005-01-01

The present invention relates to an oxygen electrode for a unitized regenerative hydrogen-oxygen fuel cell and the unitized regenerative fuel cell having the oxygen electrode. The oxygen electrode contains components electrocatalytically active for the evolution of oxygen from water and the reduction of oxygen to water, and has a structure that supports the flow of both water and gases between the catalytically active surface and a flow field or electrode chamber for bulk flow of the fluids. The electrode has an electrocatalyst layer and a diffusion backing layer interspersed with hydrophilic and hydrophobic regions. The diffusion backing layer consists of a metal core having gas diffusion structures bonded to the metal core.
Suppression of survivin promoter activity by YM155 involves disruption of Sp1-DNA interaction in the survivin core promoter

PubMed Central

Cheng, Qiuying; Ling, Xiang; Haller, Andrew; Nakahara, Takahito; Yamanaka, Kentaro; Kita, Aya; Koutoku, Hiroshi; Takeuchi, Masahiro; Brattain, Michael G; Li, Fengzhi

2012-01-01

YM155, a novel survivin suppressant, shows potent antitumor activity against various human cancers and is currently in phase II clinical trials. In this study, we investigated whether YM155 selectively inhibits survivin transcription. We hypothesize that inhibition of survivin transcription plays a role in YM155-mediated survivin inhibition. We found that YM155 inhibited survivin promoter activity, while it showed minimal inhibitory effect on four control gene promoters in transfection and luciferase activity assay experiments, indicating its selectivity. Transfection of various survivin promoter-luciferase constructs followed by luciferase assays revealed that the survivin core promoter (269 bp) plays a major role in YM155-mediated inhibitory effects. However, flow cytometry analysis indicated that inhibition of survivin promoter activity by YM155 is cell cycle-independent without G1 cell arrests. Electrophoretic mobility shift assays (EMSA) identified that YM155 abrogates nuclear proteins binding to the region of -149 to -71, in which Sp1 is a major candidate, and that YM155 treatment induces Sp1 re-subcellular localization without inhibiting its expression. Forced expression of Sp1 neutralized YM155-mediated downregulation of survivin promoter activity. Consistently, mutation of the identified Sp1 sites in the oligonucleotide probe diminished DNA-protein interactions in EMSA experiments, and mutation of the Sp1 sites in the survivin promoter-luciferase construct diminished survivin promoter activity. These findings indicate that YM155 inhibition of survivin expression is at least in part through its inhibition of survivin transcription by disruption of Sp1 interaction with the region of -149 to -71 in the survivin core promoter. PMID:22773958
Fiber optic evanescent wave (FOEW) microbial sensor for dental application

NASA Astrophysics Data System (ADS)

Kishen, Anil; John, M. S.; Chen, Jun-Wei; Lim, Chu S.; Hu, Xiao; Asundi, Anand K.

2001-10-01

In this work a new approach based on the fiber Optic Evanescent Wave (FOEW) Spectroscopy is developed for the effective determination of dental caries activity in human saliva. The biosensor design utilized the exponentially decaying wave that extends to the lower index region of the optical fiber's core-cladding interface. In order to achieve this, a short length of the cladding is removed and the fiber core surface is coated with a porous glass medium using sol-gel technique. The acidogenic profile resulting from the Streptococcus mutans activity in the human saliva is monitored using an indicator, which was encapsulated within the porous coating. These investigations display the potential benefits of FOEW based microbial sensor to monitor caries activity in human saliva.
Radio jets in NGC 4151: where eMERLIN meets HST

NASA Astrophysics Data System (ADS)

Williams, D. R. A.; McHardy, I. M.; Baldi, R. D.; Beswick, R. J.; Argo, M. K.; Dullo, B. T.; Knapen, J. H.; Brinks, E.; Fenech, D. M.; Mundell, C. G.; Muxlow, T. W. B.; Panessa, F.; Rampadarath, H.; Westcott, J.

2017-12-01

We present high-sensitivity eMERLIN radio images of the Seyfert galaxy NGC 4151 at 1.51 GHz. We compare the new eMERLIN images to those from archival MERLIN observations in 1993 to determine the change in jet morphology in the 22 yr between observations. We report an increase by almost a factor of 2 in the peak flux density of the central core component, C4, thought to host the black hole, but a probable decrease in some other components, possibly due to adiabatic expansion. The core flux increase indicates an active galactic nucleus (AGN) that is currently active and feeding the jet. We detect no significant motion in 22 yr between C4 and the component C3, which is unresolved in the eMERLIN image. We present a spectral index image made within the 512 MHz band of the 1.51 GHz observations. The spectrum of the core, C4, is flatter than that of other components further out in the jet. We use HST emission-line images (H α, [O III] and [O II]) to study the connection between the jet and the emission-line region. Based on the changing emission-line ratios away from the core and comparison with the eMERLIN radio jet, we conclude that photoionization from the central AGN is responsible for the observed emission-line properties further than 4 arcsec (360 pc) from the core, C4. Within this region, a body of evidence (radio-line co-spatiality, low [O III]/H α and estimated fast shocks) suggests additional ionization from the jet.
Solar Forced Dansgaard/Oeschger Events?

NASA Technical Reports Server (NTRS)

Muscheler, R.; Beer, J.

2006-01-01

Climate records for the last ice age (which ended 11,500 years ago) show enormous climate fluctuations in the North Atlantic region - the so-called Dansgaard/Oeschger events. During these events air temperatures in Greenland changed on the order of 10 degrees Celsius within a few decades. These changes were attributed to shifts in ocean circulation which influences the warm water supply from lower latitudes to the North Atlantic region. Interestingly, the rapid warmings tend to recur approximately every 1500 years or multiples thereof. This has led researchers to speculate about an external cause for these changes with the variable Sun being one possible candidate. Support for this hypothesis came from climate reconstructions, which suggested that the Sun influenced the climate in the North Atlantic region on these time scales during the last approximately 12,000 years of relatively stable Holocene climate. However, Be-10 measurements in ice cores do not indicate that the Sun caused or triggered the Dansgaard/Oeschger events. Depending on the solar magnetic shielding more or less Be-10 is produced in the Earth's atmosphere. Therefore, 10Be can be used as a proxy for solar activity changes. Since Be-10 can be measured in ice cores, it is possible to compare the variable solar forcing directly with the climate record from the same ice core. This removes any uncertainties in the relative dating, and the solar-climate link can be reliably studied. Notwithstanding that some Dansgaard/Oeschger warmings could be related to increased solar activity, there is no indication that this is the case for all of the Dansgaard/Oeschger events. Therefore, during the last ice age the Be-10 and ice core climate data do not indicate a persistent solar influence on North Atlantic climate.
LeMMINGs - I. The eMERLIN legacy survey of nearby galaxies. 1.5-GHz parsec-scale radio structures and cores

NASA Astrophysics Data System (ADS)

Baldi, R. D.; Williams, D. R. A.; McHardy, I. M.; Beswick, R. J.; Argo, M. K.; Dullo, B. T.; Knapen, J. H.; Brinks, E.; Muxlow, T. W. B.; Aalto, S.; Alberdi, A.; Bendo, G. J.; Corbel, S.; Evans, R.; Fenech, D. M.; Green, D. A.; Klöckner, H.-R.; Körding, E.; Kharb, P.; Maccarone, T. J.; Martí-Vidal, I.; Mundell, C. G.; Panessa, F.; Peck, A. B.; Pérez-Torres, M. A.; Saikia, D. J.; Saikia, P.; Shankar, F.; Spencer, R. E.; Stevens, I. R.; Uttley, P.; Westcott, J.

2018-05-01

We present the first data release of high-resolution (≤0.2 arcsec) 1.5-GHz radio images of 103 nearby galaxies from the Palomar sample, observed with the eMERLIN array, as part of the LeMMINGs survey. This sample includes galaxies which are active (low-ionization nuclear emission-line regions [LINER] and Seyfert) and quiescent (H II galaxies and absorption line galaxies, ALGs), which are reclassified based upon revised emission-line diagrams. We detect radio emission ≳0.2 mJy for 47/103 galaxies (22/34 for LINERS, 4/4 for Seyferts, 16/51 for H II galaxies, and 5/14 for ALGs) with radio sizes typically of ≲100 pc. We identify the radio core position within the radio structures for 41 sources. Half of the sample shows jetted morphologies. The remaining half shows single radio cores or complex morphologies. LINERs show radio structures more core-brightened than Seyferts. Radio luminosities of the sample range from 1032 to 1040 erg s-1: LINERs and H II galaxies show the highest and lowest radio powers, respectively, while ALGs and Seyferts have intermediate luminosities. We find that radio core luminosities correlate with black hole (BH) mass down to ˜107 M⊙, but a break emerges at lower masses. Using [O III] line luminosity as a proxy for the accretion luminosity, active nuclei and jetted H II galaxies follow an optical Fundamental Plane of BH activity, suggesting a common disc-jet relationship. In conclusion, LINER nuclei are the scaled-down version of FR I radio galaxies; Seyferts show less collimated jets; H II galaxies may host weak active BHs and/or nuclear star-forming cores; and recurrent BH activity may account for ALG properties.
Regional convergence platforms in Europe—Innovation for space through technology partnerships

NASA Astrophysics Data System (ADS)

Bütfering, Peter

2010-05-01

Upcoming European and national space exploration programs and projects require new capabilities and scientific-technological solutions, and therefore external contributions to innovation. On the other hand European core (industrial) regions are searching of partners for innovation to strengthen their regional economy. In this context the German-based company European Space Innovation AG (former Adam Alva Neil)—highly experienced in the area of convergence activities between space and other sectors—has developed the model of regional convergence platforms (named 'SpaceInnovation'). These platforms are designed to foster technology partnerships between regional companies and institutes from 'non-space' and the space sector (agencies/industry). The article reflects this regional approach and shows examples in three different directions: SpaceInnovation Saar, an benchmark convergence platform initiated by the Saarland region. SpaceInnovation Europe, an European regions network approach. European SpaceInnovation Agent, an interface approach for systematic and sustainable convergence activities.
Neural Correlates of Belief and Emotion Attribution in Schizophrenia

PubMed Central

Lee, Junghee; Horan, William P.; Wynn, Jonathan K.; Green, Michael F.

2016-01-01

Impaired mental state attribution is a core social cognitive deficit in schizophrenia. With functional magnetic resonance imaging (fMRI), this study examined the extent to which the core neural system of mental state attribution is involved in mental state attribution, focusing on belief attribution and emotion attribution. Fifteen schizophrenia outpatients and 14 healthy controls performed two mental state attribution tasks in the scanner. In a Belief Attribution Task, after reading a short vignette, participants were asked infer either the belief of a character (a false belief condition) or a physical state of an affair (a false photograph condition). In an Emotion Attribution Task, participants were asked either to judge whether character(s) in pictures felt unpleasant, pleasant, or neutral emotion (other condition) or to look at pictures that did not have any human characters (view condition). fMRI data were analyzing focusing on a priori regions of interest (ROIs) of the core neural systems of mental state attribution: the medial prefrontal cortex (mPFC), temporoparietal junction (TPJ) and precuneus. An exploratory whole brain analysis was also performed. Both patients and controls showed greater activation in all four ROIs during the Belief Attribution Task than the Emotion Attribution Task. Patients also showed less activation in the precuneus and left TPJ compared to controls during the Belief Attribution Task. No significant group difference was found during the Emotion Attribution Task in any of ROIs. An exploratory whole brain analysis showed a similar pattern of neural activations. These findings suggest that while schizophrenia patients rely on the same neural network as controls do when attributing beliefs of others, patients did not show reduced activation in the key regions such as the TPJ. Further, this study did not find evidence for aberrant neural activation during emotion attribution or recruitment of compensatory brain regions in schizophrenia. PMID:27812142
A Conserved GPG-Motif in the HIV-1 Nef Core Is Required for Principal Nef-Activities

PubMed Central

Martínez-Bonet, Marta; Palladino, Claudia; Briz, Veronica; Rudolph, Jochen M.; Fackler, Oliver T.; Relloso, Miguel; Muñoz-Fernandez, Maria Angeles; Madrid, Ricardo

2015-01-01

To find out new determinants required for Nef activity we performed a functional alanine scanning analysis along a discrete but highly conserved region at the core of HIV-1 Nef. We identified the GPG-motif, located at the 121–137 region of HIV-1 NL4.3 Nef, as a novel protein signature strictly required for the p56Lck dependent Nef-induced CD4-downregulation in T-cells. Since the Nef-GPG motif was dispensable for CD4-downregulation in HeLa-CD4 cells, Nef/AP-1 interaction and Nef-dependent effects on Tf-R trafficking, the observed effects on CD4 downregulation cannot be attributed to structure constraints or to alterations on general protein trafficking. Besides, we found that the GPG-motif was also required for Nef-dependent inhibition of ring actin re-organization upon TCR triggering and MHCI downregulation, suggesting that the GPG-motif could actively cooperate with the Nef PxxP motif for these HIV-1 Nef-related effects. Finally, we observed that the Nef-GPG motif was required for optimal infectivity of those viruses produced in T-cells. According to these findings, we propose the conserved GPG-motif in HIV-1 Nef as functional region required for HIV-1 infectivity and therefore with a potential interest for the interference of Nef activity during HIV-1 infection. PMID:26700863
Common biology of craving across legal and illegal drugs - a quantitative meta-analysis of cue-reactivity brain response.

PubMed

Kühn, Simone; Gallinat, Jürgen

2011-04-01

The present quantitative meta-analysis set out to test whether cue-reactivity responses in humans differ across drugs of abuse and whether these responses constitute the biological basis of drug craving as a core psychopathology of addiction. By means of activation likelihood estimation, we investigated the concurrence of brain regions activated by cue-induced craving paradigms across studies on nicotine, alcohol and cocaine addicts. Furthermore, we analysed the concurrence of brain regions positively correlated with self-reported craving in nicotine and alcohol studies. We found direct overlap between nicotine, alcohol and cocaine cue reactivity in the ventral striatum. In addition, regions of close proximity were observed in the anterior cingulate cortex (ACC; nicotine and cocaine) and amygdala (alcohol, nicotine and cocaine). Brain regions of concurrence in drug cue-reactivity paradigms that overlapped with brain regions of concurrence in self-reported craving correlations were found in the ACC, ventral striatum and right pallidum (for alcohol). This first quantitative meta-analysis on drug cue reactivity identifies brain regions underlying nicotine, alcohol and cocaine dependency, i.e. the ventral striatum. The ACC, right pallidum and ventral striatum were related to drug cue reactivity as well as self-reported craving, suggesting that this set of brain regions constitutes the core circuit of drug craving in nicotine and alcohol addiction. © 2011 The Authors. European Journal of Neuroscience © 2011 Federation of European Neuroscience Societies and Blackwell Publishing Ltd.
Hepatitis C virus core protein activates autophagy through EIF2AK3 and ATF6 UPR pathway-mediated MAP1LC3B and ATG12 expression

PubMed Central

Wang, Ji; Kang, Rongyan; Huang, He; Xi, Xueyan; Wang, Bei; Wang, Jianwei; Zhao, Zhendong

2014-01-01

HCV infection induces autophagy, but how this occurs is unclear. Here, we report the induction of autophagy by the structural HCV core protein and subsequent endoplasmic reticular (ER) stress in Huh7 hepatoma cells. During ER stress, both the EIF2AK3 and ATF6 pathways of the unfolded protein response (UPR) were activated by HCV core protein. Then, these pathways upregulated transcription factors ATF4 and DDIT3. The ERN1-XBP1 pathway was not activated. Through ATF4 in the EIF2AK3 pathway, the autophagy gene ATG12 was upregulated. DDIT3 upregulated the transcription of autophagy gene MAP1LC3B (LC3B) by directly binding to the –253 to –99 base region of the LC3B promoter, contributing to the development of autophagy. Collectively, these data suggest not only a novel role for the HCV core protein in autophagy but also offer new insight into detailed molecular mechanisms with respect to HCV-induced autophagy, specifically how downstream UPR molecules regulate key autophagic gene expression. PMID:24589849
Development of Tool Representations in the Dorsal and Ventral Visual Object Processing Pathways.

PubMed

Kersey, Alyssa J; Clark, Tyia S; Lussier, Courtney A; Mahon, Bradford Z; Cantlon, Jessica F

2016-07-01

Tools represent a special class of objects, because they are processed across both the dorsal and ventral visual object processing pathways. Three core regions are known to be involved in tool processing: the left posterior middle temporal gyrus, the medial fusiform gyrus (bilaterally), and the left inferior parietal lobule. A critical and relatively unexplored issue concerns whether, in development, tool preferences emerge at the same time and to a similar degree across all regions of the tool-processing network. To test this issue, we used functional magnetic resonance imaging to measure the neural amplitude, peak location, and the dispersion of tool-related neural responses in the youngest sample of children tested to date in this domain (ages 4-8 years). We show that children recruit overlapping regions of the adult tool-processing network and also exhibit similar patterns of co-activation across the network to adults. The amplitude and co-activation data show that the core components of the tool-processing network are established by age 4. Our findings on the distributions of peak location and dispersion of activation indicate that the tool network undergoes refinement between ages 4 and 8 years. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.
Revealing the Nature of Blazar Radio Cores through Multifrequency Polarization Observations with the Korean VLBI Network

NASA Astrophysics Data System (ADS)

Park, Jongho; Kam, Minchul; Trippe, Sascha; Kang, Sincheol; Byun, Do-Young; Kim, Dae-Won; Algaba, Juan-Carlos; Lee, Sang-Sung; Zhao, Guang-Yao; Kino, Motoki; Shin, Naeun; Hada, Kazuhiro; Lee, Taeseok; Oh, Junghwan; Hodgson, Jeffrey A.; Sohn, Bong Won

2018-06-01

We study the linear polarization of the radio cores of eight blazars simultaneously at 22, 43, and 86 GHz with observations obtained by the Korean VLBI Network (KVN) in three epochs between late 2016 and early 2017 in the frame of the Plasma-physics of Active Galactic Nuclei project. We investigate the Faraday rotation measure (RM) of the cores; the RM is expected to increase with observing frequency if core positions depend on frequency owing to synchrotron self-absorption. We find a systematic increase of RMs at higher observing frequencies in our targets. The RM–ν relations follow power laws with indices distributed around 2, indicating conically expanding outflows serving as Faraday rotating media. Comparing our KVN data with contemporaneous optical polarization data from the Steward Observatory for a few sources, we find indications that the increase of RM with frequency saturates at frequencies of a few hundred gigahertz. This suggests that blazar cores are physical structures rather than simple τ = 1 surfaces. A single region, e.g., a recollimation shock, might dominate the jet emission downstream of the jet-launching region. We detect a sign change in the observed RMs of CTA 102 on a timescale of ≈1 month, which might be related to new superluminal components emerging from its core undergoing acceleration/deceleration and/or bending. We see indications for quasars having higher core RMs than BL Lac objects, which could be due to denser inflows/outflows in quasars.
fMRI evidence for strategic decision-making during resolution of pronoun reference

PubMed Central

McMillan, Corey T.; Clark, Robin; Gunawardena, Delani; Ryant, Neville; Grossman, Murray

2012-01-01

Pronouns are extraordinarily common in daily language yet little is known about the neural mechanisms that support decisions about pronoun reference. We propose a large-scale neural network for resolving pronoun reference that consists of two components. First, a core language network in peri-Sylvian cortex supports syntactic and semantic resources for interpreting pronoun meaning in sentences. Second, a frontal-parietal network that supports strategic decision-making is recruited to support probabilistic and risk-related components of resolving a pronoun’s referent. In an fMRI study of healthy young adults, we observed activation of left inferior frontal and superior temporal cortex, consistent with a language network. We also observed activation of brain regions not associated with traditional language areas. By manipulating the context of the pronoun, we were able to demonstrate recruitment of dorsolateral prefrontal cortex during probabilistic evaluation of a pronoun’s reference, and orbital frontal activation when a pronoun must adopt a risky referent. Together, these findings are consistent with a two-component model for resolving a pronoun’s reference that includes neuroanatomic regions supporting core linguistic and decision-making mechanisms. PMID:22245014
[Regulatory mechanisms in focal cerebral ischemia. New possibilities in neuroprotective therapy].

PubMed

Nagy, Zoltán; Simon, László; Bori, Zoltán

2002-03-20

Permanent or temporary disruption of cerebral blood flow rapidly depletes brain regions of their limited energy reserves (glycogen, glucose, oxygen, ATP) leading to an energy crisis. Tissue damage occurs due to the energy crisis. The central part of the damage, the ischaemic "core" region is surrounded by zones of the shell-like penumbra. Necrotic, as well as apoptotic cell death could be identified in the penumbra. Going away from the ischaemic core different neurochemical processes are occurring by space and time. "Immediate early response" genes (c-fos, fos-B, c-Jun, krox 20, 24) are activated, heatshock proteins (hsp 70, 72, HSF, HSE, HIF), cytokines (TNF-alpha, IL-1 beta), inflammatory factors (COX), adhesion and glial factors (ICAM-1, ELAM-1, P-selectin), vasoactive factors (IL-6, -10, PAF), reactive oxigen radicals and connected factors (O2, OH, NO, NOS, SOD) are produced within minutes and hours. Cell deaths, necrosis and apoptosis due to the activation of calpains, caspases and nucleases occur in days. In parallel, growth factors and plasticity proteins (BDNF, NGF, TGF-beta, VEGF, PDGF, GAP-43) are activated as a basis of functional rehabilitation.
Understanding the Differential Selectivity of Arrestins toward the Phosphorylation State of the Receptor.

PubMed

Sensoy, Ozge; Moreira, Irina S; Morra, Giulia

2016-09-21

Proteins in the arrestin family exhibit a conserved structural fold that nevertheless allows for significant differences in their selectivity for G-protein coupled receptors (GPCRs) and their phosphorylation states. To reveal the mechanism of activation that prepares arrestin for selective interaction with GPCRs, and to understand the basis for these differences, we used unbiased molecular dynamics simulations to compare the structural and dynamic properties of wild type Arr1 (Arr1-WT), Arr3 (Arr3-WT), and a constitutively active Arr1 mutant, Arr1-R175E, characterized by a perturbation of the phosphate recognition region called "polar core". We find that in our simulations the mutant evolves toward a conformation that resembles the known preactivated structures of an Arr1 splice-variant, and the structurally similar phosphopeptide-bound Arr2-WT, while this does not happen for Arr1-WT. Hence, we propose an activation allosteric mechanism connecting the perturbation of the polar core to a global conformational change, including the relative reorientation of N- and C-domains, and the emergence of electrostatic properties of putative binding surfaces. The underlying local structural changes are interpreted as markers of the evolution of an arrestin structure toward an active-like conformation. Similar activation related changes occur in Arr3-WT in the absence of any perturbation of the polar core, suggesting that this system could spontaneously visit preactivated states in solution. This hypothesis is proposed to explain the lower selectivity of Arr3 toward nonphosphorylated receptors. Moreover, by elucidating the allosteric mechanism underlying activation, we identify functionally critical regions on arrestin structure that can be targeted with drugs or chemical tools for functional modulation.

Core-shell Au-Pd nanoparticles as cathode catalysts for microbial fuel cell applications

PubMed Central

Yang, Gaixiu; Chen, Dong; Lv, Pengmei; Kong, Xiaoying; Sun, Yongming; Wang, Zhongming; Yuan, Zhenhong; Liu, Hui; Yang, Jun

2016-01-01

Bimetallic nanoparticles with core-shell structures usually display enhanced catalytic properties due to the lattice strain created between the core and shell regions. In this study, we demonstrate the application of bimetallic Au-Pd nanoparticles with an Au core and a thin Pd shell as cathode catalysts in microbial fuel cells, which represent a promising technology for wastewater treatment, while directly generating electrical energy. In specific, in comparison with the hollow structured Pt nanoparticles, a benchmark for the electrocatalysis, the bimetallic core-shell Au-Pd nanoparticles are found to have superior activity and stability for oxygen reduction reaction in a neutral condition due to the strong electronic interaction and lattice strain effect between the Au core and the Pd shell domains. The maximum power density generated in a membraneless single-chamber microbial fuel cell running on wastewater with core-shell Au-Pd as cathode catalysts is ca. 16.0 W m−3 and remains stable over 150 days, clearly illustrating the potential of core-shell nanostructures in the applications of microbial fuel cells. PMID:27734945
Historical levels of heavy metals reconstructed from sedimentary record in the Hejiang River, located in a typical mining region of Southern China.

PubMed

Wang, Shaopeng; Wang, Yinghui; Zhang, Ruijie; Wang, Weitao; Xu, Daoquan; Guo, Jing; Li, Pingyang; Yu, Kefu

2015-11-01

Historical levels of Pb, Zn, Cd, Cr, Cu, Ni, As, Fe, Al and Mn were found in C1 and C2 sediment cores from the Hejiang River, which is located in a typical mining region of Southern China, the levels date back approximately 57 and 83 years. Temporal variations in the core C1 around the mining peaked in the 1960s, after which they exhibited a decreasing trend, which reflects successful government management. Historical events such as the Pacific War and China's first 5-year economic plan were recorded in core C2, which was collected from the downstream portion of the Hejiang River. Enrichment factors (EF), geo-accumulation (Igeo), and excess flux indicate that severe contamination occurred during the period between 1956 and 1985 due to the release of high amounts of mining waste from human activities around the core C1 region. The highest EF value was displayed by As (67); this was followed by Pb (64), Cd (39), and Zn (35). In contrast, the core C2 sediments exhibited minor pollution because of dilution from tributaries (the Fu River and the Daning River) that do not flow through the mined area and because C2 was farther from the source of the metals. The results of the risk assessment codes (RAC) for both cores indicate that Cd posed a high risk to the local environment. Principal component analysis (PCA) and correlation analysis (CA) revealed that accumulation of heavy metals was mainly due to mining pollution. Copyright © 2015. Published by Elsevier B.V.
Global Disease Detection-Achievements in Applied Public Health Research, Capacity Building, and Public Health Diplomacy, 2001-2016.

PubMed

Rao, Carol Y; Goryoka, Grace W; Henao, Olga L; Clarke, Kevin R; Salyer, Stephanie J; Montgomery, Joel M

2017-11-01

The Centers for Disease Control and Prevention has established 10 Global Disease Detection (GDD) Program regional centers around the world that serve as centers of excellence for public health research on emerging and reemerging infectious diseases. The core activities of the GDD Program focus on applied public health research, surveillance, laboratory, public health informatics, and technical capacity building. During 2015-2016, program staff conducted 205 discrete projects on a range of topics, including acute respiratory illnesses, health systems strengthening, infectious diseases at the human-animal interface, and emerging infectious diseases. Projects incorporated multiple core activities, with technical capacity building being most prevalent. Collaborating with host countries to implement such projects promotes public health diplomacy. The GDD Program continues to work with countries to strengthen core capacities so that emerging diseases can be detected and stopped faster and closer to the source, thereby enhancing global health security.
Planck Cold Clumps in the λ Orionis Complex. II. Environmental Effects on Core Formation

NASA Astrophysics Data System (ADS)

Yi, Hee-Weon; Lee, Jeong-Eun; Liu, Tie; Kim, Kee-Tae; Choi, Minho; Eden, David; Evans, Neal J., II; Di Francesco, James; Fuller, Gary; Hirano, N.; Juvela, Mika; Kang, Sung-ju; Kim, Gwanjeong; Koch, Patrick M.; Lee, Chang Won; Li, Di; Liu, H.-Y. B.; Liu, Hong-Li; Liu, Sheng-Yuan; Rawlings, Mark G.; Ristorcelli, I.; Sanhueza, Patrico; Soam, Archana; Tatematsu, Ken’ichi; Thompson, Mark; Toth, L. V.; Wang, Ke; White, Glenn J.; Wu, Yuefang; Yang, Yao-Lun; the JCMT Large Program “SCOPE” Collaboration; TRAO Key Science Program “TOP” Collaboration

2018-06-01

Based on the 850 μm dust continuum data from SCUBA-2 at James Clerk Maxwell Telescope (JCMT), we compare overall properties of Planck Galactic Cold Clumps (PGCCs) in the λ Orionis cloud to those of PGCCs in the Orion A and B clouds. The Orion A and B clouds are well-known active star-forming regions, while the λ Orionis cloud has a different environment as a consequence of the interaction with a prominent OB association and a giant H II region. PGCCs in the λ Orionis cloud have higher dust temperatures (T d = 16.13 ± 0.15 K) and lower values of dust emissivity spectral index (β = 1.65 ± 0.02) than PGCCs in the Orion A (T d = 13.79 ± 0.21 K, β = 2.07 ± 0.03) and Orion B (T d = 13.82 ± 0.19 K, β = 1.96 ± 0.02) clouds. We find 119 substructures within the 40 detected PGCCs and identify them as cores. Out of a total of 119 cores, 15 cores are discovered in the λ Orionis cloud, while 74 and 30 cores are found in the Orion A and B clouds, respectively. The cores in the λ Orionis cloud show much lower mean values of size R = 0.08 pc, column density N(H2) = (9.5 ± 1.2) × 1022 cm‑2, number density n(H2) = (2.9 ± 0.4) × 105 cm‑3, and mass M core = 1.0 ± 0.3 M ⊙ compared to the cores in the Orion A [R = 0.11 pc, N(H2) = (2.3 ± 0.3) × 1023 cm‑2, n(H2) = (3.8 ± 0.5) × 105 cm‑3, and M core = 2.4 ± 0.3 M ⊙] and Orion B [R = 0.16 pc, N(H2) = (3.8 ± 0.4) × 1023 cm‑2, n(H2) = (15.6 ± 1.8) × 105 cm‑3, and M core = 2.7 ± 0.3 M ⊙] clouds. These core properties in the λ Orionis cloud can be attributed to the photodissociation and external heating by the nearby H II region, which may prevent the PGCCs from forming gravitationally bound structures and eventually disperse them. These results support the idea of negative stellar feedback on core formation.
Interaction of the Transcription Start Site Core Region and Transcription Factor YY1 Determine Ascorbate Transporter SVCT2 Exon 1a Promoter Activity

PubMed Central

Qiao, Huan; May, James M.

2012-01-01

Transcription of the ascorbate transporter, SVCT2, is driven by two distinct promoters in exon 1 of the transporter sequence. The exon 1a promoter lacks a classical transcription start site and little is known about regulation of promoter activity in the transcription start site core (TSSC) region. Here we present evidence that the TSSC binds the multifunctional initiator-binding protein YY1. Electrophoresis shift assays using YY1 antibody showed that YY1 is present as one of two major complexes that specifically bind to the TSSC. The other complex contains the transcription factor NF-Y. Mutations in the TSSC that decreased YY1 binding also impaired the exon 1a promoter activity despite the presence of an upstream activating NF-Y/USF complex, suggesting that YY1 is involved in the regulation of the exon 1a transcription. Furthermore, YY1 interaction with NF-Y and/or USF synergistically enhanced the exon 1a promoter activity in transient transfections and co-activator p300 enhanced their synergistic activation. We propose that the TSSC plays a vital role in the exon 1a transcription and that this function is partially carried out by the transcription factor YY1. Moreover, co-activator p300 might be able to synergistically enhance the TSSC function via a “bridge” mechanism with upstream sequences. PMID:22532872
Recent Increases in Wildfires in the Himalayas and Surrounding Regions Detected in Central Tibetan Ice Core Records

NASA Astrophysics Data System (ADS)

You, Chao; Yao, Tandong; Xu, Chao

2018-03-01

Changes in fire activity across regions around the Tibetan Plateau are poorly understood, especially under the recent warming and drying trends. In this work, we report records of the specific fire tracer levoglucosan in a central Tibetan ice core, indicating a rapid increase in wildfires across the Himalayas and surroundings at the beginning of the 21st century. The climate system, especially precipitation changes, modulates the annual variability of wildfires in regions around the Tibetan Plateau. Decreasing premonsoon precipitation has prolonged the dry seasons across Himalayan regions affected by the Indian summer monsoon; meanwhile, increasing precipitation over the arid and semiarid Indus River Plain promotes plant growth and thereby increases biofuel availability. These trends have therefore induced increased frequencies of strong wildfires in the Himalayas and surroundings. Increasing strong wildfire events can potentially enhance black carbon deposits on Himalayan glaciers, which would impact glacial melting during the premonsoon wildfire seasons in the near future.
DOE Office of Scientific and Technical Information (OSTI.GOV)

Follis, Kathryn E.; York, Joanne; Nunberg, Jack H.

The fusion subunit of the SARS-CoV S glycoprotein contains two regions of hydrophobic heptad-repeat amino acid sequences that have been shown in biophysical studies to form a six-helix bundle structure typical of the fusion-active core found in Class I viral fusion proteins. Here, we have applied serine-scanning mutagenesis to the C-terminal-most heptad-repeat region in the SARS-CoV S glycoprotein to investigate the functional role of this region in membrane fusion. We show that hydrophobic sidechains at a and d positions only within the short helical segment of the C-terminal heptad-repeat region (I1161, I1165, L1168, A1172, and L1175) are critical for cell-cellmore » fusion. Serine mutations at outlying heptad-repeat residues that form an extended chain in the core structure (V1158, L1179, and L1182) do not affect fusogenicity. Our study provides genetic evidence for the important role of {alpha}-helical packing in promoting S glycoprotein-mediated membrane fusion.« less
Microstructural study of brass matrix internal tin multifilamentary Nb3Sn superconductors

NASA Astrophysics Data System (ADS)

Banno, Nobuya; Miyamoto, Yasuo; Tachikawa, Kyoji

2018-03-01

Zn addition to the Cu matrix in internal-tin-processed Nb3Sn superconductors is attractive in terms of the growth kinetics of the Nb3Sn layers. Sn activity is enhanced in the Cu-Zn (brass) matrix, which accelerates Nb3Sn layer formation. Here, we prepared multifilamentary wires using a brass matrix with a Nb core diameter of less than 10 μm and investigated the potential for further Jc improvement through microstructural and microchemical studies. Ti was added into the Sn cores in the precursor wire. Microchemical analysis showed that Ti accumulates between subelements consisting of Nb cores, which blocks Sn diffusion through this region when the spacing between the subelements in the precursor wire is a few microns. The average grain size was found to be about 230 nm through image analysis. To date, matrix Jc values of 1470 and 640 A/mm-2 have been obtained at 12 and 16 T, respectively. The area fraction of Nb cores in the filamentary region of the precursor wire was about 36.3%. There was still some unreacted Nb core area after heat treatment. Insufficient Ti diffusion into the Nb3Sn layers was identified in the outer subelements. These findings suggest that there is still room for improvement in Jc.
The Structure of Cognition: Attentional Episodes in Mind and Brain

PubMed Central

Duncan, John

2013-01-01

Cognition is organized in a structured series of attentional episodes, allowing complex problems to be addressed through solution of simpler subproblems. A “multiple-demand” (MD) system of frontal and parietal cortex is active in many different kinds of tasks, and using data from neuroimaging, electrophysiology, neuropsychology, and cognitive studies of intelligence, I propose a core role for MD regions in assembly of the attentional episode. Monkey and human data show dynamic neural coding of attended information across multiple MD regions, with rapid communication within and between regions. Neuropsychological and imaging data link MD function to fluid intelligence, explaining some but not all “executive” deficits after frontal lobe lesions. Cognitive studies link fluid intelligence to goal neglect, and the problem of dividing complex task requirements into focused parts. Like the innate releasing mechanism of ethology, I suggest that construction of the attentional episode provides a core organizational principle for complex, adaptive cognition. PMID:24094101
Metal distribution in sediment cores from São Paulo State Coast, Brazil.

PubMed

Silva, Paulo S C; Damatto, Sandra R; Maldonado, Caio; Fávaro, Deboráh I T; Mazzilli, Barbara P

2011-05-01

Ten sediment core samples with lengths ranging from 35 to 100 cm were collected in the Baixada Santista region and analyzed to determine As, Br, Co, Cr, Cs, Fe, Rb, Sb, Ta, Th, U, Zn and rare earths (Sc, Ce, Eu, La, Lu, Nd, Sm, Tb and Yb) level concentrations using instrumental neutron activation analysis (INAA). The studied region is located in the southeastern coast of São Paulo State and is comprised of a densely urbanized area, the largest industrial complex of the country, with a predominance of petrochemical and fertilizer plants. It is also home to Brazil's most important and busiest port. The conclusions found that the As, La, Sm, Ne, Ce, Eu, Hf, Ta, Th, and U elements have a high background level in the region and that Fe and Zn were the main indicators of anthropogenic contribution in the sediments. Copyright © 2011 Elsevier Ltd. All rights reserved.
Mid-Holocene paleoclimatic changes and solar activity in San'in District, mid-latitude North Pacific Region

NASA Astrophysics Data System (ADS)

Okazaki, Y.; Seto, K.; Sakai, T.; Ooki, A.; yamada, K.; Dettman, D. L.

2011-12-01

Evidence shows that solar activity influences climate on a global scale. In the mid-latitude region, climate change is expected to change precipitation patterns. Concurrently, variation in solar activity may influence phytoplankton productivity. It seems that these changes should be recorded in sediment and organic matter deposits in coastal lagoons. In this study, we discuss the relationship between climate change and solar activity in the mid-Holocene in the northern hemisphere mid-latitude region based on grain size analysis, total organic carbon (TOC) content and organic carbon accumulation rates (Corg A.R.) in coastal lagoon sediment core samples. The INB core was drilled to produce a high resolution record of Holocene paleoenvironmental change in the San'in District, western Japan. The core is 19.17m in total length and is divided into Unit I~VII by lithofacies. Holocene sediment, primarily organic silt, forms Unit III and above in this core. Unit III was deposited from 8.4 to 5.4 ka, when sea level rose during the Jomon transgression; its depositional environment is a coastal lagoon. Progradation of the river mouth during the sea level rise lead to an increase in the C/N ratio of organic matter. Unit IV contains the volcanic Shigaku pyroclastic flow (the sixth stage of volcanic activity of the Sanbe volcano), and Unit V reflects deposition in a freshwater lake or swamp. Above this aggredational sediments were deposited by small rivers. This study focused on the coastal lagoon sediments of Unit III (8.4 to 5.4 ka); we carried out CNS elemental analysis and grain size analysis with a resolution of approximately five years. TOC content is variable and increases from 0.5 to 5%. Variation in TOC content is relatively well correlated with atmospheric radiocarbon 14C (Delta 14C) and therefore with solar activity, although the relationship is unclear in the upper portion of Unit III. The trend in Corg A.R. is different than TOC contents, about 40g/m/yr at ~8ka and about 20g/m/yr at 6-7 ka. This trend is also observed in a sediment core of Nakaumi Lagoon in San'in District, where it is due to a dilution effect caused by increased precipitation and high productivity because of a higher nutrient load during a warm interval (Sampei et al.,1997). It seems that the correspondence between TOC content and Delta 14C in this core is caused by similar factors. That is, a positive peak of Delta 14C indicating low solar activity and a cold period shows high TOC content because of concentration of TOC. On the other hand, a negative peak in Delta 14C indicates a warm period, and has a low TOC content because of clastic dilution. In the upper portion this relationship becomes complex because of changes in the terrestrial plant input due to river mouth progradation. Using these relationships, we may be able to estimate precipitation change based on the change in TOC content, and discuss its implications for global climate change.
Nuclear factor Y regulates ancient budgerigar hepadnavirus core promoter activity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shen, Zhongliang; Liu, Yanfeng; Luo, Mengjun

Endogenous viral elements (EVE) in animal genomes are the fossil records of ancient viruses and provide invaluable information on the origin and evolution of extant viruses. Extant hepadnaviruses include avihepadnaviruses of birds and orthohepadnaviruses of mammals. The core promoter (Cp) of hepadnaviruses is vital for viral gene expression and replication. We previously identified in the budgerigar genome two EVEs that contain the full-length genome of an ancient budgerigar hepadnavirus (eBHBV1 and eBHBV2). Here, we found eBHBV1 Cp and eBHBV2 Cp were active in several human and chicken cell lines. A region from nt −85 to −11 in eBHBV1 Cp was critical formore » the promoter activity. Bioinformatic analysis revealed a putative binding site of nuclear factor Y (NF-Y), a ubiquitous transcription factor, at nt −64 to −50 in eBHBV1 Cp. The NF-Y core binding site (ATTGG, nt −58 to −54) was essential for eBHBV1 Cp activity. The same results were obtained with eBHBV2 Cp and duck hepatitis B virus Cp. The subunit A of NF-Y (NF-YA) was recruited via the NF-Y core binding site to eBHBV1 Cp and upregulated the promoter activity. Finally, the NF-Y core binding site is conserved in the Cps of all the extant avihepadnaviruses but not of orthohepadnaviruses. Interestingly, a putative and functionally important NF-Y core binding site is located at nt −21 to −17 in the Cp of human hepatitis B virus. In conclusion, our findings have pinpointed an evolutionary conserved and functionally critical NF-Y binding element in the Cps of avihepadnaviruses. - Highlights: • Endogenous budgerigar hepadnavirus (eBHBV) core promoters (Cps) are active in cells. • NF-Y binding site exists in the Cps of eBHBVs and all the extant avihepadnaviruses. • NF-Y binding and mediated upregulation is critical for eBHBV Cp activity.« less
Powering prolonged hydrothermal activity inside Enceladus

NASA Astrophysics Data System (ADS)

Choblet, Gaël; Tobie, Gabriel; Sotin, Christophe; Běhounková, Marie; Čadek, Ondřej; Postberg, Frank; Souček, Ondřej

2017-12-01

Geophysical data from the Cassini spacecraft imply the presence of a global ocean underneath the ice shell of Enceladus1, only a few kilometres below the surface in the South Polar Terrain2-4. Chemical analyses indicate that the ocean is salty5 and is fed by ongoing hydrothermal activity6-8. In order to explain these observations, an abnormally high heat power (>20 billion watts) is required, as well as a mechanism to focus endogenic activity at the south pole9,10. Here, we show that more than 10 GW of heat can be generated by tidal friction inside the unconsolidated rocky core. Water transport in the tidally heated permeable core results in hot narrow upwellings with temperatures exceeding 363 K, characterized by powerful (1-5 GW) hotspots at the seafloor, particularly at the south pole. The release of heat in narrow regions favours intense interaction between water and rock, and the transport of hydrothermal products from the core to the plume sources. We are thus able to explain the main global characteristics of Enceladus: global ocean, strong dissipation, reduced ice-shell thickness at the south pole and seafloor activity. We predict that this endogenic activity can be sustained for tens of millions to billions of years.
Earth's Climate History from Glaciers and Ice Cores

NASA Astrophysics Data System (ADS)

Thompson, Lonnie

2013-03-01

Glaciers serve both as recorders and early indicators of climate change. Over the past 35 years our research team has recovered climatic and environmental histories from ice cores drilled in both Polar Regions and from low to mid-latitude, high-elevation ice fields. Those ice core -derived proxy records extending back 25,000 years have made it possible to compare glacial stage conditions in the Tropics with those in the Polar Regions. High-resolution records of δ18O (in part a temperature proxy) demonstrate that the current warming at high elevations in the mid- to lower latitudes is unprecedented for the last two millennia, although at many sites the early Holocene was warmer than today. Remarkable similarities between changes in the highland and coastal cultures of Peru and regional climate variability, especially precipitation, imply a strong connection between prehistoric human activities and regional climate. Ice cores retrieved from shrinking glaciers around the world confirm their continuous existence for periods ranging from hundreds to thousands of years, suggesting that current climatological conditions in those regions today are different from those under which these ice fields originated and have been sustained. The ongoing widespread melting of high-elevation glaciers and ice caps, particularly in low to middle latitudes, provides strong evidence that a large-scale, pervasive and, in some cases, rapid change in Earth's climate system is underway. Observations of glacier shrinkage during the 20th and 21st century girdle the globe from the South American Andes, the Himalayas, Kilimanjaro (Tanzania, Africa) and glaciers near Puncak Jaya, Indonesia (New Guinea). The history and fate of these ice caps, told through the adventure, beauty and the scientific evidence from some of world's most remote mountain tops, provide a global perspective for contemporary climate. NSF Paleoclimate Program
Neural representation of emotion regulation goals.

PubMed

Morawetz, Carmen; Bode, Stefan; Baudewig, Juergen; Jacobs, Arthur M; Heekeren, Hauke R

2016-02-01

The use of top-down cognitive control mechanisms to regulate emotional responses as circumstances change is critical for mental and physical health. Several theoretical models of emotion regulation have been postulated; it remains unclear, however, in which brain regions emotion regulation goals (e.g., the downregulation of fear) are represented. Here, we examined the neural mechanisms of regulating emotion using fMRI and identified brain regions representing reappraisal goals. Using a multimethodological analysis approach, combining standard activation-based and pattern-information analyses, we identified a distributed network of lateral frontal, temporal, and parietal regions implicated in reappraisal and within it, a core system that represents reappraisal goals in an abstract, stimulus-independent fashion. Within this core system, the neural pattern-separability in a subset of regions including the left inferior frontal gyrus, middle temporal gyrus, and inferior parietal lobe was related to the success in emotion regulation. Those brain regions might link the prefrontal control regions with the subcortical affective regions. Given the strong association of this subsystem with inner speech functions and semantic memory, we conclude that those cognitive mechanisms may be used for orchestrating emotion regulation. Hum Brain Mapp 37:600-620, 2016. © 2015 Wiley Periodicals, Inc. © 2015 Wiley Periodicals, Inc.
Solar Coronal Heating and the Magnetic Flux Content of the Network

NASA Technical Reports Server (NTRS)

Falconer, D. A.; Moore, R. L.; Porter, J. G.; Hathaway, D. H.

2003-01-01

We investigate the heating of the quiet corona by measuring the increase of coronal luminosity with the amount of magnetic flux in the underlying network at solar minimum when there were no active regions on the face of the Sun. The coronal luminosity is measured from Fe IX/X-Fe XII pairs of coronal images from SOHO/EIT. The network magnetic flux content is measured from SOHO/MDI magnetograms. We find that the luminosity of the corona in our quiet regions increases roughly in proportion to the square root of the magnetic flux content of the network and roughly in proportion to the length of the perimeter of the network magnetic flux clumps. From (1) this result, (2) other observations of many fine-scale explosive events at the edges of network flux clumps, and (3) a demonstration that it is energetically feasible for the heating of the corona in quiet regions to be driven by explosions of granule-sized sheared-core magnetic bipoles embedded in the edges of network flux clumps, we infer that in quiet regions that are not influenced by active regions the corona is mainly heated by such magnetic activity in the edges of the network flux clumps. Our observational results together with our feasibility analysis allow us to predict that (1) at the edges of the network flux clumps there are many transient sheared-core bipoles of the size and lifetime of granules and having transverse field strengths > approx. 100 G, (2) approx. 30 of these bipoles are present per supergranule, and (3) most spicules are produced by explosions of these bipoles.
Solar Coronal Heating and the Magnetic Flux Content of the Network

NASA Technical Reports Server (NTRS)

Moore, R. L.; Falconer, D. A.; Porter, J. G.; Hathaway, D. H.

2003-01-01

We investigate the heating of the quiet corona by measuring the increase of coronal luminosity with the amount of magnetic flux in the underlying network at solar minimum when there were no active regions on the face of the Sun. The coronal luminosity is measured from Fe IX/X-Fe XII pairs of coronal images from SOHO/EIT. The network magnetic flux content is measured from SOHO/MDI magnetograms. We find that the luminosity of the corona in our quiet regions increases roughly in proportion to the square root of the magnetic flux content of the network and roughly in proportion to the length of the perimeter of the network magnetic flux clumps. From (1) this result, (2) other observations of many fine-scale explosive events at the edges of network flux clumps, and (3) a demonstration that it is energetically feasible for the heating of the corona in quiet regions to be driven by explosions of granule-sized sheared-core magnetic bipoles embedded in the edges of network flux clumps, we infer that in quiet regions that are not influenced by active regions the corona is mainly heated by such magnetic activity in the edges of the network flux clumps. Our observational results together with our feasibility analysis allow us to predict that (1) at the edges of the network flux clumps there are many transient sheared-core bipoles of the size and lifetime of granules and having transverse field strengths greater than approximately - 100 G, (2) approximately 30 of these bipoles are present per supergranule, and (3) most spicules are produced by explosions of these bipoles.
Hydroclimatic signal and LBK cultural activity in the Upper and Lower Rhine, inferred from abandoned channel fill deposits

NASA Astrophysics Data System (ADS)

Berger, J. F.; Salvador, P. G.; Erkens, G.; Toonen, W. H. J.; Purdue, L.; Barra, A.; Houben, P.

2012-04-01

The Linear Band Ceramic (LBK) culture represents a major event in the spread of agriculture in Europe. Occupation particularly occurred in river valleys, with largest densities found along the rivers Danube, Elbe and Rhine. The interaction between the emergence of this culture and the dominant climatic and hydrological conditions is not yet fully established. As part of the ANR OBRESOC project, in which LBK activity is investigated in a transect from France (Marne river) to the catchment of the Danube river (Tisza), we studied palaeo-environmental changes in the Rhine valley between 7600-6600 cal. yrs. BP. Focus is on the Upper Rhine Graben and the Lower Rhine valley near the Rhine Delta apex, which is thought to be a peripheral region of LBK-activity. In these regions, a total of five cores from abandoned channels were analysed to reconstruct palaeo-environmental dynamics in vegetation and fluvial activity during the period of LBK development. Abandoned channel fills are excellent sites to perform detailed studies of palaeo-environmental dynamics, as they (i) form proximal locations to occupation sites of the LBK culture, (ii) act as efficient traps of sediments in which different environmental proxies are well preserved, (iii) contain well-datable material for the construction of detailed age-depth models, and (iv) provide a long proxy record, potentially over more than a millennium at a single site. On all cores, high resolution analysis of channel fill deposits (grain size and geophysical properties) and biotic proxies (micro-charcoal fluxes and pollen assemblages) were preformed to reconstruct palaeo-environmental signals, such as changes in fluvial activity, forest fires, and vegetation evolution, which may be related to agricultural activity, and climatic and hydrogeomorphic changes in the region. In this contribution we compare the results of the high-resolution core analyses (1,5 to 5m sequences for the studied timeframe) derived from the more densely populated Upper Rhine Graben with those from the more peripheral Lower Rhine valley to decipher anthropogenic impacts from natural environmental circumstances. Moreover, we try to discriminate the local to the regional signals recorded in the fluvial archives, by comparing the proxy data with the pedo-sedimentary context. The ultimate goal is to model socio-environmental interactions during the LBK culture progression to Western Europe with MMA.
Hustle and Bustle at Center of Milky Way

NASA Image and Video Library

2013-05-07

This artist concept illustrates the frenzied activity at the core of our Milky Way galaxy. The galactic center hosts a supermassive black hole in the region known as Sagittarius A*, or Sgr A*, with a mass of about four million times that of our sun.
Insights into the Structure of Dimeric RNA Helicase CsdA and Indispensable Role of Its C-Terminal Regions

DOE PAGES

Xu, Ling; Wang, Lijun; Peng, Junhui; ...

2017-12-05

CsdA has been proposed to be essential for the biogenesis of ribosome and gene regulation after cold shock. However, the structure of CsdA and the function of its long C-terminal regions are still unclear. For this study, we solved all of the domain structures of CsdA and found two previously uncharacterized auxiliary domains: a dimerization domain (DD) and an RNA-binding domain (RBD). Small-angle X-ray scattering experiments helped to track the conformational flexibilities of the helicase core domains and C-terminal regions. Biochemical assays revealed that DD is indispensable for stabilizing the CsdA dimeric structure. We also demonstrate for the first timemore » that CsdA functions as a stable dimer at low temperature. The C-terminal regions are critical for RNA binding and efficient enzymatic activities. CsdA_RBD could specifically bind to the regions with a preference for single-stranded G-rich RNA, which may help to bring the helicase core to unwind the adjacent duplex.« less

Insights into the Structure of Dimeric RNA Helicase CsdA and Indispensable Role of Its C-Terminal Regions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Xu, Ling; Wang, Lijun; Peng, Junhui

CsdA has been proposed to be essential for the biogenesis of ribosome and gene regulation after cold shock. However, the structure of CsdA and the function of its long C-terminal regions are still unclear. For this study, we solved all of the domain structures of CsdA and found two previously uncharacterized auxiliary domains: a dimerization domain (DD) and an RNA-binding domain (RBD). Small-angle X-ray scattering experiments helped to track the conformational flexibilities of the helicase core domains and C-terminal regions. Biochemical assays revealed that DD is indispensable for stabilizing the CsdA dimeric structure. We also demonstrate for the first timemore » that CsdA functions as a stable dimer at low temperature. The C-terminal regions are critical for RNA binding and efficient enzymatic activities. CsdA_RBD could specifically bind to the regions with a preference for single-stranded G-rich RNA, which may help to bring the helicase core to unwind the adjacent duplex.« less
Insights into the Structure of Dimeric RNA Helicase CsdA and Indispensable Role of Its C-Terminal Regions.

PubMed

Xu, Ling; Wang, Lijun; Peng, Junhui; Li, Fudong; Wu, Lijie; Zhang, Beibei; Lv, Mengqi; Zhang, Jiahai; Gong, Qingguo; Zhang, Rongguang; Zuo, Xiaobing; Zhang, Zhiyong; Wu, Jihui; Tang, Yajun; Shi, Yunyu

2017-12-05

CsdA has been proposed to be essential for the biogenesis of ribosome and gene regulation after cold shock. However, the structure of CsdA and the function of its long C-terminal regions are still unclear. Here, we solved all of the domain structures of CsdA and found two previously uncharacterized auxiliary domains: a dimerization domain (DD) and an RNA-binding domain (RBD). Small-angle X-ray scattering experiments helped to track the conformational flexibilities of the helicase core domains and C-terminal regions. Biochemical assays revealed that DD is indispensable for stabilizing the CsdA dimeric structure. We also demonstrate for the first time that CsdA functions as a stable dimer at low temperature. The C-terminal regions are critical for RNA binding and efficient enzymatic activities. CsdA_RBD could specifically bind to the regions with a preference for single-stranded G-rich RNA, which may help to bring the helicase core to unwind the adjacent duplex. Copyright © 2017 Elsevier Ltd. All rights reserved.
Spectral engineering of optical fiber through active nanoparticle doping

NASA Astrophysics Data System (ADS)

Lindstrom-James, Tiffany

The spectral engineering of optical fiber is a method of intentional doping of the core region in order to absorb/emit specific wavelengths of light therby providing enhanced performance over current fibers. Efforts here focused on developing an understanding of optically active nanoparticles based on alkaline earth fluorides that could be easily and homogeneously incorporated into the core of a silica based optical fiber preform and result in efficient and tailorable spectral emissions. Doped and undoped calcium, strontium and barium fluoride nanoparticles were successfully synthesized and characterized for their physical, chemical, and optical behavior. Distinct spectroscopic differences as a result of different host materials, varying rare earth doping levels and processing conditions, indicated the ability to influence the spectral behavior of the doped nanoparticle. By using photoluminescence to predict diffusion behavior, the application of a simple one dimensional model for diffusion provided a method for predicting the diffusion coefficient of europium ions in alkaline earth fluorides with order of magnitude accuracy. Modified chemical vapor deposition derived silica preforms were individually solution doped with europium doped alkaline earth fluoride nanoparticles. By using the rare earth doped alkaline earth fluoride nanoparticles as the dopant materials in the core of optical fiber preforms, the resultant optical properties of the glass were significantly influenced by their presence in the core. The incorporation of these rare earth doped alkaline earth fluoride nanoparticles was found to significantly influence the local chemical and structural environment about the rare earth ion, demonstrated homogeneity and uniform distribution of the rare earth dopant and resulted in specifically unique spectral behavior when compared to conventional doping methods. A more detailed structural model of the doped core glass region has been developed based on the spectral behavior of these active fiber preforms. It has been shown that rare earth doping of alkaline earth fluoride nanoparticles provides a material which can be 'tuned' to specific applications through the use of different host materials, processing conditions and doping levels of the rare earth and when used as dopant materials for active optical fibers, provides a means to tailor the optical behavior.
Self-affirmation activates brain systems associated with self-related processing and reward and is reinforced by future orientation.

PubMed

Cascio, Christopher N; O'Donnell, Matthew Brook; Tinney, Francis J; Lieberman, Matthew D; Taylor, Shelley E; Strecher, Victor J; Falk, Emily B

2016-04-01

Self-affirmation theory posits that people are motivated to maintain a positive self-view and that threats to perceived self-competence are met with resistance. When threatened, self-affirmations can restore self-competence by allowing individuals to reflect on sources of self-worth, such as core values. Many questions exist, however, about the underlying mechanisms associated with self-affirmation. We examined the neural mechanisms of self-affirmation with a task developed for use in a functional magnetic resonance imaging environment. Results of a region of interest analysis demonstrated that participants who were affirmed (compared with unaffirmed participants) showed increased activity in key regions of the brain's self-processing (medial prefrontal cortex + posterior cingulate cortex) and valuation (ventral striatum + ventral medial prefrontal cortex) systems when reflecting on future-oriented core values (compared with everyday activities). Furthermore, this neural activity went on to predict changes in sedentary behavior consistent with successful affirmation in response to a separate physical activity intervention. These results highlight neural processes associated with successful self-affirmation, and further suggest that key pathways may be amplified in conjunction with prospection. © The Author (2015). Published by Oxford University Press. For Permissions, please email: journals.permissions@oup.com.
Visualising neuroinflammation in post-stroke patients: a comparative PET study with the TSPO molecular imaging biomarkers [11C]PK11195 and [11C]vinpocetine.

PubMed

Gulyas, Balazs; Toth, Miklos; Vas, Adam; Shchukin, Evgeni; Kostulas, Konstantinos; Hillert, Jan; Halldin, Christer

2012-01-01

With the main objective of comparing the prospective diagnostic power of two 11C-labelled molecular imaging biomarkers with affinity for TSPO and used for the visualisation of activated microglia after a stroke, we measured with positron emission tomography (PET) in four post-stroke patients the regional brain uptake and binding potential of [11C]vinpocetine and [11C]PK11195. Percentage standard uptake values (%SUV) and binding potential (BPND) were used as outcome measures. The total peak brain uptake value and average global brain uptake value were higher for [11C]vinpocetine than for [11C]PK11195. The regional %SUV values were significantly higher for [11C]vinpocetine than for [11C]PK11195 in the hemispheres as well as in almost all standard brain regions. The %SUV values of [11C]vinpocetine were higher in the peri-infarct zone than in the ischaemic core, however, the difference did not prove to be significant. There was basically no difference in %SUV values between the ischaemic core and the peri-infarct zone for [11C]PK11195. The BPND values for [11C]vinpocetine were higher in all standard regions than those for [11C]PK11195, but the difference was not significant between them. The BPND values of [11C]vinpocetine were higher in the peri-infarct zone than in the ischaemic core, however, the difference did not prove to be significant. A comparative analysis of the two ligands indicates that [11C]vinpocetine shows a number of favourable characteristics over [11C]PK11195, but to demonstrate that it may serve as a prospective molecular imaging biomarker of microglia activation in post-stroke patients, further studies are required.
Segmenting breast cancerous regions in thermal images using fuzzy active contours

PubMed Central

Ghayoumi Zadeh, Hossein; Haddadnia, Javad; Rahmani Seryasat, Omid; Mostafavi Isfahani, Sayed Mohammad

2016-01-01

Breast cancer is the main cause of death among young women in developing countries. The human body temperature carries critical medical information related to the overall body status. Abnormal rise in total and regional body temperature is a natural symptom in diagnosing many diseases. Thermal imaging (Thermography) utilizes infrared beams which are fast, non-invasive, and non-contact and the output created images by this technique are flexible and useful to monitor the temperature of the human body. In some clinical studies and biopsy tests, it is necessary for the clinician to know the extent of the cancerous area. In such cases, the thermal image is very useful. In the same line, to detect the cancerous tissue core, thermal imaging is beneficial. This paper presents a fully automated approach to detect the thermal edge and core of the cancerous area in thermography images. In order to evaluate the proposed method, 60 patients with an average age of 44/9 were chosen. These cases were suspected of breast tissue disease. These patients referred to Tehran Imam Khomeini Imaging Center. Clinical examinations such as ultrasound, biopsy, questionnaire, and eventually thermography were done precisely on these individuals. Finally, the proposed model is applied for segmenting the proved abnormal area in thermal images. The proposed model is based on a fuzzy active contour designed by fuzzy logic. The presented method can segment cancerous tissue areas from its borders in thermal images of the breast area. In order to evaluate the proposed algorithm, Hausdorff and mean distance between manual and automatic method were used. Estimation of distance was conducted to accurately separate the thermal core and edge. Hausdorff distance between the proposed and the manual method for thermal core and edge was 0.4719 ± 0.4389, 0.3171 ± 0.1056 mm respectively, and the average distance between the proposed and the manual method for core and thermal edge was 0.0845 ± 0.0619, 0.0710 ± 0.0381 mm respectively. Furthermore, the sensitivity in recognizing the thermal pattern in breast tissue masses is 85 % and its accuracy is 91.98 %.A thermal imaging system has been proposed that is able to recognize abnormal breast tissue masses. This system utilizes fuzzy active contours to extract the abnormal regions automatically. PMID:28096784
Patterns of Activity in A Global Model of A Solar Active Region

NASA Technical Reports Server (NTRS)

Bradshaw, S. J.; Viall, N. M.

2016-01-01

In this work we investigate the global activity patterns predicted from a model active region heated by distributions of nanoflares that have a range of frequencies. What differs is the average frequency of the distributions. The activity patterns are manifested in time lag maps of narrow-band instrument channel pairs. We combine hydrodynamic and forward modeling codes with a magnetic field extrapolation to create a model active region and apply the time lag method to synthetic observations. Our aim is not to reproduce a particular set of observations in detail, but to recover some typical properties and patterns observed in active regions. Our key findings are the following. (1) Cooling dominates the time lag signature and the time lags between the channel pairs are generally consistent with observed values. (2) Shorter coronal loops in the core cool more quickly than longer loops at the periphery. (3) All channel pairs show zero time lag when the line of sight passes through coronal loop footpoints. (4) There is strong evidence that plasma must be re-energized on a timescale comparable to the cooling timescale to reproduce the observed coronal activity, but it is likely that a relatively broad spectrum of heating frequencies are operating across active regions. (5) Due to their highly dynamic nature, we find nanoflare trains produce zero time lags along entire flux tubes in our model active region that are seen between the same channel pairs in observed active regions.
Regional environmental change and human activity over the past hundred years recorded in the sedimentary record of Lake Qinghai, China.

PubMed

Sha, ZhanJiang; Wang, Qiugui; Wang, Jinlong; Du, Jinzhou; Hu, Jufang; Ma, Yujun; Kong, Fancui; Wang, Zhuan

2017-04-01

Environmental change and human activity can be recorded in sediment cores in aquatic systems such as lakes. Information from such records may be useful for environmental governance in the future. Six sediment cores were collected from Lake Qinghai, China and its sublakes during 2012 and 2013. Measurements of sediment grain-size fractions indicate that sedimentation in the north and southwest of Lake Qinghai is dominated by river input, whereas that in Lake Gahai and Lake Erhai is dominated by dunes. The sedimentation rates in Lake Qinghai were calculated to be 0.101-0.159 cm/y, similar to the rates in other lakes on the Qinghai-Tibetan Plateau. Using these data and sedimentation rates from the literature, we compiled the spatial distribution of sedimentation rates. Higher values were obtained in the three main areas of Lake Qinghai: two in river estuaries and one close to sand dunes. Lower values were measured in the center and south of the lake. Measurements of total organic carbon (TOC), total nitrogen (TN), phosphorus concentrations, and TOC/TN ratios in three cores (QH01, QH02, and Z04) revealed four horizons corresponding to times of increased human activity. These anthropogenic events were (1) the development of large areas of cropland in the Lake Qinghai watershed in 1960, (2) the beginning of nationwide fertilizer use and increases in cropland area in the lake watershed after 1970, (3) the implementation of the national program "Grain to Green," and (4) the rapid increase in the tourism industry from 2000. Profiles of Rb, Sr concentrations, the Rb/Sr ratio, and grain-size fraction in core Z04 indicate that the climate has become drier over the past 100 years. Therefore, we suggest that lake sediments such as those in Lake Qinghai are useful media for high-resolution studies of regional environmental change and human activity.
Neurobehavioral Mechanisms of Temporal Processing Deficits In Parkinson’s Disease

DTIC Science & Technology

2011-01-01

Foam padding was used to limit head motion. Auditory stimuli were delivered binaurally through a headphone that together with earplugs attenuated...core timer.’ Specifically, by the striatal beat frequency (SBF) model, Figure 5. Percent signal change in regions showing abnormal activation OFF
Special Advanced Course for Core Sciences to Bring Up Project Leaders

NASA Astrophysics Data System (ADS)

Inagaki, Kenji; Tabata, Nobuhisa; Gofuku, Akio; Harada, Isao; Takada, Jun

Special Advanced Course for Core Sciences has been introduced recently to Graduate School of Natural Science and Technology, Okayama University, to bring up a project leader. The following points are key education goals in this program : (1) knowledge of core sciences, (2) communication ability by using English, and (3) wide viewpoints for researches. In order to accomplish these goals, several lectures for core sciences, patent systems and engineering ethics as well as long term internships by the collaboration with some regional companies have been put in practice. In this paper, we describe the outline of the program, educational effects, and our experiences. Then, we discuss how effective the program is for bringing up an engineer or a scientist who can lead sciences and technologies of their domains. This paper also describes current activities of the program.
Crystal structure of p44, a constitutively active splice variant of visual arrestin.

PubMed

Granzin, Joachim; Cousin, Anneliese; Weirauch, Moritz; Schlesinger, Ramona; Büldt, Georg; Batra-Safferling, Renu

2012-03-09

Visual arrestin specifically binds to photoactivated and phosphorylated rhodopsin and inactivates phototransduction. In contrast, the p44 splice variant can terminate phototransduction by binding to nonphosphorylated light-activated rhodopsin. Here we report the crystal structure of bovine p44 at a resolution of 1.85 Å. Compared to native arrestin, the p44 structure reveals significant differences in regions crucial for receptor binding, namely flexible loop V-VI and polar core regions. Additionally, electrostatic potential is remarkably positive on the N-domain and the C-domain. The p44 structure represents an active conformation that serves as a model to explain the 'constitutive activity' found in arrestin variants. Copyright Â© 2012 Elsevier Ltd. All rights reserved.
Observations of hydrotectonic stress/strain events at a basement high at the Nicoya outer rise

NASA Astrophysics Data System (ADS)

Tryon, M. D.; Brown, K. M.

2005-12-01

There is substantial and growing evidence from heat flow and coring investigations that the oceanic plate off Costa Rica is highly hydrologically active and that this activity is responsible for one of the most anomalously cold thermal environments encountered in the oceanic environment. Recent work by Fisher, et al. has identified limited regions above certain topographic highs with extremely high heat flows. Pore water profiles from cores above these thinly sedimented basement highs suggest upward flow on the order of ~1 cm/yr. These highs may be the principal regions of out-flow from the basement in this region and, thus, can potentially be used to constrain the general level of hydrologic activity. The nine Chemical and Aqueous Transport (CAT) meters we deployed at one of the highest heatflow sites provide a temporal record of both in-flow and out-flow of aqueous fluids at rates as low as 0.1 mm/yr. Our objective was to provide a direct measurement of long term flow rates to address the following questions: (1) What are the characteristic fluid fluxes at basement highs of the low heat flow region of the northern Costa Rican incoming plate, and (2) is this flow temporally variable? The results of the instrument deployments agree quite closely in general with the coring results in that the background rates are on the order of 1 cm/yr or less. There is, however, considerable detail in the temporal records which suggest small scale tectonic stress transients causing temporary increases in flow rate. While this is certainly not an area of major tectonic activity, the site is located at the top of the outer rise where one would expect bending-related stress and fault reactivation to occur. The CAT meters are capable of detecting minute strain events in the underlying sediments and therefore may be detecting small localized strain events. Two periods of increased flow lasting a few weeks each occur during the 5 month deployment and are indicated on all of the instruments. A few indicate downflow while the others show upflow. This sort of response would be expected during a stress event causing regions of compression and dilation. These results suggest that ridge flank basement highs may be good sites to monitor stress/strain events as well as basement hydrology.
The activated sludge ecosystem contains a core community of abundant organisms

PubMed Central

Saunders, Aaron M; Albertsen, Mads; Vollertsen, Jes; Nielsen, Per H

2016-01-01

Understanding the microbial ecology of a system requires that the observed population dynamics can be linked to their metabolic functions. However, functional characterization is laborious and the choice of organisms should be prioritized to those that are frequently abundant (core) or transiently abundant, which are therefore putatively make the greatest contribution to carbon turnover in the system. We analyzed the microbial communities in 13 Danish wastewater treatment plants with nutrient removal in consecutive years and a single plant periodically over 6 years, using Illumina sequencing of 16S ribosomal RNA amplicons of the V4 region. The plants contained a core community of 63 abundant genus-level operational taxonomic units (OTUs) that made up 68% of the total reads. A core community consisting of abundant OTUs was also observed within the incoming wastewater to three plants. The net growth rate for individual OTUs was quantified using mass balance, and it was found that 10% of the total reads in the activated sludge were from slow or non-growing OTUs, and that their measured abundance was primarily because of immigration with the wastewater. Transiently abundant organisms were also identified. Among them the genus Nitrotoga (class Betaproteobacteria) was the most abundant putative nitrite oxidizer in a number of activated sludge plants, which challenges previous assumptions that Nitrospira (phylum Nitrospirae) are the primary nitrite-oxidizers in activated sludge systems with nutrient removal. PMID:26262816
In depth analysis of the mechanism of action of metal-dependent sigma factors: characterization of CorE2 from Myxococcus xanthus

PubMed Central

Marcos-Torres, Francisco Javier; Pérez, Juana; Gómez-Santos, Nuria; Moraleda-Muñoz, Aurelio; Muñoz-Dorado, José

2016-01-01

Extracytoplasmic function sigma factors represent the third pillar of signal-transduction mechanisms in bacteria. The variety of stimuli they recognize and mechanisms of action they use have allowed their classification into more than 50 groups. We have characterized CorE2 from Myxococcus xanthus, which belongs to group ECF44 and upregulates the expression of two genes when it is activated by cadmium and zinc. Sigma factors of this group contain a Cys-rich domain (CRD) at the C terminus which is essential for detecting metals. Point mutations at the six Cys residues of the CRD have revealed the contribution of each residue to CorE2 activity. Some of them are essential, while others are either dispensable or their mutations only slightly affect the activity of the protein. However, importantly, mutation of Cys174 completely shifts the specificity of CorE2 from cadmium to copper, indicating that the Cys arrangement of the CRD determines the metal specificity. Moreover, the conserved CxC motif located between the σ2 domain and the σ4.2 region has also been found to be essential for activity. The results presented here contribute to our understanding of the mechanism of action of metal-dependent sigma factors and help to define new common features of the members of this group of regulators. PMID:26951374
Understanding the Star Formation Process in the Filamentary Dark Cloud GF 9: Near-Infrared Observations

NASA Technical Reports Server (NTRS)

Ciardi, David R.; Woodward, Charles E.; Clemens, Dan P.; Harker, David E.; Rudy, Richard J.

1998-01-01

We have performed a near-infrared JHK survey of a dense core and a diffuse filament region within the filamentary dark cloud GF 9 (LDN 1082). The core region is associated with the IRAS point source PSC 20503+6006 and is suspected of being a site of star formation. The diffuse filament region has no associated IRAS point sources and is likely quiescent. We find that neither the core nor the filament region appears to contain a Class I or Class II young stellar object. As traced by the dust extinction, the core and filament regions contain 26 and 22 solar mass, respectively, with an average H2 volume density for both regions of approximately 2500/cu cm. The core region contains a centrally condensed extinction maximum with a peak extinction of A(sub v) greater than or approximately equal to 10 mag that appears to be associated with the IRAS point source. The average H2 volume density of the extinction core is approximately 8000/cu cm. The dust within the filament, however, shows no sign of a central condensation and is consistent with a uniform-density cylindrical distribution.
VLBI OBSERVATIONS OF THE JET IN M 87 DURING THE VERY HIGH ENERGY {gamma}-RAY FLARE IN 2010 APRIL

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hada, Kazuhiro; Giroletti, Marcello; Giovannini, Gabriele

2012-11-20

We report on the detailed radio status of the M 87 jet during the very high energy (VHE) {gamma}-ray flaring event in 2010 April, obtained from high-resolution, multi-frequency, phase-referencing Very Long Baseline Array observations. We especially focus on the properties of the jet base (the radio core) and the peculiar knot HST-1, which are currently favored as the {gamma}-ray emitting sites. During the VHE flaring event, the HST-1 region remains stable in terms of its structure and flux density in the optically thin regime above 2 GHz, being consistent with no signs of enhanced activities reported at X-ray for thismore » feature. The radio core shows an inverted spectrum at least up to 43 GHz during this event. Astrometry of the core position, which is specified as {approx}20 R {sub s} from the central engine in our previous study, shows that the core position is stable on a level of 4 R {sub s}. The core at 43 and 22 GHz tends to show slightly ({approx}10%) higher flux level near the date of the VHE flux peak compared with the epochs before/after the event. The size of the 43 GHz core is estimated to be {approx}17 R {sub s}, which is close to the size of the emitting region suggested from the observed timescale of rapid variability at VHE. These results tend to favor the scenario that the VHE {gamma}-ray flare in 2010 April is associated with the radio core.« less
Evidence for Multiple Mediator Complexes in Yeast Independently Recruited by Activated Heat Shock Factor

PubMed Central

Anandhakumar, Jayamani; Moustafa, Yara W.; Chowdhary, Surabhi; Kainth, Amoldeep S.

2016-01-01

Mediator is an evolutionarily conserved coactivator complex essential for RNA polymerase II transcription. Although it has been generally assumed that in Saccharomyces cerevisiae, Mediator is a stable trimodular complex, its structural state in vivo remains unclear. Using the “anchor away” (AA) technique to conditionally deplete select subunits within Mediator and its reversibly associated Cdk8 kinase module (CKM), we provide evidence that Mediator's tail module is highly dynamic and that a subcomplex consisting of Med2, Med3, and Med15 can be independently recruited to the regulatory regions of heat shock factor 1 (Hsf1)-activated genes. Fluorescence microscopy of a scaffold subunit (Med14)-anchored strain confirmed parallel cytoplasmic sequestration of core subunits located outside the tail triad. In addition, and contrary to current models, we provide evidence that Hsf1 can recruit the CKM independently of core Mediator and that core Mediator has a role in regulating postinitiation events. Collectively, our results suggest that yeast Mediator is not monolithic but potentially has a dynamic complexity heretofore unappreciated. Multiple species, including CKM-Mediator, the 21-subunit core complex, the Med2-Med3-Med15 tail triad, and the four-subunit CKM, can be independently recruited by activated Hsf1 to its target genes in AA strains. PMID:27185874
Uranium series isotopes concentration in sediments at San Marcos and Luis L. Leon reservoirs, Chihuahua, Mexico

NASA Astrophysics Data System (ADS)

Méndez-García, C.; Renteria-Villalobos, M.; García-Tenorio, R.; Montero-Cabrera, M. E.

2014-07-01

Spatial and temporal distribution of the radioisotopes concentrations were determined in sediments near the surface and core samples extracted from two reservoirs located in an arid region close to Chihuahua City, Mexico. At San Marcos reservoir one core was studied, while from Luis L. Leon reservoir one core from the entrance and another one close to the wall were investigated. 232Th-series, 238U-series, 40K and 137Cs activity concentrations (AC, Bq kg-1) were determined by gamma spectrometry with a high purity Ge detector. 238U and 234U ACs were obtained by liquid scintillation and alpha spectrometry with a surface barrier detector. Dating of core sediments was performed applying CRS method to 210Pb activities. Results were verified by 137Cs AC. Resulting activity concentrations were compared among corresponding surface and core sediments. High 238U-series AC values were found in sediments from San Marcos reservoir, because this site is located close to the Victorino uranium deposit. Low AC values found in Luis L. Leon reservoir suggest that the uranium present in the source of the Sacramento - Chuviscar Rivers is not transported up to the Conchos River. Activity ratios (AR) 234U/overflow="scroll">238U and 238U/overflow="scroll">226Ra in sediments have values between 0.9-1.2, showing a behavior close to radioactive equilibrium in the entire basin. 232Th/overflow="scroll">238U, 228Ra/overflow="scroll">226Ra ARs are witnesses of the different geological origin of sediments from San Marcos and Luis L. Leon reservoirs.
Regional brain activation/deactivation during word generation in schizophrenia: fMRI study.

PubMed

John, John P; Halahalli, Harsha N; Vasudev, Mandapati K; Jayakumar, Peruvumba N; Jain, Sanjeev

2011-03-01

Examination of the brain regions that show aberrant activations and/or deactivations during semantic word generation could pave the way for a better understanding of the neurobiology of cognitive dysfunction in schizophrenia. To examine the pattern of functional magnetic resonance imaging blood oxygen level dependent activations and deactivations during semantic word generation in schizophrenia. Functional magnetic resonance imaging was performed on 24 participants with schizophrenia and 24 matched healthy controls during an overt, paced, 'semantic category word generation' condition and a baseline 'word repetition' condition that modelled all the lead-in/associated processes involved in the performance of the generation task. The brain regions activated during word generation in healthy individuals were replicated with minimal redundancies in participants with schizophrenia. The individuals with schizophrenia showed additional activations of temporo-parieto-occipital cortical regions as well as subcortical regions, despite significantly poorer behavioural performance than the healthy participants. Importantly, the extensive deactivations in other brain regions during word generation in healthy individuals could not be replicated in those with schizophrenia. More widespread activations and deficient deactivations in the poorly performing participants with schizophrenia may reflect an inability to inhibit competing cognitive processes, which in turn could constitute the core information-processing deficit underlying impaired word generation in schizophrenia.
Probing the core of Cepheus A - Millimeter and submillimeter observations

NASA Astrophysics Data System (ADS)

Moriarty-Schieven, G. H.; Snell, R. L.; Hughes, V. A.

1991-06-01

Moderate and high angular resolution (40-7 arcsec) maps are presented of the core of the Cepheus A star-forming region using CS J = 3-2 and J = 7-6 emission, which traces the dense gas component of the cloud core, and using far-infrared (450 and 800 microns) continuum emission tracing the warm dust component. Three regimes in the core are traced by these observations: (1) a small (about 0.14 pc), nearly circular central core of high density (1-10 x 10 to the 6th/cu cm) and temperature (30-100 K) containing at least 25 percent of the mass and which contains the active early-type star formation; (2) an extended (0.5 x 0.25 pc), NE-SW oriented core of mass 200-300 solar masses, temperature 30-40 K, and average density nH2 of about 10 to the 5th/cu cm and which, together with the central core, contains 60-80 percent of the total core mass; and (3) an extended core envelope of dimensions 0.5 x 0.85 pc oriented primarily north-south, and a lower density. The velocity structure of the core suggests that it is being disrupted by the high-velocity winds driving the molecular outflow and is not due to a rotating circumstellar disk.

Application of individual foraminifera Mg/Ca and δ18O analyses for paleoceanographic reconstructions in the Bay of Bengal and other active depositional environments

NASA Astrophysics Data System (ADS)

Fritz-Endres, T.; Dekens, P.; Fehrenbacher, J. S.; Spero, H. J.; Stine, A.

2017-12-01

Paleoceanographic research traditionally focuses on regions where sediment deposition is minimally affected by transport. However, sediment fans near tectonically active regions provide an opportunity to link oceanographic climate to terrestrial processes. Sediment cores recovered during IODP Expedition 354 in the Bay of Bengal include hemipelagic sections that record the history of tectonic uplift and the development of the Indian Monsoon through the last 10 Ma. Although these cores provide a unique opportunity to link marine and terrestrial climate, the complex depositional environment requires that the source of foraminifera is carefully considered before using these proxies to reconstruct oceanographic conditions. Foraminifera in Bengal Fan sediments may have been transported via turbidity currents from the northern Bay of Bengal, where the seasonal variability of SST and SSS is larger compared to the southern Bay of Bengal. We measured single Globigerinoides sacculifer Mg/Ca and δ18O from mudline samples of IODP Site U1454 (8.4°N, 85.5°E, 3721 m water depth) near the modern active channel and Site U1449 (8.4°N, 88.7°E, 3653 m water depth) far from channel activity. We compare these sites to single G. sacculifer from the core-top sample of Site 342KL (20.6°N, 90.1°E, 1256 m water depth) located on the continental shelf. Each foraminifera lives 2-4 weeks and the distribution of 60 to 80 data points reflects the seasonal range of SST and SSS at the location where the foraminifera calcified. Measurements in foraminifera from Site U1449 (away from active channel) are statistically different from the site in the northern Bay of Bengal and more consistent with local conditions. Conversely, foraminifera from the site near the active channel reflect a combined signal of local conditions recorded from the site far from channel activity and those recorded from the continental shelf. This suggests a portion of foraminifera from the active channel site have been transported from the northern Bay of Bengal. Our data show that foraminifera can be used to reconstruct SST and δ18O in this complex depositional environment, but caution must be taken when the down-core lithology indicates turbidites and possible sediment transport
Computational design of variants for cephalosporin C acylase from Pseudomonas strain N176 with improved stability and activity.

PubMed

Tian, Ye; Huang, Xiaoqiang; Li, Qing; Zhu, Yushan

2017-01-01

In this report, redesigning cephalosporin C acylase from the Pseudomonas strain N176 revealed that the loss of stability owing to the introduced mutations at the active site can be recovered by repacking the nearby hydrophobic core regions. Starting from a quadruple mutant M31βF/H57βS/V68βA/H70βS, whose decrease in stability is largely owing to the mutation V68βA at the active site, we employed a computational enzyme design strategy that integrated design both at hydrophobic core regions for stability enhancement and at the active site for activity improvement. Single-point mutations L154βF, Y167βF, L180βF and their combinations L154βF/L180βF and L154βF/Y167βF/L180βF were found to display improved stability and activity. The two-point mutant L154βF/L180βF increased the protein melting temperature (T m ) by 11.7 °C and the catalytic efficiency V max /K m by 57 % compared with the values of the starting quadruple mutant. The catalytic efficiency of the resulting sixfold mutant M31βF/H57βS/V68βA/H70βS/L154βF/L180βF is recovered to become comparable to that of the triple mutant M31βF/H57βS/H70βS, but with a higher T m . Further experiments showed that single-point mutations L154βF, L180βF, and their combination contribute no stability enhancement to the triple mutant M31βF/H57βS/H70βS. These results verify that the lost stability because of mutation V68βA at the active site was recovered by introducing mutations L154βF and L180βF at hydrophobic core regions. Importantly, mutation V68βA in the six-residue mutant provides more space to accommodate the bulky side chain of cephalosporin C, which could help in designing cephalosporin C acylase mutants with higher activities and the practical one-step enzymatic route to prepare 7-aminocephalosporanic acid at industrial-scale levels.
THE ROLE OF THE MAGNETOROTATIONAL INSTABILITY IN MASSIVE STARS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wheeler, J. Craig; Kagan, Daniel; Chatzopoulos, Emmanouil, E-mail: wheel@astro.as.utexas.edu

2015-01-20

The magnetorotational instability (MRI) is key to physics in accretion disks and is widely considered to play some role in massive star core collapse. Models of rotating massive stars naturally develop very strong shear at composition boundaries, a necessary condition for MRI instability, and the MRI is subject to triply diffusive destabilizing effects in radiative regions. We have used the MESA stellar evolution code to compute magnetic effects due to the Spruit-Tayler (ST) mechanism and the MRI, separately and together, in a sample of massive star models. We find that the MRI can be active in the later stages ofmore » massive star evolution, leading to mixing effects that are not captured in models that neglect the MRI. The MRI and related magnetorotational effects can move models of given zero-age main sequence mass across ''boundaries'' from degenerate CO cores to degenerate O/Ne/Mg cores and from degenerate O/Ne/Mg cores to iron cores, thus affecting the final evolution and the physics of core collapse. The MRI acting alone can slow the rotation of the inner core in general agreement with the observed ''initial'' rotation rates of pulsars. The MRI analysis suggests that localized fields ∼10{sup 12} G may exist at the boundary of the iron core. With both the ST and MRI mechanisms active in the 20 M {sub ☉} model, we find that the helium shell mixes entirely out into the envelope. Enhanced mixing could yield a population of yellow or even blue supergiant supernova progenitors that would not be standard SN IIP.« less
fMRI evidence for strategic decision-making during resolution of pronoun reference.

PubMed

McMillan, Corey T; Clark, Robin; Gunawardena, Delani; Ryant, Neville; Grossman, Murray

2012-04-01

Pronouns are extraordinarily common in daily language yet little is known about the neural mechanisms that support decisions about pronoun reference. We propose a large-scale neural network for resolving pronoun reference that consists of two components. First, a core language network in peri-Sylvian cortex supports syntactic and semantic resources for interpreting pronoun meaning in sentences. Second, a frontal-parietal network that supports strategic decision-making is recruited to support probabilistic and risk-related components of resolving a pronoun's referent. In an fMRI study of healthy young adults, we observed activation of left inferior frontal and superior temporal cortex, consistent with a language network. We also observed activation of brain regions not associated with traditional language areas. By manipulating the context of the pronoun, we were able to demonstrate recruitment of dorsolateral prefrontal cortex during probabilistic evaluation of a pronoun's reference, and orbital frontal activation when a pronoun must adopt a risky referent. Together, these findings are consistent with a two-component model for resolving a pronoun's reference that includes neuroanatomic regions supporting core linguistic and decision-making mechanisms. Copyright © 2012 Elsevier Ltd. All rights reserved.
Development of visible light-responsive RNA scissors based on the 10-23 DNAzyme.

PubMed

Kamiya, Yukiko; Arimura, Yu; Ooi, Hideaki; Kato, Kenjiro; Liang, Xingguo; Asanuma, Hiroyuki

2018-04-22

10-23 DNAzyme is an artificially developed functional oligonucleotide, which can cleave RNA in a sequence-specific manner. In this study, we designed a new photo-driven DNAzyme possessing a photo-responsive DNA overhang complementary to the catalytic core region. The photo-responsive overhang region of the DNAzyme included either azobenzenes (Azos) or 2,6-dimethyl-4-(methylthio)azobenzenes (SDM-Azos) introduced via a D-threoninol linker. When the Azos or SDM-Azos were in the trans form, the photo-responsive DNA overhang hybridized with the DNAzyme, and the RNA cleavage activity was suppressed. Cis isomerization of Azos or SDM-Azos induced by 365 or 400 nm light, respectively, destabilized the duplex between the photo-responsive overhang and the catalytic core, and the DNAzyme recovered RNA cleavage activity. Reversible on and off of the DNAzyme activity was achieved by specific light irradiation. Further, light-dependent on and off of protein expression under the DNAzyme-containing condition was demonstrated. Thus, this photo-driven DNAzyme has potential for application in photo-controlled gene silencing system and a photo-activatable gene expression system. © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
A large-scale structure traced by [O II] emitters hosting a distant cluster at z= 1.62

NASA Astrophysics Data System (ADS)

Tadaki, Ken-ichi; Kodama, Tadayuki; Ota, Kazuaki; Hayashi, Masao; Koyama, Yusei; Papovich, Casey; Brodwin, Mark; Tanaka, Masayuki; Iye, Masanori

2012-07-01

We present a panoramic narrow-band imaging survey of [O II] emitters in and around the ClG J0218.3-0510 cluster at z= 1.62 with Suprime-Cam on Subaru Telescope. 352 [O II] emitters were identified on the basis of narrow-band excesses and photometric redshifts. We discovered a huge filamentary structure with some clumps traced by [O II] emitters and found that the ClG J0218.3-0510 cluster is embedded in an even larger superstructure than the one reported previously. 31 [O II] emitters were spectroscopically confirmed with the detection of Hα and/or [O III] emission lines by Fibre Multi Object Spectrograph observations. In the high-density regions such as cluster core and clumps, star-forming [O II] emitters show a high overdensity by a factor of more than 10 compared to the field region. Interestingly, the relative fraction of [O II] emitters in photo-z selected sample does not depend significantly on the local density. Although the star formation activity is very high even in the cluster core, some massive quiescent galaxies also exist at the same time. Furthermore, the properties of the individual [O II] emitters, such as star formation rates (SFRs), stellar masses and specific SFRs, do not show a significant dependence on the local density, either. Such a lack of environmental dependence is consistent with our earlier result by Hayashi et al. on a z= 1.5 cluster and its surrounding region. The fact that the star-forming activity of galaxies in the cluster core is as high as that in the field at z˜ 1.6 may suggest that the star-forming galaxies are probably just in a transition phase from a starburst mode to a quiescent mode, and are thus showing comparable level of star formation rates to those in lower density environments. We may be witnessing the start of the reversal of the local SFR-density relation due to the 'biased' galaxy formation and evolution in high-density regions at this high redshift, beyond which massive galaxies would be forming vigorously in a more biased way in protocluster cores.
Milky Way scattering properties and intrinsic sizes of active galactic nuclei cores probed by very long baseline interferometry surveys of compact extragalactic radio sources

NASA Astrophysics Data System (ADS)

Pushkarev, A. B.; Kovalev, Y. Y.

2015-10-01

We have measured the angular sizes of radio cores of active galactic nuclei (AGNs) and analysed their sky distributions and frequency dependences to study synchrotron opacity in AGN jets and the strength of angular broadening in the interstellar medium. We have used archival very long baseline interferometry (VLBI) data of more than 3000 compact extragalactic radio sources observed at frequencies, ν, from 2 to 43 GHz to measure the observed angular size of VLBI cores. We have found a significant increase in the angular sizes of the extragalactic sources seen through the Galactic plane (|b| ≲ 10°) at 2, 5 and 8 GHz, about one-third of which show significant scattering. These sources are mainly detected in directions to the Galactic bar, the Cygnus region and a region with galactic longitudes 220° ≲ l ≲ 260° (the Fitzgerald window). The strength of interstellar scattering of the AGNs is found to correlate with the Galactic Hα intensity, free-electron density and Galactic rotation measure. The dependence of scattering strengths on source redshift is insignificant, suggesting that the dominant scattering screens are located in our Galaxy. The observed angular size of Sgr A* is found to be the largest among thousands of AGNs observed over the sky; we discuss possible reasons for this strange result. Excluding extragalactic radio sources with significant scattering, we find that the angular size of opaque cores in AGNs scales typically as ν-1, confirming predictions of a conical synchrotron jet model with equipartition.
Residues in the membrane-spanning domain core modulate conformation and fusogenicity of the HIV-1 envelope glycoprotein

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shang Liang; Hunter, Eric, E-mail: eric.hunter2@emory.ed

2010-09-01

The membrane-spanning domain (MSD) of human immunodeficiency virus type I (HIV-1) envelope glycoprotein (Env) is critical for its biological activity. Initial studies have defined an almost invariant 'core' structure in the MSD and demonstrated that it is crucial for anchoring Env in the membrane and virus entry. We show here that amino acid substitutions in the MSD 'core' do not influence specific virus-cell attachment, nor CD4 receptor and CXCR4 coreceptor recognition by Env. However, substitutions within the MSD 'core' delayed the kinetics and reduced the efficiency of cell-cell fusion mediated by Env. Although we observed no evidence that membrane fusionmore » mediated by the MSD core mutants was arrested at a hemifusion stage, impaired Env fusogenicity was correlated with minor conformational changes in the V2, C1, and C5 regions in gp120 and the immunodominant loop in gp41. These changes could delay initiation of the conformational changes required in the fusion process.« less
Bottom Currents and Abyssal Sedimentation Processes South of Iceland.

DTIC Science & Technology

1980-06-01

infaunal burrowing activity are observed in various portions of the region. Discrete benthic organisms appear to -158- have adapted to various...cores (9 BC, 11 BC, and 12 BG; Figures 4.11, 4.12, 4.13). These may be due to gastropods whose shells are observed both in x-ray (Figure 4.12) and as...that the organisms present in the channel sediments are specifically adapted to live in regions in which episodic deposition and erosion may occur
RESOLVING THE GEOMETRY OF THE INNERMOST RELATIVISTIC JETS IN ACTIVE GALACTIC NUCLEI

DOE Office of Scientific and Technical Information (OSTI.GOV)

Algaba, J. C.; Lee, S. S.; Nakamura, M.

2017-01-01

In the current paradigm, it is believed that the compact VLBI radio core of radio-loud active galactic nuclei (AGNs) represents the innermost upstream regions of relativistic outflows. These regions of AGN jets have generally been modeled by a conical outflow with a roughly constant opening angle and flow speed. Nonetheless, some works suggest that a parabolic geometry would be more appropriate to fit the high energy spectral distribution properties and it has been recently found that, at least in some nearby radio galaxies, the geometry of the innermost regions of the jet is parabolic. We compile here multi-frequency core sizes of archivalmore » data to investigate the typically unresolved upstream regions of the jet geometry of a sample of 56 radio-loud AGNs. Data combined from the sources considered here are not consistent with the classic picture of a conical jet starting in the vicinity of the super-massive black hole (SMBH), and may exclude a pure parabolic outflow solution, but rather suggest an intermediate solution with quasi-parabolic streams, which are frequently seen in numerical simulations. Inspection of the large opening angles near the SMBH and the range of the Lorentz factors derived from our results support our analyses. Our result suggests that the conical jet paradigm in AGNs needs to be re-examined by millimeter/sub-millimeter VLBI observations.« less
The nucleotide composition of microbial genomes indicates differential patterns of selection on core and accessory genomes.

PubMed

Bohlin, Jon; Eldholm, Vegard; Pettersson, John H O; Brynildsrud, Ola; Snipen, Lars

2017-02-10

The core genome consists of genes shared by the vast majority of a species and is therefore assumed to have been subjected to substantially stronger purifying selection than the more mobile elements of the genome, also known as the accessory genome. Here we examine intragenic base composition differences in core genomes and corresponding accessory genomes in 36 species, represented by the genomes of 731 bacterial strains, to assess the impact of selective forces on base composition in microbes. We also explore, in turn, how these results compare with findings for whole genome intragenic regions. We found that GC content in coding regions is significantly higher in core genomes than accessory genomes and whole genomes. Likewise, GC content variation within coding regions was significantly lower in core genomes than in accessory genomes and whole genomes. Relative entropy in coding regions, measured as the difference between observed and expected trinucleotide frequencies estimated from mononucleotide frequencies, was significantly higher in the core genomes than in accessory and whole genomes. Relative entropy was positively associated with coding region GC content within the accessory genomes, but not within the corresponding coding regions of core or whole genomes. The higher intragenic GC content and relative entropy, as well as the lower GC content variation, observed in the core genomes is most likely associated with selective constraints. It is unclear whether the positive association between GC content and relative entropy in the more mobile accessory genomes constitutes signatures of selection or selective neutral processes.
Functional and structural correlates of magnetic resonance patterns in a new in vitro model of cerebral ischemia by transient occlusion of the medial cerebral artery.

PubMed

Breschi, Gian Luca; Librizzi, Laura; Pastori, Chiara; Zucca, Ileana; Mastropietro, Alfonso; Cattalini, Alessandro; de Curtis, Marco

2010-08-01

Magnetic resonance imaging (MRI) during the acute phase of a stroke contributes to recognize ischemic regions and is potentially useful to predict clinical outcome. Yet, the functional significance of early MRI alterations during brain ischemia is not clearly understood. We achieved an experimental study to interpret MRI signals in a novel model of focal ischemia in the in vitro isolated guinea pig brain. By combining neurophysiological and morphological analysis with MR-imaging, we evaluated the suitability of MR to identify ischemic and peri-ischemic regions. Extracellular recordings demonstrated depolarizations in the ischemic core, but not in adjacent areas, where evoked activity was preserved and brief peri-infarct depolarizations occurred. Diffusion-weighted MRI and immunostaining performed after neurophysiological characterization showed changes restricted to the core region. Diffusion-weighted MR alterations did not include the penumbra region characterized by peri-infarct depolarizations. Therefore, by comparing neurophysiological, imaging and anatomical data, we can conclude that DW-MRI underestimates the extension of the tissue damage involved in brain ischemia.
Secondary structure in solution of two anti-HIV-1 hammerhead ribozymes as investigated by two-dimensional 1H 500 MHz NMR spectroscopy in water

NASA Technical Reports Server (NTRS)

Sarma, R. H.; Sarma, M. H.; Rein, R.; Shibata, M.; Setlik, R. S.; Ornstein, R. L.; Kazim, A. L.; Cairo, A.; Tomasi, T. B.

1995-01-01

Two hammerhead chimeric RNA/DNA ribozymes (HRz) were synthesized in pure form. Both were 30 nucleotides long, and the sequences were such that they could be targeted to cleave the HIV-1 gag RNA. Named HRz-W and HRz-M, the former had its invariable core region conserved, the latter had a uridine in the invariable region replaced by a guanine. Their secodary structures were determined by 2D NOESY 1H 500 MHz NMR spectroscopy in 90% water and 10% D2(0), following the imino protons. The data show that both HRz-M and HRz-W form identical secondary structures with stem regions consisting of continuous stacks of AT and GT pairs. An energy minimized computer model of this stem region is provided. The results suggest that the loss of catalytic activity that is known to result when an invariant core residue is replaced is not related to the secondary structure of the ribozymes in the absence of substrate.
WASCAL - West African Science Service Center on Climate Change and Adapted Land Use Regional Climate Simulations and Land-Atmosphere Simulations for West Africa at DKRZ and elsewhere

NASA Astrophysics Data System (ADS)

Hamann, Ilse; Arnault, Joel; Bliefernicht, Jan; Klein, Cornelia; Heinzeller, Dominikus; Kunstmann, Harald

2014-05-01

Changing climate and hydro-meteorological boundary conditions are among the most severe challenges to Africa in the 21st century. In particular West Africa faces an urgent need to develop effective adaptation and mitigation strategies to cope with negative impacts on humans and environment due to climate change, increased hydro-meteorological variability and land use changes. To help meet these challenges, the German Federal Ministry of Education and Research (BMBF) started an initiative with institutions in Germany and West African countries to establish together a West African Science Service Center on Climate Change and Adapted Land Use (WASCAL). This activity is accompanied by an establishment of trans-boundary observation networks, an interdisciplinary core research program and graduate research programs on climate change and related issues for strengthening the analytical capabilities of the Science Service Center. A key research activity of the WASCAL Competence Center is the provision of regional climate simulations in a fine spatio-temporal resolution for the core research sites of WASCAL for the present and the near future. The climate information is needed for subsequent local climate impact studies in agriculture, water resources and further socio-economic sectors. The simulation experiments are performed using regional climate models such as COSMO-CLM, RegCM and WRF and statistical techniques for a further refinement of the projections. The core research sites of WASCAL are located in the Sudanian Savannah belt in Northern Ghana, Southern Burkina Faso and Northern Benin. The climate in this region is semi-arid with six rainy months. Due to the strong population growth in West Africa, many areas of the Sudanian Savannah have been already converted to farmland since the majority of the people are living directly or indirectly from the income produced in agriculture. The simulation experiments of the Competence Center and the Core Research Program are accompanied by the WASCAL Graduate Research Program on the West African Climate System. The GRP-WACS provides ten scholarships per year for West African PhD students with a duration of three years. Present and future WASCAL PhD students will constitute one important user group of the Linux cluster that will be installed at the Competence Center in Ouagadougou, Burkina Faso. Regional Land-Atmosphere Simulations A key research activity of the WASCAL Core Research Program is the analysis of interactions between the land surface and the atmosphere to investigate how land surface changes affect hydro-meteorological surface fluxes such as evapotranspiration. Since current land surface models of global and regional climate models neglect dominant lateral hydrological processes such as surface runoff, a novel land surface model is used, the NCAR Distributed Hydrological Modeling System (NDHMS). This model can be coupled to WRF (WRF-Hydro) to perform two-way coupled atmospheric-hydrological simulations for the watershed of interest. Hardware and network prerequisites include a HPC cluster, network switches, internal storage media, Internet connectivity of sufficient bandwidth. Competences needed are HPC, storage, and visualization systems optimized for climate research, parallelization and optimization of climate models and workflows, efficient management of highest data volumes.
WWER-1000 core and reflector parameters investigation in the LR-0 reactor

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zaritsky, S. M.; Alekseev, N. I.; Bolshagin, S. N.

2006-07-01

Measurements and calculations carried out in the core and reflector of WWER-1000 mock-up are discussed: - the determination of the pin-to-pin power distribution in the core by means of gamma-scanning of fuel pins and pin-to-pin calculations with Monte Carlo code MCU-REA and diffusion codes MOBY-DICK (with WIMS-D4 cell constants preparation) and RADAR - the fast neutron spectra measurements by proton recoil method inside the experimental channel in the core and inside the channel in the baffle, and corresponding calculations in P{sub 3}S{sub 8} approximation of discrete ordinates method with code DORT and BUGLE-96 library - the neutron spectra evaluations (adjustment)more » in the same channels in energy region 0.5 eV-18 MeV based on the activation and solid state track detectors measurements. (authors)« less
Human Promoters Are Intrinsically Directional

PubMed Central

Duttke, Sascha H.C.; Lacadie, Scott A.; Ibrahim, Mahmoud M.; Glass, Christopher K.; Corcoran, David L.; Benner, Christopher; Heinz, Sven; Kadonaga, James T.; Ohler, Uwe

2015-01-01

Divergent transcription, in which reverse-oriented transcripts occur upstream of eukaryotic promoters in regions devoid of annotated genes, has been suggested to be a general property of active promoters. Here we show that the human basal RNA polymerase II transcriptional machinery and core promoter are inherently unidirectional, and that reverse-oriented transcripts originate from their own cognate reverse-directed core promoters. In vitro transcription analysis and mapping of nascent transcripts in cells revealed that sequences at reverse start sites are similar to those of their forward counterparts. The use of DNase I accessibility to define proximal promoter borders revealed that up to half of promoters are unidirectional and that unidirectional promoters are depleted at their upstream edges of reverse core promoter sequences and their associated chromatin features. Divergent transcription is thus not an inherent property of the transcription process, but rather the consequence of the presence of both forward- and reverse-directed core promoters. PMID:25639469
Tail and Kinase Modules Differently Regulate Core Mediator Recruitment and Function In Vivo.

PubMed

Jeronimo, Célia; Langelier, Marie-France; Bataille, Alain R; Pascal, John M; Pugh, B Franklin; Robert, François

2016-11-03

Mediator is a highly conserved transcriptional coactivator organized into four modules, namely Tail, Middle, Head, and Kinase (CKM). Previous work suggests regulatory roles for Tail and CKM, but an integrated model for these activities is lacking. Here, we analyzed the genome-wide distribution of Mediator subunits in wild-type and mutant yeast cells in which RNA polymerase II promoter escape is blocked, allowing detection of transient Mediator forms. We found that although all modules are recruited to upstream activated regions (UAS), assembly of Mediator within the pre-initiation complex is accompanied by the release of CKM. Interestingly, our data show that CKM regulates Mediator-UAS interaction rather than Mediator-promoter association. In addition, although Tail is required for Mediator recruitment to UAS, Tailless Mediator nevertheless interacts with core promoters. Collectively, our data suggest that the essential function of Mediator is mediated by Head and Middle at core promoters, while Tail and CKM play regulatory roles. Copyright © 2016 Elsevier Inc. All rights reserved.
The unexpectedly large proportion of high-mass star-forming cores in a Galactic mini-starburst

NASA Astrophysics Data System (ADS)

Motte, F.; Nony, T.; Louvet, F.; Marsh, K. A.; Bontemps, S.; Whitworth, A. P.; Men'shchikov, A.; Nguyáën Luong, Q.; Csengeri, T.; Maury, A. J.; Gusdorf, A.; Chapillon, E.; Könyves, V.; Schilke, P.; Duarte-Cabral, A.; Didelon, P.; Gaudel, M.

2018-04-01

Understanding the processes that determine the stellar initial mass function (IMF) is a critical unsolved problem, with profound implications for many areas of astrophysics1. In molecular clouds, stars are formed in cores—gas condensations sufficiently dense that gravitational collapse converts a large fraction of their mass into a star or small clutch of stars. In nearby star-formation regions, the core mass function (CMF) is strikingly similar to the IMF, suggesting that the shape of the IMF may simply be inherited from the CMF2-5. Here, we present 1.3 mm observations, obtained with the Atacama Large Millimeter/submillimeter Array telescope, of the active star-formation region W43-MM1, which may be more representative of the Galactic-arm regions where most stars form6,7. The unprecedented resolution of these observations reveals a statistically robust CMF at high masses, with a slope that is markedly shallower than the IMF. This seriously challenges our understanding of the origin of the IMF.
The unexpectedly large proportion of high-mass star-forming cores in a Galactic mini-starburst

NASA Astrophysics Data System (ADS)

Motte, F.; Nony, T.; Louvet, F.; Marsh, K. A.; Bontemps, S.; Whitworth, A. P.; Men'shchikov, A.; Nguyen Luong, Q.; Csengeri, T.; Maury, A. J.; Gusdorf, A.; Chapillon, E.; Könyves, V.; Schilke, P.; Duarte-Cabral, A.; Didelon, P.; Gaudel, M.

2018-06-01

Understanding the processes that determine the stellar initial mass function (IMF) is a critical unsolved problem, with profound implications for many areas of astrophysics1. In molecular clouds, stars are formed in cores—gas condensations sufficiently dense that gravitational collapse converts a large fraction of their mass into a star or small clutch of stars. In nearby star-formation regions, the core mass function (CMF) is strikingly similar to the IMF, suggesting that the shape of the IMF may simply be inherited from the CMF2-5. Here, we present 1.3 mm observations, obtained with the Atacama Large Millimeter/submillimeter Array telescope, of the active star-formation region W43-MM1, which may be more representative of the Galactic-arm regions where most stars form6,7. The unprecedented resolution of these observations reveals a statistically robust CMF at high masses, with a slope that is markedly shallower than the IMF. This seriously challenges our understanding of the origin of the IMF.
Optimal self-cleavage activity of the hepatitis delta virus RNA is dependent on a homopurine base pair in the ribozyme core.

PubMed Central

Been, M D; Perrotta, A T

1995-01-01

A non-Watson-Crick G.G interaction within the core region of the hepatitis delta virus (HDV) antigenomic ribozyme is required for optimal rates of self-cleavage activity. Base substitutions for either one or both G's revealed that full activity was obtained only when both G's were replaced with A's. At those positions, substitutions that generate potential Watson-Crick, G.U, heteropurine, or homopyrimidine combinations resulted in dramatically lower cleavage activity. A homopurine symmetric base pair, of the same type identified in the high-affinity binding site of the HIV RRE, is most consistent with this data. Additional features shared between the antigenomic ribozyme and the Rev binding site in the vicinity of the homopurine pairs suggest some structural similarity for this region of the two RNAs and a possible motif associated with this homopurine interaction. Evidence for a homopurine pair at the equivalent position in a modified form of the HDV genomic ribozyme was also found. With the postulated symmetric pairing scheme, large distortions in the nucleotide conformation, the sugar-phosphate backbone, or both would be necessary to accommodate this interaction at the end of a helix; we hypothesize that this distortion is critical to the structure of the active site of the ribozyme and it is stabilized by the homopurine base pair. PMID:8595561

Differential Acetylation of Histone H3 at the Regulatory Region of OsDREB1b Promoter Facilitates Chromatin Remodelling and Transcription Activation during Cold Stress

PubMed Central

Roy, Dipan; Paul, Amit; Roy, Adrita; Ghosh, Ritesh; Ganguly, Payel; Chaudhuri, Shubho

2014-01-01

The rice ortholog of DREB1, OsDREB1b, is transcriptionally induced by cold stress and over-expression of OsDREB1b results in increase tolerance towards high salt and freezing stress. This spatio-temporal expression of OsDREB1b is preceded by the change in chromatin structure at the promoter and the upstream region for gene activation. The promoter and the upstream region of OsDREB1b genes appear to be arranged into a nucleosome array. Nucleosome mapping of ∼700bp upstream region of OsDREB1b shows two positioned nucleosomes between −610 to −258 and a weakly positioned nucleosome at the core promoter and the TSS. Upon cold stress, there is a significant change in the nucleosome arrangement at the upstream region with increase in DNaseI hypersensitivity or MNase digestion in the vicinity of cis elements and TATA box at the core promoter. ChIP assays shows hyper-acetylation of histone H3K9 throughout the locus whereas region specific increase was observed in H3K14ac and H3K27ac. Moreover, there is an enrichment of RNA PolII occupancy at the promoter region during transcription activation. There is no significant change in the H3 occupancy in OsDREB1b locus negating the possibility of nucleosome loss during cold stress. Interestingly, cold induced enhanced transcript level of OsDREB1b as well as histone H3 acetylation at the upstream region was found to diminish when stressed plants were returned to normal temperature. The result indicates absolute necessity of changes in chromatin conformation for the transcription up-regulation of OsDREB1b gene in response to cold stress. The combined results show the existence of closed chromatin conformation at the upstream and promoter region of OsDREB1b in the transcription “off” state. During cold stress, changes in region specific histone modification marks promote the alteration of chromatin structure to facilitate the binding of transcription machinery for proper gene expression. PMID:24940877
Complex molecules in Sagittarius B2(N): The importance of grain chemistry

NASA Technical Reports Server (NTRS)

Miao, Yanti; Mehringer, David M.; Kuan, Yi-Jheng; Snyder, Lewis E.

1995-01-01

The complex molecules vinyl cyanide (CH2CHCN), methyl formate (HCOOCH3), and ethyl cyanide (CH3CH2CN) were observed in the Sgr B2 star-forming region with the BIMA millimeter wavelength array. A region with diameter less than 0.1 pc toward the Sgr B2(N) molecular core is found to be the major source of these molecules. Also, this source is coincident with continuum emission from dust and a center of H2O maser activity. Ultracompact (UC) H 11 regions are located within 0.1 pc. Strikingly, none of these molecules is detected toward Sgr B2(M), a core located 1 minute south of Sgr B2(N). The existence of complex molecules, a large mass of dust, high-velocity H2O masers, and UC H 11 regions strongly suggests that the Sgr B2(N) region has just begun to form stars, while the absence of strong dust emission and large molecules suggests Sgr B2(M) is more evolved. The detection of large molecules coincident with continuum emission from dust supports the idea found in current chemical models that grain chemistry is of crucial importance for the formation of these molecules.
Cytotoxic T lymphocytes and CD4 epitope mutations in the pre-core/core region of hepatitis B virus in chronic hepatitis B carriers in Northeast Iran.

PubMed

Zhand, Sareh; Tabarraei, Alijan; Nazari, Amineh; Moradi, Abdolvahab

2017-07-01

Hepatitis B virus (HBV) is vulnerable to many various mutations. Those within epitopes recognized by sensitized T cells may influence the re-emergence of the virus. This study was designed to investigate the mutation in immune epitope regions of HBV pre-core/core among chronic HBV patients of Golestan province, Northeast Iran. In 120 chronic HBV carriers, HBV DNA was extracted from blood plasma samples and PCR was done using specific primers. Direct sequencing and alignment of the pre-core/core region were applied using reference sequence from Gene Bank database (Accession Number AB033559). The study showed 27 inferred amino acid substitutions, 9 of which (33.3%) were in CD4 and 2 (7.4%) in cytotoxic T lymphocytes' (CTL) epitopes and 16 other mutations (59.2%) were observed in other regions. CTL escape mutations were not commonly observed in pre-core/core sequences of chronic HBV carriers in the locale of study. It can be concluded that most of the inferred amino acid substitutions occur in different immune epitopes other than CTL and CD4.
Rice Cellulose SynthaseA8 Plant-Conserved Region Is a Coiled-Coil at the Catalytic Core Entrance1[OPEN

PubMed Central

Rushton, Phillip S.; Olek, Anna T.; Makowski, Lee; Badger, John

2017-01-01

The crystallographic structure of a rice (Oryza sativa) cellulose synthase, OsCesA8, plant-conserved region (P-CR), one of two unique domains in the catalytic domain of plant CesAs, was solved to 2.4 Å resolution. Two antiparallel α-helices form a coiled-coil domain linked by a large extended connector loop containing a conserved trio of aromatic residues. The P-CR structure was fit into a molecular envelope for the P-CR domain derived from small-angle X-ray scattering data. The P-CR structure and molecular envelope, combined with a homology-based chain trace of the CesA8 catalytic core, were modeled into a previously determined CesA8 small-angle X-ray scattering molecular envelope to produce a detailed topological model of the CesA8 catalytic domain. The predicted position for the P-CR domain from the molecular docking models places the P-CR connector loop into a hydrophobic pocket of the catalytic core, with the coiled-coil aligned near the entrance of the substrate UDP-glucose into the active site. In this configuration, the P-CR coiled-coil alone is unlikely to regulate substrate access to the active site, but it could interact with other domains of CesA, accessory proteins, or other CesA catalytic domains to control substrate delivery. PMID:27879387
Analysis of hepatitis C virus RNA dimerization and core-RNA interactions.

PubMed

Ivanyi-Nagy, Roland; Kanevsky, Igor; Gabus, Caroline; Lavergne, Jean-Pierre; Ficheux, Damien; Penin, François; Fossé, Philippe; Darlix, Jean-Luc

2006-01-01

The core protein of hepatitis C virus (HCV) has been shown previously to act as a potent nucleic acid chaperone in vitro, promoting the dimerization of the 3'-untranslated region (3'-UTR) of the HCV genomic RNA, a process probably mediated by a small, highly conserved palindromic RNA motif, named DLS (dimer linkage sequence) [G. Cristofari, R. Ivanyi-Nagy, C. Gabus, S. Boulant, J. P. Lavergne, F. Penin and J. L. Darlix (2004) Nucleic Acids Res., 32, 2623-2631]. To investigate in depth HCV RNA dimerization, we generated a series of point mutations in the DLS region. We find that both the plus-strand 3'-UTR and the complementary minus-strand RNA can dimerize in the presence of core protein, while mutations in the DLS (among them a single point mutation that abolished RNA replication in a HCV subgenomic replicon system) completely abrogate dimerization. Structural probing of plus- and minus-strand RNAs, in their monomeric and dimeric forms, indicate that the DLS is the major if not the sole determinant of UTR RNA dimerization. Furthermore, the N-terminal basic amino acid clusters of core protein were found to be sufficient to induce dimerization, suggesting that they retain full RNA chaperone activity. These findings may have important consequences for understanding the HCV replicative cycle and the genetic variability of the virus.
Structure of a BMI-1-Ring1B Polycomb Group Ubiquitin Ligase Complex

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li,Z.; Cao, R.; Wang, M.

2006-01-01

Polycomb group (PcG) proteins Bmi-1 and Ring1B are core subunits of the PRC1 complex which plays important roles in the regulation of Hox gene expression, X-chromosome inactivation, tumorigenesis and stem cell self-renewal. The RING finger protein Ring1B is an E3 ligase that participates in the ubiquitination of lysine 119 of histone H2A, and the binding of Bmi-1 stimulates the E3 ligase activity. We have mapped the regions of Bmi-1 and Ring1B required for efficient ubiquitin transfer and determined a 2.5 Angstroms structure of the Bmi-1-Ring1B core domain complex. The structure reveals that Ring1B 'hugs' Bmi-1 through extensive RING domain contactsmore » and its N-terminal tail wraps around Bmi-1. The two regions of interaction have a synergistic effect on the E3 ligase activity. Our analyses suggest a model where the Bmi-1-Ring1B complex stabilizes the interaction between the E2 enzyme and the nucleosomal substrate to allow efficient ubiquitin transfer.« less
Geochemical behavior, environmental availability, and reconstruction of historical trends of Cu, Pb, and Zn in sediment cores of the Cananéia-Iguape coastal system, Southeastern Brazil.

PubMed

Tramonte, Keila Modesto; Figueira, Rubens Cesar Lopes; Majer, Alessandra Pereira; de Lima Ferreira, Paulo Alves; Batista, Miriam Fernanda; Ribeiro, Andreza Portella; de Mahiques, Michel Michaelovitch

2018-02-01

The Cananéia-Iguape system is located in a coastal region of southeastern Brazil, recognized by UNESCO as an Atlantic Forest Biosphere Reserve. This system has suffered substantial environmental impacts due to the opening of an artificial channel and by past intensive mining activities. In this paper was performed the sequential chemical extraction of Cu, Pb, and Zn, on previously described sediment cores, and the statistical treatment of the data, allowing to estimate the remobilization geochemical behavior, the available content and the trend of accumulation between 1926 and 2008. The maximum available level (sum of all mobile fraction) were, in mgkg -1 , 18.74 for Cu, 177.55 for Pb and 123.03 for Zn. Considering its environmental availability, Pb remains a concern in the system. It was possible to recognize the anthropic contribution of Pb, being the mining activities considered the only potential source of this metal in the region. Copyright © 2017 Elsevier Ltd. All rights reserved.
Synonymous Mutations in the Core Gene Are Linked to Unusual Serological Profile in Hepatitis C Virus Infection

PubMed Central

Budkowska, Agata; Kakkanas, Athanassios; Nerrienet, Eric; Kalinina, Olga; Maillard, Patrick; Horm, Srey Viseth; Dalagiorgou, Geena; Vassilaki, Niki; Georgopoulou, Urania; Martinot, Michelle; Sall, Amadou Alpha; Mavromara, Penelope

2011-01-01

The biological role of the protein encoded by the alternative open reading frame (core+1/ARF) of the Hepatitis C virus (HCV) genome remains elusive, as does the significance of the production of corresponding antibodies in HCV infection. We investigated the prevalence of anti-core and anti-core+1/ARFP antibodies in HCV-positive blood donors from Cambodia, using peptide and recombinant protein-based ELISAs. We detected unusual serological profiles in 3 out of 58 HCV positive plasma of genotype 1a. These patients were negative for anti-core antibodies by commercial and peptide-based assays using C-terminal fragments of core but reacted by Western Blot with full-length core protein. All three patients had high levels of anti-core+1/ARFP antibodies. Cloning of the cDNA that corresponds to the core-coding region from these sera resulted in the expression of both core and core+1/ARFP in mammalian cells. The core protein exhibited high amino-acid homology with a consensus HCV1a sequence. However, 10 identical synonymous mutations were found, and 7 were located in the aa(99–124) region of core. All mutations concerned the third base of a codon, and 5/10 represented a T>C mutation. Prediction analyses of the RNA secondary structure revealed conformational changes within the stem-loop region that contains the core+1/ARFP internal AUG initiator at position 85/87. Using the luciferase tagging approach, we showed that core+1/ARFP expression is more efficient from such a sequence than from the prototype HCV1a RNA. We provide additional evidence of the existence of core+1/ARFP in vivo and new data concerning expression of HCV core protein. We show that HCV patients who do not produce normal anti-core antibodies have unusually high levels of antit-core+1/ARFP and harbour several identical synonymous mutations in the core and core+1/ARFP coding region that result in major changes in predicted RNA structure. Such HCV variants may favour core+1/ARFP production during HCV infection. PMID:21283512
Active Region Moss: Doppler Shifts from Hinode/EIS Observations

NASA Technical Reports Server (NTRS)

Tripathi, Durgesh; Mason, Helen E.; Klimchuk, James A.

2012-01-01

Studying the Doppler shifts and the temperature dependence of Doppler shifts in moss regions can help us understand the heating processes in the core of the active regions. In this paper we have used an active region observation recorded by the Extreme-ultraviolet Imaging Spectrometer (EIS) onboard Hinode on 12-Dec- 2007 to measure the Doppler shifts in the moss regions. We have distinguished the moss regions from the rest of the active region by defining a low density cut-off as derived by Tripathi et al. (2010). We have carried out a very careful analysis of the EIS wavelength calibration based on the method described in Young, O Dwyer and Mason (2012). For spectral lines having maximum sensitivity between log T = 5.85 and log T = 6.25 K, we find that the velocity distribution peaks at around 0 km/s with an estimated error of 4 km/s. The width of the distribution decreases with temperature. The mean of the distribution shows a blue shift which increases with increasing temperature and the distribution also shows asymmetries towards blue-shift. Comparing these results with observables predicted from different coronal heating models, we find that these results are consistent with both steady and impulsive heating scenarios. Further observational constraints are needed to distinguish between these two heating scenarios.
Correlation between core ion energization, suprathermal electron bursts, and broadband ELF plasma waves

NASA Astrophysics Data System (ADS)

Knudsen, David J.; Clemmons, James H.; Wahlund, Jan-Erik

1998-03-01

Observations of the lowest energy or core ions provide a particularly sensitive measure of the early stages of auroral ion energization. Freja satellite observations of 0-20 eV core ions in the topside auroral ionosphere and cusp/cleft show signs of heating within both regions of VLF hiss and broadband ELF plasma waves. However, heating to several eV or more is associated predominantly with the ELF waves. A correlation analysis of wave and core ion data formed from orbital segments shows that, on average, correlations are highest for wave frequencies below several hundred Hz, and less at VLF hiss frequencies. A similar analysis shows a higher correlation between electron precipitation and ion heating for electron energies below several hundred eV (i.e., the energies associated with suprathermal electron bursts) and a lower correlation above the 1 keV energies associated with auroral inverted-V's. Signs of core ion heating begin to appear when wave power at the O+ gyrofrequency exceeds about 10-3(mVm-1)2/Hz, and when the integrated field-aligned electron flux exceeds a few times 107cm-2s-1sr-1. This electron energy flux threshold is at least an order of magnitude lower than previously inferred from earlier studies comparing suprathermal electron fluxes and energetic ions. Almost all observed heating events occur during enhanced or active geomagnetic conditions; i.e., Kp>=4. While the most intense core ion heating is correlated with broadband ELF waves, we also present one example of weak ion heating of a few eV in a region of VLF auroral hiss.
Large-scale and Long-duration Simulation of a Multi-stage Eruptive Solar Event

NASA Astrophysics Data System (ADS)

Jiang, chaowei; Hu, Qiang; Wu, S. T.

2015-04-01

We employ a data-driven 3D MHD active region evolution model by using the Conservation Element and Solution Element (CESE) numerical method. This newly developed model retains the full MHD effects, allowing time-dependent boundary conditions and time evolution studies. The time-dependent simulation is driven by measured vector magnetograms and the method of MHD characteristics on the bottom boundary. We have applied the model to investigate the coronal magnetic field evolution of AR11283 which was characterized by a pre-existing sigmoid structure in the core region and multiple eruptions, both in relatively small and large scales. We have succeeded in producing the core magnetic field structure and the subsequent eruptions of flux-rope structures (see https://dl.dropboxusercontent.com/u/96898685/large.mp4 for an animation) as the measured vector magnetograms on the bottom boundary evolve in time with constant flux emergence. The whole process, lasting for about an hour in real time, compares well with the corresponding SDO/AIA and coronagraph imaging observations. From these results, we show the capability of the model, largely data-driven, that is able to simulate complex, topological, and highly dynamic active region evolutions. (We acknowledge partial support of NSF grants AGS 1153323 and AGS 1062050, and data support from SDO/HMI and AIA teams).
The impact of a pressurized regional sea or global ocean on stresses on Enceladus

NASA Astrophysics Data System (ADS)

Johnston, Stephanie A.; Montési, Laurent G. J.

2017-06-01

Liquid water is likely present in the interior of Enceladus, but it is still debated whether this water forms a global ocean or a regional sea and whether the present-day situation is stable. As the heat flux of Enceladus exceeds most heat source estimates, the liquid water is likely cooling and crystallizing, which results in expansion and pressurization of the sea or ocean. We determine, using an axisymmetric Finite Element Model, the tectonic patterns that pressurization of a regional sea or global ocean might produce at the surface of Enceladus. Tension is always predicted above where the ice is thinnest and generates cracks that might be at the origin of the Tiger Stripes. Tectonic activity is also expected in an annulus around the sea if the ice shell is in contact with but slips freely along the rocky core of the satellite. Cracks at the north pole are expected if the shell slips along the core or if there is a global ocean with thin ice at the pole. Water is likely injected along the base of the ice when the shell is grounded, which may lead to cycles of tectonic activity with the shell alternating between floating and grounded states and midlatitude faulting occurring at the transition from a grounded to a floating state.
Uranium series isotopes concentration in sediments at San Marcos and Luis L. Leon reservoirs, Chihuahua, Mexico

DOE Office of Scientific and Technical Information (OSTI.GOV)

Méndez-García, C.; Montero-Cabrera, M. E., E-mail: elena.montero@cimav.edu.mx; Renteria-Villalobos, M.

2008-01-01

Spatial and temporal distribution of the radioisotopes concentrations were determined in sediments near the surface and core samples extracted from two reservoirs located in an arid region close to Chihuahua City, Mexico. At San Marcos reservoir one core was studied, while from Luis L. Leon reservoir one core from the entrance and another one close to the wall were investigated. ²³²Th-series, ²³⁸U-series, ⁴⁰K and ¹³⁷Cs activity concentrations (AC, Bq kg⁻¹) were determined by gamma spectrometry with a high purity Ge detector. ²³⁸U and ²³⁴U ACs were obtained by liquid scintillation and alpha spectrometry with a surface barrier detector. Dating ofmore » core sediments was performed applying CRS method to ²¹⁰Pb activities. Results were verified by ¹³⁷Cs AC. Resulting activity concentrations were compared among corresponding surface and core sediments. High ²³⁸U-series AC values were found in sediments from San Marcos reservoir, because this site is located close to the Victorino uranium deposit. Low AC values found in Luis L. Leon reservoir suggest that the uranium present in the source of the Sacramento – Chuviscar Rivers is not transported up to the Conchos River. Activity ratios (AR) ²³⁴U/²³⁸U and ²³⁸U/²²⁶Ra in sediments have values between 0.9–1.2, showing a behavior close to radioactive equilibrium in the entire basin. ²³²Th/²³⁸U, ²²⁸Ra/²²⁶Ra ARs are witnesses of the different geological origin of sediments from San Marcos and Luis L. Leon reservoirs.« less
Astrocyte activation and wound healing in intact-skull mouse after focal brain injury.

PubMed

Suzuki, Takayuki; Sakata, Honami; Kato, Chiaki; Connor, John A; Morita, Mitsuhiro

2012-12-01

Localised brain tissue damage activates surrounding astrocytes, which significantly influences subsequent long-term pathological processes. Most existing focal brain injury models in rodents employ craniotomy to localise mechanical insults. However, the craniotomy procedure itself induces gliosis. To investigate perilesional astrocyte activation under conditions in which the skull is intact, we created focal brain injuries using light exposure through a cranial window made by thinning the skull without inducing gliosis. The lesion size was maximal at ~ 12 h and showed substantial recovery over the subsequent 30 days. Two distinct types of perilesional reactive astrocyte, identified by GFAP upregulation and hypertrophy, were found. In proximal regions the reactive astrocytes proliferated and expressed nestin, whereas in regions distal to the injury core the astrocytes showed increased GFAP expression but did not proliferate, lacked nestin expression, and displayed different morphology. Simply making the window did not induce any of these changes. There were also significant numbers of neurons in the recovering cortical tissue. In the recovery region, reactive astrocytes radially extended processes which appeared to influence the shapes of neuronal nuclei. The proximal reactive astrocytes also formed a cell layer which appeared to serve as a protective barrier, blocking the spread of IgG deposition and migration of microglia from the lesion core to surrounding tissue. The recovery was preceded by perilesional accumulation of leukocytes expressing vascular endothelial growth factor. These results suggest that, under intact skull conditions, focal brain injury is followed by perilesional reactive astrocyte activities that foster cortical tissue protection and recovery. © 2012 Federation of European Neuroscience Societies and Blackwell Publishing Ltd.
Three Dimensional Structure and Time Development of Radio Emission from Solar Active Regions.

DTIC Science & Technology

1983-01-15

8217 surrounded by a weaker unpolarized halo whose angular extent ranges between 5’ and 9’. The bright (106K) sunspot-associated cores, which were intepreted in...shorter intervals. Examination of the He film indicates that the dominant He emission was stable for periods of at least six hours. Figure 8 and 9 also...the cool loops and may occupy a substantial fraction of the region above sunspots. This intepretation has, in fact, been supported by the model of
Guided-wave photodiode using through-absorber quantum-well-intermixing and methods thereof

DOEpatents

Skogen, Erik J.

2016-10-25

The present invention includes a high-speed, high-saturation power detector (e.g., a photodiode) compatible with a relatively simple monolithic integration process. In particular embodiments, the photodiode includes an intrinsic bulk absorption region, which is grown above a main waveguide core including a number of quantum wells (QWs) that are used as the active region of a phase modulator. The invention also includes methods of fabricating integrated photodiode and waveguide assemblies using a monolithic, simplified process.
Individual differences in symptom severity and behavior predict neural activation during face processing in adolescents with autism

PubMed Central

Scherf, K. Suzanne; Elbich, Daniel; Minshew, Nancy; Behrmann, Marlene

2014-01-01

Despite the impressive literature describing atypical neural activation in visuoperceptual face processing regions in autism, almost nothing is known about whether these perturbations extend to more affective regions in the circuitry and whether they bear any relationship to symptom severity or atypical behavior. Using fMRI, we compared face-, object-, and house-related activation in adolescent males with high-functioning autism (HFA) and typically developing (TD) matched controls. HFA adolescents exhibited hypo-activation throughout the core visuoperceptual regions, particularly in the right hemisphere, as well as in some of the affective/motivational face-processing regions, including the posterior cingulate cortex and right anterior temporal lobe. Conclusions about the relative hyper- or hypo-activation of the amygdala depended on the nature of the contrast that was used to define the activation. Individual differences in symptom severity predicted the magnitude of face activation, particularly in the right fusiform gyrus. Also, among the HFA adolescents, face recognition performance predicted the magnitude of face activation in the right anterior temporal lobe, a region that supports face individuation in TD adults. Our findings reveal a systematic relation between the magnitude of neural dysfunction, severity of autism symptoms, and variation in face recognition behavior in adolescents with autism. In so doing, we uncover brain–behavior relations that underlie one of the most prominent social deficits in autism and help resolve discrepancies in the literature. PMID:25610767
High-Throughput Genetic Identification of Functionally Important Regions of the Yeast DEAD-Box Protein Mss116p

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mohr, Georg; Del Campo, Mark; Turner, Kathryn G.

The Saccharomyces cerevisiae DEAD-box protein Mss116p is a general RNA chaperone that functions in splicing mitochondrial group I and group II introns. Recent X-ray crystal structures of Mss116p in complex with ATP analogs and single-stranded RNA show that the helicase core induces a bend in the bound RNA, as in other DEAD-box proteins, while a C-terminal extension (CTE) induces a second bend, resulting in RNA crimping. Here, we illuminate these structures by using high-throughput genetic selections, unigenic evolution, and analyses of in vivo splicing activity to comprehensively identify functionally important regions and permissible amino acid substitutions throughout Mss116p. The functionallymore » important regions include those containing conserved sequence motifs involved in ATP and RNA binding or interdomain interactions, as well as previously unidentified regions, including surface loops that may function in protein-protein interactions. The genetic selections recapitulate major features of the conserved helicase motifs seen in other DEAD-box proteins but also show surprising variations, including multiple novel variants of motif III (SAT). Patterns of amino acid substitutions indicate that the RNA bend induced by the helicase core depends on ionic and hydrogen-bonding interactions with the bound RNA; identify a subset of critically interacting residues; and indicate that the bend induced by the CTE results primarily from a steric block. Finally, we identified two conserved regions - one the previously noted post II region in the helicase core and the other in the CTE - that may help displace or sequester the opposite RNA strand during RNA unwinding.« less
CORAL: aligning conserved core regions across domain families.

PubMed

Fong, Jessica H; Marchler-Bauer, Aron

2009-08-01

Homologous protein families share highly conserved sequence and structure regions that are frequent targets for comparative analysis of related proteins and families. Many protein families, such as the curated domain families in the Conserved Domain Database (CDD), exhibit similar structural cores. To improve accuracy in aligning such protein families, we propose a profile-profile method CORAL that aligns individual core regions as gap-free units. CORAL computes optimal local alignment of two profiles with heuristics to preserve continuity within core regions. We benchmarked its performance on curated domains in CDD, which have pre-defined core regions, against COMPASS, HHalign and PSI-BLAST, using structure superpositions and comprehensive curator-optimized alignments as standards of truth. CORAL improves alignment accuracy on core regions over general profile methods, returning a balanced score of 0.57 for over 80% of all domain families in CDD, compared with the highest balanced score of 0.45 from other methods. Further, CORAL provides E-values to aid in detecting homologous protein families and, by respecting block boundaries, produces alignments with improved 'readability' that facilitate manual refinement. CORAL will be included in future versions of the NCBI Cn3D/CDTree software, which can be downloaded at http://www.ncbi.nlm.nih.gov/Structure/cdtree/cdtree.shtml. Supplementary data are available at Bioinformatics online.
Reconstructing historical atmospheric mercury deposition in Western Europe using: Misten peat bog cores, Belgium.

PubMed

Allan, Mohammed; Le Roux, Gael; Sonke, Jeroen E; Piotrowska, Natalia; Streel, Maurice; Fagel, Nathalie

2013-01-01

Four sediment cores were collected in 2008 from the Misten ombrotrophic peat bog in the Northern part of the Hautes Fagnes Plateau in Belgium. Total mercury (Hg) concentrations were analyzed to investigate the intra-site variability in atmospheric Hg deposition over the past 1,500 years. Mercury concentrations in the four cores ranged from 16 to 1,100 μg kg(-1), with the maxima between 840 and 1,100 μg kg(-1). A chronological framework was established using radiometric (210)Pb and (14)C dating of two cores (M1 and M4). Pollen horizons from these two cores were correlated with data from two additional cores, providing a consistent dating framework between all the sites. There was good agreement between atmospheric Hg accumulation rates in the four cores over time based on precise age dating and pollen chronosequences. The average Hg accumulation rate before the influence of human activities (from 500 to 1,300 AD) was 1.8 ± 1 μg m(-2)y(-1) (2SD). Maximum Hg accumulation rates ranged from 90 to 200 μg m(-2)y(-1) between 1930 and 1980 AD. During the European-North American Industrial Revolution, the mean Hg accumulation rate exceeded the pre-Industrial values by a factor of 63. Based on comparisons with historical records of anthropogenic activities in Europe and Belgium, the predominant regional anthropogenic sources of Hg during and after the Industrial Revolution were coal burning and smelter Hg emissions. Mercury accumulation rates and chronologies in the Misten cores were consistent with those reported for other European peat records. Copyright © 2012 Elsevier B.V. All rights reserved.

Evidence for Multiple Mediator Complexes in Yeast Independently Recruited by Activated Heat Shock Factor.

PubMed

Anandhakumar, Jayamani; Moustafa, Yara W; Chowdhary, Surabhi; Kainth, Amoldeep S; Gross, David S

2016-07-15

Mediator is an evolutionarily conserved coactivator complex essential for RNA polymerase II transcription. Although it has been generally assumed that in Saccharomyces cerevisiae, Mediator is a stable trimodular complex, its structural state in vivo remains unclear. Using the "anchor away" (AA) technique to conditionally deplete select subunits within Mediator and its reversibly associated Cdk8 kinase module (CKM), we provide evidence that Mediator's tail module is highly dynamic and that a subcomplex consisting of Med2, Med3, and Med15 can be independently recruited to the regulatory regions of heat shock factor 1 (Hsf1)-activated genes. Fluorescence microscopy of a scaffold subunit (Med14)-anchored strain confirmed parallel cytoplasmic sequestration of core subunits located outside the tail triad. In addition, and contrary to current models, we provide evidence that Hsf1 can recruit the CKM independently of core Mediator and that core Mediator has a role in regulating postinitiation events. Collectively, our results suggest that yeast Mediator is not monolithic but potentially has a dynamic complexity heretofore unappreciated. Multiple species, including CKM-Mediator, the 21-subunit core complex, the Med2-Med3-Med15 tail triad, and the four-subunit CKM, can be independently recruited by activated Hsf1 to its target genes in AA strains. Copyright © 2016, American Society for Microbiology. All Rights Reserved.
PNNL Researchers Collect Permafrost Cores in Alaska

DOE Office of Scientific and Technical Information (OSTI.GOV)

None

2016-11-23

Permafrost is ground that is frozen for two or more years. In the Arctic, discontinuous regions of this saturated admixture of soil and rock store a large fraction of the Earth’s carbon – about 1672 petagrams (1672 trillion kilograms). As temperatures increase in the Northern Hemisphere, a lot of that carbon may be released to the atmosphere, making permafrost an important factor to represent accurately in global climate models. At Pacific Northwest National Laboratory, a group led by James C. Stegen periodically extracts permafrost core samples from a site near Fairbanks, Alaska. Back at the lab in southeastern Washington State,more » they study the cores for levels of microbial activity, carbon fluxes, hydrologic patterns, and other factors that reveal the dynamics of this consequential layer of soil and rock.« less
Numerical modeling of coupled nitrification-denitrification in sediment perfusion cores from the hyporheic zone of the Shingobee River, MN

USGS Publications Warehouse

Sheibley, R.W.; Jackman, A.P.; Duff, J.H.; Triska, F.J.

2003-01-01

Nitrification and denitrification kinetics in sediment perfusion cores were numerically modeled and compared to experiments on cores from the Shingobee River MN, USA. The experimental design incorporated mixing groundwater discharge with stream water penetration into the cores, which provided a well-defined, one-dimensional simulation of in situ hydrologic conditions. Ammonium (NH+4) and nitrate (NO-3) concentration gradients suggested the upper region of the cores supported coupled nitrification-denitrification, where groundwater-derived NH+4 was first oxidized to NO-3 then subsequently reduced via denitrification to N2. Nitrification and denitrification were modeled using a Crank-Nicolson finite difference approximation to a one-dimensional advection-dispersion equation. Both processes were modeled using first-order reaction kinetics because substrate concentrations (NH+4 and NO-3) were much smaller than published Michaelis constants. Rate coefficients for nitrification and denitrification ranged from 0.2 to 15.8 h-1 and 0.02 to 8.0 h-1, respectively. The rate constants followed an Arrhenius relationship between 7.5 and 22 ??C. Activation energies for nitrification and denitrification were 162 and 97.3 kJ/mol, respectively. Seasonal NH+4 concentration patterns in the Shingobee River were accurately simulated from the relationship between perfusion core temperature and NH+4 flux to the overlying water. The simulations suggest that NH+4 in groundwater discharge is controlled by sediment nitrification that, consistent with its activation energy, is strongly temperature dependent. ?? 2003 Elsevier Ltd. All rights reserved.
In-situ verification techniques for fast critical assembly cores

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brumbach, S.B.; Amundson, P.I.; Roche, C.T.

1979-01-01

Active and passive autoradiographic techniques were used to obtain piece counts of fuel plates in fast critical assembly drawers and to verify the assembly loading pattern. Active autoradiography using prompt-fission and fission-product radiation was more successful with uranium fuel while passive autoradiography was more successful with plutonium fuel. A source multiplication technique was used to measure changes in reactivity when small quantities (2-2.5 kg) of fissile material were removed from a subcritical reference core of the Zero Power Plutonium Reactor. Efforts to compensate for unsuccessful. Some compensation was achieved by replacing U-238 with polyethylene. The sensitivity for detection of partiallymore » compensated fuel removed from minimum worth regions was approximately 2.5 kg (fissile) for a core containing 2600 kg (fissile). Substitution of polyethylene was detected with a spectral index which was the ratio of the rate of the In-115 (n,..gamma..) reaction to the rate of the In-115 (n,n') reaction. This spectral index was sensitive to the presence of an 0.64-cm-thick, 5.08-cm-high polyethylene column 10-15 cm away from the indium foil. The reactivity worth of Pu-239 was also obtained as a function of location in the reactor core with the use of an inverse kinetics technique. Reactivity worths for Pu-239 varied from a maximum of 58.67 Ih/kg near the core center to a minimum of 14.86 Ih/kg at the core edge.« less
Functional Characterization of the Putative Hepatitis B Virus Core Protein Late Domain Using Retrovirus Chimeras

PubMed Central

Garcia, Mayra L.; Reynolds, Tracy D.; Mothes, Walther; Robek, Michael D.

2013-01-01

The hepatitis B virus (HBV) Core protein encodes a late (L)-domain like motif (129PPAYRPPNAP138) that has been purported to serve as a docking site for recruitment of host factors such as Nedd4 that can mediate viral particle release from infected cells. However, mutation of this region of Core typically disrupts nucleocapsid formation in the cytoplasm, making it difficult to ascertain if the Core PPAY motif constitutes a functional L-domain that mediates HBV release in the context of replicating virus. Since many viral L-domains are functionally interchangeable between different virus families, and such swapping experiments have been used as a tool to identify other viral sequences with L-domain activity, we generated chimeric constructs between murine leukemia virus (MLV) Gag and HBV Core to determine if the potential HBV L-domain motif is sufficient to stimulate virus release. We found that the HBV Core PPAY motif, but not the PNAP motif, demonstrates L-domain activity in the context of MLV replication to direct virus release and infectious virion production. Additionally, we found that overexpression of the cellular Nedd4 or WWP1 ubiquitin ligases stimulates release of a partially defective PPAY domain mutant, providing further evidence supporting a role for the Nedd4 ubiquitin ligase in promoting HBV release. These studies lend further insight into the mechanisms used by HBV to mediate its release from infected cells. PMID:24009707
Star Formation in the Filamentary Dark Cloud GF-9: a Multi-Wavelength Intra-Cloud Comparative Study

NASA Astrophysics Data System (ADS)

Ciardi, David Robert

Filamentary dark clouds (FDCs) are a subclass of small molecular clouds containing small numbers of somewhat regularly spaced dense cores connected by lower density gas and dust. Most of the previous work performed on FDCs has concerned the star formation properties of individual dense cores within the FDCs and has not concerned the FDCs as entities of their own. As a result little is known about the general star formation properties of FDCs. The primary question addressed in this work is 'Within filamentary dark clouds, how does the star formation process within a core region compare to that within a filamentary region?' In order to address the above question, a multi-wavelength observational comparative study has been performed upon a representative dense core (hereafter, GF9-Core) and filamentary region (hereafter, GF9-Fila) within the FDC GF-9 (LDN 1082). At the Five College Radio Astronomy Observatory, the core and filamentary region were observed in the rotational transitions of 12CO/ (J=1/to0),/ 13CO/ (J=1/to0)/ and/ CS/ (J=2/to1) covering a region of 10' x 8'. The temperature, density and kinematic structures of the two regions were deduced from the radio imaging spectroscopy data and were used to estimate the energy balance of the regions. We also obtained 70, 100, 135 and 200 μm images from the Infrared Space Observatory (ISO) covering approximately 12' x 9' which were used to investigate the temperature and density distributions of the dust within the two regions. Finally, at the Wyoming Infrared Observatory using the Aerospace Corporation NICMOS3 camera, the core and filament were imaged in the near-infrared broadband filters J, H, and K-short covering a slightly smaller region of 7' x 7'. The near-infrared survey data were used to search for embedded Class I and Class II protostars and to investigate the density distribution of the dust. We have found that the evolutionary processes of the core region and the filament region proceed along similar evolutionary paths but are governed by the amount of mass within each region. GF9-Core has a greater mass and density than GF9-Fila, and therefore, gravity has a stronger influence on the fate of the dust and gas. Because of the larger mass, GF9-Core has proceeded along the star formation path and is currently engaged at the Class 0 protostar stage. In contrast, GF9-Fila is still in the earlier stages of contraction through ambipolar diffusion and may form a star sometime in the future.
The Spectral Energy Distribution of the Earliest Phases of Massive Star Formation from the Spizter and Herschel Archives

NASA Astrophysics Data System (ADS)

Klein, Randolf; Looney, Leslie; Henning, Thomas; Chakrabarti, Sukanya; Shenoy, Sachin

2015-08-01

Infrared Dark Clouds (IRDCs) are very good candidates for the earliest phases of massive star formation, but can only be found in regions with high infrared background. We have searched for early phases among cold and massive (M>100M⊙) cloud cores by selecting cores from millimeter continuum surveys (Faundez et al. 2004, Sridharan et al. 2005, Klein et al. 2005, Beltran et al. 2006) without associations at short wavelengths. We compared the millimeter continuum peak positions with IR and radio catalogs (2MASS, MSX, IRAS, and NVSS) and excluded cores that had sources associated with the cores' peaks. We compiled a list of 173 cores in over 117 regions that are candidates for very early phases of Massive Star Formation (MSF). Now with the Spitzer and Herschel archives, these cores can be characterized further. The GLIMPSE and MIPSGAL programs alone covered 86 of these regions. The Herschel Archive adds even longer wavelengths. We are compiling this data set to construct the complete spectral energy distribution (SED) in the mid- and far-infrared with good spatial resolution and broad spectral coverage. This allow us to disentangle the complex regions and model the SED of the deeply embedded protostars/clusters.We will be presenting the IR properties of all cores and their embedded source, attempt a characterization, and order the cores in an evolutionary sequence. The resulting properties can be compared to e.g. IRDCs, a class of objects suggested to be the earliest stages of MSF. With the relative large number of cores, we can try to answer questions like: How homogeneous or diverse are our regions in terms of their evolutionary stage? Where do our embedded sources fit in the evolutionary sequence of IRDCs, hot molecular cores, ultra-compact HII regions, etc? How is the MSF shaping the environment and vice versa? Can we extrapolate to the initial conditions of MSF using our evolutionary sequence?
Is the Core Top Really Modern? A Story of Chemical Erosion, Bioturbation, and Lateral Sediment Redistribution from the Eastern Equatorial Pacific

NASA Astrophysics Data System (ADS)

Mekik, F.

2016-12-01

Paleoceanographic work is based on calibrating paleo-environmental proxies using well-preserved core top sediments which represent the last one thousand years or less. However, core top sediments may be in places as old as 9000 years due to various sedimentary and diagenetic processes, such as chemical erosion, bioturbation and lateral sediment redistribution. We hypothesize that in regions with high surface ocean productivity, high organic carbon to calcite ratios reaching the seabed promote calcite dissolution in sediments, even in regions above the lysocline. This process may lead to chemical erosion of core tops which in turn may result in core top aging. The eastern equatorial Pacific (EEP), a popular site for calibration of paleoceanographic proxies, is such a place. Better understanding the relationship between core top age and dissolution will help correct biases inherent in proxy calibration because dissolution of foraminifers alters shell chemistry, and wholesale dissolution of sediments leads to core top aging and loss. We present both new and literature-based core top data of radiocarbon ages from the EEP. We created regional maps of both core top radiocarbon age and calcite preservation measured with the Globorotalia menardii Fragmentation Index (MFI; over 100 core tops). Our maps show a clear pattern of deep sea sedimentary calcite dissolution mimicking the pattern of surface ocean productivity observed from satellites and sediment traps in the EEP. Core top radiocarbon ages generally parallel the dissolution patterns observed in the region. Where this relationship does not hold true, bioturbation and/or lateral sediment redistribution may play a role. Down core radiocarbon and 230Th-normalized sediment accumulation rate data from several cores in the EEP support this hypothesis. Better understanding the role of diagenesis promotes the development of more reliable paleo-environmental proxies.
Core and region-enriched networks of behaviorally regulated genes and the singing genome

PubMed Central

Whitney, Osceola; Pfenning, Andreas R.; Howard, Jason T.; Blatti, Charles A; Liu, Fang; Ward, James M.; Wang, Rui; Audet, Jean-Nicolas; Kellis, Manolis; Mukherjee, Sayan; Sinha, Saurabh; Hartemink, Alexander J.; West, Anne E.; Jarvis, Erich D.

2015-01-01

Songbirds represent an important model organism for elucidating molecular mechanisms that link genes with complex behaviors, in part because they have discrete vocal learning circuits that have parallels with those that mediate human speech. We found that ~10% of the genes in the avian genome were regulated by singing, and we found a striking regional diversity of both basal and singing-induced programs in the four key song nuclei of the zebra finch, a vocal learning songbird. The region-enriched patterns were a result of distinct combinations of region-enriched transcription factors (TFs), their binding motifs, and presinging acetylation of histone 3 at lysine 27 (H3K27ac) enhancer activity in the regulatory regions of the associated genes. RNA interference manipulations validated the role of the calcium-response transcription factor (CaRF) in regulating genes preferentially expressed in specific song nuclei in response to singing. Thus, differential combinatorial binding of a small group of activity-regulated TFs and predefined epigenetic enhancer activity influences the anatomical diversity of behaviorally regulated gene networks. PMID:25504732
Annular core liquid-salt cooled reactor with multiple fuel and blanket zones

DOEpatents

Peterson, Per F.

2013-05-14

A liquid fluoride salt cooled, high temperature reactor having a reactor vessel with a pebble-bed reactor core. The reactor core comprises a pebble injection inlet located at a bottom end of the reactor core and a pebble defueling outlet located at a top end of the reactor core, an inner reflector, outer reflector, and an annular pebble-bed region disposed in between the inner reflector and outer reflector. The annular pebble-bed region comprises an annular channel configured for receiving pebble fuel at the pebble injection inlet, the pebble fuel comprising a combination of seed and blanket pebbles having a density lower than the coolant such that the pebbles have positive buoyancy and migrate upward in said annular pebble-bed region toward the defueling outlet. The annular pebble-bed region comprises alternating radial layers of seed pebbles and blanket pebbles.
Trial coring in LLRW trenches at Chalk River

DOE Office of Scientific and Technical Information (OSTI.GOV)

Donders, R.E.; Killey, R.W.D.; Franklin, K.J.

1996-12-31

As part of a program to better characterize the low-hazard radioactive waste managed by AECL at Chalk River, coring techniques in waste trenches are being assessed. Trial coring has demonstrated that sampling in waste regions is possible, and that boreholes can be placed through the waste trenches. Such coring provides a valuable information gathering technique. Information available from trench coring includes: (1) trench cover depth, waste region depth, waste compaction level, and detailed stratigraphic data; (2) soil moisture content and facility drainage performance; (3) borehole gamma logs that indicate radiation levels in the region of the borehole; (4) biochemical conditionsmore » in the waste regions, vadose zone, and groundwater; (5) site specific information relevant to contaminant migration modelling or remedial actions; (6) information on contaminant releases and inventories. Boreholes through the trenches can also provide a means for early detection of potential contaminant releases.« less
THE HCN/HNC ABUNDANCE RATIO TOWARD DIFFERENT EVOLUTIONARY PHASES OF MASSIVE STAR FORMATION

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jin, Mihwa; Lee, Jeong-Eun; Kim, Kee-Tae, E-mail: mihwajin.sf@gmail.com, E-mail: jeongeun.lee@khu.ac.kr, E-mail: ktkim@kasi.re.kr

2015-07-20

Using the H{sup 13}CN and HN{sup 13}C J = 1–0 line observations, the abundance ratio of HCN/HNC has been estimated for different evolutionary stages of massive star formation: infrared dark clouds (IRDCs), high-mass protostellar objects (HMPOs), and ultracompact H ii regions (UCH iis). IRDCs were divided into “quiescent IRDC cores (qIRDCc)” and “active IRDC cores (aIRDCc),” depending on star formation activity. The HCN/HNC ratio is known to be higher at active and high temperature regions related to ongoing star formation, compared to cold and quiescent regions. Our observations toward 8 qIRDCc, 16 aIRDCc, 23 HMPOs, and 31 UCH iis showmore » consistent results; the ratio is 0.97 (±0.10), 2.65 (±0.88), 4.17 (±1.03), and 8.96 (±3.32) in these respective evolutionary stages, increasing from qIRDCc to UCH iis. The change of the HCN/HNC abundance ratio, therefore, seems directly associated with the evolutionary stages of star formation, which have different temperatures. One suggested explanation for this trend is the conversion of HNC to HCN, which occurs effectively at higher temperatures. To test the explanation, we performed a simple chemical model calculation. In order to fit the observed results, the energy barrier of the conversion must be much lower than the value provided by theoretical calculations.« less
The neural basis of temporal order processing in past and future thought.

PubMed

D'Argembeau, Arnaud; Jeunehomme, Olivier; Majerus, Steve; Bastin, Christine; Salmon, Eric

2015-01-01

Although growing evidence has shown that remembering the past and imagining the future recruit a common core network of frontal-parietal-temporal regions, the extent to which these regions contribute to the temporal dimension of autobiographical thought remains unclear. In this fMRI study, we focused on the event-sequencing aspect of time and examined whether ordering past and future events involve common neural substrates. Participants had to determine which of two past (or future) events occurred (or would occur) before the other, and these order judgments were compared with a task requiring to think about the content of the same past or future events. For both past and future events, we found that the left posterior hippocampus was more activated when establishing the order of events, whereas the anterior hippocampus was more activated when representing their content. Aside from the hippocampus, most of the brain regions that were activated when thinking about temporal order (notably the intraparietal sulcus, dorsolateral pFC, dorsal anterior cingulate, and visual cortex) lied outside the core network and may reflect the involvement of controlled processes and visuospatial imagery to locate events in time. Collectively, these findings suggest (a) that the same processing operations are engaged for ordering past events and planned future events in time, (b) that anterior and posterior portions of the hippocampus are involved in processing different aspects of autobiographical thought, and (c) that temporal order is not necessarily an intrinsic property of memory or future thought but instead requires additional, controlled processes.
A short region of the promoter of the breast cancer associated PLU-1 gene can regulate transcription in vitro and in vivo.

PubMed

Catteau, Aurélie; Rosewell, Ian; Solomon, Ellen; Taylor-Papadimitriou, Joyce

2004-07-01

The recently cloned gene PLU-1 shows restricted expression in adult tissues, with high expression being found in testis, and transiently in the pregnant mammary gland. However, both the gene and the protein product are specifically up-regulated in breast cancer. To investigate the control of expression of the PLU-1 gene, we have cloned and functionally characterised the 5' flanking region of the gene, which was found to contain another putative gene. Two transcription start sites of the PLU-1 gene were mapped by 5' RACE. A short proximal 249 bp region was defined using reporter gene assays, which encompasses the major transcription start site and exhibits a strong constitutive promoter activity in all cell lines tested. However, regions upstream of this sequence repress transcription more effectively in a non-malignant breast cell line as compared to breast cancer cell lines. The 249 bp region is GC-rich and includes consensus Sp1 sites, GC boxes, cAMP-responsive element (CRE) and other putative cis-elements. Mutational analysis showed that two intact conserved Sp1 binding sites (shown here to bind Sp1 and/or Sp3) are critical for constitutive promoter activity, while a negative role for a neighbouring GC box is indicated. The sequence of the core promoter is highly conserved in the mouse and Plu-1 expression in the mouse embryo has been documented. Using transgenesis, we therefore examined the ability of the 249 bp fragment to control expression of a reporter gene during embryogenesis. We found that not only is the core promoter sufficient to activate transcription in vivo, but that the expression of the reporter gene coincides both temporally and spatially with regions where endogenous Plu-1 is highly expressed. This suggests that tissue specific controlling elements are found within the short fragment and are functional in the embryonic environment.
Method of Making a Composite Panel Having Subsonic Transverse Wave Speed Characteristics

NASA Technical Reports Server (NTRS)

Palumbo, Daniel L. (Inventor); Klos, Jacob (Inventor)

2012-01-01

A method of making a composite panel having subsonic transverse wave speed characteristics which has first and second sheets sandwiching a core with at least one of the sheets being attached to the core at first regions thereof and unattached to the core at second regions thereof.
NRF2 regulates core and stabilizing circadian clock loops, coupling redox and timekeeping in Mus musculus

PubMed Central

Sutter, Carrie Hayes; Olesen, Kristin M; Kensler, Thomas W

2018-01-01

Diurnal oscillation of intracellular redox potential is known to couple metabolism with the circadian clock, yet the responsible mechanisms are not well understood. We show here that chemical activation of NRF2 modifies circadian gene expression and rhythmicity, with phenotypes similar to genetic NRF2 activation. Loss of Nrf2 function in mouse fibroblasts, hepatocytes and liver also altered circadian rhythms, suggesting that NRF2 stoichiometry and/or timing of expression are important to timekeeping in some cells. Consistent with this concept, activation of NRF2 at a circadian time corresponding to the peak generation of endogenous oxidative signals resulted in NRF2-dependent reinforcement of circadian amplitude. In hepatocytes, activated NRF2 bound specific enhancer regions of the core clock repressor gene Cry2, increased Cry2 expression and repressed CLOCK/BMAL1-regulated E-box transcription. Together these data indicate that NRF2 and clock comprise an interlocking loop that integrates cellular redox signals into tissue-specific circadian timekeeping. PMID:29481323
Microinjection of muscimol into the dorsomedial hypothalamus suppresses MDMA-evoked sympathetic and behavioral responses

PubMed Central

Rusyniak, Daniel E.; Zaretskaia, Maria V.; Zaretsky, Dmitry V.; DiMicco, Joseph A.

2008-01-01

When given systemically to rats and humans, the drug of abuse 3–4 methylenedioxymethamphetamine (ecstasy, MDMA) elicits hyperthermia, hyperactivity, tachycardia, and hypertension. Chemically stimulating the dorsomedial hypothalamus (DMH), a brain region known to be involved in thermoregulation and in stress responses, causes similar effects. We therefore tested the hypothesis that neuronal activity in the DMH plays a role in MDMA-evoked sympathetic and behavioral responses by microinjecting artificial CSF or muscimol, a neuronal inhibitor, into the DMH prior to intravenous infusion of saline or MDMA in conscious rats. Core temperature, heart rate, mean arterial pressure and locomotor activity were recorded by telemetry every minute for 120 minutes. In rats previously microinjected with CSF, MDMA elicited significant increases from baseline in core temperature (+1.3 ± 0.3°C), locomotion (+50 ± 6 counts/min), heart rate (+142 ± 16 beats/min), and mean arterial pressure (+26 ±3 mmHg). Microinjecting muscimol into the DMH prior to MDMA prevented increases in core temperature and locomotion and attenuated increases in heart rate and mean arterial pressure. These results indicate that neuronal activity in the DMH is necessary for the sympathetic and behavioral responses evoked by MDMA. PMID:18586013
Parameters of oscillation generation regions in open star cluster models

NASA Astrophysics Data System (ADS)

Danilov, V. M.; Putkov, S. I.

2017-07-01

We determine the masses and radii of central regions of open star cluster (OCL) models with small or zero entropy production and estimate the masses of oscillation generation regions in clustermodels based on the data of the phase-space coordinates of stars. The radii of such regions are close to the core radii of the OCL models. We develop a new method for estimating the total OCL masses based on the cluster core mass, the cluster and cluster core radii, and radial distribution of stars. This method yields estimates of dynamical masses of Pleiades, Praesepe, and M67, which agree well with the estimates of the total masses of the corresponding clusters based on proper motions and spectroscopic data for cluster stars.We construct the spectra and dispersion curves of the oscillations of the field of azimuthal velocities v φ in OCL models. Weak, low-amplitude unstable oscillations of v φ develop in cluster models near the cluster core boundary, and weak damped oscillations of v φ often develop at frequencies close to the frequencies of more powerful oscillations, which may reduce the non-stationarity degree in OCL models. We determine the number and parameters of such oscillations near the cores boundaries of cluster models. Such oscillations points to the possible role that gradient instability near the core of cluster models plays in the decrease of the mass of the oscillation generation regions and production of entropy in the cores of OCL models with massive extended cores.
12 CFR 1265.3 - Core mission activities.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 12 Banks and Banking 7 2011-01-01 2011-01-01 false Core mission activities. 1265.3 Section 1265.3 Banks and Banking FEDERAL HOUSING FINANCE AGENCY FEDERAL HOME LOAN BANKS CORE MISSION ACTIVITIES § 1265.3 Core mission activities. The following Bank activities qualify as core mission activities: (a...
12 CFR 940.3 - Core mission activities.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 12 Banks and Banking 7 2010-01-01 2010-01-01 false Core mission activities. 940.3 Section 940.3 Banks and Banking FEDERAL HOUSING FINANCE BOARD FEDERAL HOME LOAN BANK MISSION CORE MISSION ACTIVITIES § 940.3 Core mission activities. The following Bank activities qualify as core mission activities: (a...

The quiescent intracluster medium in the core of the Perseus cluster.

PubMed

2016-07-07

Clusters of galaxies are the most massive gravitationally bound objects in the Universe and are still forming. They are thus important probes of cosmological parameters and many astrophysical processes. However, knowledge of the dynamics of the pervasive hot gas, the mass of which is much larger than the combined mass of all the stars in the cluster, is lacking. Such knowledge would enable insights into the injection of mechanical energy by the central supermassive black hole and the use of hydrostatic equilibrium for determining cluster masses. X-rays from the core of the Perseus cluster are emitted by the 50-million-kelvin diffuse hot plasma filling its gravitational potential well. The active galactic nucleus of the central galaxy NGC 1275 is pumping jetted energy into the surrounding intracluster medium, creating buoyant bubbles filled with relativistic plasma. These bubbles probably induce motions in the intracluster medium and heat the inner gas, preventing runaway radiative cooling--a process known as active galactic nucleus feedback. Here we report X-ray observations of the core of the Perseus cluster, which reveal a remarkably quiescent atmosphere in which the gas has a line-of-sight velocity dispersion of 164 ± 10 kilometres per second in the region 30-60 kiloparsecs from the central nucleus. A gradient in the line-of-sight velocity of 150 ± 70 kilometres per second is found across the 60-kiloparsec image of the cluster core. Turbulent pressure support in the gas is four per cent of the thermodynamic pressure, with large-scale shear at most doubling this estimate. We infer that a total cluster mass determined from hydrostatic equilibrium in a central region would require little correction for turbulent pressure.
Fine-Scale Community Structure Analysis of ANME in Nyegga Sediments with High and Low Methane Flux

PubMed Central

Roalkvam, Irene; Dahle, Håkon; Chen, Yifeng; Jørgensen, Steffen Leth; Haflidason, Haflidi; Steen, Ida Helene

2012-01-01

To obtain knowledge on how regional variations in methane seepage rates influence the stratification, abundance, and diversity of anaerobic methanotrophs (ANME), we analyzed the vertical microbial stratification in a gravity core from a methane micro-seeping area at Nyegga by using 454-pyrosequencing of 16S rRNA gene tagged amplicons and quantitative PCR. These data were compared with previously obtained data from the more active G11 pockmark, characterized by higher methane flux. A down core stratification and high relative abundance of ANME were observed in both cores, with transition from an ANME-2a/b dominated community in low-sulfide and low methane horizons to ANME-1 dominance in horizons near the sulfate-methane transition zone. The stratification was over a wider spatial region and at greater depth in the core with lower methane flux, and the total 16S rRNA copy numbers were two orders of magnitude lower than in the sediments at G11 pockmark. A fine-scale view into the ANME communities at each location was achieved through operational taxonomical units (OTU) clustering of ANME-affiliated sequences. The majority of ANME-1 sequences from both sampling sites clustered within one OTU, while ANME-2a/b sequences were represented in unique OTUs. We suggest that free-living ANME-1 is the most abundant taxon in Nyegga cold seeps, and also the main consumer of methane. The observation of specific ANME-2a/b OTUs at each location could reflect that organisms within this clade are adapted to different geochemical settings, perhaps due to differences in methane affinity. Given that the ANME-2a/b population could be sustained in less active seepage areas, this subgroup could be potential seed populations in newly developed methane-enriched environments. PMID:22715336
The quiescent intracluster medium in the core of the Perseus cluster

DOE PAGES

Aharonian, Felix; Akamatsu, Hiroki; Akimoto, Fumie; ...

2016-07-06

Clusters of galaxies are the most massive gravitationally bound objects in the Universe and are still forming. They are thus important probes of cosmological parameters and many astrophysical processes. However, knowledge of the dynamics of the pervasive hot gas, the mass of which is much larger than the combined mass of all the stars in the cluster, is lacking. Such knowledge would enable insights into the injection of mechanical energy by the central supermassive black hole and the use of hydrostatic equilibrium for determining cluster masses. X-rays from the core of the Perseus cluster are emitted by the 50-million-kelvin diffusemore » hot plasma filling its gravitational potential well. The active galactic nucleus of the central galaxy NGC 1275 is pumping jetted energy into the surrounding intracluster medium, creating buoyant bubbles filled with relativistic plasma. These bubbles probably induce motions in the intracluster medium and heat the inner gas, preventing runaway radiative cooling—a process known as active galactic nucleus feedback. In this paper, we report X-ray observations of the core of the Perseus cluster, which reveal a remarkably quiescent atmosphere in which the gas has a line-of-sight velocity dispersion of 164 ± 10 kilometres per second in the region 30–60 kiloparsecs from the central nucleus. A gradient in the line-of-sight velocity of 150 ± 70 kilometres per second is found across the 60-kiloparsec image of the cluster core. Turbulent pressure support in the gas is four per cent of the thermodynamic pressure, with large-scale shear at most doubling this estimate. Finally, we infer that a total cluster mass determined from hydrostatic equilibrium in a central region would require little correction for turbulent pressure.« less
A New Black Hole Mass Estimate for Obscured Active Galactic Nuclei

NASA Astrophysics Data System (ADS)

Minezaki, Takeo; Matsushita, Kyoko

2015-04-01

We propose a new method for estimating the mass of a supermassive black hole, applicable to obscured active galactic nuclei (AGNs). This method estimates the black hole mass using the width of the narrow core of the neutral FeKα emission line in X-rays and the distance of its emitting region from the black hole based on the isotropic luminosity indicator via the luminosity scaling relation. Assuming the virial relation between the locations and the velocity widths of the neutral FeKα line core and the broad Hβ emission line, the luminosity scaling relation of the neutral FeKα line core emitting region is estimated. We find that the velocity width of the neutral FeKα line core falls between that of the broad Balmer emission lines and the corresponding value at the dust reverberation radius for most of the target AGNs. The black hole mass {{M}BH,FeKα } estimated with this method is then compared with other black hole mass estimates, such as the broad emission-line reverberation mass {{M}BH,rev} for type 1 AGNs, the mass {{M}BH,{{H2}O}} based on the H2O maser, and the single-epoch mass estimate {{M}BH,pol} based on the polarized broad Balmer lines for type 2 AGNs. We find that {{M}BH,FeKα } is consistent with {{M}BH,rev} and {{M}BH,pol}, and find that {{M}BH,FeKα } correlates well with {{M}BH,{{H2}O}}. These results suggest that {{M}BH,FeKα } is a potential indicator of the black hole mass for obscured AGNs. In contrast, {{M}BH,FeKα } is systematically larger than {{M}BH,{{H2}O}} by about a factor of 5, and the possible origins are discussed.
The quiescent intracluster medium in the core of the Perseus cluster

DOE Office of Scientific and Technical Information (OSTI.GOV)

Aharonian, Felix; Akamatsu, Hiroki; Akimoto, Fumie

Clusters of galaxies are the most massive gravitationally bound objects in the Universe and are still forming. They are thus important probes of cosmological parameters and many astrophysical processes. However, knowledge of the dynamics of the pervasive hot gas, the mass of which is much larger than the combined mass of all the stars in the cluster, is lacking. Such knowledge would enable insights into the injection of mechanical energy by the central supermassive black hole and the use of hydrostatic equilibrium for determining cluster masses. X-rays from the core of the Perseus cluster are emitted by the 50-million-kelvin diffusemore » hot plasma filling its gravitational potential well. The active galactic nucleus of the central galaxy NGC 1275 is pumping jetted energy into the surrounding intracluster medium, creating buoyant bubbles filled with relativistic plasma. These bubbles probably induce motions in the intracluster medium and heat the inner gas, preventing runaway radiative cooling—a process known as active galactic nucleus feedback. In this paper, we report X-ray observations of the core of the Perseus cluster, which reveal a remarkably quiescent atmosphere in which the gas has a line-of-sight velocity dispersion of 164 ± 10 kilometres per second in the region 30–60 kiloparsecs from the central nucleus. A gradient in the line-of-sight velocity of 150 ± 70 kilometres per second is found across the 60-kiloparsec image of the cluster core. Turbulent pressure support in the gas is four per cent of the thermodynamic pressure, with large-scale shear at most doubling this estimate. Finally, we infer that a total cluster mass determined from hydrostatic equilibrium in a central region would require little correction for turbulent pressure.« less
The quiescent intracluster medium in the core of the Perseus cluster

DOE Office of Scientific and Technical Information (OSTI.GOV)

Aharonian, Felix; Akamatsu, Hiroki; Akimoto, Fumie

2016-07-06

Clusters of galaxies are the most massive gravitationally bound objects in the Universe and are still forming. They are thus important probes1 of cosmological parameters and many astrophysical processes. However, knowledge of the dynamics of the pervasive hot gas, the mass of which is much larger than the combined mass of all the stars in the cluster, is lacking. Such knowledge would enable insights into the injection of mechanical energy by the central supermassive black hole and the use of hydrostatic equilibrium for determining cluster masses. X-rays from the core of the Perseus cluster are emitted by the 50-million-kelvin diffusemore » hot plasma filling its gravitational potential well. The active galactic nucleus of the central galaxy NGC 1275 is pumping jetted energy into the surrounding intracluster medium, creating buoyant bubbles filled with relativistic plasma. These bubbles probably induce motions in the intracluster medium and heat the inner gas, preventing runaway radiative cooling—a process known as active galactic nucleus feedback2, 3, 4, 5, 6. Here we report X-ray observations of the core of the Perseus cluster, which reveal a remarkably quiescent atmosphere in which the gas has a line-of-sight velocity dispersion of 164 ± 10 kilometres per second in the region 30–60 kiloparsecs from the central nucleus. A gradient in the line-of-sight velocity of 150 ± 70 kilometres per second is found across the 60-kiloparsec image of the cluster core. Turbulent pressure support in the gas is four per cent of the thermodynamic pressure, with large-scale shear at most doubling this estimate. We infer that a total cluster mass determined from hydrostatic equilibrium in a central region would require little correction for turbulent pressure.« less
The quiescent intracluster medium in the core of the Perseus cluster

NASA Astrophysics Data System (ADS)

Hitomi Collaboration; Aharonian, Felix; Akamatsu, Hiroki; Akimoto, Fumie; Allen, Steven W.; Anabuki, Naohisa; Angelini, Lorella; Arnaud, Keith; Audard, Marc; Awaki, Hisamitsu; Axelsson, Magnus; Bamba, Aya; Bautz, Marshall; Blandford, Roger; Brenneman, Laura; Brown, Gregory V.; Bulbul, Esra; Cackett, Edward; Chernyakova, Maria; Chiao, Meng; Coppi, Paolo; Costantini, Elisa; de Plaa, Jelle; den Herder, Jan-Willem; Done, Chris; Dotani, Tadayasu; Ebisawa, Ken; Eckart, Megan; Enoto, Teruaki; Ezoe, Yuichiro; Fabian, Andrew C.; Ferrigno, Carlo; Foster, Adam; Fujimoto, Ryuichi; Fukazawa, Yasushi; Furuzawa, Akihiro; Galeazzi, Massimiliano; Gallo, Luigi; Gandhi, Poshak; Giustini, Margherita; Goldwurm, Andrea; Gu, Liyi; Guainazzi, Matteo; Haba, Yoshito; Hagino, Kouichi; Hamaguchi, Kenji; Harrus, Ilana; Hatsukade, Isamu; Hayashi, Katsuhiro; Hayashi, Takayuki; Hayashida, Kiyoshi; Hiraga, Junko; Hornschemeier, Ann; Hoshino, Akio; Hughes, John; Iizuka, Ryo; Inoue, Hajime; Inoue, Yoshiyuki; Ishibashi, Kazunori; Ishida, Manabu; Ishikawa, Kumi; Ishisaki, Yoshitaka; Itoh, Masayuki; Iyomoto, Naoko; Kaastra, Jelle; Kallman, Timothy; Kamae, Tuneyoshi; Kara, Erin; Kataoka, Jun; Katsuda, Satoru; Katsuta, Junichiro; Kawaharada, Madoka; Kawai, Nobuyuki; Kelley, Richard; Khangulyan, Dmitry; Kilbourne, Caroline; King, Ashley; Kitaguchi, Takao; Kitamoto, Shunji; Kitayama, Tetsu; Kohmura, Takayoshi; Kokubun, Motohide; Koyama, Shu; Koyama, Katsuji; Kretschmar, Peter; Krimm, Hans; Kubota, Aya; Kunieda, Hideyo; Laurent, Philippe; Lebrun, François; Lee, Shiu-Hang; Leutenegger, Maurice; Limousin, Olivier; Loewenstein, Michael; Long, Knox S.; Lumb, David; Madejski, Grzegorz; Maeda, Yoshitomo; Maier, Daniel; Makishima, Kazuo; Markevitch, Maxim; Matsumoto, Hironori; Matsushita, Kyoko; McCammon, Dan; McNamara, Brian; Mehdipour, Missagh; Miller, Eric; Miller, Jon; Mineshige, Shin; Mitsuda, Kazuhisa; Mitsuishi, Ikuyuki; Miyazawa, Takuya; Mizuno, Tsunefumi; Mori, Hideyuki; Mori, Koji; Moseley, Harvey; Mukai, Koji; Murakami, Hiroshi; Murakami, Toshio; Mushotzky, Richard; Nagino, Ryo; Nakagawa, Takao; Nakajima, Hiroshi; Nakamori, Takeshi; Nakano, Toshio; Nakashima, Shinya; Nakazawa, Kazuhiro; Nobukawa, Masayoshi; Noda, Hirofumi; Nomachi, Masaharu; O'Dell, Steve; Odaka, Hirokazu; Ohashi, Takaya; Ohno, Masanori; Okajima, Takashi; Ota, Naomi; Ozaki, Masanobu; Paerels, Frits; Paltani, Stephane; Parmar, Arvind; Petre, Robert; Pinto, Ciro; Pohl, Martin; Porter, F. Scott; Pottschmidt, Katja; Ramsey, Brian; Reynolds, Christopher; Russell, Helen; Safi-Harb, Samar; Saito, Shinya; Sakai, Kazuhiro; Sameshima, Hiroaki; Sato, Goro; Sato, Kosuke; Sato, Rie; Sawada, Makoto; Schartel, Norbert; Serlemitsos, Peter; Seta, Hiromi; Shidatsu, Megumi; Simionescu, Aurora; Smith, Randall; Soong, Yang; Stawarz, Lukasz; Sugawara, Yasuharu; Sugita, Satoshi; Szymkowiak, Andrew; Tajima, Hiroyasu; Takahashi, Hiromitsu; Takahashi, Tadayuki; Takeda, Shin'Ichiro; Takei, Yoh; Tamagawa, Toru; Tamura, Keisuke; Tamura, Takayuki; Tanaka, Takaaki; Tanaka, Yasuo; Tanaka, Yasuyuki; Tashiro, Makoto; Tawara, Yuzuru; Terada, Yukikatsu; Terashima, Yuichi; Tombesi, Francesco; Tomida, Hiroshi; Tsuboi, Yohko; Tsujimoto, Masahiro; Tsunemi, Hiroshi; Tsuru, Takeshi; Uchida, Hiroyuki; Uchiyama, Hideki; Uchiyama, Yasunobu; Ueda, Shutaro; Ueda, Yoshihiro; Ueno, Shiro; Uno, Shin'Ichiro; Urry, Meg; Ursino, Eugenio; de Vries, Cor; Watanabe, Shin; Werner, Norbert; Wik, Daniel; Wilkins, Dan; Williams, Brian; Yamada, Shinya; Yamaguchi, Hiroya; Yamaoka, Kazutaka; Yamasaki, Noriko Y.; Yamauchi, Makoto; Yamauchi, Shigeo; Yaqoob, Tahir; Yatsu, Yoichi; Yonetoku, Daisuke; Yoshida, Atsumasa; Yuasa, Takayuki; Zhuravleva, Irina; Zoghbi, Abderahmen

2016-07-01

Clusters of galaxies are the most massive gravitationally bound objects in the Universe and are still forming. They are thus important probes of cosmological parameters and many astrophysical processes. However, knowledge of the dynamics of the pervasive hot gas, the mass of which is much larger than the combined mass of all the stars in the cluster, is lacking. Such knowledge would enable insights into the injection of mechanical energy by the central supermassive black hole and the use of hydrostatic equilibrium for determining cluster masses. X-rays from the core of the Perseus cluster are emitted by the 50-million-kelvin diffuse hot plasma filling its gravitational potential well. The active galactic nucleus of the central galaxy NGC 1275 is pumping jetted energy into the surrounding intracluster medium, creating buoyant bubbles filled with relativistic plasma. These bubbles probably induce motions in the intracluster medium and heat the inner gas, preventing runaway radiative cooling—a process known as active galactic nucleus feedback. Here we report X-ray observations of the core of the Perseus cluster, which reveal a remarkably quiescent atmosphere in which the gas has a line-of-sight velocity dispersion of 164 ± 10 kilometres per second in the region 30-60 kiloparsecs from the central nucleus. A gradient in the line-of-sight velocity of 150 ± 70 kilometres per second is found across the 60-kiloparsec image of the cluster core. Turbulent pressure support in the gas is four per cent of the thermodynamic pressure, with large-scale shear at most doubling this estimate. We infer that a total cluster mass determined from hydrostatic equilibrium in a central region would require little correction for turbulent pressure.
Cause and Effect of Feedback: Multiphase Gas in Cluster Cores Heated by AGN Jets

NASA Astrophysics Data System (ADS)

Gaspari, M.; Ruszkowski, M.; Sharma, P.

2012-02-01

Multiwavelength data indicate that the X-ray-emitting plasma in the cores of galaxy clusters is not cooling catastrophically. To a large extent, cooling is offset by heating due to active galactic nuclei (AGNs) via jets. The cool-core clusters, with cooler/denser plasmas, show multiphase gas and signs of some cooling in their cores. These observations suggest that the cool core is locally thermally unstable while maintaining global thermal equilibrium. Using high-resolution, three-dimensional simulations we study the formation of multiphase gas in cluster cores heated by collimated bipolar AGN jets. Our key conclusion is that spatially extended multiphase filaments form only when the instantaneous ratio of the thermal instability and free-fall timescales (t TI/t ff) falls below a critical threshold of ≈10. When this happens, dense cold gas decouples from the hot intracluster medium (ICM) phase and generates inhomogeneous and spatially extended Hα filaments. These cold gas clumps and filaments "rain" down onto the central regions of the core, forming a cold rotating torus and in part feeding the supermassive black hole. Consequently, the self-regulated feedback enhances AGN heating and the core returns to a higher entropy level with t TI/t ff > 10. Eventually, the core reaches quasi-stable global thermal equilibrium, and cold filaments condense out of the hot ICM whenever t TI/t ff <~ 10. This occurs despite the fact that the energy from AGN jets is supplied to the core in a highly anisotropic fashion. The effective spatial redistribution of heat is enabled in part by the turbulent motions in the wake of freely falling cold filaments. Increased AGN activity can locally reverse the cold gas flow, launching cold filamentary gas away from the cluster center. Our criterion for the condensation of spatially extended cold gas is in agreement with observations and previous idealized simulations.
Vibroseis Monitoring of San Andreas Fault in California

DOE Office of Scientific and Technical Information (OSTI.GOV)

Korneev, Valeri; Nadeau, Robert

2004-06-11

A unique data set of seismograms for 720 source-receiver paths has been collected as part of a controlled source Vibroseis experiment San Andreas Fault (SAF) at Parkfield. In the experiment, seismic waves repeatedly illuminated the epicentral region of the expected M6 event at Parkfield from June 1987 until November 1996. For this effort, a large shear-wave vibrator was interfaced with the 3-component (3-C) borehole High-Resolution Seismic Network (HRSN), providing precisely timed collection of data for detailed studies of changes in wave propagation associated with stress and strain accumulation in the fault zone (FZ). Data collected by the borehole network weremore » examined for evidence of changes associated with the nucleation process of the anticipated M6 earthquake at Parkfield. These investigations reported significant traveltime changes in the S coda for paths crossing the fault zone southeast of the epicenter and above the rupture zone of the 1966 M6 earthquake. Analysis and modeling of these data and comparison with observed changes in creep, water level, microseismicity, slip-at-depth and propagation from characteristic repeating microearthquakes showed temporal variations in a variety of wave propagation attributes that were synchronous with changes in deformation and local seismicity patterns. Numerical modeling suggests 200 meters as an effective thickness of SAF. The observed variations can be explained by velocity 6 percent velocity variation within SAF core. Numerical modeling studies and a growing number of observations have argued for the propagation of fault-zone guided waves (FZGW) within a SAF zone that is 100 to 200 m wide at seismogenic depths and with 20 to 40 percent lower shear-wave velocity than the adjacent unfaulted rock. Guided wave amplitude tomographic inversion for SAF using microearthquakes, shows clearly that FZGW are significantly less attenuated in a well-defined region of the FZ. This region plunges to the northwest along the northwest boundary of the region of highest moment release and separates locked and slipping sections of the SAF at depth, as determined independently from geodesy, seismicity and the recurrence rates of characteristically repeating microearthquakes. The mechanism for low FZGW attenuation in the zone is possibly due to dewatering by fracture closure and/or fault-normal compression, or changes in fracture orientation due to a complex stress or strain field at the boundary between creeping and locked zones of the San Andreas Fault. Temporal changes of FZGW correlates with changes in overall seismicity. Active monitoring of changes in FZGW has a potential for imaging and detecting of changes in stress within FZ cores. Since FZGW primarily propagate in the low-velocity core region of fault zones, they sample the most active zone of fault deformation and provide greater structural detail of the inner fault core than body waves which propagate primarily outside of the central core region. FZGW also can be used for FZ continuity studies.« less
European validation of The Comprehensive International Classification of Functioning, Disability and Health Core Set for Osteoarthritis from the perspective of patients with osteoarthritis of the knee or hip.

PubMed

Weigl, Martin; Wild, Heike

2017-09-15

To validate the International Classification of Functioning, Disability and Health Comprehensive Core Set for Osteoarthritis from the patient perspective in Europe. This multicenter cross-sectional study involved 375 patients with knee or hip osteoarthritis. Trained health professionals completed the Comprehensive Core Set, and patients completed the Short-Form 36 questionnaire. Content validity was evaluated by calculating prevalences of impairments in body function and structures, limitations in activities and participation and environmental factors, which were either barriers or facilitators. Convergent construct validity was evaluated by correlating the International Classification of Functioning, Disability and Health categories with the Short-Form 36 Physical Component Score and the SF-36 Mental Component Score in a subgroup of 259 patients. The prevalences of all body function, body structure and activities and participation categories were >40%, >32% and >20%, respectively, and all environmental factors were relevant for >16% of patients. Few categories showed relevant differences between knee and hip osteoarthritis. All body function categories and all but two activities and participation categories showed significant correlations with the Physical Component Score. Body functions from the ICF chapter Mental Functions showed higher correlations with the Mental Component Score than with the Physical Component Score. This study supports the validity of the International Classification of Functioning, Disability and Health Comprehensive Core Set for Osteoarthritis. Implications for Rehabilitation Comprehensive International Classification of Functioning, Disability and Health Core Sets were developed as practical tools for application in multidisciplinary assessments. The validity of the Comprehensive International Classification of Functioning, Disability and Health Core Set for Osteoarthritis in this study supports its application in European patients with osteoarthritis. The differences in results between this Europe validation study and a previous Singaporean validation study underscore the need to validate the International Classification of Functioning, Disability and Health Core Sets in different regions of the world.
The JCMT Gould Belt Survey: first results from the SCUBA-2 observations of the Ophiuchus molecular cloud and a virial analysis of its prestellar core population

NASA Astrophysics Data System (ADS)

Pattle, K.; Ward-Thompson, D.; Kirk, J. M.; White, G. J.; Drabek-Maunder, E.; Buckle, J.; Beaulieu, S. F.; Berry, D. S.; Broekhoven-Fiene, H.; Currie, M. J.; Fich, M.; Hatchell, J.; Kirk, H.; Jenness, T.; Johnstone, D.; Mottram, J. C.; Nutter, D.; Pineda, J. E.; Quinn, C.; Salji, C.; Tisi, S.; Walker-Smith, S.; di Francesco, J.; Hogerheijde, M. R.; André, Ph.; Bastien, P.; Bresnahan, D.; Butner, H.; Chen, M.; Chrysostomou, A.; Coude, S.; Davis, C. J.; Duarte-Cabral, A.; Fiege, J.; Friberg, P.; Friesen, R.; Fuller, G. A.; Graves, S.; Greaves, J.; Gregson, J.; Griffin, M. J.; Holland, W.; Joncas, G.; Knee, L. B. G.; Könyves, V.; Mairs, S.; Marsh, K.; Matthews, B. C.; Moriarty-Schieven, G.; Rawlings, J.; Richer, J.; Robertson, D.; Rosolowsky, E.; Rumble, D.; Sadavoy, S.; Spinoglio, L.; Thomas, H.; Tothill, N.; Viti, S.; Wouterloot, J.; Yates, J.; Zhu, M.

2015-06-01

In this paper, we present the first observations of the Ophiuchus molecular cloud performed as part of the James Clerk Maxwell Telescope (JCMT) Gould Belt Survey (GBS) with the SCUBA-2 instrument. We demonstrate methods for combining these data with previous HARP CO, Herschel, and IRAM N2H+ observations in order to accurately quantify the properties of the SCUBA-2 sources in Ophiuchus. We produce a catalogue of all of the sources found by SCUBA-2. We separate these into protostars and starless cores. We list all of the starless cores and perform a full virial analysis, including external pressure. This is the first time that external pressure has been included in this level of detail. We find that the majority of our cores are either bound or virialized. Gravitational energy and external pressure are on average of a similar order of magnitude, but with some variation from region to region. We find that cores in the Oph A region are gravitationally bound prestellar cores, while cores in the Oph C and E regions are pressure-confined. We determine that N2H+ is a good tracer of the bound material of prestellar cores, although we find some evidence for N2H+ freeze-out at the very highest core densities. We find that non-thermal linewidths decrease substantially between the gas traced by C18O and that traced by N2H+, indicating the dissipation of turbulence at higher densities. We find that the critical Bonnor-Ebert stability criterion is not a good indicator of the boundedness of our cores. We detect the pre-brown dwarf candidate Oph B-11 and find a flux density and mass consistent with previous work. We discuss regional variations in the nature of the cores and find further support for our previous hypothesis of a global evolutionary gradient across the cloud from south-west to north-east, indicating sequential star formation across the region.
The neural correlates of dreaming.

PubMed

Siclari, Francesca; Baird, Benjamin; Perogamvros, Lampros; Bernardi, Giulio; LaRocque, Joshua J; Riedner, Brady; Boly, Melanie; Postle, Bradley R; Tononi, Giulio

2017-06-01

Consciousness never fades during waking. However, when awakened from sleep, we sometimes recall dreams and sometimes recall no experiences. Traditionally, dreaming has been identified with rapid eye-movement (REM) sleep, characterized by wake-like, globally 'activated', high-frequency electroencephalographic activity. However, dreaming also occurs in non-REM (NREM) sleep, characterized by prominent low-frequency activity. This challenges our understanding of the neural correlates of conscious experiences in sleep. Using high-density electroencephalography, we contrasted the presence and absence of dreaming in NREM and REM sleep. In both NREM and REM sleep, reports of dream experience were associated with local decreases in low-frequency activity in posterior cortical regions. High-frequency activity in these regions correlated with specific dream contents. Monitoring this posterior 'hot zone' in real time predicted whether an individual reported dreaming or the absence of dream experiences during NREM sleep, suggesting that it may constitute a core correlate of conscious experiences in sleep.
Simultaneous in vivo recording of local brain temperature and electrophysiological signals with a novel neural probe

NASA Astrophysics Data System (ADS)

Fekete, Z.; Csernai, M.; Kocsis, K.; Horváth, Á. C.; Pongrácz, A.; Barthó, P.

2017-06-01

Objective. Temperature is an important factor for neural function both in normal and pathological states, nevertheless, simultaneous monitoring of local brain temperature and neuronal activity has not yet been undertaken. Approach. In our work, we propose an implantable, calibrated multimodal biosensor that facilitates the complex investigation of thermal changes in both cortical and deep brain regions, which records multiunit activity of neuronal populations in mice. The fabricated neural probe contains four electrical recording sites and a platinum temperature sensor filament integrated on the same probe shaft within a distance of 30 µm from the closest recording site. The feasibility of the simultaneous functionality is presented in in vivo studies. The probe was tested in the thalamus of anesthetized mice while manipulating the core temperature of the animals. Main results. We obtained multiunit and local field recordings along with measurement of local brain temperature with accuracy of 0.14 °C. Brain temperature generally followed core body temperature, but also showed superimposed fluctuations corresponding to epochs of increased local neural activity. With the application of higher currents, we increased the local temperature by several degrees without observable tissue damage between 34-39 °C. Significance. The proposed multifunctional tool is envisioned to broaden our knowledge on the role of the thermal modulation of neuronal activity in both cortical and deeper brain regions.
E2F mediates induction of the Sp1-controlled promoter of the human DNA polymerase ɛ B-subunit gene POLE2

PubMed Central

Huang, Deqi; Jokela, Maarit; Tuusa, Jussi; Skog, Sven; Poikonen, Kari; Syväoja, Juhani E.

2001-01-01

The B-subunits of replicative DNA polymerases from Archaea to humans belong to the same protein family, suggesting that they share a common fundamental function. We report here the gene structure for the B-subunit of human DNA polymerase ɛ (POLE2), whose expression and transcriptional regulation is typical for replication proteins with some unique features. The 75 bp core promoter region, located within exon 1, contains an Sp1 element that is a critical determinant of promoter activity as shown by the luciferase reporter, electrophoretic mobility shift and DNase I footprinting assays. Two overlapping E2F elements adjacent to the Sp1 element are essential for full promoter activity and serum response. Binding sites for E2F1 and NF-1 reside immediately downstream from the core promoter region. Our results suggest that human POLE2 is regulated by two E2F–pocket protein complexes, one associated with Sp1 and the other with NF-1. So far, only one replicative DNA polymerase B-subunit gene promoter, POLA2 encoding the B-subunit of DNA polymerase α, has been characterized. Mitogenic activation of the POLE2 promoter by an E2F-mediated mechanism resembles that of POLA2, but the regulation of basal promoter activity is different between these two genes. PMID:11433027
Developmental Reorganization of the Core and Extended Face Networks Revealed by Global Functional Connectivity.

PubMed

Wang, Xu; Zhu, Qi; Song, Yiying; Liu, Jia

2017-08-28

Prior studies on development of functional specialization in human brain mainly focus on age-related increases in regional activation and connectivity among regions. However, a few recent studies on the face network demonstrate age-related decrease in face-specialized activation in the extended face network (EFN), in addition to increase in activation in the core face network (CFN). Here we used a voxel-based global brain connectivity approach to investigate whether development of the face network exhibited both increase and decrease in network connectivity. We found the voxel-wise resting-state functional connectivity (FC) within the CFN increased with age in bilateral posterior superior temporal sulcus, suggesting the integration of the CFN during development. Interestingly, the FC of the voxels in the EFN to the right fusiform face area and occipital face area decreased with age, suggesting that the CFN segregated from the EFN during development. Moreover, the age-related connectivity in the CFN was related to behavioral performance in face processing. Overall, our study demonstrated developmental reorganization of the face network achieved by both integration within the CFN and segregation of the CFN from the EFN, which may account for the simultaneous increases and decreases in neural activation during the development of the face network. © The Author 2017. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.
Maturation of language networks in children: A systematic review of 22years of functional MRI.

PubMed

Weiss-Croft, Louise J; Baldeweg, Torsten

2015-12-01

Understanding how language networks change during childhood is important for theories of cognitive development and for identifying the neural causes of language impairment. Despite this, there is currently little systematic evidence regarding the typical developmental trajectory for language from the field of neuroimaging. We reviewed functional MRI (fMRI) studies published between 1992 and 2014, and quantified the evidence for age-related changes in localisation and lateralisation of fMRI activation in the language network (excluding the cerebellum and subcortical regions). Although age-related changes differed according to task type and input modality, we identified four consistent findings concerning the typical maturation of the language system. First, activation in core semantic processing regions increases with age. Second, activation in lower-level sensory and motor regions increases with age as activation in higher-level control regions reduces. We suggest that this reflects increased automaticity of language processing as children become more proficient. Third, the posterior cingulate cortex and precuneus (regions associated with the default mode network) show increasing attenuation across childhood and adolescence. Finally, language lateralisation is established by approximately 5years of age. Small increases in leftward lateralisation are observed in frontal regions, but these are tightly linked to performance. Copyright © 2015 Elsevier Inc. All rights reserved.
Conformational Changes in a Hyperthermostable Glycoside Hydrolase: Enzymatic Activity Is a Consequence of the Loop Dynamics and Protonation Balance

PubMed Central

de Oliveira, Leandro C.; da Silva, Viviam M.; Colussi, Francieli; Cabral, Aline D.; de Oliveira Neto, Mario; Squina, Fabio M.; Garcia, Wanius

2015-01-01

Endo-β-1, 4-mannanase from Thermotoga petrophila (TpMan) is a modular hyperthermostable enzyme involved in the degradation of mannan-containing polysaccharides. The degradation of these polysaccharides represents a key step for several industrial applications. Here, as part of a continuing investigation of TpMan, the region corresponding to the GH5 domain (TpManGH5) was characterized as a function of pH and temperature. The results indicated that the enzymatic activity of the TpManGH5 is pH-dependent, with its optimum activity occurring at pH 6. At pH 8, the studies demonstrated that TpManGH5 is a molecule with a nearly spherical tightly packed core displaying negligible flexibility in solution, and with size and shape very similar to crystal structure. However, TpManGH5 experiences an increase in radius of gyration in acidic conditions suggesting expansion of the molecule. Furthermore, at acidic pH values, TpManGH5 showed a less globular shape, probably due to a loop region slightly more expanded and flexible in solution (residues Y88 to A105). In addition, molecular dynamics simulations indicated that conformational changes caused by pH variation did not change the core of the TpManGH5, which means that only the above mentioned loop region presents high degree of fluctuations. The results also suggested that conformational changes of the loop region may facilitate polysaccharide and enzyme interaction. Finally, at pH 6 the results indicated that TpManGH5 is slightly more flexible at 65°C when compared to the same enzyme at 20°C. The biophysical characterization presented here is well correlated with the enzymatic activity and provide new insight into the structural basis for the temperature and pH-dependent activity of the TpManGH5. Also, the data suggest a loop region that provides a starting point for a rational design of biotechnological desired features. PMID:25723179
Antifeedant activity and high mortality in the pea aphid Acyrthosiphon pisum (Hemiptera: Aphidae) induced by biostable insect kinin analogs

USDA-ARS?s Scientific Manuscript database

The insect kinins are multifunctional neuropeptides found in a variety of arthropod species, including the pea aphid Acyrthosiphon pisum (Hemiptera: Aphidae). A series of biostable insect kinin analogs based on the shared C-terminal pentapeptide core region were fed in solutions of artificial diet t...
Self-affirmation alters the brain’s response to health messages and subsequent behavior change

PubMed Central

Falk, Emily B.; O’Donnell, Matthew Brook; Cascio, Christopher N.; Tinney, Francis; Kang, Yoona; Lieberman, Matthew D.; Taylor, Shelley E.; An, Lawrence; Resnicow, Kenneth; Strecher, Victor J.

2015-01-01

Health communications can be an effective way to increase positive health behaviors and decrease negative health behaviors; however, those at highest risk are often most defensive and least open to such messages. For example, increasing physical activity among sedentary individuals affects a wide range of important mental and physical health outcomes, but has proven a challenging task. Affirming core values (i.e., self-affirmation) before message exposure is a psychological technique that can increase the effectiveness of a wide range of interventions in health and other domains; however, the neural mechanisms of affirmation’s effects have not been studied. We used functional magnetic resonance imaging (fMRI) to examine neural processes associated with affirmation effects during exposure to potentially threatening health messages. We focused on an a priori defined region of interest (ROI) in ventromedial prefrontal cortex (VMPFC), a brain region selected for its association with self-related processing and positive valuation. Consistent with our hypotheses, those in the self-affirmation condition produced more activity in VMPFC during exposure to health messages and went on to increase their objectively measured activity levels more. These findings suggest that affirmation of core values may exert its effects by allowing at-risk individuals to see the self-relevance and value in otherwise-threatening messages. PMID:25646442
Exploring molecular complexity with ALMA (EMoCA): Detection of three new hot cores in Sagittarius B2(N)

NASA Astrophysics Data System (ADS)

Bonfand, M.; Belloche, A.; Menten, K. M.; Garrod, R. T.; Müller, H. S. P.

2017-08-01

Context. The Sagittarius B2 molecular cloud contains several sites forming high-mass stars. Sgr B2(N) is one of its main centers of activity. It hosts several compact and ultra-compact HII regions, as well as two known hot molecular cores (Sgr B2(N1) and Sgr B2(N2)) in the early stage of the high-mass star formation process, where complex organic molecules (COMs) are detected in the gas phase. Aims: Our goal is to use the high sensitivity of the Atacama Large Millimeter/submillimeter Array (ALMA) to characterize the hot core population in Sgr B2(N) and thereby shed new light on the star formation process in this star-forming region. Methods: We use a complete 3 mm spectral line survey conducted with ALMA to search for faint hot cores in the Sgr B2(N) region. The chemical composition of the detected sources and the column densities are derived by modeling the whole spectra under the assumption of local thermodynamic equilibrium. Population diagrams are constructed to fit rotational temperatures. Integrated intensity maps are produced to derive the peak position and fit the size of each molecule's emission distribution. The kinematic structure of the hot cores is investigated by analyzing the line wing emission of typical outflow tracers. The H2 column densities are computed from ALMA and SMA continuum emission maps. Results: We report the discovery of three new hot cores in Sgr B2(N) that we call Sgr B2(N3), Sgr B2(N4), and Sgr B2(N5). The three sources are associated with class II methanol masers, well known tracers of high-mass star formation, and Sgr B2(N5), also with a UCHII region. Their H2 column densities are found to be between approximately 16 and 36 times lower than the one of the main hot core Sgr B2(N1). The spectra of these new hot cores have spectral line densities of 11 up to 31 emission lines per GHz above the 7σ level, assigned to 22-25 molecules plus 13-20 less abundant isotopologs. We derive rotational temperatures of approximately 140-180 K for the three new hot cores and mean source sizes of 0.4″ for Sgr B2(N3) and 1.0″ for Sgr B2(N4) and Sgr B2(N5). The chemical composition of Sgr B2(N3), Sgr B2(N4), and Sgr B2(N5) is very similar, but it differs from that of Sgr B2(N2). Finally, Sgr B2(N3) and Sgr B2(N5) show high-velocity wing emission in typical outflow tracers, with a bipolar morphology in their integrated intensity maps suggesting the presence of an outflow, like in Sgr B2(N1). No sign of an outflow is found around Sgr B2(N2) and Sgr B2(N4). We derive statistical lifetimes of 4 × 104 yr for the class II methanol maser phase and 6 × 104 yr for the hot core phase in Sgr B2(N). Conclusions: The associations of the hot cores with class II methanol masers, outflows, and/or UCHII regions tentatively suggest the following age sequence: Sgr B2(N4), Sgr B2(N3), SgrB2(N5), Sgr B2(N1). The status of Sgr B2(N2) is unclear. It may contain two distinct sources, a UCHII region and a very young hot core.

Eruption of a Multiple-Turn Helical Magnetic Flux Tube in a Large Flare: Evidence for External and Internal Reconnection that Fits the Breakout Model of Solar Magnetic Eruptions

NASA Technical Reports Server (NTRS)

Gary, G. Allen; Moore, R. L.

2004-01-01

We present observations and an interpretation of a unique multiple-turn spiral flux tube eruption from active region 10030 on 2002 July 15. The TRACE C IV observations clearly show a flux tube that is helical and erupting from within a sheared magnetic field. These observations are interpreted in the context of the breakout model for magnetic field explosions. The initiation of the helix eruption. as determined by a linear backward extrapolation, starts 25 s after the peak of the flare's strongest impulsive spike of microwave gyrosynchrotron radiation early in the flare s explosive phase, implying that the sheared core field is not the site of the initial reconnection. Within the quadrupolar configuration of the active region, the external and internal reconnection sites are identified in each of two consecutive eruptive flares that produce a double coronal mass ejection (CME). The first external breakout reconnection apparently releases an underlying sheared core field and allows it to erupt, leading to internal reconnection in the wake of the erupting helix. This internal reconnection releases the helix and heats the two-ribbon flare. These events lead to the first CME and are followed by a second breakout that initiates a second and larger halo CME. The strong magnetic shear in the region is compatible with the observed rapid proper motion and evolution of the active region. The multiple-turn helix originates from above a sheared-field magnetic inversion line within a filament channel. and starts to erupt only after fast breakout reconnection has started. These observations are counter to the standard flare model and support the breakout model for eruptive flare initiation.
[Land layout for lake tourism based on ecological restraint].

PubMed

Wang, Jian-Ying; Li, Jiang-Feng; Zou, Li-Lin; Liu, Shi-Bin

2012-10-01

To avoid the decrease and deterioration of lake wetlands and the other ecological issues such as lake water pollution that were caused by the unreasonable exploration of lake tourism, a land layout for the tourism development of Liangzi Lake with the priority of ecological security pattern was proposed, based on the minimal cumulative resistance model and by using GIS technology. The study area was divided into four ecological function zones, i. e., core protection zone, ecological buffer zone, ecotone zone, and human activity zone. The core protection zone was the landscape region of ecological source. In the protection zone, new tourism land was forbidden to be increased, and some of the existing fundamental tourism facilities should be removed while some of them should be upgraded. The ecological buffer zone was the landscape region with resistance value ranged from 0 to 4562. In the buffer zone, expansion of tourism land should be forbidden, the existing tourism land should be downsized, and human activities should be isolated from ecological source by converting the human environment to the natural environment as far as possible. The ecotone zone was the landscape region with resistance value ranged from 4562 to 30797. In this zone, the existing tourism land was distributed in patches, tourism land could be expanded properly, and the lake forestry ecological tourism should be developed widely. The human activity zone was the landscape region with resistance value ranged from 30797 to 97334, which would be the key area for the land layout of lake tourism. It was suggested that the land layout for tourism with the priority of landscape ecological security pattern would be the best choice for the lake sustainable development.
Late Holocene Environmental Changes from NY-NJ Estuaries

NASA Technical Reports Server (NTRS)

Peteet, Dorothy M.; Wong, Jennifer K.

2000-01-01

High-resolution records of environmental change in the lower Hudson estuary are quite rare. We present preliminary data from several marshes in the New York- New Jersey region in order to understand the late Holocene environmental history of this region. Our project includes salt marsh cores from Hackensack, Piermont, Staten Island, and Jamaica Bay. Our preliminary research has focused on a 11.15 m. sediment core from Piermont Marsh, New York (40 N, 74 W) in an attempt to document the Holocene environmental history of the region. Lithology, loss-on-ignition (LOI), pollen, plant macrofossils, charcoal, and foraminifera were analyzed. Core lithology consists of peat, silts, and clays that vary in color and texture. The base of the core is AMS C-14 dated to 4190 yr BP. Preliminary low-resolution analysis of the core to date includes sampling at the 1-meter interval throughout the core. LOI of the sediments ranges from 1% to 85%. Average rate of deposition is about .26 cm/yr. Major changes in pollen percentages are visible throughout the core.
Magnetized Converging Flows toward the Hot Core in the Intermediate/High-mass Star-forming Region NGC 6334 V

DOE Office of Scientific and Technical Information (OSTI.GOV)

Juárez, Carmen; Girart, Josep M.; Zamora-Avilés, Manuel

We present Submillimeter Array (SMA) observations at 345 GHz toward the intermediate/high-mass cluster-forming region NGC 6334 V. From the dust emission we spatially resolve three dense condensations, the brightest one presenting the typical chemistry of a hot core. The magnetic field (derived from the dust polarized emission) shows a bimodal converging pattern toward the hot core. The molecular emission traces two filamentary structures at two different velocities, separated by 2 km s{sup −1}, converging to the hot core and following the magnetic field distribution. We compare the velocity field and the magnetic field derived from the SMA observations with magnetohydrodynamicmore » simulations of star-forming regions dominated by gravity. This comparison allows us to show how the gas falls in from the larger-scale extended dense core (∼0.1 pc) of NGC 6334 V toward the higher-density hot core region (∼0.02 pc) through two distinctive converging flows dragging the magnetic field, whose strength seems to have been overcome by gravity.« less
Neural substrates of time perception and impulsivity

PubMed Central

Wittmann, Marc; Simmons, Alan N.; Flagan, Taru; Lane, Scott D.; Wackermann, Jiří; Paulus, Martin P.

2011-01-01

Several studies provide empirical evidence for the association between impulsivity and time perception. However, little is known about the neural substrates underlying this function. This investigation examined the influence of impulsivity on neural activation patterns during the encoding and reproduction of intervals with durations of 3, 9 and 18 seconds using event-related functional magnetic resonance imaging (fMRI). Twenty-seven subjects participated in this study, including 15 high impulsive subjects that were classified based on their self-rating. FMRI activation during the duration reproduction task was correlated with measures of two self-report questionnaires related to the concept of impulsivity (Barratt Impulsiveness Scale, BIS; Zimbardo Time Perspective Inventory, ZTPI). Behaviorally, those individuals who under-reproduced temporal intervals also showed lower scores on the ZTPI future perspective subscale and higher scores on the BIS. FMRI activation revealed an accumulating pattern of neural activity peaking at the end of the 9- and 18-s interval within right posterior insula. Activations of brain regions during the reproduction phase of the timing task, such as those related to motor execution as well as to the ‘core control network’ – encompassing the inferior frontal and medial frontal cortex, the anterior insula as well as the inferior parietal cortex – were significantly correlated with reproduced duration, as well as with BIS and ZTPI subscales. In particular, the greater activation in these regions the shorter were the reproduced intervals, the more impulsive was an individual and the less pronounced the future perspective. Activation in the core control network, thus, may form a biological marker for cognitive time management and for impulsiveness. PMID:21763642
The study of capability natural uranium as fuel cycle input for long life gas cooled fast reactors with helium as coolant

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ariani, Menik, E-mail: menikariani@gmail.com; Satya, Octavianus Cakra; Monado, Fiber

The objective of the present research is to assess the feasibility design of small long-life Gas Cooled Fast Reactor with helium as coolant. GCFR included in the Generation-IV reactor systems are being developed to provide sustainable energy resources that meet future energy demand in a reliable, safe, and proliferation-resistant manner. This reactor can be operated without enrichment and reprocessing forever, once it starts. To obtain the capability of consuming natural uranium as fuel cycle input modified CANDLE burn-up scheme was adopted in this system with different core design. This study has compared the core with three designs of core reactorsmore » with the same thermal power 600 MWth. The fuel composition each design was arranged by divided core into several parts of equal volume axially i.e. 6, 8 and 10 parts related to material burn-up history. The fresh natural uranium is initially put in region 1, after one cycle of 10 years of burn-up it is shifted to region 2 and the region 1 is filled by fresh natural uranium fuel. This concept is basically applied to all regions, i.e. shifted the core of the region (i) into region (i+1) region after the end of 10 years burn-up cycle. The calculation results shows that for the burn-up strategy on “Region-8” and “Region-10” core designs, after the reactors start-up the operation furthermore they only needs natural uranium supply to the next life operation until one period of refueling (10 years).« less
An accelerating high-latitude jet in Earth's core

NASA Astrophysics Data System (ADS)

Finlay, C. C.; Livermore, P. W.; Hollerbach, R.

2016-12-01

The structure of the core-generated magnetic field, and how it changes in time (its secular variation or SV), supplies an invaluable constraint on the dynamics of the outer core. At high latitude, previous studies have noted distinctive behaviour of secular change, in particular suggesting a polar vortex tied to the dynamics within the tangent cylinder region. Recent high-resolution observational models that include data from the Swarm satellites have refined the structure of observed SV, to a rapidly changing circular daisy-chain configuration centred on the north geographic pole, on or very close to the tangent cylinder itself. Motivated by theoretical considerations of the likely dynamical regime of the core, we demonstrate that this feature can be explained by a localised westwards cylindrical jet of 420 km width centred the tangent cylinder, whose amplitude appears to have increased in strength by a factor of three over the period 2000-2016 to about 40 km/yr. The current accelerating phase may be a short fragment of decadal fluctuations of the jet strength linked to both torsional wave activity and the rotation direction of the inner core.
Nonpolar InGaN/GaN Core-Shell Single Nanowire Lasers.

PubMed

Li, Changyi; Wright, Jeremy B; Liu, Sheng; Lu, Ping; Figiel, Jeffrey J; Leung, Benjamin; Chow, Weng W; Brener, Igal; Koleske, Daniel D; Luk, Ting-Shan; Feezell, Daniel F; Brueck, S R J; Wang, George T

2017-02-08

We report lasing from nonpolar p-i-n InGaN/GaN multi-quantum well core-shell single-nanowire lasers by optical pumping at room temperature. The nanowire lasers were fabricated using a hybrid approach consisting of a top-down two-step etch process followed by a bottom-up regrowth process, enabling precise geometrical control and high material gain and optical confinement. The modal gain spectra and the gain curves of the core-shell nanowire lasers were measured using micro-photoluminescence and analyzed using the Hakki-Paoli method. Significantly lower lasing thresholds due to high optical gain were measured compared to previously reported semipolar InGaN/GaN core-shell nanowires, despite significantly shorter cavity lengths and reduced active region volume. Mode simulations show that due to the core-shell architecture, annular-shaped modes have higher optical confinement than solid transverse modes. The results show the viability of this p-i-n nonpolar core-shell nanowire architecture, previously investigated for next-generation light-emitting diodes, as low-threshold, coherent UV-visible nanoscale light emitters, and open a route toward monolithic, integrable, electrically injected single-nanowire lasers operating at room temperature.
Comparison of volumetric bone mineral density in the tibial region of interest for ACL reconstruction.

PubMed

Klein, Scott A; Nyland, John; Caborn, David N M; Kocabey, Yavuz; Nawab, Akbar

2005-12-01

Adequate tibial bone mineral density (BMD) is essential to soft tissue graft fixation during anterior cruciate ligament (ACL) reconstruction. The purpose of this study was to compare volumetric bone plug density measurements at the tibial region of interest for ACL reconstruction using a standardized immersion technique and Archimedes' principle. Cancellous bone cores were harvested from the proximal, middle, and distal metaphyseal regions of the lateral tibia and from the standard tibial tunnel location used for ACL reconstruction of 18 cadaveric specimens. Proximal tibial cores displayed 32.6% greater BMD than middle tibial cores and 31.8% greater BMD than distal tibial cores, but did not differ from the BMD of the tibial tunnel cores. Correlational analysis confirmed that the cancellous BMD in the tibial tunnel related to the cancellous BMD of the proximal and distal lateral tibial metaphysis. In conjunction with its adjacent cortical bone, the cancellous BMD of the region used for standard tibial tunnel placement provides an effective foundation for ACL graft fixation. In tibia with poor BMD, bicortical fixation that incorporates cortical bone from the distal tibial tunnel region is recommended.
3D Magnetic Field Analysis of a Turbine Generator Stator Core-end Region

NASA Astrophysics Data System (ADS)

Wakui, Shinichi; Takahashi, Kazuhiko; Ide, Kazumasa; Takahashi, Miyoshi; Watanabe, Takashi

In this paper we calculated magnetic flux density and eddy current distributions of a 71MVA turbine generator stator core-end using three-dimensional numerical magnetic field analysis. Subsequently, the magnetic flux densities and eddy current densities in the stator core-end region on the no-load and three-phase short circuit conditions obtained by the analysis have good agreements with the measurements. Furthermore, the differences of eddy current and eddy current loss in the stator core-end region for various load conditions are shown numerically. As a result, the facing had an effect that decrease the eddy current loss of the end plate about 84%.
Gender similarities and differences in brain activation strategies: Voxel-based meta-analysis on fMRI studies.

PubMed

AlRyalat, Saif Aldeen

2017-01-01

Gender similarities and differences have long been a matter of debate in almost all human research, especially upon reaching the discussion about brain functions. This large scale meta-analysis was performed on functional MRI studies. It included more than 700 active brain foci from more than 70 different experiments to study gender related similarities and differences in brain activation strategies for three of the main brain functions: Visual-spatial cognition, memory, and emotion. Areas that are significantly activated by both genders (i.e. core areas) for the tested brain function are mentioned, whereas those areas significantly activated exclusively in one gender are the gender specific areas. During visual-spatial cognition task, and in addition to the core areas, males significantly activated their left superior frontal gyrus, compared with left superior parietal lobule in females. For memory tasks, several different brain areas activated by each gender, but females significantly activated two areas from the limbic system during memory retrieval tasks. For emotional task, males tend to recruit their bilateral prefrontal regions, whereas females tend to recruit their bilateral amygdalae. This meta-analysis provides an overview based on functional MRI studies on how males and females use their brain.
Bodensee-Oberschwaben. Eine erfolgreiche Region fernab der Großstädte

NASA Astrophysics Data System (ADS)

Danielzyk, Rainer; Köhler, Stefan; Friedsmann, Philipp

2017-09-01

Bodensee-Oberschwaben is representative of a type of region that does not receive much attention in regional research. The region is located peripherally, away from the metropolises and urban agglomeration areas. Despite seemingly poor initial conditions, the region is economically very successful. A polycentric structure of many small and medium-sized towns characterize Bodensee-Oberschwaben as well as other attributes, which do not allow for classification into traditional categories such as rural or urban. Friedrichshafen, the largest city and the industrial core of the region, contributes significantly to its prosperity. The international high technology companies, which are located here, have their origins in the activities of Graf Zeppelin in the early 20th century. Regional universities and the strong network between actors both within the region as well as between Bodensee-Oberschwaben and the neighboring regions have also had a positive impact on region's development.
Localization of yeast RNA polymerase I core subunits by immunoelectron microscopy.

PubMed Central

Klinger, C; Huet, J; Song, D; Petersen, G; Riva, M; Bautz, E K; Sentenac, A; Oudet, P; Schultz, P

1996-01-01

Immunoelectron microscopy was used to determine the spatial organization of the yeast RNA polymerase I core subunits on a three-dimensional model of the enzyme. Images of antibody-labeled enzymes were compared with the native enzyme to determine the localization of the antibody binding site on the surface of the model. Monoclonal antibodies were used as probes to identify the two largest subunits homologous to the bacterial beta and beta' subunits. The epitopes for the two monoclonal antibodies were mapped using subunit-specific phage display libraries, thus allowing a direct correlation of the structural data with functional information on conserved sequence elements. An epitope close to conserved region C of the beta-like subunit is located at the base of the finger-like domain, whereas a sequence between conserved regions C and D of the beta'-like subunit is located in the apical region of the enzyme. Polyclonal antibodies outlined the alpha-like subunit AC40 and subunit AC19 which were found co-localized also in the apical region of the enzyme. The spatial location of the subunits is correlated with their biological activity and the inhibitory effect of the antibodies. Images PMID:8887555
Influence of anthropogenic activities on PAHs in sediments in a significant gulf of low-latitude developing regions, the Beibu Gulf, South China Sea: distribution, sources, inventory and probability risk.

PubMed

Li, Pingyang; Xue, Rui; Wang, Yinghui; Zhang, Ruijie; Zhang, Gan

2015-01-15

Fifteen polycyclic aromatic hydrocarbons (PAHs) in 41 surface sediment samples and a sediment core (50 cm) from the Beibu Gulf, a significant low-latitude developing gulf, were analyzed. PAHs concentrations were 3.01-388 ng g(-)(1) (mean 95.5 ng g(-)(1)) in the surface sediments and 10.5-87.1 ng g(-)(1) (average 41.1 ng g(-)(1)) in the sediment core. Source apportionment indicated that PAHs were generated from coke production and vehicular emissions (39.4%), coal and biomass combustion (35.8%), and petrogenic sources (24.8%). PAHs were mainly concentrated in the industrialized and urbanized regions and the harbor, and were transported by atmospheric deposition to the marine matrix. The mass inventory (1.57-2.62t) and probability risk showed sediments here served as an important reservoir but low PAH risk. Different from oil and natural gas in developed regions, coal combustion has always been a significant energy consumption pattern in this developing region for the past 30 years (56 ± 5%). Copyright © 2014 Elsevier Ltd. All rights reserved.
The JCMT Gould Belt Survey: Dense Core Clusters in Orion B

NASA Astrophysics Data System (ADS)

Kirk, H.; Johnstone, D.; Di Francesco, J.; Lane, J.; Buckle, J.; Berry, D. S.; Broekhoven-Fiene, H.; Currie, M. J.; Fich, M.; Hatchell, J.; Jenness, T.; Mottram, J. C.; Nutter, D.; Pattle, K.; Pineda, J. E.; Quinn, C.; Salji, C.; Tisi, S.; Hogerheijde, M. R.; Ward-Thompson, D.; The JCMT Gould Belt Survey Team

2016-04-01

The James Clerk Maxwell Telescope Gould Belt Legacy Survey obtained SCUBA-2 observations of dense cores within three sub-regions of Orion B: LDN 1622, NGC 2023/2024, and NGC 2068/2071, all of which contain clusters of cores. We present an analysis of the clustering properties of these cores, including the two-point correlation function and Cartwright’s Q parameter. We identify individual clusters of dense cores across all three regions using a minimal spanning tree technique, and find that in each cluster, the most massive cores tend to be centrally located. We also apply the independent M-Σ technique and find a strong correlation between core mass and the local surface density of cores. These two lines of evidence jointly suggest that some amount of mass segregation in clusters has happened already at the dense core stage.
Atmospheric soluble dust records from a Tibetan ice core: Possible climate proxies and teleconnection with the Pacific Decadal Oscillation

NASA Astrophysics Data System (ADS)

Grigholm, B.; Mayewski, P. A.; Kang, S.; Zhang, Y.; Kaspari, S.; Sneed, S. B.; Zhang, Q.

2009-10-01

In autumn 2005, a joint expedition between the University of Maine and the Institute of Tibetan Plateau Research recovered three ice cores from Guoqu Glacier (33°34'37.8″N, 91°10'35.3″E, 5720 m above sea level) on the northern side of Mt. Geladaindong, central Tibetan Plateau. Isotopes (δ18O), major soluble ions (Na+, K+, Mg2+, Ca2+, Cl-, NO3-, SO42-), and radionuclide (β-activity) measurements from one of the cores revealed a 70-year record (1935-2005). Statistical analysis of major ion time series suggests that atmospheric soluble dust species dominate the chemical signature and that background dust levels conceal marine ion species deposition. The soluble dust time series have interspecies relations and common structure (empirical orthogonal function (EOF) 1), suggesting a similar soluble dust source or transport route. Annual and seasonal correlations between the EOF 1 time series and National Centers for Environmental Prediction/National Center for Atmospheric Research reanalysis climate variables (1948-2004) suggest that the Mt. Geladaindong ice core record provides a proxy for local and regional surface pressure. An approximately threefold decrease of soluble dust concentrations in the middle to late 1970s, accompanied by regional increases in pressure and temperature and decreases in wind velocity, coincides with the major 1976-1977 shift of the Pacific Decadal Oscillation (PDO) from a negative to a positive state. This is the first ice core evidence of a potential teleconnection between central Asian atmospheric soluble dust loading and the PDO. Analysis of temporally longer ice cores from Mt. Geladaindong may enhance understanding of the relationship between the PDO and central Asian atmospheric circulation and subsequent atmospheric soluble dust loading.
The minimal promoter region of the dense-core vesicle protein IA-2: transcriptional regulation by CREB.

PubMed

Cai, Tao; Hirai, Hiroki; Xu, Huanyu; Notkins, Abner L

2015-06-01

IA-2 is a transmembrane protein found in the dense-core vesicles (DCV) of neuroendocrine cells and one of the major autoantigens in type 1 diabetes. DCV are involved in the secretion of hormones (e.g., insulin) and neurotransmitters. Stimulation of pancreatic β cells with glucose upregulates the expression of IA-2 and an increase in IA-2 results in an increase in the number of DCV. Little is known, however, about the promoter region of IA-2 or the transcriptional factors that regulate the expression of this gene. In the present study, we constructed eight deletion fragments from the upstream region of the IA-2 transcription start site and linked them to a luciferase reporter. By this approach, we have identified a short bp region (-216 to +115) that has strong promoter activity. We also identified a transcription factor, cAMP responsive element-binding protein (CREB), which binds to two CREB-related binding sites located in this region. The binding of CREB to these sites enhanced IA-2 transcription by more than fivefold. We confirmed these findings by site-directed mutagenesis, chromatin immunoprecipitation assays and RNAi inhibition. Based on these findings, we conclude that the PKA pathway is a critical, but not the exclusive signaling pathway involved in IA-2 gene expression.
Characteristics of a wingtip vortex from an oscillating winglet

NASA Astrophysics Data System (ADS)

Guha, T. K.; Kumar, R.

2017-01-01

Initial perturbations in the wingtip vortices can potentially lead to instabilities that significantly reduce their lifetime in the wake of an aircraft. An active winglet capable of oscillating about its point of attachment to the main wing-section is developed using piezoelectric macro fiber composite, to actively perturb the vortex at its onset. Resonance characteristics of the actuated winglet oscillations are evaluated at different excitation levels and aerodynamic loading. Mean near-field characteristics of the vortex, developing from a stationary and an oscillating winglet, are investigated with the help of stereoscopic particle image velocimetry. Results show that the amplitude of winglet oscillations increases linearly with input excitation, to a highest attainable value of nearly four times the airfoil thickness at the winglet tip. The vortex developing from a winglet is stretched along its axis, having an elliptical core with non-uniform vorticity distribution. Actuation leads to spatial oscillations of the vortex core together with a reduction in the mean peak vorticity levels. The amplitude of the actuated core oscillations remains constant in the investigated region of the wake.
Perispeckles are major assembly sites for the exon junction core complex

PubMed Central

Daguenet, Elisabeth; Baguet, Aurélie; Degot, Sébastien; Schmidt, Ute; Alpy, Fabien; Wendling, Corinne; Spiegelhalter, Coralie; Kessler, Pascal; Rio, Marie-Christine; Le Hir, Hervé; Bertrand, Edouard; Tomasetto, Catherine

2012-01-01

The exon junction complex (EJC) is loaded onto mRNAs as a consequence of splicing and regulates multiple posttranscriptional events. MLN51, Magoh, Y14, and eIF4A3 form a highly stable EJC core, but where this tetrameric complex is assembled in the cell remains unclear. Here we show that EJC factors are enriched in domains that we term perispeckles and are visible as doughnuts around nuclear speckles. Fluorescence resonance energy transfer analyses and EJC assembly mutants show that perispeckles do not store free subunits, but instead are enriched for assembled cores. At the ultrastructural level, perispeckles are distinct from interchromatin granule clusters that may function as storage sites for splicing factors and intermingle with perichromatin fibrils, where nascent RNAs and active RNA Pol II are present. These results support a model in which perispeckles are major assembly sites for the tetrameric EJC core. This subnuclear territory thus represents an intermediate region important for mRNA maturation, between transcription sites and splicing factor reservoirs and assembly sites. PMID:22419818
Fusion activation through attachment protein stalk domains indicates a conserved core mechanism of paramyxovirus entry into cells.

PubMed

Bose, Sayantan; Song, Albert S; Jardetzky, Theodore S; Lamb, Robert A

2014-04-01

Paramyxoviruses are a large family of membrane-enveloped negative-stranded RNA viruses causing important diseases in humans and animals. Two viral integral membrane glycoproteins (fusion [F] and attachment [HN, H, or G]) mediate a concerted process of host receptor recognition, followed by the fusion of viral and cellular membranes, resulting in viral nucleocapsid entry into the cytoplasm. However, the sequence of events that closely links the timing of receptor recognition by HN, H, or G and the "triggering" interaction of the attachment protein with F is unclear. F activation results in F undergoing a series of irreversible conformational rearrangements to bring about membrane merger and virus entry. By extensive study of properties of multiple paramyxovirus HN proteins, we show that key features of F activation, including the F-activating regions of HN proteins, flexibility within this F-activating region, and changes in globular head-stalk interactions are highly conserved. These results, together with functionally active "headless" mumps and Newcastle disease virus HN proteins, provide insights into the F-triggering process. Based on these data and very recently published data for morbillivirus H and henipavirus G proteins, we extend our recently proposed "stalk exposure model" to other paramyxoviruses and propose an "induced fit" hypothesis for F-HN/H/G interactions as conserved core mechanisms of paramyxovirus-mediated membrane fusion. Paramyxoviruses are a large family of membrane-enveloped negative-stranded RNA viruses causing important diseases in humans and animals. Two viral integral membrane glycoproteins (fusion [F] and attachment [HN, H, or G]) mediate a concerted process of host receptor recognition, followed by the fusion of viral and cellular membranes. We describe here the molecular mechanism by which HN activates the F protein such that virus-cell fusion is controlled and occurs at the right time and the right place. We extend our recently proposed "stalk exposure model" first proposed for parainfluenza virus 5 to other paramyxoviruses and propose an "induced fit" hypothesis for F-HN/H/G interactions as conserved core mechanisms of paramyxovirus-mediated membrane fusion.

Fusion Activation through Attachment Protein Stalk Domains Indicates a Conserved Core Mechanism of Paramyxovirus Entry into Cells

PubMed Central

Bose, Sayantan; Song, Albert S.; Jardetzky, Theodore S.

2014-01-01

ABSTRACT Paramyxoviruses are a large family of membrane-enveloped negative-stranded RNA viruses causing important diseases in humans and animals. Two viral integral membrane glycoproteins (fusion [F] and attachment [HN, H, or G]) mediate a concerted process of host receptor recognition, followed by the fusion of viral and cellular membranes, resulting in viral nucleocapsid entry into the cytoplasm. However, the sequence of events that closely links the timing of receptor recognition by HN, H, or G and the “triggering” interaction of the attachment protein with F is unclear. F activation results in F undergoing a series of irreversible conformational rearrangements to bring about membrane merger and virus entry. By extensive study of properties of multiple paramyxovirus HN proteins, we show that key features of F activation, including the F-activating regions of HN proteins, flexibility within this F-activating region, and changes in globular head-stalk interactions are highly conserved. These results, together with functionally active “headless” mumps and Newcastle disease virus HN proteins, provide insights into the F-triggering process. Based on these data and very recently published data for morbillivirus H and henipavirus G proteins, we extend our recently proposed “stalk exposure model” to other paramyxoviruses and propose an “induced fit” hypothesis for F-HN/H/G interactions as conserved core mechanisms of paramyxovirus-mediated membrane fusion. IMPORTANCE Paramyxoviruses are a large family of membrane-enveloped negative-stranded RNA viruses causing important diseases in humans and animals. Two viral integral membrane glycoproteins (fusion [F] and attachment [HN, H, or G]) mediate a concerted process of host receptor recognition, followed by the fusion of viral and cellular membranes. We describe here the molecular mechanism by which HN activates the F protein such that virus-cell fusion is controlled and occurs at the right time and the right place. We extend our recently proposed “stalk exposure model” first proposed for parainfluenza virus 5 to other paramyxoviruses and propose an “induced fit” hypothesis for F-HN/H/G interactions as conserved core mechanisms of paramyxovirus-mediated membrane fusion. PMID:24453369
Modelling the formation of necrotic regions in avascular tumours.

PubMed

Tindall, M J; Please, C P; Peddie, M J

2008-01-01

The mechanisms underlying the formation of necrotic regions within avascular tumours are not well understood. In this paper, we examine the relative roles of nutrient deprivation and of cell death, from both the proliferating phase of the cell cycle via apoptosis and from the quiescent phase via necrosis, in changing the structure within multicellular tumour spheroids and particularly the accumulation of dead cell material in the centre. A mathematical model is presented and studied that accounts for nutrient diffusion, changes in cell cycling rates, the two different routes to cell death as well as active motion of cells and passive motion of the dead cell material. In studying the accumulation of dead cell matter we do not distinguish between the route by which each was formed. The resulting mathematical model is examined for a number of scenarios. Results show that in many cases the size of the necrotic core is closely correlated with low levels in nutrient concentration. However, in certain cases, particularly where the rate of necrosis is large, the resulting necrotic core can lead to regions of non-negligible nutrient concentration-dependent upon the mode of cell death.
Identifying Regional Key Eco-Space to Maintain Ecological Security Using GIS

PubMed Central

Xie, Hualin; Yao, Guanrong; Wang, Peng

2014-01-01

Ecological security and environmental sustainability are the foundations of sustainable development. With the acceleration of urbanization, increasing human activities have promoted greater impacts on the eco-spaces that maintain ecological security. Regional key eco-space has become the primary need to maintain environmental sustainability and can offer society with continued ecosystem services. In this paper, considering the security of water resources, biodiversity conservation, disaster avoidance and protection and natural recreation, an integrated index of eco-space importance was established and a method for identifying key eco-space was created using GIS, with Lanzhou City, China as a case study. The results show that the area of core eco-space in the Lanzhou City is approximately 50,908.7 hm2, accounting for 40% of the region’s total area. These areas mainly consist of geological hazard protection zones and the core zones of regional river systems, wetlands, nature reserves, forest parks and scenic spots. The results of this study provide some guidance for the management of ecological security, ecological restoration and environmental sustainability. PMID:24590051
Iron-silicate reaction at CMB and formation of core signature in plume source region: An experimental approach

NASA Astrophysics Data System (ADS)

Ohtani, E.; Sakai, T.; Kondo, T.; Miyahara, M.; Terasaki, H.

2006-12-01

Recent progress of laser heating diamond anvil cell (LHDAC) techniques made it possible to achieve the conditions of pressures and temperatures exceeding the core-mantle boundary conditions, i.e., 130 GPa and 3000-3500 K, and we can now be possible to study the recovered samples from the condition of the core- mantle boundary. We used the focused ion beam (FIB) method for preparation of the recovered samples and the analytical transmission electron microscope (ATEM) for their characterization, which are the ideal tools for studying the recovered samples from mega-bar conditions. In order to clarify the structure of the bottom of the CMB region, we have conducted high pressure and temperature experiments on the reaction between metallic iron and post-perovskite which can simulate the chemical reactions at CMB. We have conducted reaction experiments between molten iron and post-perovskite at the conditions equivalent to the CMB, 139 GPa and 3000 K. Significant amounts of oxygen up to 6.3 wt. percent and silicon up to 4.0 wt. percent are dissolved in metallic iron, and the solubility of silicon and oxygen in metallic iron can readily account for 7-10 wt. percent of the core density deficit. The dissolution of silicon into molten iron in the primordial magma ocean with the depth of the deep lower mantle can account for the Mg/Si ratio of the mantle higher than that of C1-chondrite. The dihedral angle between post-perovskite and molten iron is around 67 degrees, which is larger than that of perovskite and molten iron, 51 degrees (Takafuji et al., 2004). A core signature has been reported as Re and Os isotope anomalies in the plume magmas originating from the core-mantle boundary region, and such isotopic anomalies can be easily generated by contamination of 0.5-1 wt. percent of the trapped core metal at CMB (e.g., Brandon et al., 2005). A significant disturbance is expected at CMB to form a mixing region of the mantle and core materials as was suggested by Kellogg et al. (1999), Brandon et al. (1998) and Lay et al. (1998). The mixed core materials tend to percolate back to the core in the perovskite region with the dihedral angle less than 60 degrees, whereas the dihedral angle around 67 degrees between post-perovskite and molten iron implies that a small amount of metallic iron up to 2 vol. percent (1 wt. percent) can be trapped after separation of the core materials (von Bargen and Waff, 1986) in the post-perovskite region at CMB. The core metal trapped in the post-perovskite region can produce effectively the core signature of the plume source at the base of the lower mantle.
High permeability cores to optimize the stimulation of deeply located brain regions using transcranial magnetic stimulation

NASA Astrophysics Data System (ADS)

Salvador, R.; Miranda, P. C.; Roth, Y.; Zangen, A.

2009-05-01

Efficient stimulation of deeply located brain regions with transcranial magnetic stimulation (TMS) poses many challenges, arising from the fact that the induced field decays rapidly and becomes less focal with depth. We propose a new method to improve the efficiency of TMS of deep brain regions that combines high permeability cores, to increase focality and field intensity, with a coil specifically designed to induce a field that decays slowly with increasing depth. The performance of the proposed design was investigated using the finite element method to determine the total electric field induced by this coil/core arrangement on a realistically shaped homogeneous head model. The calculations show that the inclusion of the cores increases the field's magnitude by as much as 25% while also decreasing the field's decay with depth along specific directions. The focality, as measured by the area where the field's norm is greater than 1/\\sqrt 2 of its maximum value, is also improved by as much as 15% with some core arrangements. The coil's inductance is not significantly increased by the cores. These results show that the presence of the cores might make this specially designed coil even more suited for the effective stimulation of deep brain regions.
A cerebellar thalamic cortical circuit for error-related cognitive control.

PubMed

Ide, Jaime S; Li, Chiang-shan R

2011-01-01

Error detection and behavioral adjustment are core components of cognitive control. Numerous studies have focused on the anterior cingulate cortex (ACC) as a critical locus of this executive function. Our previous work showed greater activation in the dorsal ACC and subcortical structures during error detection, and activation in the ventrolateral prefrontal cortex (VLPFC) during post-error slowing (PES) in a stop signal task (SST). However, the extent of error-related cortical or subcortical activation across subjects was not correlated with VLPFC activity during PES. So then, what causes VLPFC activation during PES? To address this question, we employed Granger causality mapping (GCM) and identified regions that Granger caused VLPFC activation in 54 adults performing the SST during fMRI. These brain regions, including the supplementary motor area (SMA), cerebellum, a pontine region, and medial thalamus, represent potential targets responding to errors in a way that could influence VLPFC activation. In confirmation of this hypothesis, the error-related activity of these regions correlated with VLPFC activation during PES, with the cerebellum showing the strongest association. The finding that cerebellar activation Granger causes prefrontal activity during behavioral adjustment supports a cerebellar function in cognitive control. Furthermore, multivariate GCA described the "flow of information" across these brain regions. Through connectivity with the thalamus and SMA, the cerebellum mediates error and post-error processing in accord with known anatomical projections. Taken together, these new findings highlight the role of the cerebello-thalamo-cortical pathway in an executive function that has heretofore largely been ascribed to the anterior cingulate-prefrontal cortical circuit. Copyright © 2010 Elsevier Inc. All rights reserved.
Crystal structure and novel recognition motif of rho ADP-ribosylating C3 exoenzyme from Clostridium botulinum: structural insights for recognition specificity and catalysis.

PubMed

Han, S; Arvai, A S; Clancy, S B; Tainer, J A

2001-01-05

Clostridium botulinum C3 exoenzyme inactivates the small GTP-binding protein family Rho by ADP-ribosylating asparagine 41, which depolymerizes the actin cytoskeleton. C3 thus represents a major family of the bacterial toxins that transfer the ADP-ribose moiety of NAD to specific amino acids in acceptor proteins to modify key biological activities in eukaryotic cells, including protein synthesis, differentiation, transformation, and intracellular signaling. The 1.7 A resolution C3 exoenzyme structure establishes the conserved features of the core NAD-binding beta-sandwich fold with other ADP-ribosylating toxins despite little sequence conservation. Importantly, the central core of the C3 exoenzyme structure is distinguished by the absence of an active site loop observed in many other ADP-ribosylating toxins. Unlike the ADP-ribosylating toxins that possess the active site loop near the central core, the C3 exoenzyme replaces the active site loop with an alpha-helix, alpha3. Moreover, structural and sequence similarities with the catalytic domain of vegetative insecticidal protein 2 (VIP2), an actin ADP-ribosyltransferase, unexpectedly implicates two adjacent, protruding turns, which join beta5 and beta6 of the toxin core fold, as a novel recognition specificity motif for this newly defined toxin family. Turn 1 evidently positions the solvent-exposed, aromatic side-chain of Phe209 to interact with the hydrophobic region of Rho adjacent to its GTP-binding site. Turn 2 evidently both places the Gln212 side-chain for hydrogen bonding to recognize Rho Asn41 for nucleophilic attack on the anomeric carbon of NAD ribose and holds the key Glu214 catalytic side-chain in the adjacent catalytic pocket. This proposed bipartite ADP-ribosylating toxin turn-turn (ARTT) motif places the VIP2 and C3 toxin classes into a single ARTT family characterized by analogous target protein recognition via turn 1 aromatic and turn 2 hydrogen-bonding side-chain moieties. Turn 2 centrally anchors the catalytic Glu214 within the ARTT motif, and furthermore distinguishes the C3 toxin class by a conserved turn 2 Gln and the VIP2 binary toxin class by a conserved turn 2 Glu for appropriate target side-chain hydrogen-bonding recognition. Taken together, these structural results provide a molecular basis for understanding the coupled activity and recognition specificity for C3 and for the newly defined ARTT toxin family, which acts in the depolymerization of the actin cytoskeleton. This beta5 to beta6 region of the toxin fold represents an experimentally testable and potentially general recognition motif region for other ADP-ribosylating toxins that have a similar beta-structure framework. Copyright 2001 Academic Press.
Multiple Regions of a Cortical Network Commonly Encode the Meaning of Words in Multiple Grammatical Positions of Read Sentences.

PubMed

Anderson, Andrew James; Lalor, Edmund C; Lin, Feng; Binder, Jeffrey R; Fernandino, Leonardo; Humphries, Colin J; Conant, Lisa L; Raizada, Rajeev D S; Grimm, Scott; Wang, Xixi

2018-05-16

Deciphering how sentence meaning is represented in the brain remains a major challenge to science. Semantically related neural activity has recently been shown to arise concurrently in distributed brain regions as successive words in a sentence are read. However, what semantic content is represented by different regions, what is common across them, and how this relates to words in different grammatical positions of sentences is weakly understood. To address these questions, we apply a semantic model of word meaning to interpret brain activation patterns elicited in sentence reading. The model is based on human ratings of 65 sensory/motor/emotional and cognitive features of experience with words (and their referents). Through a process of mapping functional Magnetic Resonance Imaging activation back into model space we test: which brain regions semantically encode content words in different grammatical positions (e.g., subject/verb/object); and what semantic features are encoded by different regions. In left temporal, inferior parietal, and inferior/superior frontal regions we detect the semantic encoding of words in all grammatical positions tested and reveal multiple common components of semantic representation. This suggests that sentence comprehension involves a common core representation of multiple words' meaning being encoded in a network of regions distributed across the brain.
Core histone genes of Giardia intestinalis: genomic organization, promoter structure, and expression

PubMed Central

Yee, Janet; Tang, Anita; Lau, Wei-Ling; Ritter, Heather; Delport, Dewald; Page, Melissa; Adam, Rodney D; Müller, Miklós; Wu, Gang

2007-01-01

Background Giardia intestinalis is a protist found in freshwaters worldwide, and is the most common cause of parasitic diarrhea in humans. The phylogenetic position of this parasite is still much debated. Histones are small, highly conserved proteins that associate tightly with DNA to form chromatin within the nucleus. There are two classes of core histone genes in higher eukaryotes: DNA replication-independent histones and DNA replication-dependent ones. Results We identified two copies each of the core histone H2a, H2b and H3 genes, and three copies of the H4 gene, at separate locations on chromosomes 3, 4 and 5 within the genome of Giardia intestinalis, but no gene encoding a H1 linker histone could be recognized. The copies of each gene share extensive DNA sequence identities throughout their coding and 5' noncoding regions, which suggests these copies have arisen from relatively recent gene duplications or gene conversions. The transcription start sites are at triplet A sequences 1–27 nucleotides upstream of the translation start codon for each gene. We determined that a 50 bp region upstream from the start of the histone H4 coding region is the minimal promoter, and a highly conserved 15 bp sequence called the histone motif (him) is essential for its activity. The Giardia core histone genes are constitutively expressed at approximately equivalent levels and their mRNAs are polyadenylated. Competition gel-shift experiments suggest that a factor within the protein complex that binds him may also be a part of the protein complexes that bind other promoter elements described previously in Giardia. Conclusion In contrast to other eukaryotes, the Giardia genome has only a single class of core histone genes that encode replication-independent histones. Our inability to locate a gene encoding the linker histone H1 leads us to speculate that the H1 protein may not be required for the compaction of Giardia's small and gene-rich genome. PMID:17425802
California Earthquake Clearinghouse Crisis Information-Sharing Strategy in Support of Situational Awareness, Understanding Interdependencies of Critical Infrastructure, Regional Resilience, Preparedness, Risk Assessment/mitigation, Decision-Making and Everyday Operational Needs

NASA Astrophysics Data System (ADS)

Rosinski, A.; Morentz, J.; Beilin, P.

2017-12-01

The principal function of the California Earthquake Clearinghouse is to provide State and Federal disaster response managers, and the scientific and engineering communities, with prompt information on ground failure, structural damage, and other consequences from significant seismic events such as earthquakes and tsunamis. The overarching problem highlighted in discussions with Clearinghouse partners is the confusion and frustration of many of the Operational Area representatives, and some regional utilities throughout the state on what software applications they should be using and maintaining to meet State, Federal, and Local, requirements, and for what purposes, and how to deal with the limitations of these applications. This problem is getting in the way of making meaningful progress on developing multi-application interoperability and the necessary supporting cross-sector information-sharing procedures and dialogue on essential common operational information that entities need to share for different all hazards missions and related operational activities associated with continuity, security, and resilience. The XchangeCore based system the Clearinghouse is evolving helps deal with this problem, and does not compound it by introducing yet another end-user application; there is no end-user interface with which one views XchangeCore, all viewing of data provided through XchangeCore occurs in and on existing, third-party operational applications. The Clearinghouse efforts with XchangeCore are compatible with FEMA, which is currently using XchangeCore-provided data for regional and National Business Emergency Operations Center (source of business information sharing during emergencies) response. Also important, and should be emphasized, is that information-sharing is not just for response, but for preparedness, risk assessment/mitigation decision-making, and everyday operational needs for situational awareness. In other words, the benefits of the Clearinghouse information sharing efforts transcend emergency response. The Clearinghouse is in the process of developing an Information-Sharing System Guide and CONOPS/ templates, that should be aimed a multi-stakeholder, non-technical audience.
Probing the Earth's core with magnetic field observations from Swarm

NASA Astrophysics Data System (ADS)

Finlay, Christopher; Olsen, Nils; Kotsiaros, Stavros; Gillet, Nicolas; Tøffner-Clausen, Lars

2016-07-01

By far the largest part of the Earth's magnetic field is generated by motions taking place within our planet's liquid metal outer core. Variations of this core-generated field thus provide a unique means of probing the dynamics taking place in the deepest reaches of the Earth. In this contribution we present a new high resolution model of the core-generated magnetic field, and its recent time changes, derived from a dataset that includes more two years of observations from the Swarm mission. Resulting inferences regarding the underlying core flow, its dynamics, and the nature of the geodynamo process will be discussed. The CHAOS-6 geomagnetic field model, covering the interval 1999-2016, is derived from magnetic data collected by the three Swarm missions, as well as the earlier CHAMP and Oersted satellites, and monthly means data collected from 160 ground observatories. Advantage is taken of the constellation aspect of the Swarm mission by ingesting both scalar and vector field differences along-track and across track between the lower pair of Swarm satellites. The internal part of the model consists of a spherical harmonic (SH) expansion, time-dependent for degrees 20 and below. The model coefficients are estimated using a regularized, iteratively reweighted, least squares scheme involving Huber weights. At Earth's surface, CHAOS-6 shows evidence for positive acceleration of the field intensity in 2015 over a broad area around longitude 90deg E that is also seen at ground observatories such as Novosibirsk. At the core surface, we are able to map the secular variation (linear trend in the magnetic field) up to SH degree 16. The radial field acceleration at the core surface in 2015 is found be largest at low latitudes under the India-South East Asia region and under the region of northern South America, as well as at high northern latitudes under Alaska and Siberia. Surprisingly, there is also evidence for some acceleration in the central Pacific region, for example near Hawaii, where radial field SA is observed either side of a jerk event in 2014. On the other hand, little activity has occurred over the past 17 years in the Southern polar region. Maps of the underlying core flow can be derived assuming that field changes result from advective processes, and taking into account the organizing influence of the Coriolis force. The dominant large-scale flow feature is found to be a planetary-scale, anti-cyclonic, gyre centered on the Atlantic hemisphere. In addition to this gyre we find evidence for time-dependent eddies at mid-latitudes and oscillating, non-axisymmetric, jets in the azimuthal direction at low latitudes.
Mapping and Engineering Functional Domains of the Assembly Activating Protein of Adeno-Associated Viruses.

PubMed

Tse, Longping V; Moller-Tank, Sven; Meganck, Rita M; Asokan, Aravind

2018-04-25

Adeno-associated viruses (AAV) encode a unique assembly activating protein (AAP) within their genome that is essential for capsid assembly. Studies to date have focused on establishing the role of AAP as a chaperone that mediates stability, nucleolar transport, and assembly of AAV capsid proteins. Here, we map structure-function correlates of AAP using secondary structure analysis followed by deletion and substitutional mutagenesis of specific domains, namely, the hydrophobic N-terminal domain (HR), conserved core (CC), proline-rich region (PRR), threonine/serine rich region (T/S) and basic region (BR). First, we establish that the centrally located PRR and T/S regions are flexible linker domains that can either be deleted completely or replaced by heterologous functional domains that enable ancillary functions such as fluorescent imaging or increased AAP stability. We also demonstrate that the C-terminal BR domains can be substituted with heterologous nuclear or nucleolar localization sequences that display varying ability to support AAV capsid assembly. Further, by replacing the BR domain with immunoglobulin (IgG) Fc domains, we assessed AAP complexation with AAV capsid subunits and demonstrate that the hydrophobic region (HR) and the conserved core (CC) in the AAP N-terminus are the sole determinants for viral protein (VP) recognition. However, VP recognition alone is not sufficient for capsid assembly. Our study sheds light on the modular structure-function correlates of AAP and provides multiple approaches to engineer AAP that might prove useful towards understanding and controlling AAV capsid assembly. Importance: Adeno-associated viruses (AAV) encode a unique assembly activating protein (AAP) within their genome that is essential for capsid assembly. Understanding how AAP acts as a chaperone for viral assembly could help improve efficiency and potentially control this process. Our studies reveal that AAP has a modular architecture, with each module playing a distinct role and can be engineered for carrying out new functions. Copyright © 2018 American Society for Microbiology.
Inhibitory Control as a Core Process of Creative Problem Solving and Idea Generation from Childhood to Adulthood

ERIC Educational Resources Information Center

Cassotti, Mathieu; Agogué, Marine; Camarda, Anaëlle; Houdé, Olivier; Borst, Grégoire

2016-01-01

Developmental cognitive neuroscience studies tend to show that the prefrontal brain regions (known to be involved in inhibitory control) are activated during the generation of creative ideas. In the present article, we discuss how a dual-process model of creativity--much like the ones proposed to account for decision making and reasoning--could…
Education in Asia: A Comparative Study of Cost and Financing. World Bank Regional and Sectoral Studies.

ERIC Educational Resources Information Center

Tan, Jee-Peng; Mingat, Alain

Data analyzed in this study are drawn from varied sources including documents provided by governments in the context of the World Bank's operational activity. The data on a basic set of indicators were assembled for a core of 11 Asian countries (Bangladesh, China, India, Indonesia, Korea, Malaysia, Nepal, Papua New Guinea, the Philippines, Sri…
Caudal Nucleus Accumbens Core Is Critical in the Regulation of Cue-Elicited Approach-Avoidance Decisions

PubMed Central

Hamel, Laurie; Thangarasa, Tharshika; Samadi, Osai

2017-01-01

The nucleus accumbens (NAc) is thought to be a site of integration of positively and negatively valenced information and action selection. Functional differentiation in valence processing has previously been found along the rostrocaudal axis of the shell region of the NAc in assessments of unconditioned motivation. Given that the core region of the NAc has been implicated in the elicitation of motivated behavior in response to conditioned cues, we sought to assess the role of caudal, intermediate, and rostral sites within this subregion in cue-elicited approach-avoidance decisions. Rats were trained to associate visuo-tactile cues with appetitive, aversive, and neutral outcomes. Following the successful acquisition of the cue-outcome associations, rats received microinfusions of GABAA and GABAB receptor agonists (muscimol/baclofen) or saline into the caudal, intermediate, or rostral NAc core and were then exposed to a superimposition of appetitively and aversively valenced cues versus neutral cues in a “conflict test,” as well as to the appetitive versus neutral cues, and aversive cues versus neutral cues, in separate conditioned preference/avoidance tests. Disruption of activity in the intermediate to caudal parts of the NAc core resulted in a robust avoidance bias in response to motivationally conflicting cues, as well as a potentiated avoidance of aversive cues as compared with control animals, coupled with an attenuated conditioned preference for the appetitive cue. These results suggest that the caudal NAc core may have the capacity to exert bidirectional control over appetitively and aversively motivated responses to valence signals. PMID:28275709
Ancient deep-sea sponge grounds on the Flemish Cap and Grand Bank, northwest Atlantic.

PubMed

Murillo, F J; Kenchington, E; Lawson, J M; Li, G; Piper, D J W

Recent studies on deep-sea sponges have focused on mapping contemporary distributions while little work has been done to map historical distributions; historical distributions can provide valuable information on the time frame over which species have co-evolved and may provide insight into the reasons for their persistence or decline. Members of the sponge family Geodiidae are dominant members of deep-sea sponge assemblages in the northwestern Atlantic. They possess unique spicules called sterrasters, which undergo little transport in sediment and can therefore indicate the Geodiidae sponge historical presence when found in sediment cores. This study focuses on the slopes of Flemish Cap and Grand Bank, important fishing grounds off the coast of Newfoundland, Canada, in international waters. Sediment cores collected in 2009 and 2010 were visually inspected for sponge spicules. Cores containing spicules were sub-sampled and examined under a light microscope for the presence of sterrasters. These cores were also dated using X-radiographs and grouped into five time categories based on known sediment horizons, ranging from 17,000 years BP to the present. Chronological groupings identified Geodiidae sponges in four persistent sponge grounds. The oldest sterrasters were concentrated in the eastern region of the Flemish Cap and on the southeastern slope of the Grand Bank. Opportunistic sampling of a long core in the southeastern region of the Flemish Cap showed the continuous presence of sponge spicules to more than 130 ka BP. Our results indicate that the geodiids underwent a significant range expansion following deglaciation, and support a contemporary distribution that is not shaped by recent fishing activity.
Dispersion characteristics of plasmonic waveguides for THz waves

NASA Astrophysics Data System (ADS)

Markides, Christos; Viphavakit, Charusluk; Themistos, Christos; Komodromos, Michael; Kalli, Kyriacos; Quadir, Anita; Rahman, Azizur

2013-05-01

Today there is an increasing surge in Surface Plasmon based research and recent studies have shown that a wide range of plasmon-based optical elements and techniques have led to the development of a variety of active switches, passive waveguides, biosensors, lithography masks, to name just a few. The Terahertz (THz) frequency region of the electromagnetic spectrum is located between the traditional microwave spectrum and the optical frequencies, and offers a significant scientific and technological potential in many fields, such as in sensing, in imaging and in spectroscopy. Waveguiding in this intermediate spectral region is a major challenge. Amongst the various THz waveguides suggested, the metal-clad waveguides supporting surface plasmon modes waves and specifically hollow core structures, coated with insulating material are showing the greatest promise as low-loss waveguides for their use in active components and as well as passive waveguides. The H-field finite element method (FEM) based full-vector formulation is used to study the vectorial modal field properties and the complex propagation characteristics of Surface Plasmon modes of a hollow-core dielectric coated rectangular waveguide structure. Additionally, the finite difference time domain (FDTD) method is used to estimate the dispersion parameters and the propagation loss of the rectangular waveguide.
Ex-vessel neutron dosimetry analysis for westinghouse 4-loop XL pressurized water reactor plant using the RadTrack{sup TM} Code System with the 3D parallel discrete ordinates code RAPTOR-M3G

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chen, J.; Alpan, F. A.; Fischer, G.A.

2011-07-01

Traditional two-dimensional (2D)/one-dimensional (1D) SYNTHESIS methodology has been widely used to calculate fast neutron (>1.0 MeV) fluence exposure to reactor pressure vessel in the belt-line region. However, it is expected that this methodology cannot provide accurate fast neutron fluence calculation at elevations far above or below the active core region. A three-dimensional (3D) parallel discrete ordinates calculation for ex-vessel neutron dosimetry on a Westinghouse 4-Loop XL Pressurized Water Reactor has been done. It shows good agreement between the calculated results and measured results. Furthermore, the results show very different fast neutron flux values at some of the former plate locationsmore » and elevations above and below an active core than those calculated by a 2D/1D SYNTHESIS method. This indicates that for certain irregular reactor internal structures, where the fast neutron flux has a very strong local effect, it is required to use a 3D transport method to calculate accurate fast neutron exposure. (authors)« less
NEUTRONIC REACTOR

DOEpatents

Hurwitz, H. Jr.; Brooks, H.; Mannal, C.; Payne, J.H.; Luebke, E.A.

1959-03-24

A reactor of the heterogeneous, liquid cooled type is described. This reactor is comprised of a central region of a plurality of vertically disposed elongated tubes surrounded by a region of moderator material. The central region is comprised of a central core surrounded by a reflector region which is surrounded by a fast neutron absorber region, which in turn is surrounded by a slow neutron absorber region. Liquid sodium is used as the primary coolant and circulates through the core which contains the fuel elements. Control of the reactor is accomplished by varying the ability of the reflector region to reflect neutrons back into the core of the reactor. For this purpose the reflector is comprised of moderator and control elements having varying effects on reactivity, the control elements being arranged and actuated by groups to give regulation, shim, and safety control.
A Survey of Nanoflare Properties in Solar Active Regions

NASA Astrophysics Data System (ADS)

Viall, N. M.; Klimchuk, J. A.

2013-12-01

We investigate coronal heating using a systematic technique to analyze the properties of nanoflares in active regions (AR). Our technique computes cooling times, or time-lags, on a pixel-by-pixel basis using data taken with the Atmospheric Imaging Assembly onboard the Solar Dynamics Observatory. Our technique has the advantage that it allows us to analyze all of the coronal AR emission, including the so-called diffuse emission. We recently presented results using this time-lag analysis on NOAA AR 11082 (Viall & Klimchuk 2012) and found that the majority of the pixels contained cooling plasma along their line of sight, consistent with impulsive coronal nanoflare heating. Additionally, our results showed that the nanoflare energy is stronger in the AR core and weaker in the active region periphery. Are these results representative of the nanoflare properties exhibited in the majority of ARs, or is AR 11082 unique? Here we present the time-lag results for a survey of ARs and show that these nanoflare patterns are born out in other active regions, for a range of ages, magnetic complexity, and total unsigned magnetic flux. Other aspects of the nanoflare properties, however, turn out to be dependent on certain AR characteristics.

SDSS-IV MaNGA: the spatial distribution of star formation and its dependence on mass, structure, and environment

NASA Astrophysics Data System (ADS)

Spindler, Ashley; Wake, David; Belfiore, Francesco; Bershady, Matthew; Bundy, Kevin; Drory, Niv; Masters, Karen; Thomas, Daniel; Westfall, Kyle; Wild, Vivienne

2018-05-01

We study the spatially resolved star formation of 1494 galaxies in the SDSS-IV MaNGA Survey. Star formation rates (SFRs) are calculated using a two-step process, using H α in star-forming regions and Dn4000 in regions identified as active galactic nucleus/low-ionization (nuclear) emission region [AGN/LI(N)ER] or lineless. The roles of secular and environmental quenching processes are investigated by studying the dependence of the radial profiles of specific star formation rate on stellar mass, galaxy structure, and environment. We report on the existence of `centrally suppressed' galaxies, which have suppressed Specific Star Formation Rate (SSFR) in their cores compared to their discs. The profiles of centrally suppressed and unsuppressed galaxies are distributed in a bimodal way. Galaxies with high stellar mass and core velocity dispersion are found to be much more likely to be centrally suppressed than low-mass galaxies, and we show that this is related to morphology and the presence of AGN/LI(N)ER like emission. Centrally suppressed galaxies also display lower star formation at all radii compared to unsuppressed galaxies. The profiles of central and satellite galaxies are also compared, and we find that satellite galaxies experience lower specific star formation rates at all radii than central galaxies. This uniform suppression could be a signal of the stripping of hot halo gas in the process known as strangulation. We find that satellites are not more likely to be suppressed in their cores than centrals, indicating that the core suppression is an entirely internal process. We find no correlation between the local environment density and the profiles of star formation rate surface density.
Late Holocene Environmental Changes from NY-NJ Estuaries

NASA Technical Reports Server (NTRS)

Peteet, Dorothy M.

2000-01-01

High-resolution records of environmental change in the lower Hudson estuary are quite rare. We present preliminary data from several marshes in the New York- New Jersey region in order to understand the late Holocene environmental history of this region. Our project includes salt marsh cores from Hackensack, Piermont, Staten Island, and Jamaica Bay. Our preliminary research has focused on a 11.15 m sediment core from Piermont Marsh, New York (40 deg N, 74 deg W) in an attempt to document the Holocene environmental history of the region. Lithology, loss -on -ignition (LOI), pollen, plant macrofossils, charcoal, and foraminifera were analyzed. Core lithology consists of peat, silts, and clays that vary in color and texture. The base of the core is AMS C-14 dated to 4190 yr BP. Preliminary low-resolution analysis of the core to date includes sampling at the 1-meter interval throughout the core. LOI of the sediments ranges from 1% to 85%. Average rate of deposition is about .26 cm/yr. Major changes in pollen percentages are visible throughout the core.
Wide-field Infrared Polarimetry of the ρ Ophiuchi Cloud Core

NASA Astrophysics Data System (ADS)

Kwon, Jungmi; Tamura, Motohide; Hough, James H.; Nakajima, Yasushi; Nishiyama, Shogo; Kusakabe, Nobuhiko; Nagata, Tetsuya; Kandori, Ryo

2015-09-01

We conducted wide and deep simultaneous JHKs-band imaging polarimetry of the ρ Ophiuchi cloud complex. Aperture polarimetry in the JHKs band was conducted for 2136 sources in all three bands, of which 322 sources have significant polarizations in all the JHKs bands and have been used for a discussion of the core magnetic fields. There is a positive correlation between degrees of polarization and H - Ks color up to H - Ks ≈ 3.5. The magnetic field structures in the core region are revealed up to at least AV ≈ 47 mag and are unambiguously defined in each sub-region (core) of Oph-A, Oph-B, Oph-C, Oph-E, Oph-F, and Oph-AC. Their directions, degrees of polarization, and polarization efficiencies differ but their changes are gradual; thus, the magnetic fields appear to be connected from core to core, rather than as a simple overlap of the different cloud core components. Comparing our results with the large-scale field structures obtained from previous optical polarimetric studies, we suggest that the magnetic field structures in the core were distorted by the cluster formation in this region, which may have been induced by shock compression due to wind/radiation from the Scorpius-Centaurus association.
On the spatial distributions of dense cores in Orion B

NASA Astrophysics Data System (ADS)

Parker, Richard J.

2018-05-01

We quantify the spatial distributions of dense cores in three spatially distinct areas of the Orion B star-forming region. For L1622, NGC 2068/NGC 2071, and NGC 2023/NGC 2024, we measure the amount of spatial substructure using the Q-parameter and find all three regions to be spatially substructured (Q < 0.8). We quantify the amount of mass segregation using ΛMSR and find that the most massive cores are mildly mass segregated in NGC 2068/NGC 2071 (ΛMSR ˜ 2), and very mass segregated in NGC 2023/NGC 2024 (Λ _MSR = 28^{+13}_{-10} for the four most massive cores). Whereas the most massive cores in L1622 are not in areas of relatively high surface density, or deeper gravitational potentials, the massive cores in NGC 2068/NGC 2071 and NGC 2023/NGC 2024 are significantly so. Given the low density (10 cores pc-2) and spatial substructure of cores in Orion B, the mass segregation cannot be dynamical. Our results are also inconsistent with simulations in which the most massive stars form via competitive accretion, and instead hint that magnetic fields may be important in influencing the primordial spatial distributions of gas and stars in star-forming regions.
Analysis of interstellar cloud structure based on IRAS images

NASA Technical Reports Server (NTRS)

Scalo, John M.

1992-01-01

The goal of this project was to develop new tools for the analysis of the structure of densely sampled maps of interstellar star-forming regions. A particular emphasis was on the recognition and characterization of nested hierarchical structure and fractal irregularity, and their relation to the level of star formation activity. The panoramic IRAS images provided data with the required range in spatial scale, greater than a factor of 100, and in column density, greater than a factor of 50. In order to construct densely sampled column density maps of star-forming clouds, column density images of four nearby cloud complexes were constructed from IRAS data. The regions have various degrees of star formation activity, and most of them have probably not been affected much by the disruptive effects of young massive stars. The largest region, the Scorpius-Ophiuchus cloud complex, covers about 1000 square degrees (it was subdivided into a few smaller regions for analysis). Much of the work during the early part of the project focused on an 80 square degree region in the core of the Taurus complex, a well-studied region of low-mass star formation.
Topography at the inner core boundary

NASA Astrophysics Data System (ADS)

Lasbleis, M.; Forquenot, Q.; Deguen, R.

2017-12-01

Topography at the inner core boundary has been proposed to explain surprising seismic observations of some regional studies. Such observations are still debatted, and numerical values of possible inner core topography have been proposed ranging from no topography to "inner core mountains" (10km heigth over lengthscales of 20km, as in Dai et al. 2012). The inner core boundary is a peculiar boundary, as it is the place where the iron alloy constituting the core freezes. The existence of a significant topography on such a boundary is possible, but unlikely. At thermodynamic equilibrium, no topography is expected, as any material above the equilibrium radius would have melted and any below would have freezed. However, mechanical forcing may push the system out of equilibrium. Dynamical topography could be forced by convective flows in the inner core or by outer core heterogeneities. A topography induced by outer core convection would be short-lived when compared to geodynamical processes in the bulk of the inner core (τ ≈ 10-100 Myears), but long-lived compared to observations. Here, we would like to give a geodynamical perspective over inner core topography. We constrain plausible amplitude of inner core topography, and discuss the implications for seismic observations. We consider topography created by viscous flows in the bulk of the inner core and by variations of growth rate on regional lengthscale due to outer core convection. This approach allows us to consider both internal and external forcings on the topography. We treat topography forcings as stochastic processes, and calculate the probability of observing a given topography. Based on preliminary results, the high values for observed topography can not be interpreted as a normal behavior of core dynamics. If confirmed, the regions are likely to be anomalous and originated from outliers in the distribution of stochastic processes.
Architecture of the Yeast RNA Polymerase II Open Complex and Regulation of Activity by TFIIF

PubMed Central

Fishburn, James

2012-01-01

To investigate the function and architecture of the open complex state of RNA polymerase II (Pol II), Saccharomyces cerevisiae minimal open complexes were assembled by using a series of heteroduplex HIS4 promoters, TATA binding protein (TBP), TFIIB, and Pol II. The yeast system demonstrates great flexibility in the position of active open complexes, spanning 30 to 80 bp downstream from TATA, consistent with the transcription start site scanning behavior of yeast Pol II. TFIIF unexpectedly modulates the activity of the open complexes, either repressing or stimulating initiation. The response to TFIIF was dependent on the sequence of the template strand within the single-stranded bubble. Mutations in the TFIIB reader and linker region, which were inactive on duplex DNA, were suppressed by the heteroduplex templates, showing that a major function of the TFIIB reader and linker is in the initiation or stabilization of single-stranded DNA. Probing of the architecture of the minimal open complexes with TFIIB-FeBABE [TFIIB–p-bromoacetamidobenzyl–EDTA-iron(III)] derivatives showed that the TFIIB core domain is surprisingly positioned away from Pol II, and the addition of TFIIF repositions the TFIIB core domain to the Pol II wall domain. Together, our results show an unexpected architecture of minimal open complexes and the regulation of activity by TFIIF and the TFIIB core domain. PMID:22025674
Functional MRI of the vocalization-processing network in the macaque brain

PubMed Central

Ortiz-Rios, Michael; Kuśmierek, Paweł; DeWitt, Iain; Archakov, Denis; Azevedo, Frederico A. C.; Sams, Mikko; Jääskeläinen, Iiro P.; Keliris, Georgios A.; Rauschecker, Josef P.

2015-01-01

Using functional magnetic resonance imaging in awake behaving monkeys we investigated how species-specific vocalizations are represented in auditory and auditory-related regions of the macaque brain. We found clusters of active voxels along the ascending auditory pathway that responded to various types of complex sounds: inferior colliculus (IC), medial geniculate nucleus (MGN), auditory core, belt, and parabelt cortex, and other parts of the superior temporal gyrus (STG) and sulcus (STS). Regions sensitive to monkey calls were most prevalent in the anterior STG, but some clusters were also found in frontal and parietal cortex on the basis of comparisons between responses to calls and environmental sounds. Surprisingly, we found that spectrotemporal control sounds derived from the monkey calls (“scrambled calls”) also activated the parietal and frontal regions. Taken together, our results demonstrate that species-specific vocalizations in rhesus monkeys activate preferentially the auditory ventral stream, and in particular areas of the antero-lateral belt and parabelt. PMID:25883546
Potential Impacts of Climate Change in the Great Lakes Region

NASA Astrophysics Data System (ADS)

Winkler, J. A.

2011-12-01

Climate change is projected to have substantial impacts in the Great Lakes region of the United States. One intent of this presentation is to introduce the Great Lakes Integrated Sciences and Assessments Center (GLISA), a recently-funded NOAA RISA center. The goals and unique organizational structure of GLISA will be described along with core activities that support impact and assessment studies in the region. Additionally, observed trends in temperature, precipitation including lake effect snowfall, and lake temperatures and ice cover will be summarized for the Great Lakes region, and vulnerabilities to, and potential impacts of, climate change will be surveyed for critical natural and human systems. These include forest ecosystems, water resources, traditional and specialized agriculture, and tourism/recreation. Impacts and vulnerabilities unique to the Great Lakes region are emphasized.
Estimating the spatial distribution of soil organic matter density and geochemical properties in a polygonal shaped Arctic Tundra using core sample analysis and X-ray computed tomography

NASA Astrophysics Data System (ADS)

Soom, F.; Ulrich, C.; Dafflon, B.; Wu, Y.; Kneafsey, T. J.; López, R. D.; Peterson, J.; Hubbard, S. S.

2016-12-01

The Arctic tundra with its permafrost dominated soils is one of the regions most affected by global climate change, and in turn, can also influence the changing climate through biogeochemical processes, including greenhouse gas release or storage. Characterization of shallow permafrost distribution and characteristics are required for predicting ecosystem feedbacks to a changing climate over decadal to century timescales, because they can drive active layer deepening and land surface deformation, which in turn can significantly affect hydrological and biogeochemical responses, including greenhouse gas dynamics. In this study, part of the Next-Generation Ecosystem Experiment (NGEE-Arctic), we use X-ray computed tomography (CT) to estimate wet bulk density of cores extracted from a field site near Barrow AK, which extend 2-3m through the active layer into the permafrost. We use multi-dimensional relationships inferred from destructive core sample analysis to infer organic matter density, dry bulk density and ice content, along with some geochemical properties from nondestructive CT-scans along the entire length of the cores, which was not obtained by the spatially limited destructive laboratory analysis. Multi-parameter cross-correlations showed good agreement between soil properties estimated from CT scans versus properties obtained through destructive sampling. Soil properties estimated from cores located in different types of polygons provide valuable information about the vertical distribution of soil and permafrost properties as a function of geomorphology.
Facile construction of vertically aligned EuS-ZnO hybrid core shell nanorod arrays for visible light driven photocatalytic properties

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ranjith, K. S.; Kumar, D. Ranjith; Kumar, R. T. Rajendra, E-mail: rtrkumar@buc.edu.in

2015-06-24

We demonstrated the development of coupled semiconductor in the form of hybrid heterostructures for significant advancement in catalytic functional materials. In this article, we report the preparation of vertically aligned core shell ZnO-EuS nanorod photocatalyst arrays by a simple chemical solution process followed by sulfudation process. The XRD pattern confirmed formation of the hexagonal wurtzite structure of ZnO and cubic nature of the EuS. Cross sectional FESEM images show vertical rod array structure, and the size of the nanorods ranges from 80 to 120 nm. UV-Vis DRS spectra showed that the optical absorption of ZnO was significantly enhanced to the visiblemore » region by modification with EuS surfaces. TEM study confirmed that the surface of ZnO was drastically improved by the modification with EuS nanoparticle. The catalytic activity of EuS−ZnO core shell nanorod arrays were evaluated by the photodegradation of Methylene Blue (MB) dye under visible irradiation. The results revealed that the photocatalytic activity of EuS−ZnO was much higher than that of ZnO under natural sunlight. EuS−ZnO was found to be stable and reusable without appreciable loss of catalytic activity up to four consecutive cycles.« less
Structure of the Newcastle disease virus hemagglutinin-neuraminidase (HN) ectodomain reveals a four-helix bundle stalk

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yuan, Ping; Swanson, Kurt A.; Leser, George P.

2014-10-02

The paramyxovirus hemagglutinin-neuraminidase (HN) protein plays multiple roles in viral entry and egress, including binding to sialic acid receptors, activating the fusion (F) protein to activate membrane fusion and viral entry, and cleaving sialic acid from carbohydrate chains. HN is an oligomeric integral membrane protein consisting of an N-terminal transmembrane domain, a stalk region, and an enzymatically active neuraminidase (NA) domain. Structures of the HN NA domains have been solved previously; however, the structure of the stalk region has remained elusive. The stalk region contains specificity determinants for F interactions and activation, underlying the requirement for homotypic F and HNmore » interactions in viral entry. Mutations of the Newcastle disease virus HN stalk region have been shown to affect both F activation and NA activities, but a structural basis for understanding these dual affects on HN functions has been lacking. Here, we report the structure of the Newcastle disease virus HN ectodomain, revealing dimers of NA domain dimers flanking the N-terminal stalk domain. The stalk forms a parallel tetrameric coiled-coil bundle (4HB) that allows classification of extensive mutational data, providing insight into the functional roles of the stalk region. Mutations that affect both F activation and NA activities map predominantly to the 4HB hydrophobic core, whereas mutations that affect only F-protein activation map primarily to the 4HB surface. Two of four NA domains interact with the 4HB stalk, and residues at this interface in both the stalk and NA domain have been implicated in HN function.« less
Human Topoisomerase I C-Terminal Domain Fragment Containing the Active Site Tyrosine is a Molten Globule: Implication for the Formation of Competent Productive Complex

PubMed Central

Punchihewa, Chandanamali; Dai, Jixun; Carver, Megan; Yang, Danzhou

2007-01-01

Human topoisomerase I (topo I) is an essential cellular enzyme that relaxes DNA supercoiling. The 6.3 kDa C-terminal domain of topo I contains the active site tyrosine (Tyr723) but lacks enzymatic activity by itself. Activity can be fully reconstituted when the C-terminal is associated with the 56 kDa core domain. Even though several crystal structures of topo I/DNA complexes are available, crystal structures of the free topo I protein or its individual domain fragments have been difficult to obtain. In this report we analyze the human topo I C-terminal domain structure using a variety of biophysical methods. Our results indicate that this fragment protein (topo6.3) appears to be in a molten globule state. It appears to have a native-like tertiary fold that contains a large population of α-helix secondary structure and extensive surface hydrophobic regions. Topo6.3 is known to be readily activated with the association of the topo I core domain, and the molten globule state of topo6.3 is likely to be an energy-favorable conformation for the free topo I C-terminal domain protein. The structural fluctuation and plasticity may represent an efficient mechanism in the topo I functional pathway, where the flexibility aids in the complementary association with the core domain and in the formation of a fully productive topo I complex. PMID:17434318
Exposure to subliminal arousing stimuli induces robust activation in the amygdala, hippocampus, anterior cingulate, insular cortex and primary visual cortex: a systematic meta-analysis of fMRI studies.

PubMed

Brooks, S J; Savov, V; Allzén, E; Benedict, C; Fredriksson, R; Schiöth, H B

2012-02-01

Functional Magnetic Resonance Imaging (fMRI) demonstrates that the subliminal presentation of arousing stimuli can activate subcortical brain regions independently of consciousness-generating top-down cortical modulation loops. Delineating these processes may elucidate mechanisms for arousal, aberration in which may underlie some psychiatric conditions. Here we are the first to review and discuss four Activation Likelihood Estimation (ALE) meta-analyses of fMRI studies using subliminal paradigms. We find a maximum of 9 out of 12 studies using subliminal presentation of faces contributing to activation of the amygdala, and also a significantly high number of studies reporting activation in the bilateral anterior cingulate, bilateral insular cortex, hippocampus and primary visual cortex. Subliminal faces are the strongest modality, whereas lexical stimuli are the weakest. Meta-analyses independent of studies using Regions of Interest (ROI) revealed no biasing effect. Core neuronal arousal in the brain, which may be at first independent of conscious processing, potentially involves a network incorporating primary visual areas, somatosensory, implicit memory and conflict monitoring regions. These data could provide candidate brain regions for the study of psychiatric disorders associated with aberrant automatic emotional processing. Copyright © 2011 Elsevier Inc. All rights reserved.
Mapping lexical-semantic networks and determining hemispheric language dominance: Do task design, sex, age, and language performance make a difference?

PubMed

Chang, Yu-Hsuan A; Javadi, Sogol S; Bahrami, Naeim; Uttarwar, Vedang S; Reyes, Anny; McDonald, Carrie R

2018-04-01

Blocked and event-related fMRI designs are both commonly used to localize language networks and determine hemispheric dominance in research and clinical settings. We compared activation profiles on a semantic monitoring task using one of the two designs in a total of 43 healthy individual to determine whether task design or subject-specific factors (i.e., age, sex, or language performance) influence activation patterns. We found high concordance between the two designs within core language regions, including the inferior frontal, posterior temporal, and basal temporal region. However, differences emerged within inferior parietal cortex. Subject-specific factors did not influence activation patterns, nor did they interact with task design. These results suggest that despite high concordance within perisylvian regions that are robust to subject-specific factors, methodological differences between blocked and event-related designs may contribute to parietal activations. These findings provide important information for researchers incorporating fMRI results into meta-analytic studies, as well as for clinicians using fMRI to guide pre-surgical planning. Copyright © 2018 Elsevier Inc. All rights reserved.
The Phospholipase C Isozymes and Their Regulation

PubMed Central

Gresset, Aurelie; Sondek, John

2013-01-01

The physiological effects of many extracellular neurotransmitters, hormones, growth factors, and other stimuli are mediated by receptor-promoted activation of phospholipase C (PLC) and consequential activation of inositol lipid signaling pathways. These signaling responses include the classically described conversion of phosphatidylinositol(4,5)P2 to the Ca2+-mobilizing second messenger inositol(1,4,5)P3 and the protein kinase C-activating second messenger diacylglycerol as well as alterations in membrane association or activity of many proteins that harbor phosphoinositide binding domains. The 13 mammalian PLCs elaborate a minimal catalytic core typified by PLC-δ to confer multiple modes of regulation of lipase activity. PLC-β isozymes are activated by Gαq- and Gβγ-subunits of heterotrimeric G proteins, and activation of PLC-γ isozymes occurs through phosphorylation promoted by receptor and non-receptor tyrosine kinases. PLC-ε and certain members of the PLC-β and PLC-γ subclasses of isozymes are activated by direct binding of small G proteins of the Ras, Rho, and Rac subfamilies of GTPases. Recent high resolution three dimensional structures together with biochemical studies have illustrated that the X/Y linker region of the catalytic core mediates autoinhibition of most if not all PLC isozymes. Activation occurs as a consequence of removal of this autoinhibition. PMID:22403074
Hepatitis C Virus Core Mutations Associated with False-Negative Serological Results for Genotype 3a Core Antigen

PubMed Central

Dunford, Linda; Freitas, Ines; Holder, Paul; Nguyen, Lan Anh; O'Gorman, Joanne; Connell, Jeff; Carr, Michael; Hall, William; De Gascun, Cillian

2015-01-01

Genetic characterization of the genotype 3a (GT3a) hepatitis C virus (HCV) core region from HCV core antigen (HCVcAg)-negative/RNA-positive cases and HCVcAg-positive/RNA-positive controls identified significant associations between the substitutions A48T and T49A/P and failure to detect HCVcAg (P < 0.05). Polymorphisms at residues 48 and 49 in the core protein are present across all major epidemic and endemic GTs. These findings have implications for HCV diagnosis, particularly in low-income regions in which GT3a HCV is endemic. PMID:25994168
EVOLUTION OF MAGNETIC FIELD AND ENERGY IN A MAJOR ERUPTIVE ACTIVE REGION BASED ON SDO/HMI OBSERVATION

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sun Xudong; Hoeksema, J. Todd; Liu, Yang

We report the evolution of the magnetic field and its energy in NOAA active region 11158 over five days based on a vector magnetogram series from the Helioseismic and Magnetic Imager (HMI) on board the Solar Dynamic Observatory (SDO). Fast flux emergence and strong shearing motion led to a quadrupolar sunspot complex that produced several major eruptions, including the first X-class flare of Solar Cycle 24. Extrapolated nonlinear force-free coronal fields show substantial electric current and free energy increase during early flux emergence near a low-lying sigmoidal filament with a sheared kilogauss field in the filament channel. The computed magneticmore » free energy reaches a maximum of {approx}2.6 Multiplication-Sign 10{sup 32} erg, about 50% of which is stored below 6 Mm. It decreases by {approx}0.3 Multiplication-Sign 10{sup 32} erg within 1 hr of the X-class flare, which is likely an underestimation of the actual energy loss. During the flare, the photospheric field changed rapidly: the horizontal field was enhanced by 28% in the core region, becoming more inclined and more parallel to the polarity inversion line. Such change is consistent with the conjectured coronal field 'implosion' and is supported by the coronal loop retraction observed by the Atmospheric Imaging Assembly (AIA). The extrapolated field becomes more 'compact' after the flare, with shorter loops in the core region, probably because of reconnection. The coronal field becomes slightly more sheared in the lowest layer, relaxes faster with height, and is overall less energetic.« less
Search for continuous paleoclimatic record in Holocene lacustrine sediments from Lake District, Chile (40°S)

NASA Astrophysics Data System (ADS)

Bertrand, S.; Fagel, N.

2003-04-01

Our aim is to reconstruct a continuous Holocene climatic evolution related to ENSO variability in southern Chile. We focus on the sedimentary infilling of two glacial lakes from the Lake District Area (38-40°S). The preliminar sedimentological analysis must allow to define the key-site and the best palaeoclimatic proxies. This area, at the foothill of the Cordillera de Los Andes, has been affected by an intense Quaternary volcanic activity and by several historical earthquakes (e.g., Valdivia 1960). After preliminary seismic investigation, four cores were recovered in two lakes selected at the two ends of a N-S transect. (1) Icalma lake (12 km2, 38°S) is located in the Cordillera de Los Andes at an elevation of 1150m and results of the infilling of a glacial umbilic. The two 8m sediment cores consist of an alternation of laminated silts and volcanic layers. The sedimentary record is strongly disturbed by numerous seismic or volcanic events. The cumulated volcanogenic-derived material represents up to 50 % of the core length. In particular, the cores record at -4.50m a pumice layer widespread in the watershed and dated at 2900 yr BP. One core contains pluricentrimetric layers of wood accumulation. They could be due to earthquake impact on the vegetational cover in the watershed. An ubiquitous 6cm-thick slump described at -40 cm may be related with the 1960 Valdivia earthquake. (2) On Puyehue lake (164 km2, 40°S, elevation 185 m), two cores (7 and 11m) have been collected in both underflow and interflow sites. The interflow site (PUII) shows a very well laminated sediment, with only small disturbances due to volcanic and seismic activities. This core will be the key-site for the paleoclimatic study. The second core (PUI) is very rich in organic matter. The sediment is strongly destratified by numerous gas bubbles (methane). These characteristics are due to the dense vegetational cover in the watershed and to the core location near the delta of the main river. This preliminary study emphasizes the influence of geodynamic conditions on sedimentology of lacustrine deposits in a geodynamically active region. The contribution of the punctual tectonic and volcanic-derived layers to sediment thickness must be taken into account before calculation of the age-depth model.
Ice Core Records of Recent Northwest Greenland Climate

NASA Astrophysics Data System (ADS)

Osterberg, E. C.; Wong, G. J.; Ferris, D.; Lutz, E.; Howley, J. A.; Kelly, M. A.; Axford, Y.; Hawley, R. L.

2014-12-01

Meteorological station data from NW Greenland indicate a 3oC temperature rise since 1990, with most of the warming occurring in fall and winter. According to remote sensing data, the NW Greenland ice sheet (GIS) and coastal ice caps are responding with ice mass loss and margin retreat, but the cryosphere's response to previous climate variability is poorly constrained in this region. We are developing multi-proxy records (lake sediment cores, ice cores, glacial geologic data, glaciological models) of Holocene climate change and cryospheric response in NW Greenland to improve projections of future ice loss and sea level rise in a warming climate. As part of our efforts to develop a millennial-length ice core paleoclimate record from the Thule region, we collected and analyzed snow pit samples and short firn cores (up to 21 m) from the coastal region of the GIS (2Barrel site; 76.9317o N, 63.1467o W, 1685 m el.) and the summit of North Ice Cap (76.938o N, 67.671o W, 1273 m el.) in 2011, 2012 and 2014. The 2Barrel ice core record has statistically significant relationships with regional spring and fall Baffin Bay sea ice extent, summertime temperature, and annual precipitation. Here we evaluate relationships between the 2014 North Ice Cap firn core glaciochemical record and climate variability from regional instrumental stations and reanalysis datasets. We compare the coastal North Ice Cap record to more inland records from 2Barrel, Camp Century and NEEM to evaluate spatial and elevational gradients in recent NW Greenland climate change.

Assessment of acid leachable trace metals in sediment cores from River Uppanar, Cuddalore, Southeast coast of India.

PubMed

Ayyamperumal, T; Jonathan, M P; Srinivasalu, S; Armstrong-Altrin, J S; Ram-Mohan, V

2006-09-01

An acid leachable technique is employed in core samples (C1, C2 and C3) to develop a baseline data on the sediment quality for trace metals of River Uppanar, Cuddalore, southeast coast of India. Acid leachable metals (Fe, Mn, Cr, Cu, Ni, Co, Pb, Zn and Cd) indicate peak values at the sulphidic phase and enrichment of metals in the surface layers are due to the anthropogenic activities. Association of trace metals with Fe, Mn indicates their adsorption onto Fe-Mn oxyhydroxides and their correlation with S indicate that they are precipitated as metal sulphides. Factor analysis identified three possible types of geochemical associations and the supremacy of trace metals along with Fe, Mn, S and mud supports their geochemical associations. Factor analysis also signifies that anthropogenic activities have affected both the estuarine and fresh water regions of River Uppanar.
Linear Polarization Properties of Parsec-Scale AGN Jets

NASA Astrophysics Data System (ADS)

Pushkarev, Alexander; Kovalev, Yuri; Lister, Matthew; Savolainen, Tuomas; Aller, Margo; Aller, Hugh; Hodge, Mary

2017-12-01

We used 15 GHz multi-epoch Very Long Baseline Array (VLBA) polarization sensitive observations of 484 sources within a time interval 1996--2016 from the MOJAVE program, and also from the NRAO data archive. We have analyzed the linear polarization characteristics of the compact core features and regions downstream, and their changes along and across the parsec-scale active galactic nuclei (AGN) jets. We detected a significant increase of fractional polarization with distance from the radio core along the jet as well as towards the jet edges. Compared to quasars, BL Lacs have a higher degree of polarization and exhibit more stable electric vector position angles (EVPAs) in their core features and a better alignment of the EVPAs with the local jet direction. The latter is accompanied by a higher degree of linear polarization, suggesting that compact bright jet features might be strong transverse shocks, which enhance magnetic field regularity by compression.
Sub-annual North Pacific hydroclimate variability since 1450AD from updated St. Elias ice core isotope and accumulation rate records

NASA Astrophysics Data System (ADS)

Kreutz, K. J.; Campbell, S. W.; Winski, D.; Osterberg, E. C.; Kochtitzky, W. H.; Copland, L.; Dixon, D.; Introne, D.; Medrzycka, D.; Main, B.; Bernsen, S.; Wake, C. P.

2017-12-01

A growing array of high-resolution paleoclimate records from the terrestrial region bordering the Gulf of Alaska (GoA) continues to reveal details about ocean-atmosphere variability in the region during the Common Era. Ice core records from high-elevation ranges in proximity to the GoA provide key information on extratropical hydroclimate, and potential teleconnections to low latitude regions. In particular, stable water isotope and snow accumulation reconstructions from ice cores collected in high precipitation locations are uniquely tied to regional water cycle changes. Here we present new data collected in 2016 and 2017 from the St. Elias Mountains (Eclipse Icefield, Yukon Territories, Canada), including a range of ice core and geophysical measurements. Low- and high-frequency ice penetrating radar data enable detailed mapping of icefield bedrock topography and internal reflector stratigraphy. The 1911 Katmai eruption layer can be clearly traced across the icefield, and tied definitively to the coeval ash layer found in the 345 meter ice core drilled at Eclipse Icefield in 2002. High-resolution radar data are used to map spatial variability in 2015/16 and 2016/17 snow accumulation. Ice velocity data from repeat GPS stake measurements and remote sensing feature tracking reveal a clear divide flow regime on the icefield. Shallow firn/ice cores (20 meters in 2017 and 65 meters in 2016) are used to update the 345 meter ice core drilled at Eclipse Icefield in 2002. We use new algorithm-based layer counting software to improve and provide error estimates on the new ice core chronology, which extends from 2017 to 1450AD. 3D finite element modeling, incorporating all available geophysical data, is used to refine the reconstructed accumulation rate record and account for vertical and horizontal ice flow. Together with high-resolution stable water isotope data, the updated Eclipse record provides detailed, sub-annual resolution data on several aspects of the regional water cycle (e.g., accumulation/precipitation, moisture source and trajectory, coupled ocean/atmosphere variability). We compare the updated Eclipse record with other data in the North Pacific region, including the new Denali 1200-year ice core datasets, to assess regional hydroclimate variability during the Common Era.
Activity ratios in soil contaminated by the source of different reactor condition in the FDNPP accident

NASA Astrophysics Data System (ADS)

Satou, Yukihiko; Sueki, Keisuke; Sasa, Kimikazu; Matsunaka, Tetsuya; Shibayama, Nao; Takahashi, Tsutomu; Kinoshita, Norikazu

2014-05-01

The Fukushima Dai-ichi Nuclear power plant (FDNPP) accident caused radioactive contamination on the surface soil at Fukushima and its adjacent prefectures. Substantial contamination has been found in the northwestern area from the FDNPP, according to the airborne monitoring and ground base survey by the Japanese government. Activity ratios would have characteristic information on emission sources because each relevant reactor had different amount of radionuclide and different activity ratio. The ratios can be used to clarify more detailed source and process in the contamination. We have addressed to consider them in Namie town, northwestern region from the FDNPP. This study focused on the gamma-ray emitting radionuclides of 134Cs, 137Cs, and 110mAg. The activities were decay-corrected as of 11th March, 2011 when all nuclear reactors scrammed. Data of activity ratios by our results and the Japanese official report classified the investigated northwestern region into 3 groups. Ratios of 0.02 for 110mAg/137Cs and 0.90 for 134Cs/137Cs were observed in the northern region of 15 km inside from the FDNPP. On the other hand, two kinds of 110mAg/137Cs ratios of 0.005 and 0.002 were distributed broadly in the region 60 km away from the plant. The 134Cs/137Cs ratio was 0.98 there. The activity ratios of 110mAg/137Cs and 134Cs/137Cs in the northern region from the FDNPP correspond to those of nuclear fuel in Unit 1 according to estimation using the ORIGEN code. The 134Cs/137Cs in the northwestern area from FDNPP agrees with that of Unit 2 and 3. The 110mAg/137Cs ratios of 0.005 and0.002 are 1/5 - 1/10 of the Unit 2 and 3. Official report has announced that discharges of the radionuclides from Unit 2 and 3 occurred on 14th March, 2011. It is known that contamination in the northwestern region from the FDNPP took place on 15th March, 2011. Plausible species for silver in reactor core, metal, and halide etc. have higher boiling point than those species for cesium. The core would be cooled down to lower temperature of the boiling point of silver at the timing contamination occurred. Thus, silver with higher boiling point was not much released than cesium with lower boiling point. The 110mAg/137Cs ratio has served to identify the specific sources of contamination in the northwestern area from the FDNPP.
Optical fiber sensor having an active core

NASA Technical Reports Server (NTRS)

Egalon, Claudio Oliveira (Inventor); Rogowski, Robert S. (Inventor)

1993-01-01

An optical fiber is provided. The fiber is comprised of an active fiber core which produces waves of light upon excitation. A factor ka is identified and increased until a desired improvement in power efficiency is obtained. The variable a is the radius of the active fiber core and k is defined as 2 pi/lambda wherein lambda is the wavelength of the light produced by the active fiber core. In one embodiment, the factor ka is increased until the power efficiency stabilizes. In addition to a bare fiber core embodiment, a two-stage fluorescent fiber is provided wherein an active cladding surrounds a portion of the active fiber core having an improved ka factor. The power efficiency of the embodiment is further improved by increasing a difference between the respective indices of refraction of the active cladding and the active fiber core.
On the thermo-chemical origin of the stratified region at the top of the Earth's core

NASA Astrophysics Data System (ADS)

Nakagawa, Takashi

2018-03-01

I developed a combined model of the thermal and chemical evolution of the Earth's core and investigated its influence on a thermochemically stable region beneath the core-mantle boundary (CMB). The chemical effects of the growing stable region are caused by the equilibrium chemical reaction between silicate and the metallic core. The thermal effects can be characterized by the growth of the sub-isentropic shell, which may have a rapid growth rate compared to that of the chemically stable region. When the present-day CMB heat flow was varied, the origin of the stable region changed from chemical to thermochemical to purely thermal because the rapid growth of the sub-isentropic shell can replace the chemically stable region. Physically reasonable values of the present-day CMB heat flow that can maintain the geodynamo action over 4 billion years should be between 8 and 11 TW. To constrain the thickness of the thermochemically stable region beneath the CMB, the chemical diffusivity is important and should be ∼O(10-8) m2/s to obtain a thickness of the thermochemically stable region beneath the CMB consistent with that inferred from geomagnetic secular variations (140 km). However, the strength of the stable region found in this study is too high to be consistent with the constraint on the stability of the stable region inferred from geomagnetic secular variations.
Structural properties of the promiscuous VP16 activation domain.

PubMed

Jonker, Hendrik R A; Wechselberger, Rainer W; Boelens, Rolf; Folkers, Gert E; Kaptein, Rob

2005-01-25

Herpes simplex virion protein 16 (VP16) contains two strong activation regions that can independently and cooperatively activate transcription in vivo. We have identified the regions and residues involved in the interaction with the human transcriptional coactivator positive cofactor 4 (PC4) and the general transcription factor TFIIB. NMR and biochemical experiments revealed that both VP16 activation regions are required for the interaction and undergo a conformational transition from random coil to alpha-helix upon binding to its target PC4. The interaction is strongly electrostatically driven and the binding to PC4 is enhanced by the presence of its amino-terminal domain. We propose models for binding of VP16 to the core domains of PC4 and TFIIB that are based on two independent docking approaches using NMR chemical shift changes observed in titration experiments. The models are consistent with results from site-directed mutagenesis and provide an explanation for the contribution of both acidic and hydrophobic residues for transcriptional activation by VP16. Both intrinsically unstructured activation domains are attracted to their interaction partner by electrostatic interactions, and adopt an alpha-helical conformation around the important hydrophobic residues. The models showed multiple distinct binding surfaces upon interaction with various partners, providing an explanation for the promiscuous properties, cooperativity, and the high activity of this activation domain.
10 AU scale halo structure around DG Tauri

NASA Technical Reports Server (NTRS)

Chen, Wen P.; Howell, R. R.; Simon, M.; Benson, J. A.

1992-01-01

Lunar occultation observations of the active T Tauri star DG Tau show that in the infrared K band it has a core-halo structure: 20-25 percent of the flux comes from a region 10 AU in extent and the rest from an unresolved core smaller than an AU. These results are consistent with those reported by Leinert et al. from a separate observation. The results obtained here and those of Leinert et al., measuring the intensity distribution projected along directions spanning roughly 40 deg, indicate that the resolved structure is not highly elongated. The extended emission is interpreted as star light scattered by optically thin dust located in a halo surrounding the star.
Near-Surface Profiles of Water Stable Isotope Components and Indicated Transitional History of Ice-Wedge Polygons Near Barrow

NASA Astrophysics Data System (ADS)

Iwahana, G.; Wilson, C.; Newman, B. D.; Heikoop, J. M.; Busey, R.

2017-12-01

Wetlands associated with ice-wedge polygons are commonly distributed across the Arctic Coastal Plain of northern Alaska, a region underlain by continuous permafrost. Micro-topography of the ice-wedge polygons controls local hydrology, and the micro-topography could be altered due to factors such like surface vegetation, wetness, freeze-thaw cycles, and permafrost degradation/aggradation under climate change. Understanding status of the wetlands in the near future is important because it determines biogeochemical cycle, which drives release of greenhouse gases from the ground. However, transitional regime of the ice-wedge polygons under the changing climate is not fully understood. In this study, we analyzed geochemistry of water extracted from frozen soil cores sampled down to about 1m depth in 2014 March at NGEE-Arctic sites in the Barrow Environmental Observatory. The cores were sampled from troughs/rims/centers of five different low-centered or flat-centered polygons. The frozen cores are divided into 5-10cm cores for each location, thawed in sealed plastic bags, and then extracted water was stored in vials. Comparison between the profiles of geochemistry indicated connection of soil water in the active layer at different location in a polygon, while it revealed that distinctly different water has been stored in permafrost layer at troughs/rims/centers of some polygons. Profiles of volumetric water content (VWC) showed clear signals of freeze-up desiccation in the middle of saturated active layers as low VWC anomalies at most sampling points. Water in the active layer and near-surface permafrost was classified into four categories: ice wedge / fresh meteoric / transitional / highly fractionated water. The overall results suggested prolonged separation of water in the active layer at the center of low-centered polygons without lateral connection in water path in the past.
Bidirectional Lipid Droplet Velocities Are Controlled by Differential Binding Strengths of HCV Core DII Protein

PubMed Central

Lyn, Rodney K.; Hope, Graham; Sherratt, Allison R.; McLauchlan, John; Pezacki, John Paul

2013-01-01

Host cell lipid droplets (LD) are essential in the hepatitis C virus (HCV) life cycle and are targeted by the viral capsid core protein. Core-coated LDs accumulate in the perinuclear region and facilitate viral particle assembly, but it is unclear how mobility of these LDs is directed by core. Herein we used two-photon fluorescence, differential interference contrast imaging, and coherent anti-Stokes Raman scattering microscopies, to reveal novel core-mediated changes to LD dynamics. Expression of core protein’s lipid binding domain II (DII-core) induced slower LD speeds, but did not affect directionality of movement on microtubules. Modulating the LD binding strength of DII-core further impacted LD mobility, revealing the temporal effects of LD-bound DII-core. These results for DII-core coated LDs support a model for core-mediated LD localization that involves core slowing down the rate of movement of LDs until localization at the perinuclear region is accomplished where LD movement ceases. The guided localization of LDs by HCV core protein not only is essential to the viral life cycle but also poses an interesting target for the development of antiviral strategies against HCV. PMID:24223760
Regional Differences in Striatal Neuronal Ensemble Excitability Following Cocaine and Extinction Memory Retrieval in Fos-GFP Mice.

PubMed

Ziminski, Joseph J; Sieburg, Meike C; Margetts-Smith, Gabriella; Crombag, Hans S; Koya, Eisuke

2018-03-01

Learned associations between drugs of abuse and the drug administration environment have an important role in addiction. In rodents, exposure to a drug-associated environment elicits conditioned psychomotor activation, which may be weakened following extinction (EXT) learning. Although widespread drug-induced changes in neuronal excitability have been observed, little is known about specific changes within neuronal ensembles activated during the recall of drug-environment associations. Using a cocaine-conditioned locomotion (CL) procedure, the present study assessed the excitability of neuronal ensembles in the nucleus accumbens core and shell (NAc core and NAc shell ), and dorsal striatum (DS) following cocaine conditioning and EXT in Fos-GFP mice that express green fluorescent protein (GFP) in activated neurons (GFP+). During conditioning, mice received repeated cocaine injections (20 mg/kg) paired with a locomotor activity chamber (Paired) or home cage (Unpaired). Seven to 13 days later, both groups were re-exposed to the activity chamber under drug-free conditions and Paired, but not Unpaired, mice exhibited CL. In a separate group of mice, CL was extinguished by repeatedly exposing mice to the activity chamber under drug-free conditions. Following the expression and EXT of CL, GFP+ neurons in the NAc core (but not NAc shell and DS) displayed greater firing capacity compared to surrounding GFP- neurons. This difference in excitability was due to a generalized decrease in GFP- excitability following CL and a selective increase in GFP+ excitability following its EXT. These results suggest a role for both widespread and ensemble-specific changes in neuronal excitability following recall of drug-environment associations.
Sediment records of Yellow River channel migration and Holocene environmental evolution of the Hetao Plain, northern China

NASA Astrophysics Data System (ADS)

Wang, Jingzhong; Wu, Jinglu; Pan, Baotian; Jia, Hongjuan; Li, Xiao; Wei, Hao

2018-05-01

The origin and evolution of lakes in the Hetao Plain, northern China, were influenced by climate variation, channel migration, and human activity. We analyzed a suite of sediment cores from the region to investigate Yellow River channel migration and environmental change in this region over the Holocene. Short sediment cores show that environmental indicators changed markedly around CE 1850, a time that corresponds to flood events, when large amounts of river water accumulated in the western part of the Hetao Plain, giving rise to abundant small lakes. Multiple sediment variables (environmental proxies) from two long cores collected in the Tushenze Paleolake area show that sediments deposited between 12.0 and 9.0 cal ka BP were yellow clay, indicative of fluvial deposition and channel migration. From 9.0 to 7.5 cal ka BP, sand was deposited, reflecting a desert environment. From 7.5 to 2.2 cal ka BP, however, the sediments were blue-gray clay that represents lacustrine facies of Lake Tushenze, which owes its origin to an increase in strength of the East Asian monsoon. At about 2.2 cal ka BP, the north branch of the Yellow River was flooded, and the Tushenze Paleolake developed further. Around 2.0 cal ka BP, the paleolake shrank and eolian sedimentation was recorded. The analyzed sediment records are consistent with the written history from the region, which documents channel migration and environmental changes in the Hetao Plain over the Holocene.
A systems approach to hemostasis: 3. Thrombus consolidation regulates intrathrombus solute transport and local thrombin activity

PubMed Central

Welsh, John D.; Tomaiuolo, Maurizio; Wu, Jie; Colace, Thomas V.; Diamond, Scott L.

2014-01-01

Hemostatic thrombi formed after a penetrating injury have a distinctive structure in which a core of highly activated, closely packed platelets is covered by a shell of less-activated, loosely packed platelets. We have shown that differences in intrathrombus molecular transport emerge in parallel with regional differences in platelet packing density and predicted that these differences affect thrombus growth and stability. Here we test that prediction in a mouse vascular injury model. The studies use a novel method for measuring thrombus contraction in vivo and a previously characterized mouse line with a defect in integrin αIIbβ3 outside-in signaling that affects clot retraction ex vivo. The results show that the mutant mice have a defect in thrombus consolidation following vascular injury, resulting in an increase in intrathrombus transport rates and, as predicted by computational modeling, a decrease in thrombin activity and platelet activation in the thrombus core. Collectively, these data (1) demonstrate that in addition to the activation state of individual platelets, the physical properties of the accumulated mass of adherent platelets is critical in determining intrathrombus agonist distribution and platelet activation and (2) define a novel role for integrin signaling in the regulation of intrathrombus transport rates and localization of thrombin activity. PMID:24951426
A Near-Annual Record of Hurricane Activity From the Little Bahama Bank Over the Last 700 Years

NASA Astrophysics Data System (ADS)

Winkler, T. S.; van Hengstum, P. J.; Donnelly, J. P.; Sullivan, R.; Albury, N. A.

2016-12-01

Long-term and high-resolution records of hurricane activity that extend past the short observational record (<150 years) can help inform the drivers of regional hurricane activity. Blueholes in the tropical North Atlantic often provide oxygen limited environments that promote excellent sediment preservation through time, recording coarse-grained hurricane overwash deposits. Here we further develop a previous hurricane reconstruction from Thatchpoint Bluehole on Abaco Island using additional >8m vibracores collected with a Rossfelder P-3. The previous core analyzed (TPBH-C1, Continental Shelf Research, 2014) was likely obtained from the cave-area of the bluehole, and previous radiocarbon-dated bivalves deeper in the core were likely impacted by an old-carbon effect, casting doubt on the veracity of the previous age-model at this site. Recent overwash beds from Hurricane Jeanne (2004) and Hurricane Floyd (1999) are present at all coretops, and additional radiocarbon dating that includes terrestrial organic matter fragments indicates a near-annual sedimentation rate in the bluehole (>1cm yr-1), with the record spanning the last 700 years. Since 1866 CE, 12 hurricanes with wind speeds exceeding Category 2 on the Saffir-Simpson Scale (wind speeds 154-177 km hr-1) have passed within a 50 km radius of TPBH, many of which can be associated with coarse-grained overwash deposits in the top 200 cm of TPBH-C3. It appears from this high-resolution record that 1500-1650 CE and 1750-1800 CE were active intervals for hurricanes near Abaco, which were previously identified in a lower-resolution (multi-decadal) hurricane reconstruction from Abaco (Blackwood Sinkhole). Additionally, these active intervals coincide with evidence of regional storminess from multiple reconstructions based on historical archives (e.g.: Archivo General de Indias, newspapers, ships' logbooks, meteorological journals), and the 1500-1650 CE active interval falls within a previously identified 1400-1675 CE active interval of intense hurricane strikes on the Northeastern United States. Once the age-model is finalized, further comparison of this record to other regional oceanographic and high-resolution hurricane reconstructions may provide further insight into the drivers of hurricane activity during the last millennium.
Exploration of the Eltanin Impact Area (Bellingshausen Sea): Expedition ANT XVIII5a

NASA Technical Reports Server (NTRS)

Gersonde, Rainer; Kyte, Frank T.

2001-01-01

The impact of the Eltanin asteroid into the Bellingshausen Sea (2.15 Ma) is the only known impact in a deep-ocean (approx. 5 km) basin. On 26 March 2001, the FS Polarstern returned to the impact area during expedition ANT XVIII/5a. Over a period of 14 days, this region was explored by detailed bathymetric mapping, acoustic profiling of sediment deposits, and direct sampling with 18 piston cores and four gravity cores. Preliminary shipboard examination of microfossils showed that sixteen of the piston cores and three gravity cores contained sediments at least as old as the impact event and have a high probability of containing a record of the disturbances caused by the impact. During the expedition, portions of eleven piston cores were opened for preliminary examination of the impact deposits. Visual examination of cores and microscopic identification of suspect impact melt particles were were used to identify ejecta and X-ray radiographs of the opened core segments permitted analysis of sediment structures. Impact deposits were found in nine of the eleven opened cores, and a similar success rate is anticipated in the seven cores remaining to be opened. These preliminary observations indicate that the highest concentrations of meteoritic ejecta and the largest particle sizes appear to occur in the region north of the San Martin seamounts. Recovered debris includes cm-sized melt rocks and a 2.5 cm meteorite. This expedition has confirmed the presence of high concentrations of meteoritic ejecta across a region at least as large as 10(exp 5) sq km. Quantitative analyses of ejecta distribution within this region will require further study, but previous estimates of 1 km for the minimum diameter of the Eltanin asteroid, appear safe.
Multiple Core Galaxies: Implications for M31

NASA Technical Reports Server (NTRS)

Smith, B. F.; Miller, R. H.; Cuzzi, Jeffrey N. (Technical Monitor)

1994-01-01

It is generally perceived that two cores cannot survive very long within the nuclear regions of a galaxy. The recent HST discovery of a double nucleus in M31 brings this question into prominence. Physical conditions in the nuclear regions of a typical galaxy help a second core survive so it can orbit for a long time, possibly for thousands of orbits. Given the nearly uniform mass density in a core, tidal forces within a core radius are compressive in all directions and help the core survive the buffeting it takes as it orbits near the center of the galaxy. We use numerical experiments to illustrate these physical principles. Modifications to the experimental method allow the full power of the experiments to be concentrated on the nuclear regions. Spatial resolution of about 0.2 parsec comfortably resolves detail within the 1.4 parsec core radius of the second, but brighter, core (P1) in M31. The same physical principles apply in other astronomical situations, such as dumbbell galaxies, galaxies orbiting near the center of a galaxy cluster, and subclustering in galaxy clusters. The experiments also illustrate that galaxy encounters and merging are quite sensitive to external tidal forces, such as those produced by the gravitational potential in a group or cluster of galaxies.
An 80-year summer temperature history from the Xiao Dongkemadi ice core in the central Tibetan Plateau and its association with atmospheric circulation

NASA Astrophysics Data System (ADS)

Li, Xiangying; Ding, Yongjian; Yu, Zhongbo; Mika, Sillanpää; Liu, Shiyin; Shangguan, Donghui; Lu, Chengyang

2015-02-01

The climate significance of oxygen isotopes from the central Tibetan Plateau (cTP) ice cores is a debated issue because of large scale atmospheric circulation. A high-resolution δ18O record was recovered from the Xiao Dongkemadi (XD) ice core, which expanded the spatial coverage of δ18O data in this region. Annual average δ18O correlated significantly with nearby MJJAS air temperatures, suggesting the δ18O can be used as a proxy to reconstruct regional climate change. The reconstructed temperature anomaly is related to the regional and global warming trends, and the greater warming amplitude since 1970s is related to the elevation dependency of the warming signal. The close relationship of the warming to variations in glacier mass balances and discharge reveal that recent warming has led to obvious glacier shrinkage and runoff increase. Correlation analysis suggests that monsoon and westerly moisture substantially influence the cTP ice core records, along with an increase in their level of contribution to the XD core accumulation in recent decades, and confirms a teleconnection of regional climate of the cTP ice cores with climate parameters in the Indian and North Atlantic Oceans.
Personality Is Reflected in the Brain's Intrinsic Functional Architecture

PubMed Central

Adelstein, Jonathan S.; Shehzad, Zarrar; Mennes, Maarten; DeYoung, Colin G.; Zuo, Xi-Nian; Kelly, Clare; Margulies, Daniel S.; Bloomfield, Aaron; Gray, Jeremy R.; Castellanos, F. Xavier; Milham, Michael P.

2011-01-01

Personality describes persistent human behavioral responses to broad classes of environmental stimuli. Investigating how personality traits are reflected in the brain's functional architecture is challenging, in part due to the difficulty of designing appropriate task probes. Resting-state functional connectivity (RSFC) can detect intrinsic activation patterns without relying on any specific task. Here we use RSFC to investigate the neural correlates of the five-factor personality domains. Based on seed regions placed within two cognitive and affective ‘hubs’ in the brain—the anterior cingulate and precuneus—each domain of personality predicted RSFC with a unique pattern of brain regions. These patterns corresponded with functional subdivisions responsible for cognitive and affective processing such as motivation, empathy and future-oriented thinking. Neuroticism and Extraversion, the two most widely studied of the five constructs, predicted connectivity between seed regions and the dorsomedial prefrontal cortex and lateral paralimbic regions, respectively. These areas are associated with emotional regulation, self-evaluation and reward, consistent with the trait qualities. Personality traits were mostly associated with functional connections that were inconsistently present across participants. This suggests that although a fundamental, core functional architecture is preserved across individuals, variable connections outside of that core encompass the inter-individual differences in personality that motivate diverse responses. PMID:22140453
Structure of an anti-HIV-1 hammerhead ribozyme complex with a 17-mer DNA substrate analog of HIV-1 gag RNA and a mechanism for the cleavage reaction: 750 MHz NMR and computer experiments

NASA Technical Reports Server (NTRS)

Ojha, R. P.; Dhingra, M. M.; Sarma, M. H.; Myer, Y. P.; Setlik, R. F.; Shibata, M.; Kazim, A. L.; Ornstein, R. L.; Rein, R.; Turner, C. J.;

1997-01-01

The structure of an anti-HIV-1 ribozyme-DNA abortive substrate complex was investigated by 750 MHz NMR and computer modeling experiments. The ribozyme was a chimeric molecule with 30 residues-18 DNA nucleotides, and 12 RNA residues in the conserved core. The DNA substrate analog had 17 residues. The chimeric ribozyme and the DNA substrate formed a shortened ribozyme-abortive substrate complex of 47 nucleotides with two DNA stems (stems I and III) and a loop consisting of the conserved core residues. Circular dichroism spectra showed that the DNA stems assume A-family conformation at the NMR concentration and a temperature of 15 degrees C, contrary to the conventional wisdom that DNA duplexes in aqueous solution populate entirely in the B-form. It is proposed that the A-family RNA residues at the core expand the A-family initiated at the core into the DNA stems because of the large free energy requirement for the formation of A/B junctions. Assignments of the base H8/H6 protons and H1' of the 47 residues were made by a NOESY walk. In addition to the methyl groups of all T's, the imino resonances of stems I and III and AH2's were assigned from appropriate NOESY walks. The extracted NMR data along with available crystallographic data, were used to derive a structural model of the complex. Stems I and III of the final model displayed a remarkable similarity to the A form of DNA; in stem III, a GC base pair was found to be moving into the floor of the minor groove defined by flanking AT pairs; data suggest the formation of a buckled rhombic structure with the adjacent pair; in addition, the base pair at the interface of stem III and the loop region displayed deformed geometry. The loop with the catalytic core, and the immediate region of the stems displayed conformational multiplicity within the NMR time scale. A catalytic mechanism for ribozyme action based on the derived structure, and consistent with biochemical data in the literature, is proposed. The complex between the anti HIV-1 gag ribozyme and its abortive DNA substrate manifests in the detection of a continuous track of A.T base pairs; this suggests that the interaction between the ribozyme and its DNA substrate is stronger than the one observed in the case of the free ribozyme where the bases in stem I and stem III regions interact strongly with the ribozyme core region (Sarma, R. H., et al. FEBS Letters 375, 317-23, 1995). The complex formation provides certain guidelines in the design of suitable therapeutic ribozymes. If the residues in the ribozyme stem regions interact with the conserved core, it may either prevent or interfere with the formation of a catalytically active tertiary structure.

Brain activation during dual-task processing is associated with cardiorespiratory fitness and performance in older adults

PubMed Central

Wong, Chelsea N.; Chaddock-Heyman, Laura; Voss, Michelle W.; Burzynska, Agnieszka Z.; Basak, Chandramallika; Erickson, Kirk I.; Prakash, Ruchika S.; Szabo-Reed, Amanda N.; Phillips, Siobhan M.; Wojcicki, Thomas; Mailey, Emily L.; McAuley, Edward; Kramer, Arthur F.

2015-01-01

Higher cardiorespiratory fitness is associated with better cognitive performance and enhanced brain activation. Yet, the extent to which cardiorespiratory fitness-related brain activation is associated with better cognitive performance is not well understood. In this cross-sectional study, we examined whether the association between cardiorespiratory fitness and executive function was mediated by greater prefrontal cortex activation in healthy older adults. Brain activation was measured during dual-task performance with functional magnetic resonance imaging in a sample of 128 healthy older adults (59–80 years). Higher cardiorespiratory fitness was associated with greater activation during dual-task processing in several brain areas including the anterior cingulate and supplementary motor cortex (ACC/SMA), thalamus and basal ganglia, right motor/somatosensory cortex and middle frontal gyrus, and left somatosensory cortex, controlling for age, sex, education, and gray matter volume. Of these regions, greater ACC/SMA activation mediated the association between cardiorespiratory fitness and dual-task performance. We provide novel evidence that cardiorespiratory fitness may support cognitive performance by facilitating brain activation in a core region critical for executive function. PMID:26321949

Accounting for magnetic diffusion in core flow inversions from geomagnetic secular variation

NASA Astrophysics Data System (ADS)

Amit, Hagay; Christensen, Ulrich R.

2008-12-01

We use numerical dynamos to investigate the possible role of magnetic diffusion at the top of the core. We find that the contribution of radial magnetic diffusion to the secular variation is correlated with that of tangential magnetic diffusion for a wide range of control parameters. The correlation between the two diffusive terms is interpreted in terms of the variation in the strength of poloidal flow along a columnar flow tube. The amplitude ratio of the two diffusive terms is used to estimate the probable contribution of radial magnetic diffusion to the secular variation at Earth-like conditions. We then apply a model where radial magnetic diffusion is proportional to tangential diffusion to core flow inversions of geomagnetic secular variation data. We find that including magnetic diffusion does not change dramatically the global flow but some significant local variations appear. In the non frozen-flux core flow models (termed `diffusive'), the hemispherical dichotomy between the active Atlantic and quiet Pacific is weaker, a cyclonic vortex below North America emerges and the vortex below Asia is stronger. Our results have several important geophysical implications. First, our diffusive flow models contain some flow activity at low latitudes in the Pacific, suggesting a local balance between magnetic field advection and diffusion in that region. Second, the cyclone below North America in our diffusive flows reconciles the difference between mantle-driven thermal wind predictions and frozen-flux core flow models, and is consistent with the prominent intense magnetic flux patch below North America in geomagnetic field models. Finally, we hypothesize that magnetic diffusion near the core surface plays a larger role in the geomagnetic secular variation than usually assumed.
Evolution of oceanic core complex domes and corrugations

NASA Astrophysics Data System (ADS)

Cann, J.; Escartin, J.; Smith, D.; Schouten, H.

2007-12-01

In regions of the oceans where detachment faulting is developed widely, individual core complex domes (elevated massifs capped by corrugated detachment surfaces) show a consistent morphology. At their outward sides, most core complex domes are attached to a planar slope, interpreted (Smith et al., 2006) as an originally steep inward-facing normal fault that has been rotated to shallower angles. We suggest that the break in slope where the originally steep normal fault meets the domal corrugated surface marks the trace of the brittle-ductile transition at the base of the original normal fault. The steep faults originate within a short distance of the spreading axis. This means that the arcuate shape of the intersection of the steep fault with the dome must indicate the shape of the brittle-ductile transition very close to the spreading axis. The transition must be very shallow close to the summit of the dome and deeper on each flank. Evidence from drilling of some core complexes (McCaig et al, 2007) shows that while the domal detachment faults are active they may channel hydrothermal flow at black smoker temperatures and may be simultaneously injected by magma from below. This indicates a close link between igneous activity, hydrothermal flow and deformation while a core complex is forming. Once the shape of the core complex dome is established, it persists as the ductile footwall mantle rising from below is shaped by the overlying brittle hanging wall that has been cooled by the hydrothermal circulation. The corrugations in the footwall must be moulded into it by irregularities in the brittle hanging wall, as suggested by Spencer (1999). The along-axis arched shape of the hanging wall helps to stabilise the domal shape of the footwall as it rises and cools.
Design and structure of an equilibrium protein folding intermediate: a hint into dynamical regions of proteins.

PubMed

Ayuso-Tejedor, Sara; Angarica, Vladimir Espinosa; Bueno, Marta; Campos, Luis A; Abián, Olga; Bernadó, Pau; Sancho, Javier; Jiménez, M Angeles

2010-07-23

Partly unfolded protein conformations close to the native state may play important roles in protein function and in protein misfolding. Structural analyses of such conformations which are essential for their fully physicochemical understanding are complicated by their characteristic low populations at equilibrium. We stabilize here with a single mutation the equilibrium intermediate of apoflavodoxin thermal unfolding and determine its solution structure by NMR. It consists of a large native region identical with that observed in the X-ray structure of the wild-type protein plus an unfolded region. Small-angle X-ray scattering analysis indicates that the calculated ensemble of structures is consistent with the actual degree of expansion of the intermediate. The unfolded region encompasses discontinuous sequence segments that cluster in the 3D structure of the native protein forming the FMN cofactor binding loops and the binding site of a variety of partner proteins. Analysis of the apoflavodoxin inner interfaces reveals that those becoming destabilized in the intermediate are more polar than other inner interfaces of the protein. Natively folded proteins contain hydrophobic cores formed by the packing of hydrophobic surfaces, while natively unfolded proteins are rich in polar residues. The structure of the apoflavodoxin thermal intermediate suggests that the regions of natively folded proteins that are easily responsive to thermal activation may contain cores of intermediate hydrophobicity. Copyright (c) 2010 Elsevier Ltd. All rights reserved.
Neurons of human nucleus accumbens.

PubMed

Sazdanović, Maja; Sazdanović, Predrag; Zivanović-Macuzić, Ivana; Jakovljević, Vladimir; Jeremić, Dejan; Peljto, Amir; Tosevski, Jovo

2011-08-01

Nucleus accumbens is a part of the ventral striatum also known as a drug active brain region, especially related with drug addiction. The aim of the study was to investigate the Golgi morphology of the nucleus accumbens neurons. The study was performed on the frontal and sagittal sections of 15 human brains by the Golgi Kopsch method. We classified neurons in the human nucleus accumbens according to their morphology and size into four types: type I--fusiform neurons; type II--fusiform neurons with lateral dendrite, arising from a part of the cell body; type III--pyramidal-like neuron; type IV--multipolar neuron. The medium spiny neurons, which are mostly noted regarding to the drug addictive conditions of the brain, correspond to the type IV--multipolar neurons. Two regions of human nucleus accumbens could be clearly recognized on Nissl and Golgi preparations each containing different predominant neuronal types. Central part of nucleus accumbens, core region, has a low density of impregnated neurons with predominant type III, pyramidal-like neurons, with spines on secondary branches and rare type IV, multipolar neurons. Contrary to the core, peripheral region, shell of nucleus, has a high density of impregnated neurons predominantly contained of type I and type IV--multipolar neurons, which all are rich in spines on secondary and tertiary dendritic branches. Our results indicate great morphological variability of human nucleus accumbens neurons. This requires further investigations and clarifying clinical significance of this important brain region.
Historical anthropogenic contributions to mercury accumulation recorded by a peat core from Dajiuhu montane mire, central China.

PubMed

Li, Yuanping; Ma, Chunmei; Zhu, Cheng; Huang, Run; Zheng, Chaogui

2016-09-01

Mercury (Hg) accumulation records spanning the last 16,000 years before present (yr BP, relative to AD 1950) were derived from a peat core collected from Dajiuhu mire, central China. The natural Hg concentration and accumulation rate (free from anthropogenic influence) were 135.5 ± 53.9 ng g(-1) and 6.5 ± 4.5 μg m(-2) yr(-1), respectively. The increase in Hg flux that started from a core depth of 96.5 cm (3358 cal yr BP) is independent of soil erosion and organic matter content. We attribute this to an increase in atmospheric Hg deposition derived from regional anthropogenic activities. Anthropogenic Hg accumulation rates (Hg-ARA) in the pre-industrial period peaked during the Ming and the early Qing dynasties (582-100 cal yr BP), with Hg-ARA of 9.9-24.6 and 10.7-24.4 μg m(-2) yr(-1), respectively. In the industrial interval (post∼1850 AD), Hg-ARA increased progressively and reached 32.7 μg m(-2) yr(-1) at the top of the core. Our results indicate the existence of regional atmospheric Hg pollution spanning the past ∼3400 years, and place recent Hg enrichment in central China in a broader historical context. Copyright © 2016 Elsevier Ltd. All rights reserved.
[Core muscle chains activation during core exercises determined by EMG-a systematic review].

PubMed

Rogan, Slavko; Riesen, Jan; Taeymans, Jan

2014-10-15

Good core muscles strength is essential for daily life and sports activities. However, the mechanism how core muscles may be effectively triggered by exercises is not yet precisely described in the literature. The aim of this systematic review was to evaluate the rate of activation as measured by electromyography of the ventral, lateral and dorsal core muscle chains during core (trunk) muscle exercises. A total of 16 studies were included. Exercises with a vertical starting position, such as the deadlift or squat activated significantly more core muscles than exercises in the horizontal initial position.
Steamworlds: Atmospheric Structure and Critical Mass of Planets Accreting Icy Pebbles

NASA Astrophysics Data System (ADS)

Chambers, John

2017-11-01

In the core accretion model, gas-giant planets first form a solid core, which then accretes gas from a protoplanetary disk when the core exceeds a critical mass. Here, we model the atmosphere of a core that grows by accreting ice-rich pebbles. The ice fraction of pebbles evaporates in warm regions of the atmosphere, saturating it with water vapor. Excess water precipitates to lower altitudes. Beneath an outer radiative region, the atmosphere is convective, following a moist adiabat in saturated regions due to water condensation and precipitation. Atmospheric mass, density, and temperature increase with core mass. For nominal model parameters, planets with core masses (ice + rock) between 0.08 and 0.16 Earth masses have surface temperatures between 273 and 647 K and form an ocean. In more massive planets, water exists as a supercritical convecting fluid mixed with gas from the disk. Typically, the core mass reaches a maximum (the critical mass) as a function of the total mass when the core is 2-5 Earth masses. The critical mass depends in a complicated way on pebble size, mass flux, and dust opacity due to the occasional appearance of multiple core-mass maxima. The core mass for an atmosphere of 50% hydrogen and helium may be a more robust indicator of the onset of gas accretion. This mass is typically 1-3 Earth masses for pebbles that are 50% ice by mass, increasing with opacity and pebble flux and decreasing with pebble ice/rock ratio.
A full virial analysis of the prestellar cores in the Ophiuchus molecular cloud

NASA Astrophysics Data System (ADS)

Pattle, Kate; Ward-Thompson, Derek

2015-08-01

We present the first observations of the Ophiuchus molecular cloud performed as part of the James Clerk Maxwell (JCMT) Gould Belt Survey with the SCUBA-2 instrument. We demonstrate methods for combining these data with HARP CO, Herschel and IRAM N2H+ observations in order to accurately quantify the properties of the SCUBA-2 sources in Ophiuchus.We perform a full virial analysis on the starless cores in Ophiuchus, including external pressure. We find that the majority of our cores are either bound or virialised, and that gravity and external pressure are typically of similar importance in confining cores. We find that the critical Bonnor-Ebert stability criterion is not a good indicator of the boundedness of our cores. We determine that N2H+ is a good tracer of the bound material of prestellar cores, and find that non-thermal linewidths decrease substantially between the intermediate-density gas traced by C18O and the high-density gas traced by N2H+, indicating the dissipation of turbulence within cores.We find variation from region to region in the virial balance of cores and the relative contributions of pressure and gravity to core support, as well as variation in the degree to which turbulence is dissipated within cores and in the relative numbers of protostellar and starless sources. We find further support for our previous hypothesis of a global evolutionary gradient from southwest to northeast across Ophiuchus, indicating sequential star formation across the region.
A Submillimetre Study of Massive Star Formation Within the W51 Complex and Infrared Dark Clouds

NASA Astrophysics Data System (ADS)

Parsons, Harriet Alice Louise

Despite its importance the fundamental question of how massive stars form remains unanswered, with improvements to both models and observations having crucial roles to play. To quote Bate et al. (2003) computational models of star formation are limited because "conditions in molecular clouds are not sufficiently well understood to be able to select a representative sample of cloud cores for the initial conditions". It is this notion that motivates the study of the environments within Giant Molecular Clouds (GMCs) and Infrared Dark Clouds (IRDCs), known sites of massive star formation, at the clump and core level. By studying large populations of these objects, it is possible to make conclusions based on global properties. With this in mind I study the dense molecular clumps within one of the most massive GMCs in the Galaxy: the W51 GMC. New observations of the W51 GMC in the 12CO, 13CO and C18O (3-2) transitions using the HARP instrument on the JCMT are presented. With the help of the clump finding algorithm CLUMPFIND a total of 1575 dense clumps are identified of which 1130 are associated with the W51 GMC, yielding a dense mass reservoir of 1.5 × 10^5 M contained within these clumps. Of these clumps only 1% by number are found to be super-critical, yielding a super-critical clump formation efficiency of 0.5%, below current SFE estimates of the region. This indicates star formation within the W51 GMC will diminish over time although evidence from the first search for molecular outflows presents the W51 GMC in an active light with a lower limit of 14 outflows. The distribution of the outflows within the region searched found them concentrated towards the W51A region. Having much smaller sizes and masses, obtaining global properties of clumps and cores within IRDCs required studying a large sample of these objects. To do this pre-existing data from the SCUBA Legacy Catalogue was utilised to study IRDCs within a catalogues based on 8 μm data. This data identified 154 IRDC cores that are detected at 850 μm and 51 cores that were not. This work suggests that cores not detected at 850 μm are low mass, low column density and low temperature cores that are below the sensitivity limit of SCUBA at 850 μm Utilising observations at 24 μm from the Spitzer space telescope, allows for an investigation of current star formation by looking for warm embedded objects within the cores. This work reveals 69% of the IRDC cores have 24 μm embedded objects. IRDC cores without associated 24 μm emission ("starless" IRDC cores) may have yet to form stars, or may contain low mass YSOs below the detection limit. If it is assumed that cores without 24 μm embedded sources are at an earlier evolutionary stage to cores with embedded objects a statistical lifetime for the quiescent phase of a few 10^3 - 10^4 years is derived.
A 270-year Ice Core Record of Atmospheric Mercury Deposition to Western North America

NASA Astrophysics Data System (ADS)

Schuster, P. F.; Krabbenhoft, D. P.; Naftz, D. L.; Cecil, L. D.; Olson, M. L.; DeWild, J. F.; Susong, D. D.; Green, J. R.

2001-05-01

The Upper Fremont Glacier (UFG), a mid-latitude glacier in the Wind River Range, Wyoming, U.S.A., contains a record of atmospheric mercury deposition. Although some polar ice-core studies have provided a limited record of past mercury deposition, polar cores are, at best, proxy indicators of historic mercury deposition in the mid-latitudes. Two ice cores removed from the UFG in 1991 and 1998 (totaling 160 meters in length) provided a chronology and paleoenvironmental framework. This aids in the interpretation of the mercury deposition record. For the first time reported from a mid-latitude ice core, using low-level procedures, 97 ice core samples were analyzed to reconstruct a 270-year atmospheric mercury deposition record based in the western United States. Trends in mercury concentration from the UFG record major releases to the atmosphere of both natural and anthropogenic mercury from regional and global sources. We find that mercury concentrations are significantly, but for relatively short time intervals, elevated during periods corresponding to volcanic eruptions with global impact. This indicates that these natural events "punctuate" the record. Anthropogenic activities such as industrialization (global scale), gold mining and war-time manufacturing (regional scale), indicate that chronic levels of elevated mercury emissions have a greater influence on the historical atmospheric deposition record from the UFG. In terms of total mercury deposition recorded by the UFG during approximately the past 270 years: anthropogenic inputs contributed 52 percent; volcanic events contributed 6 percent; and pre-industrialization or background accounted for 42 percent of the total input. More significantly, during the last 100 years, anthropogenic sources contributed 70 percent of the total mercury input. A declining trend in mercury concentrations is obvious during the past 20 years. Declining mercury concentrations in the upper section of the ice core are corroborated by recent declining trends observed in sediment cores. This is also verified by similar concentrations in UFG snow samples collected in 1999. This decline may be in response to the United States Clean Air Act of 1970.
COUPLED FAST-THERMAL POWER BREEDER REACTOR

DOEpatents

Avery, R.

1961-07-18

A nuclear reactor having a region operating predominantly on fast neutrons and another region operating predominantly on slow neutrons is described. The fast region is a plutonium core and the slow region is a natural uranium blanket around the core. Both of these regions are free of moderator. A moderating reflector surrounds the uranium blanket. The moderating material and thickness of the reflector are selected so that fissions in the uranium blanket make a substantial contribution to the reactivity of the reactor.
Mechanical design of a light water breeder reactor

DOEpatents

Fauth, Jr., William L.; Jones, Daniel S.; Kolsun, George J.; Erbes, John G.; Brennan, John J.; Weissburg, James A.; Sharbaugh, John E.

1976-01-01

In a light water reactor system using the thorium-232 -- uranium-233 fuel system in a seed-blanket modular core configuration having the modules arranged in a symmetrical array surrounded by a reflector blanket region, the seed regions are disposed for a longitudinal movement between the fixed or stationary blanket region which surrounds each seed region. Control of the reactor is obtained by moving the inner seed region thus changing the geometry of the reactor, and thereby changing the leakage of neutrons from the relatively small seed region into the blanket region. The mechanical design of the Light Water Breeder Reactor (LWBR) core includes means for axially positioning of movable fuel assemblies to achieve the neutron economy required of a breeder reactor, a structure necessary to adequately support the fuel modules without imposing penalties on the breeding capability, a structure necessary to support fuel rods in a closely packed array and a structure necessary to direct and control the flow of coolant to regions in the core in accordance with the heat transfer requirements.
Reconciling Models of Luminous Blazars with Magnetic Fluxes Determined by Radio Core-shift Measurements

NASA Astrophysics Data System (ADS)

Nalewajko, Krzysztof; Sikora, Marek; Begelman, Mitchell C.

2014-11-01

Estimates of magnetic field strength in relativistic jets of active galactic nuclei, obtained by measuring the frequency-dependent radio core location, imply that the total magnetic fluxes in those jets are consistent with the predictions of the magnetically arrested disk (MAD) scenario of jet formation. On the other hand, the magnetic field strength determines the luminosity of the synchrotron radiation, which forms the low-energy bump of the observed blazar spectral energy distribution (SED). The SEDs of the most powerful blazars are strongly dominated by the high-energy bump, which is most likely due to the external radiation Compton mechanism. This high Compton dominance may be difficult to reconcile with the MAD scenario, unless (1) the geometry of external radiation sources (broad-line region, hot-dust torus) is quasi-spherical rather than flat, or (2) most gamma-ray radiation is produced in jet regions of low magnetization, e.g., in magnetic reconnection layers or in fast jet spines.
RECONCILING MODELS OF LUMINOUS BLAZARS WITH MAGNETIC FLUXES DETERMINED BY RADIO CORE-SHIFT MEASUREMENTS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nalewajko, Krzysztof; Begelman, Mitchell C.; Sikora, Marek, E-mail: knalew@stanford.edu

2014-11-20

Estimates of magnetic field strength in relativistic jets of active galactic nuclei, obtained by measuring the frequency-dependent radio core location, imply that the total magnetic fluxes in those jets are consistent with the predictions of the magnetically arrested disk (MAD) scenario of jet formation. On the other hand, the magnetic field strength determines the luminosity of the synchrotron radiation, which forms the low-energy bump of the observed blazar spectral energy distribution (SED). The SEDs of the most powerful blazars are strongly dominated by the high-energy bump, which is most likely due to the external radiation Compton mechanism. This high Comptonmore » dominance may be difficult to reconcile with the MAD scenario, unless (1) the geometry of external radiation sources (broad-line region, hot-dust torus) is quasi-spherical rather than flat, or (2) most gamma-ray radiation is produced in jet regions of low magnetization, e.g., in magnetic reconnection layers or in fast jet spines.« less
Cytoplasmic Domains and Voltage-Dependent Potassium Channel Gating

PubMed Central

Barros, Francisco; Domínguez, Pedro; de la Peña, Pilar

2012-01-01

The basic architecture of the voltage-dependent K+ channels (Kv channels) corresponds to a transmembrane protein core in which the permeation pore, the voltage-sensing components and the gating machinery (cytoplasmic facing gate and sensor–gate coupler) reside. Usually, large protein tails are attached to this core, hanging toward the inside of the cell. These cytoplasmic regions are essential for normal channel function and, due to their accessibility to the cytoplasmic environment, constitute obvious targets for cell-physiological control of channel behavior. Here we review the present knowledge about the molecular organization of these intracellular channel regions and their role in both setting and controlling Kv voltage-dependent gating properties. This includes the influence that they exert on Kv rapid/N-type inactivation and on activation/deactivation gating of Shaker-like and eag-type Kv channels. Some illustrative examples about the relevance of these cytoplasmic domains determining the possibilities for modulation of Kv channel gating by cellular components are also considered. PMID:22470342
Global ice-core research: Understanding and applying environmental records of the past

USGS Publications Warehouse

Cecil, L. DeWayne; Green, Jaromy R.; Naftz, David L.

2000-01-01

Environmental changes are of major concern at low- or mid-latitude regions of our Earth simply because this is where 80 to 90 percent of the world’s human population live. Ice cores collected from isolated polar regions are, at best, proxy indicators of low- and mid-latitude environmental changes. Because polar icecore research is limiting in this sense, ice cores from low- and mid-latitude glaciers are being used to study past environmental changes in order to better understand and predict future environmental changes that may affect the populated regions of the world.
Aerodynamics inside a rapid compression machine

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mittal, Gaurav; Sung, Chih-Jen

2006-04-15

The aerodynamics inside a rapid compression machine after the end of compression is investigated using planar laser-induced fluorescence (PLIF) of acetone. To study the effect of reaction chamber configuration on the resulting aerodynamics and temperature field, experiments are conducted and compared using a creviced piston and a flat piston under varying conditions. Results show that the flat piston design leads to significant mixing of the cold vortex with the hot core region, which causes alternate hot and cold regions inside the combustion chamber. At higher pressures, the effect of the vortex is reduced. The creviced piston head configuration is demonstratedmore » to result in drastic reduction of the effect of the vortex. Experimental conditions are also simulated using the Star-CD computational fluid dynamics package. Computed results closely match with experimental observation. Numerical results indicate that with a flat piston design, gas velocity after compression is very high and the core region shrinks quickly due to rapid entrainment of cold gases. Whereas, for a creviced piston head design, gas velocity after compression is significantly lower and the core region remains unaffected for a long duration. As a consequence, for the flat piston, adiabatic core assumption can significantly overpredict the maximum temperature after the end of compression. For the creviced piston, the adiabatic core assumption is found to be valid even up to 100 ms after compression. This work therefore experimentally and numerically substantiates the importance of piston head design for achieving a homogeneous core region inside a rapid compression machine. (author)« less
Autism and psychosis expressions diametrically modulate the right temporoparietal junction.

PubMed

Abu-Akel, Ahmad M; Apperly, Ian A; Wood, Stephen J; Hansen, Peter C

2017-10-01

The mentalizing network is atypically activated in autism and schizophrenia spectrum disorders. While these disorders are considered diagnostically independent, expressions of both can co-occur in the same individual. We examined the concurrent effect of autism traits and psychosis proneness on the activity of the mentalizing network in 24 neurotypical adults while performing a social competitive game. Activations were observed in the paracingulate cortex and the right temporoparietal junction (rTPJ). Autism traits and psychosis proneness did not modulate activity within the paracingulate or the dorsal component of the rTPJ. However, diametric modulations of autism traits and psychosis proneness were observed in the posterior (rvpTPJ) and anterior (rvaTPJ) subdivisions of the ventral rTPJ, which respectively constitute core regions within the mentalizing and attention-reorienting networks. Within the rvpTPJ, increasing autism tendencies decreased activity, and increasing psychosis proneness increased activity. This effect was reversed within the rvaTPJ. We suggest that this results from an interaction between regions responsible for higher level social cognitive processing (rvpTPJ) and regions responsible for domain-general attentional processes (rvaTPJ). The observed diametric modulation of autism tendencies and psychosis proneness of neuronal activity within the mentalizing network highlights the importance of assessing both autism and psychosis expressions within the individual.
A Decade of H α Transits for HD 189733 b: Stellar Activity versus Absorption in the Extended Atmosphere

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cauley, P. Wilson; Redfield, Seth; Jensen, Adam G., E-mail: pcauley@wesleyan.edu

HD 189733 b is one of the most well studied exoplanets due to its large transit depth and host star brightness. The focus on this object has produced a number of high-cadence transit observations using high-resolution optical spectrographs. Here we present an analysis of seven full H α transits of HD 189733 b using HARPS on the 3.6 meter La Silla telescope and HIRES on Keck I, taken over the course of nine years from 2006 to 2015. H α transmission signals are analyzed as a function of the stellar activity level, as measured using the normalized core flux ofmore » the Ca ii H and K lines. We find strong variations in the strength of the H α transmission spectrum from epoch to epoch. However, there is no clear trend between the Ca ii core emission and the strength of the in-transit H α signal, although the transit showing the largest absorption value also occurs when the star is the most active. We present simulations of the in-transit contrast effect and find that the planet must consistently transit active latitudes with very strong facular and plage emission regions in order to reproduce the observed line strengths. We also investigate the measured velocity centroids with models of planetary rotation and show that the small line profile velocities could be due to large velocities in the upper atmosphere of the planet. Overall, we find it more likely that the measured H α signals arise in the extended planetary atmosphere, although a better understanding of active region emission for active stars such as HD 189733 is needed.« less
A Study of THT Cold Cores Population in the Star-Forming Region in Serpens

NASA Astrophysics Data System (ADS)

Fiorellino, Eleonora

2017-11-01

The purpose of this work is to produce the Core Mass Function (CMF) of the Serpens star-forming region and confront it with the Initial Mass Function (IMF), the statistical distribution of initial star mass. As Testi & Sergent (1998) discovered, the power-law index of the slope of the CMF is very close to the one of the Salpeter's IMF (Salpeter, 1955): dN/dM / M2.35. This strongly suggests that the stellar IMF results from the fragmentation process in turbulent cloud cores rather than from stellar accretion mechanisms and gives a huge contribute to undestanding the star formation. For this work, we started from the data delivered by the European satellite Herschel and produced the maps of the Serpens with Unimap code (Piazzo et al, 2015). Hence we obtained a core catalogue with two different softwares getsources (Men'shchikov et al, 2012) and CuTEx (Molinari et al, 2011) and we eliminated from it any source that is not a core. A full discussion of the cores physical propreties as well as the whole region is under preparation.

Mediterranean fire histories since the Last Glacial Maximum from lake sedimentary micro- charcoals

NASA Astrophysics Data System (ADS)

Roberts, C.; Turner, R.

2006-12-01

Microscopic charcoal analysis has been used to reconstruct past fire activity over a range of spatial and temporal scales in Europe, the Americas and Australasia. By contrast, and despite the importance of fire in its modern landscape ecology, few systematic attempts have been made in the circum-Mediterranean region to reconstruct long-term fire histories using micro-charcoals or other methods of analysis. This study has used non-destructive methods of charcoal extraction based on sieving plus heavy-liquid separation (Turner et al in press In: Charcoal from the past: cultural and palaeoenvironmental implications. BAR International Series, Archaeopress, Oxford) along with contiguous core sampling of sedimentary core sequences from a number of East Mediterranean lakes that span the last glacial-interglacial climatic transition. At Eski Acýgöl, central Turkey (Roberts et al. Holocene, 2001, 11, 719-734), then a deepwater crater lake, overall micro-charcoal concentrations in sediments are low and were dominated by influx from regional-landscape rather than local- scale fire events. This record therefore provides a good proxy for overall fire frequency/intensity across the central Anatolia plateau, whose (hypothetical) modern "natural" vegetation is predominantly open oak-grass- Artemisia parkland. Shallow water sites such as Akgöl typically record much higher overall micro-charcoal abundance as a result of local-scale burning of the marsh surface at times of lowered water table, and thus received episodic local charcoal influx superimposed on background regional airborne sources. These results indicate that site type / catchment area and sampling / analytic methodology can critically influence reconstructed fire histories. We have correlated our charcoal records with existing multi-proxy data from the same cores (stable isotopes and pollen). This shows that climatic variations and biomass availability were the main factors controlling the timing of regional fire activity from the Last Glacial Maximum through to the Early Holocene. The Holocene portion of the Eski Acýgöl record contains a significant cyclicity with a periodicity of 1400 to 1500 years which may be linked with external (e.g. solar) forcing.
Fabrication of core-shell micro/nanoparticles for programmable dual drug release by emulsion electrospraying

NASA Astrophysics Data System (ADS)

Wang, Yazhou; Zhang, Yiqiong; Wang, Bochu; Cao, Yang; Yu, Qingsong; Yin, Tieying

2013-06-01

The study aimed at constructing a novel drug delivery system for programmable multiple drug release controlled with core-shell structure. The core-shell structure consisted of chitosan nanoparticles as core and polyvinylpyrrolidone micro/nanocoating as shell to form core-shell micro/nanoparticles, which was fabricated by ionic gelation and emulsion electrospray methods. As model drug agents, Naproxen and rhodamine B were encapsulated in the core and shell regions, respectively. The core-shell micro/nanoparticles thus fabricated were characterized and confirmed by scanning electron microscope, transmission electron microscope, and fluorescence optical microscope. The core-shell micro/nanoparticles showed good release controllability through drug release experiment in vitro. It was noted that a programmable release pattern for dual drug agents was also achieved by adjusting their loading regions in the core-shell structures. The results indicate that emulsion electrospraying technology is a promising approach in fabrication of core-shell micro/nanoparticles for programmable dual drug release. Such a novel multi-drug delivery system has a potential application for the clinical treatment of cancer, tuberculosis, and tissue engineering.
INEFFICIENT DRIVING OF BULK TURBULENCE BY ACTIVE GALACTIC NUCLEI IN A HYDRODYNAMIC MODEL OF THE INTRACLUSTER MEDIUM

DOE Office of Scientific and Technical Information (OSTI.GOV)

Reynolds, Christopher S.; Balbus, Steven A.; Schekochihin, Alexander A., E-mail: chris@astro.umd.edu

2015-12-10

Central jetted active galactic nuclei (AGNs) appear to heat the core regions of the intracluster medium (ICM) in cooling-core galaxy clusters and groups, thereby preventing a cooling catastrophe. However, the physical mechanism(s) by which the directed flow of kinetic energy is thermalized throughout the ICM core remains unclear. We examine one widely discussed mechanism whereby the AGN induces subsonic turbulence in the ambient medium, the dissipation of which provides the ICM heat source. Through controlled inviscid three-dimensional hydrodynamic simulations, we verify that explosive AGN-like events can launch gravity waves (g-modes) into the ambient ICM, which in turn decays to volume-fillingmore » turbulence. In our model, however, this process is found to be inefficient, with less than 1% of the energy injected by the AGN activity actually ending up in the turbulence of the ambient ICM. This efficiency is an order of magnitude or more too small to explain the observations of AGN-feedback in galaxy clusters and groups with short central cooling times. Atmospheres in which the g-modes are strongly trapped/confined have an even lower efficiency since, in these models, the excitation of turbulence relies on the g-modes’ ability to escape from the center of the cluster into the bulk ICM. Our results suggest that, if AGN-induced turbulence is indeed the mechanism by which the AGN heats the ICM core, its driving may rely on physics beyond that captured in our ideal hydrodynamic model.« less
Intra-annual variations in atmospheric dust and tritium in the North Pacific region detected from an ice core from Mount Wrangell, Alaska

NASA Astrophysics Data System (ADS)

Yasunari, Teppei J.; Shiraiwa, Takayuki; Kanamori, Syosaku; Fujii, Yoshiyuki; Igarashi, Makoto; Yamazaki, Koji; Benson, Carl S.; Hondoh, Takeo

2007-05-01

The North Pacific is subject to various seasonal climate phenomena and material circulations. Therefore intra-annual ice core data are necessary for an assessment of the climate variations. To assess past variations, a 50-m ice core was drilled at the summit of Mount Wrangell Volcano, Alaska. The dust number, tritium concentrations, and stable hydrogen isotope were analyzed. The period covered was from 1992 to 2002. We found that the concentrations of both fine dust (0.52-1.00 μm), an indicator of long-range transport, and coarse dust (1.00-8.00 μm) increased together every spring. Moreover, their concentrations increased drastically after 2000, corresponding to the recent increase in Asian dust outbreaks in spring. Additionally, an increase in the spring of 2001 corresponded to the largest dust storm recorded in east Asia since 1979. Therefore our findings imply that Asian dust strongly polluted Mount Wrangell every spring. The stratospheric tracer, tritium, had late spring maxima almost every year, and we found this useful for ice core dating to identify late spring in the North Pacific region. We also found that a high positive annual correlation existed between the calculated tritium and fine dust fluxes from late spring to summer. We propose that an annual relationship between the stratosphere-troposphere exchange and Asian dust storm are most closely connected in late spring because their activities are weak in summer. The Mount Wrangell ice core is important and useful for assessing the dust and tritium circulation in the distant past around the North Pacific with probable intra-annual timescale information.
Decameter Type IV Burst Associated with a Behind-the-limb CME Observed on 7 November 2013

NASA Astrophysics Data System (ADS)

Melnik, V. N.; Brazhenko, A. I.; Konovalenko, A. A.; Dorovskyy, V. V.; Rucker, H. O.; Panchenko, M.; Frantsuzenko, A. V.; Shevchuk, M. V.

2018-03-01

We report on the results of observations of a type IV burst made by the Ukrainian Radio interferometer of the Academy of Sciences (URAN-2) in the frequency range 22 - 33 MHz. The burst is associated with a coronal mass ejection (CME) initiated by a behind-the-limb active region (N05E151) and was also observed by the Nançay Decameter Array (NDA) radio telescope in the frequency band 30 - 60 MHz. The purpose of the article is the determination of the source of this type IV burst. After analysis of the observational data obtained with the URAN-2, the NDA, the Solar-Terrestrial Relations Observatory (STEREO) A and B spacecraft, and the Solar and Heliospheric Observatory (SOHO) spacecraft, we come to the conclusion that the source of the burst is the core of a behind-the-limb CME. We conclude that the radio emission can escape the center of the CME core at a frequency of 60 MHz and originates from the periphery of the core at a frequency of 30 MHz that is due to occultation by the solar corona at the corresponding frequencies. We find plasma densities in these regions assuming the plasma mechanism of radio emission. We show that the frequency drift of the start of the type IV burst is governed by an expansion of the CME core. The type III bursts that were observed against this type IV burst are shown to be generated by fast electrons propagating through the CME core plasma. A type II burst was registered at frequencies of 44 - 64 MHz and 3 - 16 MHz and was radiated by a shock with velocities of about 1000 km s^{-1} and 800 km s^{-1}, respectively.
On the Azimuthal Variation of Core Plasma in the Equatorial Magnetosphere

NASA Technical Reports Server (NTRS)

Gallagher, D. L.; Craven, P. D.; Comfort, R. H.; Moore, T. E.

1995-01-01

Previous results of plasmapause position surveys have been synthesized into a description of the underlying global distribution of plasmasphere-like or core plasma densities unique to a steady state magnetosphere. Under these steady conditions, the boundary between high- and low-density regions is taken to represent the boundary between diurnal near-corotation and large-scale circulation streamlines that traverse the entire magnetosphere. Results indicate a boundary that has a pronounced bulge in the dusk sector that is rotated westward and markedly reduced in size at increased levels of geomagnetic activity (and presumably magnetospheric convection). The derived profile is empirical confirmation of an underlying 'tear drop' distribution of core plasma, which is valid only for prolonged steady conditions and is somewhat different from that associated with the simple superposition of sunward flow and corotation, both in its detailed shape and in its varying orientation. Variation away from the tear drop profile suggests that magnetospheric circulation departs from a uniform flow field, having a radial dependence with respect to the Earth that is qualitatively consistent with electrostatic shielding of the convection electric field and which is rotated westward at increased levels of geophysical activity.
Geological Development of the Izu-Bonin Forearc Since the Eocene Based on Biostratigraphic, Rock Magnetic, and Sediment Provenance Observations from IODP Expedition 352 Drill Cores

NASA Astrophysics Data System (ADS)

Petronotis, K. E.; Robertson, A.; Kutterolf, S.; Avery, A.; Baxter, A.; Schindlbeck, J. C.; Wang, K. L.; Acton, G.

2016-12-01

International Ocean Discovery Program (IODP) Expedition 352 recovered early Oligocene to recent sediments above Eocene igneous basement at 4 sites in the Izu-Bonin Forearc. The sites were selected to investigate the forearc region since subduction initiation in the Eocene, with Sites U1439 and U1442 being cored into the upper trench slope and Sites U1440 and U1441 into the lower trench slope. Postcruise studies of biostratigraphy, sediment chemistry, tephra composition and chronology and magnetic properties, along with observations from prior coring help constrain the regional geological development. Volcanic activity in the area, as inferred from its influence on sediment composition, has varied between long periods of activity and quiescence. Combined whole-rock sediment chemistry and tephra compositions suggest that during the Oligocene to earliest Miocene ( 30-22 Ma) tuffaceous input of predominantly dacitic composition was mainly derived from the intra-oceanic Izu-Bonin Arc. The early Miocene interval ( 22-15 Ma) lacks tuffaceous input, as supported by rock magnetic data. During this period, the forearc subsided beneath the carbonate compensation depth (CCD), as evidenced by radiolarian-bearing mud and metal-rich silty clay. This was followed by input of tephra with bimodal felsic and mafic compositions from the Izu-Bonin Arc from 15 to 5 Ma. Middle Miocene to Quaternary time was characterized by increased carbonate preservation, coupled with abundant, predominantly felsic tephra input, which is chemically indicative of a Japan continental arc source (Honshu), with additional chemically distinctive input from the Izu-Bonin Arc. Extending back to 32 Ma, tephra layers can be correlated between the upper-slope sites, extrapolated to the less well-dated lower-slope sites, and further correlated with onland Japanese tephra (Kutterolf et al., 2016; Goldschmidt Conference). Overall, the new results provide an improved understanding of the regional tectonic evolution.
A Role for the GCC-Box in Jasmonate-Mediated Activation of the PDF1.2 Gene of Arabidopsis1

PubMed Central

Brown, Rebecca L.; Kazan, Kemal; McGrath, Ken C.; Maclean, Don J.; Manners, John M.

2003-01-01

The PDF1.2 gene of Arabidopsis encoding a plant defensin is commonly used as a marker for characterization of the jasmonate-dependent defense responses. Here, using PDF1.2 promoter-deletion lines linked to the β-glucoronidase-reporter gene, we examined putative promoter elements associated with jasmonate-responsive expression of this gene. Using stably transformed plants, we first characterized the extended promoter region that positively regulates basal expression from the PDF1.2 promoter. Second, using promoter deletion constructs including one from which the GCC-box region was deleted, we observed a substantially lower response to jasmonate than lines carrying this motif. In addition, point mutations introduced into the core GCC-box sequence substantially reduced jasmonate responsiveness, whereas addition of a 20-nucleotide-long promoter element carrying the core GCC-box and flanking nucleotides provided jasmonate responsiveness to a 35S minimal promoter. Taken together, these results indicated that the GCC-box plays a key role in conferring jasmonate responsiveness to the PDF1.2 promoter. However, deletion or specific mutations introduced into the core GCC-box did not completely abolish the jasmonate responsiveness of the promoter, suggesting that the other promoter elements lying downstream from the GCC-box region may also contribute to jasmonate responsiveness. In other experiments, we identified a jasmonate- and pathogen-responsive ethylene response factor transcription factor, AtERF2, which when overexpressed in transgenic Arabidopsis plants activated transcription from the PDF1.2, Thi2.1, and PR4 (basic chitinase) genes, all of which contain a GCC-box sequence in their promoters. Our results suggest that in addition to their roles in regulating ethylene-mediated gene expression, ethylene response factors also appear to play important roles in regulating jasmonate-responsive gene expression, possibly via interaction with the GCC-box. PMID:12805630
Hurricane-related air-sea interactions, circulation modifications, and coastal impacts on the eastern Louisiana coastline

NASA Astrophysics Data System (ADS)

Walker, N. D.; Pilley, C.; Li, C.; Liu, B.; Leben, R. R.; Raghunthan, V.; Ko, D.; Teague, W. J.

2012-12-01

Beginning in 1995, Atlantic hurricane activity increased significantly relative to the 1970s and 1980s. In 2005, records were broken when two hurricanes intensified rapidly to Category 5 for a period of time within the Gulf of Mexico, later landed, and flooded vast expanses of Louisiana's coastal regions within the span of 30 days. In this study, we investigate major hurricane events (including 2005) to elucidate air-sea interactions pertinent to hurricane intensity changes, shelf circulation, coastal flooding, and coastal land losses. We employ satellite measurements from passive sensors (temperature, true color, pigments) and active sensors (scatterometers, altimeters) in tandem with in-situ measurements from WAVCIS, NDBC, USGS, and NRL, as well as dedicated field campaigns along the coast. A selection of hurricane events during the 1998 to 2008 time period are used in this investigation. Research has shown that the Loop Current and its warm-core anticyclonic eddies (with high heat content) can intensify hurricanes transiting the Gulf; whereas, the cold-core cyclonic eddies (which are upwelling regions) can weaken hurricanes. Hurricane winds can intensify cold-core cyclonic eddies, which in some cases can impact outer shelf currents, mixing, and thermal structure throughout the water column. The exceptionally strong winds and waves in the northeast quadrant of these cyclonic atmospheric storms drive strong and long-lived westward currents. Storm surges and/or set-up of 2-6 m commonly occur along the Louisiana coastline, sometimes as a result of hurricanes traveling across the central Gulf of Mexico, at great distances from the coastal region experiencing the flooding (e.g. Hurricanes Rita and Gustav). The eastern shelf, north of the Mississippi River Birdfoot Delta, is particularly vulnerable to water level set-up and storm surge intensification due to the coastal orientation that causes the trapping of water. This area experienced land loss of 169 km2, or ~20%, due to extreme winds, waves and a storm surge of at least 6 m during Hurricane Katrina.
Understanding post-operative temperature drop in cardiac surgery: a mathematical model.

PubMed

Tindall, M J; Peletier, M A; Severens, N M W; Veldman, D J; de Mol, B A J M

2008-12-01

A mathematical model is presented to understand heat transfer processes during the cooling and re-warming of patients during cardiac surgery. Our compartmental model is able to account for many of the qualitative features observed in the cooling of various regions of the body including the central core containing the majority of organs, the rectal region containing the intestines and the outer peripheral region of skin and muscle. In particular, we focus on the issue of afterdrop: a drop in core temperature following patient re-warming, which can lead to serious post-operative complications. Model results for a typical cooling and re-warming procedure during surgery are in qualitative agreement with experimental data in producing the afterdrop effect and the observed dynamical variation in temperature between the core, rectal and peripheral regions. The influence of heat transfer processes and the volume of each compartmental region on the afterdrop effect is discussed. We find that excess fat on the peripheral and rectal regions leads to an increase in the afterdrop effect. Our model predicts that, by allowing constant re-warming after the core temperature has been raised, the afterdrop effect will be reduced.
High-resolution imaging and near-infrared spectroscopy of penumbral decay

NASA Astrophysics Data System (ADS)

Verma, M.; Denker, C.; Balthasar, H.; Kuckein, C.; Rezaei, R.; Sobotka, M.; Deng, N.; Wang, H.; Tritschler, A.; Collados, M.; Diercke, A.; González Manrique, S. J.

2018-06-01

Aims: Combining high-resolution spectropolarimetric and imaging data is key to understanding the decay process of sunspots as it allows us to scrutinize the velocity and magnetic fields of sunspots and their surroundings. Methods: Active region NOAA 12597 was observed on 2016 September 24 with the 1.5-meter GREGOR solar telescope using high-spatial-resolution imaging as well as imaging spectroscopy and near-infrared (NIR) spectropolarimetry. Horizontal proper motions were estimated with local correlation tracking, whereas line-of-sight (LOS) velocities were computed with spectral line fitting methods. The magnetic field properties were inferred with the "Stokes Inversions based on Response functions" (SIR) code for the Si I and Ca I NIR lines. Results: At the time of the GREGOR observations, the leading sunspot had two light bridges indicating the onset of its decay. One of the light bridges disappeared, and an elongated, dark umbral core at its edge appeared in a decaying penumbral sector facing the newly emerging flux. The flow and magnetic field properties of this penumbral sector exhibited weak Evershed flow, moat flow, and horizontal magnetic field. The penumbral gap adjacent to the elongated umbral core and the penumbra in that penumbral sector displayed LOS velocities similar to granulation. The separating polarities of a new flux system interacted with the leading and central part of the already established active region. As a consequence, the leading spot rotated 55° clockwise over 12 h. Conclusions: In the high-resolution observations of a decaying sunspot, the penumbral filaments facing the flux emergence site contained a darkened area resembling an umbral core filled with umbral dots. This umbral core had velocity and magnetic field properties similar to the sunspot umbra. This implies that the horizontal magnetic fields in the decaying penumbra became vertical as observed in flare-induced rapid penumbral decay, but on a very different time-scale.
Isolated core training improves sprint performance in national-level junior swimmers.

PubMed

Weston, Matthew; Hibbs, Angela E; Thompson, Kevin G; Spears, Iain R

2015-03-01

To quantify the effects of a 12-wk isolated core-training program on 50-m front-crawl swim time and measures of core musculature functionally relevant to swimming. Twenty national-level junior swimmers (10 male and 10 female, 16±1 y, 171±5 cm, 63±4 kg) participated in the study. Group allocation (intervention [n=10], control [n=10]) was based on 2 preexisting swim-training groups who were part of the same swimming club but trained in different groups. The intervention group completed the core training, incorporating exercises targeting the lumbopelvic complex and upper region extending to the scapula, 3 times/wk for 12 wk. While the training was performed in addition to the normal pool-based swimming program, the control group maintained their usual pool-based swimming program. The authors made probabilistic magnitude-based inferences about the effect of the core training on 50-m swim time and functionally relevant measures of core function. Compared with the control group, the core-training intervention group had a possibly large beneficial effect on 50-m swim time (-2.0%; 90% confidence interval -3.8 to -0.2%). Moreover, it showed small to moderate improvements on a timed prone-bridge test (9.0%; 2.1-16.4%) and asymmetric straight-arm pull-down test (23.1%; 13.7-33.4%), and there were moderate to large increases in peak EMG activity of core musculature during isolated tests of maximal voluntary contraction. This is the first study to demonstrate a clear beneficial effect of isolated core training on 50-m front-crawl swim performance.
Polarity reversals and tilt of the Earth's magnetic dipole

NASA Technical Reports Server (NTRS)

Dolginov, A. Z.

1993-01-01

There is evidence that the terrestrial magnetic field is connected with the Earth's mantle: (1) there are magnetic anomalies that do not take part in the westward drift of the main field, but are fixed with respect to the mantle; (2) the geomagnetic pole position flips in a particular way by preferred meridional paths during a reversal; and (3) magnetic polarity reversals are correlated with the activations of geological processes. These facts may be explained if we take into account that a significant horizontal temperature gradient can exist in the top levels of the liquid core because of the different thermoconductivity of the different areas of the core-mantle boundary. These temperature inhomogeneities can penetrate the core because fluxes along the core boundary (the thermal wind) can be strongly suppressed by a small redistribution of the chemical composition in the top of the core. The nonparallel gradients of the temperature, density, and composition on the top of the core create a curled electric field that produces a current and a magnetic field. This seed-field can be amplified by motions in the core. The resulting field does not forget the seed-field distribution and in this way the field on the Earth surface (that can be created only in regions with high conductivity, i.e. in the core) is connected with the core-mantle boundary. Contrary to the usual approach to the dynamo problem, we will take into account that the seed field of thermoelectric origin is acting not only at some initial moment of time but permanently.
Neuroscience of inhibition for addiction medicine: From prediction of initiation to prediction of relapse

PubMed Central

Moeller, Scott J.; Bederson, Lucia; Alia-Klein, Nelly; Goldstein, Rita Z.

2017-01-01

A core deficit in drug addiction is the inability to inhibit maladaptive drug-seeking behavior. Consistent with this deficit, drug-addicted individuals show reliable cross-sectional differences from healthy non-addicted controls during tasks of response inhibition accompanied by brain activation abnormalities as revealed by functional neuroimaging. However, it is less clear whether inhibition-related deficits predate the transition to problematic use, and, in turn, whether these deficits predict the transition out of problematic substance use. Here, we review longitudinal studies of response inhibition in children/adolescents with little substance experience and longitudinal studies of already-addicted individuals attempting to sustain abstinence. Results show that response inhibition, and its underlying neural correlates, predict both substance use outcomes (onset and abstinence). Neurally, key roles were observed for multiple regions of the frontal cortex (e.g., inferior frontal gyrus, dorsal anterior cingulate cortex, and dorsolateral prefrontal cortex). In general, less activation of these regions during response inhibition predicted not only the onset of substance use, but interestingly, also better abstinence-related outcomes among individuals already addicted. The role of subcortical areas, although potentially important, is less clear because of inconsistent results and because these regions are less classically reported in studies of healthy response inhibition. Overall, this review indicates that response inhibition is not simply a manifestation of current drug addiction, but rather a core neurocognitive dimension that predicts key substance use outcomes. Early intervention in inhibitory deficits could have high clinical and public health relevance. PMID:26806776
A 100 000-year record of annual and seasonal rainfall and temperature for northwestern Australia based on a pollen record obtained offshore

NASA Astrophysics Data System (ADS)

van der Kaars, Sander; de Deckker, Patrick; Gingele, Franz X.

2006-12-01

Pollen recovered from core tops of deep-sea cores from offshore northwestern Western Australia were used to build climatic transfer functions applied to sediment samples from major rivers bordering the ocean in the same region and a deep-sea core offshore Northwest Cape. Results show for the last 100 000 years, with a gap in the record spanning the 64 000 to 46 000 years interval, that from about 100 000 to 82 000 yr BP, climatic conditions represented by rainfall, temperature and number of humid months, were significantly higher than today's values. For the entire record, the coldest period occurred about 43 000 to 39 000 yr BP but it was wetter than today, whereas the Last Glacial Maximum saw a significant reduction in summer rainfall, interpreted as a result of the absence of monsoonal activity in the region. The Holocene can be divided into two distinct phases: one peaking around 6000 cal. yr BP with highest rainfall and summer temperatures; the second one commencing at 5000 cal. yr BP and showing a progressive decrease in summer rainfall in contrast to an increase in winter rainfall, paralleled by a progressive decrease in temperatures. Copyright
Enhancing the methanol tolerance of platinum nanoparticles for the cathode reaction of direct methanol fuel cells through a geometric design.

PubMed

Feng, Yan; Ye, Feng; Liu, Hui; Yang, Jun

2015-11-18

Mastery over the structure of nanoparticles might be an effective way to enhance their performance for a given application. Herein we demonstrate the design of cage-bell nanostructures to enhance the methanol tolerance of platinum (Pt) nanoparticles while remaining their catalytic activity for oxygen reduction reaction. This strategy starts with the synthesis of core-shell-shell nanoparticles with Pt and silver (Ag) residing respectively in the core and inner shell regions, which are then agitated with saturated sodium chloride (NaCl) solution to eliminate the Ag component from the inner shell region, leading to the formation of bimetallic nanoparticles with a cage-bell structure, defined as a movable Pt core enclosed by a metal shell with nano-channels, which exhibit superior methanol-tolerant property in catalyzing oxygen reduction reaction due to the different diffusion behaviour of methanol and oxygen in the porous metal shell of cage-bell structured nanoparticles. In particular, the use of remarkably inexpensive chemical agent (NaCl) to promote the formation of cage-bell structured particles containing a wide spectrum of metal shells highlights its engineering merit to produce highly selective electrocatalysts on a large scale for the cathode reaction of direct methanol fuel cells.
The neural correlates of dreaming

PubMed Central

Siclari, F.; Baird, B.; Perogamvros, L.; Bernardi, G.; LaRocque, J. J.; Riedner, B.; Boly, M.; Postle, B. R.; Tononi, G.

2017-01-01

Consciousness never fades during wake. However, if awakened from sleep, sometimes we report dreams and sometimes no experiences. Traditionally, dreaming has been identified with REM sleep, characterized by a wake-like, globally ‘activated’, high-frequency EEG. However, dreaming also occurs in NREM sleep, characterized by prominent low-frequency activity. This challenges our understanding of the neural correlates of conscious experiences in sleep. Using high-density EEG, we contrasted the presence and absence of dreaming within NREM and REM sleep. In both NREM and REM sleep, reports of dream experience were associated with a local decrease in low-frequency activity in posterior cortical regions. High-frequency activity within these regions correlated with specific dream contents. Monitoring this posterior ‘hot zone’ predicted whether an individual reported dreaming or the absence of experiences during NREM sleep in real time, suggesting that it may constitute a core correlate of conscious experiences in sleep. PMID:28394322
Identification of both copy number variation-type and constant-type core elements in a large segmental duplication region of the mouse genome

PubMed Central

2013-01-01

Background Copy number variation (CNV), an important source of diversity in genomic structure, is frequently found in clusters called CNV regions (CNVRs). CNVRs are strongly associated with segmental duplications (SDs), but the composition of these complex repetitive structures remains unclear. Results We conducted self-comparative-plot analysis of all mouse chromosomes using the high-speed and large-scale-homology search algorithm SHEAP. For eight chromosomes, we identified various types of large SD as tartan-checked patterns within the self-comparative plots. A complex arrangement of diagonal split lines in the self-comparative-plots indicated the presence of large homologous repetitive sequences. We focused on one SD on chromosome 13 (SD13M), and developed SHEPHERD, a stepwise ab initio method, to extract longer repetitive elements and to characterize repetitive structures in this region. Analysis using SHEPHERD showed the existence of 60 core elements, which were expected to be the basic units that form SDs within the repetitive structure of SD13M. The demonstration that sequences homologous to the core elements (>70% homology) covered approximately 90% of the SD13M region indicated that our method can characterize the repetitive structure of SD13M effectively. Core elements were composed largely of fragmented repeats of a previously identified type, such as long interspersed nuclear elements (LINEs), together with partial genic regions. Comparative genome hybridization array analysis showed that whereas 42 core elements were components of CNVR that varied among mouse strains, 8 did not vary among strains (constant type), and the status of the others could not be determined. The CNV-type core elements contained significantly larger proportions of long terminal repeat (LTR) types of retrotransposon than the constant-type core elements, which had no CNV. The higher divergence rates observed in the CNV-type core elements than in the constant type indicate that the CNV-type core elements have a longer evolutionary history than constant-type core elements in SD13M. Conclusions Our methodology for the identification of repetitive core sequences simplifies characterization of the structures of large SDs and detailed analysis of CNV. The results of detailed structural and quantitative analyses in this study might help to elucidate the biological role of one of the SDs on chromosome 13. PMID:23834397
Effect of attractive interactions on the water-like anomalies of a core-softened model potential.

PubMed

Pant, Shashank; Gera, Tarun; Choudhury, Niharendu

2013-12-28

It is now well established that water-like anomalies can be reproduced by a spherically symmetric potential with two length scales, popularly known as core-softened potential. In the present study we aim to investigate the effect of attractive interactions among the particles in a model fluid interacting with core-softened potential on the existence and location of various water-like anomalies in the temperature-pressure plane. We employ extensive molecular dynamic simulations to study anomalous nature of various order parameters and properties under isothermal compression. Order map analyses have also been done for all the potentials. We observe that all the systems with varying depth of attractive wells show structural, dynamic, and thermodynamic anomalies. As many of the previous studies involving model water and a class of core softened potentials have concluded that the structural anomaly region encloses the diffusion anomaly region, which in turn, encloses the density anomaly region, the same pattern has also been observed in the present study for the systems with less depth of attractive well. For the systems with deeper attractive well, we observe that the diffusion anomaly region shifts toward higher densities and is not always enclosed by the structural anomaly region. Also, density anomaly region is not completely enclosed by diffusion anomaly region in this case.
Dwelling quietly in the rich club: brain network determinants of slow cortical fluctuations

PubMed Central

Gollo, Leonardo L.; Zalesky, Andrew; Hutchison, R. Matthew; van den Heuvel, Martijn; Breakspear, Michael

2015-01-01

For more than a century, cerebral cartography has been driven by investigations of structural and morphological properties of the brain across spatial scales and the temporal/functional phenomena that emerge from these underlying features. The next era of brain mapping will be driven by studies that consider both of these components of brain organization simultaneously—elucidating their interactions and dependencies. Using this guiding principle, we explored the origin of slowly fluctuating patterns of synchronization within the topological core of brain regions known as the rich club, implicated in the regulation of mood and introspection. We find that a constellation of densely interconnected regions that constitute the rich club (including the anterior insula, amygdala and precuneus) play a central role in promoting a stable, dynamical core of spontaneous activity in the primate cortex. The slow timescales are well matched to the regulation of internal visceral states, corresponding to the somatic correlates of mood and anxiety. In contrast, the topology of the surrounding ‘feeder’ cortical regions shows unstable, rapidly fluctuating dynamics likely to be crucial for fast perceptual processes. We discuss these findings in relation to psychiatric disorders and the future of connectomics. PMID:25823864

Reacquisition of cocaine conditioned place preference and its inhibition by previous social interaction preferentially affect D1-medium spiny neurons in the accumbens corridor.

PubMed

Prast, Janine M; Schardl, Aurelia; Schwarzer, Christoph; Dechant, Georg; Saria, Alois; Zernig, Gerald

2014-01-01

We investigated if counterconditioning with dyadic (i.e., one-to-one) social interaction, a strong inhibitor of the subsequent reacquisition of cocaine conditioned place preference (CPP), differentially modulates the activity of the diverse brain regions oriented along a mediolateral corridor reaching from the interhemispheric sulcus to the anterior commissure, i.e., the nucleus of the vertical limb of the diagonal band, the medial septal nucleus, the major island of Calleja, the intermediate part of the lateral septal nucleus, and the medial accumbens shell and core. We also investigated the involvement of the lateral accumbens core and the dorsal caudate putamen. The anterior cingulate 1 (Cg1) region served as a negative control. Contrary to our expectations, we found that all regions of the accumbens corridor showed increased expression of the early growth response protein 1 (EGR1, Zif268) in rats 2 h after reacquisition of CPP for cocaine after a history of cocaine CPP acquisition and extinction. Previous counterconditioning with dyadic social interaction inhibited both the reacquisition of cocaine CPP and the activation of the whole accumbens corridor. EGR1 activation was predominantly found in dynorphin-labeled cells, i.e., presumably D1 receptor-expressing medium spiny neurons (D1-MSNs), with D2-MSNs (immunolabeled with an anti-DRD2 antibody) being less affected. Cholinergic interneurons or GABAergic interneurons positive for parvalbumin, neuropeptide Y or calretinin were not involved in these CPP-related EGR1 changes. Glial cells did not show any EGR1 expression either. The present findings could be of relevance for the therapy of impaired social interaction in substance use disorders, depression, psychosis, and autism spectrum disorders.
Reacquisition of cocaine conditioned place preference and its inhibition by previous social interaction preferentially affect D1-medium spiny neurons in the accumbens corridor

PubMed Central

Prast, Janine M.; Schardl, Aurelia; Schwarzer, Christoph; Dechant, Georg; Saria, Alois; Zernig, Gerald

2014-01-01

We investigated if counterconditioning with dyadic (i.e., one-to-one) social interaction, a strong inhibitor of the subsequent reacquisition of cocaine conditioned place preference (CPP), differentially modulates the activity of the diverse brain regions oriented along a mediolateral corridor reaching from the interhemispheric sulcus to the anterior commissure, i.e., the nucleus of the vertical limb of the diagonal band, the medial septal nucleus, the major island of Calleja, the intermediate part of the lateral septal nucleus, and the medial accumbens shell and core. We also investigated the involvement of the lateral accumbens core and the dorsal caudate putamen. The anterior cingulate 1 (Cg1) region served as a negative control. Contrary to our expectations, we found that all regions of the accumbens corridor showed increased expression of the early growth response protein 1 (EGR1, Zif268) in rats 2 h after reacquisition of CPP for cocaine after a history of cocaine CPP acquisition and extinction. Previous counterconditioning with dyadic social interaction inhibited both the reacquisition of cocaine CPP and the activation of the whole accumbens corridor. EGR1 activation was predominantly found in dynorphin-labeled cells, i.e., presumably D1 receptor-expressing medium spiny neurons (D1-MSNs), with D2-MSNs (immunolabeled with an anti-DRD2 antibody) being less affected. Cholinergic interneurons or GABAergic interneurons positive for parvalbumin, neuropeptide Y or calretinin were not involved in these CPP-related EGR1 changes. Glial cells did not show any EGR1 expression either. The present findings could be of relevance for the therapy of impaired social interaction in substance use disorders, depression, psychosis, and autism spectrum disorders. PMID:25309368
Quantitative palaeodrainage analysis in the Pleistocene of the Po Plain (Italy)

NASA Astrophysics Data System (ADS)

Vezzoli, G.; Garzanti, E.; Sciunnach, D.

2009-04-01

During the Pleistocene, Po Plain deposits recorded repeated waxing and waning of Alpine ice caps, and thus provide an excellent opportunity to investigate the interactions between pronounced climatic fluctuations and background tectonic activity (Scardia et al., 2006), resulting in frequent changes of drainage patterns. A high-resolution Pleistocene stratigraphy, with a complete sedimentological, paleontological, petrographic-mineralogical, magneto-stratigraphic, and seismic data base, was recently obtained from eleven continuous cores drilled in the Lombardy Po Plain north of the Po River (ENI and Regione Lombardia, 2002). In the present study we focus on two cores in the proximal (Cilavegna) and distal plain (Pianengo), which best exemplify the drastic change in sedimentary systems and drainage patterns associated with the onset of major Pleistocene glaciations in the Alps (˜870ky; Muttoni et al., 2003). This climatic event is recorded by a regional unconformity (named R-unconformity by Muttoni et al., 2003), traced all across the Po Basin and encountered at -81 m depth in the Pianengo Core and at -98 m depth in the Cilavegna Core. The Cilavegna Core consists of metamorphiclastic floodplain sediments, capped by the R-unconformity and overlain by quartzofeldspathic braidplain deposits. The Pianengo Core consists of metamorphiclastic deltaic to floodpain sediments, capped by the R-unconformity and overlain by alluvial-fan gravels rich in carbonate pebbles; another unconformity at -39 m depth is overlain by metamorphiclastic braidplain deposits. Our quantitative approach to paleodrainage analysis is based on comprehensive information obtained from modern settings (Garzanti et al., 2004; 2006). End-member modelling and similarity analysis allows us to objectively compare detrital modes from modern and ancient deposits, and to reconstruct the evolution of sediment pathways through geologic time (Vezzoli and Garzanti 2009). The Cilavegna Core documents stepwise south-westward shifts of major tributaries draining the axial belt. The Pianengo Core records the rapid southward progradation of transverse alluvial fans fed locally from the Southern Alps, followed by progressive establishment of the modern Adda river system. Evolving drainage patterns and river avulsions represent a major cause of compositional change in foreland-basin deposits. Lateral shifts of river courses, commonly associated with unconformities and favoured by an increase in the ratio between sediment fluxes and subsidence, provide crucial information on tectonic or climatic events, and should be given full consideration in provenance studies. ENI and Regione Lombardia. 2002. Geologia degli acquiferi padani della Regione Lombardia. Firenze, Società Elaborazioni Cartografiche s.r.l., 130 p. Muttoni G., Carcano C., Garzanti E., Ghielmi M., Piccin A., Pini R., Rogledi S., and Sciunnach D. 2003. Onset of major Pleistocene glaciations in the Alps. Geology, 31, 989-992. Scardia G., Muttoni G., and Sciunnach D. 2006. Subsurface magnetostratigraphy of Pleistocene sediments from the Po Plain (Italy): constraints on rates of sedimentation and rock uplift. Geological Society of America Bulletin, 118, 1299-1312. Vezzoli G. and Garzanti E. 2009. Tracking paleodrainage in foreland-basin sequences. Journal of Geology, In press.
Waterlike anomalies in a two-dimensional core-softened potential

NASA Astrophysics Data System (ADS)

Bordin, José Rafael; Barbosa, Marcia C.

2018-02-01

We investigate the structural, thermodynamic, and dynamic behavior of a two-dimensional (2D) core-corona system using Langevin dynamics simulations. The particles are modeled by employing a core-softened potential which exhibits waterlike anomalies in three dimensions. In previous studies in a quasi-2D system a new region in the pressure versus temperature phase diagram of structural anomalies was observed. Here we show that for the two-dimensional case two regions in the pressure versus temperature phase diagram with structural, density, and diffusion anomalies are observed. Our findings indicate that, while the anomalous region at lower densities is due the competition between the two length scales in the potential at higher densities, the anomalous region is related to the reentrance of the melting line.
Rescuing the Cahoon Mine drill cores: Opportunities for modern mapping of the ca. 1.7 Ga Freedom Formation in southern Wisconsin

NASA Astrophysics Data System (ADS)

Stanley, V.; Stewart, E.

2016-12-01

Rock cores collected during historic mineral exploration can provide invaluable data for modern analyses, but only if the samples are properly curated. The Cahoon Mine operated in Baraboo, WI during the 1910's and produced iron ore from the ca. 1.7 Ga Freedom Formation. The Freedom Formation is part of the well-known Baraboo-interval stratigraphy and is only present in the subsurface of Wisconsin (Weidman, 1904). Seventeen exploratory drill cores were rescued by Wisconsin Geological and Natural History Survey (WGNHS) from the original drying house at the mine site. The condition of the containers endangered the stratigraphic context of the collection; identifiers and depth markings were often obscured or lost. The individual core pieces were coated in residue and dust. Most of what is known about the Freedom Formation is from core logs and master's theses from the early 1900's (Leith, 1935; Schmidt, 1951). Ongoing subsurface mapping of the Baraboo-interval sediments and underlying basement of southern Wisconsin integrates new and existing subsurface and regional geophysical datasets. Mapping involves calibrating unique signals in regional aeromagnetic data to known lithology from drill core and cuttings. The Freedom Formation is especially important in this process as its iron-rich composition and regional continuity causes it to have a somewhat unique signal in regional aeromagnetic data. The Cahoon Mine cores in the WGNHS repository are the most extensive collection of physical samples from the Freedom Formation still in existence. We are in the process of curating the cores to facilitate their use in ongoing bedrock mapping. Today the cost and logistics of extensive sampling of this unit makes the existing core collection irreplaceable. We transferred the material to new containers, digitally recorded metadata, and created archival labels. As a result of this effort, the Cahoon Mine cores are now stored in a format that is physically and digitally accessible.
The character and evolution of fault rocks from the Phase 3 SAFOD core and potential weakening mechanisms along the San Andreas Fault

NASA Astrophysics Data System (ADS)

Holdsworth, Robert; van Diggelen, E. W. E.; Spiers, C. J.; de Bresser, H.; Smith, S. A. F.; Bowen, L.

2010-05-01

In the region of the SAFOD borehole, the San Andreas Fault (SAF) separates two very different geological terranes referred to here as the Salinian and Great Valley blocks (SB, SVB). Whilst material was not collected from the SB-GVB terrane boundary, the cores preserve a diverse range of fault rocks. Not all of these necessarily formed at the same depth, although the amount of exhumation is likely fairly limited. The distribution of deformation is asymmetric, with a broad (200m wide) intensely deformed region developed in the GVB located NE of the terrane boundary; this includes two narrow zones of active creep that have deformed the borehole casing. Microstructurally, low strain domains (most of Core 1, significant parts of Core 3) preserve clear protolith structures, with highly localised evidence for classic upper crustal cataclastic brittle faulting processes and associated fluid flow. The GVB in particular shows clear geological evidence for both fluid pressure and differential stress cycling (variable modes of hydrofacture associated with faults) during seismicity. There is also evidence in all minor faults for the operation of solution-precipitation creep. High strain domains (much of Core 2, parts of Core 3) are characterised by the development of foliated cataclasites and gouge, with variable new growth of fine-grained, interconnected phyllosilicate networks (predominantly smectite-bearing mixed layer clays). Many of the gouges are characterised by the development of S-C fabrics and asymmetric folds. Reworking and reactivation is widespread manifested by: i) the preservation of one or more earlier generations of gouge preserved as clasts; and ii) by the development of later interconnected, polished and striated slip surfaces at low angles or sub-parallel to the foliation. These are coated with thin smectitic phyllosilicate films and are closely associated with the development of lozenge, arrow-head and triangular mineral veins (mostly calcite) precipitated in dilation sites during slip. Outwith of the actively creeping sections, mineral veins (mainly calcite, locally anhydrite) are widespread, with evidence for hydrofracturing events prior to, during and after local gouge-forming deformation episodes. Disseminated pyrite mineralisation is widespread and locally produces highly indurated sections of black, hard gouge. The gouges in the active creeping segments are different in three important respects: 1) mineral veins only occur as (or within) clasts; 2) pyrite mineralisation is limited; and 3) they carry numerous serpentinite clasts, some quite large (metre scale). The actively creeping gouges are also characterised by the most intense development of smectitic phyllosilicates. The SAFOD core fault rocks highlight the fundamental role played by fluid-rock interactions in upper crustal fault zones. There is clear evidence for the development of high pore fluid pressures (hydrofracture development), reaction weakening (phyllosilicate growth following cataclasis) and geometric weakening due to the development of weak interconnected layers (foliations, polished striated slip surfaces). There are also very significant similarities between the fault rocks seen here and those preserved along other deeply exhumed weak faults elsewhere in the world.
Implementing Cognitive Remediation Programs in France: The "Secret Sauce".

PubMed

Amado, Isabelle; Sederer, Lloyd I

2016-07-01

Cognitive remediation (CR) is a psychosocial therapy that seeks to restore patients' cognitive abilities by providing strategies to improve functioning in cognitive domains and helping them transfer acquired capabilities to everyday life. Since 2008, CR programs have been introduced in several regional health ministry areas in France. This column describes that implementation initiative, which includes creation of a network of the most active CR programs to conduct multicenter trials; establishment of a university degree in CR, awarded after completion of a one-year clinical training program; and implementation activities of regional health agencies. The authors describe three core elements of a "secret sauce"-a common language, timing, and leadership-that has helped ensure the success of the implementation efforts and that may be useful in other countries.
LCR 5' hypersensitive site specificity for globin gene activation within the active chromatin hub.

PubMed

Peterson, Kenneth R; Fedosyuk, Halyna; Harju-Baker, Susanna

2012-12-01

The DNaseI hypersensitive sites (HSs) of the human β-globin locus control region (LCR) may function as part of an LCR holocomplex within a larger active chromatin hub (ACH). Differential activation of the globin genes during development may be controlled in part by preferential interaction of each gene with specific individual HSs during globin gene switching, a change in conformation of the LCR holocomplex, or both. To distinguish between these possibilities, human β-globin locus yeast artificial chromosome (β-YAC) lines were produced in which the ε-globin gene was replaced with a second marked β-globin gene (β(m)), coupled to an intact LCR, a 5'HS3 complete deletion (5'ΔHS3) or a 5'HS3 core deletion (5'ΔHS3c). The 5'ΔHS3c mice expressed β(m)-globin throughout development; γ-globin was co-expressed in the embryonic yolk sac, but not in the fetal liver; and wild-type β-globin was co-expressed in adult mice. Although the 5'HS3 core was not required for β(m)-globin expression, previous work showed that the 5'HS3 core is necessary for ε-globin expression during embryonic erythropoiesis. A similar phenotype was observed in 5'HS complete deletion mice, except β(m)-globin expression was higher during primitive erythropoiesis and γ-globin expression continued into fetal definitive erythropoiesis. These data support a site specificity model of LCR HS-globin gene interaction.
TMI-2 upper-core particle bed thermal behavior

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kuan, P.

1987-08-01

Models of dryout heat fluxes of particle beds believed to be applicable to the TMI-2 upper-core particle bed are reviewed and developed. A simplified Lipinski model and a model based on flooding are shown to agree between themselves and with experiments. These models are applied to the calculation of the dryout heat flux of the TMI-2 upper-core particle bed. The TMI-2 upper-core particle bed is shown to be: (a) coolable, if little heat is transferred to it from the consolidated region below, (b) only marginally coolable, if not uncoolable, before material relocation from the consolidated region, if most of themore » heat in the consolidiated region is transferred to it, and (c) coolable, after the relocation, regardless of heat transfer from the remaining consolidated region. Based on an analogy to quenching experiments, which show that the heat flux during the quench of a particle bed is approximately equal to the dryout heat flux, the time required to quench the TMI-2 upper-core particle bed from 2000 K to the saturation temperature of water during the accident is estimated. The bed was either quenched by 225 min after the initiation of the accident (assuming no heat was transferred to it from the consolidated region) or, at the latest, by 245 min (20 min after molten material relocation to the lower plenum from the consolidated region; assuming most of the heat generated in the consolidated region, both before and after the relocation, was transferred to the particle bed).« less
INFERENCE OF HEATING PROPERTIES FROM “HOT” NON-FLARING PLASMAS IN ACTIVE REGION CORES. II. NANOFLARE TRAINS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Barnes, W. T.; Bradshaw, S. J.; Cargill, P. J., E-mail: will.t.barnes@rice.edu, E-mail: stephen.bradshaw@rice.edu, E-mail: p.cargill@imperial.ac.uk

2016-12-20

Despite its prediction over two decades ago, the detection of faint, high-temperature (“hot”) emission due to nanoflare heating in non-flaring active region cores has proved challenging. Using an efficient two-fluid hydrodynamic model, this paper investigates the properties of the emission expected from repeating nanoflares (a nanoflare train) of varying frequency as well as the separate heating of electrons and ions. If the emission measure distribution (EM(T)) peaks at T = T{sub m} , we find that EM(T{sub m}) is independent of details of the nanoflare train, and EM(T) above and below T{sub m} reflects different aspects of the heating. Belowmore » T{sub m} , the main influence is the relationship of the waiting time between successive nanoflares to the nanoflare energy. Above T{sub m}, power-law nanoflare distributions lead to an extensive plasma population not present in a mono-energetic train. Furthermore, in some cases, characteristic features are present in EM(T). Such details may be detectable given adequate spectral resolution and a good knowledge of the relevant atomic physics. In the absence of such resolution we propose some metrics that can be used to infer the presence of “hot” plasma.« less
Habitat assessment for giant pandas in the Qinling Mountain region of China

USGS Publications Warehouse

Feng, Tian-Tian; Van Manen, Frank T.; Zhao, Na-Xun; Li, Ming; Wei, Fu-Wen

2009-01-01

Because habitat loss and fragmentation threaten giant pandas (Ailuropoda melanoleuca), habitat protection and restoration are important conservation measures for this endangered species. However, distribution and value of potential habitat to giant pandas on a regional scale are not fully known. Therefore, we identified and ranked giant panda habitat in Foping Nature Reserve, Guanyinshan Nature Reserve, and adjacent areas in the Qinling Mountains of China. We used Mahalanobis distance and 11 digital habitat layers to develop a multivariate habitat signature associated with 247 surveyed giant panda locations, which we then applied to the study region. We identified approximately 128 km2 of giant panda habitat in Foping Nature Reserve (43.6% of the reserve) and 49 km2 in Guanyinshan Nature Reserve (33.6% of the reserve). We defined core habitat areas by incorporating a minimum patch-size criterion (5.5 km2) based on home-range size. Percentage of core habitat area was higher in Foping Nature Reserve (41.8% of the reserve) than Guanyinshan Nature Reserve (26.3% of the reserve). Within the larger analysis region, Foping Nature Reserve contained 32.7% of all core habitat areas we identified, indicating regional importance of the reserve. We observed a negative relationship between distribution of core areas and presence of roads and small villages. Protection of giant panda habitat at lower elevations and improvement of habitat linkages among core habitat areas are important in a regional approach to giant panda conservation.
Extending fullwave core ICRF simulation to SOL and antenna regions using FEM solver

NASA Astrophysics Data System (ADS)

Shiraiwa, S.; Wright, J. C.

2016-10-01

A full wave simulation approach to solve a driven RF waves problem including hot core, SOL plasmas and possibly antenna is presented. This approach allows for exploiting advantages of two different way of representing wave field, namely treating spatially dispersive hot conductivity in a spectral solver and handling complicated geometry in SOL/antenna region using an unstructured mesh. Here, we compute a mode set in each region with the RF electric field excitation on the connecting boundary between core and edge regions. A mode corresponding to antenna excitation is also computed. By requiring the continuity of tangential RF electric and magnetic fields, the solution is obtained as unique superposition of these modes. In this work, TORIC core spectral solver is modified to allow for mode excitation, and the edge region of diverted Alcator C-Mod plasma is modeled using COMSOL FEM package. The reconstructed RF field is similar in the core region to TORIC stand-alone simulation. However, it contains higher poloidal modes near the edge and captures a wave bounced and propagating in the poloidal direction near the vacuum-plasma boundary. These features could play an important role when the single power pass absorption is modest. This new capability will enable antenna coupling calculations with a realistic load plasma, including collisional damping in realistic SOL plasma and other loss mechanisms such as RF sheath rectification. USDoE Awards DE-FC02-99ER54512, DE-FC02-01ER54648.
Trials and Tribulations of Fluorescent Dissolved Organic Matter Chemical Interpretations: A case study of polar ice cores

NASA Astrophysics Data System (ADS)

D'Andrilli, J.

2017-12-01

Excitation emission matrix fluorescence spectroscopy is widely applied for rapid dissolved organic matter (DOM) characterization in aquatic systems. Fluorescent DOM surveys are booming, not only as a central focus in aquatic environments, but also as an important addition to interdisciplinary research (e.g., DOM analysis in concert with ice core paleoclimate reconstructions, stream metabolism, hydrologic regimes, agricultural developments, and biological activity), opening new doors, not just for novelty, but also for more challenges with chemical interpretations. Recently, the commonly used protein- versus humic-like classifications of DOM have been ineffective at describing DOM chemistry in various systems (e.g., ice cores, wastewaters, incubations/engineered). Moreover, the oversimplification of such classifications used to describe fluorescing components, without further scrutiny, has become commonplace, ultimately producing vague reporting. For example, West Antarctic ice core DOM was shown to contain fluorescence in the low excitation/emission wavelength region, however resolved fluorophores depicting tyrosine- and tryptophan-like DOM were not observed. At first, as literature suggested, we reported this result as protein-like, and concluded that microbial contributions were dominant in deep ice. That initial interpretation would disintegrate the conservation paradigm of atmospheric composition during deposition, the crux of ice core research, and contradict other lines of evidence. This begged the question, "How can we describe DOM chemistry without distinct fluorophores?" Antarctic ice core DOM was dominated by neither tyrosine- nor tryptophan-like fluorescence, causing "unusual" looking fluorescent components. After further examination, deep ice DOM was reported to contain fluorescent species most similar to monolignols and tannin-like phenols, describing the precursors of lignin from low carbon producing environments, consistent with marine sediment records. Currently, we are working towards more detailed descriptions of fluorescence, thus accepting variation in and around protein- and humic-like regions, and achieving robust chemical interpretations of DOM chemistry, ultimately providing insight to its interwoven nature in the environment.
Core promoter mutations 3 years after anti-hepatitis B e seroconversion in patients with chronic hepatitis B or hepatitis B and C infection and cancer remission.

PubMed

Zampino, Rosa; Marrone, Aldo; Karayiannis, Peter; Cirillo, Grazia; del Giudice, Emanuele Miraglia; Rania, Giovanni; Utili, Riccardo; Ruggiero, Giuseppe

2002-09-01

In this study, we aimed to evaluate the persistence of hepatitis B virus (HBV) DNA and the role of HBV core promoter and precore region mutations in 28 young cancer survivor patients with HBV or HBV and hepatitis C virus (HCV) infections, and persistently normal ALT levels, after spontaneous or interferon (IFN)-induced anti-hepatitis B e (HBe) seroconversion. Sera from 15 patients with HBV and 13 with dual HBV-HCV infection were analyzed for the presence of HBV-DNA and HCV-RNA by polymerase chain reaction 3 yr after anti-HBe seroconversion. A total of 21 patients had seroconverted spontaneously and seven did so after IFN treatment. The core promoter and the precore regions were amplified sequenced directly. Among patients with HBV infection, HBV-DNA was detected in five of nine (55%) with spontaneous anti-HBe and in all six treated patients (p = 0.092). In the coinfected patients, four had cleared both HBV-DNA and HCV-RNA, five were HBV-DNA negative/HCV-RNA positive and four had the reverse viral pattern. Among the 15 patients with persistence of HBV-DNA, a 7-base pair nucleotide deletion in the core promoter (1757-1763) was present in seven of 10 patients with spontaneous and in one of five patients with IFN-induced seroconversion (p = 0.033). The G1896A precore stop codon mutation was never observed. HBV-DNA levels were significantly lower in patients with the core promoter deletion (p = 0.011). The 7-base pair deletion generated a truncated X protein at amino-acid position 132. A core promoter deletion after anti-HBe seroconversion was associated with low HBV-DNA levels, probably because of downregulation of pregenomic RNA production and truncation of the X protein. HBV-DNA persistence was a frequent event, even in the absence of active liver disease.
Neural mechanism underlying autobiographical memory modulated by remoteness and emotion

NASA Astrophysics Data System (ADS)

Ge, Ruiyang; Fu, Yan; Wang, DaHua; Yao, Li; Long, Zhiying

2012-03-01

Autobiographical memory is the ability to recollect past events from one's own life. Both emotional tone and memory remoteness can influence autobiographical memory retrieval along the time axis of one's life. Although numerous studies have been performed to investigate brain regions involved in retrieving processes of autobiographical memory, the effect of emotional tone and memory age on autobiographical memory retrieval remains to be clarified. Moreover, whether the involvement of hippocampus in consolidation of autobiographical events is time dependent or independent has been controversial. In this study, we investigated the effect of memory remoteness (factor1: recent and remote) and emotional valence (factor2: positive and negative) on neural correlates underlying autobiographical memory by using functional magnetic resonance imaging (fMRI) technique. Although all four conditions activated some common regions known as "core" regions in autobiographical memory retrieval, there are some other regions showing significantly different activation for recent versus remote and positive versus negative memories. In particular, we found that bilateral hippocampal regions were activated in the four conditions regardless of memory remoteness and emotional valence. Thus, our study confirmed some findings of previous studies and provided further evidence to support the multi-trace theory which believes that the role of hippocampus involved in autobiographical memory retrieval is time-independent and permanent in memory consolidation.
Accumulation rate and mixing of shelf sediments in the Monterey Bay National Marine Sanctuary

USGS Publications Warehouse

Lewis, R.C.; Coale, K.H.; Edwards, B.D.; Marot, M.; Douglas, J.N.; Burton, E.J.

2002-01-01

The distribution of excess 210Pb in 31 sediment cores was used to determine modern (last 100 yr) mass accumulation rates and the depth of sediment mixing on the continental shelf between Pacifica and Monterey, California, USA. Apparent mass accumulation rates average 0.27 g cm-2 yr-1 and range from 0.42 g cm-2 yr-1 to 0.12 g cm-2 yr-1. Accumulation rates were highest at mid-shelf water depths (60-100 m) adjacent to major rivers and near the head of the Ascension submarine canyon. Cores from water depths of less than 65 m had low, uniform 210Pb activity profiles and sandy textures. The uppermost 5-13 cm of 15 cores had uniform 210Pb activity profiles above a region of steadily decreasing 210Pb activity. This phenomenon was attributed to sediment mixing. The thickness of this upper layer of uniform 210Pb activity decreased southward from 13 cm, west of Pacifica, to less than 5 cm, near Monterey Canyon. This southward decrease may be attributed to shallower bioturbation in the southern study area. Integrated excess 210Pb activities were generally higher where sedimentation rates were high. They were also higher with increasing distance from major rivers. Thus, sedimentation rate alone does not explain the distribution of integrated excess 210Pb in this study area. Excess 210Pb in the seafloor is controlled by other factors such as sediment texture, the atmospheric deposition rate of 210Pb, and the residence time of sediment particles in the water column. ?? 2002 Elsevier Science B.V. All rights reserved.
GRAVITATIONAL ACCRETION OF PARTICLES ONTO MOONLETS EMBEDDED IN SATURN's RINGS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yasui, Yuki; Ohtsuki, Keiji; Daisaka, Hiroshi, E-mail: y.yasui@whale.kobe-u.ac.jp, E-mail: ohtsuki@tiger.kobe-u.ac.jp

2014-12-20

Using a local N-body simulation, we examine gravitational accretion of ring particles onto moonlet cores in Saturn's rings. We find that gravitational accretion of particles onto moonlet cores is unlikely to occur in the C ring and probably difficult in the inner B ring as well provided that the cores are rigid water ice. Dependence of particle accretion on ring thickness changes when the radial distance from the planet and/or the density of particles is varied: the former determines the size of the core's Hill radius relative to its physical size, while the latter changes the effect of self-gravity ofmore » accreted particles. We find that particle accretion onto high-latitude regions of the core surface can occur even if the rings' vertical thickness is much smaller than the core radius, although redistribution of particles onto the high-latitude regions would not be perfectly efficient in outer regions of the rings such as the outer A ring, where the size of the core's Hill sphere in the vertical direction is significantly larger than the core's physical radius. Our results suggest that large boulders recently inferred from observations of transparent holes in the C ring are not formed locally by gravitational accretion, while propeller moonlets in the A ring would be gravitational aggregates formed by particle accretion onto dense cores. Our results also imply that the main bodies of small satellites near the outer edge of Saturn's rings may have been formed in rather thin rings.« less
WIDE-FIELD INFRARED POLARIMETRY OF THE ρ OPHIUCHI CLOUD CORE

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kwon, Jungmi; Tamura, Motohide; Kusakabe, Nobuhiko

2015-09-15

We conducted wide and deep simultaneous JHK{sub s}-band imaging polarimetry of the ρ Ophiuchi cloud complex. Aperture polarimetry in the JHK{sub s} band was conducted for 2136 sources in all three bands, of which 322 sources have significant polarizations in all the JHK{sub s} bands and have been used for a discussion of the core magnetic fields. There is a positive correlation between degrees of polarization and H − K{sub s} color up to H − K{sub s} ≈ 3.5. The magnetic field structures in the core region are revealed up to at least A{sub V} ≈ 47 mag andmore » are unambiguously defined in each sub-region (core) of Oph-A, Oph-B, Oph-C, Oph-E, Oph-F, and Oph-AC. Their directions, degrees of polarization, and polarization efficiencies differ but their changes are gradual; thus, the magnetic fields appear to be connected from core to core, rather than as a simple overlap of the different cloud core components. Comparing our results with the large-scale field structures obtained from previous optical polarimetric studies, we suggest that the magnetic field structures in the core were distorted by the cluster formation in this region, which may have been induced by shock compression due to wind/radiation from the Scorpius–Centaurus association.« less
What if? Neural activity underlying semantic and episodic counterfactual thinking.

PubMed

Parikh, Natasha; Ruzic, Luka; Stewart, Gregory W; Spreng, R Nathan; De Brigard, Felipe

2018-05-25

Counterfactual thinking (CFT) is the process of mentally simulating alternative versions of known facts. In the past decade, cognitive neuroscientists have begun to uncover the neural underpinnings of CFT, particularly episodic CFT (eCFT), which activates regions in the default network (DN) also activated by episodic memory (eM) recall. However, the engagement of DN regions is different for distinct kinds of eCFT. More plausible counterfactuals and counterfactuals about oneself show stronger activity in DN regions compared to implausible and other- or object-focused counterfactuals. The current study sought to identify a source for this difference in DN activity. Specifically, self-focused counterfactuals may also be more plausible, suggesting that DN core regions are sensitive to the plausibility of a simulation. On the other hand, plausible and self-focused counterfactuals may involve more episodic information than implausible and other-focused counterfactuals, which would imply DN sensitivity to episodic information. In the current study, we compared episodic and semantic counterfactuals generated to be plausible or implausible against episodic and semantic memory reactivation using fMRI. Taking multivariate and univariate approaches, we found that the DN is engaged more during episodic simulations, including eM and all eCFT, than during semantic simulations. Semantic simulations engaged more inferior temporal and lateral occipital regions. The only region that showed strong plausibility effects was the hippocampus, which was significantly engaged for implausible CFT but not for plausible CFT, suggestive of binding more disparate information. Consequences of these findings for the cognitive neuroscience of mental simulation are discussed. Published by Elsevier Inc.
Brain system for mental orientation in space, time, and person.

PubMed

Peer, Michael; Salomon, Roy; Goldberg, Ilan; Blanke, Olaf; Arzy, Shahar

2015-09-01

Orientation is a fundamental mental function that processes the relations between the behaving self to space (places), time (events), and person (people). Behavioral and neuroimaging studies have hinted at interrelations between processing of these three domains. To unravel the neurocognitive basis of orientation, we used high-resolution 7T functional MRI as 16 subjects compared their subjective distance to different places, events, or people. Analysis at the individual-subject level revealed cortical activation related to orientation in space, time, and person in a precisely localized set of structures in the precuneus, inferior parietal, and medial frontal cortex. Comparison of orientation domains revealed a consistent order of cortical activity inside the precuneus and inferior parietal lobes, with space orientation activating posterior regions, followed anteriorly by person and then time. Core regions at the precuneus and inferior parietal lobe were activated for multiple orientation domains, suggesting also common processing for orientation across domains. The medial prefrontal cortex showed a posterior activation for time and anterior for person. Finally, the default-mode network, identified in a separate resting-state scan, was active for all orientation domains and overlapped mostly with person-orientation regions. These findings suggest that mental orientation in space, time, and person is managed by a specific brain system with a highly ordered internal organization, closely related to the default-mode network.

In situ TEM and analytical STEM studies of ZnO nanotubes with Sn cores and Sn nanodrops

NASA Astrophysics Data System (ADS)

Ortega, Y.; Jäger, W.; Piqueras, J.; Häussler, D.; Fernández, P.

2013-10-01

ZnO nanorods with Sn core regions grown by a thermal evaporation-deposition method from a mixture of SnO2 and ZnS powders as precursors, are used to study the behaviour of liquid metal in the nanotubes' core regions and the formation of liquid metal nanodrops at the tube ends by in situ TEM experiments. The compositions of the core materials and of the nanodrops were assessed by employing HAADF-STEM imaging and spatially resolved EDXS measurements. By applying variable thermal load through changing the electron-beam flux of the electron microscope, melting of the metallic core can be induced and the behaviour of the liquid metal of the nanorods can be monitored locally. Within the nanorod core, melting and reversible thermal expansion and contraction of Sn core material is reproducibly observed. For nanotubes with core material near-tip regions, a nanodrop emerges from the tip upon melting the core material, followed by reabsorption of the melt into the core and re-solidification upon decreasing the heat load, being reminiscent of a ‘soldering nanorod’. The radius of the liquid nanodrop can reach a few tens of nanometres, containing a total volume of 10-20 up to 10-18 l of liquid Sn. In situ TEM confirms that the radius of the nanodrop can be controlled via the thermal load: it increases with increasing temperature and decreases with decreasing temperature. In addition, some phenomena related to structure modifications during extended electron-beam exposure are also described.
Comparing side chain packing in soluble proteins, protein-protein interfaces, and transmembrane proteins.

PubMed

Gaines, J C; Acebes, S; Virrueta, A; Butler, M; Regan, L; O'Hern, C S

2018-05-01

We compare side chain prediction and packing of core and non-core regions of soluble proteins, protein-protein interfaces, and transmembrane proteins. We first identified or created comparable databases of high-resolution crystal structures of these 3 protein classes. We show that the solvent-inaccessible cores of the 3 classes of proteins are equally densely packed. As a result, the side chains of core residues at protein-protein interfaces and in the membrane-exposed regions of transmembrane proteins can be predicted by the hard-sphere plus stereochemical constraint model with the same high prediction accuracies (>90%) as core residues in soluble proteins. We also find that for all 3 classes of proteins, as one moves away from the solvent-inaccessible core, the packing fraction decreases as the solvent accessibility increases. However, the side chain predictability remains high (80% within 30°) up to a relative solvent accessibility, rSASA≲0.3, for all 3 protein classes. Our results show that ≈40% of the interface regions in protein complexes are "core", that is, densely packed with side chain conformations that can be accurately predicted using the hard-sphere model. We propose packing fraction as a metric that can be used to distinguish real protein-protein interactions from designed, non-binding, decoys. Our results also show that cores of membrane proteins are the same as cores of soluble proteins. Thus, the computational methods we are developing for the analysis of the effect of hydrophobic core mutations in soluble proteins will be equally applicable to analyses of mutations in membrane proteins. © 2018 Wiley Periodicals, Inc.
Steamworlds: Atmospheric Structure and Critical Mass of Planets Accreting Icy Pebbles

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chambers, John, E-mail: jchambers@carnegiescience.edu

In the core accretion model, gas-giant planets first form a solid core, which then accretes gas from a protoplanetary disk when the core exceeds a critical mass. Here, we model the atmosphere of a core that grows by accreting ice-rich pebbles. The ice fraction of pebbles evaporates in warm regions of the atmosphere, saturating it with water vapor. Excess water precipitates to lower altitudes. Beneath an outer radiative region, the atmosphere is convective, following a moist adiabat in saturated regions due to water condensation and precipitation. Atmospheric mass, density, and temperature increase with core mass. For nominal model parameters, planetsmore » with core masses (ice + rock) between 0.08 and 0.16 Earth masses have surface temperatures between 273 and 647 K and form an ocean. In more massive planets, water exists as a supercritical convecting fluid mixed with gas from the disk. Typically, the core mass reaches a maximum (the critical mass) as a function of the total mass when the core is 2–5 Earth masses. The critical mass depends in a complicated way on pebble size, mass flux, and dust opacity due to the occasional appearance of multiple core-mass maxima. The core mass for an atmosphere of 50% hydrogen and helium may be a more robust indicator of the onset of gas accretion. This mass is typically 1–3 Earth masses for pebbles that are 50% ice by mass, increasing with opacity and pebble flux and decreasing with pebble ice/rock ratio.« less
Actin-binding and cell proliferation activities of angiomotin family members are regulated by Hippo pathway-mediated phosphorylation.

PubMed

Chan, Siew Wee; Lim, Chun Jye; Guo, Fusheng; Tan, Ivan; Leung, Thomas; Hong, Wanjin

2013-12-27

Whether the Hippo pathway has downstream targets other than YAP and TAZ is unknown. In this report, we have identified angiomotin (Amot) family members as novel substrates of Hippo core kinases. The N-terminal regions of Amot proteins contain a conserved HXRXXS consensus site for LATS1/2-mediated phosphorylation. Phospho-specific antibodies showed that Hippo core kinases could mediate phosphorylation of endogenous as well as exogenous Amot family members. Knockdown of LATS1 and LATS2 endogenously reduced the phosphorylation of Amots detected by the phospho-specific antibodies. Mutation of the serine to alanine within this HXRXXS site in Amot and AmotL2 established that this site was essential for Hippo core kinase-mediated phosphorylation. Wild-type and non-phosphorylated Amot (Amot-S175A) were targeted to actin filaments, whereas phospho-mimic Amot (Amot-S175D) failed to be localized with actin. Overexpression of LATS2 caused dissociation of Amot from actin but not Amot-S175A. Mapping of the actin-binding site of Amot showed that serine 175 of Amot was important for the actin-binding activity. Amot-S175A promoted, whereas Amot and Amot-S175D inhibited, cell proliferation. These results collectively suggest that the Hippo pathway negatively regulates the actin-binding activity of Amot family members through direct phosphorylation.
Analysis of magnetotelluric profile data from the Ruby Mountains metamorphic core complex and southern Carlin Trend region, Nevada

USGS Publications Warehouse

Wannamaker, Philip E.; Doerner, William M.; Stodt, John A.; Sodergen, Timothy L.; Rodriguez, Brian D.

2002-01-01

We have collected about 150 magnetotelluric (MT) soundings in northeastern Nevada in the region of the Ruby Mountains metamorphic core complex uplift and southern Carlin mineral trend, in an effort to illuminate controls on core complex evolution and deposition of world-class gold deposits. The region has experienced a broad range of tectonic events including several periods of compressional and extensional deformation, which have contributed to the total expression of electrical resistivity. Most of the soundings are in three east-west profiles across increasing degrees of core uplift to the north (Bald Mountain, Harrison Pass and Secret Pass latitudes). Two shorter lines cross a prominent east-west structure to the north of the northern profile. MT impedance tensor and vertical magnetic field rotations imply a N-NNE average regional geoelectric strike, similar to surface geologic trends. Model resistivity cross sections were derived using a 2-D inversion algorithm, which damps departures of model parameters from an a priori structure, emphasizing the transverse magnetic (TM) mode and vertical magnetic field data. Geological interpretation of the resistivity combines previous seismic, potential field and isotope models, structural and petrological models for regional compression and extension, and detailed structural/stratigraphic interpretations incorporating drilling for petroleum and mineral exploration. To first order, the resistivity structure is one of a moderately conductive, Phanerozoic sedimentary section fundamentally disrupted by intrusion and uplift of resistive crystalline rocks. Late Devonian and early Mississippian shales of the Pilot and Chainman Formations together form an important conductive marker sequence in the stratigraphy and show pronounced increases in conductance (conductivity-thickness product) from east to west. These increases in conductance are attributed to graphitization caused by Elko-Sevier era compressional shear deformation and possibly by intrusive heating. The resistive crystalline central massifs adjoin the host stratigraphy across crustal-scale, subvertical fault zones. These zones provide electric current pathways to the lower crust for heterogeneous, upper crustal induced current flow. Resistive core complex crust may be steeply bounded under the middle of the neighboring grabens and not deepen at a shallow angle to arbitrary distances to the west. The numerous crustal breaks imaged with MT may contribute to the low effective elastic thickness estimated regionally for the Great Basin and exemplify the mid-crustal, steeply dipping slip zones in which major earthquakes nucleate. An east-west oriented conductor in the crystalline upper crust spans the East Humboldt Range and northern Ruby Mountains. The conductor may be related to an inferred ArcheanProterozoic suture or nearby graphitic metasediments, with possible alteration by middle Tertiary magmatic activity. Lower crustal resistivity everywhere under the profiles is low and appears quasi one-dimensional. It is consistent with a low rock porosity (
A mathematical model of O2 transport in the rat outer medulla. II. Impact of outer medullary architecture.

PubMed

Chen, Jing; Edwards, Aurélie; Layton, Anita T

2009-08-01

we extended the region-based mathematical model of the urine-concentrating mechanism in the rat outer medulla (OM) developed by Layton and Layton (Am J Physiol Renal Physiol 289: F1346-F1366, 2005) to examine the impact of the complex structural organization of the OM on O(2) transport and distribution. In the present study, we investigated the sensitivity of predicted Po(2) profiles to several parameters that characterize the degree of OM regionalization, boundary conditions, structural dimensions, transmural transport properties, and relative positions and distributions of tubules and vessels. Our results suggest that the fraction of O(2) supplied to descending vasa recta (DVR) that reaches the inner medulla, i.e., a measure of the axial Po(2) gradient in the OM, is insensitive to parameter variations as a result of the sequestration of long DVR in the vascular bundles. In contrast, O(2) distribution among the regions surrounding the vascular core strongly depends on the radial positions of medullary thick ascending limbs (mTALs) relative to the vascular core, the degree of regionalization, and the distribution of short DVR along the corticomedullary axis. Moreover, if it is assumed that the mTAL active Na(+) transport rate decreases when mTAL Po(2) falls below a critical level, O(2) availability to mTALs has a significant impact on the concentrating capability of the model OM. The model also predicts that when the OM undergoes hypertrophy, its concentrating capability increases significantly only when anaerobic metabolism supports a substantial fraction of the mTAL active Na(+) transport and is otherwise critically reduced by low interstitial and mTAL luminal Po(2) in a hypertrophied OM.
Comparison of Two Coronal Magnetic Field Models to Reconstruct a Sigmoidal Solar Active Region with Coronal Loops

NASA Astrophysics Data System (ADS)

Duan, Aiying; Jiang, Chaowei; Hu, Qiang; Zhang, Huai; Gary, G. Allen; Wu, S. T.; Cao, Jinbin

2017-06-01

Magnetic field extrapolation is an important tool to study the three-dimensional (3D) solar coronal magnetic field, which is difficult to directly measure. Various analytic models and numerical codes exist, but their results often drastically differ. Thus, a critical comparison of the modeled magnetic field lines with the observed coronal loops is strongly required to establish the credibility of the model. Here we compare two different non-potential extrapolation codes, a nonlinear force-free field code (CESE-MHD-NLFFF) and a non-force-free field (NFFF) code, in modeling a solar active region (AR) that has a sigmoidal configuration just before a major flare erupted from the region. A 2D coronal-loop tracing and fitting method is employed to study the 3D misalignment angles between the extrapolated magnetic field lines and the EUV loops as imaged by SDO/AIA. It is found that the CESE-MHD-NLFFF code with preprocessed magnetogram performs the best, outputting a field that matches the coronal loops in the AR core imaged in AIA 94 Å with a misalignment angle of ˜10°. This suggests that the CESE-MHD-NLFFF code, even without using the information of the coronal loops in constraining the magnetic field, performs as good as some coronal-loop forward-fitting models. For the loops as imaged by AIA 171 Å in the outskirts of the AR, all the codes including the potential field give comparable results of the mean misalignment angle (˜30°). Thus, further improvement of the codes is needed for a better reconstruction of the long loops enveloping the core region.
Dissecting transcription-coupled and global genomic repair in the chromatin of yeast GAL1-10 genes.

PubMed

Li, Shisheng; Smerdon, Michael J

2004-04-02

Transcription-coupled repair (TCR) and global genomic repair (GGR) of UV-induced cyclobutane pyrimidine dimers were investigated in the yeast GAL1-10 genes. Both Rpb9- and Rad26-mediated TCR are confined to the transcribed strands, initiating at upstream sites approximately 100 nucleotides from the upstream activating sequence shared by the two genes. However, TCR initiation sites do not correlate with either transcription start sites or TATA boxes. Rad16-mediated GGR tightly correlates with nucleosome positioning when the genes are repressed and are slow in the nucleosome core and fast in linker DNA. Induction of transcription enhanced GGR in nucleosome core DNA, especially in the nucleosomes around and upstream of the transcription start sites. Furthermore, when the genes were induced, GGR was slower in the transcribed regions than in the upstream regions. Finally, simultaneous deletion of RAD16, RAD26, and RPB9 resulted in no detectable repair in all sites along the region analyzed. Our results suggest that (a). TCR may be initiated by a transcription activator, presumably through the loading of RNA polymerase II, rather than by transcription initiation or elongation per se; (b). TCR and nucleosome disruption-enhanced GGR are the major causes of rapid repair in regions around and upstream of transcription start sites; (c). transcription machinery may hinder access of NER factors to a DNA lesion in the absence of a transcription-repair coupling factor; and (d). other than GGR mediated by Rad16 and TCR mediated by Rad26 and Rpb9, no other nucleotide excision repair pathway exists in these RNA polymerase II-transcribed genes.
Comparison of Two Coronal Magnetic Field Models to Reconstruct a Sigmoidal Solar Active Region with Coronal Loops

DOE Office of Scientific and Technical Information (OSTI.GOV)

Duan, Aiying; Zhang, Huai; Jiang, Chaowei

Magnetic field extrapolation is an important tool to study the three-dimensional (3D) solar coronal magnetic field, which is difficult to directly measure. Various analytic models and numerical codes exist, but their results often drastically differ. Thus, a critical comparison of the modeled magnetic field lines with the observed coronal loops is strongly required to establish the credibility of the model. Here we compare two different non-potential extrapolation codes, a nonlinear force-free field code (CESE–MHD–NLFFF) and a non-force-free field (NFFF) code, in modeling a solar active region (AR) that has a sigmoidal configuration just before a major flare erupted from themore » region. A 2D coronal-loop tracing and fitting method is employed to study the 3D misalignment angles between the extrapolated magnetic field lines and the EUV loops as imaged by SDO /AIA. It is found that the CESE–MHD–NLFFF code with preprocessed magnetogram performs the best, outputting a field that matches the coronal loops in the AR core imaged in AIA 94 Å with a misalignment angle of ∼10°. This suggests that the CESE–MHD–NLFFF code, even without using the information of the coronal loops in constraining the magnetic field, performs as good as some coronal-loop forward-fitting models. For the loops as imaged by AIA 171 Å in the outskirts of the AR, all the codes including the potential field give comparable results of the mean misalignment angle (∼30°). Thus, further improvement of the codes is needed for a better reconstruction of the long loops enveloping the core region.« less
On M31's Double Nucleus

NASA Technical Reports Server (NTRS)

Miller, R. H.; Smith, B. F.; Cuzzi, Jeffrey (Technical Monitor)

1995-01-01

The recent HST discovery of a double nucleus in M31 brings into prominence the question how long, a second core can survive within the nuclear regions of a galaxy. Physical conditions in the nuclear regions of a typical galaxy help a second core survive, so it can orbit for a long time. possibly for thousands of orbits. Given the nearly uniform mass density in a core, tidal forces within a core radius are compressive in all directions and help the core survive the buffeting it takes as it orbits near the center of the galaxy. We use numerical experiments to illustrate these physical principles. Our method allows the full power of the experiments to be concentrated on the nuclear regions. Spatial resolution of about 0.2 pc comfortably resolves detail within the 1.4 parsec core radius of the second, but brighter core (P1) in M31. We use these physical principles to discuss M31's double nucleus, but they apply to other galaxies as well. and in other astronomical situations such as dumbbell galaxies. galaxies orbiting near the center of a galaxy cluster, and subclustering in galaxy clusters. The experiments also illustrate that galaxy encounters and merging are quite sensitive to external tidal forces, such as those produced by the gravitational potential in a group or cluster of galaxies.
The neural basis of the bystander effect--the influence of group size on neural activity when witnessing an emergency.

PubMed

Hortensius, Ruud; de Gelder, Beatrice

2014-06-01

Naturalistic observation and experimental studies in humans and other primates show that observing an individual in need automatically triggers helping behavior. The aim of the present study is to clarify the neurofunctional basis of social influences on individual helping behavior. We investigate whether when participants witness an emergency, while performing an unrelated color-naming task in an fMRI scanner, the number of bystanders present at the emergency influences neural activity in regions related to action preparation. The results show a decrease in activity with the increase in group size in the left pre- and postcentral gyri and left medial frontal gyrus. In contrast, regions related to visual perception and attention show an increase in activity. These results demonstrate the neural mechanisms of social influence on automatic action preparation that is at the core of helping behavior when witnessing an emergency. Copyright © 2014 Elsevier Inc. All rights reserved.
DYNAMIC NEUROMUSCULAR STABILIZATION & SPORTS REHABILITATION

PubMed Central

Kobesova, Alena; Kolar, Pavel

2013-01-01

Dynamic neuromuscular (core) stability is necessary for optimal athletic performance and is not achieved purely by adequate strength of abdominals, spinal extensors, gluteals or any other musculature; rather, core stabilization is accomplished through precise coordination of these muscles and intra‐abdominal pressure regulation by the central nervous system. Understanding developmental kinesiology provides a framework to appreciate the regional interdependence and the inter‐linking of the skeleton, joints, musculature during movement and the importance of training both the dynamic and stabilizing function of muscles in the kinetic chain. The Dynamic Neuromuscular Stabilization (DNS) approach provides functional tools to assess and activate the intrinsic spinal stabilizers in order to optimize the movement system for both pre‐habilitation and rehabilitation of athletic injuries and performance. Level of Evidence: 5 PMID:23439921
Star formation activity in the southern Galactic H II region G351.63-1.25

NASA Astrophysics Data System (ADS)

Vig, S.; Ghosh, S. K.; Ojha, D. K.; Verma, R. P.; Tamura, M.

2014-06-01

The southern Galactic high-mass star-forming region, G351.63-1.25, is an H II region-molecular cloud complex with a luminosity of ˜2.0 × 105 L⊙, located at a distance of 2.4 kpc from the Sun. In this paper, we focus on the investigation of the associated H II region, embedded cluster and the interstellar medium in the vicinity of G351.63-1.25. We address the identification of exciting source(s) as well as the census of the stellar populations, in an attempt to unfold star formation activity in this region. The ionized gas distribution has been mapped using the Giant Metrewave Radio Telescope, India, at three frequencies: 1280, 610 and 325 MHz. The H II region shows an elongated morphology and the 1280 MHz map comprises six resolved high-density regions encompassed by diffuse emission spanning 1.4 × 1.0 pc2. Based on the measurements of flux densities at multiple radio frequencies, the brightest ultracompact core has electron temperature Te˜7647 {±} 153 K and emission measure, EM˜2.0 {±} 0.8×107 cm-6 pc. The zero-age main-sequence spectral type of the brightest radio core is O7.5. We have carried out near-infrared observations in the JHKs bands using the SIRIUS camera on the 1.4 m Infrared Survey Facility telescope. The near-infrared images reveal the presence of a cluster embedded in nebulous fan-shaped emission. The log-normal slope of the K-band luminosity function of the embedded cluster is found to be ˜0.27 ± 0.03, and the fraction of the near-infrared excess stars is estimated to be 43 per cent. These indicate that the age of the cluster is consistent with ˜1 Myr. Other available data of this region show that the warm (mid-infrared) and cold (millimetre) dust emission peak at different locations indicating progressive stages of star formation process. The champagne flow model from a flat, thin molecular cloud is used to explain the morphology of radio emission with respect to the millimetre cloud and infrared brightness.
Seismological evidence for a localized mushy zone at the Earth's inner core boundary.

PubMed

Tian, Dongdong; Wen, Lianxing

2017-08-01

Although existence of a mushy zone in the Earth's inner core has been hypothesized several decades ago, no seismic evidence has ever been reported. Based on waveform modeling of seismic compressional waves that are reflected off the Earth's inner core boundary, here we present seismic evidence for a localized 4-8 km thick zone across the inner core boundary beneath southwest Okhotsk Sea with seismic properties intermediate between those of the inner and outer core and of a mushy zone. Such a localized mushy zone is found to be surrounded by a sharp inner core boundary nearby. These seismic results suggest that, in the current thermo-compositional state of the Earth's core, the outer core composition is close to eutectic in most regions resulting in a sharp inner core boundary, but deviation from the eutectic composition exists in some localized regions resulting in a mushy zone with a thickness of 4-8 km.The existence of a mushy zone in the Earth's inner core has been suggested, but has remained unproven. Here, the authors have discovered a 4-8 km thick mushy zone at the inner core boundary beneath the Okhotsk Sea, indicating that there may be more localized mushy zones at the inner core boundary.
Noncore RAG1 regions promote Vβ rearrangements and αβ T cell development by overcoming inherent inefficiency of Vβ recombination signal sequences.

PubMed

Horowitz, Julie E; Bassing, Craig H

2014-02-15

The RAG proteins are comprised of core endonuclease domains and noncore regions that modulate endonuclease activity. Mutation or deletion of noncore RAG regions in humans causes immunodeficiency and altered TCR repertoire, and mice expressing core but not full-length Rag1 (Rag1(C/C)) or Rag2 (Rag2(C/C)) exhibit lymphopenia, reflecting impaired V(D)J recombination and lymphocyte development. Rag1(C/C) mice display reduced D-to-J and V-to-DJ rearrangements of TCRβ and IgH loci, whereas Rag2(C/C) mice show decreased V-to-DJ rearrangements and altered Vβ/VH repertoire. Because Vβs/VHs only recombine to DJ complexes, the Rag1(C/C) phenotype could reflect roles for noncore RAG1 regions in promoting recombination during only the D-to-J step or during both steps. In this study, we demonstrate that a preassembled TCRβ gene, but not a preassembled DβJβ complex or the prosurvival BCL2 protein, completely rescues αβ T cell development in Rag1(C/C) mice. We find that Rag1(C/C) mice exhibit altered Vβ utilization in Vβ-to-DJβ rearrangements, increased usage of 3'Jα gene segments in Vα-to-Jα rearrangements, and abnormal changes in Vβ repertoire during αβ TCR selection. Inefficient Vβ/VH recombination signal sequences (RSSs) have been hypothesized to cause impaired V-to-DJ recombination on the background of a defective recombinase as in core-Rag mice. We show that replacement of the Vβ14 RSS with a more efficient RSS increases Vβ14 recombination and rescues αβ T cell development in Rag1(C/C) mice. Our data indicate that noncore RAG1 regions establish a diverse TCR repertoire by overcoming Vβ RSS inefficiency to promote Vβ recombination and αβ T cell development, and by modulating TCRβ and TCRα gene segment utilization.
Chikungunya virus nsP4 RNA-dependent RNA polymerase core domain displays detergent-sensitive primer extension and terminal adenylyltransferase activities.

PubMed

Chen, Ming Wei; Tan, Yaw Bia; Zheng, Jie; Zhao, Yongqian; Lim, Bee Ting; Cornvik, Tobias; Lescar, Julien; Ng, Lisa Fong Poh; Luo, Dahai

2017-07-01

Chikungunya virus (CHIKV) is an important arboviral infectious agent in tropical and subtropical regions, often causing persistent and debilitating disease. The viral enzyme non-structural protein 4 (nsP4), as RNA-dependent RNA polymerase (RdRP), catalyzes the formation of negative-sense, genomic and subgenomic viral RNAs. Here we report a truncated nsP4 construct that is soluble, stable and purified recombinantly from Escherichia coli. Sequence analyses and homology modelling indicate that all necessary RdRP elements are included. Hydrogen/deuterium exchange with mass spectrometry was used to analyze solvent accessibility and flexibility of subdomains. Fluorophore-conjugated RNA ligands were designed and screened by using fluorescence anisotropy to select a suitable substrate for RdRP assays. Assay trials revealed that nsP4 core domain is conditionally active upon choice of detergent species, and carries out both primed extension and terminal adenylyltransferase activities. The polymerization assay can be further developed to screen for antiviral compounds in vitro. Copyright © 2017 Elsevier B.V. All rights reserved.
Colour or shape: examination of neural processes underlying mental flexibility in posttraumatic stress disorder.

PubMed

Pang, E W; Sedge, P; Grodecki, R; Robertson, A; MacDonald, M J; Jetly, R; Shek, P N; Taylor, M J

2014-08-05

Posttraumatic stress disorder (PTSD) is a mental disorder that stems from exposure to one or more traumatic events. While PTSD is thought to result from a dysregulation of emotional neurocircuitry, neurocognitive difficulties are frequently reported. Mental flexibility is a core executive function that involves the ability to shift and adapt to new information. It is essential for appropriate social-cognitive behaviours. Magnetoencephalography (MEG), a neuroimaging modality with high spatial and temporal resolution, has been used to track the progression of brain activation during tasks of mental flexibility called set-shifting. We hypothesized that the sensitivity of MEG would be able to capture the abnormal neurocircuitry implicated in PTSD and this would negatively impact brain regions involved in set-shifting. Twenty-two soldiers with PTSD and 24 matched control soldiers completed a colour-shape set-shifting task. MEG data were recorded and source localized to identify significant brain regions involved in the task. Activation latencies were obtained by analysing the time course of activation in each region. The control group showed a sequence of activity that involved dorsolateral frontal cortex, insula and posterior parietal cortices. The soldiers with PTSD showed these activations but they were interrupted by activations in paralimbic regions. This is consistent with models of PTSD that suggest dysfunctional neurocircuitry is driven by hyper-reactive limbic areas that are not appropriately modulated by prefrontal cortical control regions. This is the first study identifying the timing and location of atypical neural responses in PTSD with set-shifting and supports the model that hyperactive limbic structures negatively impact cognitive function.
Microbial diversity in methane hydrate-bearing deep marine sediments core preserved in the original pressure.

NASA Astrophysics Data System (ADS)

Takahashi, Y.; Hata, T.; Nishida, H.

2017-12-01

In normal coring of deep marine sediments, the sampled cores are exposed to the pressure of the atmosphere, which results in dissociation of gas-hydrates and might change microbial diversity. In this study, we analyzed microbial composition in methane hydrate-bearing sediment core sampled and preserved by Hybrid-PCS (Pressure Coring System). We sliced core into three layers; (i) outside layer, which were most affected by drilling fluids, (ii) middle layer, and (iii) inner layer, which were expected to be most preserved as the original state. From each layer, we directly extracted DNA, and amplified V3-V4 region of 16S rRNA gene. We determined at least 5000 of nucleotide sequences of the partial 16S rDNA from each layer by Miseq (Illumina). In the all layers, facultative anaerobes, which can grow with or without oxygen because they can metabolize energy aerobically or anaerobically, were detected as majority. However, the genera which are often detected anaerobic environment is abundant in the inner layer compared to the outside layer, indicating that condition of drilling and preservation affect the microbial composition in the deep marine sediment core. This study was conducted as a part of the activity of the Research Consortium for Methane Hydrate Resources in Japan [MH21 consortium], and supported by JOGMEC (Japan Oil, Gas and Metals National Corporation). The sample was provided by AIST (National Institute of Advanced Industrial Science and Technology).
ACTIVE REGION MOSS: DOPPLER SHIFTS FROM HINODE/EXTREME-ULTRAVIOLET IMAGING SPECTROMETER OBSERVATIONS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tripathi, Durgesh; Mason, Helen E.; Klimchuk, James A.

2012-07-01

Studying the Doppler shifts and the temperature dependence of Doppler shifts in moss regions can help us understand the heating processes in the core of the active regions. In this paper, we have used an active region observation recorded by the Extreme-ultraviolet Imaging Spectrometer (EIS) on board Hinode on 2007 December 12 to measure the Doppler shifts in the moss regions. We have distinguished the moss regions from the rest of the active region by defining a low-density cutoff as derived by Tripathi et al. in 2010. We have carried out a very careful analysis of the EIS wavelength calibrationmore » based on the method described by Young et al. in 2012. For spectral lines having maximum sensitivity between log T = 5.85 and log T = 6.25 K, we find that the velocity distribution peaks at around 0 km s{sup -1} with an estimated error of 4-5 km s{sup -1}. The width of the distribution decreases with temperature. The mean of the distribution shows a blueshift which increases with increasing temperature and the distribution also shows asymmetries toward blueshift. Comparing these results with observables predicted from different coronal heating models, we find that these results are consistent with both steady and impulsive heating scenarios. However, the fact that there are a significant number of pixels showing velocity amplitudes that exceed the uncertainty of 5 km s{sup -1} is suggestive of impulsive heating. Clearly, further observational constraints are needed to distinguish between these two heating scenarios.« less
A new method for geochemical characterization of atmospheric mineral dust from polar ice cores: preliminary results from Talos Dome ice core (East Antarctica, Pacific-Ross Sea sector)

NASA Astrophysics Data System (ADS)

Baccolo, Giovanni; Delmonte, Barbara; Clemenza, Massimiliano; Previtali, Ezio; Maggi, Valter

2015-04-01

Assessing the elemental composition of atmospheric dust entrapped in polar ice cores is important for the identification of the potential dust sources and thus for the reconstruction of past atmospheric circulation, at local, regional and global scale. Accurate determination of major and trace elements in the insoluble fraction of dust extracted from ice cores is also useful to better understand some geochemical and biogeochemical mechanisms which are linked with the climate system. The extremely reduced concentration of dust in polar ice (typical Antarctic concentrations during interglacials are in the range of 10 ppb), the limited availability of such samples and the high risk of contamination make these analyses a challenge. A new method based on low background Instrumental Neutron Activation Analysis (INAA) was specifically developed for this kind of samples. The method allows the determination of the concentration of up to 35 elements in extremely reduced dust samples (20-30 μg). These elements span from major to trace and ultra-trace elements. Preliminary results from TALDICE (TALos Dome Ice CorE, East Antarctica, Pacific-Ross Sea Sector) ice core are presented along with results from potential source areas in Victoria Land. A set of 5 samples from Talos Dome, corresponding to the last termination, MIS3, MIS4 and MIS6 were prepared and analyzed by INAA.

Attention for speaking: domain-general control from the anterior cingulate cortex in spoken word production

PubMed Central

Piai, Vitória; Roelofs, Ardi; Acheson, Daniel J.; Takashima, Atsuko

2013-01-01

Accumulating evidence suggests that some degree of attentional control is required to regulate and monitor processes underlying speaking. Although progress has been made in delineating the neural substrates of the core language processes involved in speaking, substrates associated with regulatory and monitoring processes have remained relatively underspecified. We report the results of an fMRI study examining the neural substrates related to performance in three attention-demanding tasks varying in the amount of linguistic processing: vocal picture naming while ignoring distractors (picture-word interference, PWI); vocal color naming while ignoring distractors (Stroop); and manual object discrimination while ignoring spatial position (Simon task). All three tasks had congruent and incongruent stimuli, while PWI and Stroop also had neutral stimuli. Analyses focusing on common activation across tasks identified a portion of the dorsal anterior cingulate cortex (ACC) that was active in incongruent trials for all three tasks, suggesting that this region subserves a domain-general attentional control function. In the language tasks, this area showed increased activity for incongruent relative to congruent stimuli, consistent with the involvement of domain-general mechanisms of attentional control in word production. The two language tasks also showed activity in anterior-superior temporal gyrus (STG). Activity increased for neutral PWI stimuli (picture and word did not share the same semantic category) relative to incongruent (categorically related) and congruent stimuli. This finding is consistent with the involvement of language-specific areas in word production, possibly related to retrieval of lexical-semantic information from memory. The current results thus suggest that in addition to engaging language-specific areas for core linguistic processes, speaking also engages the ACC, a region that is likely implementing domain-general attentional control. PMID:24368899
32 CFR 169a.9 - Reviews: Existing in-house commercial activities.

Code of Federal Regulations, 2012 CFR

2012-07-01

... skill levels. (ii) Core logistics activities. The core logistics capability reported to Congress, March... either government or contractor personnel, whichever is more cost effective. Core logistics activities... submitted to the ASD (P&L). DoD Components may propose to the ASD (P&L) additional core logistics capability...
Elemental carbon and polycyclic aromatic compounds in a 150-year sediment core from Lake Qinghai, Tibetan Plateau, China: influence of regional and local sources and transport pathways.

PubMed

Han, Y M; Wei, C; Bandowe, B A M; Wilcke, W; Cao, J J; Xu, B Q; Gao, S P; Tie, X X; Li, G H; Jin, Z D; An, Z S

2015-04-07

Elemental carbon (EC) and polycyclic aromatic compounds (PACs) are potential proxies for the reconstruction of change in human activities and the origin of air masses in historic times. In this study, the historic deposition of char and soot (the two subtypes of EC) and PACs in a 150-year sediment core from different topographic subbasins of Lake Qinghai on the Qinghai Tibetan Plateau (QTP) were reconstructed. The objective was to explore how the variations in the concentrations of EC and PACs, in the ratios of char to soot and of oxygenated polycyclic aromatic hydrocarbons (OPAHs) to parent PAHs, and in the composition of the PAC mixtures reflect historical changes in climate and human activity and the origin of air masses arriving at the QTP. The deposition fluxes of soot in the different subbasins were similar, averaging 0.18 (range of 0.15-0.25) and 0.16 (0.13-0.23) g m(-2) year(-1), respectively, but they varied for char (averaging 0.11 and 0.22 g m(-2) year(-1), respectively), suggesting ubiquitous atmospheric deposition of soot and local river inputs of char. The different vertical distributions of the char/soot ratios in the different subbasins can be interpreted in terms of the different transport mechanisms of char and soot. An abrupt increase in soot concentrations since 1980 coincides with results from the QTP ice cores that were interpreted to be indicative of soot transport from South Asia. Similar concentration patterns of PAHs with soot and 9,10-anthraquinone/anthracene (9,10-AQ/ANT) ratios all >2.0 suggest regional PAC sources. Increasing PAH/soot ratios and decreasing 9,10-AQ/ANT ratios since the beginning of the 1970s indicate increasing local emissions. The historical trends of these diagnostic ratios indicate an increase in the fossil-fuel contribution since the beginning of the 1970s. The increase of perylene concentrations with increasing core depth and the ratio of perylene to its penta-aromatic isomers indicate that perylene originates mainly from in situ biogenic diagenesis. We demonstrate that the concentrations of EC, char, soot, and PACs in sediments can be used to reconstruct local, regional, and remote sources and transport pathways of pollutants to the QTP.
A Numerical Study on the Effect of Facesheet-Core Disbonds on the Buckling Load of Curved Honeycomb Sandwich Panels

NASA Technical Reports Server (NTRS)

Pineda, Evan J.; Myers, David E.; Bednarcyk, Brett A.; Krivanek, Thomas M.

2015-01-01

A numerical study on the effect of facesheet-core disbonds on the post-buckling response of curved honeycomb sandwich panels is presented herein. This work was conducted as part of the development of a damage tolerance approach for the next-generation Space Launch System heavy lift vehicle payload fairing. As such, the study utilized full-scale fairing barrel segments as the structure of interest. The panels were composed of carbon fiber reinforced polymer facesheets and aluminum honeycomb core. The panels were analyzed numerically using the finite element method. Facesheet and core nodes in a predetermined circular region were detached to simulate a disbond induced via low-speed impact between the outer mold line facesheet and honeycomb core. Surface-to-surface contact in the disbonded region was invoked to prevent interpenetration of the facesheet and core elements. The diameter of this disbonded region was varied and the effect of the size of the disbond on the post-buckling response was observed. A significant change in the slope of the edge load-deflection response was used to determine the onset of global buckling and corresponding buckling load.
The impact of teachers’ modifications of an evidenced-based HIV prevention intervention on program outcomes

PubMed Central

Wang, Bo; Stanton, Bonita; Lunn, Sonja; Rolle, Glenda; Poitier, Maxwell; Adderley, Richard; Li, Xiaoming; Koci, Veronica; Deveaux, Lynette

2015-01-01

The degree to which evidence-based program outcomes are affected by modifications is a significant concern in the implementation of interventions. The ongoing national implementation of an evidence-based HIV prevention program targeting grade six students in The Bahamas [Focus on Youth in The Caribbean (FOYC)] offers an opportunity to explore factors associated with teachers’ modification of FOYC lessons and to examine the impact of types and degrees of modifications on student outcomes. Data were collected in 2012 from 155 teachers and 3646 students in 77 government elementary schools. Results indicate that teachers taught 16 of 30 core activities, 24.5 of 46 total activities and 4.7 of 8 sessions. Over one-half of the teachers made modifications to FOYC core activities; one-fourth of the teachers modified 25% or more core activities that they taught (heavily modified FOYC). Omitting core activities was the most common content modification, followed by lengthening FOYC lessons with reading, writing assignments or role-play games, shortening core activities or adding educational videos. Mixed-effects modeling revealed that omitting core activities had negative impacts on all four student outcomes. Shortening core activities and adding videos into lessons had negative impacts on HIV/AIDS knowledge and/or intention to use condom protection. Heavy modifications (>1/4 core activities) were associated with diminished program effectiveness. Heavy modifications and omitting or shortening core activities were negatively related to teachers’ level of implementation. We conclude that poorer student outcomes were associated with heavy modifications. PMID:26297497
The Impact of Teachers' Modifications of an Evidenced-Based HIV Prevention Intervention on Program Outcomes.

PubMed

Wang, Bo; Stanton, Bonita; Lunn, Sonja; Rolle, Glenda; Poitier, Maxwell; Adderley, Richard; Li, Xiaoming; Koci, Veronica; Deveaux, Lynette

2016-01-01

The degree to which evidence-based program outcomes are affected by modifications is a significant concern in the implementation of interventions. The ongoing national implementation of an evidence-based HIV prevention program targeting grade 6 students in The Bahamas [Focus on Youth in The Caribbean (FOYC)] offers an opportunity to explore factors associated with teachers' modification of FOYC lessons and to examine the impact of types and degrees of modifications on student outcomes. Data were collected in 2012 from 155 teachers and 3646 students in 77 government elementary schools. Results indicate that teachers taught 16 of 30 core activities, 24.5 of 46 total activities and 4.7 of 8 sessions. Over one-half of the teachers made modifications to FOYC core activities; one-fourth of the teachers modified 25 % or more core activities that they taught (heavily modified FOYC). Omitting core activities was the most common content modification, followed by lengthening FOYC lessons with reading, writing assignments or role-play games, and shortening core activities or adding educational videos. Mixed-effects modeling revealed that omitting core activities had negative impacts on all four student outcomes. Shortening core activities and adding videos into lessons had negative impacts on HIV/AIDS knowledge and/or intention to use condom protection. Heavy modifications (>1/4 core activities) were associated with diminished program effectiveness. Heavy modifications and omitting or shortening core activities were negatively related to teachers' level of implementation. We conclude that poorer student outcomes were associated with heavy modifications.
Inner Core Imaging Using P'P'

NASA Astrophysics Data System (ADS)

Day, E. A.; Ward, J. A.; Bastow, I. D.; Irving, J. C. E.

2016-12-01

The Earth's inner core is a surprisingly complex region of our planet. Simple models of inner core solidification and evolution would lead us to expect a layered structure, which has "frozen in" in information about the state of the core at the time of solidification. However, seismic observations of Earth's inner core are not dominated by a radial "tree-ring" like pattern, but instead have revealed a hemispherical dichotomy in addition to depth dependent variations. There is a degree-one structure in isotropic and anisotropic velocities and in attenuation between the so-called eastern and western hemispheres of the inner core, with different depth distributions proposed for these varying phenomena. A range of mechanisms have been proposed to explain the hemispherical differences. These include models that require differences between the two hemispheres at the time of formation, post-solidification texturing, convection in the inner core, or hybrid mechanisms. Regional observations of the inner core suggest that a simple division between East and West may not be able to fully capture the structure present in the inner core. More detailed seismic observations will help us to understand the puzzle of the inner core's evolution. In this study we focus on updating observations of the seismic phase P'P', an inner core sensitive body wave with a more complex path than those typically used to study the inner core. By making new measurements of P'P' we illuminate new regions of the core with a high frequency phase that is sensitive to small scale structures. We examine the differential travel times of the different branches of P'P' (PKIKPPKIKP and PKPPKP), comparing the arrival time of inner core turning branch, P'P'df, with the arrival times of branches that turn in the outer core. P'P' is a relatively small amplitude phase, so we use both linear and non-linear stacking methods to make observations of the P'P' signals. These measurements are sensitive to the broad scale hemispherical pattern of anisotropy in the inner core as well as smaller scale variations.
Standardised assessment of functioning in ADHD: consensus on the ICF Core Sets for ADHD.

PubMed

Bölte, Sven; Mahdi, Soheil; Coghill, David; Gau, Susan Shur-Fen; Granlund, Mats; Holtmann, Martin; Karande, Sunil; Levy, Florence; Rohde, Luis A; Segerer, Wolfgang; de Vries, Petrus J; Selb, Melissa

2018-02-12

Attention-deficit/hyperactivity disorder (ADHD) is associated with significant impairments in social, educational, and occupational functioning, as well as specific strengths. Currently, there is no internationally accepted standard to assess the functioning of individuals with ADHD. WHO's International Classification of Functioning, Disability and Health-child and youth version (ICF) can serve as a conceptual basis for such a standard. The objective of this study is to develop a comprehensive, a common brief, and three age-appropriate brief ICF Core Sets for ADHD. Using a standardised methodology, four international preparatory studies generated 132 second-level ICF candidate categories that served as the basis for developing ADHD Core Sets. Using these categories and following an iterative consensus process, 20 ADHD experts from nine professional disciplines and representing all six WHO regions selected the most relevant categories to constitute the ADHD Core Sets. The consensus process resulted in 72 second-level ICF categories forming the comprehensive ICF Core Set-these represented 8 body functions, 35 activities and participation, and 29 environmental categories. A Common Brief Core Set that included 38 categories was also defined. Age-specific brief Core Sets included a 47 category preschool version for 0-5 years old, a 55 category school-age version for 6-16 years old, and a 52 category version for older adolescents and adults 17 years old and above. The ICF Core Sets for ADHD mark a milestone toward an internationally standardised functional assessment of ADHD across the lifespan, and across educational, administrative, clinical, and research settings.
Observational constraints on neutron star crust-core coupling during glitches

NASA Astrophysics Data System (ADS)

Newton, W. G.; Berger, S.; Haskell, B.

2015-12-01

We demonstrate that observations of glitches in the Vela pulsar can be used to investigate the strength of the crust-core coupling in a neutron star and provide a powerful probe of the internal structure of neutron stars. We assume that glitch recovery is dominated by the torque exerted by the mutual friction-mediated recoupling of superfluid components of the core that were decoupled from the crust during the glitch. Then we use the observations of the recoveries from two recent glitches in the Vela pulsar to infer the fraction of the core that is coupled to the crust during the glitch. We then analyse whether crustal neutrons alone are sufficient to drive glitches in the Vela pulsar, taking into account crustal entrainment. We use two sets of neutron star equations of state (EOSs) which span crust and core consistently and cover a conservative range of the slope of the symmetry energy at saturation density 30 < L < 120 MeV. The two sets differ in the stiffness of the high density EOS. We find that for medium to stiff EOSs, observations imply >70 per cent of the moment of inertia of the core is coupled to the crust during the glitch, though for softer EOSs L ≈ 30 MeV as little as 5 per cent could be coupled. We find that only by extending the region where superfluid vortices are strongly pinned into the core by densities at least 0.016 fm-3 above the crust-core transition density does any EOS reproduce the observed glitch activity.
An Extremely Rich Group Of Starbursts And Agns At A Z=3.1 Proto-Cluster Core

NASA Astrophysics Data System (ADS)

Umehata, Hideki

2017-06-01

The environment where galaxies inhabit is expected to play a critical role in shaping their evolution. Galaxies and nuclei in the dense environment at high redshift (i.e., proto-clusters) provide a good laboratory to investigate the accelerated, most extreme evolution of galaxies at a given epoch. Using ALMA band 3 and band 6, we mapped a 2'x3' region within the node at the junction of the 50 Mpc-scale filamentary three-dimensional structure traced by Lyman-alpha emitters (LAEs) in this field. We obtained 18 robustly detected 1.1mm sources (here after submillimeter galaxies, SMGs) with a signal-to-noise ratio (SNR) >5. We also detected CO(3-2) line from 8 SMGs, which in general shows relatively extended structure. Totally 12 ALMA SMGs have spectroscopic redshifts of z=3.09 and six of them host a X-ray luminous active galactic nuclei (AGN). We also find that multiple z=3.09 ALMA SMGs contribute to two AzTEC sources, supporting that interaction may be responsible for a significant fraction of multiplicity in single-dish sources. Our results suggest that the vigorous star formation activity and the growth of super massive black holes (SMBHs) occurred simultaneously in the densest regions at z 3, which is likely to correspond to the most active historical phase of the massive galaxy population found in the core of the clusters in the present universe.
Segregating the core computational faculty of human language from working memory.

PubMed

Makuuchi, Michiru; Bahlmann, Jörg; Anwander, Alfred; Friederici, Angela D

2009-05-19

In contrast to simple structures in animal vocal behavior, hierarchical structures such as center-embedded sentences manifest the core computational faculty of human language. Previous artificial grammar learning studies found that the left pars opercularis (LPO) subserves the processing of hierarchical structures. However, it is not clear whether this area is activated by the structural complexity per se or by the increased memory load entailed in processing hierarchical structures. To dissociate the effect of structural complexity from the effect of memory cost, we conducted a functional magnetic resonance imaging study of German sentence processing with a 2-way factorial design tapping structural complexity (with/without hierarchical structure, i.e., center-embedding of clauses) and working memory load (long/short distance between syntactically dependent elements; i.e., subject nouns and their respective verbs). Functional imaging data revealed that the processes for structure and memory operate separately but co-operatively in the left inferior frontal gyrus; activities in the LPO increased as a function of structural complexity, whereas activities in the left inferior frontal sulcus (LIFS) were modulated by the distance over which the syntactic information had to be transferred. Diffusion tensor imaging showed that these 2 regions were interconnected through white matter fibers. Moreover, functional coupling between the 2 regions was found to increase during the processing of complex, hierarchically structured sentences. These results suggest a neuroanatomical segregation of syntax-related aspects represented in the LPO from memory-related aspects reflected in the LIFS, which are, however, highly interconnected functionally and anatomically.
Regional water coefficients for U.S. industrial sectors

DOE PAGES

Boero, Riccardo; Pasqualini, Donatella

2017-09-14

Designing policies for water systems management requires the capability to assess the economic impacts of water availability and to effectively couple water withdrawals by human activities with natural hydrologic dynamics. At the core of any scientific approach to these issues there is the estimation of water withdrawals by industrial sectors in the form of water coefficients, which are measurements of the quantity of water withdrawn per dollar of GDP or output. Here, we focus on the contiguous United States and on the estimation of water coefficients for regional scale analyses. We first compare an established methodology for the estimation ofmore » national water coefficients with a parametric one we propose. Second, we introduce a method to estimate water coefficients at the level of ecological regions and we discuss how they reduce possible biases in regional analyses of water systems. Finally, we discuss advantages and limits of regional water coefficients.« less
Regional water coefficients for U.S. industrial sectors

DOE Office of Scientific and Technical Information (OSTI.GOV)

Boero, Riccardo; Pasqualini, Donatella

Designing policies for water systems management requires the capability to assess the economic impacts of water availability and to effectively couple water withdrawals by human activities with natural hydrologic dynamics. At the core of any scientific approach to these issues there is the estimation of water withdrawals by industrial sectors in the form of water coefficients, which are measurements of the quantity of water withdrawn per dollar of GDP or output. Here, we focus on the contiguous United States and on the estimation of water coefficients for regional scale analyses. We first compare an established methodology for the estimation ofmore » national water coefficients with a parametric one we propose. Second, we introduce a method to estimate water coefficients at the level of ecological regions and we discuss how they reduce possible biases in regional analyses of water systems. Finally, we discuss advantages and limits of regional water coefficients.« less
Seasonal origins of air masses transported to Mount Wrangell, Alaska, and comparison with the past atmospheric dust and tritium variations in its ice core

NASA Astrophysics Data System (ADS)

Yasunari, T. J.; Shiraiwa, T.; Kanamori, S.; Fujii, Y.; Igarashi, M.; Yamazaki, K.; Benson, C. S.; Hondoh, T.

2006-12-01

The North Pacific region is subject to various climatic phenomena such as the Pacific Decadal Oscillation (PDO), the El Niño-Southern Oscillation (ENSO), and the Arctic Oscillation (AO), significantly affecting the ocean and the atmosphere. Additionally, material circulation is also very active in this region such as spring dust storms in the desert and arid regions of East Asia and forest fires in Siberia and Alaska. Understanding the complex connections among the climatic phenomena and the material circulation would help in attempts to predict future climate changes. For this subject, we drilled a 50-m ice core at the summit of Mount Wrangell, which is located near the coast of Alaska (62°162'170"162°171'N, 144°162'170"162;°171'W, and 4100-m). We analyzed dust particle number density, tritium concentration, and 171 171 171 171 170 162 171 D in the core. The ice core spanned the years from 1992 to 2002 and we finally divided the years into five parts (early-spring; late-spring; summer; fall; winter). Dust and tritium amounts varied annually and intra-annually. For further understanding of the factors on those variations, we should know the origins of the seasonal dust and tritium. Hence, we examined their origins by the calculation of everyday 10-days backward trajectory analysis from January 1992 to August 2002 with 3-D wind data of the European Center for Medium-Range Weather Forecast (ECMWF). In early spring, the air mass from East Asia increased and it also explained dust increases in springtime, although the air contribution in winter increased too. In late spring, the air mass from the stratosphere increased, and it also corresponded to the stratospheric tritium increase in the ice core. The air masses from Siberia and the North Pacific in the mid-latitude always significantly contributed to Mount Wrangell, although those maximum contributions were fall and summer, respectively. The air mass originating in the interior of Alaska and North America did not contribute to Mount Wrangell so much. Intra-annual data of ice core is important for the discussion of detailed-seasonal climate variations in the periods when there are no meteorological data. Our preliminary study suggests that we may be able to obtain an important perspective on seasonal climate change in the past by connecting meteorological analysis with ice core data.
The X-ray Crystallographic Structure and Activity Analysis of a Pseudomonas-Specific Subfamily of the HAD Enzyme Superfamily Evidences a Novel Biochemical Function

DOE Office of Scientific and Technical Information (OSTI.GOV)

Peisach,E.; Wang, L.; Burroughs, A.

2008-01-01

The haloacid dehalogenase (HAD) superfamily is a large family of proteins dominated by phosphotransferases. Thirty-three sequence families within the HAD superfamily (HADSF) have been identified to assist in function assignment. One such family includes the enzyme phosphoacetaldehyde hydrolase (phosphonatase). Phosphonatase possesses the conserved Rossmanniod core domain and a C1-type cap domain. Other members of this family do not possess a cap domain and because the cap domain of phosphonatase plays an important role in active site desolvation and catalysis, the function of the capless family members must be unique. A representative of the capless subfamily, PSPTO{_}2114, from the plant pathogenmore » Pseudomonas syringae, was targeted for catalytic activity and structure analyses. The X-ray structure of PSPTO{_}2114 reveals a capless homodimer that conserves some but not all of the intersubunit contacts contributed by the core domains of the phosphonatase homodimer. The region of the PSPTO{_}2114 that corresponds to the catalytic scaffold of phosphonatase (and other HAD phosphotransfereases) positions amino acid residues that are ill suited for Mg+2 cofactor binding and mediation of phosphoryl group transfer between donor and acceptor substrates. The absence of phosphotransferase activity in PSPTO{_}2114 was confirmed by kinetic assays. To explore PSPTO{_}2114 function, the conservation of sequence motifs extending outside of the HADSF catalytic scaffold was examined. The stringently conserved residues among PSPTO{_}2114 homologs were mapped onto the PSPTO{_}2114 three-dimensional structure to identify a surface region unique to the family members that do not possess a cap domain. The hypothesis that this region is used in protein-protein recognition is explored to define, for the first time, HADSF proteins which have acquired a function other than that of a catalyst. Proteins 2008.« less
REM Sleep at its Core – Circuits, Neurotransmitters, and Pathophysiology

PubMed Central

Fraigne, Jimmy J.; Torontali, Zoltan A.; Snow, Matthew B.; Peever, John H.

2015-01-01

Rapid eye movement (REM) sleep is generated and maintained by the interaction of a variety of neurotransmitter systems in the brainstem, forebrain, and hypothalamus. Within these circuits lies a core region that is active during REM sleep, known as the subcoeruleus nucleus (SubC) or sublaterodorsal nucleus. It is hypothesized that glutamatergic SubC neurons regulate REM sleep and its defining features such as muscle paralysis and cortical activation. REM sleep paralysis is initiated when glutamatergic SubC cells activate neurons in the ventral medial medulla, which causes release of GABA and glycine onto skeletal motoneurons. REM sleep timing is controlled by activity of GABAergic neurons in the ventrolateral periaqueductal gray and dorsal paragigantocellular reticular nucleus as well as melanin-concentrating hormone neurons in the hypothalamus and cholinergic cells in the laterodorsal and pedunculo-pontine tegmentum in the brainstem. Determining how these circuits interact with the SubC is important because breakdown in their communication is hypothesized to underlie narcolepsy/cataplexy and REM sleep behavior disorder (RBD). This review synthesizes our current understanding of mechanisms generating healthy REM sleep and how dysfunction of these circuits contributes to common REM sleep disorders such as cataplexy/narcolepsy and RBD. PMID:26074874
Visualization and Quantification of Rotor Tip Vortices in Helicopter Flows

NASA Technical Reports Server (NTRS)

Kao, David L.; Ahmad, Jasim U.; Holst, Terry L.

2015-01-01

This paper presents an automated approach for effective extraction, visualization, and quantification of vortex core radii from the Navier-Stokes simulations of a UH-60A rotor in forward flight. We adopt a scaled Q-criterion to determine vortex regions and then perform vortex core profiling in these regions to calculate vortex core radii. This method provides an efficient way of visualizing and quantifying the blade tip vortices. Moreover, the vortices radii are displayed graphically in a plane.
Mesoproterozoic syntectonic garnet within Belt Supergroup metamorphic tectonites: Evidence of Grenville-age metamorphism and deformation along northwest Laurentia

USGS Publications Warehouse

Nesheim, T.O.; Vervoort, J.D.; McClelland, W.C.; Gilotti, J.A.; Lang, H.M.

2012-01-01

Northern Idaho contains Belt-Purcell Supergroup equivalent metamorphic tectonites that underwent two regional deformational and metamorphic events during the Mesoproterozoic. Garnet-bearing pelitic schists from the Snow Peak area of northern Idaho yield Lu-Hf garnet-whole rock ages of 1085??2. Ma, 1198??79. Ma, 1207??8. Ma, 1255??28. Ma, and 1314??2. Ma. Garnet from one sample, collected from the Clarkia area, was micro-drilled to obtain separate core and rim material that produced ages of 1347??10. Ma and 1102??47. Ma. The core versus rim ages from the micro-drilled sample along with the textural and spatial evidence of the other Lu-Hf garnet ages indicate two metamorphic garnet growth events at ~. 1330. Ma (M1) and ~. 1080. Ma (M2) with the intermediate ages representing mixed ages. Some garnet likely nucleated and grew M1 garnet cores that were later overgrown by younger M2 garnet rims. Most garnet throughout the Clarkia and Snow Peak areas are syntectonic with a regional penetrative deformational fabric, preserved as a strong preferred orientation of metamorphic matrix minerals (e.g., muscovite and biotite). The syntectonic garnets are interpreted to represent one regional, coeval metamorphic and deformation event at ~. 1080. Ma, which overlaps in time with the Grenville Orogeny. The older ~. 1330. Ma ages may represent an extension of the East Kootenay Orogeny described in western Canada. These deformational and metamorphic events indicate that western Laurentia (North America) was tectonically active in the Mesoproterozoic and during the assembly of the supercontinent Rodinia. ?? 2011 Elsevier B.V.
Activation of HIV-1 pre-mRNA 3' processing in vitro requires both an upstream element and TAR.

PubMed Central

Gilmartin, G M; Fleming, E S; Oetjen, J

1992-01-01

The architecture of the human immunodeficiency virus type 1 (HIV-1) genome presents an intriguing dilemma for the 3' processing of viral transcripts--to disregard a canonical 'core' poly(A) site processing signal present at the 5' end of the transcript and yet to utilize efficiently an identical signal that resides at the 3' end of the message. The choice of processing sites in HIV-1 appears to be influenced by two factors: (i) proximity to the cap site, and (ii) sequences upstream of the core poly(A) site. We now demonstrate that an in vivo-defined upstream element that resides within the U3 region, 76 nucleotides upstream of the AAUAAA hexamer, acts specifically to enhance 3' processing at the HIV-1 core poly(A) site in vitro. We furthermore show that efficient in vitro 3' processing requires the RNA stem-loop structure of TAR, which serves to juxtapose spatially the upstream element and the core poly(A) site. An analysis of the stability of 3' processing complexes formed at the HIV-1 poly(A) site in vitro suggests that the upstream element may function by increasing processing complex stability at the core poly(A) site. Images PMID:1425577
Reaction mechanism for oxygen evolution on RuO 2, IrO 2, and RuO 2@IrO 2 core-shell nanocatalysts

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ma, Zhong; Zhang, Yu; Liu, Shizhong

Iridium dioxide, IrO 2, is second to the most active RuO 2 catalyst for the oxygen evolution reaction (OER) in acid, and is used in proton exchange membrane water electrolyzers due to its high durability. In order to improve the activity of IrO 2-based catalysts, we prepared RuO 2@IrO 2 core-shell nanocatalysts using carbon-supported Ru as the template. At 1.48 V, the OER specific activity of RuO 2@IrO 2 is threefold that of IrO 2. While the activity volcano plots over wide range of materials have been reported, zooming into the top region to clarify the rate limiting steps ofmore » most active catalysts is important for further activity enhancement. Here, we verified theory-proposed sequential water dissociation pathway in which the O—O bond forms on a single metal site, not via coupling of two adsorbed intermediates, by fitting measured polarization curves using a kinetic equation with the free energies of adsorption and activation as the parameters. Consistent with theoretical calculations, we show that the OER activities of IrO 2 and RuO 2@IrO 2 are limited by the formation of O adsorbed phase, while the OOH formation on the adsorbed O limits the reaction rate on RuO 2.« less

Reaction mechanism for oxygen evolution on RuO 2, IrO 2, and RuO 2@IrO 2 core-shell nanocatalysts

DOE PAGES

Ma, Zhong; Zhang, Yu; Liu, Shizhong; ...

2017-10-28

Iridium dioxide, IrO 2, is second to the most active RuO 2 catalyst for the oxygen evolution reaction (OER) in acid, and is used in proton exchange membrane water electrolyzers due to its high durability. In order to improve the activity of IrO 2-based catalysts, we prepared RuO 2@IrO 2 core-shell nanocatalysts using carbon-supported Ru as the template. At 1.48 V, the OER specific activity of RuO 2@IrO 2 is threefold that of IrO 2. While the activity volcano plots over wide range of materials have been reported, zooming into the top region to clarify the rate limiting steps ofmore » most active catalysts is important for further activity enhancement. Here, we verified theory-proposed sequential water dissociation pathway in which the O—O bond forms on a single metal site, not via coupling of two adsorbed intermediates, by fitting measured polarization curves using a kinetic equation with the free energies of adsorption and activation as the parameters. Consistent with theoretical calculations, we show that the OER activities of IrO 2 and RuO 2@IrO 2 are limited by the formation of O adsorbed phase, while the OOH formation on the adsorbed O limits the reaction rate on RuO 2.« less
Uranium and Its Decay Products in Floodplain Sediments from the River Fal

NASA Astrophysics Data System (ADS)

Millward, G. E.; Blake, W. H.; Little, R.; Couldrick, L.

2012-04-01

European river basins are subject to longer-term storage of legacy contaminants in sedimentary sinks and their potential release presents a credible risk to achieving water quality targets required by the EU Water Framework Directive. The catchment of the River Fal, south west England, is extensively mineralised and has been greatly impacted by heavy metal mining. Uranium and radium were extracted and processed between 1870 and 1930 and spoil tips along the channel banks are assumed to have been a source of radionuclides into the river. Radionuclides were determined in five cores obtained from the river floodplain, including a reference core positioned upstream of the uranium mine enabling evaluation of its impact on past and contemporary sediment quality. The core was sectioned into 1 cm thick slices and they were analysed by gamma spectrometry for products of the U-238 decay series, i.e. Th-234 (a surrogate for U-238), Pb-214 (a surrogate for Ra-226), Pb-210 and fallout Am-241 and Cs-137. Peak Cs-137 concentrations at mid-depth were associated with fallout after atmospheric nuclear tests in 1963 and were used to estimate sedimentation rates. However, the activity concentrations of Pb-210 were elevated at all depths and the result indicated a significant input of unsupported Pb-210 (linked to processed spoil material) throughout the period of deposition. At some sites, peak activity concentrations of Th-234 suggested inputs from mining activity during major release and/or flood events. The cores downstream of the mine all had higher radionuclide inventories, of the order 105 Bq m-2, compared to the reference core due to the presences of products from the U-238 decay series. In addition, the inventories did not decrease systematically downstream indicating storage regions within the river channel. Storage of such legacy contaminants at levels in excess of contemporary environmental quality guidelines raises important questions and challenges for floodplain use and management.
DOE Office of Scientific and Technical Information (OSTI.GOV)

Sherman, Andrew J

A heterogeneous body having ceramic rich cermet regions in a more ductile metal matrix. The heterogeneous bodies are formed by thermal spray operations on metal substrates. The thermal spray operations apply heat to a cermet powder and project it onto a solid substrate. The cermet powder is composed of complex composite particles in which a complex ceramic-metallic core particle is coated with a matrix precursor. The cermet regions are generally comprised of complex ceramic-metallic composites that correspond approximately to the core particles. The cermet regions are approximately lenticular shaped with an average width that is at least approximately twice themore » average thickness. The cermet regions are imbedded within the matrix phase and generally isolated from one another. They have obverse and reverse surfaces. The matrix phase is formed from the matrix precursor coating on the core particles. The amount of heat applied during the formation of the heterogeneous body is controlled so that the core particles soften but do not become so fluid that they disperse throughout the matrix phase. The force of the impact on the surface of the substrate tends to flatten them. The flattened cermet regions tend to be approximately aligned with one another in the body.« less
The structure of unliganded reverse transcriptase from the human immunodeficiency virus type 1.

PubMed Central

Rodgers, D W; Gamblin, S J; Harris, B A; Ray, S; Culp, J S; Hellmig, B; Woolf, D J; Debouck, C; Harrison, S C

1995-01-01

The crystal structure of the reverse transcriptase (RT) from the type 1 human immunodeficiency virus has been determined at 3.2-A resolution. Comparison with complexes between RT and the polymerase inhibitor Nevirapine [Kohlstaedt, L.A., Wang, J., Friedman, J.M., Rice, P.A. & Steitz, T.A. (1992) Science 256, 1783-1790] and between RT and an oligonucleotide [Jacobo-Molina, A., Ding, J., Nanni, R., Clark, A. D., Lu, X., Tantillo, C., Williams, R. L., Kamer, G., Ferris, A. L., Clark, P., Hizi, A., Hughes, S. H. & Arnold, E. (1993) Proc. Natl. Acad. Sci. USA 90, 6320-6324] reveals changes associated with ligand binding. The enzyme is a heterodimer (p66/p51), with domains labeled "fingers," "thumb," "palm," and "connection" in both subunits, and a ribonuclease H domain in the larger subunit only. The most striking difference between RT and both complex structures is the change in orientation of the p66 thumb (approximately 33 degrees rotation). Smaller shifts relative to the core of the molecule were also found in other domains, including the p66 fingers and palm, which contain the polymerase active site. Within the polymerase catalytic region itself, there are no rearrangements between RT and the RT/DNA complex. In RT/Nevirapine, the drug binds in the p66 palm near the polymerase active site, a region that is well-packed hydrophobic core in the unliganded enzyme. Room for the drug is provided by movement of a small beta-sheet within the palm domain of the Nevirapine complex. The rearrangement within the palm and thumb, as well as domain shifts relative to the enzyme core, may prevent correct placement of the oligonucleotide substrate when the drug is bound. Images Fig. 1 Fig. 2 Fig. 3 Fig. 4 PMID:7532306
Structure in the lowermost mantle from seismic anisotropy

NASA Astrophysics Data System (ADS)

Walpole, J.; Wookey, J. M.; Nowacki, A.; Walker, A.; Kendall, J. M.; Masters, G.; Forte, A. M.

2017-12-01

Anisotropy is well established in D'' and places important constraints on the nature and dynamics of this elusive region. We present the results of a recent study probing anisotropy in D'', over a large area, using shear wave splitting on core-reflected ScS phases. Our dataset contains laterally continuous coverage beneath a large swath of east Asia - extending about 3000 km along the CMB - from south-east Asia to the north-east Pacific. The centre of this area represents a large down-welling core for subduction that has occurred over several super-continent cycles. In the centre of this region we observe a clear VSV}>V{SH fabric, in direct conflict with the prevailing view that fast, `cold', regions are associated with VSH}>V{SV fabric. Furthermore, systematic rotation of the fast axis traces out an apparent dome-like feature extending over thousands of km, albeit complicated by some short-scale variability. The dataset also samples regions where slab material may be actively impinging on the CMB; and a region corresponding to the edge of the Pacific LLSVP. We interpret our results in light of a combined computational geodynamic-petrofabric-seismic study designed to test the possibility that anisotropy is caused by the lattice preferred orientation of post-perovskite. We take into account the important finite-frequency effects of wave propagation in our synthetics by using the SPECFEM3D_GLOBE code; this can lead to drastically different results when compared to the less accurate ray theory.
Mesoscale modeling of vacancy-mediated Si segregation near an edge dislocation in Ni under irradiation

NASA Astrophysics Data System (ADS)

Li, Zebo; Trinkle, Dallas R.

2017-04-01

We use a continuum method informed by transport coefficients computed using self-consistent mean field theory to model vacancy-mediated diffusion of substitutional Si solutes in FCC Ni near an a/2 [1 1 ¯0 ] (111 ) edge dislocation. We perform two sequential simulations: first under equilibrium boundary conditions and then under irradiation. The strain field around the dislocation induces heterogeneity and anisotropy in the defect transport properties and determines the steady-state vacancy and Si distributions. At equilibrium both vacancies and Si solutes diffuse to form Cottrell atmospheres with vacancies accumulating in the compressive region above the dislocation core while Si segregates to the tensile region below the core. Irradiation raises the bulk vacancy concentration, driving vacancies to flow into the dislocation core. The out-of-equilibrium vacancy fluxes drag Si atoms towards the core, causing segregation to the compressive region, despite Si being an oversized solute in Ni.
Looking for high-mass young stellar objects: H2O and OH masers in ammonia cores

NASA Astrophysics Data System (ADS)

Codella, C.; Cesaroni, R.; López-Sepulcre, A.; Beltrán, M. T.; Furuya, R.; Testi, L.

2010-02-01

Context. The earliest stages of high-mass star formation have yet to be characterised well, because high-angular resolution observations are required to infer the properties of the molecular gas hosting the newly formed stars. Aims: We search for high-mass molecular cores in a large sample of 15 high-mass star-forming regions that are observed at high-angular resolution, extending a pilot survey based on a smaller number of objects. Methods: The sample was chosen from surveys of H2O and OH masers to favour the earliest phases of high-mass star formation. Each source was first observed with the 32-m single-dish Medicina antenna in the (1, 1) and (2, 2) inversion transitions at 1.3 cm of ammonia, which is an excellent tracer of dense gas. High-resolution maps in the NH3(2, 2) and (3, 3) lines and the 1.3 cm continuum were obtained successively with the VLA interferometer. Results: We detect continuum emission in almost all the observed star-forming regions, which corresponds to extended and UCHii regions created by young stellar objects with typical luminosities of ˜10^4~L⊙. However, only in three cases do we find a projected overlap between Hii regions and H2O and OH maser spots. On the other hand, the VLA images detect eight ammonia cores closely associated with the maser sources. The ammonia cores have sizes of ˜10^4 AU, and high masses (up to 104M⊙), and are very dense (from ˜10^6 to a few ×10^9 cm-3). The typical relative NH3 abundance is ≤10-7, in agreement with previous measurements in high-mass star-forming regions. Conclusions: The statistical analysis of the distribution between H2O and OH masers, NH3 cores, and Hii regions confirms that the earliest stages of high-mass star formation are characterised by high-density molecular cores with temperatures of on average ≥30 K, either without a detectable ionised region or associated with a hypercompact Hii region.
Conserved Amphipathic Helices Mediate Lipid Droplet Targeting of Perilipins 1–3*

PubMed Central

Rowe, Emily R.; Mimmack, Michael L.; Barbosa, Antonio D.; Haider, Afreen; Isaac, Iona; Ouberai, Myriam M.; Thiam, Abdou Rachid; Patel, Satish; Saudek, Vladimir; Siniossoglou, Symeon; Savage, David B.

2016-01-01

Perilipins (PLINs) play a key role in energy storage by orchestrating the activity of lipases on the surface of lipid droplets. Failure of this activity results in severe metabolic disease in humans. Unlike all other lipid droplet-associated proteins, PLINs localize almost exclusively to the phospholipid monolayer surrounding the droplet. To understand how they sense and associate with the unique topology of the droplet surface, we studied the localization of human PLINs in Saccharomyces cerevisiae, demonstrating that the targeting mechanism is highly conserved and that 11-mer repeat regions are sufficient for droplet targeting. Mutations designed to disrupt folding of this region into amphipathic helices (AHs) significantly decreased lipid droplet targeting in vivo and in vitro. Finally, we demonstrated a substantial increase in the helicity of this region in the presence of detergent micelles, which was prevented by an AH-disrupting missense mutation. We conclude that highly conserved 11-mer repeat regions of PLINs target lipid droplets by folding into AHs on the droplet surface, thus enabling PLINs to regulate the interface between the hydrophobic lipid core and its surrounding hydrophilic environment. PMID:26742848
Behavior of predicted convective clouds and precipitation in the high-resolution Unified Model over the Indian summer monsoon region

NASA Astrophysics Data System (ADS)

Jayakumar, A.; Sethunadh, Jisesh; Rakhi, R.; Arulalan, T.; Mohandas, Saji; Iyengar, Gopal R.; Rajagopal, E. N.

2017-05-01

National Centre for Medium Range Weather Forecasting high-resolution regional convective-scale Unified Model with latest tropical science settings is used to evaluate vertical structure of cloud and precipitation over two prominent monsoon regions: Western Ghats (WG) and Monsoon Core Zone (MCZ). Model radar reflectivity generated using Cloud Feedback Model Intercomparison Project Observation Simulator Package along with CloudSat profiling radar reflectivity is sampled for an active synoptic situation based on a new method using Budyko's index of turbulence (BT). Regime classification based on BT-precipitation relationship is more predominant during the active monsoon period when convective-scale model's resolution increases from 4 km to 1.5 km. Model predicted precipitation and vertical distribution of hydrometeors are found to be generally in agreement with Global Precipitation Measurement products and BT-based CloudSat observation, respectively. Frequency of occurrence of radar reflectivity from model implies that the low-level clouds below freezing level is underestimated compared to the observations over both regions. In addition, high-level clouds in the model predictions are much lesser over WG than MCZ.
Optimizing performance by improving core stability and core strength.

PubMed

Hibbs, Angela E; Thompson, Kevin G; French, Duncan; Wrigley, Allan; Spears, Iain

2008-01-01

Core stability and core strength have been subject to research since the early 1980s. Research has highlighted benefits of training these processes for people with back pain and for carrying out everyday activities. However, less research has been performed on the benefits of core training for elite athletes and how this training should be carried out to optimize sporting performance. Many elite athletes undertake core stability and core strength training as part of their training programme, despite contradictory findings and conclusions as to their efficacy. This is mainly due to the lack of a gold standard method for measuring core stability and strength when performing everyday tasks and sporting movements. A further confounding factor is that because of the differing demands on the core musculature during everyday activities (low load, slow movements) and sporting activities (high load, resisted, dynamic movements), research performed in the rehabilitation sector cannot be applied to the sporting environment and, subsequently, data regarding core training programmes and their effectiveness on sporting performance are lacking. There are many articles in the literature that promote core training programmes and exercises for performance enhancement without providing a strong scientific rationale of their effectiveness, especially in the sporting sector. In the rehabilitation sector, improvements in lower back injuries have been reported by improving core stability. Few studies have observed any performance enhancement in sporting activities despite observing improvements in core stability and core strength following a core training programme. A clearer understanding of the roles that specific muscles have during core stability and core strength exercises would enable more functional training programmes to be implemented, which may result in a more effective transfer of these skills to actual sporting activities.
Description of core samples returned by Apollo 12

NASA Technical Reports Server (NTRS)

Lindsay, J. F.; Fryxell, R.

1971-01-01

Three core samples were collected by the Apollo 12 astronauts. Two are single cores, one of which (sample 12026) was collected close to the lunar module during the first extravehicular activity period and is 19.3 centimeters long. The second core (sample 12027) was collected at Sharp Crater during the second extravehicular activity period and is 17.4 centimeters long. The third sample is a double core (samples 12025 and 12028), which was collected near Halo Crater during the second extravehicular activity period. Unlike the other cores, the double-drive-tube core sample has complex layering with at least 10 clearly defined stratigraphic units. This core sample is approximately 41 centimeters long.
REMOVING COOL CORES AND CENTRAL METALLICITY PEAKS IN GALAXY CLUSTERS WITH POWERFUL ACTIVE GALACTIC NUCLEUS OUTBURSTS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Guo Fulai; Mathews, William G., E-mail: fulai@ucolick.or

2010-07-10

Recent X-ray observations of galaxy clusters suggest that cluster populations are bimodally distributed according to central gas entropy and are separated into two distinct classes: cool core (CC) and non-cool core (NCC) clusters. While it is widely accepted that active galactic nucleus (AGN) feedback plays a key role in offsetting radiative losses and maintaining many clusters in the CC state, the origin of NCC clusters is much less clear. At the same time, a handful of extremely powerful AGN outbursts have recently been detected in clusters, with a total energy {approx}10{sup 61}-10{sup 62} erg. Using two-dimensional hydrodynamic simulations, we showmore » that if a large fraction of this energy is deposited near the centers of CC clusters, which is likely common due to dense cores, these AGN outbursts can completely remove CCs, transforming them to NCC clusters. Our model also has interesting implications for cluster abundance profiles, which usually show a central peak in CC systems. Our calculations indicate that during the CC to NCC transformation, AGN outbursts efficiently mix metals in cluster central regions and may even remove central abundance peaks if they are not broad enough. For CC clusters with broad central abundance peaks, AGN outbursts decrease peak abundances, but cannot effectively destroy the peaks. Our model may simultaneously explain the contradictory (possibly bimodal) results of abundance profiles in NCC clusters, some of which are nearly flat, while others have strong central peaks similar to those in CC clusters. A statistical analysis of the sizes of central abundance peaks and their redshift evolution may shed interesting insights on the origin of both types of NCC clusters and the evolution history of thermodynamics and AGN activity in clusters.« less
The star-forming cores in the centre of the Trifid nebula (M 20): from Herschel to the near-infrared

NASA Astrophysics Data System (ADS)

Tapia, M.; Persi, P.; Román-Zúñiga, C.; Elia, D.; Giovannelli, F.; Sabau-Graziati, L.

2018-04-01

A new detailed infrared (IR) study of eight star-forming dense condensations (TCs) in M 20, the Trifid nebula, is presented. The aim is to determine the physical properties of the dust in such globules and establish the presence and properties of their embedded protostellar and/or young stellar population. For this, we analysed new Herschel far-IR and Calar Alto near-IR images of the region, combined with Spitzer Infrared Array Camera (Spitzer/IRAC) archival observations. We confirm the presence of several young stellar objects (YSOs), most with mid-IR colours of Class II sources in all but one of the observed cores. Five TCs are dominated in the far-IR by Class I sources with bolometric luminosities between 100 and 500 L⊙. We report the discovery of a possible counterjet to HH 399 and its protostellar engine inside the photodissociation region TC2, as well as a bipolar outflow system, signposted by symmetric H2 emission knots, embedded in TC3. The present results are compatible with previous suggestions that star formation has been active in the region for some 3 × 105 yr, and that the most recent events in some of these TCs may have been triggered by the expansion of the H II region. We also obtained a revised value for the distance to M 20 of 2.0 ± 0.1 kpc.
High-Resolution Holocene Records of Paleoceanographic and Paleoclimatic Variability from the Southern Alaskan Continental Margin

NASA Astrophysics Data System (ADS)

Finney, B. P.; Jaeger, J. M.; Mix, A. C.; Cowan, E. A.; Gulick, S. S.; Mayer, L. A.; Pisias, N. G.; Powell, R. D.; Prahl, F.; Stoner, J. S.

2004-12-01

We are investigating sediments from the fjords and continental margin of southern Alaska to develop high-resolution climatic and oceanographic records for the Late Quaternary. Our goal is to better understand linkages between climatic, terrestrial and oceanic systems in this tectonically active and biologically productive region. A field program was conducted aboard the R/V Maurice Ewing in August/September 2004 utilizing geophysical surveys (high-resolution swath bathymetric and backscatter imaging, shallow sub-bottom profiling, and where permitted, high-resolution seismic reflection profiling), piston and multi-coring, and CTD/water sampling at about 30 sites in this region. Cores are being analyzed for sedimentological, microfossil, geochemical and stable isotopic proxies, with chronologies constrained by Pb-210, AMS radiocarbon, tephrochronolgic and paleomagnetic dating. Our preliminary results demonstrate that these rapidly accumulating sedimentary archives can resolve environmental changes on annual to decadal timescales. Records of recent changes in lithogenic sediment accumulation and biological productivity on the Gulf of Alaska shelf track historical climatic data that extends to the early 20th century in this region. The records also correlate with multi-decadal climate regimes during the Little Ice Age as suggested by tree-ring, glacial advance and salmon abundance records from nearby coastal sites. Jack Dymond's enthusiasm for collaborative, interdisciplinary research will help guide us in unraveling the fingerprints of key processes in this relatively unexplored region.
Impact of extended prostate biopsy including apical anterior region for cancer detection and prediction of surgical margin status for radical prostatectomy.

PubMed

Hashimoto, Kohei; Shinkai, Nobuo; Tanaka, Toshiaki; Masumori, Naoya

2017-06-01

We investigated diagnostic yield of initial biopsy and repeated biopsy including apical cores. We investigated 573 consecutive men with PSA of ≤20 ng/ml who underwent prostate biopsy between 2004 and 2013. The initial 14-core biopsy consisted of the sextant type, lateral sites at the base and middle, lateral apices (la) at anterior horn sites, and apical anterior sites (aa). The repeated 18-core biopsy consisted of the initial 14-core biopsy with four transition zone (TZ) sites at the base (tzb) and middle (tzm). Prostate cancer was diagnosed in 178 (38.9%) of 458 men with the initial 14-core biopsy, and 44 (38.3%) of 115 men with the repeated 18-core biopsy. In the initial biopsy setting, the unique cancer detection rate was high in apical sites (apex, la, and aa: 6.2%, 6.2% and 5.1%, respectively). In the repeated setting, it was high in the TZ site in addition to the apical site (apex, la, aa, tzm, and tzb: 6.8%, 6.8%, 11.4%, 9.1% and 11.4%, respectively). The positive SM rate at the apex was higher in patients whose cancer was detected only in sites other than the sextant region than for those in the sextant region (36.4% vs. 14.8%, P = 0.037). The initial 14-core and the repeated 18-core biopsy scheme including apical anterior cores are feasible for prostate cancer detection. We propose that apical biopsy cores can be used to predict not only the existence of cancer but also surgical margin status at the apex. © The Author 2017. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.
Ni@Ru and NiCo@Ru Core-Shell Hexagonal Nanosandwiches with a Compositionally Tunable Core and a Regioselectively Grown Shell.

PubMed

Hwang, Hyeyoun; Kwon, Taehyun; Kim, Ho Young; Park, Jongsik; Oh, Aram; Kim, Byeongyoon; Baik, Hionsuck; Joo, Sang Hoon; Lee, Kwangyeol

2018-01-01

The development of highly active electrocatalysts is crucial for the advancement of renewable energy conversion devices. The design of core-shell nanoparticle catalysts represents a promising approach to boost catalytic activity as well as save the use of expensive precious metals. Here, a simple, one-step synthetic route is reported to prepare hexagonal nanosandwich-shaped Ni@Ru core-shell nanoparticles (Ni@Ru HNS), in which Ru shell layers are overgrown in a regioselective manner on the top and bottom, and around the center section of a hexagonal Ni nanoplate core. Notably, the synthesis can be extended to NiCo@Ru core-shell nanoparticles with tunable core compositions (Ni 3 Co x @Ru HNS). Core-shell HNS structures show superior electrocatalytic activity for the oxygen evolution reaction (OER) to a commercial RuO 2 black catalyst, with their OER activity being dependent on their core compositions. The observed trend in OER activity is correlated to the population of Ru oxide (Ru 4+ ) species, which can be modulated by the core compositions. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.
Preparation and biological activities of anti-HER2 monoclonal antibodies with fully core-fucosylated homogeneous bi-antennary complex-type glycans.

PubMed

Tsukimura, Wataru; Kurogochi, Masaki; Mori, Masako; Osumi, Kenji; Matsuda, Akio; Takegawa, Kaoru; Furukawa, Kiyoshi; Shirai, Takashi

2017-12-01

Recently, the absence of a core-fucose residue in the N-glycan has been implicated to be important for enhancing antibody-dependent cellular cytotoxicity (ADCC) activity of immunoglobulin G monoclonal antibodies (mAbs). Here, we first prepared anti-HER2 mAbs having two core-fucosylated N-glycan chains with the single G2F, G1aF, G1bF, or G0F structure, together with those having two N-glycan chains with a single non-core-fucosylated corresponding structure for comparison, and determined their biological activities. Dissociation constants of mAbs with core-fucosylated N-glycans bound to recombinant Fcγ-receptor type IIIa variant were 10 times higher than those with the non-core-fucosylated N-glycans, regardless of core glycan structures. mAbs with the core-fucosylated N-glycans had markedly reduced ADCC activities, while those with the non-core-fucosylated N-glycans had high activities. These results indicate that the presence of a core-fucose residue in the N-glycan suppresses the binding to the Fc-receptor and the induction of ADCC of anti-HER2 mAbs.
HCV core protein induces hepatic lipid accumulation by activating SREBP1 and PPAR{gamma}

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kim, Kook Hwan; Hong, Sung Pyo; Kim, KyeongJin

2007-04-20

Hepatic steatosis is a common feature in patients with chronic hepatitis C virus (HCV) infection. HCV core protein plays an important role in the development of hepatic steatosis in HCV infection. Because SREBP1 (sterol regulatory element binding protein 1) and PPAR{gamma} (peroxisome proliferators-activated receptor {gamma}) are involved in the regulation of lipid metabolism of hepatocyte, we sought to determine whether HCV core protein may impair the expression and activity of SREBP1 and PPAR{gamma}. In this study, it was demonstrated that HCV core protein increases the gene expression of SREBP1 not only in Chang liver, Huh7, and HepG2 cells transiently transfectedmore » with HCV core protein expression plasmid, but also in Chang liver-core stable cells. Furthermore, HCV core protein enhanced the transcriptional activity of SREBP1. In addition, HCV core protein elevated PPAR{gamma} transcriptional activity. However, HCV core protein had no effect on PPAR{gamma} gene expression. Finally, we showed that HCV core protein stimulates the genes expression of lipogenic enzyme and fatty acid uptake associated protein. Therefore, our finding provides a new insight into the mechanism of hepatic steatosis by HCV infection.« less
A detailed Holocene glacial-periglacial reconstruction based on multidisciplinary studies of a 60 m permafrost core from central Svalbard

NASA Astrophysics Data System (ADS)

Hvidtfeldt Christiansen, Hanne; Elberling, Bo; Gilbert, Graham L.; Thiel, Christine; Murray, Andrew; Buylaert, Jan-Pieter; Dypvik, Henning; Lomstein, Bente; Hovgaard, Jonas; Christensen, Anne T.; Mørkved, Pål T.; Reigstad, Laila J.; Fromreide, Siren; Seidenkrantz, Marit-Solveig

2014-05-01

During summer 2012, a 60 m sedimentary permafrost core was retrieved from the lower part of the Adventdalen Valley, central Svalbard, as part of the Longyearbyen CO2 project. The core was taken in 3 m long sections, with 20 % core loss, and reached the sedimentary bedrock (Lower Cretaceous). Thus our samples had the potential to represent the entire Quaternary and reflect changes in the sedimentary environments through time. The stratigraphy and sedimentology of the core was first investigated, to establish an overall geological model for the sampling site. The general stratigraphy encompasses a layer of basal till at the bottom of the core. This is overlain by marine sediments documenting a transition from glacial-proximal to open-marine conditions. Subsequently, a thick package of deltaic sediments records the progradation of the local river system. Finally, aeolian sediments, characterizing the modern environment, form the top few meters of the core. The ice content of the permafrost is generally low. Gravimetric water content generally ranges between 20% and 40%, but is considerably higher in some ice-rich layers. High resolution optically stimulated luminescence dating of the core sediment shows that deposition was very fast and took place primarily during the mid Holocene, with very rapid sedimentation of around 4 m/ka. With the onset of aeolian deposition (around 3-4 ka) the sedimentation rate decreased significantly to 1m/ka. The microbial diversity and activity of the core are being studied displaying decreasing activity with depth. Microbial community and functional gene numbers indicate variations with depth and geochemistry. Incubation studies have been performed primarily on the upper 30 m, and indicate a potential CO2 production from all depth intervals being studied. The potential for using foraminifer studies for both dating and palaeoenvironmental reconstructions are evaluated with the intension of comparison with previous studies of marine sediment cores both from the fjords in the Svalbard area and from the Barents Sea and Fram Strait region. This multidisciplinary approach is allowing us to build the first detailed palaeoenvironmental reconstruction of the Holocene glacial-periglacial interaction in the lowlands of central Svalbard; this includes a detailed reconstruction of the permafrost conditions.
Plasma Properties and Magnetic Field Structure of the Solar Corona, Based on Coordinated Max '91 Observations from SERTS, the VLA, and Magnetographs

NASA Technical Reports Server (NTRS)

Brosius, Jeffrey W. (Principal Investigator)

1996-01-01

The plasma properties and magnetic field structure of the solar corona were determined using coordinated observations obtained with NASA/GSFC's Solar EUV Rocket Telescope and Spectrograph (SERTS), the Very Large Array (VLA), and Kitt Peak photospheric longitudinal magnetograms. A problem was identified with the SERTS calibration as determined from laboratory measurements. A revised calibration curve was derived by requiring that the numerous available measured line intensity ratios agreed with their respective theoretical values. Densities were derived from line intensity ratios, and active region densities were found to typically exceed quiet Sun densities by factors of only about 2. The active region density was found to remain constant across the SERTS slit, despite the fact that the emission line intensities vary significantly. This indicates that the product of the path length and the volume filling factor must vary significantly from the active region outskirts to the central core. Filling factors were derived and found to range from much less than one to nearly unity. Wavelength shifts were examined along the SERTS slit in the spatially resolved spectra, but no evidence was found for significant Doppler shifts in active region 7563 or in the quiet Sun. The numerical procedure developed by Monsignori-Fossi and Landini was used to derive the active region and quiet sun differential emission measure (DEM) from the spatially averaged spectra. A DEM was estimated for each spatial pixel in the two dimensional active region images by scaling the averaged active region DEM based upon corresponding pixel intensities of SERTS Mg IX, Fe XV, and Fe XVI images. These results, along with density measurements, were used in an IDL computer code which calculated the temperature dependence of the coronal magnetic field in each spatial pixel by minimizing the difference between the observed and calculated 20 and 6 cm microwave brightness temperatures.

Differential spatial activity patterns of acupuncture by a machine learning based analysis

NASA Astrophysics Data System (ADS)

You, Youbo; Bai, Lijun; Xue, Ting; Zhong, Chongguang; Liu, Zhenyu; Tian, Jie

2011-03-01

Acupoint specificity, lying at the core of the Traditional Chinese Medicine, underlies the theoretical basis of acupuncture application. However, recent studies have reported that acupuncture stimulation at nonacupoint and acupoint can both evoke similar signal intensity decreases in multiple regions. And these regions were spatially overlapped. We used a machine learning based Support Vector Machine (SVM) approach to elucidate the specific neural response pattern induced by acupuncture stimulation. Group analysis demonstrated that stimulation at two different acupoints (belong to the same nerve segment but different meridians) could elicit distinct neural response patterns. Our findings may provide evidence for acupoint specificity.
Temperature and moisture effects on greenhouse gas emissions from deep active-layer boreal soils

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bond-Lamberty, Ben; Smith, A. Peyton; Bailey, Vanessa L.

Rapid climatic changes, rising air temperatures, and increased fires are expected to drive permafrost degradation and alter soil carbon (C) cycling in many high-latitude ecosystems. How these soils will respond to changes in their temperature, moisture, and overlying vegetation is uncertain but critical to understand given the large soil C stocks in these regions. We used a laboratory experiment to examine how temperature and moisture control CO 2 and CH 4 emissions from mineral soils sampled from the bottom of the annual active layer, i.e., directly above permafrost, in an Alaskan boreal forest. Gas emissions from 30 cores, subjected tomore » two temperatures and either field moisture conditions or experimental drought, were tracked over a 100-day incubation; we also measured a variety of physical and chemical characteristics of the cores. Gravimetric water content was 0.31 ± 0.12 (unitless) at the beginning of the incubation; cores at field moisture were unchanged at the end, but drought cores had declined to 0.06 ± 0.04. Daily CO 2 fluxes were positively correlated with incubation chamber temperature, core water content, and percent soil nitrogen. They also had a temperature sensitivity ( Q 10) of 1.3 and 1.9 for the field moisture and drought treatments, respectively. Daily CH 4 emissions were most strongly correlated with percent nitrogen, but neither temperature nor water content was a significant first-order predictor of CH 4 fluxes. The cumulative production of C from CO 2 was over 6 orders of magnitude higher than that from CH 4; cumulative CO 2 was correlated with incubation temperature and moisture treatment, with drought cores producing 52–73 % lower C. Cumulative CH 4 production was unaffected by any treatment. These results suggest that deep active-layer soils may be sensitive to changes in soil moisture under aerobic conditions, a critical factor as discontinuous permafrost thaws in interior Alaska. Furthermore, deep but unfrozen high-latitude soils have been shown to be strongly affected by long-term experimental warming, and these results provide insight into their future dynamics and feedback potential with future climate change.« less
Temperature and moisture effects on greenhouse gas emissions from deep active-layer boreal soils

DOE PAGES

Bond-Lamberty, Ben; Smith, A. Peyton; Bailey, Vanessa L.

2016-12-21

Rapid climatic changes, rising air temperatures, and increased fires are expected to drive permafrost degradation and alter soil carbon (C) cycling in many high-latitude ecosystems. How these soils will respond to changes in their temperature, moisture, and overlying vegetation is uncertain but critical to understand given the large soil C stocks in these regions. We used a laboratory experiment to examine how temperature and moisture control CO 2 and CH 4 emissions from mineral soils sampled from the bottom of the annual active layer, i.e., directly above permafrost, in an Alaskan boreal forest. Gas emissions from 30 cores, subjected tomore » two temperatures and either field moisture conditions or experimental drought, were tracked over a 100-day incubation; we also measured a variety of physical and chemical characteristics of the cores. Gravimetric water content was 0.31 ± 0.12 (unitless) at the beginning of the incubation; cores at field moisture were unchanged at the end, but drought cores had declined to 0.06 ± 0.04. Daily CO 2 fluxes were positively correlated with incubation chamber temperature, core water content, and percent soil nitrogen. They also had a temperature sensitivity ( Q 10) of 1.3 and 1.9 for the field moisture and drought treatments, respectively. Daily CH 4 emissions were most strongly correlated with percent nitrogen, but neither temperature nor water content was a significant first-order predictor of CH 4 fluxes. The cumulative production of C from CO 2 was over 6 orders of magnitude higher than that from CH 4; cumulative CO 2 was correlated with incubation temperature and moisture treatment, with drought cores producing 52–73 % lower C. Cumulative CH 4 production was unaffected by any treatment. These results suggest that deep active-layer soils may be sensitive to changes in soil moisture under aerobic conditions, a critical factor as discontinuous permafrost thaws in interior Alaska. Furthermore, deep but unfrozen high-latitude soils have been shown to be strongly affected by long-term experimental warming, and these results provide insight into their future dynamics and feedback potential with future climate change.« less
Temperature and moisture effects on greenhouse gas emissions from deep active-layer boreal soils

NASA Astrophysics Data System (ADS)

Bond-Lamberty, Ben; Smith, A. Peyton; Bailey, Vanessa

2016-12-01

Rapid climatic changes, rising air temperatures, and increased fires are expected to drive permafrost degradation and alter soil carbon (C) cycling in many high-latitude ecosystems. How these soils will respond to changes in their temperature, moisture, and overlying vegetation is uncertain but critical to understand given the large soil C stocks in these regions. We used a laboratory experiment to examine how temperature and moisture control CO2 and CH4 emissions from mineral soils sampled from the bottom of the annual active layer, i.e., directly above permafrost, in an Alaskan boreal forest. Gas emissions from 30 cores, subjected to two temperatures and either field moisture conditions or experimental drought, were tracked over a 100-day incubation; we also measured a variety of physical and chemical characteristics of the cores. Gravimetric water content was 0.31 ± 0.12 (unitless) at the beginning of the incubation; cores at field moisture were unchanged at the end, but drought cores had declined to 0.06 ± 0.04. Daily CO2 fluxes were positively correlated with incubation chamber temperature, core water content, and percent soil nitrogen. They also had a temperature sensitivity (Q10) of 1.3 and 1.9 for the field moisture and drought treatments, respectively. Daily CH4 emissions were most strongly correlated with percent nitrogen, but neither temperature nor water content was a significant first-order predictor of CH4 fluxes. The cumulative production of C from CO2 was over 6 orders of magnitude higher than that from CH4; cumulative CO2 was correlated with incubation temperature and moisture treatment, with drought cores producing 52-73 % lower C. Cumulative CH4 production was unaffected by any treatment. These results suggest that deep active-layer soils may be sensitive to changes in soil moisture under aerobic conditions, a critical factor as discontinuous permafrost thaws in interior Alaska. Deep but unfrozen high-latitude soils have been shown to be strongly affected by long-term experimental warming, and these results provide insight into their future dynamics and feedback potential with future climate change.
Core molecule dependence of energy migration in phenylacetylene nanostar dendrimers: Ab initio molecular orbital-configuration interaction based quantum master equation study

NASA Astrophysics Data System (ADS)

Kishi, Ryohei; Minami, Takuya; Fukui, Hitoshi; Takahashi, Hideaki; Nakano, Masayoshi

2008-06-01

The core molecule dependence of energy (exciton) migration in phenylacetylene nanostar dendrimers is investigated using the ab initio molecular orbital (MO)-configuration interaction based quantum master equation approach. We examine three kinds of core molecular species, i.e., benzene, anthracene, and pentacene, with different highest occupied MO-lowest unoccupied MO (HOMO-LUMO) gaps, which lead to different orbital interactions between the dendron parts and the core molecule. The nanostars bearing anthracene and pentacene cores are characterized by multistep exciton states with spatially well-segmented distributions: The exciton distributions of high-lying exciton states are spatially localized well in the periphery region, whereas those of low-lying exciton states are done in the core region. On the other hand, for the nanostar bearing benzene core, which also has multistep exciton states, the spatial exciton distributions of low-lying exciton states are delocalized over the dendron and the core regions. It is found that the former nanostars exhibit nearly complete exciton migration from the periphery to the core molecule in contrast to the latter one, in which significant exciton distribution remains in the dendron parts attached to the core after the exciton relaxation, although all these dendrimers exhibit fast exciton relaxation from the initially populated states. It is predicted from the analysis based on the MO correlation diagrams and the relative relaxation factor that the complete exciton migration to the core occurs not only when the HOMO-LUMO gap of the core molecule is nearly equal to that of the dendron parts attached to the core (anthracene case) but also when fairly smaller than that (pentacene case), whereas the complete migration is not achieved when the HOMO-LUMO gap of the core is larger than that of the dendron parts (benzene case). These results suggest that the fast and complete exciton migration of real dendrimers could be realized by adjusting the HOMO-LUMO gap of the core molecule to be smaller than that of dendron parts, although there exist more complicated relaxation processes as compared to simple dendritic aggregate models studied so far.
Modulating Emotional Experience Using Electrical Stimulation of the Medial-Prefrontal Cortex: A Preliminary tDCS-fMRI Study.

PubMed

Abend, Rany; Sar-El, Roy; Gonen, Tal; Jalon, Itamar; Vaisvaser, Sharon; Bar-Haim, Yair; Hendler, Talma

2018-05-09

Implicit regulation of emotions involves medial-prefrontal cortex (mPFC) regions exerting regulatory control over limbic structures. Diminished regulation relates to aberrant mPFC functionality and psychopathology. Establishing means of modulating mPFC functionality could benefit research on emotion and its dysregulation. Here, we tested the capacity of transcranial direct current stimulation (tDCS) targeting mPFC to modulate subjective emotional states by facilitating implicit emotion regulation. Stimulation was applied concurrently with functional magnetic resonance imaging to validate its neurobehavioral effect. Sixteen participants were each scanned twice, counterbalancing active and sham tDCS application, while undergoing negative mood induction (clips featuring negative vs. neutral contents). Effects of stimulation on emotional experience were assessed using subjective and neural measures. Subjectively, active stimulation led to significant reduction in reported intensity of experienced emotions to negatively valenced (p = 0.005) clips but not to neutral clips (p > 0.99). Active stimulation further mitigated a rise in stress levels from pre- to post-induction (sham: p = 0.004; active: p = 0.15). Neurally, stimulation increased activation in mPFC regions associated with implicit emotion regulation (ventromedial-prefrontal cortex; subgenual anterior-cingulate cortex, sgACC), and in ventral striatum, a core limbic structure (all ps < 0.05). Stimulation also altered functional connectivity (assessed using whole-brain psycho-physiological interaction) between these regions, and with additional limbic regions. Stimulation-induced sgACC activation correlated with reported emotion intensity and depressive symptoms (rs > 0.64, ps < 0.018), suggesting individual differences in stimulation responsivity. Results of this study indicate the potential capacity of tDCS to facilitate brain activation in mPFC regions underlying implicit regulation of emotion and accordingly modulate subjective emotional experiences. © 2018 International Neuromodulation Society.
The Chornobyl accident revisited, part II: The state of the nuclear fuel located within the Chornobyl Sarcophagus

DOE Office of Scientific and Technical Information (OSTI.GOV)

Borovol, A.A.; Sich, A.R.

1995-10-01

Approximately 135 tonnes of the 190.3-tonne initial core fuel load ({approx}71%) at Chornobyl Unit 4 melted and flowed into the lower regions of the reactor building to form various kinds of the now-solidified lava-like fuel-containing materials (LFCMs) or corium. The results of radiochemical analyses reveal that only 5% of the LFCM inventory of Ru-106 remains, whereas, surprisingly, 35% of the LFCM inventory of Cs-137 remains. Moreover, the results of these analyses support the fact that little if any of the 5020 tonnes of various materials (dropped from helicopters during the active phase of the accident in an attempt to smothermore » the burning graphite) ever made it into the core shaft, where the bulk of the core was located. The results appear to support earlier Western source-term estimates that significantly more volatile radionuclides may have been released as a result of the accident.« less
The Chornobyl accident revisited, Part II: The state of the nuclear fuel located within the Chornobyl sarcophagus

DOE Office of Scientific and Technical Information (OSTI.GOV)

Borovoi, A.A.; Sich, A.R.

1995-01-01

Approximately 135 tonnes of the 190.3-tonne initial core fuel load ({approx}71%) at Chernobyl Unit 4 melted and flowed into the lower regions of the reactor building to form various kinds of the now-solidified lava-like fuel-containing materials (LFCMs) or corium. The results of radiochemical analyses reveal that only 5% of the LFCM inventory of Ru-106 remains. whereas, surprisingly, 35% of the LFCM inventory of Cs-137 remains. Moreover, the results of these analyses support the fact that little if any of the 5020 tonnes of various materials (dropped from helicopters during the active phase of the accident in an attempt to smothermore » the burning graphite) ever made it into the core shaft, where the bulk of the core was located. The results appear to support earlier Western source-term estimates that significantly more volatile radionuclides may have been released as a result of the accident. 37 refs., 13 figs., 7 tabs.« less
Natural Environmental Hazards Reflected in High-Altitude Patagonian Lake Sediments (lake Caviahue, Argentina)

NASA Astrophysics Data System (ADS)

Müller, Anne; Scharf, Burkhard; von Tümpling, Wolf; Pirrung, Michael

2009-03-01

Two 6-m long sediment cores drilled in the two basins of Lake Caviahue give new evidence of the impact of natural hazards such as ash fallouts linked to nearby volcanic eruptions in the ecologically sensitive environment of the high-altitude region of the Argentinan Patagonian Andes. The two cores show distinct signals of changes in autochthonous productivity and terrigenous input into the lake from ash fallout as well as from river load and shore erosion. Multiproxy records of the sediments indicate whether these changes can be related to volcanic activity. High values of magnetic susceptibility in the cores reflect periods of basaltic ash fallouts during eruptions of the nearby Copahue Volcano. The southern basin is located in the prevalent direction of ash fallouts and has been affected by these volcanic inputs more intensely than the northern basin of the lake. In contrast, sedimentation and authochthonous productivity in the northern basin are strongly affected by fluvial inputs such as suspended river load and acidic stream waters.
Natural Environmental Hazards Reflected in High-Altitude Patagonian Lake Sediments (Lake Caviahue, Argentina)

NASA Astrophysics Data System (ADS)

Mueller, A.; Pirrung, M.; Scharf, B.; von Tuempling, W.

2007-05-01

Two 6-m long sediment cores drilled in the two basins of Lake Caviahue give new evidence of the impact of natural hazards such as ash fallouts linked to nearby volcanic eruptions in the ecologically sensitive environment of the high-altitude region of the Argentinan Patagonian Andes. The two cores show distinct signals of changes in autochthonous productivity and terrigenous input into the lake from ash fallout, river load and shore erosion. Multiproxy records of the sediments indicate whether these changes can be related to volcanic activity. High values of magnetic susceptibility in the cores reflect periods of basaltic ash fallouts during eruptions of the nearby Copahue volcano. The southern basin is located in the prevalent direction of ash fallouts and has been affected by these volcanic inputs more intensely than the northern basin of the lake. In contrast, sedimentation and authochthonous productivity in the northern basin are strongly affected by fluvial inputs such as suspended river load and acidic stream waters.
Subsurface Resistivity Structures in and Around Strike-Slip Faults - Electromagnetic Surveys and Drillings Across Active Faults in Central Japan -

NASA Astrophysics Data System (ADS)

Omura, K.; Ikeda, R.; Iio, Y.; Matsuda, T.

2005-12-01

Electrical resistivity is important property to investigate the structure of active faults. Pore fluid affect seriously the electrical properties of rocks, subsurface electrical resistivity can be an indicator of the existence of fluid and distribution of pores. Fracture zone of fault is expected to have low resistivity due to high porosity and small gain size. Especially, strike-slip type fault has nearly vertical fracture zone and the fracture zone would be detected by an electrical survey across the fault. We performed electromagnetic survey across the strike-slip active faults in central Japan. At the same faults, we also drilled borehole into the fault and did downhole logging in the borehole. We applied MT or CSAMT methods onto 5 faults: Nojima fault which appeared on the surface by the 1995 Great Kobe earthquake (M=7.2), western Nagano Ohtaki area(1984 Nagano-ken seibu earthquake (M=6.8), the fault did not appeared on the surface), Neodani fault which appeared by the 1891 Nobi earthquake (M=8.0), Atera fault which seemed to be dislocated by the 1586 Tensyo earthquake (M=7.9), Gofukuji fault that is considered to have activated about 1200 years ago. The sampling frequencies of electrical and magnetic field were 2 - 1024Hz (10 frequencies) for CSAMT survey and 0.00055 - 384Hz (40 frequencies) for MT survey. The electromagnetic data were processed by standard method and inverted to 2-D resistivity structure along transects of the faults. Results of the survey were compared with downhole electrical logging data and observational descriptions of drilled cores. Fault plane of each fault were recognized as low resistivity region or boundary between relatively low and high resistivity region, except for Gofukuji fault. As for Gofukuji fault, fault was located in relatively high resistivity region. During very long elapsed time from the last earthquake, the properties of fracture zone of Gofukuji fault might changed from low resistivity properties as observed for other faults. Downhole electrical logging data were consistent to values of resistivity estimated by electromagnetic survey for each fault. The existence of relatively low and high resistivity regions in 2-D structure from electromagnetic survey was observed again by downhole logging at the correspondent portion in the borehole. Cores recovered from depthes where the electrical logging showed low resistivity were hardly fractured and altered from host rock which showed high resistivity. Results of electromagnetic survey, downhole electrical logging and observation of drilled cores were consistent to each other. In present case, electromagnetic survey is useful to explore the properties of fault fracture zone. In the further investigations, it is important to explore relationships among features of resistivity structure and geological and geophysical situations of the faults.
Modelling the Centers of Galaxies

NASA Technical Reports Server (NTRS)

Smith, B. F.; Miller, R. H.; Young, Richard E. (Technical Monitor)

1997-01-01

The key to studying central regions by means of nobody numerical experiments is to concentrate on the central few parsecs of a galaxy, replacing the remainder of the galaxy by a suitable boundary condition, rather after the manner in which stellar interiors can be studied without a detailed stellar atmosphere by replacing the atmosphere with a boundary condition. Replacements must be carefully designed because the long range gravitational force means that the core region is sensitive to mass outside that region and because particles can exchange between the outer galaxy and the core region. We use periodic boundary conditions, coupled with an iterative procedure to generate initial particle loads in isothermal equilibrium. Angular momentum conservation is ensured for problems including systematic rotation by a circular reflecting boundary and by integrating in a frame that rotates with the mean flow. Mass beyond the boundary contributes to the gravitational potential, but does not participate in the dynamics. A symplectic integration scheme has been developed for rotating coordinate systems. This combination works well, leading to robust configurations. Some preliminary results with this combination show that: (1) Rotating systems are extremely sensitive to non-axisymmetric external potentials, and (2) that a second core, orbiting near the main core (like the M31 second core system), shows extremely rapid orbital decay. The experimental setups will be discussed, along with preliminary results.
Gas hydrates and active mud volcanism on the South Shetland continental margin, Antarctic Peninsula

NASA Astrophysics Data System (ADS)

Tinivella, U.; Accaino, F.; Della Vedova, B.

2008-04-01

During the Antarctic summer of 2003 2004, new geophysical data were acquired from aboard the R/V OGS Explora in the BSR-rich area discovered in 1996 1997 along the South Shetland continental margin off the Antarctic Peninsula. The objective of the research program, supported by the Italian National Antarctic Program (PNRA), was to verify the existence of a potential gas hydrate reservoir and to reconstruct the tectonic setting of the margin, which probably controls the extent and character of the diffused and discontinuous bottom simulating reflections. The new dataset, i.e. multibeam bathymetry, seismic profiles (airgun and chirp), and two gravity cores analysed by computer-aided tomography as well as for gas composition and content, clearly shows active mud volcanism sustained by hydrocarbon venting in the region: several vents, located mainly close to mud volcanoes, were imaged during the cruise and their occurrence identified in the sediment samples. Mud volcanoes, vents and recent slides border the gas hydrate reservoir discovered in 1996 1997. The cores are composed of stiff silty mud. In core GC01, collected in the proximity of a mud volcano ridge, the following gases were identified (maximum contents in brackets): methane (46 μg/kg), pentane (45), ethane (35), propane (34), hexane (29) and butane (28). In core GC02, collected on the flank of the Vualt mud volcano, the corresponding data are methane (0 μg/kg), pentane (45), ethane (22), propane (0), hexane (27) and butane (25).
A dimer of the lymphoid protein RAG1 recognizes the recombination signal sequence and the complex stably incorporates the high mobility group protein HMG2.

PubMed

Rodgers, K K; Villey, I J; Ptaszek, L; Corbett, E; Schatz, D G; Coleman, J E

1999-07-15

RAG1 and RAG2 are the two lymphoid-specific proteins required for the cleavage of DNA sequences known as the recombination signal sequences (RSSs) flanking V, D or J regions of the antigen-binding genes. Previous studies have shown that RAG1 alone is capable of binding to the RSS, whereas RAG2 only binds as a RAG1/RAG2 complex. We have expressed recombinant core RAG1 (amino acids 384-1008) in Escherichia coli and demonstrated catalytic activity when combined with RAG2. This protein was then used to determine its oligomeric forms and the dissociation constant of binding to the RSS. Electrophoretic mobility shift assays show that up to three oligomeric complexes of core RAG1 form with a single RSS. Core RAG1 was found to exist as a dimer both when free in solution and as the minimal species bound to the RSS. Competition assays show that RAG1 recognizes both the conserved nonamer and heptamer sequences of the RSS. Zinc analysis shows the core to contain two zinc ions. The purified RAG1 protein overexpressed in E.coli exhibited the expected cleavage activity when combined with RAG2 purified from transfected 293T cells. The high mobility group protein HMG2 is stably incorporated into the recombinant RAG1/RSS complex and can increase the affinity of RAG1 for the RSS in the absence of RAG2.
Cores Of Recurrent Events (CORE) | Informatics Technology for Cancer Research (ITCR)

Cancer.gov

CORE is a statistically supported computational method for finding recurrently targeted regions in massive collections of genomic intervals, such as those arising from DNA copy number analysis of single tumor cells or bulk tumor tissues.
An fMRI study of caring vs self-focus during induced compassion and pride.

PubMed

Simon-Thomas, Emiliana R; Godzik, Jakub; Castle, Elizabeth; Antonenko, Olga; Ponz, Aurelie; Kogan, Aleksander; Keltner, Dacher J

2012-08-01

This study examined neural activation during the experience of compassion, an emotion that orients people toward vulnerable others and prompts caregiving, and pride, a self-focused emotion that signals individual strength and heightened status. Functional magnetic resonance images (fMRI) were acquired as participants viewed 55 s continuous sequences of slides to induce either compassion or pride, presented in alternation with sequences of neutral slides. Emotion self-report data were collected after each slide condition within the fMRI scanner. Compassion induction was associated with activation in the midbrain periaqueductal gray (PAG), a region that is activated during pain and the perception of others' pain, and that has been implicated in parental nurturance behaviors. Pride induction engaged the posterior medial cortex, a region that has been associated with self-referent processing. Self-reports of compassion experience were correlated with increased activation in a region near the PAG, and in the right inferior frontal gyrus (IFG). Self-reports of pride experience, in contrast, were correlated with reduced activation in the IFG and the anterior insula. These results provide preliminary evidence towards understanding the neural correlates of important interpersonal dimensions of compassion and pride. Caring (compassion) and self-focus (pride) may represent core appraisals that differentiate the response profiles of many emotions.
An fMRI study of caring vs self-focus during induced compassion and pride

PubMed Central

Godzik, Jakub; Castle, Elizabeth; Antonenko, Olga; Ponz, Aurelie; Kogan, Aleksander; Keltner, Dacher J.

2012-01-01

This study examined neural activation during the experience of compassion, an emotion that orients people toward vulnerable others and prompts caregiving, and pride, a self-focused emotion that signals individual strength and heightened status. Functional magnetic resonance images (fMRI) were acquired as participants viewed 55 s continuous sequences of slides to induce either compassion or pride, presented in alternation with sequences of neutral slides. Emotion self-report data were collected after each slide condition within the fMRI scanner. Compassion induction was associated with activation in the midbrain periaqueductal gray (PAG), a region that is activated during pain and the perception of others’ pain, and that has been implicated in parental nurturance behaviors. Pride induction engaged the posterior medial cortex, a region that has been associated with self-referent processing. Self-reports of compassion experience were correlated with increased activation in a region near the PAG, and in the right inferior frontal gyrus (IFG). Self-reports of pride experience, in contrast, were correlated with reduced activation in the IFG and the anterior insula. These results provide preliminary evidence towards understanding the neural correlates of important interpersonal dimensions of compassion and pride. Caring (compassion) and self-focus (pride) may represent core appraisals that differentiate the response profiles of many emotions. PMID:21896494
Age-related differences in the brain areas outside the classical language areas among adults using category decision task.

PubMed

Cho, Yong Won; Song, Hui-Jin; Lee, Jae Jun; Lee, Joo Hwa; Lee, Hui Joong; Yi, Sang Doe; Chang, Hyuk Won; Berl, Madison M; Gaillard, William D; Chang, Yongmin

2012-03-01

Older adults perform much like younger adults on language. This similar level of performance, however, may come about through different underlying brain processes. In the present study, we evaluated age-related differences in the brain areas outside the typical language areas among adults using a category decision task. Our results showed that similar activation patterns were found in classical language processing areas across the three age groups although regional lateralization indices in Broca's and Wernicke's areas decreased with age. The greatest differences, however, among the three groups were found primarily in the brain areas not associated with core language functioning including the hippocampus, middle frontal gyrus, ventromedial frontal cortex, medial superior parietal cortex and posterior cingulate cortex. Therefore, the non-classical language areas may exhibit an age-related difference between three age groups while the subjects show a similar activation pattern in the core, primary language processing during a semantic decision task. Copyright Â© 2012 Elsevier Inc. All rights reserved.
The last Deglaciation in the Mediterranean region: a multi-archives synthesis

NASA Astrophysics Data System (ADS)

Bazin, Lucie; Siani, Giuseppe; Landais, Amaelle; Bassinot, Frank; Genty, Dominique; Govin, Aline; Michel, Elisabeth; Nomade, Sebastien; Waelbroeck, Claire

2016-04-01

Multiple proxies record past climatic changes in different climate archives. These proxies are influenced by different component of the climate system and bring complementary information on past climate variability. The major limitation when combining proxies from different archives comes from the coherency of their chronologies. Indeed, each climate archives possess their own dating methods, not necessarily coherent with each other's. Consequently, when we want to assess the latitudinal changes and mechanisms behind a climate event, we often have to rely on assumptions of synchronisation between the different archives, such as synchronous temperature changes during warming events (Austin and Hibbert 2010). Recently, a dating method originally developed to produce coherent chronologies for ice cores (Datice,Lemieux-Dudon et al., 2010) has been adapted in order to integrate different climate archives (ice cores, sediment cores and speleothems (Lemieux-Dudon et al., 2015, Bazin et al., in prep)). In this presentation we present the validation of this multi-archives dating tool with a first application covering the last Deglaciation in the Mediterranean region. For this experiment, we consider the records from Monticchio, the MD90-917, Tenaghi Philippon and Lake Orhid sediment cores as well as continuous speleothems from Sofular, Soreq and La Mine caves. Using the Datice dating tool, and with the identification of common tephra layers between the cores considered, we are able to produce a multi-archives coherent chronology for this region, independently of any climatic assumption. Using this common chronological framework, we show that the usual climatic synchronisation assumptions are not valid over this region for the last glacial-interglacial transition. Finally, we compare our coherent Mediterranean chronology with Greenland ice core records in order to discuss the sequence of events of the last Deglaciation between these two regions.
Geoacoustic Characterization of the Mud Drape at the New England Mud Patch

NASA Astrophysics Data System (ADS)

Reed, A. H.

2016-02-01

The New England Mud Patch is an extensive deposit of fine-grained sediments that extends from an area south of Cape Cod, MA to south of Montauk Point Long Island, NY out on the continental shelf in water depths of 60 to 90 meters. The mud patch has a remarkable accumulation of up to a 13 meter thick sequence of mud that overlays a transgressive surface of Pleistocene Age and then thins out on the periphery where surficial sediments convert from mud to sand and sand/gravel. The deposit likely accumulated in this region due to the coalescing of shelf currents that had oppositional flow. This work focuses on a section of the mud patch that is centered over the thickest portion of mud and extends east-west for 30 km and north south for 10 km. Gravity cores were collected throughout this region and the cores penetrated the upper 2-4 m of mud at 28 different sites with multiple cores collected in several locations. The mud thickness in these regions exceeded the core barrel length, therefore the cores did not penetrate into the basal sand sediment layer, a relict transgressional horizon, which displays prominently in the acoustic data for this selected region. These cores were evaluated for compressional sound speed (averaging 1480 m/s) and density (1580 kg/m3) and found to be largely homogeneous and similar throughout the study area. The largest source of inhomogeneity was due to dispersed shell hash and disarticulated bivalves, but these inclusions represent minor components in the total sediment volume. The overlying sediment that characterizes the New England Mud Patch can be readily classified as mud, silty mud, or sandy-silty mud. This fine-grained sediment deposit reflects upon the low-energy nature of the hydrodynamics within this region.

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